BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028867
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P24805|TSJT1_TOBAC Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1
Length = 149
Score = 117 bits (292), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/150 (40%), Positives = 87/150 (58%), Gaps = 2/150 (1%)
Query: 1 MLAIFHKAFANPPEELHSPASQKCSKRPKLPEDTLSDFLSRHSDNTFSMNFGHAAVLAYV 60
MLA+F ++ PP EL P + K K E+ F + D+TF F +
Sbjct: 1 MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREEIAESFKTWKQDSTFYHLFNGNFMAFSH 60
Query: 61 PPHSPLTKDRRLFCGFEDIYCLFMGSLNNLCSLIRQYGLSKGTDEAMFVIEAYRTLRDRG 120
+PL R +D++C+F G+L+N L + YGLS+ EAM ++EAY+ LRDR
Sbjct: 61 GNENPLQP--RSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRA 118
Query: 121 PYPADQVVKDLDGSFAFVVYDSKAGTVFTA 150
PYP DQV+K+L+G FAF+++DSKA T+F A
Sbjct: 119 PYPPDQVIKELEGKFAFILFDSKASTLFLA 148
>sp|Q54MB4|ASNS_DICDI Probable asparagine synthetase [glutamine-hydrolyzing]
OS=Dictyostelium discoideum GN=asns PE=1 SV=1
Length = 557
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 124 ADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCA 183
D V LDG FAFVVY+ KA + A G V LY G DGS+ S +++ IK+ C
Sbjct: 113 GDDFVHMLDGDFAFVVYNKKANSFLAARDPIGVVPLYIGWHKDGSIWFSSEMKAIKDDCY 172
Query: 184 KSFAPFPQGKLNFFS 198
K F PFP G ++FS
Sbjct: 173 K-FQPFPPG--HYFS 184
>sp|Q10MX3|ASNS1_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Oryza sativa
subsp. japonica GN=Os03g0291500 PE=2 SV=1
Length = 604
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 50 NFGHAAVLAYVPPHSPLTKDRRLFCGFEDIYCLFMGSLNNLCSLIRQYG----LSKGTDE 105
NF LA V SPL+ D+ L+ I + G + N + +Q+ S G+D
Sbjct: 44 NFLAQQRLAIV---SPLSGDQPLYNADRTIVVVANGEIYNHKKIRKQFASKHTFSTGSD- 99
Query: 106 AMFVIEAYRTLRDRGPYPADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAA 165
+I Y + V LDG FAFV+YD++ T A + G LY G +
Sbjct: 100 CEVIIPLYEEY-------GEDFVDMLDGVFAFVLYDTRTKTYMAARDAIGVNPLYIGRGS 152
Query: 166 DGSVVISDDLEVIKEGCAKSFAPFPQGKL 194
DG+V IS +++ + E C + F FP G L
Sbjct: 153 DGAVWISSEMKALNEDCVE-FEIFPPGHL 180
>sp|O24661|ASNS_TRIVS Asparagine synthetase [glutamine-hydrolyzing] OS=Triphysaria
versicolor GN=AS PE=2 SV=3
Length = 586
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 16/135 (11%)
Query: 65 PLTKDRRLFCGFEDIYCLFMGSLNN---LCSLIRQYGLSKGTDEAMF--VIEAYRTLRDR 119
P + D+ LF + I G + N L +L+ + G+D + + E Y
Sbjct: 56 PASGDQPLFNEDKRIAVTVNGEIYNHEELRALLPNHKFRTGSDCDVIAHLYEEY------ 109
Query: 120 GPYPADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIK 179
+ V+ LDG F+FV+ DS+ T A + G LY G DGSV IS +L+ +
Sbjct: 110 ----GENFVEMLDGMFSFVLLDSRDNTFIAARDAFGITSLYIGWGLDGSVWISSELKGLH 165
Query: 180 EGCAKSFAPFPQGKL 194
+ C ++F FP G +
Sbjct: 166 DEC-ENFEVFPPGHV 179
>sp|P49092|ASNS1_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Lotus japonicus
GN=AS1 PE=2 SV=2
Length = 586
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 131 LDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCAKSFAPFP 190
LDG F+FV+ D++ T A + G LY G DGSV IS +++ + + C + F FP
Sbjct: 117 LDGIFSFVLLDTRDNTFIVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDC-EHFEVFP 175
Query: 191 QGKL 194
G L
Sbjct: 176 PGHL 179
>sp|Q43011|ASNS2_ORYSJ Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Oryza sativa
