Citrus Sinensis ID: 028868
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 202 | 2.2.26 [Sep-21-2011] | |||||||
| P50165 | 268 | Tropinone reductase homol | N/A | no | 0.935 | 0.705 | 0.634 | 1e-65 | |
| Q9ASX2 | 266 | Tropinone reductase homol | no | no | 0.920 | 0.699 | 0.623 | 2e-63 | |
| P50162 | 273 | Tropinone reductase 1 OS= | N/A | no | 0.930 | 0.688 | 0.590 | 1e-62 | |
| P50164 | 260 | Tropinone reductase 2 OS= | N/A | no | 0.930 | 0.723 | 0.601 | 3e-61 | |
| P50163 | 260 | Tropinone reductase 2 OS= | N/A | no | 0.930 | 0.723 | 0.601 | 7e-61 | |
| Q8SPU8 | 279 | Dehydrogenase/reductase S | yes | no | 0.905 | 0.655 | 0.383 | 6e-26 | |
| Q8VID1 | 279 | Dehydrogenase/reductase S | yes | no | 0.900 | 0.652 | 0.396 | 5e-25 | |
| Q99LB2 | 279 | Dehydrogenase/reductase S | yes | no | 0.900 | 0.652 | 0.402 | 5e-25 | |
| Q8WNV7 | 279 | Dehydrogenase/reductase S | yes | no | 0.905 | 0.655 | 0.367 | 2e-24 | |
| Q9BTZ2 | 278 | Dehydrogenase/reductase S | yes | no | 0.905 | 0.658 | 0.372 | 5e-24 |
| >sp|P50165|TRNH_DATST Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 249 bits (635), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/189 (63%), Positives = 145/189 (76%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGGTRGIG+A VEELA FGA V+TCSR+Q +LD L +W+ KGFKV+G VCD+SS
Sbjct: 18 MTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSS 77
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
QR+ L+E+VTS F GKLNILINNA K + TAED S + TNFE+ ++L QLA
Sbjct: 78 ISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLA 137
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASGN SIVF SS GV +P S+Y A KGA+NQ+TK+LACEWAKD+IR N VAP
Sbjct: 138 HPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAP 197
Query: 181 WVIKTSMIK 189
W+I T +I+
Sbjct: 198 WIINTPIIE 206
|
Datura stramonium (taxid: 4076) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: - |
| >sp|Q9ASX2|TRNH1_ARATH Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 241 bits (616), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 141/186 (75%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+ L +W+ KGF+VTGSVCD S R
Sbjct: 16 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 75
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+REKL++TV+S+F GKL+ILINN KPT+D TAED S STN ES +HLSQLAH
Sbjct: 76 PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 135
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL KASG G+I+F+SS+ GV S+Y A KGA+NQL +NLACEWA D IR N VAP
Sbjct: 136 PLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPA 195
Query: 182 VIKTSM 187
VI T +
Sbjct: 196 VIATPL 201
|
Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: - |
| >sp|P50162|TRN1_DATST Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 144/188 (76%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTGG++GIG+A VEELA GA V+TCSRN+ ELD L W+ KG V GSVCDL SR
Sbjct: 23 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR 82
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+R+KL++TV +F GKLNIL+NNA + K D T +D + + TNFE+ +HLSQ+A+
Sbjct: 83 TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY 142
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL KAS NG+++F+SS+ G +PSVSLY A KGA+NQ+TK+LACEWAKDNIR N+VAP
Sbjct: 143 PLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPG 202
Query: 182 VIKTSMIK 189
VI T +++
Sbjct: 203 VILTPLVE 210
|
Catalyzes the stereospecific reduction of tropinone to tropine. Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 0 EC: 6 |
| >sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (598), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 139/188 (73%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTGG+RGIG+ VEELA GA V+TCSRNQ ELD L +W++KGF V SVCDLSSR
Sbjct: 11 TALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSR 70
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+RE+ ++TV++ F GKLNIL+NNA I K D T ED S + S NFE+ +HLS LAH
Sbjct: 71 SEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAH 130
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P KAS G++VFISS+ G +P ++YGA KGAM+QLT+ LA EWAKDNIR N V P
Sbjct: 131 PFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPG 190
Query: 182 VIKTSMIK 189
VI TSM++
Sbjct: 191 VIATSMVE 198
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Catalyzes the stereospecific reduction of tropinone to pseudotropine. Hyoscyamus niger (taxid: 4079) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 6 |
| >sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 233 bits (594), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 139/188 (73%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTGG+RGIG+ VEELA GA V+TCSRNQ EL+ L +W++KGFKV SVCDLSSR
Sbjct: 11 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR 70
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+R++L+ TV + F GKLNIL+NNA I K D T ED S + S NFE+ +HLS LAH
Sbjct: 71 SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH 130
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P KAS G++VFISSV G +P ++YGA KGAM+QLT+ LA EWAKDNIR N V P
Sbjct: 131 PFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPG 190
Query: 182 VIKTSMIK 189
VI TS+++
Sbjct: 191 VIATSLVE 198
|
Catalyzes the stereospecific reduction of tropinone to pseudotropine. Datura stramonium (taxid: 4076) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 3 EC: 6 |
| >sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVT T GIG A LA+ GA V SR Q +D + K +G VTG+VC + E
Sbjct: 36 ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAE 95
Query: 63 QREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
RE+L+ T + G ++ILI+NAA++ F +D+ E + N ++ L++
Sbjct: 96 DRERLVATAVKL-HGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVV 154
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P G GSIV +SS+ PS+ Y K A+ LTKNLA E A+ N+R N +AP
Sbjct: 155 PEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPG 214
Query: 182 VIKTS 186
+I+TS
Sbjct: 215 LIRTS 219
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 114 bits (285), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVT T GIG A LA GA V SR Q +D + + +G VTG VC + E
Sbjct: 36 ALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGKAE 95
Query: 63 QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
REKL+ + QG ++IL++NAA+ F +D+T E + V S N + + +
Sbjct: 96 DREKLVNMALKLHQG-IDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAVV 154
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + G GS+V +SSV G PS+ Y K A+ LTKN A E A NIR N +AP
Sbjct: 155 PAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPG 214
Query: 182 VIKT 185
+IKT
Sbjct: 215 LIKT 218
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVT T GIG A LA GA V SR Q +D + + +G VTG VC + E
Sbjct: 36 ALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAE 95
Query: 63 QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
REKLI T QG ++IL++NAA+ F +D+T E V S N + + +
Sbjct: 96 DREKLITTALKRHQG-IDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVV 154
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + G GS+V + SV G PS+ Y K A+ LTKN A E A NIR N +AP
Sbjct: 155 PEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPG 214
Query: 182 VIKT 185
+IKT
Sbjct: 215 LIKT 218
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 112 bits (279), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 101/185 (54%), Gaps = 2/185 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVT T GIG A LA+ GA V SR Q +D + + +G VTG+VC + E
Sbjct: 36 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAE 95
Query: 63 QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
RE+L+ ++ G ++IL++NAA+ F +D T E + N ++ +++
Sbjct: 96 DRERLVAMAVNL-HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVV 154
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + G GS++ +SSVG P++ Y K A+ LTKNLA E A NIR N +AP
Sbjct: 155 PEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPG 214
Query: 182 VIKTS 186
+IKT+
Sbjct: 215 LIKTN 219
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Sus scrofa (taxid: 9823) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
| >sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 98/185 (52%), Gaps = 2/185 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVT T GIG A LA+ GA V SR Q +D + + +G VTG+VC + E
Sbjct: 35 ALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAE 94
Query: 63 QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
RE+L+ T + G ++IL++NAA+ F +D+T E N ++ +++
Sbjct: 95 DRERLVATAVKL-HGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVV 153
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + G GS+V +SS+ P S Y K A+ LTK LA E A NIR N +AP
Sbjct: 154 PEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPG 213
Query: 182 VIKTS 186
+IKTS
Sbjct: 214 LIKTS 218
|
Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 1 EC: 8 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 202 | ||||||
| 225440460 | 267 | PREDICTED: tropinone reductase homolog [ | 0.930 | 0.704 | 0.702 | 6e-75 | |
| 147779411 | 307 | hypothetical protein VITISV_028249 [Viti | 0.940 | 0.618 | 0.691 | 2e-74 | |
| 147838761 | 270 | hypothetical protein VITISV_016037 [Viti | 0.930 | 0.696 | 0.712 | 3e-74 | |
| 147769646 | 270 | hypothetical protein VITISV_035429 [Viti | 0.930 | 0.696 | 0.712 | 4e-74 | |
| 297740327 | 250 | unnamed protein product [Vitis vinifera] | 0.940 | 0.76 | 0.685 | 4e-74 | |
| 297746010 | 270 | unnamed protein product [Vitis vinifera] | 0.930 | 0.696 | 0.707 | 5e-74 | |
| 225434831 | 270 | PREDICTED: tropinone reductase homolog A | 0.930 | 0.696 | 0.712 | 5e-74 | |
| 359478606 | 533 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.851 | 0.322 | 0.707 | 6e-74 | |
| 359478910 | 270 | PREDICTED: tropinone reductase homolog A | 0.935 | 0.7 | 0.693 | 6e-74 | |
| 297746018 | 252 | unnamed protein product [Vitis vinifera] | 0.930 | 0.746 | 0.712 | 7e-74 |
| >gi|225440460|ref|XP_002271837.1| PREDICTED: tropinone reductase homolog [Vitis vinifera] gi|297740324|emb|CBI30506.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 132/188 (70%), Positives = 154/188 (81%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGG+RGIGHA VEELA FGA VHTCSRNQ ELD RL EWKNKGFKV+ S+CD+SS
Sbjct: 18 MTALVTGGSRGIGHAIVEELAAFGATVHTCSRNQEELDQRLQEWKNKGFKVSASLCDVSS 77
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QR +L+ETV+SIF GKL+IL+NNA +K + TAED ST+ TNFES +HL QL
Sbjct: 78 RSQRTQLMETVSSIFDGKLSILVNNAGTIILKEATECTAEDFSTIMGTNFESAYHLCQLG 137
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASGNGSIVFISS+ G+ P+ S+Y A KGAMNQ+TKNLACEWAKD IR NT+AP
Sbjct: 138 HPLLKASGNGSIVFISSISGLLAFPASSIYAASKGAMNQVTKNLACEWAKDGIRVNTIAP 197
Query: 181 WVIKTSMI 188
W+IKTS++
Sbjct: 198 WIIKTSLL 205
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147779411|emb|CAN74482.1| hypothetical protein VITISV_028249 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 132/191 (69%), Positives = 158/191 (82%), Gaps = 1/191 (0%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGGTRGIG+A VEELA GAIVHTCSRNQ EL+ RL EW+ KGF+V+GSVCDL+S
Sbjct: 18 MTALVTGGTRGIGYAIVEELAELGAIVHTCSRNQTELNERLQEWEGKGFRVSGSVCDLTS 77
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QREKL ETV+S+F+GKLNIL+NNAA +K + TAED S++ TNFES +HL QLA
Sbjct: 78 RAQREKLTETVSSLFEGKLNILVNNAATVALKAXTNYTAEDCSSILQTNFESPYHLCQLA 137
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG GSI+FISSV G+ +P +S+Y A KGA+NQ+TKNLACEWAKDNIRTN VAP
Sbjct: 138 HPLLKASGRGSIIFISSVAGLISLPHMSVYAATKGAINQVTKNLACEWAKDNIRTNAVAP 197
Query: 181 WVIKTSMIKPF 191
W ++TS ++P
Sbjct: 198 WTVRTS-VRPI 207
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147838761|emb|CAN69507.1| hypothetical protein VITISV_016037 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/188 (71%), Positives = 156/188 (82%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGGT+GIGHA VEELA GA +HTCSR + EL+ L +WK KGF V+GSVCD+SS
Sbjct: 19 MTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QREKL+ETV+S+F+GKLNIL+NNAAI KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 79 RAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG GSIVFISSV GV I +S Y KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVAGVASIKYLSAYSVTKGAMNQLTKNLACEWAEDNIRSNAVAP 198
Query: 181 WVIKTSMI 188
W IKT M+
Sbjct: 199 WYIKTPMV 206
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147769646|emb|CAN63543.1| hypothetical protein VITISV_035429 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 134/188 (71%), Positives = 156/188 (82%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGGT+GIGHA VEELA GA +HTCSR + EL+ L +WK KGF V+GSVCD+SS
Sbjct: 19 MTALVTGGTKGIGHAIVEELAGLGAAIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QREKL+ETV+S+F GKLNIL+NNAAI KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 79 RAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG GSIVFISSV GV + +S Y A KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAEDNIRSNAVAP 198
Query: 181 WVIKTSMI 188
W IKT M+
Sbjct: 199 WYIKTPMV 206
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297740327|emb|CBI30509.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 282 bits (722), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 131/191 (68%), Positives = 158/191 (82%), Gaps = 1/191 (0%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTAL+TGGTRGIG+A VEELA GAIVHTCSRNQ EL+ RL EW+ KGF+V+GSVCDL+S
Sbjct: 1 MTALITGGTRGIGYAIVEELAELGAIVHTCSRNQTELNERLQEWEGKGFRVSGSVCDLTS 60
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QREKL ETV+S+F+GKLNIL+NNAA +K + TAED S++ TNFES +HL QLA
Sbjct: 61 RAQREKLTETVSSLFEGKLNILVNNAATVALKAPTNYTAEDCSSILQTNFESPYHLCQLA 120
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG GSI+FISSV G+ +P +S+Y A KGA+NQ+TKNLACEWAKDNIRTN VAP
Sbjct: 121 HPLLKASGRGSIIFISSVAGLISLPHMSVYAATKGAINQVTKNLACEWAKDNIRTNAVAP 180
Query: 181 WVIKTSMIKPF 191
W ++TS ++P
Sbjct: 181 WTVRTS-VRPI 190
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297746010|emb|CBI16066.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 133/188 (70%), Positives = 156/188 (82%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGGT+GIGHA VEELA GA +HTCSR + EL+ L +WK KGF V+GSVCD+SS
Sbjct: 19 MTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QREKL+ETV+S+F+GKLNIL+NNAAI KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 79 RAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG GSIVFISSV GV + +S Y KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVAGVVSVKYLSAYAVTKGAMNQLTKNLACEWAEDNIRSNAVAP 198
Query: 181 WVIKTSMI 188
W IKT M+
Sbjct: 199 WCIKTPMV 206
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434831|ref|XP_002282554.1| PREDICTED: tropinone reductase homolog At1g07440 [Vitis vinifera] gi|297746017|emb|CBI16073.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 134/188 (71%), Positives = 156/188 (82%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGGT+GIGHA VEELA GA +HTCSR + EL+ L +WK KGF V+GSVCD+SS
Sbjct: 19 MTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QREKL+ETV+S+F+GKLNIL+NNAAI KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 79 RAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG GSIVFISSV GV I +S Y KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVAGVVSIKYLSAYSVTKGAMNQLTKNLACEWAEDNIRSNAVAP 198
Query: 181 WVIKTSMI 188
W IKT M+
Sbjct: 199 WYIKTPMV 206
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478606|ref|XP_003632143.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized short-chain type dehydrogenase/reductase y4vI-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 133/188 (70%), Positives = 156/188 (82%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGGT+GIGHA VEELA GA +HTCSR + EL+ L +WK KGF V+GSVCD+SS
Sbjct: 19 MTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QREKL+ETV+S+F+GKLNIL+NNAAI KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 79 RAQREKLMETVSSVFKGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG GSIVFISSV GV + +S Y KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVAGVVSVKYLSAYAVTKGAMNQLTKNLACEWAEDNIRSNAVAP 198
Query: 181 WVIKTSMI 188
W IKT M+
Sbjct: 199 WCIKTPMV 206
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359478910|ref|XP_003632186.1| PREDICTED: tropinone reductase homolog At1g07440-like [Vitis vinifera] gi|297746015|emb|CBI16071.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 131/189 (69%), Positives = 158/189 (83%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGGT+GIGHA VEELA GA +HTCSR + EL+ L +WK KGF V+GSVCD+SS
Sbjct: 19 MTALVTGGTKGIGHAIVEELAGLGATIHTCSRKETELNECLKDWKAKGFGVSGSVCDVSS 78
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QREKL++T++S+F GKLNILINNAAI+ KPT+++TAE+ ST+ +TNFESV+HLSQ+A
Sbjct: 79 RAQREKLMQTISSVFNGKLNILINNAAISIQKPTIEVTAEEFSTIMATNFESVYHLSQIA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG GSIVFISSV G+ ++S Y KGAMNQLTKNLACEWAKDNIR+N VAP
Sbjct: 139 HPLLKASGAGSIVFISSVSGIVAHKNISAYSVTKGAMNQLTKNLACEWAKDNIRSNAVAP 198
Query: 181 WVIKTSMIK 189
W IKT M++
Sbjct: 199 WYIKTPMVE 207
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297746018|emb|CBI16074.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 134/188 (71%), Positives = 155/188 (82%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGGT+GIGHA VEELA A +HTCSR + ELD L +WK KGF V+GSVCD+SS
Sbjct: 1 MTALVTGGTKGIGHAIVEELAGLVATIHTCSRKETELDECLKDWKAKGFGVSGSVCDVSS 60
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QREKL+ETV+S+F GKLNIL+NNAAI KPTV++TAE+ ST+ + NFESV+HLSQLA
Sbjct: 61 RAQREKLMETVSSVFNGKLNILVNNAAIVIQKPTVEVTAEEFSTIMAINFESVYHLSQLA 120
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG GSIVFISSV GV + +S Y A KGAMNQLTKNLACEWA+DNIR+N VAP
Sbjct: 121 HPLLKASGAGSIVFISSVAGVVSLKYLSAYSATKGAMNQLTKNLACEWAEDNIRSNAVAP 180
Query: 181 WVIKTSMI 188
W IKT M+
Sbjct: 181 WYIKTPMV 188
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 202 | ||||||
| TAIR|locus:2152815 | 264 | AT5G06060 [Arabidopsis thalian | 0.930 | 0.712 | 0.675 | 9.7e-64 | |
| TAIR|locus:2043177 | 269 | SAG13 "senescence-associated g | 0.945 | 0.710 | 0.649 | 5.4e-63 | |
| TAIR|locus:2043037 | 268 | AT2G29150 [Arabidopsis thalian | 0.920 | 0.694 | 0.652 | 1.1e-62 | |
| TAIR|locus:2043052 | 262 | AT2G29290 [Arabidopsis thalian | 0.960 | 0.740 | 0.617 | 1.8e-62 | |
| TAIR|locus:2043167 | 271 | AT2G29360 [Arabidopsis thalian | 0.930 | 0.693 | 0.638 | 3e-62 | |
| TAIR|locus:2043152 | 268 | AT2G29370 [Arabidopsis thalian | 0.945 | 0.712 | 0.617 | 7.1e-61 | |
| TAIR|locus:2043087 | 322 | AT2G29260 [Arabidopsis thalian | 0.955 | 0.599 | 0.615 | 8.1e-60 | |
| TAIR|locus:2025072 | 266 | AT1G07440 [Arabidopsis thalian | 0.920 | 0.699 | 0.623 | 5.1e-58 | |
| TAIR|locus:2042992 | 260 | TRI "tropinone reductase" [Ara | 0.945 | 0.734 | 0.596 | 6.6e-58 | |
| TAIR|locus:2025057 | 260 | AT1G07450 [Arabidopsis thalian | 0.940 | 0.730 | 0.586 | 6.8e-56 |
| TAIR|locus:2152815 AT5G06060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 127/188 (67%), Positives = 150/188 (79%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTGGTRGIG A VEELA+FGA VHTCSRNQ EL+A L++WK G V+GSVCD S R
Sbjct: 13 TALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGSVCDASVR 72
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+QREKLI+ +S F GKLNILINN KPTV+ ++E+ + + STN ES FHLSQ+AH
Sbjct: 73 DQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAFHLSQIAH 132
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL KASG GSIVFISSV G+ + S S+YGA KGA+NQLT+NLACEWA DNIRTN VAPW
Sbjct: 133 PLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIRTNCVAPW 192
Query: 182 VIKTSMIK 189
IKTS+++
Sbjct: 193 YIKTSLVE 200
|
|
| TAIR|locus:2043177 SAG13 "senescence-associated gene 13" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 124/191 (64%), Positives = 148/191 (77%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGG++GIG A VEELA GA VHTC+R++ +L RL EW+ KGF+VT SVCD+SS
Sbjct: 18 MTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLREWQAKGFQVTTSVCDVSS 77
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R+QR KL+ETV+S++QGKLNIL+NN + KPT + TAED S V +TN ES FHLSQLA
Sbjct: 78 RDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFSFVMATNLESAFHLSQLA 137
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG+GSIV ISS GV + S+YGA KGAMNQL +NLACEWA DNIRTN+V P
Sbjct: 138 HPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARNLACEWASDNIRTNSVCP 197
Query: 181 WVIKTSMIKPF 191
W I T + F
Sbjct: 198 WYITTPLSNDF 208
|
|
| TAIR|locus:2043037 AT2G29150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 122/187 (65%), Positives = 150/187 (80%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGG++G+G A VEELA GA VHTC+R++ +L RL EW+ KGF+VT SVCD+SS
Sbjct: 19 MTALVTGGSKGLGEAVVEELAMLGARVHTCARDETQLQERLREWQAKGFEVTTSVCDVSS 78
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
REQREKL+ETV+S+FQGKLNIL+NNA +KP+ + TAED S + +TN ES FHLSQ+A
Sbjct: 79 REQREKLMETVSSVFQGKLNILVNNAGTGIIKPSTEYTAEDYSFLMATNLESAFHLSQIA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG+GSIVF+SSV G+ S+YGA KGAMNQL ++LACEWA DNIR N+V P
Sbjct: 139 HPLLKASGSGSIVFMSSVAGLVHT-GASIYGASKGAMNQLGRSLACEWASDNIRVNSVCP 197
Query: 181 WVIKTSM 187
WVI T +
Sbjct: 198 WVITTPL 204
|
|
| TAIR|locus:2043052 AT2G29290 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 121/196 (61%), Positives = 153/196 (78%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
M ALVTGGT+GIG A VEEL+ GA VHTC+R++ +L RL EW+ KGF+VT S+CD+S
Sbjct: 10 MNALVTGGTKGIGEAVVEELSILGARVHTCARDETQLQERLREWQEKGFQVTTSICDVSL 69
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
REQREKL+ETV+S+FQGKLNIL+NN +KPT + TAE+ S + +TN +S FH+SQLA
Sbjct: 70 REQREKLMETVSSLFQGKLNILVNNVGTLMLKPTTEYTAEEFSFLMATNLDSAFHISQLA 129
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG+GSIV +SS+ GV + S+YGA KGAMNQL +NLACEWA DNIRTN + P
Sbjct: 130 HPLLKASGSGSIVLMSSIAGVVHVGVGSIYGATKGAMNQLARNLACEWASDNIRTNAICP 189
Query: 181 WVIKTSMIKPFEVLSV 196
W+I T +I ++LSV
Sbjct: 190 WLITTPLIS--DLLSV 203
|
|
| TAIR|locus:2043167 AT2G29360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 120/188 (63%), Positives = 148/188 (78%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGG++GIG A VEELA GA +HTC+R++ +L L +W+ KGF+VT SVCD+SS
Sbjct: 19 MTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLRKWQAKGFQVTTSVCDVSS 78
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R++REKL+ETV++IF+GKLNIL+NN VKPT+ TAED S +TN ES FHLSQLA
Sbjct: 79 RDKREKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDFSFTMATNLESAFHLSQLA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG+GSIV ISSV GV + S+YG KGAMNQL +NLACEWA DNIRTN+V P
Sbjct: 139 HPLLKASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGRNLACEWASDNIRTNSVCP 198
Query: 181 WVIKTSMI 188
W I+T ++
Sbjct: 199 WFIETPLV 206
|
|
| TAIR|locus:2043152 AT2G29370 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 118/191 (61%), Positives = 147/191 (76%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGG++G+G A VEELA GA VHTC+R++ +L L EW+ KG +VT SVCD+SS
Sbjct: 19 MTALVTGGSKGLGKAVVEELAMLGARVHTCARDETQLQESLREWQAKGLQVTTSVCDVSS 78
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R+QREKL+ETV+S+FQGKL+IL+ N I +KPT + TAE+ S + +TN ES FH SQLA
Sbjct: 79 RDQREKLMETVSSLFQGKLSILVPNVGIGVLKPTTECTAEEFSFIIATNLESTFHFSQLA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG+G+IV +SSV GV + + S+YGA KGAMNQL +NLACEWA DNIR N+V P
Sbjct: 139 HPLLKASGSGNIVLMSSVAGVVNLGNTSIYGATKGAMNQLARNLACEWASDNIRANSVCP 198
Query: 181 WVIKTSMIKPF 191
W I T K F
Sbjct: 199 WFITTPSTKDF 209
|
|
| TAIR|locus:2043087 AT2G29260 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 120/195 (61%), Positives = 150/195 (76%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
M+ALVTGGTRGIG A VEELA GA VHTC+RN+ EL+ L +W GF+V GSVCD+S
Sbjct: 71 MSALVTGGTRGIGRAIVEELAGLGAEVHTCARNEYELENCLSDWNRSGFRVAGSVCDVSD 130
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QRE L+ETV+S+F+GKL+IL+NN KP V+ TA + ST+ STNFESVFHL QLA
Sbjct: 131 RSQREALMETVSSVFEGKLHILVNNVGTNIRKPMVEFTAGEFSTLMSTNFESVFHLCQLA 190
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+PL + S GS+VFISSV G + ++S+ + KGA+NQLT++LACEWAKDNIR N VAP
Sbjct: 191 YPLLRESKAGSVVFISSVSGFVSLKNMSVQSSTKGAINQLTRSLACEWAKDNIRINAVAP 250
Query: 181 WVIKTSMIKPFEVLS 195
W IKTSM++ +VLS
Sbjct: 251 WYIKTSMVE--QVLS 263
|
|
| TAIR|locus:2025072 AT1G07440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 116/186 (62%), Positives = 141/186 (75%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+ L +W+ KGF+VTGSVCD S R
Sbjct: 16 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 75
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+REKL++TV+S+F GKL+ILINN KPT+D TAED S STN ES +HLSQLAH
Sbjct: 76 PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 135
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL KASG G+I+F+SS+ GV S+Y A KGA+NQL +NLACEWA D IR N VAP
Sbjct: 136 PLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPA 195
Query: 182 VIKTSM 187
VI T +
Sbjct: 196 VIATPL 201
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| TAIR|locus:2042992 TRI "tropinone reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 114/191 (59%), Positives = 140/191 (73%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
+TALVTGG GIGHA VEELA FGA +H C ++ L+ L EW+ KGF+V+GSVCD S+
Sbjct: 10 LTALVTGGASGIGHAIVEELAGFGAKIHVCDISKTLLNQSLSEWEKKGFQVSGSVCDASN 69
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R +RE L++TVT+IF GKLNIL+NN KPT++ AED S + STN ES +HLSQL+
Sbjct: 70 RLERETLMQTVTTIFDGKLNILVNNVGTIRTKPTIEYEAEDFSFLISTNLESAYHLSQLS 129
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASGNG I FISS G+ + S+YG KGA+NQL +NLACEWAKD IR N VAP
Sbjct: 130 HPLLKASGNGIITFISSAAGIVSFDAASIYGLTKGALNQLARNLACEWAKDGIRANAVAP 189
Query: 181 WVIKTSMIKPF 191
I T++ KPF
Sbjct: 190 NFITTALAKPF 200
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| TAIR|locus:2025057 AT1G07450 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 576 (207.8 bits), Expect = 6.8e-56, P = 6.8e-56
Identities = 112/191 (58%), Positives = 147/191 (76%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
MTALVTGG++GIG+A VEEL FGA VH C ++ L+ L W KGF+V+GS+CD+SS
Sbjct: 11 MTALVTGGSKGIGYAIVEELVGFGARVHICDIDETLLNECLSGWHAKGFEVSGSICDVSS 70
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R QR +L++TV+S+F KLNILINN +KPT++ TAED S++ +TN ES +++SQLA
Sbjct: 71 RPQRVQLMQTVSSLFGAKLNILINNVGKYILKPTLESTAEDFSSLMATNLESAYYISQLA 130
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASGNG+IVFISSV GV S ++YG KGA+NQL ++LACEWA DNIR N+VAP
Sbjct: 131 HPLLKASGNGNIVFISSVTGVVSGTS-TIYGVTKGALNQLARDLACEWASDNIRANSVAP 189
Query: 181 WVIKTSMIKPF 191
WV TS+++ +
Sbjct: 190 WVTATSLVQKY 200
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.921 |
| 4th Layer | 1.1.1.269 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00021367001 | SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (212 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | GSVIVG00037292001 | SubName- Full=Chromosome undetermined scaffold_87, whole genome shotgun sequence; (173 aa) | • | 0.424 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 202 | |||
| cd05329 | 251 | cd05329, TR_SDR_c, tropinone reductase-I and II (T | 1e-100 | |
| cd05233 | 234 | cd05233, SDR_c, classical (c) SDRs | 5e-60 | |
| PRK09242 | 257 | PRK09242, PRK09242, tropinone reductase; Provision | 7e-57 | |
| PRK05565 | 247 | PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-48 | |
| PRK05653 | 246 | PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-47 | |
| COG1028 | 251 | COG1028, FabG, Dehydrogenases with different speci | 1e-46 | |
| PRK07231 | 251 | PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-46 | |
| PRK12826 | 251 | PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote | 3e-44 | |
| PRK12825 | 249 | PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) | 3e-43 | |
| cd05347 | 248 | cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena | 1e-40 | |
| PRK05557 | 248 | PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-39 | |
| TIGR01830 | 239 | TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier | 3e-39 | |
| PRK12829 | 264 | PRK12829, PRK12829, short chain dehydrogenase; Pro | 2e-38 | |
| cd05333 | 240 | cd05333, BKR_SDR_c, beta-Keto acyl carrier protein | 8e-38 | |
| cd05352 | 252 | cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M | 1e-37 | |
| cd05344 | 253 | cd05344, BKR_like_SDR_like, putative beta-ketoacyl | 4e-36 | |
| cd08936 | 256 | cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re | 2e-35 | |
| pfam00106 | 167 | pfam00106, adh_short, short chain dehydrogenase | 5e-35 | |
| cd05374 | 248 | cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster | 1e-34 | |
| PRK07097 | 265 | PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro | 2e-34 | |
| cd05369 | 249 | cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta | 2e-33 | |
| cd05341 | 247 | cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta | 2e-33 | |
| cd05359 | 242 | cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c | 3e-33 | |
| PRK08324 | 681 | PRK08324, PRK08324, short chain dehydrogenase; Val | 7e-33 | |