subsp. japonica GN=Os06g0265000 PE=2 SV=3
Length = 591
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 124 ADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCA 183
++ V LDG FAFV+ D++ + A + G LY G DGSV S +++ + + C
Sbjct: 110 GEEFVDMLDGMFAFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDCE 169
Query: 184 KSFAPFPQGKL 194
+ F FP G L
Sbjct: 170 R-FISFPPGHL 179
>sp|P49094|ASNS_MAIZE Asparagine synthetase [glutamine-hydrolyzing] OS=Zea mays GN=ASN1
PE=2 SV=2
Length = 586
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 124 ADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCA 183
++ V LDG F+FV+ D++ + A + G LY G DGSV S +++ + + C
Sbjct: 110 GEEFVDMLDGMFSFVLLDTRDKSFIAARDAIGICPLYMGWGLDGSVWFSSEMKALSDDCE 169
Query: 184 KSFAPFPQGKL 194
+ F FP G L
Sbjct: 170 R-FITFPPGHL 179
>sp|P49091|ASNS_BRAOL Asparagine synthetase [glutamine-hydrolyzing] OS=Brassica oleracea
PE=2 SV=2
Length = 586
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 124 ADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCA 183
+ V LDG F+FV+ D++ + A + G LY G DGS+ +S +++ + E C
Sbjct: 110 GENFVDMLDGIFSFVLLDTRDNSFMVARDAVGVTSLYIGWGLDGSLWVSSEMKGLHEDC- 168
Query: 184 KSFAPFPQGKL 194
+ F FP G L
Sbjct: 169 EHFEAFPPGHL 179
>sp|P19251|ASNS1_PEA Asparagine synthetase, nodule [glutamine-hydrolyzing] OS=Pisum
sativum GN=AS1 PE=2 SV=3
Length = 586
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 124 ADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCA 183
+ V LDG F+FV+ D++ + A + G LY G DGSV I+ +L+ + + C
Sbjct: 110 GENFVDMLDGIFSFVLLDTRDNSFIVARDAIGVTSLYIGWGLDGSVWIASELKGLNDEC- 168
Query: 184 KSFAPFPQGKL 194
+ F FP G L
Sbjct: 169 EHFEVFPPGHL 179
>sp|P49093|ASNS2_LOTJA Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Lotus japonicus
GN=AS2 PE=2 SV=2
Length = 586
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 124 ADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCA 183
+ V LDG F+FV+ D++ + A + G LY G DGSV I+ +L+ + + C
Sbjct: 110 GENFVDMLDGIFSFVLLDTRDNSFLVARDAIGVTSLYIGYGLDGSVWIASELKGLNDDC- 168
Query: 184 KSFAPFPQGKL 194
+ F FP G L
Sbjct: 169 EHFELFPPGHL 179
>sp|O24338|ASNS_SANAU Asparagine synthetase [glutamine-hydrolyzing] OS=Sandersonia
aurantiaca GN=AND1 PE=2 SV=3
Length = 525
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 131 LDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCAKSFAPFP 190
LDG F+FV+ DS+ + A + G LY G DGSV IS +++ + + C + F FP
Sbjct: 117 LDGIFSFVLLDSRNNSFVAARDAIGVTPLYIGWGLDGSVWISSEMKGLNDDC-EHFKFFP 175
Query: 191 QGKL 194
G L
Sbjct: 176 PGHL 179
>sp|P49078|ASNS1_ARATH Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Arabidopsis
thaliana GN=ASN1 PE=2 SV=2
Length = 584
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 128 VKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCAKSFA 187
V LDG F+FV+ D++ + A + G LY G DGSV IS +++ + + C + F
Sbjct: 114 VDMLDGIFSFVLLDTRDNSFMVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDC-EHFE 172
Query: 188 PFPQGKLNFFS 198
FP G +F+S
Sbjct: 173 TFPPG--HFYS 181
>sp|Q9LV77|ASNS2_ARATH Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Arabidopsis
thaliana GN=ASN2 PE=2 SV=1
Length = 578
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 124 ADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCA 183