| cd05324 | 225 | cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu | 1e-32 | |
| PRK08213 | 259 | PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro | 1e-32 | |
| cd05351 | 244 | cd05351, XR_like_SDR_c, xylulose reductase-like, c | 2e-32 | |
| TIGR02415 | 254 | TIGR02415, 23BDH, acetoin reductases | 2e-32 | |
| PRK06172 | 253 | PRK06172, PRK06172, short chain dehydrogenase; Pro | 6e-32 | |
| PRK12939 | 250 | PRK12939, PRK12939, short chain dehydrogenase; Pro | 4e-31 | |
| PRK12429 | 258 | PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas | 4e-31 | |
| cd05366 | 257 | cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol | 7e-31 | |
| cd05365 | 242 | cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi | 3e-30 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 4e-30 | |
| PRK12827 | 249 | PRK12827, PRK12827, short chain dehydrogenase; Pro | 4e-30 | |
| PRK06138 | 252 | PRK06138, PRK06138, short chain dehydrogenase; Pro | 4e-30 | |
| TIGR01963 | 255 | TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | 5e-30 | |
| COG0300 | 265 | COG0300, DltE, Short-chain dehydrogenases of vario | 6e-30 | |
| COG4221 | 246 | COG4221, COG4221, Short-chain alcohol dehydrogenas | 9e-30 | |
| cd05362 | 243 | cd05362, THN_reductase-like_SDR_c, tetrahydroxynap | 9e-30 | |
| PRK06841 | 255 | PRK06841, PRK06841, short chain dehydrogenase; Pro | 1e-29 | |
| cd05323 | 244 | cd05323, ADH_SDR_c_like, insect type alcohol dehyd | 1e-29 | |
| PRK07666 | 239 | PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-29 | |
| cd08943 | 250 | cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al | 2e-29 | |
| PRK06935 | 258 | PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog | 4e-29 | |
| PRK06113 | 255 | PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro | 4e-29 | |
| PRK07856 | 252 | PRK07856, PRK07856, short chain dehydrogenase; Pro | 5e-29 | |
| cd05364 | 253 | cd05364, SDR_c11, classical (c) SDR, subgroup 11 | 9e-29 | |
| cd05339 | 243 | cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy | 1e-28 | |
| PRK07326 | 237 | PRK07326, PRK07326, short chain dehydrogenase; Pro | 1e-28 | |
| cd05358 | 253 | cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc | 1e-28 | |
| PRK07060 | 245 | PRK07060, PRK07060, short chain dehydrogenase; Pro | 1e-28 | |
| cd08932 | 223 | cd08932, HetN_like_SDR_c, HetN oxidoreductase-like | 4e-28 | |
| PRK06171 | 266 | PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro | 5e-28 | |
| PRK06077 | 252 | PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) | 5e-28 | |
| cd08929 | 226 | cd08929, SDR_c4, classical (c) SDR, subgroup 4 | 9e-28 | |
| cd05345 | 248 | cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl | 3e-27 | |
| cd05338 | 246 | cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena | 8e-27 | |
| PRK07814 | 263 | PRK07814, PRK07814, short chain dehydrogenase; Pro | 8e-27 | |
| cd05330 | 257 | cd05330, cyclohexanol_reductase_SDR_c, cyclohexano | 9e-27 | |
| PRK12828 | 239 | PRK12828, PRK12828, short chain dehydrogenase; Pro | 2e-26 | |
| cd08944 | 246 | cd08944, SDR_c12, classical (c) SDR, subgroup 12 | 2e-26 | |
| cd08945 | 258 | cd08945, PKR_SDR_c, Polyketide ketoreductase, clas | 2e-26 | |
| cd05350 | 239 | cd05350, SDR_c6, classical (c) SDR, subgroup 6 | 4e-26 | |
| PRK06181 | 263 | PRK06181, PRK06181, short chain dehydrogenase; Pro | 5e-26 | |
| PRK13394 | 262 | PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas | 6e-26 | |
| PRK07523 | 255 | PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro | 8e-26 | |
| TIGR03971 | 265 | TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil | 9e-26 | |
| PRK08063 | 250 | PRK08063, PRK08063, enoyl-(acyl carrier protein) r | 1e-25 | |
| cd05327 | 269 | cd05327, retinol-DH_like_SDR_c_like, retinol dehyd | 1e-25 | |
| PRK08643 | 256 | PRK08643, PRK08643, acetoin reductase; Validated | 1e-25 | |
| PRK12824 | 245 | PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro | 2e-25 | |
| cd09763 | 265 | cd09763, DHRS1-like_SDR_c, human dehydrogenase/red | 3e-25 | |
| cd08940 | 258 | cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge | 4e-25 | |
| TIGR01829 | 242 | TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta | 4e-25 | |
| TIGR04316 | 250 | TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben | 4e-25 | |
| cd08930 | 250 | cd08930, SDR_c8, classical (c) SDR, subgroup 8 | 8e-25 | |
| TIGR01832 | 248 | TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena | 1e-24 | |
| PRK07478 | 254 | PRK07478, PRK07478, short chain dehydrogenase; Pro | 2e-24 | |
| cd05346 | 249 | cd05346, SDR_c5, classical (c) SDR, subgroup 5 | 3e-24 | |
| cd05367 | 241 | cd05367, SPR-like_SDR_c, sepiapterin reductase (SP | 3e-24 | |
| cd08935 | 271 | cd08935, mannonate_red_SDR_c, putative D-mannonate | 3e-24 | |
| PRK07035 | 252 | PRK07035, PRK07035, short chain dehydrogenase; Pro | 3e-24 | |
| PRK06463 | 255 | PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-24 | |
| cd05337 | 255 | cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl | 6e-24 | |
| cd05360 | 233 | cd05360, SDR_c3, classical (c) SDR, subgroup 3 | 6e-24 | |
| PRK06701 | 290 | PRK06701, PRK06701, short chain dehydrogenase; Pro | 7e-24 | |
| PRK06484 | 520 | PRK06484, PRK06484, short chain dehydrogenase; Val | 9e-24 | |
| PRK12935 | 247 | PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro | 9e-24 | |
| cd05370 | 228 | cd05370, SDR_c2, classical (c) SDR, subgroup 2 | 1e-23 | |
| PRK12745 | 256 | PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote | 1e-23 | |
| cd08942 | 250 | cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy | 1e-23 | |
| cd08939 | 239 | cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine | 1e-23 | |
| cd08934 | 243 | cd08934, CAD_SDR_c, clavulanic acid dehydrogenase | 2e-23 | |
| cd05332 | 257 | cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste | 2e-23 | |
| PRK06124 | 256 | PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro | 2e-23 | |
| cd05355 | 270 | cd05355, SDR_c1, classical (c) SDR, subgroup 1 | 4e-23 | |
| PRK08267 | 260 | PRK08267, PRK08267, short chain dehydrogenase; Pro | 1e-22 | |
| PRK07067 | 257 | PRK07067, PRK07067, sorbitol dehydrogenase; Provis | 1e-22 | |
| PRK07109 | 334 | PRK07109, PRK07109, short chain dehydrogenase; Pro | 2e-22 | |
| PRK09135 | 249 | PRK09135, PRK09135, pteridine reductase; Provision | 2e-22 | |
| cd05325 | 233 | cd05325, carb_red_sniffer_like_SDR_c, carbonyl red | 3e-22 | |
| cd08931 | 227 | cd08931, SDR_c9, classical (c) SDR, subgroup 9 | 4e-22 | |
| PRK08265 | 261 | PRK08265, PRK08265, short chain dehydrogenase; Pro | 7e-22 | |
| PRK05867 | 253 | PRK05867, PRK05867, short chain dehydrogenase; Pro | 1e-21 | |
| PRK07063 | 260 | PRK07063, PRK07063, short chain dehydrogenase; Pro | 2e-21 | |
| PRK07069 | 251 | PRK07069, PRK07069, short chain dehydrogenase; Val | 2e-21 | |
| PRK08226 | 263 | PRK08226, PRK08226, short chain dehydrogenase; Pro | 3e-21 | |
| PRK07062 | 265 | PRK07062, PRK07062, short chain dehydrogenase; Pro | 3e-21 | |
| PRK08085 | 254 | PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro | 3e-21 | |
| cd05343 | 250 | cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c | 4e-21 | |
| PRK07774 | 250 | PRK07774, PRK07774, short chain dehydrogenase; Pro | 8e-21 | |
| PRK06398 | 258 | PRK06398, PRK06398, aldose dehydrogenase; Validate | 8e-21 | |
| PRK07454 | 241 | PRK07454, PRK07454, short chain dehydrogenase; Pro | 9e-21 | |
| PRK08220 | 252 | PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy | 1e-20 | |
| PRK08277 | 278 | PRK08277, PRK08277, D-mannonate oxidoreductase; Pr | 1e-20 | |
| PRK08628 | 258 | PRK08628, PRK08628, short chain dehydrogenase; Pro | 1e-20 | |
| PRK09072 | 263 | PRK09072, PRK09072, short chain dehydrogenase; Pro | 2e-20 | |
| PRK06200 | 263 | PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny | 2e-20 | |
| cd05368 | 241 | cd05368, DHRS6_like_SDR_c, human DHRS6-like, class | 3e-20 | |
| cd05331 | 244 | cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz | 3e-20 | |
| cd05371 | 252 | cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr | 3e-20 | |
| PRK08936 | 261 | PRK08936, PRK08936, glucose-1-dehydrogenase; Provi | 3e-20 | |
| cd05356 | 239 | cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst | 4e-20 | |
| cd05326 | 249 | cd05326, secoisolariciresinol-DH_like_SDR_c, secoi | 5e-20 | |
| PRK12936 | 245 | PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote | 5e-20 | |
| cd05354 | 235 | cd05354, SDR_c7, classical (c) SDR, subgroup 7 | 8e-20 | |
| PRK07576 | 264 | PRK07576, PRK07576, short chain dehydrogenase; Pro | 1e-19 | |
| PRK06198 | 260 | PRK06198, PRK06198, short chain dehydrogenase; Pro | 1e-19 | |
| cd05357 | 234 | cd05357, PR_SDR_c, pteridine reductase (PR), class | 2e-19 | |
| cd05353 | 250 | cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)- | 3e-19 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 5e-19 | |
| PRK12743 | 256 | PRK12743, PRK12743, oxidoreductase; Provisional | 5e-19 | |
| PRK06949 | 258 | PRK06949, PRK06949, short chain dehydrogenase; Pro | 5e-19 | |
| PRK09730 | 247 | PRK09730, PRK09730, putative NAD(P)-binding oxidor | 6e-19 | |
| TIGR02632 | 676 | TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate | 8e-19 | |
| PRK06500 | 249 | PRK06500, PRK06500, short chain dehydrogenase; Pro | 1e-18 | |
| PRK12823 | 260 | PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1 | 1e-18 | |
| cd05363 | 254 | cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), | 1e-18 | |
| PRK12748 | 256 | PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote | 2e-18 | |
| PRK08993 | 253 | PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog | 2e-18 | |
| PRK08589 | 272 | PRK08589, PRK08589, short chain dehydrogenase; Val | 2e-18 | |
| PRK12746 | 254 | PRK12746, PRK12746, short chain dehydrogenase; Pro | 3e-18 | |
| cd05349 | 246 | cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl | 3e-18 | |
| cd08937 | 256 | cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa | 3e-18 | |
| PRK06523 | 260 | PRK06523, PRK06523, short chain dehydrogenase; Pro | 4e-18 | |
| cd05340 | 236 | cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li | 6e-18 | |
| PRK06179 | 270 | PRK06179, PRK06179, short chain dehydrogenase; Pro | 7e-18 | |
| cd08933 | 261 | cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl | 8e-18 | |
| PRK06114 | 254 | PRK06114, PRK06114, short chain dehydrogenase; Pro | 1e-17 | |
| PRK07577 | 234 | PRK07577, PRK07577, short chain dehydrogenase; Pro | 2e-17 | |
| PRK06123 | 248 | PRK06123, PRK06123, short chain dehydrogenase; Pro | 2e-17 | |
| PRK05866 | 293 | PRK05866, PRK05866, short chain dehydrogenase; Pro | 2e-17 | |
| PRK12938 | 246 | PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro | 3e-17 | |
| PRK05876 | 275 | PRK05876, PRK05876, short chain dehydrogenase; Pro | 3e-17 | |
| PRK07831 | 262 | PRK07831, PRK07831, short chain dehydrogenase; Pro | 4e-17 | |
| PRK06550 | 235 | PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) | 4e-17 | |
| PRK07074 | 257 | PRK07074, PRK07074, short chain dehydrogenase; Pro | 5e-17 | |
| PRK12937 | 245 | PRK12937, PRK12937, short chain dehydrogenase; Pro | 6e-17 | |
| PRK08217 | 253 | PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) | 6e-17 | |
| COG3967 | 245 | COG3967, DltE, Short-chain dehydrogenase involved | 7e-17 | |
| pfam13561 | 239 | pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote | 1e-16 | |
| PRK12481 | 251 | PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog | 1e-16 | |
| cd05361 | 242 | cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de | 1e-16 | |
| PRK12747 | 252 | PRK12747, PRK12747, short chain dehydrogenase; Pro | 2e-16 | |
| TIGR01831 | 239 | TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote | 3e-16 | |
| cd05348 | 257 | cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro | 5e-16 | |
| PRK08263 | 275 | PRK08263, PRK08263, short chain dehydrogenase; Pro | 6e-16 | |
| PRK05650 | 270 | PRK05650, PRK05650, short chain dehydrogenase; Pro | 7e-16 | |
| PRK07890 | 258 | PRK07890, PRK07890, short chain dehydrogenase; Pro | 1e-15 | |
| PRK08703 | 239 | PRK08703, PRK08703, short chain dehydrogenase; Pro | 1e-15 | |
| PLN02253 | 280 | PLN02253, PLN02253, xanthoxin dehydrogenase | 2e-15 | |
| PRK08219 | 227 | PRK08219, PRK08219, short chain dehydrogenase; Pro | 3e-15 | |
| PRK05693 | 274 | PRK05693, PRK05693, short chain dehydrogenase; Pro | 3e-15 | |
| PRK06128 | 300 | PRK06128, PRK06128, oxidoreductase; Provisional | 8e-15 | |
| PRK08017 | 256 | PRK08017, PRK08017, oxidoreductase; Provisional | 8e-15 | |
| PRK08642 | 253 | PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) | 1e-14 | |
| PRK07677 | 252 | PRK07677, PRK07677, short chain dehydrogenase; Pro | 2e-14 | |
| PRK08945 | 247 | PRK08945, PRK08945, putative oxoacyl-(acyl carrier | 2e-14 | |
| cd11731 | 198 | cd11731, Lin1944_like_SDR_c, Lin1944 and related p | 3e-14 | |
| PRK06947 | 248 | PRK06947, PRK06947, glucose-1-dehydrogenase; Provi | 3e-14 | |
| TIGR03206 | 250 | TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy | 3e-14 | |
| PRK07825 | 273 | PRK07825, PRK07825, short chain dehydrogenase; Pro | 5e-14 | |
| PRK06057 | 255 | PRK06057, PRK06057, short chain dehydrogenase; Pro | 6e-14 | |
| PRK12859 | 256 | PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote | 7e-14 | |
| PRK06125 | 259 | PRK06125, PRK06125, short chain dehydrogenase; Pro | 1e-13 | |
| PRK08264 | 238 | PRK08264, PRK08264, short chain dehydrogenase; Val | 1e-13 | |
| PRK07792 | 306 | PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) | 2e-13 | |
| cd09761 | 242 | cd09761, A3DFK9-like_SDR_c, Clostridium thermocell | 2e-13 | |
| cd09806 | 258 | cd09806, type1_17beta-HSD-like_SDR_c, human estrog | 2e-13 | |
| PRK12742 | 237 | PRK12742, PRK12742, oxidoreductase; Provisional | 4e-13 | |
| PRK09186 | 256 | PRK09186, PRK09186, flagellin modification protein | 5e-13 | |
| PRK06924 | 251 | PRK06924, PRK06924, short chain dehydrogenase; Pro | 6e-13 | |
| TIGR03325 | 262 | TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3- | 7e-13 | |
| PRK08261 | 450 | PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-13 | |
| PRK06182 | 273 | PRK06182, PRK06182, short chain dehydrogenase; Val | 1e-12 | |
| PRK07832 | 272 | PRK07832, PRK07832, short chain dehydrogenase; Pro | 2e-12 | |
| PRK07041 | 230 | PRK07041, PRK07041, short chain dehydrogenase; Pro | 4e-12 | |
| PRK07985 | 294 | PRK07985, PRK07985, oxidoreductase; Provisional | 5e-12 | |
| PRK06139 | 330 | PRK06139, PRK06139, short chain dehydrogenase; Pro | 1e-11 | |
| cd02266 | 186 | cd02266, SDR, Short-chain dehydrogenases/reductase | 1e-11 | |
| PRK12384 | 259 | PRK12384, PRK12384, sorbitol-6-phosphate dehydroge | 1e-11 | |
| PRK06914 | 280 | PRK06914, PRK06914, short chain dehydrogenase; Pro | 2e-11 | |
| PRK08416 | 260 | PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro | 2e-11 | |
| PRK07370 | 258 | PRK07370, PRK07370, enoyl-(acyl carrier protein) r | 3e-11 | |
| smart00822 | 180 | smart00822, PKS_KR, This enzymatic domain is part | 4e-11 | |
| PRK06194 | 287 | PRK06194, PRK06194, hypothetical protein; Provisio | 5e-11 | |
| cd05328 | 250 | cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de | 9e-11 | |
| PRK07102 | 243 | PRK07102, PRK07102, short chain dehydrogenase; Pro | 2e-10 | |
| cd05372 | 250 | cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) | 3e-10 | |
| PRK05855 | 582 | PRK05855, PRK05855, short chain dehydrogenase; Val | 3e-10 | |
| PRK07024 | 257 | PRK07024, PRK07024, short chain dehydrogenase; Pro | 3e-10 | |
| cd08953 | 436 | cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup | 4e-10 | |
| cd05334 | 221 | cd05334, DHPR_SDR_c_like, dihydropteridine reducta | 7e-10 | |
| PRK05786 | 238 | PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) | 8e-10 | |
| PRK08340 | 259 | PRK08340, PRK08340, glucose-1-dehydrogenase; Provi | 9e-10 | |
| COG0623 | 259 | COG0623, FabI, Enoyl-[acyl-carrier-protein] | 1e-09 | |
| PRK08177 | 225 | PRK08177, PRK08177, short chain dehydrogenase; Pro | 1e-09 | |
| PRK08339 | 263 | PRK08339, PRK08339, short chain dehydrogenase; Pro | 1e-09 | |
| cd09805 | 281 | cd09805, type2_17beta_HSD-like_SDR_c, human 17beta | 3e-09 | |
| cd05322 | 257 | cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy | 3e-09 | |
| PRK09291 | 257 | PRK09291, PRK09291, short chain dehydrogenase; Pro | 3e-09 | |
| PRK07023 | 243 | PRK07023, PRK07023, short chain dehydrogenase; Pro | 4e-09 | |
| cd09807 | 274 | cd09807, retinol-DH_like_SDR_c, retinol dehydrogen | 5e-09 | |
| PRK08278 | 273 | PRK08278, PRK08278, short chain dehydrogenase; Pro | 7e-09 | |
| PRK05872 | 296 | PRK05872, PRK05872, short chain dehydrogenase; Pro | 9e-09 | |
| PLN02780 | 320 | PLN02780, PLN02780, ketoreductase/ oxidoreductase | 9e-09 | |
| PRK05875 | 276 | PRK05875, PRK05875, short chain dehydrogenase; Pro | 9e-09 | |
| PRK08415 | 274 | PRK08415, PRK08415, enoyl-(acyl carrier protein) r | 1e-08 | |
| PRK06079 | 252 | PRK06079, PRK06079, enoyl-(acyl carrier protein) r | 1e-08 | |
| pfam08659 | 181 | pfam08659, KR, KR domain | 1e-08 | |
| PRK08251 | 248 | PRK08251, PRK08251, short chain dehydrogenase; Pro | 2e-08 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 3e-08 | |
| cd05373 | 238 | cd05373, SDR_c10, classical (c) SDR, subgroup 10 | 4e-08 | |
| PRK10538 | 248 | PRK10538, PRK10538, malonic semialdehyde reductase | 6e-08 | |
| cd05274 | 375 | cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt | 6e-08 | |
| cd09808 | 255 | cd09808, DHRS-12_like_SDR_c-like, human dehydrogen | 8e-08 | |
| TIGR01500 | 256 | TIGR01500, sepiapter_red, sepiapterin reductase | 1e-07 | |
| PRK09134 | 258 | PRK09134, PRK09134, short chain dehydrogenase; Pro | 2e-07 | |
| cd11730 | 206 | cd11730, Tthb094_like_SDR_c, Tthb094 and related p | 2e-07 | |
| TIGR02685 | 267 | TIGR02685, pter_reduc_Leis, pteridine reductase | 3e-07 | |
| PRK05993 | 277 | PRK05993, PRK05993, short chain dehydrogenase; Pro | 7e-07 | |
| PRK07533 | 258 | PRK07533, PRK07533, enoyl-(acyl carrier protein) r | 1e-06 | |
| PRK06180 | 277 | PRK06180, PRK06180, short chain dehydrogenase; Pro | 1e-06 | |
| PRK07806 | 248 | PRK07806, PRK07806, short chain dehydrogenase; Pro | 1e-06 | |
| PRK06101 | 240 | PRK06101, PRK06101, short chain dehydrogenase; Pro | 1e-06 | |
| PRK12744 | 257 | PRK12744, PRK12744, short chain dehydrogenase; Pro | 1e-06 | |
| PRK07775 | 274 | PRK07775, PRK07775, short chain dehydrogenase; Pro | 3e-06 | |
| PRK05717 | 255 | PRK05717, PRK05717, oxidoreductase; Validated | 3e-06 | |
| cd09809 | 284 | cd09809, human_WWOX_like_SDR_c-like, human WWOX (W | 4e-06 | |
| PRK07791 | 286 | PRK07791, PRK07791, short chain dehydrogenase; Pro | 6e-06 | |
| PRK06483 | 236 | PRK06483, PRK06483, dihydromonapterin reductase; P | 6e-06 | |
| cd09762 | 243 | cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro | 5e-05 | |
| PRK05854 | 313 | PRK05854, PRK05854, short chain dehydrogenase; Pro | 6e-05 | |
| PRK06482 | 276 | PRK06482, PRK06482, short chain dehydrogenase; Pro | 8e-05 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 8e-05 | |
| PRK06603 | 260 | PRK06603, PRK06603, enoyl-(acyl carrier protein) r | 9e-05 | |
| PRK08690 | 261 | PRK08690, PRK08690, enoyl-(acyl carrier protein) r | 3e-04 | |
| PRK09009 | 235 | PRK09009, PRK09009, C factor cell-cell signaling p | 3e-04 | |
| PRK08159 | 272 | PRK08159, PRK08159, enoyl-(acyl carrier protein) r | 5e-04 | |
| cd05258 | 337 | cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e | 0.001 | |
| PRK08594 | 257 | PRK08594, PRK08594, enoyl-(acyl carrier protein) r | 0.001 | |
| PRK07578 | 199 | PRK07578, PRK07578, short chain dehydrogenase; Pro | 0.002 | |
| cd08951 | 260 | cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 | 0.004 |
| >gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 288 bits (740), Expect = e-100
Identities = 125/190 (65%), Positives = 150/190 (78%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
TALVTGGT+GIG+A VEELA GA V+TC+RNQ ELD L EW+ KGFKV GSVCD+SS
Sbjct: 7 KTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCDVSS 66
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R +R++L++TV S F GKLNIL+NNA K D T ED S + STNFE+ +HLS+LA
Sbjct: 67 RSERQELMDTVASHFGGKLNILVNNAGTNIRKEAKDYTEEDYSLIMSTNFEAAYHLSRLA 126
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASGNG+IVFISSV GV +PS + YGA KGA+NQLT++LACEWAKDNIR N VAP
Sbjct: 127 HPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIRVNAVAP 186
Query: 181 WVIKTSMIKP 190
WVI T +++P
Sbjct: 187 WVIATPLVEP 196
|
This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251 |
| >gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 187 bits (476), Expect = 5e-60
Identities = 78/189 (41%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTG + GIG A LAR GA V RN+ E A L + G D+S E
Sbjct: 1 ALVTGASSGIGRAIARRLAREGAKVVLADRNE-EALAELAAIEALGGNAVAVQADVSDEE 59
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
E L+E F G+L+IL+NNA IA P ++T ED V N VF L++ A P
Sbjct: 60 DVEALVEEALEEF-GRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
K G G IV ISSV G+R +P + Y A K A+ LT++LA E A IR N VAP +
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178
Query: 183 IKTSMIKPF 191
+ T M+
Sbjct: 179 VDTPMLAKL 187
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234 |
| >gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional | Back alignment and domain information |
|---|
Score = 179 bits (457), Expect = 7e-57
Identities = 72/191 (37%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLS 59
TAL+TG ++GIG A E GA V +R+ L E + +V G D+S
Sbjct: 11 TALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVS 70
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E R +++ V + L+IL+NNA K +D T ++ + TN S F LS+
Sbjct: 71 DDEDRRAILDWVEDHW-DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRY 129
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
AHPL K + +IV I SV G+ + S + YG K A+ Q+T+NLA EWA+D IR N VA
Sbjct: 130 AHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVA 189
Query: 180 PWVIKTSMIKP 190
PW I+T +
Sbjct: 190 PWYIRTPLTSG 200
|
Length = 257 |
| >gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 157 bits (400), Expect = 2e-48
Identities = 73/188 (38%), Positives = 95/188 (50%), Gaps = 4/188 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
A+VTG + GIG A E LA+ GA ++ N+ L E K +G D+S
Sbjct: 7 VAIVTGASGGIGRAIAELLAKEGAKVVIAY-DINEEAAQELLEEIKEEGGDAIAVKADVS 65
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
S E E L+E + F GK++IL+NNA I+ D+T E+ V N V L++
Sbjct: 66 SEEDVENLVEQIVEKF-GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRY 124
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P +G IV ISS+ G+ G LY A KGA+N TK LA E A IR N VA
Sbjct: 125 ALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVA 184
Query: 180 PWVIKTSM 187
P I T M
Sbjct: 185 PGAIDTEM 192
|
Length = 247 |
| >gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 153 bits (390), Expect = 8e-47
Identities = 70/188 (37%), Positives = 87/188 (46%), Gaps = 1/188 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTG +RGIG A LA GA V N+ +A E + G + V D+S
Sbjct: 7 TALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
LIE F G L+IL+NNA I ++ ED V N F++ + A
Sbjct: 67 AAVRALIEAAVEAF-GALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAAL 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + G IV ISSV GV G P + Y A K + TK LA E A I N VAP
Sbjct: 126 PPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPG 185
Query: 182 VIKTSMIK 189
I T M +
Sbjct: 186 FIDTDMTE 193
|
Length = 246 |
| >gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 153 bits (388), Expect = 1e-46
Identities = 75/197 (38%), Positives = 92/197 (46%), Gaps = 9/197 (4%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL---HEWKNKGFKVTGSVCD 57
ALVTG + GIG A LAR GA V +R E A + G + D
Sbjct: 6 KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAAD 65
Query: 58 LSS-REQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFH 115
+S E E L+ F G+++IL+NNA IA P ++T ED V N F
Sbjct: 66 VSDDEESVEALVAAAEEEF-GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFL 124
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
L++ A PL K IV ISSV G+ G P + Y A K A+ LTK LA E A IR
Sbjct: 125 LTRAALPLMKK---QRIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRV 181
Query: 176 NTVAPWVIKTSMIKPFE 192
N VAP I T M E
Sbjct: 182 NAVAPGYIDTPMTAALE 198
|
Length = 251 |
| >gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 4e-46
Identities = 61/191 (31%), Positives = 92/191 (48%), Gaps = 3/191 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG + GIG A GA V RN+ + R+ G + D+S
Sbjct: 7 VAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAE-RVAAEILAGGRAIAVAADVSDE 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E + F G ++IL+NNA P +D+ + + + N +S + +Q A
Sbjct: 66 ADVEAAVAAALERF-GSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAA 124
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + G G+IV ++S G+R P + Y A KGA+ LTK LA E D IR N VAP
Sbjct: 125 VPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAP 184
Query: 181 WVIKTSMIKPF 191
V++T +++ F
Sbjct: 185 VVVETGLLEAF 195
|
Length = 251 |
| >gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 3e-44
Identities = 63/191 (32%), Positives = 82/191 (42%), Gaps = 2/191 (1%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG RGIG A LA GA V + A + G K D+
Sbjct: 7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRD 66
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R + + F G+L+IL+ NA I + P ++ E V N F L+Q A
Sbjct: 67 RAALKAAVAAGVEDF-GRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAA 125
Query: 121 HPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P +G G IV SSV G R G P ++ Y A K + T+ LA E A NI N+V
Sbjct: 126 LPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNSVH 185
Query: 180 PWVIKTSMIKP 190
P + T M
Sbjct: 186 PGGVDTPMAGN 196
|
Length = 251 |
| >gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 145 bits (367), Expect = 3e-43
Identities = 65/190 (34%), Positives = 91/190 (47%), Gaps = 2/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG RG+G A LAR GA +V ++ + + + G + D++
Sbjct: 8 VALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTD 67
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ E + F G+++IL+NNA I KP D++ ++ V N VFHL +
Sbjct: 68 KAALEAAVAAAVERF-GRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAV 126
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + G IV ISSV G+ G P S Y A K + LTK LA E A+ I N VAP
Sbjct: 127 VPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAP 186
Query: 181 WVIKTSMIKP 190
I T M +
Sbjct: 187 GDIDTDMKEA 196
|
Length = 249 |
| >gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 1e-40
Identities = 65/189 (34%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG LA GA + SRN+ + + + +G + T CD+S
Sbjct: 7 VALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDVSDE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + +E + F GK++IL+NNA I P + + V N VF +SQ
Sbjct: 67 EAIKAAVEAIEEDF-GKIDILVNNAGIIRRHPAEEFPEAEWRDVIDVNLNGVFFVSQAVA 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
G+G I+ I S+ G P V Y A KG + LTK LA EWA+ I+ N +AP
Sbjct: 126 RHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAIAPG 185
Query: 182 VIKTSMIKP 190
T M +
Sbjct: 186 YFATEMTEA 194
|
Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 135 bits (342), Expect = 1e-39
Identities = 66/188 (35%), Positives = 92/188 (48%), Gaps = 2/188 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVH-TCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG A E LA GA V + ++ +A + E G K D+S
Sbjct: 8 ALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDA 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E E+ ++ + F G ++IL+NNA I + + ED V TN VF+L++
Sbjct: 68 ESVERAVDEAKAEF-GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVA 126
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+G I+ ISSV G+ G P + Y A K + TK+LA E A I N VAP
Sbjct: 127 RPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNAVAPG 186
Query: 182 VIKTSMIK 189
I+T M
Sbjct: 187 FIETDMTD 194
|
Length = 248 |
| >gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 3e-39
Identities = 71/186 (38%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG A +LA+ GA V R+ E + + E K G K G VCD+S R
Sbjct: 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + ++E + G ++IL+NNA I + + ED V TN VF+L+Q
Sbjct: 61 EDVKAVVEEIEEEL-GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVL 119
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+ +G I+ ISSV G+ G + Y A K + TK+LA E A NI N VAP
Sbjct: 120 RIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPG 179
Query: 182 VIKTSM 187
I T M
Sbjct: 180 FIDTDM 185
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 132 bits (335), Expect = 2e-38
Identities = 69/189 (36%), Positives = 97/189 (51%), Gaps = 5/189 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTGG GIG A E A GA VH C ++ L A G KVT +V D++
Sbjct: 13 RVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAAR--LPGAKVTATVADVADP 70
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLA 120
Q E++ +T F G L++L+NNA IA + +IT E + N F+ ++ A
Sbjct: 71 AQVERVFDTAVERF-GGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAA 129
Query: 121 HPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
PL KASG+G I+ +SSV G G P + Y A K A+ L K+LA E IR N +
Sbjct: 130 VPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAIL 189
Query: 180 PWVIKTSMI 188
P +++ +
Sbjct: 190 PGIVRGPRM 198
|
Length = 264 |
| >gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 8e-38
Identities = 68/192 (35%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG A LA GA V R++ + E K G D+S R
Sbjct: 2 VALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSDR 61
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI----AFVKPTVDITAEDMSTVSSTNFESVFHLS 117
E E L+E V + F G ++IL+NNA I ++ ++ ED V + N VF+++
Sbjct: 62 EAVEALVEKVEAEF-GPVDILVNNAGITRDNLLMR----MSEEDWDAVINVNLTGVFNVT 116
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
Q +G I+ ISSV G+ G P + Y A K + TK+LA E A I N
Sbjct: 117 QAVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176
Query: 178 VAPWVIKTSMIK 189
VAP I T M
Sbjct: 177 VAPGFIDTDMTD 188
|
This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240 |
| >gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 1e-37
Identities = 72/191 (37%), Positives = 99/191 (51%), Gaps = 8/191 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
A+VTGG+RGIG A LA GA V + + + E K G K CD+SS
Sbjct: 10 VAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYKCDVSS 69
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+E EK + + F GK++ILI NA I KP +D T E + V N VF+ +Q A
Sbjct: 70 QESVEKTFKQIQKDF-GKIDILIANAGITVHKPALDYTYEQWNKVIDVNLNGVFNCAQAA 128
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSL----YGAYKGAMNQLTKNLACEWAKDNIRTN 176
+FK G GS++ +S+ G I + Y A K A+ L K+LA EWAK IR N
Sbjct: 129 AKIFKKQGKGSLIITASMSGT--IVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFIRVN 186
Query: 177 TVAPWVIKTSM 187
+++P I T +
Sbjct: 187 SISPGYIDTDL 197
|
NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252 |
| >gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 4e-36
Identities = 60/180 (33%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVT + GIG A LAR GA V C+RN+ L+ E + G V V DL+
Sbjct: 2 KVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLTD 61
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E ++L+E F G+++IL+NNA P ++T ED SV + +
Sbjct: 62 PEDIDRLVEKAGDAF-GRVDILVNNAGGPPPGPFAELTDEDWLEAFDLKLLSVIRIVRAV 120
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P K G G IV ISS+ P++ L + + L K L+ E A D + N+V P
Sbjct: 121 LPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVLP 180
|
This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 2e-35
Identities = 70/185 (37%), Positives = 100/185 (54%), Gaps = 2/185 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVT T GIG A LA+ GA V SR Q +D + + +G VTG+VC + E
Sbjct: 13 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCHVGKAE 72
Query: 63 QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
RE+L+ T ++ G ++IL++NAA+ F +D T E + N ++ +++
Sbjct: 73 DRERLVATAVNLH-GGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVKATALMTKAVV 131
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + G GS+V +SSV P + Y K A+ LTKNLA E A NIR N +AP
Sbjct: 132 PEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNIRVNCLAPG 191
Query: 182 VIKTS 186
+IKTS
Sbjct: 192 LIKTS 196
|
This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 5e-35
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDAR--LHEWKNKGFKVTGSVCDL 58
T L+TGGT G+G A LA GA + SR A + E + G +VT + CD+
Sbjct: 2 TVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACDV 61
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+ R+ L+ + + G L+ +++NA + P ++T E V + ++L +
Sbjct: 62 ADRDALAALLAALPAAL-GPLDGVVHNAGVLDDGPLEELTPERFERVLAPKVTGAWNLHE 120
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
L L G+ V SSV GV G P + Y A A++ L ++ E
Sbjct: 121 LTRDL----DLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167
|
This family contains a wide variety of dehydrogenases. Length = 167 |
| >gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-34
Identities = 52/189 (27%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG + GIG A LA G V +RN +L++ L E N +V D++
Sbjct: 2 VVLITGCSSGIGLALALALAAQGYRVIATARNPDKLES-LGELLNDNLEVL--ELDVTDE 58
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + ++ V F G++++L+NNA P + + E++ + N +++
Sbjct: 59 ESIKAAVKEVIERF-GRIDVLVNNAGYGLFGPLEETSIEEVRELFEVNVFGPLRVTRAFL 117
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL + G+G IV +SSV G+ P + Y A K A+ L+++L E A I+ + P
Sbjct: 118 PLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEPG 177
Query: 182 VIKTSMIKP 190
++T
Sbjct: 178 PVRTGFADN 186
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248 |
| >gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 2e-34
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
AL+TG + GIG A + A+ GA + NQ +D L ++ G + G VCD++ +
Sbjct: 13 ALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDED 72
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+ ++ + G ++IL+NNA I P ++++AED V + + F +S+ P
Sbjct: 73 GVQAMVSQIEKEV-GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIP 131
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
G+G I+ I S+ G +VS Y A KG + LTKN+A E+ + NI+ N + P
Sbjct: 132 SMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGY 191
Query: 183 IKTSMIKPFEVLSVGIKG 200
I T P L
Sbjct: 192 IATPQTAPLRELQADGSR 209
|
Length = 265 |
| >gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR | Back alignment and domain information |
|---|
Score = 119 bits (301), Expect = 2e-33
Identities = 59/187 (31%), Positives = 85/187 (45%), Gaps = 3/187 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSS 60
A +TGG GIG A + A GA V R L+A E + + CD+
Sbjct: 5 VAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQCDVRD 64
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E E ++ F GK++ILINNAA F+ P ++ TV + F+ ++
Sbjct: 65 PEAVEAAVDETLKEF-GKIDILINNAAGNFLAPAESLSPNGFKTVIDIDLNGTFNTTKAV 123
Query: 121 HP-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
L +A GSI+ IS+ G P A K ++ LT++LA EW IR N +A
Sbjct: 124 GKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYGIRVNAIA 183
Query: 180 PWVIKTS 186
P I T+
Sbjct: 184 PGPIPTT 190
|
TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249 |
| >gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 119 bits (299), Expect = 2e-33
Identities = 61/189 (32%), Positives = 89/189 (47%), Gaps = 6/189 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTGG RG+G A L GA V E A E + D++
Sbjct: 7 VAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDAARFFH---LDVTDE 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ +++T F G+L++L+NNA I T E+ + N VF ++
Sbjct: 64 DGWTAVVDTAREAF-GRLDVLVNNAGILTGGTVETTTLEEWRRLLDINLTGVFLGTRAVI 122
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK--DNIRTNTVA 179
P K +G GSI+ +SS+ G+ G P+++ Y A KGA+ LTK+ A E A IR N+V
Sbjct: 123 PPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYGIRVNSVH 182
Query: 180 PWVIKTSMI 188
P I T M
Sbjct: 183 PGYIYTPMT 191
|
This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247 |
| >gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 118 bits (298), Expect = 3e-33
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGG+RGIG A LA GA +V +++ E + G K D+S
Sbjct: 1 ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ E++ V F G+L++L++NAA +P ++T +TN +++ H +Q A
Sbjct: 61 QDVEEMFAAVKERF-GRLDVLVSNAAAGAFRPLSELTPAHWDAKMNTNLKALVHCAQQAA 119
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
L + G G IV ISS+G +R +P+ G K A+ L + LA E IR N V+P
Sbjct: 120 KLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPG 179
Query: 182 VIKTSMIKPF 191
VI T + F
Sbjct: 180 VIDTDALAHF 189
|
This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 7e-33
Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTG GIG AT + LA GA V ++ +A E + G CD++
Sbjct: 425 ALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGVACDVTDEA 483
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+ E F G ++I+++NA IA P + + ED N F +++ A
Sbjct: 484 AVQAAFEEAALAF-GGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVR 542
Query: 123 LFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ KA G G SIVFI+S V P+ YGA K A L + LA E D IR N V P
Sbjct: 543 IMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNP 601
|
Length = 681 |
| >gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 1e-32
Identities = 65/201 (32%), Positives = 89/201 (44%), Gaps = 15/201 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG RGIG V +LA+ G V +R+ A + + + +G V D++
Sbjct: 2 VALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVTD 61
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAF-----VKPTVDITAEDMSTVSSTNFESVFH 115
E + V + G L+IL+NNA IAF PT + E M T NF
Sbjct: 62 DASIEAAADFVEEKY-GGLDILVNNAGIAFKGFDDSTPTREQARETMKT----NFFGTVD 116
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
++Q PL K S G IV +SS G YG K A+N LT+ LA E + I+
Sbjct: 117 VTQALLPLLKKSPAGRIVNVSSGLGSLTSA----YGVSKAALNALTRILAKELKETGIKV 172
Query: 176 NTVAPWVIKTSMIKPFEVLSV 196
N P +KT M +
Sbjct: 173 NACCPGWVKTDMGGGKAPKTP 193
|
PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225 |
| >gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 117 bits (295), Expect = 1e-32
Identities = 64/193 (33%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTGG+RG+G E L GA V +R EL+ + G D++
Sbjct: 14 TALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADE 73
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-LA 120
E+L E F G ++IL+NNA + P D E V + N +F LSQ +A
Sbjct: 74 ADIERLAEETLERF-GHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVA 132
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSL----YGAYKGAMNQLTKNLACEWAKDNIRTN 176
G G I+ ++SV G+ G P + Y KGA+ T+ LA EW IR N
Sbjct: 133 KRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVN 192
Query: 177 TVAPWVIKTSMIK 189
+AP T M +
Sbjct: 193 AIAPGFFPTKMTR 205
|
Length = 259 |
| >gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 2e-32
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 12/187 (6%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLSSR 61
ALVTG +GIG ATV+ LA+ GA V SR Q +LD+ + E G + VC DLS
Sbjct: 10 ALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRE--CPGIE---PVCVDLSDW 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ E+ + +V G +++L+NNAA+A ++P +++T E N +V H+SQ+
Sbjct: 65 DATEEALGSV-----GPVDLLVNNAAVAILQPFLEVTKEAFDRSFDVNVRAVIHVSQIVA 119
Query: 122 PLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A G GSIV +SS R + + ++Y + K A++ LTK +A E IR N+V P
Sbjct: 120 RGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRVNSVNP 179
Query: 181 WVIKTSM 187
V+ T M
Sbjct: 180 TVVMTDM 186
|
Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244 |
| >gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases | Back alignment and domain information |
|---|
Score = 117 bits (294), Expect = 2e-32
Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 2/201 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGG +GIG E LA+ G V N+ E G K D+S +
Sbjct: 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK 61
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+Q I+ F G ++++NNA +A + P ++IT E++ V + N + V Q A
Sbjct: 62 DQVFSAIDQAAEKF-GGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAA 120
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
FK G+ G I+ +S+ G G P +S Y + K A+ LT+ A E A I N P
Sbjct: 121 RQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCP 180
Query: 181 WVIKTSMIKPFEVLSVGIKGR 201
++KT M + + + I G+
Sbjct: 181 GIVKTPMWEEIDEETSEIAGK 201
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254 |
| >gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 6e-32
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTGG GIG AT AR GA V R+ + + + G + CD++
Sbjct: 10 ALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDA 69
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLAH 121
+ + L+E + + G+L+ NNA I + + + + + + N + V+ +
Sbjct: 70 EVKALVEQTIAAY-GRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQI 128
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL A G G+IV +SV G+ P +S+Y A K A+ LTK+ A E+AK IR N V P
Sbjct: 129 PLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPA 188
Query: 182 VIKTSMIKPF 191
VI T M +
Sbjct: 189 VIDTDMFRRA 198
|
Length = 253 |
| >gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 4e-31
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG RG+G A E LA GA V E + G + DL+
Sbjct: 9 RALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADP 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ + + G L+ L+NNA I K ++ + V + N F + + A
Sbjct: 69 ASVQRFFDAAAAAL-GGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAAL 127
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + SG G IV ++S + G P + Y A KGA+ +T++LA E I N +AP
Sbjct: 128 PHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAP 186
|
Length = 250 |
| >gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (286), Expect = 4e-31
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 2/182 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG GIG LA+ GA V N A + G K G D++
Sbjct: 6 VALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDE 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E I+ F G ++IL+NNA I V P D E + + + F ++ A
Sbjct: 66 EAINAGIDYAVETF-GGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAAL 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP- 180
P+ KA G G I+ ++SV G+ G + Y + K + LTK +A E A + N + P
Sbjct: 125 PIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPG 184
Query: 181 WV 182
+V
Sbjct: 185 YV 186
|
Length = 258 |
| >gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 7e-31
Identities = 63/188 (33%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL-HEWKNKGFKVTGSVCDLSS 60
A++TG +GIG A E LA G + N E E G+ D++
Sbjct: 4 VAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTD 63
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
++ E LI+ F G ++++NNA IA + P + IT ED+ V + N V Q A
Sbjct: 64 KDDVEALIDQAVEKF-GSFDVMVNNAGIAPITPLLTITEEDLKKVYAVNVFGVLFGIQAA 122
Query: 121 HPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
FK G G I+ SS+ GV+G P++ Y A K A+ LT+ A E A I N A
Sbjct: 123 ARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYA 182
Query: 180 PWVIKTSM 187
P ++KT M
Sbjct: 183 PGIVKTEM 190
|
2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 3e-30
Identities = 64/184 (34%), Positives = 93/184 (50%), Gaps = 2/184 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
A+VTGG GIG A LA+ GA V +A + G + G C+++S +
Sbjct: 2 AIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQ 61
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKP-TVDITAEDMSTVSSTNFESVFHLSQLAH 121
E +++ S F G + IL+NNA KP + +T ED N S F LSQL
Sbjct: 62 DLEAVVKATVSQF-GGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + +G G+I+ ISS+ ++ YG+ K A+N +T+NLA + IR N VAP
Sbjct: 121 PHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPG 180
Query: 182 VIKT 185
+KT
Sbjct: 181 AVKT 184
|
This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 115 bits (289), Expect = 4e-30
Identities = 60/193 (31%), Positives = 94/193 (48%), Gaps = 7/193 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
LVTG GIG A + AR G V RN R + G D+S
Sbjct: 8 VLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERA---DSLGPDHHALAMDVSDEA 64
Query: 63 QREKLIETVTSIFQGKLNILINNAAIA--FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
Q + E + F G++++L+NNA + + T+D T E+ + + + N + +++ A
Sbjct: 65 QIREGFEQLHREF-GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREA 123
Query: 121 HPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
L G+G +IV ++S G+ +P + Y A K A+ LT++LACEWA IR N V
Sbjct: 124 LRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVL 183
Query: 180 PWVIKTSMIKPFE 192
P ++T M+ E
Sbjct: 184 PGYVRTQMVAELE 196
|
Length = 520 |
| >gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 4e-30
Identities = 65/192 (33%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHT----CSRNQIELDARLHEWKNKGFKVTGSVC 56
L+TGG+ G+G A LA GA V R + E DA + G K G
Sbjct: 7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAF 66
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
D+ ++ F G+L+IL+NNA IA +++ E+ V N + F++
Sbjct: 67 DVRDFAATRAALDAGVEEF-GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNV 125
Query: 117 SQ-LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+Q P+ +A G IV I+SV GVRG Y A K + LTK LA E A I
Sbjct: 126 TQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGITV 185
Query: 176 NTVAPWVIKTSM 187
N VAP I T M
Sbjct: 186 NAVAPGAINTPM 197
|
Length = 249 |
| >gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 4e-30
Identities = 61/190 (32%), Positives = 87/190 (45%), Gaps = 2/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG GIG AT + AR GA V R+ + G + D+ S
Sbjct: 7 VAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGG-RAFARQGDVGSA 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E E L++ V + + G+L++L+NNA V D V N VF ++ A
Sbjct: 66 EAVEALVDFVAARW-GRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAI 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P+ + G GSIV +S + G + Y A KGA+ LT+ +A + A D IR N VAP
Sbjct: 125 PIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPG 184
Query: 182 VIKTSMIKPF 191
I T +
Sbjct: 185 TIDTPYFRRI 194
|
Length = 252 |
| >gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 5e-30
Identities = 61/187 (32%), Positives = 86/187 (45%), Gaps = 1/187 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTG GIG A LA GA V + +A + G V D++
Sbjct: 3 TALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVTKE 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ +I + F G L+IL+NNA I V P + ED + + S FH + A
Sbjct: 63 DEIADMIAAAAAEF-GGLDILVNNAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTIRAAL 121
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P K G G I+ I+S G+ P S Y A K + LTK LA E A+ I N + P
Sbjct: 122 PHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAICPG 181
Query: 182 VIKTSMI 188
++T ++
Sbjct: 182 YVRTPLV 188
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255 |
| >gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 6e-30
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 2/190 (1%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
TAL+TG + GIG ++LAR G + +R + +L+A E ++K G +V DLS
Sbjct: 7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLS 66
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E E+L + + G +++L+NNA P ++++ ++ + N ++ L++
Sbjct: 67 DPEALERLEDELKERG-GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKA 125
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P G G I+ I S G+ P +++Y A K + ++ L E ++ V
Sbjct: 126 VLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTAVC 185
Query: 180 PWVIKTSMIK 189
P +T
Sbjct: 186 PGPTRTEFFD 195
|
Length = 265 |
| >gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 9e-30
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
AL+TG + GIG AT LA GA V +R + L+A E D++
Sbjct: 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALAL--ALDVTD 64
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R E IE + F G+++IL+NNA +A P + +D + TN + + + ++
Sbjct: 65 RAAVEAAIEALPEEF-GRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAV 123
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P +G I+ + S+ G P ++YGA K A+ + L E A IR ++P
Sbjct: 124 LPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISP 183
Query: 181 WVIKTS 186
+++T+
Sbjct: 184 GLVETT 189
|
Length = 246 |
| >gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 9e-30
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
ALVTG +RGIG A + LAR GA +V+ S ++ + + E + G K D+S
Sbjct: 5 VALVTGASRGIGRAIAKRLARDGASVVVNYAS-SKAAAEEVVAEIEAAGGKAIAVQADVS 63
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
Q +L + F G ++IL+NNA + KP + + E+ + + N + F + Q
Sbjct: 64 DPSQVARLFDAAEKAF-GGVDILVNNAGVMLKKPIAETSEEEFDRMFTVNTKGAFFVLQE 122
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A + G I+ ISS P+ Y K A+ T+ LA E I N VA
Sbjct: 123 AAKRLR--DGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVA 180
Query: 180 PWVIKTSM 187
P + T M
Sbjct: 181 PGPVDTDM 188
|
1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 1e-29
Identities = 64/186 (34%), Positives = 93/186 (50%), Gaps = 8/186 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLS 59
A+VTGG GIGHA E A GA V R++ E+ A+L KG VCD+S
Sbjct: 17 VAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGL-----VCDVS 71
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ E + V S F G+++IL+N+A +A + P D++ ED N + F ++Q
Sbjct: 72 DSQSVEAAVAAVISAF-GRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQA 130
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A+G G IV ++S GV + Y A K + +TK LA EW I N ++
Sbjct: 131 VGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAIS 190
Query: 180 PWVIKT 185
P V+ T
Sbjct: 191 PTVVLT 196
|
Length = 255 |
| >gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 1e-29
Identities = 57/196 (29%), Positives = 81/196 (41%), Gaps = 7/196 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
A++TGG GIG AT + L + GA V RN+ A + N K T CD++S E
Sbjct: 3 AIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTSWE 62
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKP--TVDITAEDMSTVSSTNFESVFHLSQLA 120
Q + F G+++ILINNA I K N V + + LA
Sbjct: 63 QLAAAFKKAIEKF-GRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYLA 121
Query: 121 HPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW-AKDNIRTN 176
+ G IV I SV G+ P +Y A K + T++LA K +R N
Sbjct: 122 LHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRVN 181
Query: 177 TVAPWVIKTSMIKPFE 192
+ P T ++
Sbjct: 182 AICPGFTNTPLLPDLV 197
|
This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 1e-29
Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 1/188 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+TG RGIG A LA+ G V +R + L A E + G KV + D+S
Sbjct: 9 NALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E+ IE + + G ++ILINNA I+ +++ + + N V++ ++
Sbjct: 69 EEVTAAIEQLKNEL-GSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVL 127
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P +G I+ ISS G +G S Y A K + LT++L E K NIR + P
Sbjct: 128 PSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPS 187
Query: 182 VIKTSMIK 189
+ T M
Sbjct: 188 TVATDMAV 195
|
Length = 239 |
| >gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 2e-29
Identities = 63/179 (35%), Positives = 89/179 (49%), Gaps = 3/179 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTGG GIG A + LA GA V + E+ ++ E G + G CD++S
Sbjct: 4 ALVTGGASGIGLAIAKRLAAEGAAVVVADID-PEIAEKVAEAAQGGPRALGVQCDVTSEA 62
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
Q + E F G L+I+++NA IA P + + ED + N F +S+ A
Sbjct: 63 QVQSAFEQAVLEF-GGLDIVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAFR 121
Query: 123 LFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ K+ G G+IVF +S V P+ + Y A K A L + LA E +D IR NTV P
Sbjct: 122 IMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTVNP 180
|
This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 4e-29
Identities = 69/190 (36%), Positives = 96/190 (50%), Gaps = 4/190 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
A+VTGG G+G LA+ GA I+ T + RL E +G KVT DL+
Sbjct: 17 VAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIE--KEGRKVTFVQVDLTK 74
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E EK+++ F GK++IL+NNA P ++ ED + V N SV+HLSQ
Sbjct: 75 PESAEKVVKEALEEF-GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAV 133
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ G+G I+ I+S+ +G V Y A K + LTK A E A NI+ N +AP
Sbjct: 134 AKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAP 193
Query: 181 WVIKTSMIKP 190
IKT+ P
Sbjct: 194 GYIKTANTAP 203
|
Length = 258 |
| >gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 4e-29
Identities = 58/187 (31%), Positives = 89/187 (47%), Gaps = 2/187 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
A++TG GIG A GA V N + + E + G + CD++S +
Sbjct: 14 AIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQ 73
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+ L + S GK++IL+NNA KP D+ D N S FHLSQL P
Sbjct: 74 ELSALADFALSKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVAP 131
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
+ +G G I+ I+S+ +++ Y + K A + L +N+A + + NIR N +AP
Sbjct: 132 EMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGA 191
Query: 183 IKTSMIK 189
I T +K
Sbjct: 192 ILTDALK 198
|
Length = 255 |
| >gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 108 bits (271), Expect = 5e-29
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 11/185 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTGGTRGIG GA V C R E G D+
Sbjct: 8 VVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVD--------GRPAEFHAADVRDP 59
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+Q L++ + G+L++L+NNA + + + + N + ++Q A+
Sbjct: 60 DQVAALVDAIVERH-GRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAAN 118
Query: 122 PLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ + G GSIV I SV G R P + YGA K + LT++LA EWA +R N V
Sbjct: 119 AVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVV 177
Query: 181 WVIKT 185
+++T
Sbjct: 178 GLVRT 182
|
Length = 252 |
| >gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11 | Back alignment and domain information |
|---|
Score = 107 bits (269), Expect = 9e-29
Identities = 64/187 (34%), Positives = 94/187 (50%), Gaps = 5/187 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
A++TG + GIG T AR GA + R+ L+ G K+ V DL
Sbjct: 5 VAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLVVADL 64
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+ E ++++I T + F G+L+IL+NNA I D E+ V + N +V +L++
Sbjct: 65 TEEEGQDRIISTTLAKF-GRLDILVNNAGILAKGGGEDQDIEEYDKVMNLNLRAVIYLTK 123
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
LA P + G IV +SSV G R P V Y K A++Q T+ A E A +R N+V
Sbjct: 124 LAVPHLIKT-KGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVRVNSV 182
Query: 179 APWVIKT 185
+P VI T
Sbjct: 183 SPGVIVT 189
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253 |
| >gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 106 bits (268), Expect = 1e-28
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 4/189 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TGG GIG E A+ GA V N+ + + + G KV CD+S R
Sbjct: 1 IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E+ + + + G + ILINNA + K +++ E++ N + F ++
Sbjct: 61 EEVYEAAKKIKKEV-GDVTILINNAGVVSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE---WAKDNIRTNTV 178
P +G IV I+SV G+ ++ Y A K A ++L E + K I+T V
Sbjct: 120 PDMLERNHGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV 179
Query: 179 APWVIKTSM 187
P+ I T M
Sbjct: 180 CPYFINTGM 188
|
17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-28
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 3/179 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+TGG++GIG A E L G V +R+Q EL+ E NKG V G D+
Sbjct: 8 VALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAADVRDE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ ++ + + F G L++LI NA + P ++T E+ V TN F+ + A
Sbjct: 67 ADVQRAVDAIVAAF-GGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAV 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P K G G I+ ISS+ G + Y A K + ++ + + I+ +T+ P
Sbjct: 126 PALKRGG-GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMP 183
|
Length = 237 |
| >gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 107 bits (268), Expect = 1e-28
Identities = 63/186 (33%), Positives = 88/186 (47%), Gaps = 3/186 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG + GIG A LA GA V R++ + + + E K G K D+S
Sbjct: 5 VALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADVSK 64
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E L ++ F G L+IL+NNA + + ++T ED + V N F ++ A
Sbjct: 65 EEDVVALFQSAIKEF-GTLDILVNNAGLQGDASSHEMTLEDWNKVIDVNLTGQFLCAREA 123
Query: 121 HPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
F+ S G I+ +SSV P Y A KG + +TK LA E+A IR N +A
Sbjct: 124 IKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNAIA 183
Query: 180 PWVIKT 185
P I T
Sbjct: 184 PGAINT 189
|
GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253 |
| >gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-28
Identities = 58/188 (30%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ LVTG + GIG A LA+ GA V +RN LD E + ++ D+
Sbjct: 11 SVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL-----DVGDD 65