++ + LDG FAFV+ D++ + A + G LY G DGSV + +++ + + C
Sbjct: 110 GEEFIDMLDGMFAFVLLDTRDKSFIAARDAIGITPLYIGWGLDGSVWFASEMKALSDDC- 168
Query: 184 KSFAPFPQGKL 194
+ F FP G +
Sbjct: 169 EQFMSFPPGHI 179
>sp|P19252|ASNS2_PEA Asparagine synthetase, root [glutamine-hydrolyzing] OS=Pisum
sativum GN=AS2 PE=2 SV=3
Length = 583
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 124 ADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCA 183
+ V LDG F+FV D++ + A + G LY G DGSV IS +++ + + C
Sbjct: 110 GEDFVDMLDGIFSFVPLDTRDNSYIVARDAIGVTSLYIGWGLDGSVWISSEMKGLNDDC- 168
Query: 184 KSFAPFPQGKL 194
+ F FP G L
Sbjct: 169 EHFECFPPGHL 179
>sp|Q9LFU1|ASNS3_ARATH Asparagine synthetase [glutamine-hydrolyzing] 3 OS=Arabidopsis
thaliana GN=ASN3 PE=2 SV=1
Length = 578
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 124 ADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCA 183
++ V LDG FAFV+ D++ + A + G LY G DGSV + +++ + + C
Sbjct: 110 GEEFVDMLDGMFAFVLLDTRDKSFIAARDAIGITPLYIGWGLDGSVWFASEMKALSDDC- 168
Query: 184 KSFAPFPQGKL 194
+ F FP G +
Sbjct: 169 EQFMCFPPGHI 179
>sp|P31752|ASNS_ASPOF Asparagine synthetase [glutamine-hydrolyzing] OS=Asparagus
officinalis PE=2 SV=2
Length = 590
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 128 VKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCAKSFA 187
V LDG F+FV+ D++ A + G LY G DGSV +S +++ + + C + F
Sbjct: 114 VDMLDGMFSFVLLDTRNNCFVAARDAVGITPLYIGWGLDGSVWLSSEMKGLNDDC-EHFE 172
Query: 188 PFPQGKL 194
FP G L
Sbjct: 173 VFPPGNL 179
>sp|P22106|ASNB_ECOLI Asparagine synthetase B [glutamine-hydrolyzing] OS=Escherichia coli
(strain K12) GN=asnB PE=1 SV=3
Length = 554
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 85 GSLNNLCSLIRQYG----LSKGTD-EAMFVIEAYRTLRDRGPYPADQVVKDLDGSFAFVV 139
G + N +L +YG G+D E + + +++GP + + DL G FAF +
Sbjct: 76 GEIYNHQALRAEYGDRYQFQTGSDCEVILAL-----YQEKGP----EFLDDLQGMFAFAL 126
Query: 140 YDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDLEVIKEGCAKSFAPFPQG 192
YDS+ G + LY G G + ++ +++ + C ++ FP G
Sbjct: 127 YDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPVC-RTIKEFPAG 178
>sp|P49090|ASNS2_YEAST Asparagine synthetase [glutamine-hydrolyzing] 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ASN2 PE=1
SV=2
Length = 572
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 129 KDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADG--SVVISDDLEVIKEGCAKSF 186
K LDG FAF +YDSK + A G V LY G ++ +V + +L+ + + C S
Sbjct: 114 KYLDGMFAFCLYDSKKDRIVAARDPIGVVTLYMGRSSQSPETVYFASELKCLTDVC-DSI 172
Query: 187 APFPQGKL 194
FP G +
Sbjct: 173 ISFPPGHV 180
>sp|O43663|PRC1_HUMAN Protein regulator of cytokinesis 1 OS=Homo sapiens GN=PRC1 PE=1
SV=2
Length = 620
Score = 35.4 bits (80), Expect = 0.26, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 63 HSPLTK-DRRLFCGFEDIYCLFMGSLNNLCSLIRQYGLSKGTDEAMFVIEAYRT----LR 117
H+P T +R + C ED +CL + ++ L L+RQ + K +EA V E RT L
Sbjct: 190 HTPDTSFERDVVCEDEDAFCLSLENIATLQKLLRQLEMQKSQNEA--VCEGLRTQIRELW 247
Query: 118 DRGPYPADQ 126
DR P ++
Sbjct: 248 DRLQIPEEE 256
>sp|P78753|ASNS_SCHPO Probable asparagine synthetase [glutamine-hydrolyzing]
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=asn1 PE=1 SV=3
Length = 557