Query: 62 E-QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-L 119
R L G + L+N A IA ++ +D+TAE V + N +++ +
Sbjct: 66 AAIRAALAA------AGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHV 119
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A + A GSIV +SS + G+P Y A K A++ +T+ L E IR N+V
Sbjct: 120 ARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVN 179
Query: 180 PWVIKTSM 187
P V T M
Sbjct: 180 PTVTLTPM 187
|
Length = 245 |
| >gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 4e-28
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG LAR G V RN +L A G V D
Sbjct: 2 VALVTGASRGIGIEIARALARDGYRVSLGLRNPEDLAALSAS----GGDVEAVPYDARDP 57
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E L++ + F G++++L++NA I + + ++ S N + L++
Sbjct: 58 EDARALVDALRDRF-GRIDVLVHNAGIGRPTTLREGSDAELEAHFSINVIAPAELTRALL 116
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + +G+G +VF++S+ G R + + Y A K A+ L L E +R + V P
Sbjct: 117 PALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVCPG 176
Query: 182 VIKTSM 187
+ T M
Sbjct: 177 FVDTPM 182
|
This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223 |
| >gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 5e-28
Identities = 57/188 (30%), Positives = 84/188 (44%), Gaps = 19/188 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTGG+ GIG A V+EL GA V ++A +H + D+SS
Sbjct: 11 IIIVTGGSSGIGLAIVKELLANGANV---------VNADIHGGDGQHENYQFVPTDVSSA 61
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD---------ITAEDMSTVSSTNFES 112
E+ + + F G+++ L+NNA I + VD + + + N +
Sbjct: 62 EEVNHTVAEIIEKF-GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKG 120
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
VF +SQ +G IV +SS G+ G S Y A K A+N T++ A E K N
Sbjct: 121 VFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHN 180
Query: 173 IRTNTVAP 180
IR VAP
Sbjct: 181 IRVVGVAP 188
|
Length = 266 |
| >gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 5e-28
Identities = 65/187 (34%), Positives = 99/187 (52%), Gaps = 5/187 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
+VTG RGIG A LA+ G+ +V + E++ L K G + G + D+S+
Sbjct: 8 VVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST 67
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
RE E L + + G +IL+NNA + P +++ + + ST+F+SV + SQ
Sbjct: 68 REGCETLAKATIDRY-GVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQEL 126
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ G +IV I+SV G+R +S+YGA K A+ LTK LA E A IR N +AP
Sbjct: 127 AKEMREGG--AIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAIAP 183
Query: 181 WVIKTSM 187
+KT +
Sbjct: 184 GFVKTKL 190
|
Length = 252 |
| >gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4 | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 9e-28
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 4/183 (2%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTG +RGIG AT L G V C+R++ L A + + V G D+
Sbjct: 3 ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQ---ELEGVLGLAGDVRDEA 59
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+ ++ + F G L+ L+NNA + +KP ++T E+ V TN F+ A P
Sbjct: 60 DVRRAVDAMEEAF-GGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAAP 118
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
G G+IV + S+ G + Y A K + L++ + + NIR V P
Sbjct: 119 ALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVMPGS 178
Query: 183 IKT 185
+ T
Sbjct: 179 VDT 181
|
This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226 |
| >gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 3e-27
Identities = 57/191 (29%), Positives = 90/191 (47%), Gaps = 5/191 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG G G A+ GA V N + + + D++ R
Sbjct: 7 VAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAIAIQ---ADVTKR 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E ++E S F G+L+IL+NNA I KP +++ E+ V + N +S++ +Q
Sbjct: 64 ADVEAMVEAALSKF-GRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQAL 122
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + G G I+ I+S G+R P ++ Y A KG + TK +A E A NIR N + P
Sbjct: 123 VPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNCLCP 182
Query: 181 WVIKTSMIKPF 191
+T ++ F
Sbjct: 183 VAGETPLLSMF 193
|
This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248 |
| >gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 8e-27
Identities = 57/191 (29%), Positives = 82/191 (42%), Gaps = 13/191 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH------------EWKNKGF 49
A VTG +RGIG A LA+ GA V ++ E D E + G
Sbjct: 5 VAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAAGG 64
Query: 50 KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
+ V D+ +Q L+E F G+L+IL+NNA ++ D A+ + N
Sbjct: 65 QALPIVVDVRDEDQVRALVEATVDQF-GRLDILVNNAGAIWLSLVEDTPAKRFDLMQRVN 123
Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
+ LSQ A P +G G I+ IS +R Y A K M++LT LA E
Sbjct: 124 LRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAELR 183
Query: 170 KDNIRTNTVAP 180
+ I N++ P
Sbjct: 184 RHGIAVNSLWP 194
|
This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (256), Expect = 8e-27
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 3/188 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
A+VTG RG+G A A GA V +R + +LD + + G + DL+ E
Sbjct: 13 AVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE 72
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
L F G+L+I++NN P + + +D++ + N + L+ A P
Sbjct: 73 ATAGLAGQAVEAF-GRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVP 131
Query: 123 L-FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
L + SG GS++ ISS G + YG K A+ T+ A + IR N +AP
Sbjct: 132 LMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNAIAPG 190
Query: 182 VIKTSMIK 189
I TS ++
Sbjct: 191 SILTSALE 198
|
Length = 263 |
| >gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 9e-27
Identities = 61/188 (32%), Positives = 92/188 (48%), Gaps = 4/188 (2%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSR 61
L+TGG G+G AT LA+ GA + N+ L+A +V D+S
Sbjct: 7 LITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLA 120
Q E ++ F G+++ NNA I + T D A++ V S N VF+ +
Sbjct: 67 AQVEAYVDATVEQF-GRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFYGLEKV 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ + G+G IV +SVGG+RG+ + S Y A K + LT+N A E+ + IR N +AP
Sbjct: 126 LKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAP 185
Query: 181 WVIKTSMI 188
I T M+
Sbjct: 186 GAILTPMV 193
|
Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 2e-26
Identities = 57/189 (30%), Positives = 84/189 (44%), Gaps = 5/189 (2%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
+TGG G+G AT LA GA V R L L ++ G DL +
Sbjct: 10 VAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG--IDLVDPQ 67
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLAH 121
+ ++ V F G+L+ L+N A AFV T+ D A+ + N ++ + S+ A
Sbjct: 68 AARRAVDEVNRQF-GRLDALVNIAG-AFVWGTIADGDADTWDRMYGVNVKTTLNASKAAL 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P ASG G IV I + ++ P + Y A K + +LT+ LA E I N V P
Sbjct: 126 PALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPS 185
Query: 182 VIKTSMIKP 190
+I T +
Sbjct: 186 IIDTPPNRA 194
|
Length = 239 |
| >gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12 | Back alignment and domain information |
|---|
Score = 101 bits (252), Expect = 2e-26
Identities = 61/188 (32%), Positives = 82/188 (43%), Gaps = 5/188 (2%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
A+VTG GIG A LAR GA V + I+ A D++ +
Sbjct: 6 AIVTGAGAGIGAACAARLAREGARV-VVA--DIDGGAAQAVVAQIAGGALALRVDVTDEQ 62
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLAH 121
Q L E F G L++L+NNA + P + D + N F + A
Sbjct: 63 QVAALFERAVEEF-GGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCCRHAA 121
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P A G GSIV +SS+ G G P YGA K A+ LT+ LA E IR N +AP
Sbjct: 122 PRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALAPG 181
Query: 182 VIKTSMIK 189
+I T ++
Sbjct: 182 LIDTPLLL 189
|
These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246 |
| >gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 2e-26
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG T GIG A L + G V C+R + L + E + G + G CD+ S
Sbjct: 5 VALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDVRSV 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ--L 119
+ E L+ + + G +++L+NNA + T ++ E V TN VF +++ L
Sbjct: 65 PEIEALVAAAVARY-GPIDVLVNNAGRSGGGATAELADELWLDVVETNLTGVFRVTKEVL 123
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
G G I+ I+S GG +G+ + Y A K + TK L E A+ I N V
Sbjct: 124 KAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 183
Query: 180 PWVIKTSM 187
P ++T M
Sbjct: 184 PGFVETPM 191
|
Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258 |
| >gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6 | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 4e-26
Identities = 54/185 (29%), Positives = 86/185 (46%), Gaps = 1/185 (0%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
L+TG + GIG A E A+ G V +R LD E N V + D++ E
Sbjct: 1 VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+ + +I + G L+++I NA + D++ + TN + + A P
Sbjct: 61 RNQLVIAEL-EAELGGLDLVIINAGVGKGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
F+A G G +V ISSV +RG+P + Y A K A++ L ++L + K IR + P
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179
Query: 183 IKTSM 187
I T +
Sbjct: 180 IDTPL 184
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 5e-26
Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
++TG + GIG A LAR GA + +RN+ L + E + G + D+S
Sbjct: 3 VVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDA 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITA-EDMSTVSSTNFESVFHLSQLA 120
E E+LIE + F G ++IL+NNA I ++T V N+ + + A
Sbjct: 63 EACERLIEAAVARF-GGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAA 121
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P KAS G IV +SS+ G+ G+P+ S Y A K A++ +L E A D + V P
Sbjct: 122 LPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCP 180
Query: 181 WVIKT 185
+ T
Sbjct: 181 GFVAT 185
|
Length = 263 |
| >gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 6e-26
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TA+VTG GIG ELAR GA V NQ +A E G K G D+++
Sbjct: 9 TAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNE 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ I+ V F G ++IL++NA I V P + + D + + + + F ++ A
Sbjct: 69 DAVNAGIDKVAERF-GSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAAL 127
Query: 122 P-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
++K G ++++ SV P S Y K + L + LA E AK N+R++ V P
Sbjct: 128 KHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCP 187
Query: 181 WVIKTSMI 188
++T ++
Sbjct: 188 GFVRTPLV 195
|
Length = 262 |
| >gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 99.8 bits (249), Expect = 8e-26
Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 1/183 (0%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTG ++GIG+A E LA+ GA V R+ +L A K +G D++ +
Sbjct: 13 ALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHD 72
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
I+ + G ++IL+NNA + F P D A+ + TN SVF++ Q
Sbjct: 73 AVRAAIDAFEAEI-GPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVAR 131
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
A G G I+ I+SV P ++ Y A KGA+ LTK +A +WAK ++ N +AP
Sbjct: 132 HMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGY 191
Query: 183 IKT 185
T
Sbjct: 192 FDT 194
|
Length = 255 |
| >gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family | Back alignment and domain information |
|---|
Score = 99 bits (249), Expect = 9e-26
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 3 ALVTGGTRGIGHATVEELARFGA-------------IVHTCSRNQIELDARLHEWKNKGF 49
A +TG RG G A LA GA + +LD + G
Sbjct: 6 AFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVEALGR 65
Query: 50 KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
KV D+ + ++E F G+L++++ NA + + +++ E TV N
Sbjct: 66 KVLARKADVRDLAEVRAVVEDGVEQF-GRLDVVVANAGVLSYGRSWELSEEQWDTVLDIN 124
Query: 110 FESVFHLSQLAHP-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
V+ + P + + GSI+ SSV G++ +P ++ Y A K + LTK LA E
Sbjct: 125 LTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTLANEL 184
Query: 169 AKDNIRTNTVAPWVIKTSMIKP 190
A+ IR N++ P+ + T MI P
Sbjct: 185 AEYGIRVNSIHPYSVDTPMIAP 206
|
Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265 |
| >gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 99.4 bits (248), Expect = 1e-25
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG A LA G I +R++ + E + G K ++
Sbjct: 7 ALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E+ +++ + F G+L++ +NNAA ++P +++ + N +++ +Q A
Sbjct: 67 EKIKEMFAQIDEEF-GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAA 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
L + G G I+ +SS+G +R + + + G K A+ LT+ LA E A I N V+
Sbjct: 126 KLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGG 185
Query: 182 VIKTSMIKPF 191
+ T +K F
Sbjct: 186 AVDTDALKHF 195
|
Length = 250 |
| >gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 1e-25
Identities = 62/207 (29%), Positives = 87/207 (42%), Gaps = 23/207 (11%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLH-EWKNKGFKVTGSVC 56
++TG GIG T ELA+ GA V RN+ E A + E N KV
Sbjct: 2 KVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNA--KVEVIQL 59
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
DLSS + E + F +L+ILINNA I P +T + + N+ F L
Sbjct: 60 DLSSLASVRQFAEEFLARF-PRLDILINNAGIMA--PPRRLTKDGFELQFAVNYLGHFLL 116
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSLYGAY---KGAMNQLTK 162
+ L P+ KAS IV +SS+ G S Y AY K A T+
Sbjct: 117 TNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILFTR 176
Query: 163 NLACEWAKDNIRTNTVAPWVIKTSMIK 189
LA + N + P V++T +++
Sbjct: 177 ELARRLEGTGVTVNALHPGVVRTELLR 203
|
Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269 |
| >gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated | Back alignment and domain information |
|---|
Score = 99.0 bits (247), Expect = 1e-25
Identities = 62/188 (32%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTG +GIG A + L G V N+ A + G K D+S R+
Sbjct: 5 ALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD 64
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
Q + V F G LN+++NNA +A P IT E V + N V Q A
Sbjct: 65 QVFAAVRQVVDTF-GDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQE 123
Query: 123 LFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
FK G+G I+ +S GV G P +++Y + K A+ LT+ A + A + I N AP
Sbjct: 124 AFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPG 183
Query: 182 VIKTSMIK 189
++KT M+
Sbjct: 184 IVKTPMMF 191
|
Length = 256 |
| >gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 2e-25
Identities = 61/199 (30%), Positives = 89/199 (44%), Gaps = 10/199 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFG----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCD 57
ALVTG RGIG A EL G A + + + +++ V D
Sbjct: 4 IALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTD 63
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
+ IE +G ++IL+NNA I ++ ++ + V +TN SVF+++
Sbjct: 64 TEECAEALAEIEEE----EGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVT 119
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
Q G G I+ ISSV G++G + Y A K M TK LA E A+ I N
Sbjct: 120 QPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC 179
Query: 178 VAPWVIKTSMIK--PFEVL 194
+AP I T M++ EVL
Sbjct: 180 IAPGYIATPMVEQMGPEVL 198
|
Length = 245 |
| >gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 98.7 bits (246), Expect = 3e-25
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 9/195 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG +L GA V+ R +L E + +G K CD S
Sbjct: 6 ALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDHSDD 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAF-------VKPTVDITAEDMSTVSSTNFESVF 114
++ E L E V QG+L+IL+NNA A KP + +++ + +
Sbjct: 66 DEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVGLRAHY 125
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
S A PL +G G IV ISS GG+ + +V+ YG K A++++ ++A E +
Sbjct: 126 ACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVA-YGVGKAAIDRMAADMAHELKPHGVA 184
Query: 175 TNTVAPWVIKTSMIK 189
++ P ++T ++
Sbjct: 185 VVSLWPGFVRTELVL 199
|
This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265 |
| >gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 97.9 bits (244), Expect = 4e-25
Identities = 65/190 (34%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
ALVTG T GIG LA GA IV + E++A K G KV DLS
Sbjct: 4 VALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGADLS 63
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E ++ F G ++IL+NNA I V P D E + + N +VFH ++L
Sbjct: 64 KPAAIEDMVAYAQRQF-GGVDILVNNAGIQHVAPIEDFPTEKWDAIIALNLSAVFHTTRL 122
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P K G G I+ I+SV G+ + S Y A K + LTK +A E A + N +
Sbjct: 123 ALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCNAIC 182
Query: 180 PWVIKTSMIK 189
P + T +++
Sbjct: 183 PGWVLTPLVE 192
|
DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Score = 97.5 bits (243), Expect = 4e-25
Identities = 67/199 (33%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 3 ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNK----GFKVTGSVCD 57
ALVTGG GIG A + LA+ G + C N + R W + GF D
Sbjct: 3 ALVTGGMGGIGTAICQRLAKDGYRVAANCGPN----EERAEAWLQEQGALGFDFRVVEGD 58
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
+SS E + + V + G +++L+NNA I +T E S V TN SVF+++
Sbjct: 59 VSSFESCKAAVAKVEAE-LGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVT 117
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
Q + G G I+ ISSV G +G + Y A K M TK LA E A + NT
Sbjct: 118 QPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNT 177
Query: 178 VAPWVIKTSMIK--PFEVL 194
++P I T M+ +VL
Sbjct: 178 ISPGYIATDMVMAMREDVL 196
|
This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242 |
| >gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 4e-25
Identities = 53/185 (28%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
LVTG +GIG+A LA GA V RN +L + + + G+ D++
Sbjct: 1 VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+++++ + G +++L+N A I + ++ ED + N VF++SQ P
Sbjct: 61 AVDEVVQRLERE-YGPIDVLVNVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
K +G+IV + S ++ Y A K A+ LTK L E A IR N V+P
Sbjct: 120 RMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGS 179
Query: 183 IKTSM 187
T M
Sbjct: 180 TDTEM 184
|
Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250 |
| >gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8 | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 8e-25
Identities = 58/194 (29%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSS 60
L+TG IG A + L GA + N L+ E N +V D++S
Sbjct: 4 IILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELDITS 63
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAF---VKPTVDITAEDMSTVSSTNFESVFHLS 117
+E ++LIE+ F G+++ILINNA + + E + V + N F S
Sbjct: 64 KESIKELIESYLEKF-GRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFLCS 122
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-----------YGAYKGAMNQLTKNLAC 166
Q LFK G GSI+ I+S+ GV P + Y K + LTK LA
Sbjct: 123 QAFIKLFKKQGKGSIINIASIYGVIA-PDFRIYENTQMYSPVEYSVIKAGIIHLTKYLAK 181
Query: 167 EWAKDNIRTNTVAP 180
+A IR N ++P
Sbjct: 182 YYADTGIRVNAISP 195
|
This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 96.4 bits (240), Expect = 1e-24
Identities = 64/189 (33%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG G+G LA GA + R+ E + + G + DLS
Sbjct: 7 VALVTGANTGLGQGIAVGLAEAGADIVGAGRS--EPSETQQQVEALGRRFLSLTADLSDI 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + L+++ F G ++IL+NNA I + + +D V + N +SVF L+Q A
Sbjct: 65 EAIKALVDSAVEEF-GHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAA 123
Query: 122 PLFKASGN-GSIVFISSV----GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
F G G I+ I+S+ GG+R +PS Y A K A+ LTK LA EWA I N
Sbjct: 124 KHFLKQGRGGKIINIASMLSFQGGIR-VPS---YTASKHAVAGLTKLLANEWAAKGINVN 179
Query: 177 TVAPWVIKT 185
+AP + T
Sbjct: 180 AIAPGYMAT 188
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248 |
| >gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 2e-24
Identities = 59/188 (31%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TG + GIG A + AR GA V +R Q ELD + E + +G + D+
Sbjct: 8 VAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDE 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ L+ F G L+I NNA + P +++ E +TN S F ++
Sbjct: 68 AYAKALVALAVERF-GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQ 126
Query: 121 HPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P A G GS++F S+ VG G P ++ Y A K + LT+ LA E+ IR N +
Sbjct: 127 IPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALL 186
Query: 180 PWVIKTSM 187
P T M
Sbjct: 187 PGGTDTPM 194
|
Length = 254 |
| >gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5 | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 3e-24
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DL 58
T L+TG + GIG AT A+ GA + R L L + F V D+
Sbjct: 1 KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQE-LADELGAKFPVKVLPLQLDV 59
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLS 117
S RE E +E + F+ ++IL+NNA +A + P + ED T+ TN + + +++
Sbjct: 60 SDRESIEAALENLPEEFR-DIDILVNNAGLALGLDPAQEADLEDWETMIDTNVKGLLNVT 118
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+L P+ A G I+ + S+ G ++Y A K A+ Q + NL + IR
Sbjct: 119 RLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRVTN 178
Query: 178 VAPWVIKT 185
+ P +++T
Sbjct: 179 IEPGLVET 186
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 95.0 bits (237), Expect = 3e-24
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 8/190 (4%)
Query: 2 TALVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
++TG +RGIG A EEL + ++V +R++ E L E G +VT DLS
Sbjct: 1 VIILTGASRGIGRALAEELLKRGSPSVVVLLARSE-EPLQELKEELRPGLRVTTVKADLS 59
Query: 60 SREQREKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
E+L+E + + G+ ++LINNA + V I +++ N S L+
Sbjct: 60 DAAGVEQLLEAIRKLD-GERDLLINNAGSLGPVSKIEFIDLDELQKYFDLNLTSPVCLTS 118
Query: 119 LAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
FK G ++V +SS V LY + K A + + LA E + ++R +
Sbjct: 119 TLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAE--EPDVRVLS 176
Query: 178 VAPWVIKTSM 187
AP V+ T M
Sbjct: 177 YAPGVVDTDM 186
|
Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241 |
| >gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR | Back alignment and domain information |
|---|
Score = 96.0 bits (239), Expect = 3e-24
Identities = 59/200 (29%), Positives = 83/200 (41%), Gaps = 17/200 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TGGT +G A LA+ GA V RNQ + D E G + D+ R
Sbjct: 7 VAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAADVLDR 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTV--------------DITAEDMSTVSS 107
E+ E + + F G ++ILIN A T D+ E V
Sbjct: 67 ASLERAREEIVAQF-GTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEFVFD 125
Query: 108 TNFESVFHLSQ-LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
N F SQ + + G GSI+ ISS+ + V Y A K A++ T+ LA
Sbjct: 126 LNLNGSFLPSQVFGKDMLEQKG-GSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWLAV 184
Query: 167 EWAKDNIRTNTVAPWVIKTS 186
E+A +R N +AP T
Sbjct: 185 EFATTGVRVNAIAPGFFVTP 204
|
D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271 |
| >gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 3e-24
Identities = 66/196 (33%), Positives = 84/196 (42%), Gaps = 26/196 (13%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTG +RGIG A + LA+ GA V SR A G K C + E
Sbjct: 11 ALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEME 70
Query: 63 QREKLIETVTSIFQGKLNILINNAA-------------IAFVKPTVDITAEDMSTVSSTN 109
Q + L + G+L+IL+NNAA AF K TVD+ N
Sbjct: 71 QIDALFAHIRERH-GRLDILVNNAAANPYFGHILDTDLGAFQK-TVDV-----------N 117
Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
F +S A L K G GSIV ++SV GV +Y K A+ +TK A E A
Sbjct: 118 IRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECA 177
Query: 170 KDNIRTNTVAPWVIKT 185
IR N + P + T
Sbjct: 178 PFGIRVNALLPGLTDT 193
|
Length = 252 |
| >gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 95.2 bits (237), Expect = 4e-24
Identities = 67/191 (35%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCD 57
AL+TGGTRGIG A E R GA V N E +A+ E + KG K CD
Sbjct: 8 KVALITGGTRGIGRAIAEAFLREGAKV-AVLYNSAENEAK--ELREKGVFTIK-----CD 59
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
+ +R+Q +K E V F G++++L+NNA I ++ P + E + + N + +
Sbjct: 60 VGNRDQVKKSKEVVEKEF-GRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTT 118
Query: 118 QLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
PL K S NG+IV I+S G+ + Y K + LT+ LA E K IR N
Sbjct: 119 YEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVN 178
Query: 177 TVAPWVIKTSM 187
VAP ++T M
Sbjct: 179 AVAPGWVETDM 189
|
Length = 255 |
| >gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR | Back alignment and domain information |
|---|
Score = 94.8 bits (236), Expect = 6e-24
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 10/198 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
A+VTG +RGIG A ELA G + + + E G + D+
Sbjct: 3 VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHLSQ 118
E L++ F G+L+ L+NNA IA +D+T + + + N F L+Q
Sbjct: 63 LSDHEALLDQAWEDF-GRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQ 121
Query: 119 ------LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
+ P + SI+F++S+ P+ Y K ++ T+ LA A +
Sbjct: 122 AVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEG 181
Query: 173 IRTNTVAPWVIKTSMIKP 190
I + + P +I T M P
Sbjct: 182 IAVHEIRPGLIHTDMTAP 199
|
This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255 |
| >gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3 | Back alignment and domain information |
|---|
Score = 94.4 bits (235), Expect = 6e-24
Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 3/183 (1%)
Query: 5 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64
+TG + GIG AT A GA V +R+ L E + G + V D++ Q
Sbjct: 5 ITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADAAQV 64
Query: 65 EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124
E+ +T F G+++ +NNA +A D+T E+ V N+ + + A P
Sbjct: 65 ERAADTAVERF-GRIDTWVNNAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGTLAALPHL 123
Query: 125 KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTVAPWV 182
+ G G+++ + S+ G R P + Y A K A+ T++L E A D I V P
Sbjct: 124 RRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQPTA 183
Query: 183 IKT 185
+ T
Sbjct: 184 MNT 186
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233 |
| >gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 95.5 bits (238), Expect = 7e-24
Identities = 68/197 (34%), Positives = 96/197 (48%), Gaps = 19/197 (9%)
Query: 1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNKGFK---VTGS 54
AL+TGG GIG A A+ GA IV+ + E +G K + G
Sbjct: 47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE--KEGVKCLLIPGD 104
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT---VDITAEDMSTVSSTNFE 111
V D ++ + ETV + G+L+IL+NNAA F P DITAE + TN
Sbjct: 105 VSD--EAFCKDAVEETVREL--GRLDILVNNAA--FQYPQQSLEDITAEQLDKTFKTNIY 158
Query: 112 SVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
S FH+++ A P K G +I+ S+ G G ++ Y A KGA++ T++LA +
Sbjct: 159 SYFHMTKAALPHLK-QG-SAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQK 216
Query: 172 NIRTNTVAPWVIKTSMI 188
IR N VAP I T +I
Sbjct: 217 GIRVNAVAPGPIWTPLI 233
|
Length = 290 |
| >gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 97.2 bits (242), Expect = 9e-24
Identities = 58/187 (31%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVCDLS 59
+TGG RGIG A + A G + R+ A ++ + D++
Sbjct: 271 VVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQA-----DIT 325
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQ 118
E + + + G+L++L+NNA IA V KP+++ +AED + V N F ++
Sbjct: 326 DEAAVESAFAQIQARW-GRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACAR 384
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A S G IV + S+ + +P + Y A K A+ L+++LACEWA IR NTV
Sbjct: 385 AA--ARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTV 442
Query: 179 APWVIKT 185
AP I+T
Sbjct: 443 APGYIET 449
|
Length = 520 |
| >gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 94.3 bits (234), Expect = 9e-24
Identities = 63/187 (33%), Positives = 93/187 (49%), Gaps = 2/187 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTGG +GIG A LA+ GA +V + ++ + ++E +G V D+S
Sbjct: 9 AIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKV 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E +L+E + F GK++IL+NNA I + + ED V N SVF+ +
Sbjct: 69 EDANRLVEEAVNHF-GKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVL 127
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + G I+ ISS+ G G + Y A K M TK+LA E AK N+ N + P
Sbjct: 128 PYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPG 187
Query: 182 VIKTSMI 188
I T M+
Sbjct: 188 FIDTEMV 194
|
Length = 247 |
| >gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2 | Back alignment and domain information |
|---|
Score = 93.5 bits (233), Expect = 1e-23
Identities = 51/190 (26%), Positives = 74/190 (38%), Gaps = 11/190 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T L+TGGT GIG A + G V R + RL E K + + V D+
Sbjct: 7 TVLITGGTSGIGLALARKFLEAGNTVIITGRRE----ERLAEAKKELPNIHTIVLDVGDA 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFESVFHLS 117
E E L E + S + L+ILINNA I P + T TN L
Sbjct: 63 ESVEALAEALLSEYP-NLDILINNAGIQRPIDLRDP--ASDLDKADTEIDTNLIGPIRLI 119
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+ P K +IV +SS + + +Y A K A++ T L + +
Sbjct: 120 KAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTGVEVVE 179
Query: 178 VAPWVIKTSM 187
+ P + T +
Sbjct: 180 IVPPAVDTEL 189
|
Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228 |
| >gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 93.9 bits (234), Expect = 1e-23
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 16/202 (7%)
Query: 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
ALVTGG RGIG LA G + + EL A E + G +V D++
Sbjct: 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-----DITAEDMSTVSSTNFESVF 114
E +++ + + G+++ L+NNA + V D+T E V + N F
Sbjct: 63 DLSAHEAMLDAAQAAW-GRIDCLVNNAGVG---VKVRGDLLDLTPESFDRVLAINLRGPF 118
Query: 115 HLSQ------LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
L+Q LA P + + SIVF+SSV + P+ Y K ++ + A
Sbjct: 119 FLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARL 178
Query: 169 AKDNIRTNTVAPWVIKTSMIKP 190
A++ I V P +IKT M P
Sbjct: 179 AEEGIGVYEVRPGLIKTDMTAP 200
|
Length = 256 |
| >gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 1e-23
Identities = 58/184 (31%), Positives = 83/184 (45%), Gaps = 7/184 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTGG+RGIG + GA V +R E G + DLSS
Sbjct: 8 IVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIPADLSSE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E E L+ V +L++L+NNA + P V N +SVF L+Q
Sbjct: 67 EGIEALVARVAERSD-RLDVLVNNAGATWGAPLEAFPESGWDKVMDINVKSVFFLTQALL 125
Query: 122 PLFKASGN----GSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTN 176
PL +A+ ++ I S+ G+ + YGA K A++QLT+ LA E A ++I N
Sbjct: 126 PLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGEHITVN 185
Query: 177 TVAP 180
+AP
Sbjct: 186 AIAP 189
|
Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR | Back alignment and domain information |
|---|
Score = 93.5 bits (233), Expect = 1e-23
Identities = 56/183 (30%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----WKNKGFKVTGSVCD 57
L+TGG+ GIG A +EL + GA V +R++ +L+ + E G KV+ D
Sbjct: 3 HVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYISAD 62
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
LS E+ E+ G ++++N A I+ D+TAE+ N+ +++
Sbjct: 63 LSDYEEVEQAFAQAVEKG-GPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNVA 121
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
PL K G IVF+SS + GI S Y K A+ L ++L E NIR +
Sbjct: 122 HAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRVSV 181
Query: 178 VAP 180
V P
Sbjct: 182 VYP 184
|
These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239 |
| >gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR | Back alignment and domain information |
|---|
Score = 93.4 bits (232), Expect = 2e-23
Identities = 56/185 (30%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTG + GIG AT LA GA V +R L+A E + +G K D++ +
Sbjct: 6 ALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELDVTDEQ 65
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
Q + +E G+L+IL+NNA I + P D D + + TN + + + A P
Sbjct: 66 QVDAAVERTVEAL-GRLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYTTHAALP 124
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
G+IV ISSV G + + ++Y A K +N ++ L E + +R + P
Sbjct: 125 HHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVVIEPGT 184
Query: 183 IKTSM 187
+ T +
Sbjct: 185 VDTEL 189
|
CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243 |
| >gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 93.4 bits (233), Expect = 2e-23
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 8/191 (4%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL----DARLHEWKNKGFKVTGSVCDLS 59
++TG + GIG LAR GA + +R + L L V D+S
Sbjct: 7 IITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL---DMS 63
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E E+++E +F G L+ILINNA I+ D + + + N+ L++
Sbjct: 64 DLEDAEQVVEEALKLF-GGLDILINNAGISMRSLFHDTSIDVDRKIMEVNYFGPVALTKA 122
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P GSIV +SS+ G G+P + Y A K A+ +L E ++ NI V
Sbjct: 123 ALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVTVVC 182
Query: 180 PWVIKTSMIKP 190
P +I T++
Sbjct: 183 PGLIDTNIAMN 193
|
Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 93.2 bits (232), Expect = 2e-23
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 1/179 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG RG+G LA GA V RN L+A + + G D++
Sbjct: 13 VALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADE 72
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + + G+L+IL+NN +P ++ + + T+ + LS+LA
Sbjct: 73 EAVAAAFARIDAE-HGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAA 131
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
K G G I+ I+S+ G ++Y A K + L + LA E+ I +N +AP
Sbjct: 132 QRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAP 190
|
Length = 256 |
| >gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1 | Back alignment and domain information |
|---|
Score = 93.1 bits (232), Expect = 4e-23
Identities = 70/193 (36%), Positives = 96/193 (49%), Gaps = 12/193 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR-----LHEWKNKGFKVTGSVC 56
AL+TGG GIG A AR GA V + E DA + E K + G
Sbjct: 28 KALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCLLIPG--- 84
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFH 115
DL L++ V F GKL+IL+NNAA + ++ DIT E + TN S+F+
Sbjct: 85 DLGDESFCRDLVKEVVKEF-GKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFSMFY 143
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
L++ A P K G SI+ +SV +G P + Y A KGA+ T+ L+ + A+ IR
Sbjct: 144 LTKAALPHLK-KG-SSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIRV 201
Query: 176 NTVAPWVIKTSMI 188
N VAP I T +I
Sbjct: 202 NAVAPGPIWTPLI 214
|
These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270 |
| >gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.5 bits (228), Expect = 1e-22
Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
+TG GIG AT A G V N+ L A E G TG++ D++ R
Sbjct: 5 FITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAEL-GAGNAWTGAL-DVTDRAA 62
Query: 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
+ + + G+L++L NNA I P DI E V N + V + + A P
Sbjct: 63 WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPY 122
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
KA+ ++ SS + G P +++Y A K A+ LT+ L EW + IR V P +
Sbjct: 123 LKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFV 182
Query: 184 KTSMIK 189
T+M+
Sbjct: 183 DTAMLD 188
|
Length = 260 |
| >gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 91.2 bits (227), Expect = 1e-22
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+TG GIG A E GA I+ G D++ +
Sbjct: 8 VALLTGAASGIGEAVAERYLAEGA---RVVIADIKPARARLAALEIGPAAIAVSLDVTRQ 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-LA 120
+ ++++ F G ++IL NNAA+ + P +DI+ + + + N + +F L Q +A
Sbjct: 65 DSIDRIVAAAVERF-GGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVA 123
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ + G I+ ++S G RG VS Y A K A+ T++ A + I N +AP
Sbjct: 124 RHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAP 183
Query: 181 WVIKTSM 187
V+ T M
Sbjct: 184 GVVDTPM 190
|
Length = 257 |
| >gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 92.3 bits (230), Expect = 2e-22
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 9/189 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
++TG + G+G AT AR GA V +R + L+A E + G + V D++
Sbjct: 10 VVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADA 69
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + + G ++ +NNA + P D+T E+ V+ + V H + A
Sbjct: 70 EAVQAAADRAEEEL-GPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAAL 128
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+ G+I+ + S R IP S Y A K A+ T +L CE D
Sbjct: 129 RHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSP------- 181
Query: 182 VIKTSMIKP 190
+ +M++P
Sbjct: 182 -VSVTMVQP 189
|
Length = 334 |
| >gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional | Back alignment and domain information |
|---|
Score = 90.4 bits (225), Expect = 2e-22
Identities = 60/188 (31%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVC--- 56
AL+TGG R IG A L G +H R+ E DA E GS
Sbjct: 8 VALITGGARRIGAAIARTLHAAGYRVAIH-YHRSAAEADALAAELNALR---PGSAAALQ 63
Query: 57 -DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
DL + +L+ + F G+L+ L+NNA+ + P IT + ++N ++ F
Sbjct: 64 ADLLDPDALPELVAACVAAF-GRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFF 122
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
LSQ A P + G+IV I+ + R + +Y A K A+ LT++LA E A + +R
Sbjct: 123 LSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAPE-VRV 180
Query: 176 NTVAPWVI 183
N VAP I
Sbjct: 181 NAVAPGAI 188
|
Length = 249 |
| >gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 89.7 bits (223), Expect = 3e-22
Identities = 58/198 (29%), Positives = 81/198 (40%), Gaps = 15/198 (7%)
Query: 3 ALVTGGTRGIGHATVEEL-ARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG +RGIG V +L AR V R+ L ++ D++
Sbjct: 1 VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATE-LAALGASHSRLHILELDVTDE 59
Query: 62 EQREKLIETVTS-IFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQL 119
+ E V + L++LINNA I + +ED+ V N L+Q
Sbjct: 60 IA--ESAEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQA 117
Query: 120 AHPLFKASGNGSIVFISSVGG-----VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
PL I+ ISS G G Y A K A+N LTK+LA E +D I
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNTSG--GWYSYRASKAALNMLTKSLAVELKRDGIT 175
Query: 175 TNTVAP-WVIKTSMIKPF 191
++ P WV +T M PF
Sbjct: 176 VVSLHPGWV-RTDMGGPF 192
|
Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233 |
| >gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9 | Back alignment and domain information |
|---|
Score = 89.4 bits (222), Expect = 4e-22
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 2/196 (1%)
Query: 5 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64
+TG GIG T AR G V ++ L A E V G++ D++ R
Sbjct: 5 ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAEL-GAENVVAGAL-DVTDRAAW 62
Query: 65 EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124
+ + G+L+ L NNA + P D+ + N + V + + A P
Sbjct: 63 AAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAAHDRMVDINVKGVLNGAYAALPYL 122
Query: 125 KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK 184
KA+ ++ +S + G P +++Y A K A+ LT+ L EWA+ IR V PW +
Sbjct: 123 KATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADVWPWFVD 182
Query: 185 TSMIKPFEVLSVGIKG 200
T ++ E + KG
Sbjct: 183 TPILTKGETGAAPKKG 198
|
This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227 |
| >gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 89.3 bits (222), Expect = 7e-22
Identities = 56/190 (29%), Positives = 84/190 (44%), Gaps = 13/190 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI---ELDARLHEWKNKGFKVTGSVCDL 58
A+VTGG IG A L GA V + + A L G + D+
Sbjct: 8 VAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL------GERARFIATDI 61
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+ E+ + TV + F G+++IL+N A ++ + + D N S L+Q
Sbjct: 62 TDDAAIERAVATVVARF-GRVDILVNLACT-YLDDGLASSRADWLAALDVNLVSAAMLAQ 119
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
AHP G G+IV +S+ LY A K A+ QLT+++A + A D IR N+V
Sbjct: 120 AAHPHLARGG-GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSV 178
Query: 179 AP-WVIKTSM 187
+P W M
Sbjct: 179 SPGWTWSRVM 188
|
Length = 261 |
| >gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.9 bits (220), Expect = 1e-21
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
AL+TG + GIG GA V +R+ L+ E G KV CD+S +
Sbjct: 12 ALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQ 71
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA-H 121
Q +++ VT+ G ++I + NA I V P +D+ E+ + +TN VF +Q A
Sbjct: 72 QVTSMLDQVTAEL-GGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAK 130
Query: 122 PLFKASGNGSIVFISSVGG-VRGIPS-VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
+ K G I+ +S+ G + +P VS Y A K A+ LTK +A E A IR N+V+
Sbjct: 131 AMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVS 190
Query: 180 PWVIKTSMIKPF 191
P I T +++P+
Sbjct: 191 PGYILTELVEPY 202
|
Length = 253 |
| >gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 88.2 bits (219), Expect = 2e-21
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 7/187 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSS 60
ALVTG +GIG A AR GA V + + G +V D++
Sbjct: 10 ALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTD 69
Query: 61 REQ-REKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+ + G L++L+NNA I F P + +T ED + + + ++ +
Sbjct: 70 AASVAAAVAAAEEAF--GPLDVLVNNAGINVFADP-LAMTDEDWRRCFAVDLDGAWNGCR 126
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
P G GSIV I+S + IP Y K + LT+ L E+A N+R N +
Sbjct: 127 AVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAI 186
Query: 179 APWVIKT 185
AP I+T
Sbjct: 187 APGYIET 193
|
Length = 260 |
| >gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 2e-21
Identities = 60/194 (30%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWK-NKGFKVT-GSVCDLS 59
A +TG G+G A +A GA V N LDA E G V +V D++
Sbjct: 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
Q + L+ G L++L+NNA + I ++ V + N ES+F +
Sbjct: 62 DEAQWQALLAQAADAMGG-LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKH 120
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNT 177
A P +AS SIV ISSV + P + Y A K A+ LTK++A + A+ ++R N+
Sbjct: 121 ALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVRCNS 180
Query: 178 VAPWVIKTSMIKPF 191
+ P I+T ++ P
Sbjct: 181 IHPTFIRTGIVDPI 194
|
Length = 251 |
| >gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 3e-21
Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TAL+TG +GIG AR GA + + E++ E +G + T V D+
Sbjct: 8 TALITGALQGIGEGIARVFARHGANLILLDISP-EIEKLADELCGRGHRCTAVVADVRDP 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
I+ G+++IL+NNA + + +D++ ED N + V+++++
Sbjct: 67 ASVAAAIKRAKEKE-GRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVL 125
Query: 122 PLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P A +G IV +SSV G + P + Y K A+ LTK+LA E+A+ IR N + P
Sbjct: 126 PEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICP 185
Query: 181 WVIKTSMIK 189
++T M +
Sbjct: 186 GYVRTPMAE 194
|
Length = 263 |
| >gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.8 bits (218), Expect = 3e-21
Identities = 53/179 (29%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE--WKNKGFKVTGSVCDLS 59
A+VTGG+ GIG ATVE L GA V C R++ L + K G ++ + CD+
Sbjct: 10 VAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVL 69
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
V + F G +++L+NNA V D T + + SV + ++
Sbjct: 70 DEADVAAFAAAVEARF-GGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRA 128
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
PL +AS SIV ++S+ ++ P + A + + L K+LA E A +R N++
Sbjct: 129 FLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSI 187
|
Length = 265 |
| >gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 87.5 bits (217), Expect = 3e-21
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 5/190 (2%)
Query: 3 ALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
L+TG +GIG LA +GA I++ + + EL + + +G K + +++
Sbjct: 12 ILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVA--KLRQEGIKAHAAPFNVTH 69
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+++ E IE + G +++LINNA I P + ++ + V + N +VF +SQ
Sbjct: 70 KQEVEAAIEHIEKDI-GPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAV 128
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
G I+ I S+ G +++ Y A KGA+ LT+ + E A+ NI+ N +AP
Sbjct: 129 ARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAP 188
Query: 181 WVIKTSMIKP 190
KT M K
Sbjct: 189 GYFKTEMTKA 198
|
Length = 254 |
| >gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 87.2 bits (216), Expect = 4e-21
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 8/190 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLSSR 61
ALVTG + GIG A L + G V C+R +++A E ++ G+ CDLS+
Sbjct: 9 ALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQCDLSNE 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
EQ + + + QG +++ INNA +A +P + E + N ++ ++ A+
Sbjct: 69 EQILSMFSAIRTQHQG-VDVCINNAGLARPEPLLSGKTEGWKEMFDVNVLALSICTREAY 127
Query: 122 PLFKASG--NGSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACE--WAKDNIRT 175
K +G I+ I+S+ G R P Y A K A+ LT+ L E AK +IR
Sbjct: 128 QSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREAKTHIRA 187
Query: 176 NTVAPWVIKT 185
+++P +++T
Sbjct: 188 TSISPGLVET 197
|
Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.3 bits (214), Expect = 8e-21
Identities = 56/187 (29%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG GIG A E LAR GA V N + + G D+S
Sbjct: 8 VAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDP 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITA--EDMSTVSSTNFESVFHLSQ 118
+ + + + S F G ++ L+NNAAI +K + IT + S N + ++
Sbjct: 68 DSAKAMADATVSAF-GGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTR 126
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
+ G G+IV SS + YG K +N LT+ LA E NIR N +
Sbjct: 127 AVYKHMAKRGGGAIVNQSSTAA---WLYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAI 183
Query: 179 APWVIKT 185
AP I T
Sbjct: 184 APGPIDT 190
|
Length = 250 |
| >gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 8e-21
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 13/195 (6%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
A+VTGG++GIG A V L G+ V + FK D+S++E
Sbjct: 9 AIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS------YNDVDYFK-----VDVSNKE 57
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
Q K I+ V S + G+++IL+NNA I + ++ + + N +F +S+ P
Sbjct: 58 QVIKGIDYVISKY-GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIP 116
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
G I+ I+SV + + Y K A+ LT+++A ++A IR V P
Sbjct: 117 YMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAP-TIRCVAVCPGS 175
Query: 183 IKTSMIKPFEVLSVG 197
I+T +++ L VG
Sbjct: 176 IRTPLLEWAAELEVG 190
|
Length = 258 |
| >gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 9e-21
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 7/189 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+TG + GIG AT A+ G + +R+Q L+A E ++ G K DLS+
Sbjct: 8 RALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E I + F G ++LINNA +A+ P +++ D V N SVF
Sbjct: 68 EAIAPGIAELLEQF-GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVL 126
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAY---KGAMNQLTKNLACEWAKDNIRTNTV 178
P +A G G I+ +SS+ P +GAY K A+ TK LA E IR T+
Sbjct: 127 PGMRARGGGLIINVSSIAARNAFPQ---WGAYCVSKAALAAFTKCLAEEERSHGIRVCTI 183
Query: 179 APWVIKTSM 187
+ T +
Sbjct: 184 TLGAVNTPL 192
|
Length = 241 |
| >gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 86.1 bits (214), Expect = 1e-20
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 14/188 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T VTG +GIG+A GA V I D + + V D+S
Sbjct: 10 TVWVTGAAQGIGYAVALAFVEAGAKV-------IGFD--QAFLTQEDYPFATFVLDVSDA 60
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ + + + G L++L+N A I + T ++ ED + N F+L +
Sbjct: 61 AAVAQVCQRLLAE-TGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVM 119
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P F+ +G+IV + S +P + + YGA K A+ L K + E A +R N V+
Sbjct: 120 PQFRRQRSGAIVTVGSNAA--HVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVS 177
Query: 180 PWVIKTSM 187
P T M
Sbjct: 178 PGSTDTDM 185
|
Length = 252 |
| >gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 1e-20
Identities = 61/195 (31%), Positives = 86/195 (44%), Gaps = 18/195 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TGG +G A +ELAR GA V RNQ + +A + E K G + D+ +
Sbjct: 12 VAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDK 71
Query: 62 EQREKLIETVTSIFQGKLNILIN----NAAIAFVKPTVDITAEDMSTV---SSTNFESVF 114
E E+ + + F G +ILIN N A E T FE VF
Sbjct: 72 ESLEQARQQILEDF-GPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVF 130
Query: 115 HLSQL---------AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
L+ L A + G G+I+ ISS+ + V Y A K A++ T+ LA
Sbjct: 131 DLNLLGTLLPTQVFAKDMVGRKG-GNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWLA 189
Query: 166 CEWAKDNIRTNTVAP 180
+AK IR N +AP
Sbjct: 190 VHFAKVGIRVNAIAP 204
|
Length = 278 |
| >gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 86.2 bits (214), Expect = 1e-20
Identities = 62/182 (34%), Positives = 83/182 (45%), Gaps = 14/182 (7%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTGG GIG A LA GAI R+ E L + + V DL+
Sbjct: 11 IVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQ---VDLTDD 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
Q +E + F G+++ L+NNA V V + A + V+S ++ H +AH
Sbjct: 68 AQCRDAVEQTVAKF-GRIDGLVNNAG---VNDGVGLEAGREAFVASLE-RNLIHYYVMAH 122
Query: 122 ---PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
P KAS G+IV ISS + G S Y A KGA LT+ A AKD +R N V
Sbjct: 123 YCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAV 181
Query: 179 AP 180
P
Sbjct: 182 IP 183
|
Length = 258 |
| >gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 2e-20
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 3/184 (1%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
L+TG + GIG A E LA GA + RN +L+A G + V DL+S
Sbjct: 9 LLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPG-RHRWVVADLTSEAG 67
Query: 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
RE ++ + G +N+LINNA + D E + + + N + L++ PL
Sbjct: 68 REAVLARAREM--GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPL 125
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
+A + +V + S G G P + Y A K A+ ++ L E A +R +AP
Sbjct: 126 LRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRAT 185
Query: 184 KTSM 187
+T+M
Sbjct: 186 RTAM 189
|
Length = 263 |
| >gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 2e-20
Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 17/193 (8%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
AL+TGG GIG A VE GA V R+ +L + + + V D++S
Sbjct: 9 ALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGD---HVLVVEGDVTSYA 65
Query: 63 QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMST----VSSTNFESVFHLS 117
++ ++ F GKL+ + NA I + VDI AE + T + + N + +
Sbjct: 66 DNQRAVDQTVDAF-GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGA 124
Query: 118 QLAHPLFKASGNGSIVFISSVGGV---RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
+ A P KASG GS++F S G P LY A K A+ L + LA E A IR
Sbjct: 125 KAALPALKASG-GSMIFTLSNSSFYPGGGGP---LYTASKHAVVGLVRQLAYELAPK-IR 179
Query: 175 TNTVAPWVIKTSM 187
N VAP T +
Sbjct: 180 VNGVAPGGTVTDL 192
|
Length = 263 |
| >gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 3e-20
Identities = 53/189 (28%), Positives = 92/189 (48%), Gaps = 11/189 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+T +GIG A AR GA V N + +L E +G +T V D++ +
Sbjct: 4 VALITAAAQGIGRAIALAFAREGANVIATDIN----EEKLKEL-ERGPGITTRVLDVTDK 58
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
EQ L + G++++L N A +D +D + N S++ + +
Sbjct: 59 EQVAALAKEE-----GRIDVLFNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVL 113
Query: 122 PLFKASGNGSIVFISSVGG-VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P A +GSI+ +SSV ++G+P+ +Y K A+ LTK++A ++A+ IR N + P
Sbjct: 114 PKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAICP 173
Query: 181 WVIKTSMIK 189
+ T ++
Sbjct: 174 GTVDTPSLE 182
|
Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241 |
| >gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 3e-20
Identities = 52/187 (27%), Positives = 80/187 (42%), Gaps = 12/187 (6%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
+VTG +GIG A L + GA V + L + V + + RE
Sbjct: 1 VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRLTPLDVADAA---AVRE 57
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+L+ G ++ L+N A + T ++ ED + N VF+L Q P
Sbjct: 58 VCSRLLAEH-----GPIDALVNCAGVLRPGATDPLSTEDWEQTFAVNVTGVFNLLQAVAP 112
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
K G+IV ++S +P +S+ YGA K A+ L+K L E A +R N V+P
Sbjct: 113 HMKDRRTGAIVTVAS--NAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNVVSP 170
Query: 181 WVIKTSM 187
T+M
Sbjct: 171 GSTDTAM 177
|
2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244 |
| >gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 3e-20
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 17/201 (8%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
+ A+VTGG G+G ATVE L GA V + + + V D++S
Sbjct: 3 LVAVVTGGASGLGLATVERLLAQGAKVVILDLPN-SPGETVAKLGDNCRFVP---VDVTS 58
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD------ITAEDMSTVSSTNFESVF 114
+ + + + F G+L+I++N A IA T + + E V + N F
Sbjct: 59 EKDVKAALALAKAKF-GRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTF 117
Query: 115 HLSQLAHP-LFKASGN-----GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
++ +LA + K + G I+ +SV G + Y A KG + +T +A +
Sbjct: 118 NVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDL 177
Query: 169 AKDNIRTNTVAPWVIKTSMIK 189
A IR T+AP + T ++
Sbjct: 178 APQGIRVVTIAPGLFDTPLLA 198
|
HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252 |
| >gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.8 bits (210), Expect = 3e-20
Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 9/189 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFG----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCD 57
++TGG+ G+G A RFG +V ++ E + E K G + D
Sbjct: 9 VVVITGGSTGLGRAMAV---RFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGD 65
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
++ LI+T F G L+++INNA I P+ +++ ED + V +TN F S
Sbjct: 66 VTVESDVVNLIQTAVKEF-GTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGS 124
Query: 118 QLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+ A F G+I+ +SSV P Y A KG + +T+ LA E+A IR N
Sbjct: 125 REAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVN 184
Query: 177 TVAPWVIKT 185
+ P I T
Sbjct: 185 NIGPGAINT 193
|
Length = 261 |
| >gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 4e-20
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSR 61
A+VTG T GIG A EELA+ G V SR Q +LDA E + K G + D S+
Sbjct: 4 AVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADFSAG 63
Query: 62 EQR-EKLIETVTSIFQGKLNILINNAAIAFVKPTV--DITAEDMSTVSSTNFESVFHLSQ 118
+ E++ + + + G IL+NN I+ P + +++ + + N + +++
Sbjct: 64 DDIYERIEKELEGLDIG---ILVNNVGISHSIPEYFLETPEDELQDIINVNVMATLKMTR 120
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
L P G+IV ISS G+ P ++ Y A K ++ ++ L E+ I ++
Sbjct: 121 LILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQGIDVQSL 180
Query: 179 APWVIKTSMIK 189
P+++ T M K
Sbjct: 181 LPYLVATKMSK 191
|
This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239 |
| >gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 84.4 bits (209), Expect = 5e-20
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 7/189 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLSSR 61
A++TGG GIG AT A+ GA V I+ DA G V CD++
Sbjct: 7 AIITGGASGIGEATARLFAKHGARVVIAD---IDDDAGQAVAAELGDPDISFVHCDVTVE 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHLSQL 119
++T + F G+L+I+ NNA + ++ + E+ V N F ++
Sbjct: 64 ADVRAAVDTAVARF-GRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGTKH 122
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A + + GSIV ++SV GV G Y A K A+ LT++ A E + IR N V+
Sbjct: 123 AARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNCVS 182
Query: 180 PWVIKTSMI 188
P+ + T ++
Sbjct: 183 PYGVATPLL 191
|
Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249 |
| >gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Score = 84.2 bits (208), Expect = 5e-20
Identities = 64/186 (34%), Positives = 95/186 (51%), Gaps = 6/186 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
ALVTG + GIG L GAIV +L+A E G +V +LS R+
Sbjct: 9 ALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRD 65
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS-QLAH 121
+ + L + + +G ++IL+NNA I V ++ ED +V N + F L+ +L H
Sbjct: 66 EVKALGQKAEADLEG-VDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTH 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P+ + G I+ I+SV GV G P + Y A K M +K+LA E A N+ N VAP
Sbjct: 125 PMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPG 183
Query: 182 VIKTSM 187
I+++M
Sbjct: 184 FIESAM 189
|
Length = 245 |