Score = 33.9 bits (76), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 117 RDRGPYPADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADG--SVVISDD 174
R+ GP A+ LDG F++V+YD V A G LY G ++D + + +
Sbjct: 108 REHGPACANM----LDGMFSWVLYDQDKDKVVAARDPIGITTLYQGFSSDSPDTAYFASE 163
Query: 175 LEVIKEGCAKSFAPFPQG 192
L+ + C K A FP G
Sbjct: 164 LKALHPVCDKIIA-FPPG 180
>sp|O81117|C94A1_VICSA Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2
Length = 514
Score = 33.5 bits (75), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 119 RGPYPADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWGIAADGSVVISDDL--- 175
+ P +++V +L +VYD V+T ++LY + D ++DD+
Sbjct: 333 KNPRVEEEIVNELSKKSELMVYDEVKEMVYTHAALSESMRLYPPVPMDSKEAVNDDVLPD 392
Query: 176 -EVIKEGCAKSFAPFPQGKL 194
V+K+G ++ + G++
Sbjct: 393 GWVVKKGTIVTYHVYAMGRM 412
>sp|P49089|ASNS1_YEAST Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ASN1 PE=1
SV=2
Length = 572
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 12/85 (14%)
Query: 129 KDLDGSFAFVVYDSKAGTVFTALGSDGGVKLYWG--IAADGSVVISDDLEVIKEGCAKSF 186
K LDG FA+ +YD+K + A G LY G A+ +V + +L+ + + C +
Sbjct: 114 KYLDGMFAWTLYDAKQDRIVAARDPIGITTLYMGRSSASPKTVYFASELKCLTDDC-DTI 172
Query: 187 APFPQGKL---------NFFSHYWL 202
FP G + +F+ WL
Sbjct: 173 TAFPPGHVYDSKTDKITRYFTPDWL 197
>sp|Q04489|ASND1_YEAST Asparagine synthetase domain-containing protein YML096W
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=YML096W PE=1 SV=1
Length = 525
Score = 31.2 bits (69), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/74 (20%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 99 LSKGTDEAMFVIEAYRTLRDRGPYPADQVVKDLDGSFAFVVYDSKAGTVFTALGSDGGVK 158
+S+G ++++++ + L++ G D V+K L+G +A+ +YD + ++ G
Sbjct: 102 ISQGDNDSLYIASMLQNLKE-GMGVID-VIKSLEGEYAYTIYDVNSSKLYFGRDPIGRRS 159
Query: 159 LYWGIAADGSVVIS 172
L + + D + ++
Sbjct: 160 LSYSVTPDNELYVA 173
>sp|Q58456|ASNH2_METJA Putative asparagine synthetase [glutamine-hydrolyzing] 2
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1056
PE=3 SV=3
Length = 515
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 78 DIYCLFMGSLNNLCSLIRQYGLSK--GTDEAMFVIEAYRTLRDRGPYPADQVVKDLDGSF 135
DI ++ G + N L ++ L GTD + +++ Y L VK+ +G +
Sbjct: 86 DIIIVYNGEIYNYLELKEKFNLETETGTDTEV-ILKLYNKL-------GFDCVKEFNGMW 137
Query: 136 AFVVYDSKAGTVFTA 150
AF ++D K G +F +
Sbjct: 138 AFCIFDKKKGLIFCS 152
>sp|A8BFN4|OGT1_GIAIC UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
OS=Giardia intestinalis (strain ATCC 50803 / WB clone C6)
GN=GL50803_12081 PE=1 SV=1
Length = 1480
Score = 30.4 bits (67), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 7/62 (11%)
Query: 72 LFCGFEDIYCLFMGSLNNLCSLIRQ-----YGLSKGTDEAMFVIEAYRTLRDRGPYPADQ 126
LFC F +Y MG+L + +L+R Y L K + IEA+ R + P D+
Sbjct: 1263 LFCTFNQVYKFDMGTLGIIAALLRSVPNAYYALLKFPPASQLHIEAF--FRHKAPDILDR 1320
Query: 127 VV 128
V+
Sbjct: 1321 VI 1322
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.139 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,489,699
Number of Sequences: 539616
Number of extensions: 3383425
Number of successful extensions: 7465
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 7436
Number of HSP's gapped (non-prelim): 84
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)