| >gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7 | Back alignment and domain information |
|---|
Score = 83.6 bits (207), Expect = 8e-20
Identities = 56/190 (29%), Positives = 82/190 (43%), Gaps = 14/190 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
T LVTG RGIG A VE L GA V+ R+ H G KV D++
Sbjct: 5 TVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAA---HLVAKYGDKVVPLRLDVTD 61
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS---STNFESVFHLS 117
E + + +++INNA + KP + + + N + L+
Sbjct: 62 PESIKAAAAQAKDV-----DVVINNAGVL--KPATLLEEGALEALKQEMDVNVFGLLRLA 114
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
Q P+ KA+G G+IV ++SV ++ P++ Y A K A LT+ L E A +
Sbjct: 115 QAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVLS 174
Query: 178 VAPWVIKTSM 187
V P I T M
Sbjct: 175 VHPGPIDTRM 184
|
These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235 |
| >gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 1e-19
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 2/179 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+V GGT GI + AR GA V SR+Q ++DA + + + G + G D+
Sbjct: 11 NVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY 70
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + F G +++L++ AA F P ++A TV + F++ + A+
Sbjct: 71 AAVEAAFAQIADEF-GPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAY 129
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
PL + G SI+ IS+ +P + A K ++ LT+ LA EW + IR N++ P
Sbjct: 130 PLLRRPG-ASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVP 187
|
Length = 264 |
| >gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 83.1 bits (206), Expect = 1e-19
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 4/183 (2%)
Query: 3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGGT+G+G A A GA + C RN + +A+ E + G K DLS
Sbjct: 9 ALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDV 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E +++ F G+L+ L+N A + +D + E + N + F L Q A
Sbjct: 69 EDCRRVVAAADEAF-GRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAI 127
Query: 122 PLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
L + G+IV I S+ G P ++ Y A KGA+ LT+N A ++ IR N +
Sbjct: 128 KLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNI 187
Query: 181 -WV 182
W+
Sbjct: 188 GWM 190
|
Length = 260 |
| >gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 2e-19
Identities = 54/194 (27%), Positives = 80/194 (41%), Gaps = 5/194 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
ALVTG + IG A E LA G +VH +R++ E E DLS
Sbjct: 2 VALVTGAAKRIGRAIAEALAAEGYRVVVH-YNRSEAEAQRLKDELNALRNSAVLVQADLS 60
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
L+ F G+ ++L+NNA+ + P + + + + N ++ + L Q
Sbjct: 61 DFAACADLVAAAFRAF-GRCDVLVNNASAFYPTPLGQGSEDAWAELFGINLKAPYLLIQA 119
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
S NGSI+ I R + Y K A+ LT++ A E A NIR N +A
Sbjct: 120 FARRLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAP-NIRVNGIA 178
Query: 180 PWVIKTSMIKPFEV 193
P +I E
Sbjct: 179 PGLILLPEDMDAEY 192
|
Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234 |
| >gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 3e-19
Identities = 57/188 (30%), Positives = 85/188 (45%), Gaps = 13/188 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
LVTG G+G A A GA V ++ D + E K G K
Sbjct: 7 VVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAAGGK-- 64
Query: 53 GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
+V + S E EK+++T F G+++IL+NNA I + ++ ED V + +
Sbjct: 65 -AVANYDSVEDGEKIVKTAIDAF-GRVDILVNNAGILRDRSFAKMSEEDWDLVMRVHLKG 122
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
F +++ A P + G I+ SS G+ G + Y A K + L+ LA E AK N
Sbjct: 123 SFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIEGAKYN 182
Query: 173 IRTNTVAP 180
I NT+AP
Sbjct: 183 ITCNTIAP 190
|
Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 5e-19
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 5/190 (2%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
L+TG + GIG AT ++A GA V +RN LD + E + KG CDL+
Sbjct: 375 LITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAA 434
Query: 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDIT--AEDMSTVSSTNFESVFHLSQLAH 121
+ ++ + + G ++ L+NNA + + + T D + N+ L
Sbjct: 435 VDHTVKDILAEH-GHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLL 493
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR-TNTVAP 180
P + G +V +SS+G P S Y A K A++ + A E D I T P
Sbjct: 494 PHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMP 553
Query: 181 WVIKTSMIKP 190
V +T MI P
Sbjct: 554 LV-RTPMIAP 562
|
Length = 657 |
| >gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 81.6 bits (202), Expect = 5e-19
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 7/190 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
A+VT GIG A LA+ G I + A E ++ G + DL
Sbjct: 4 VAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAE--EVRSHGVRAEIRQLDL 61
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
S + + ++ + G++++L+NNA P +D+ ++ + + + + F SQ
Sbjct: 62 SDLPEGAQALDKLIQRL-GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQ 120
Query: 119 LA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+A + K G I+ I+SV +P S Y A K A+ LTK +A E + I N
Sbjct: 121 IAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILVNA 180
Query: 178 VAPWVIKTSM 187
VAP I T M
Sbjct: 181 VAPGAIATPM 190
|
Length = 256 |
| >gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 5e-19
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLS 59
ALVTG + G+G + LA+ GA V SR EL A + V+ V D
Sbjct: 12 ALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQ 71
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
S + ET G ++IL+NN+ ++ + VD+T D V TN F ++Q
Sbjct: 72 SIKAAVAHAETEA----GTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQE 127
Query: 120 AHPLFKASGNGS--------IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
A G+ I+ I+SV G+R +P + LY K A+ +T+ +A EW +
Sbjct: 128 VAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGRH 187
Query: 172 NIRTNTVAPWVIKTSM 187
I N + P I T +
Sbjct: 188 GINVNAICPGYIDTEI 203
|
Length = 258 |
| >gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 6e-19
Identities = 69/198 (34%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK----GFKVTGSVCD 57
ALVTGG+RGIG AT LA+ G +T + N + E N G K D
Sbjct: 3 IALVTGGSRGIGRATALLLAQEG---YTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQAD 59
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVF-- 114
+S Q + + L L+NNA I F + TV+ +TAE ++ V STN F
Sbjct: 60 ISDENQVVAMFTAIDQH-DEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLC 118
Query: 115 ---HLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWA 169
+ ++A K G+G +IV +SS G P + Y A KGA++ LT L+ E A
Sbjct: 119 CREAVKRMAL---KHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVA 175
Query: 170 KDNIRTNTVAPWVIKTSM 187
IR N V P I T M
Sbjct: 176 AQGIRVNCVRPGFIYTEM 193
|
Length = 247 |
| >gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 83.4 bits (206), Expect = 8e-19
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 6/182 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLS 59
A VTGG GIG T LA GA V N +A E N F + D++
Sbjct: 417 AFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEI-NGQFGAGRAVALKMDVT 475
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ + V + G ++I++NNA IA P + T ++ F +++
Sbjct: 476 DEQAVKAAFADVALAY-GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVARE 534
Query: 120 AHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A + G G+IVFI+S V + S Y A K A L + LA E IR NTV
Sbjct: 535 AFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTV 594
Query: 179 AP 180
P
Sbjct: 595 NP 596
|
Length = 676 |
| >gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 1e-18
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 6/184 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TAL+TGGT GIG T + GA V R+ L+A E G D
Sbjct: 8 TALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDV 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ L + + F G+L+ + NA +A P D +TN + + L Q
Sbjct: 65 AAQKALAQALAEAF-GRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALL 123
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL + SIV S+ G+P+ S+Y A K A+ L K L+ E IR N V+P
Sbjct: 124 PLL--ANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPG 181
Query: 182 VIKT 185
++T
Sbjct: 182 PVQT 185
|
Length = 249 |
| >gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 1e-18
Identities = 57/190 (30%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLS 59
+VTG +GIG A GA V R+++ E+ A L G + DL
Sbjct: 10 VVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRA---AGGEALALTADLE 66
Query: 60 SREQREKLIETVTSIFQGKLNILINN--AAIAFVKP-----TVDITAEDMSTVSSTNFES 112
+ + + F G++++LINN I + KP I AE + + F +
Sbjct: 67 TYAGAQAAMAAAVEAF-GRIDVLINNVGGTI-WAKPFEEYEEEQIEAE----IRRSLFPT 120
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSV--GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
++ + P A G G+IV +SS+ G+ +P Y A KG +N LT +LA E+A+
Sbjct: 121 LW-CCRAVLPHMLAQGGGAIVNVSSIATRGINRVP----YSAAKGGVNALTASLAFEYAE 175
Query: 171 DNIRTNTVAP 180
IR N VAP
Sbjct: 176 HGIRVNAVAP 185
|
Length = 260 |
| >gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR | Back alignment and domain information |
|---|
Score = 80.4 bits (198), Expect = 1e-18
Identities = 55/187 (29%), Positives = 83/187 (44%), Gaps = 5/187 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TAL+TG RGIG A + R GA V N A E ++ V D +S
Sbjct: 5 TALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIGPAACAISLDVTDQASI 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ + + + G ++IL+NNAA+ + P VDIT E + + N + Q
Sbjct: 65 DR---CVAALVDRW-GSIDILVNNAALFDLAPIVDITRESYDRLFAINVSGTLFMMQAVA 120
Query: 122 PLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A G G I+ ++S G RG V +Y A K A+ LT++ + I N +AP
Sbjct: 121 RAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAP 180
Query: 181 WVIKTSM 187
V+
Sbjct: 181 GVVDGEH 187
|
This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254 |
| >gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 2e-18
Identities = 56/193 (29%), Positives = 81/193 (41%), Gaps = 16/193 (8%)
Query: 2 TALVTGGTR--GIGHATVEELARFGAIV--HTCSRNQIELDARLH---------EWKNKG 48
ALVTG +R GIG A LA G + S + +H E ++ G
Sbjct: 7 IALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG 66
Query: 49 FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST 108
+ DLS ++ V+ G +ILINNAA + ++TAE + +
Sbjct: 67 VRCEHMEIDLSQPYAPNRVFYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAV 125
Query: 109 NFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMNQLTKNLACE 167
N + LS + G I+ ++S G G +P Y A KGA+ TK+LA E
Sbjct: 126 NVRATMLLSSAFAKQYDGKAGGRIINLTS-GQSLGPMPDELAYAATKGAIEAFTKSLAPE 184
Query: 168 WAKDNIRTNTVAP 180
A+ I N V P
Sbjct: 185 LAEKGITVNAVNP 197
|
Length = 256 |
| >gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 80.3 bits (198), Expect = 2e-18
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 14/190 (7%)
Query: 3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG G+G LA G IV E ++ + +T DL
Sbjct: 13 AVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTA---DLRKI 69
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ L+E + F G ++IL+NNA + + ++ + +D V + N +SVF +SQ A
Sbjct: 70 DGIPALLERAVAEF-GHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAA 128
Query: 122 PLFKASGN-GSIVFISSV----GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
F A GN G I+ I+S+ GG+R +PS Y A K + +T+ +A EWAK NI N
Sbjct: 129 KHFIAQGNGGKIINIASMLSFQGGIR-VPS---YTASKSGVMGVTRLMANEWAKHNINVN 184
Query: 177 TVAPWVIKTS 186
+AP + T+
Sbjct: 185 AIAPGYMATN 194
|
Length = 253 |
| >gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 80.2 bits (198), Expect = 2e-18
Identities = 52/188 (27%), Positives = 90/188 (47%), Gaps = 4/188 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TG + GIG A+ LA+ GA V + + + K+ G K D+S
Sbjct: 8 VAVITGASTGIGQASAIALAQEGAYV-LAVDIAEAVSETVDKIKSNGGKAKAYHVDISDE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLA 120
+Q + + F G++++L NNA + + + + + + + F ++++
Sbjct: 67 QQVKDFASEIKEQF-GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKML 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
PL G GSI+ SS G S Y A KGA+ TK++A E+ +D IR N +AP
Sbjct: 126 LPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAP 184
Query: 181 WVIKTSMI 188
I+T ++
Sbjct: 185 GTIETPLV 192
|
Length = 272 |
| >gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.7 bits (196), Expect = 3e-18
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 8/191 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG A LA GA+V RN+ D + E ++ G K DL+S
Sbjct: 9 ALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSI 68
Query: 62 EQREKLIETVTSIFQ-----GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
+ +KL+E + + Q +++IL+NNA I + T E + + N ++ F L
Sbjct: 69 DGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFL 128
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
Q PL +A G ++ ISS G YG KGA+N +T LA + I N
Sbjct: 129 IQQTLPLLRAEGR--VINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGITVN 186
Query: 177 TVAPWVIKTSM 187
T+ P KT +
Sbjct: 187 TIMPGYTKTDI 197
|
Length = 254 |
| >gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR | Back alignment and domain information |
|---|
Score = 79.4 bits (196), Expect = 3e-18
Identities = 52/192 (27%), Positives = 81/192 (42%), Gaps = 11/192 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
LVTG +RG+G A AR GA +V R+ +A E + + V D
Sbjct: 2 VVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIAIQADVRD--- 58
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFV------KPTVDITAEDMSTVSSTNFESVF 114
R+Q + +IE + F G ++ ++NNA I F K I ED +
Sbjct: 59 RDQVQAMIEEAKNHF-GPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGAL 117
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
+L Q P FK G+G ++ I + + Y K A+ T+N+A E I
Sbjct: 118 NLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGIT 177
Query: 175 TNTVAPWVIKTS 186
N V+ ++K +
Sbjct: 178 VNMVSGGLLKVT 189
|
This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246 |
| >gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 79.5 bits (196), Expect = 3e-18
Identities = 54/179 (30%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
+VTG +GIG E LA GA V R+++ + L E G DL +
Sbjct: 7 VVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEV-LAEILAAGDAAHVHTADLETYA 65
Query: 63 QREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ ++ F G++++LINN + KP E + + +
Sbjct: 66 GAQGVVRAAVERF-GRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWCCRAVL 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P G IV +SS+ RGI + Y A KG +N LT +LA E A+D IR N VAP
Sbjct: 125 PHMLERQQGVIVNVSSIA-TRGIYRIP-YSAAKGGVNALTASLAFEHARDGIRVNAVAP 181
|
DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256 |
| >gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 79.2 bits (196), Expect = 4e-18
Identities = 54/185 (29%), Positives = 87/185 (47%), Gaps = 16/185 (8%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGGT+GIG ATV L GA V T +R++ + L V DL++
Sbjct: 12 ALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPE----------GVEFVAADLTTA 61
Query: 62 EQREKLIETVTSIFQGKLNILINNA--AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E + V G ++IL++ + A +T E+ + N + L +
Sbjct: 62 EGCAAVARAVLERL-GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRA 120
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
P A G+G I+ ++S+ +P + Y A K A++ +K+L+ E A +R NTV
Sbjct: 121 LLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTV 180
Query: 179 AP-WV 182
+P W+
Sbjct: 181 SPGWI 185
|
Length = 260 |
| >gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 78.4 bits (193), Expect = 6e-18
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 7/189 (3%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL----S 59
LVTG + GIG AR+GA V RN+ +L +G L
Sbjct: 8 LVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEG-GRQPQWFILDLLTC 66
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+ E ++L + + + +L+ +++NA + V P + + V N + F L+Q
Sbjct: 67 TSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATFMLTQ 125
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
PL S GS+VF SS G +G + Y K A L + LA E+ + N+R N +
Sbjct: 126 ALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLRVNCI 185
Query: 179 APWVIKTSM 187
P +T+M
Sbjct: 186 NPGGTRTAM 194
|
Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236 |
| >gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.8 bits (195), Expect = 7e-18
Identities = 53/186 (28%), Positives = 86/186 (46%), Gaps = 9/186 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG + GIG AT E+LAR G V SRN V D++
Sbjct: 6 VALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG--------VELLELDVTDD 57
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ ++ V + G++++L+NNA + + + + TN + +++
Sbjct: 58 ASVQAAVDEVIARA-GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVL 116
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P +A G+G I+ ISSV G P ++LY A K A+ +++L E + IR + V P
Sbjct: 117 PHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPA 176
Query: 182 VIKTSM 187
KT+
Sbjct: 177 YTKTNF 182
|
Length = 270 |
| >gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR | Back alignment and domain information |
|---|
Score = 78.7 bits (194), Expect = 8e-18
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 6/187 (3%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLSSRE 62
+VTGG+RGIG V GA V C+R + A E G V CD++ E
Sbjct: 13 IVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDVTKEE 72
Query: 63 QREKLI-ETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ LI TV G+++ L+NNA + T + +A++ + + N S F S+ A
Sbjct: 73 DIKTLISVTVERF--GRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLISYFLASKYA 130
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + S G+I+ +SS+ G G + Y A KGA+ +TK LA + ++ +R N ++P
Sbjct: 131 LPHLRKS-QGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRVNCISP 189
Query: 181 WVIKTSM 187
I T +
Sbjct: 190 GNIWTPL 196
|
These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261 |
| >gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 1e-17
Identities = 57/206 (27%), Positives = 84/206 (40%), Gaps = 24/206 (11%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSR----------NQIELDARLHEWKNKGFKVT 52
A VTG GIG LA+ GA V IE R + ++
Sbjct: 11 AFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGR------RAIQIA 64
Query: 53 GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
D++S+ + + G L + +N A IA P ++ E TV N
Sbjct: 65 A---DVTSKADLRAAVARTEAEL-GALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTG 120
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGV---RGIPSVSLYGAYKGAMNQLTKNLACEWA 169
VF Q +G GSIV I+S+ G+ RG+ + Y A K + L+K+LA EW
Sbjct: 121 VFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGL-LQAHYNASKAGVIHLSKSLAMEWV 179
Query: 170 KDNIRTNTVAPWVIKTSMIKPFEVLS 195
IR N+++P T M E++
Sbjct: 180 GRGIRVNSISPGYTATPMNTRPEMVH 205
|
Length = 254 |
| >gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-17
Identities = 54/186 (29%), Positives = 77/186 (41%), Gaps = 14/186 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T LVTG T+GIG A LA G V +R+ I+ F CDL+
Sbjct: 5 TVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----------DFPGELFACDLADI 53
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
EQ + + I ++ ++NN IA +P I + V N + ++Q
Sbjct: 54 EQTAATLAQINEIH--PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFL 111
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
K G IV I S + G + Y A K A+ T+ A E A+ I N VAP
Sbjct: 112 EGMKLREQGRIVNICSR-AIFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPG 170
Query: 182 VIKTSM 187
I+T +
Sbjct: 171 PIETEL 176
|
Length = 234 |
| >gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.1 bits (190), Expect = 2e-17
Identities = 57/192 (29%), Positives = 92/192 (47%), Gaps = 9/192 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
++TG +RGIG AT A G A+ RN+ +A + + +G + D++
Sbjct: 5 MIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQLA 120
+L E V G+L+ L+NNA I + ++ + A ++ + +TN F ++ A
Sbjct: 65 ADVLRLFEAVDREL-GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREA 123
Query: 121 ----HPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRT 175
G G+IV +SS+ G P + Y A KGA++ +T LA E A + IR
Sbjct: 124 VKRMSTRHGGRG-GAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRV 182
Query: 176 NTVAPWVIKTSM 187
N V P VI T +
Sbjct: 183 NAVRPGVIYTEI 194
|
Length = 248 |
| >gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.9 bits (192), Expect = 2e-17
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 4/190 (2%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
L+TG + GIG A E+ AR GA V +R + LDA G CDLS +
Sbjct: 44 LLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDA 103
Query: 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITA--EDMSTVSSTNFESVFHLSQLAH 121
+ L+ V G ++ILINNA + +P + D+ N+ + L +
Sbjct: 104 VDALVADVEKRI-GGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLA 162
Query: 122 PLFKASGNGSIVFISSVGGVRGI-PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P G+G I+ +++ G + P S+Y A K A++ +++ + EW + + T+
Sbjct: 163 PGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYY 222
Query: 181 WVIKTSMIKP 190
++ T MI P
Sbjct: 223 PLVATPMIAP 232
|
Length = 293 |
| >gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Score = 77.0 bits (189), Expect = 3e-17
Identities = 57/188 (30%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A VTGG GIG + + L + G +V C N L + K GF S ++
Sbjct: 6 AYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDW 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + + V + G++++L+NNA I +T ED + V TN S+F++++
Sbjct: 66 DSTKAAFDKVKAEV-GEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVI 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
G G I+ ISSV G +G + Y K ++ T +LA E A + NTV+P
Sbjct: 125 DGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPG 184
Query: 182 VIKTSMIK 189
I T M+K
Sbjct: 185 YIGTDMVK 192
|
Length = 246 |
| >gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 3e-17
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 6/189 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
A++TGG GIG AT E AR GA V ++ L ++ + +GF V G +CD+ RE
Sbjct: 9 AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHRE 68
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+ L + + G ++++ +NA I P V++T +D V + H + P
Sbjct: 69 EVTHLADEAFRLL-GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLP 127
Query: 123 -LFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
L + G +VF +S G+ +P+ L YG K + L + LA E D I + +
Sbjct: 128 RLLEQGTGGHVVFTASFAGL--VPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLC 185
Query: 180 PWVIKTSMI 188
P V++T+++
Sbjct: 186 PMVVETNLV 194
|
Length = 275 |
| >gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 4e-17
Identities = 62/187 (33%), Positives = 84/187 (44%), Gaps = 13/187 (6%)
Query: 2 TALVTG--GTRGIGHATVEELARFGAIV-----HTCSRNQIELDARLHEWKNKGFKVTGS 54
LVT GT GIG AT GA V H R E L G +V
Sbjct: 19 VVLVTAAAGT-GIGSATARRALEEGARVVISDIHE--RRLGETADELAAELGLG-RVEAV 74
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
VCD++S Q + LI+ G+L++L+NNA + P VD+T ++ S V F
Sbjct: 75 VCDVTSEAQVDALIDAAVERL-GRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTF 133
Query: 115 HLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
++ A +A G G IV +SV G R + Y A K + LT+ A E A+ +
Sbjct: 134 RATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGV 193
Query: 174 RTNTVAP 180
R N VAP
Sbjct: 194 RINAVAP 200
|
Length = 262 |
| >gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 4e-17
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 19/188 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T L+TG GIG A GA V+ + + N F DLS
Sbjct: 7 TVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS-----GNFHFLQL----DLS-- 55
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI--AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ E L + V S+ +IL N A I + KP +D + E+ + TN S F L++
Sbjct: 56 DDLEPLFDWVPSV-----DILCNTAGILDDY-KPLLDTSLEEWQHIFDTNLTSTFLLTRA 109
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P +G I+ + S+ + Y A K A+ TK LA ++AKD I+ +A
Sbjct: 110 YLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIA 169
Query: 180 PWVIKTSM 187
P +KT M
Sbjct: 170 PGAVKTPM 177
|
Length = 235 |
| >gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 76.3 bits (188), Expect = 5e-17
Identities = 51/186 (27%), Positives = 73/186 (39%), Gaps = 8/186 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTG GIG A G V + L A + F CDL+
Sbjct: 4 TALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARF--VPVACDLTDA 61
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + G +++L+ NA A D T ++ N E+ + +
Sbjct: 62 ASLAAALANAAAER-GPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVL 120
Query: 122 PLFKASGNGSIVFISSVGGVR--GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
G++V I SV G+ G P+ Y A K + TK LA E+ + IR N VA
Sbjct: 121 EGMLKRSRGAVVNIGSVNGMAALGHPA---YSAAKAGLIHYTKLLAVEYGRFGIRANAVA 177
Query: 180 PWVIKT 185
P +KT
Sbjct: 178 PGTVKT 183
|
Length = 257 |
| >gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 6e-17
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 4/186 (2%)
Query: 3 ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG +RGIG A LA G A+ + + D + E + G + D++
Sbjct: 8 AIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+L + + F G++++L+NNA + + D ED +TN F + + A
Sbjct: 68 AAVTRLFDAAETAF-GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAA 126
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
G I+ +S+ +P Y A K A+ L LA E I N VAP
Sbjct: 127 R--HLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPG 184
Query: 182 VIKTSM 187
+ T +
Sbjct: 185 PVATEL 190
|
Length = 245 |
| >gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 76.2 bits (188), Expect = 6e-17
Identities = 64/200 (32%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
++TGG +G+G A E LA+ GA + NQ +L+ + E G +V G +++ E
Sbjct: 9 VITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEED 68
Query: 64 REKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMS-----TVSSTNFESVF 114
E + F G+LN LINNA I VK MS +V N VF
Sbjct: 69 VEATFAQIAEDF-GQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVF 127
Query: 115 HLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
+ A SG+ G I+ ISS+ G + Y A K + +T A E A+ I
Sbjct: 128 LCGREAAAKMIESGSKGVIINISSIARA-GNMGQTNYSASKAGVAAMTVTWAKELARYGI 186
Query: 174 RTNTVAPWVIKTSM---IKP 190
R +AP VI+T M +KP
Sbjct: 187 RVAAIAPGVIETEMTAAMKP 206
|
Length = 253 |
| >gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 7e-17
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 13/168 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T L+TGG GIG A + G V C RN+ RL E K + ++ VCD++ R
Sbjct: 7 TILITGGASGIGLALAKRFLELGNTVIICGRNE----ERLAEAKAENPEIHTEVCDVADR 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS-----STNFESVFHL 116
+ R +L+E + + LN+LINNA I + D+T + +TN + L
Sbjct: 63 DSRRELVEWLKKEYP-NLNVLINNAGI---QRNEDLTGAEDLLDDAEQEIATNLLAPIRL 118
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNL 164
+ L P +I+ +SS + S +Y A K A++ T L
Sbjct: 119 TALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLAL 166
|
Length = 245 |
| >gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase | Back alignment and domain information |
|---|
Score = 74.9 bits (185), Expect = 1e-16
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 22/191 (11%)
Query: 7 GGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGS---VCDLSSRE 62
I A + A GA +V T A ++ K + D++S E
Sbjct: 3 ADDNSIAWAIAKAAAEEGAEVVLTTWP-----PALRMGAVDELAKELPADVIPLDVTSDE 57
Query: 63 QREKLIETVTSIFQGKLNILINNAA----IAFVKPTVDITAEDMS---TVSSTNFESVFH 115
++L E V GK++ L+++ A I KP +D + E +S+ +F S
Sbjct: 58 DIDELFEKVKEDG-GKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFIS--- 113
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
L++ A PL GSIV +S + R P G K A+ L + LA E + IR
Sbjct: 114 LAKAAKPLMNE--GGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRV 171
Query: 176 NTVAPWVIKTS 186
NT++ KT+
Sbjct: 172 NTISAGPTKTT 182
|
Length = 239 |
| >gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 75.3 bits (185), Expect = 1e-16
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 14/189 (7%)
Query: 3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TG G+G LA+ GA IV E A++ K +T DL +
Sbjct: 11 AIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITA---DLIQQ 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + ++ + G ++ILINNA I + ++ +D V + N ++VF LSQ
Sbjct: 68 KDIDSIVSQAVEVM-GHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVA 126
Query: 122 PLFKASGNG-SIVFISSV----GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
F GNG I+ I+S+ GG+R +PS Y A K A+ LT+ LA E ++ NI N
Sbjct: 127 KQFVKQGNGGKIINIASMLSFQGGIR-VPS---YTASKSAVMGLTRALATELSQYNINVN 182
Query: 177 TVAPWVIKT 185
+AP + T
Sbjct: 183 AIAPGYMAT 191
|
Length = 251 |
| >gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 1e-16
Identities = 52/183 (28%), Positives = 78/183 (42%), Gaps = 14/183 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
ALVT G A+ E L G V H S +N G K LS
Sbjct: 3 IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAERQAFES-ENPGTKA------LS 55
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAED--MSTVSSTNFESVFHLS 117
++ E L++ V G +++L++N I +D T+E + + F L
Sbjct: 56 EQKPEE-LVDAVLQAG-GAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFP-FALL 112
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
Q A K +G GSI+FI+S + + SLYG + A L ++LA E ++DNI
Sbjct: 113 QAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYA 172
Query: 178 VAP 180
+ P
Sbjct: 173 IGP 175
|
Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 2e-16
Identities = 63/195 (32%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG +RGIG A + LA GA+V H +R + E + ++E ++ G +L S
Sbjct: 7 ALVTGASRGIGRAIAKRLANDGALVAIHYGNRKE-EAEETVYEIQSNGGSAFSIGANLES 65
Query: 61 REQREKLIETVTSIFQG-----KLNILINNAAI---AFVKPTVDITAEDMSTVSSTNFES 112
E L ++ + Q K +ILINNA I AF++ T T + + S N ++
Sbjct: 66 LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEET---TEQFFDRMVSVNAKA 122
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
F + Q A + N I+ ISS +P Y KGA+N +T LA +
Sbjct: 123 PFFIIQQALSRLR--DNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARG 180
Query: 173 IRTNTVAPWVIKTSM 187
I N + P IKT M
Sbjct: 181 ITVNAILPGFIKTDM 195
|
Length = 252 |
| >gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Score = 73.8 bits (181), Expect = 3e-16
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 5/192 (2%)
Query: 4 LVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTG +RGIG A LA F VH + + ++ + + +G D++ R
Sbjct: 2 LVTGASRGIGRAIANRLAADGFEICVH-YHSGRSDAESVVSAIQAQGGNARLLQFDVADR 60
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-LA 120
L+E + G ++ NA I ++ ED V TN + +++
Sbjct: 61 VACRTLLEADIAE-HGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCT 119
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P+ +A G I+ ++SV GV G Y A K + TK LA E AK I N +AP
Sbjct: 120 MPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAP 179
Query: 181 WVIKTSMIKPFE 192
+I T M+ E
Sbjct: 180 GLIDTEMLAEVE 191
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239 |
| >gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 5e-16
Identities = 59/193 (30%), Positives = 84/193 (43%), Gaps = 11/193 (5%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
AL+TGG G+G A VE GA V R+ ++ ++ + V G D+ S
Sbjct: 7 ALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFGD---AVVGVEGDVRSLA 63
Query: 63 QREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMST----VSSTNFESVFHLS 117
E+ + F GKL+ I NA I + VDI E + + N + +
Sbjct: 64 DNERAVARCVERF-GKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYILGA 122
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+ A P A+ GS++F S G LY A K A+ L K LA E A +IR N
Sbjct: 123 KAALPALYAT-EGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAP-HIRVNG 180
Query: 178 VAPWVIKTSMIKP 190
VAP + T + P
Sbjct: 181 VAPGGMVTDLRGP 193
|
cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 6e-16
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
+TG +RG G A E G V +R+ L ++ ++ + V D R
Sbjct: 7 FITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTD---RAA 63
Query: 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
+ET F G+L+I++NNA ++T + TNF ++Q P
Sbjct: 64 VFAAVETAVEHF-GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
+ +G I+ ISS+GG+ P +Y A K A+ +++ LA E VA + I
Sbjct: 123 LREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQE----------VAEFGI 172
Query: 184 KTSMIKP 190
K ++++P
Sbjct: 173 KVTLVEP 179
|
Length = 275 |
| >gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 7e-16
Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 7/191 (3%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA---RLHEWKNKGFKVTGSVCDLSS 60
++TG G+G A AR G + N+ + L E GF CD+
Sbjct: 4 MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQR---CDVRD 60
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
Q L + + G +++++NNA +A +++ ED + N V +
Sbjct: 61 YSQLTALAQACEEKWGG-IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAF 119
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
PLFK +G IV I+S+ G+ P++S Y K + L++ L E A D I + V P
Sbjct: 120 LPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCP 179
Query: 181 WVIKTSMIKPF 191
+T+++ F
Sbjct: 180 SFFQTNLLDSF 190
|
Length = 270 |
| >gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.7 bits (179), Expect = 1e-15
Identities = 57/183 (31%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+V+G G+G AR GA V +R LD E + G + D++
Sbjct: 7 VVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+Q L+ F G+++ L+NNA + +KP D V N L+Q
Sbjct: 67 DQCANLVALALERF-GRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAF 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY---KGAMNQLTKNLACEWAKDNIRTNT 177
P SG GSIV I+S+ +R S YGAY KGA+ +++LA E IR N+
Sbjct: 126 TPALAESG-GSIVMINSMV-LR--HSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNS 181
Query: 178 VAP 180
VAP
Sbjct: 182 VAP 184
|
Length = 258 |
| >gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 72.3 bits (177), Expect = 1e-15
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 5/184 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDL-- 58
T LVTG ++G+G + A GA V +R+Q +L+ G ++ DL
Sbjct: 8 TILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMS 67
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLS 117
+ ++ E+ T+ QGKL+ +++ A + + P T + N + L+
Sbjct: 68 AEEKEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLT 127
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK-DNIRTN 176
+ PL K S + S++F+ G +GA K A+N L K A EW + N+R N
Sbjct: 128 RALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFGNLRAN 187
Query: 177 TVAP 180
+ P
Sbjct: 188 VLVP 191
|
Length = 239 |
| >gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Score = 72.5 bits (178), Expect = 2e-15
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 8/189 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGG GIG + V + GA V C + Q +L + + V CD++
Sbjct: 21 ALVTGGATGIGESIVRLFHKHGAKV--CIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVE 78
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHLSQ 118
+ + ++ F G L+I++NNA + P DI ++S N + VF +
Sbjct: 79 DDVSRAVDFTVDKF-GTLDIMVNNAGLTG-PPCPDIRNVELSEFEKVFDVNVKGVFLGMK 136
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A + GSIV + SV G Y K A+ LT+++A E K IR N V
Sbjct: 137 HAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCV 196
Query: 179 APWVIKTSM 187
+P+ + T++
Sbjct: 197 SPYAVPTAL 205
|
Length = 280 |
| >gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.1 bits (175), Expect = 3e-15
Identities = 56/187 (29%), Positives = 83/187 (44%), Gaps = 12/187 (6%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
TAL+TG +RGIG A ELA + R LD E T DL+
Sbjct: 4 PTALITGASRGIGAAIARELAP-THTLLLGGRPAERLDELAAELPG----ATPFPVDLT- 57
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E + V + G+L++L++NA +A + P + T ++ N + L++L
Sbjct: 58 --DPEAIAAAVEQL--GRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLL 113
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P +A+ G +VFI+S G+R P Y A K A+ L L E N+R +V P
Sbjct: 114 LPALRAAH-GHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEP-GNVRVTSVHP 171
Query: 181 WVIKTSM 187
T M
Sbjct: 172 GRTDTDM 178
|
Length = 227 |
| >gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 3e-15
Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 8/185 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG + GIG A + G V +R + GF T D++
Sbjct: 3 VVLITGCSSGIGRALADAFKAAGYEVWATARK----AEDVEALAAAGF--TAVQLDVNDG 56
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+L E + + G L++LINNA + P +D E M TN +V +++
Sbjct: 57 AALARLAEELEAEHGG-LDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALF 115
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL + G +V I SV GV P Y A K A++ L+ L E A ++ V P
Sbjct: 116 PLLR-RSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPG 174
Query: 182 VIKTS 186
I +
Sbjct: 175 AIASQ 179
|
Length = 274 |
| >gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 8e-15
Identities = 58/181 (32%), Positives = 80/181 (44%), Gaps = 6/181 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR--LHEWKNKGFKVTGSVCDLSS 60
AL+TG GIG AT AR GA + + E DA + + +G K DL
Sbjct: 58 ALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD 117
Query: 61 REQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+L+E G L+IL+N A VK DIT E TN ++F L +
Sbjct: 118 EAFCRQLVERAVKELGG-LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKA 176
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P SI+ S+ + P++ Y + K A+ TK LA + A+ IR N VA
Sbjct: 177 AIPHLPPGA--SIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVA 234
Query: 180 P 180
P
Sbjct: 235 P 235
|
Length = 300 |
| >gnl|CDD|181198 PRK08017, PRK08017, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 8e-15
Identities = 57/184 (30%), Positives = 80/184 (43%), Gaps = 6/184 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ L+TG + GIG EL R G V R ++ AR++ GF TG + DL
Sbjct: 4 SVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDV-ARMNS---LGF--TGILLDLDDP 57
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E E+ + V ++ +L L NNA P I+ + M STNF L+ L
Sbjct: 58 ESVERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLL 117
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P G G IV SSV G+ P Y A K A+ + L E I+ + + P
Sbjct: 118 PAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPG 177
Query: 182 VIKT 185
I+T
Sbjct: 178 PIRT 181
|
Length = 256 |
| >gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 69.7 bits (171), Expect = 1e-14
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 14/194 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
T LVTGG+RG+G A AR GA +V +++ +A E ++ + V D
Sbjct: 7 TVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTD--- 63
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFV------KPTVDITAEDMSTVSSTNFESVF 114
REQ + + T T F + ++NNA F K DIT ED + +
Sbjct: 64 REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDN 172
+ Q A P + G G I+ I + + P V Y K A+ LT+NLA E
Sbjct: 124 NTIQAALPGMREQGFGRIINIGT--NLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYG 181
Query: 173 IRTNTVAPWVIKTS 186
I N V+ +++T+
Sbjct: 182 ITVNMVSGGLLRTT 195
|
Length = 253 |
| >gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 69.3 bits (170), Expect = 2e-14
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
++TGG+ G+G A + A GA V R + +L+ E + +V D+ +
Sbjct: 3 VVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNP 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E +K++E + F G+++ LINNAA F+ P D++ ++V F+ SQ
Sbjct: 63 EDVQKMVEQIDEKF-GRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVG 121
Query: 122 PLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD-NIRTNTVA 179
+ G G+I+ + + P V A K + +T+ LA EW + IR N +A
Sbjct: 122 KYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIA 181
Query: 180 P 180
P
Sbjct: 182 P 182
|
Length = 252 |
| >gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 68.7 bits (169), Expect = 2e-14
Identities = 57/191 (29%), Positives = 88/191 (46%), Gaps = 11/191 (5%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLS--S 60
LVTG GIG AR GA V R + +L+A E + G + DL +
Sbjct: 16 LVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTAT 75
Query: 61 REQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ ++L +T+ F G+L+ +++NA + + P E V N + F L+Q
Sbjct: 76 PQNYQQLADTIEEQF-GRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQA 134
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY---KGAMNQLTKNLACEWAKDNIRTN 176
PL S S+VF SS G +G + +GAY K A + + LA E+ N+R N
Sbjct: 135 LLPLLLKSPAASLVFTSSSVGRQG---RANWGAYAVSKFATEGMMQVLADEYQGTNLRVN 191
Query: 177 TVAPWVIKTSM 187
+ P +T+M
Sbjct: 192 CINPGGTRTAM 202
|
Length = 247 |
| >gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 67.6 bits (166), Expect = 3e-14
Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 25/187 (13%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
+V G T IG A + L+ G V T R+ + D++
Sbjct: 1 IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSGDY-----------------QVDITDEA 43
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+ L E V G + +++ A A P ++T D ++ +L + P
Sbjct: 44 SIKALFEKV-----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLLGQINLVRHGLP 98
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182
+ GSI S + R IP + GA+ + A E + IR N V+P V
Sbjct: 99 Y--LNDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRG-IRINAVSPGV 155
Query: 183 IKTSMIK 189
++ S+
Sbjct: 156 VEESLEA 162
|
Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198 |
| >gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.7 bits (168), Expect = 3e-14
Identities = 55/190 (28%), Positives = 88/190 (46%), Gaps = 7/190 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
L+TG +RGIG AT A G ++ +R+ + + G + D+++
Sbjct: 4 VVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVAN 63
Query: 61 REQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLS-Q 118
+ + V S F G+L+ L+NNA I A P D+ A + + TN + + +
Sbjct: 64 EADVIAMFDAVQSAF-GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCARE 122
Query: 119 LAHPLFKASGN--GSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRT 175
A L G G+IV +SS+ G P+ + Y KGA++ LT LA E +R
Sbjct: 123 AARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRV 182
Query: 176 NTVAPWVIKT 185
N V P +I+T
Sbjct: 183 NAVRPGLIET 192
|
Length = 248 |
| >gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 3e-14
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 1/187 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TA+VTGG GIG AT A GA V N+ + + + KG CD++ R
Sbjct: 5 TAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + + G +++L+NNA P + + N H+
Sbjct: 65 DSVDTAVAAAEQAL-GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVL 123
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P G G IV I+S G ++Y A KG + +K +A E A+ I N V P
Sbjct: 124 PGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPG 183
Query: 182 VIKTSMI 188
T+++
Sbjct: 184 PTDTALL 190
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250 |
| >gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 68.4 bits (168), Expect = 5e-14
Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 15/189 (7%)
Query: 5 VTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFK-VTGSVCDLSSRE 62
+TGG RGIG AT LA GA V I +LD L + V G D++
Sbjct: 10 ITGGARGIGLATARALAALGARV------AIGDLDEALAKETAAELGLVVGGPLDVTDPA 63
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHLSQL 119
++ V + G +++L+NNA + V P +D E + N V S+L
Sbjct: 64 SFAAFLDAVEADL-GPIDVLVNNAGVMPVGPFLD---EPDAVTRRILDVNVYGVILGSKL 119
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P G G +V ++S+ G +P ++ Y A K A+ T E + + V
Sbjct: 120 AAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVL 179
Query: 180 PWVIKTSMI 188
P + T +I
Sbjct: 180 PSFVNTELI 188
|
Length = 273 |
| >gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 6e-14
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 19/196 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV--CDLS 59
A++TGG GIG AT LA GA V + D K +V G D++
Sbjct: 9 VAVITGGGSGIGLATARRLAAEGATV-------VVGDIDPEAGKAAADEVGGLFVPTDVT 61
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST-----VSSTNFESVF 114
+ L +T + G ++I NNA I+ P D + + V N SV+
Sbjct: 62 DEDAVNALFDTAAETY-GSVDIAFNNAGIS---PPEDDSILNTGLDAWQRVQDVNLTSVY 117
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNI 173
+ A P G GSI+ +S V G + + Y A KG + +++ L ++A+ I
Sbjct: 118 LCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGI 177
Query: 174 RTNTVAPWVIKTSMIK 189
R N + P + T +++
Sbjct: 178 RVNALCPGPVNTPLLQ 193
|
Length = 255 |
| >gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 7e-14
Identities = 61/192 (31%), Positives = 90/192 (46%), Gaps = 16/192 (8%)
Query: 3 ALVTGGTR--GIGHATVEELARFGA-IVHTCSRNQ-------IELDARLH---EWKNKGF 49
A+VTG +R GIG A +ELA GA I T ++ D ++ E G
Sbjct: 9 AVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGV 68
Query: 50 KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
KV+ DL+ + ++L+ VT G +IL+NNAA + ++TAE++ N
Sbjct: 69 KVSSMELDLTQNDAPKELLNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVN 127
Query: 110 FESVFHLS-QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
+ LS Q A K SG G I+ ++S + Y A KGA++ LT +LA E
Sbjct: 128 VRATTLLSSQFARGFDKKSG-GRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAAEV 186
Query: 169 AKDNIRTNTVAP 180
A I N + P
Sbjct: 187 AHLGITVNAINP 198
|
Length = 256 |
| >gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 1e-13
Identities = 55/184 (29%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
L+TG ++GIG A E A G +H +R+ L+A + + G V DLSS
Sbjct: 9 RVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSS 68
Query: 61 REQREKLIETVTSIFQGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVF---HL 116
E RE+L I +IL+NNA AI P + D + + VF L
Sbjct: 69 PEAREQLAAEAGDI-----DILVNNAGAI----PGGGLDDVDDAAWRAGWELKVFGYIDL 119
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
++LA+P KA G+G IV + G A A+ T+ L + D +R
Sbjct: 120 TRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVV 179
Query: 177 TVAP 180
V P
Sbjct: 180 GVNP 183
|
Length = 259 |
| >gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 1e-13
Identities = 54/194 (27%), Positives = 79/194 (40%), Gaps = 14/194 (7%)
Query: 2 TALVTGGTRGIGHATVEE-LARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
LVTG RGIG A VE+ LAR A V+ +R+ + +V D++
Sbjct: 8 VVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGP-------RVVPLQLDVTD 60
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAED-MSTVSSTNFESVFHLSQL 119
E + + IL+NNA I + ED + TN+ +++
Sbjct: 61 PASVAAAAEAASDV-----TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARA 115
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P+ A+G G+IV + SV P++ Y A K A LT+ L E A R V
Sbjct: 116 FAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVH 175
Query: 180 PWVIKTSMIKPFEV 193
P I T M +
Sbjct: 176 PGPIDTDMAAGLDA 189
|
Length = 238 |
| >gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-13
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 17/197 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDAR--LHEWKNKGFKVTGSVCD 57
A+VTG G+G A LAR GA V N + LDA L E + G K D
Sbjct: 14 VAVVTGAAAGLGRAEALGLARLGATVVV---NDVASALDASDVLDEIRAAGAKAVAVAGD 70
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
+S R ++L+ T + G L+I++NNA I + +++ E+ V + + F L+
Sbjct: 71 ISQRATADELVATAVGL--GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLT 128
Query: 118 QLAHPLF----KASGN---GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
+ A + KA+G G IV SS G+ G + YGA K + LT + A +
Sbjct: 129 RNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGR 188
Query: 171 DNIRTNTVAPWVIKTSM 187
+R N + P +T+M
Sbjct: 189 YGVRANAICPRA-RTAM 204
|
Length = 306 |
| >gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 2e-13
Identities = 51/191 (26%), Positives = 75/191 (39%), Gaps = 8/191 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSR 61
A+VTGG GIG + G V + E A E + F V G V D +
Sbjct: 4 AIVTGGGHGIGKQICLDFLEAGDKV-VFADIDEERGADFAEAEGPNLFFVHGDVADETLV 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
K + G++++L+NNAA + E+ + S N + LS+
Sbjct: 63 ----KFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEEWDRILSVNLTGPYELSRYCR 118
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
G I+ I+S + P Y A KG + LT LA D IR N ++P
Sbjct: 119 DELIK-NKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCISPG 176
Query: 182 VIKTSMIKPFE 192
I T+ + F
Sbjct: 177 WINTTEQQEFT 187
|
This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242 |
| >gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 66.3 bits (162), Expect = 2e-13
Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG + GIG + L RL +K FKV ++ DL +
Sbjct: 2 VVLITGCSSGIG---------------------LHLAVRLASDPSKRFKVYATMRDLKKK 40
Query: 62 EQ-----REKLIETVT-----------------SIFQGKLNILINNAAIAFVKPTVDITA 99
+ T+ + + +++L+ NA + + P ++
Sbjct: 41 GRLWEAAGALAGGTLETLQLDVCDSKSVAAAVERVTERHVDVLVCNAGVGLLGPLEALSE 100
Query: 100 EDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
+ M++V N + Q P K G+G I+ SSVGG++G+P +Y A K A+
Sbjct: 101 DAMASVFDVNVFGTVRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEG 160
Query: 160 LTKNLACEWAKDNIRTNTVAP 180
L ++LA + N+ + +
Sbjct: 161 LCESLAVQLLPFNVHLSLIEC 181
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258 |
| >gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 4e-13
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV---HTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
LV GG+RGIG A V GA V + S++ E A+ TG+
Sbjct: 8 KVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQ----------ETGATAVQ 57
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+ R+ +I+ V G L+IL+ NA IA +++ A+D+ + N + +H S
Sbjct: 58 TDSADRDAVIDVVRK--SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASV 115
Query: 119 LAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
A + G I+ I SV G R + ++ Y A K A+ + + LA ++ I N
Sbjct: 116 EAAR--QMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINV 173
Query: 178 VAPWVIKTSM 187
V P I T
Sbjct: 174 VQPGPIDTDA 183
|
Length = 237 |
| >gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 5e-13
Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLS 59
T L+TG IG A V+ + G IV ++ L+ L K K++ D++
Sbjct: 6 TILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDIT 65
Query: 60 SREQREKLIETVTSIFQGKLNILINNA---AIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
+E E+ + + GK++ +N A + K D++ +D + S + S F
Sbjct: 66 DQESLEEFLSKSAEKY-GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLF 124
Query: 117 SQLAHPLFKASGNGSIVFISSVGGV--------RGIPSVSL--YGAYKGAMNQLTKNLAC 166
SQ FK G G++V ISS+ GV G S Y A K + LTK LA
Sbjct: 125 SQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAK 184
Query: 167 EWAKDNIRTNTVAP 180
+ NIR N V+P
Sbjct: 185 YFKDSNIRVNCVSP 198
|
Length = 256 |
| >gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 6e-13
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 9/192 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
++TG ++G+G A +L G V + SR + + +L E N T DL
Sbjct: 4 VIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNL--TFHSLDLQDVH 61
Query: 63 QREKLIETV-TSIFQGKLN--ILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+ E + +SI + ++ LINNA + A +KP +E++ T N + L+
Sbjct: 62 ELETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTS 121
Query: 119 LAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
K + ++ ISS S Y + K ++ T+ +A E ++
Sbjct: 122 TFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKI 181
Query: 178 VA--PWVIKTSM 187
VA P V+ T+M
Sbjct: 182 VAFSPGVMDTNM 193
|
Length = 251 |
| >gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Score = 64.8 bits (158), Expect = 7e-13
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 21/198 (10%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW-KNKGFKVTGSVCDLSSR 61
LVTGG G+G A V+ GA V ++ A L E G V G D+ S
Sbjct: 8 VLVTGGASGLGRAIVDRFVAEGARVAVLDKSA----AGLQELEAAHGDAVVGVEGDVRSL 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLS--- 117
+ ++ + + F GK++ LI NA I + VDI + + F+ VFH++
Sbjct: 64 DDHKEAVARCVAAF-GKIDCLIPNAGIWDYSTALVDIPDDRIDEA----FDEVFHINVKG 118
Query: 118 -----QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
+ A P AS GS++F S G LY A K A+ L K LA E A
Sbjct: 119 YLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAP-Y 176
Query: 173 IRTNTVAPWVIKTSMIKP 190
+R N VAP + + + P
Sbjct: 177 VRVNGVAPGGMSSDLRGP 194
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262 |
| >gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 65.6 bits (161), Expect = 8e-13
Identities = 61/200 (30%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-----ARLHEWKNKGFKVTGS-- 54
ALVTG RGIG A E LAR GA V + LD L N +V G+
Sbjct: 212 VALVTGAARGIGAAIAEVLARDGAHV-------VCLDVPAAGEALAAVAN---RVGGTAL 261
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS-----TVSSTN 109
D+++ + ++ E + G L+I+++NA I T D T +M +V + N
Sbjct: 262 ALDITAPDAPARIAEHLAERH-GGLDIVVHNAGI-----TRDKTLANMDEARWDSVLAVN 315
Query: 110 FESVFHLSQ--LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
+ +++ LA G IV +SS+ G+ G + Y A K + L + LA
Sbjct: 316 LLAPLRITEALLAAGALGD--GGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPL 373
Query: 168 WAKDNIRTNTVAPWVIKTSM 187
A+ I N VAP I+T M
Sbjct: 374 LAERGITINAVAPGFIETQM 393
|
Length = 450 |
| >gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 1e-12
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 7/184 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG + GIG AT LA G V+ +R +++ ++ + + G D++
Sbjct: 5 VALVTGASSGIGKATARRLAAQGYTVYGAAR-RVD---KMEDLASLGVHPLS--LDVTDE 58
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ ++T+ + +G++++L+NNA D+ ++ N L+QL
Sbjct: 59 ASIKAAVDTIIAE-EGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVL 117
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P +A +G I+ ISS+GG P + Y A K A+ + L E A I + P
Sbjct: 118 PHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPG 177
Query: 182 VIKT 185
IKT
Sbjct: 178 GIKT 181
|
Length = 273 |
| >gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 2e-12
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 5/199 (2%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC-DLS 59
VTG GIG AT LA GA + R+ L + + + G V D+S
Sbjct: 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQ 118
+ + + G +++++N A I+ TVD +T E + N H+ +
Sbjct: 61 DYDAVAAFAADIHAAH-GSMDVVMNIAGIS-AWGTVDRLTHEQWRRMVDVNLMGPIHVIE 118
Query: 119 -LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
P+ A G +V +SS G+ +P + Y A K + L++ L + A+ I +
Sbjct: 119 TFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSV 178
Query: 178 VAPWVIKTSMIKPFEVLSV 196
V P +KT ++ E+ V
Sbjct: 179 VVPGAVKTPLVNTVEIAGV 197
|
Length = 272 |
| >gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.7 bits (153), Expect = 4e-12
Identities = 48/182 (26%), Positives = 72/182 (39%), Gaps = 12/182 (6%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
LV GG+ GIG A A GA V SR++ L A V + D++
Sbjct: 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGA-PVRTAALDITDEAA 59
Query: 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
+ G + ++ AA P + + F + +++ A
Sbjct: 60 VDAFFAEA-----GPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAAR-- 112
Query: 124 FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183
A G GS+ F+S VR S L GA A+ L + LA E A +R NTV+P ++
Sbjct: 113 -IAPG-GSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLV 168
Query: 184 KT 185
T
Sbjct: 169 DT 170
|
Length = 230 |
| >gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 5e-12
Identities = 60/191 (31%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR-----LHEWKNKGFKVTGSVCD 57
ALVTGG GIG A AR GA V E DA+ + E K + G D
Sbjct: 52 ALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPG---D 108
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHL 116
LS + L+ G L+I+ A P + D+T+E + N ++F L
Sbjct: 109 LSDEKFARSLVHEAHKAL-GGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWL 167
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+Q A PL SI+ SS+ + P + Y A K A+ ++ LA + A+ IR N
Sbjct: 168 TQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225
Query: 177 TVAPWVIKTSM 187
VAP I T++
Sbjct: 226 IVAPGPIWTAL 236
|
Length = 294 |
| >gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 62.4 bits (152), Expect = 1e-11
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 2/182 (1%)
Query: 5 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64
+TG + GIG AT E AR GA + +R++ L A E + G +V D++ +Q
Sbjct: 12 ITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQV 71
Query: 65 EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124
+ L S F G++++ +NN + V + E V TN + A P+F
Sbjct: 72 KALATQAAS-FGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIF 130
Query: 125 KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD-NIRTNTVAPWVI 183
K G+G + + S+GG P + Y A K + ++ L E A +I V P +
Sbjct: 131 KKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFM 190
Query: 184 KT 185
T
Sbjct: 191 DT 192
|
Length = 330 |
| >gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR) | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 1e-11
Identities = 51/204 (25%), Positives = 73/204 (35%), Gaps = 50/204 (24%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
LVTGG+ GIG A LA G+ KV
Sbjct: 1 VLVTGGSGGIGGAIARWLASRGS-----------------------PKVL---------- 27
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
V S + +++++NAAI +D+T + N L + A
Sbjct: 28 --------VVS----RRDVVVHNAAILDDGRLIDLTGSRIERAIRANVVGTRRLLEAARE 75
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP-W 181
L KA G + ISSV G+ G P + Y A K A++ L + A E + + VA
Sbjct: 76 LMKAKRLGRFILISSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGT 135
Query: 182 VIKTSMIK----PFEVLSVGIKGR 201
+ M K P E+L G
Sbjct: 136 WAGSGMAKGPVAPEEILGNRRHGV 159
|
SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186 |
| >gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 1e-11
Identities = 46/186 (24%), Positives = 73/186 (39%), Gaps = 12/186 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
A+V GG + +G LA G A+ S + ++ +G G D
Sbjct: 4 VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEG-MAYGFGADA 62
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF---- 114
+S + L V IF G++++L+ NA IA D D N F
Sbjct: 63 TSEQSVLALSRGVDEIF-GRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAR 121
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
S+L + + G I+ I+S G G S Y A K LT++LA + A+ I
Sbjct: 122 EFSRL---MIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGIT 178
Query: 175 TNTVAP 180
+++
Sbjct: 179 VHSLML 184
|
Length = 259 |
| >gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 2e-11
Identities = 48/198 (24%), Positives = 87/198 (43%), Gaps = 28/198 (14%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRN---QIELDARLHEWKNKGFKVTGSV--- 55
A+VTG + G G T ELA+ G +V RN Q L ++ + + ++
Sbjct: 5 IAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQ-----LNLQQNIKVQ 59
Query: 56 -CDLSSREQREKLIETVTSIFQ--GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
D++ + I + + G++++L+NNA A +I E+ TN
Sbjct: 60 QLDVTDQNS----IHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFG 115
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
++Q P + +G I+ ISS+ G G P +S Y + K A+ +++L E
Sbjct: 116 AISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLE----- 170
Query: 173 IRTNTVAPWVIKTSMIKP 190
+ P+ I ++I+P
Sbjct: 171 -----LKPFGIDVALIEP 183
|
Length = 280 |
| >gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 2e-11
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
T +++GGTRGIG A V E A+ G I T + N E + + + K G K ++
Sbjct: 10 TLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNIL 69
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAI---AFV---KPTVDITAEDMSTVSSTNFESV 113
E ++L + + F +++ I+NA I A V + + + ++ + + +
Sbjct: 70 EPETYKELFKKIDEDFD-RVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAF 128
Query: 114 FHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
+Q A + G GSI+ +SS G + I + + +G K A+ + K A E + NI
Sbjct: 129 VVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGEKNI 188
Query: 174 RTNTVAPWVIKTSMIKPF 191
R N V+ I T +K F
Sbjct: 189 RVNAVSGGPIDTDALKAF 206
|
Length = 260 |
| >gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Score = 60.5 bits (147), Expect = 3e-11
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 15/138 (10%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE---- 111
CD+ Q E+ ET+ + GKL+IL++ +AF ++ D S S F
Sbjct: 66 CDVQDDAQIEETFETIKQKW-GKLDILVH--CLAFAGKE-ELIG-DFSATSREGFARALE 120
Query: 112 -SVFHLSQLAH---PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
S + L+ L PL S GSIV ++ +GGVR IP+ ++ G K A+ + LA E
Sbjct: 121 ISAYSLAPLCKAAKPLM--SEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAE 178
Query: 168 WAKDNIRTNTVAPWVIKT 185
NIR N ++ I+T
Sbjct: 179 LGPKNIRVNAISAGPIRT 196
|
Length = 258 |
| >gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases | Back alignment and domain information |
|---|
Score = 59.0 bits (144), Expect = 4e-11
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 19/160 (11%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVC 56
T L+TGG G+G A LA GA +V SR+ A L E + G +VT C
Sbjct: 2 TYLITGGLGGLGRALARWLAERGARRLVLL-SRSGPDAPGAAALLAELEAAGARVTVVAC 60
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
D++ R+ ++ + ++ G L +I+ A + +T E + V + ++L
Sbjct: 61 DVADRDALAAVLAAIPAVE-GPLTGVIHAAGVLDDGVLASLTPERFAAVLAPKAAGAWNL 119
Query: 117 SQLAHPL----FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
+L L F V SS+ GV G P + Y A
Sbjct: 120 HELTADLPLDFF--------VLFSSIAGVLGSPGQANYAA 151
|
It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180 |
| >gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 5e-11
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 7/169 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TG G G A A G + Q LD + E + +G +V G D+S
Sbjct: 8 VAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
Q E L + F G +++L NNA + + + D V N V H +
Sbjct: 68 AQVEALADAALERF-GAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFT 126
Query: 122 PLFKASG------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNL 164
PL A+ G IV +S+ G+ P++ +Y K A+ LT+ L
Sbjct: 127 PLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETL 175
|
Length = 287 |
| >gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 9e-11
Identities = 51/219 (23%), Positives = 75/219 (34%), Gaps = 53/219 (24%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T ++TG GIG AT E L G V I +D R + DLS+
Sbjct: 1 TIVITGAASGIGAATAELLEDAGHTV-------IGIDLREADVI----------ADLSTP 43
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E R I V + G L+ L+N A + V N+ + L +
Sbjct: 44 EGRAAAIADVLARCSGVLDGLVNCAGVGGTTVAGL--------VLKVNYFGLRALMEALL 95
Query: 122 PLFKASGNGSIVFISSVGGV---------------------------RGIPSVSLYGAYK 154
P + + V +SS+ G G P Y K
Sbjct: 96 PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSK 155
Query: 155 GAMNQLTKNLACEWAKD-NIRTNTVAPWVIKTSMIKPFE 192
A+ T+ A W +R NTVAP ++T +++ F
Sbjct: 156 EALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFL 194
|
Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 58.0 bits (141), Expect = 2e-10
Identities = 53/206 (25%), Positives = 74/206 (35%), Gaps = 41/206 (19%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
L+ G T I A A GA ++ +R+ L+ RL + DL +
Sbjct: 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLE-RLAD-------------DLRA 47
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFV---KPTVDIT----------------AED 101
R +L+IL + AF+ DI
Sbjct: 48 RGAVAVST--------HELDILDTASHAAFLDSLPALPDIVLIAVGTLGDQAACEADPAL 99
Query: 102 MSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
TNFE L L F+A G+G+IV ISSV G RG S +YG+ K A+
Sbjct: 100 ALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFL 159
Query: 162 KNLACEWAKDNIRTNTVAPWVIKTSM 187
L K + TV P ++T M
Sbjct: 160 SGLRNRLFKSGVHVLTVKPGFVRTPM 185
|
Length = 243 |
| >gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 3e-10
Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 25/199 (12%)
Query: 2 TALVTG--GTRGIGHATVEELARFGA-IVHTC----SRNQIELDARLHEWKNKGFKVTGS 54
L+TG R I + L GA + T R ++E +L E + V
Sbjct: 3 RILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVE---KLAERLGESALV--L 57
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAF------VKPTVDITAEDMSTVSST 108
CD+S+ E+ ++L V + GKL+ L++ +IAF P +D + +
Sbjct: 58 PCDVSNDEEIKELFAEVKKDW-GKLDGLVH--SIAFAPKVQLKGPFLDTSRKGFLKALDI 114
Query: 109 NFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
S + L LA G SIV +S +G R +P ++ G K A+ + LA E
Sbjct: 115 ---SAYSLVSLAKAALPIMNPGGSIVTLSYLGSERVVPGYNVMGVAKAALESSVRYLAYE 171
Query: 168 WAKDNIRTNTVAPWVIKTS 186
+ IR N ++ IKT
Sbjct: 172 LGRKGIRVNAISAGPIKTL 190
|
This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250 |
| >gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 58.5 bits (142), Expect = 3e-10
Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 6/190 (3%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
+VTG GIG T AR GA V ++ + + G D+S +
Sbjct: 318 VVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDAD 377
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL-AH 121
E E V + G +I++NNA I +D +AED V N V H +L
Sbjct: 378 AMEAFAEWVRAE-HGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGR 436
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSL--YGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
+ + G IV ++S PS SL Y K A+ L++ L E A I +
Sbjct: 437 QMVERGTGGHIVNVASAAAY--APSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAIC 494
Query: 180 PWVIKTSMIK 189
P + T+++
Sbjct: 495 PGFVDTNIVA 504
|
Length = 582 |
| >gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 57.2 bits (139), Expect = 3e-10
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 19/196 (9%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGS-VCDL 58
+ +TG + GIG A E AR GA + +R L A V + V D
Sbjct: 3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDA 62
Query: 59 SSREQREKLIETVTSIF---QGKLNILINNAAIAFVKPTVDITAED---MSTVSSTNFES 112
+ + + F G +++I NA I+ T+ ED V TN+
Sbjct: 63 DA-------LAAAAADFIAAHGLPDVVIANAGIS--VGTLTEEREDLAVFREVMDTNYFG 113
Query: 113 VFHLSQ-LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
+ Q P+ +A+ G++V I+SV GVRG+P Y A K A + ++L E
Sbjct: 114 MVATFQPFIAPM-RAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPA 172
Query: 172 NIRTNTVAPWVIKTSM 187
+R T+AP I+T M
Sbjct: 173 GVRVVTIAPGYIRTPM 188
|
Length = 257 |
| >gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 4e-10
Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 11/155 (7%)
Query: 4 LVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-----CD 57
LVTGG GIG A LAR +GA + R+ + + + G+ D
Sbjct: 209 LVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLYISAD 268
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
++ +L+E V + G ++ +I+ A + TAED V + + + +L+
Sbjct: 269 VTDAAAVRRLLEKVRERY-GAIDGVIHAAGVLRDALLAQKTAEDFEAVLAPKVDGLLNLA 327
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152
Q V SSV G + Y A
Sbjct: 328 Q----ALADEPLDFFVLFSSVSAFFGGAGQADYAA 358
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436 |
| >gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 7e-10
Identities = 46/187 (24%), Positives = 73/187 (39%), Gaps = 16/187 (8%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
LV GG +G A V+ G V S + E +E + V S S EQ
Sbjct: 5 LVYGGRGALGSAVVQAFKSRGWWV--ASIDLAE-----NEEADASIIVLDSD---SFTEQ 54
Query: 64 REKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
++++ +V + GK++ LI A A ++ + N + F S LA
Sbjct: 55 AKQVVASVARLS-GKVDALICVAGGWAGGSAKSKSFVKNWDLMWKQNLWTSFIASHLATK 113
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW--AKDNIRTNTVAP 180
G +V + + P + YGA K A++QLT++LA E N + P
Sbjct: 114 HLL--SGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTANAILP 171
Query: 181 WVIKTSM 187
+ T
Sbjct: 172 VTLDTPA 178
|
Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221 |
| >gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 8e-10
Identities = 44/192 (22%), Positives = 82/192 (42%), Gaps = 11/192 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ G + G+G+A + GA V SRN+ +L R+ + +K + V D+SS
Sbjct: 7 KVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKL-KRMKKTLSKYGNIHYVVGDVSST 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E +IE + +++ +V+ TV+ + + + + + + + +
Sbjct: 66 ESARNVIEKAAKVLNAIDGLVV--TVGGYVEDTVEEFSG-LEEMLTNHIKIPLYAVNASL 122
Query: 122 PLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
K SIV +SS+ G+ + P Y K + + + LA E IR N +AP
Sbjct: 123 RFLKEG--SSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAP 180
Query: 181 WVIKTSMIKPFE 192
T++ FE
Sbjct: 181 ----TTISGDFE 188
|
Length = 238 |
| >gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 56.4 bits (136), Expect = 9e-10
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 5/181 (2%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
M LVT +RGIG EL + GA V SRN+ L+ L E K G +V DLS
Sbjct: 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSD 59
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV---FHLS 117
++ + L++ + G ++ L+ NA +P + A + + V + +
Sbjct: 60 KDDLKNLVKEAWELL-GGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTT 118
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
L + G +V++SSV +P + L + + QL K ++ + IR T
Sbjct: 119 LLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYT 178
Query: 178 V 178
V
Sbjct: 179 V 179
|
Length = 259 |
| >gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 1e-09
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAF------VKPTVDITAEDMSTVSSTN 109
CD+++ E + L T+ + GKL+ L++ +IAF +D + E +
Sbjct: 63 CDVTNDESIDALFATIKKKW-GKLDGLVH--SIAFAPKEELKGDYLDTSREGFLIAMDIS 119
Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
S L++ A PL GSI+ ++ +G R +P+ ++ G K A+ + LA +
Sbjct: 120 AYSFTALAKAARPLMN--NGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLG 177
Query: 170 KDNIRTNTVAPWVIKT 185
K+ IR N ++ I+T
Sbjct: 178 KEGIRVNAISAGPIRT 193
|
Length = 259 |
| >gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 1e-09
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 18/193 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TAL+ G +RG+G V+ L G V R + D L V D++
Sbjct: 3 TALIIGASRGLGLGLVDRLLERGWQVTATVRGP-QQDTALQALPG----VHIEKLDMNDP 57
Query: 62 EQREKLIETVTSIFQGK-LNILINNAAIA--FVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
++L++ + QG+ ++L NA I+ + D TA ++ + TN + L++
Sbjct: 58 ASLDQLLQRL----QGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLAR 113
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIP---SVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+ G G + F+SS G +P + LY A K A+N +T++ E + +
Sbjct: 114 RLLGQVRP-GQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTV 172
Query: 176 NTVAP-WVIKTSM 187
++ P WV KT M
Sbjct: 173 LSMHPGWV-KTDM 184
|
Length = 225 |
| >gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 55.6 bits (134), Expect = 1e-09
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 3/187 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSSR 61
A T ++GIG LAR GA V SRN+ L AR V+ V DL+ R
Sbjct: 11 AFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKR 70
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E E+ ++ + +I G+ +I + ++++ ED +L++
Sbjct: 71 EDLERTVKELKNI--GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALV 128
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + G G I++ +SV IP+++L + +M L + LA E I N + P
Sbjct: 129 PAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPG 188
Query: 182 VIKTSMI 188
+I+T +
Sbjct: 189 IIRTDRV 195
|
Length = 263 |
| >gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 55.0 bits (133), Expect = 3e-09
Identities = 47/198 (23%), Positives = 76/198 (38%), Gaps = 32/198 (16%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC------- 56
L+TG G G+ ++L G V + G K VC
Sbjct: 4 LITGCDSGFGNLLAKKLDSLGFTVLAGCLTKNG----------PGAKELRRVCSDRLRTL 53
Query: 57 --DLSSREQREKLIETVTSIFQGK-LNILINNAAI-AFVKPTVDITAEDMSTVSSTNFES 112
D++ EQ ++ + V K L L+NNA I F + +D N
Sbjct: 54 QLDVTKPEQIKRAAQWVKEHVGEKGLWGLVNNAGILGFGGDEELLPMDDYRKCMEVNLFG 113
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
+++ PL + + G +V +SS+GG P+ Y A K A+ + +L E
Sbjct: 114 TVEVTKAFLPLLRRA-KGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRE----- 167
Query: 173 IRTNTVAPWVIKTSMIKP 190
+ PW +K S+I+P
Sbjct: 168 -----LQPWGVKVSIIEP 180
|
17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281 |
| >gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.8 bits (132), Expect = 3e-09
Identities = 48/183 (26%), Positives = 74/183 (40%), Gaps = 9/183 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFG---AIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDL 58
A+V GG + +G LA G A+ S N + D E+ G K G D
Sbjct: 5 AVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEY---GEKAYGFGADA 61
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
++ + L + V IF ++++L+ +A IA D D N F ++
Sbjct: 62 TNEQSVIALSKGVDEIF-KRVDLLVYSAGIAKSAKITDFELGDFDRSLQVNLVGYFLCAR 120
Query: 119 LAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
L G G I+ I+S G G S Y A K LT++LA + A+ I N+
Sbjct: 121 EFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVNS 180
Query: 178 VAP 180
+
Sbjct: 181 LML 183
|
Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257 |
| >gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 3e-09
Identities = 48/179 (26%), Positives = 72/179 (40%), Gaps = 7/179 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T L+TG G G LAR G V + ++ A E +G + DL+
Sbjct: 4 TILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
R + + +++L+NNA I VDI E + + TN L+Q
Sbjct: 64 IDRAQ-------AAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFV 116
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A G G +VF SS+ G+ P Y A K A+ + + + E I+ TV P
Sbjct: 117 RKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNP 175
|
Length = 257 |
| >gnl|CDD|180796 PRK07023, PRK07023, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 4e-09
Identities = 49/198 (24%), Positives = 82/198 (41%), Gaps = 24/198 (12%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLS 59
+ A+VTG +RG+G A E+L + G V +R++ L A E ++ DLS
Sbjct: 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGE------RLAEVELDLS 55
Query: 60 SREQREKLIETVTSIFQGKLN-----ILINNAAIAFVKPTVDITAEDMSTVS---STNFE 111
+ ++ +LINNA V+P + D + ++ N
Sbjct: 56 DAAAAAAWLAGDL--LAAFVDGASRVLLINNAGT--VEPIGPLATLDAAAIARAVGLNVA 111
Query: 112 SVFHLSQLAHPLFKASGNGS--IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
+ L+ A AS I+ ISS S+Y A K A++ + +A + A
Sbjct: 112 APLMLT--AALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-A 168
Query: 170 KDNIRTNTVAPWVIKTSM 187
+R ++AP V+ T M
Sbjct: 169 NRALRIVSLAPGVVDTGM 186
|
Length = 243 |
| >gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 5e-09
Identities = 55/212 (25%), Positives = 79/212 (37%), Gaps = 41/212 (19%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLS 59
T ++TG GIG T ELAR GA ++ C + E A +V DL+
Sbjct: 3 TVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLDLA 62
Query: 60 S----REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
S R + + + +L++LINNA + P ED FE F
Sbjct: 63 SLKSIRAFAAEFLAE-----EDRLDVLINNAGV-MRCPYS--KTED-------GFEMQFG 107
Query: 116 LSQLAHPLF--------KASGNGSIVFISSVGGVRG-IPSVSL-----------YGAYKG 155
++ L H L K S IV +SS+ G I L Y K
Sbjct: 108 VNHLGHFLLTNLLLDLLKKSAPSRIVNVSSLAHKAGKINFDDLNSEKSYNTGFAYCQSKL 167
Query: 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187
A T+ LA + N + P V++T +
Sbjct: 168 ANVLFTRELARRLQGTGVTVNALHPGVVRTEL 199
|
Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274 |
| >gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.8 bits (130), Expect = 7e-09
Identities = 53/198 (26%), Positives = 77/198 (38%), Gaps = 30/198 (15%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ--------IELDARLHEWKNKGFKVT 52
T +TG +RGIG A AR GA IV + I A E + G +
Sbjct: 8 TLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAE--EIEAAGGQAL 65
Query: 53 GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
V D+ +Q + F G ++I +NNA+ + T D + + N
Sbjct: 66 PLVGDVRDEDQVAAAVAKAVERF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRG 124
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-------YGAY---KGAMNQLTK 162
F +SQ P K S N I+ +S P ++L + AY K M+ T
Sbjct: 125 TFLVSQACLPHLKKSENPHILTLS--------PPLNLDPKWFAPHTAYTMAKYGMSLCTL 176
Query: 163 NLACEWAKDNIRTNTVAP 180
LA E+ D I N + P
Sbjct: 177 GLAEEFRDDGIAVNALWP 194
|
Length = 273 |
| >gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 9e-09
Identities = 43/195 (22%), Positives = 70/195 (35%), Gaps = 19/195 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD---ARLHEWKNKGFKVTGSVCDL 58
+VTG RGIG L GA + + EL A L ++ V V DL
Sbjct: 11 VVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDL 69
Query: 59 SS-----REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV 113
++ E E+ G +++++ NA IA + + V N V
Sbjct: 70 AAMQAAAEEAVERF---------GGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGV 120
Query: 114 FHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
FH + P G ++ +SS+ P ++ Y A K + L E A +
Sbjct: 121 FHTVRATLPALIERR-GYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGV 179
Query: 174 RTNTVAPWVIKTSMI 188
+ I T ++
Sbjct: 180 TVGSAYLSWIDTDLV 194
|
Length = 296 |
| >gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 9e-09
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 17/198 (8%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL----DARLHEWKNKGFKVTGSVCDL 58
ALVTG T GIG +LAR G + +RN +L D+ ++ K V D
Sbjct: 56 ALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTV--VVDF 113
Query: 59 SS--REQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVF 114
S E +++ ET+ + G +LINN +++ + ++ E + + N E
Sbjct: 114 SGDIDEGVKRIKETIEGLDVG---VLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTT 170
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA---MNQLTKNLACEWAKD 171
++Q P G+I+ I S G IPS LY Y ++Q ++ L E+ K
Sbjct: 171 KVTQAVLPGMLKRKKGAIINIGS-GAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKS 229
Query: 172 NIRTNTVAPWVIKTSMIK 189
I P + T M
Sbjct: 230 GIDVQCQVPLYVATKMAS 247
|
Length = 320 |
| >gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 53.3 bits (128), Expect = 9e-09
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 4/192 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLS 59
T LVTGG GIG L GA V RN +L A E + V D++
Sbjct: 9 TYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVT 68
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+Q + ++ T+ + G+L+ +++ A + + P I ++ N ++ +
Sbjct: 69 DEDQVARAVDAATA-WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLK 127
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A G GS V ISS+ YG K A++ L K A E +R N++
Sbjct: 128 HAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSI 187
Query: 179 APWVIKTSMIKP 190
P +I+T ++ P
Sbjct: 188 RPGLIRTDLVAP 199
|
Length = 276 |
| >gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (128), Expect = 1e-08
Identities = 32/134 (23%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFE 111
D+S E + L E++ GK++ ++++ A A ++ + E + +
Sbjct: 62 LDVSKPEHFKSLAESLKKDL-GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVY 120
Query: 112 SVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
S+ L++ PL + S++ +S +GGV+ +P ++ G K A+ + LA + K
Sbjct: 121 SLIELTRALLPLL--NDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKK 178
Query: 172 NIRTNTVAPWVIKT 185
IR N ++ IKT
Sbjct: 179 GIRVNAISAGPIKT 192
|
Length = 274 |
| >gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 1e-08
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 20/152 (13%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT------VDITAEDMSTVSSTN 109
CD++S E E+ T+ GK++ +++ AIA+ K D + + + +
Sbjct: 62 CDVASDESIERAFATIKERV-GKIDGIVH--AIAYAKKEELGGNVTDTSRDGYALAQDIS 118
Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
S+ +++ A PL SIV ++ G R IP+ ++ G K A+ + LA +
Sbjct: 119 AYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLG 176
Query: 170 KDNIRTNTVAPWVIKTSMIKPFEVLSV-GIKG 200
K IR N ++ +KT L+V GIKG
Sbjct: 177 KKGIRVNAISAGAVKT--------LAVTGIKG 200
|
Length = 252 |
| >gnl|CDD|219957 pfam08659, KR, KR domain | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 1e-08
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 11/156 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVC 56
T LVTGG G+G LA GA +V SR+ E +A L E + +G +VT C
Sbjct: 2 TYLVTGGLGGLGLELARWLAERGARHLV-LLSRSGAPDPEAEALLAELEARGAEVTVVAC 60
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
D+S R+ L+ + + L +I+ A + ++TAED + V
Sbjct: 61 DVSDRDAVRALLAEIRADG-PPLRGVIHAAGVLRDALLANMTAEDFARV----LAPKVTG 115
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152
+ H + V SS+ GV G P + Y A
Sbjct: 116 AWNLHEATRDRPLDFFVLFSSIAGVLGSPGQANYAA 151
|
This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181 |
| >gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 2e-08
Identities = 59/198 (29%), Positives = 87/198 (43%), Gaps = 26/198 (13%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK------NKGFKVTGSVCD 57
L+TG + G+G E A G + C+R D RL E K G KV + D
Sbjct: 6 LITGASSGLGAGMAREFAAKGRDLALCAR---RTD-RLEELKAELLARYPGIKVAVAALD 61
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKP-------TVDITAEDMSTVSSTNF 110
++ +Q ++ G L+ +I NA I TAE TNF
Sbjct: 62 VNDHDQVFEVFAEFRDEL-GGLDRVIVNAGIGKGARLGTGKFWANKATAE-------TNF 113
Query: 111 ESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWA 169
+ + A +F+ G+G +V ISSV VRG+P V + Y A K + L + L E A
Sbjct: 114 VAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELA 173
Query: 170 KDNIRTNTVAPWVIKTSM 187
K I+ +T+ P I++ M
Sbjct: 174 KTPIKVSTIEPGYIRSEM 191
|
Length = 248 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 3e-08
Identities = 48/173 (27%), Positives = 65/173 (37%), Gaps = 34/173 (19%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
M LVTGG IG VE L G V R + LD L V V DL+
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSG-------VEFVVLDLTD 53
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R+ ++L + V I+ AA + V + + V N + +L + A
Sbjct: 54 RDLVDELAKGVPDAV-------IHLAAQSSVPDSNASDPAEFLDV---NVDGTLNLLEAA 103
Query: 121 HPLFKASGNGSIVFISSVGGVRGIP-------------SVSLYGAYKGAMNQL 160
+A+G VF SSV V G P ++ YG K A QL
Sbjct: 104 ----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQL 152
|
Length = 314 |
| >gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10 | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 4e-08
Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 5/183 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLSS 60
A V G G+G A A G V +R + +L+A + ++ G D
Sbjct: 1 VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
++ L + + G L +L+ NA P ++ T V F ++ A
Sbjct: 61 EDEVIALFDLIEEEI-GPLEVLVYNAGANVWFPILETTPRVFEKVWEMAAFGGFLAAREA 119
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A G G+I+F + +RG + + K A+ L +++A E I VA
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIH---VAH 176
Query: 181 WVI 183
+I
Sbjct: 177 VII 179
|
This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238 |
| >gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Score = 50.9 bits (122), Expect = 6e-08
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 7/182 (3%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
M LVTG T G G + G V R Q RL E K++ G + + D+
Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+R E+++ ++ + ++ +++L+NNA +A ++P + ED T+ TN + + ++++
Sbjct: 57 NRAAIEEMLASLPAEWR-NIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTR 115
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
P +G I+ I S G ++YGA K + Q + NL + +R +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175
Query: 179 AP 180
P
Sbjct: 176 EP 177
|
Length = 248 |
| >gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs | Back alignment and domain information |
|---|
Score = 51.2 bits (123), Expect = 6e-08
Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 11/153 (7%)
Query: 4 LVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDA--RLHEWKNKGFKVTGSVCDLS 59
L+TGG G+G LA GA +V SR A R + G +V+ CD++
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLV-LLSRRGPAPRAAARAALLRAGGARVSVVRCDVT 212
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
L+ + + G L +I+ A + ++T + V + +L
Sbjct: 213 DPAALAALLAELAA--GGPLAGVIHAAGVLRDALLAELTPAAFAAVLAAKVAGALNL--- 267
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152
H L V SSV + G + Y A
Sbjct: 268 -HELTPDLPLDFFVLFSSVAALLGGAGQAAYAA 299
|
Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375 |
| >gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 8e-08
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGS------VCD 57
L+TG GIG A +A+ G VH RNQ R E + + +G+ + D
Sbjct: 5 LITGANSGIGKAAALAIAKRGGTVHMVCRNQ----TRAEEARKEIETESGNQNIFLHIVD 60
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
+S +Q + +E + KL++LINNA K ++T + + +TN + L+
Sbjct: 61 MSDPKQVWEFVEEFKEEGK-KLHVLINNAGCMVNKR--ELTEDGLEKNFATNTLGTYILT 117
Query: 118 QLAHPLFKASGNGSIVFISSVG 139
P+ + + ++ +SS G
Sbjct: 118 THLIPVLEKEEDPRVITVSSGG 139
|
Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255 |
| >gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 1e-07
Identities = 51/202 (25%), Positives = 83/202 (41%), Gaps = 20/202 (9%)
Query: 3 ALVTGGTRGIGHATVEELARF----GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
LVTG +RG G +ELA+ G+++ +RN L E G + +G
Sbjct: 3 CLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEI---GAERSGLRVVR 59
Query: 59 SSRE-QREKLIETVTSIFQ--GKLN-----ILINNAAIAFVKPTVDITAEDMSTVSSTNF 110
S + E +E + + + +LINNA + D + V +
Sbjct: 60 VSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWA 119
Query: 111 ESVFHLSQLAHPLFKA-----SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
++ + L + KA N ++V ISS+ ++ +LY A K A + L + LA
Sbjct: 120 LNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLA 179
Query: 166 CEWAKDNIRTNTVAPWVIKTSM 187
E N+R AP V+ T M
Sbjct: 180 LEEKNPNVRVLNYAPGVLDTDM 201
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256 |
| >gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 2e-07
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 1 MTALVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
ALVTG R IG A +LA F VH +R++ E +A E + G + DL
Sbjct: 10 RAALVTGAARRIGRAIALDLAAHGFDVAVH-YNRSRDEAEALAAEIRALGRRAVALQADL 68
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAI 88
+ + L+ ++ G + +L+NNA++
Sbjct: 69 ADEAEVRALVARASAAL-GPITLLVNNASL 97
|
Length = 258 |
| >gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs | Back alignment and domain information |
|---|
Score = 49.1 bits (117), Expect = 2e-07
Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 12/168 (7%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
AL+ G T GIG A LA G + R+ L A L + D+++
Sbjct: 1 ALILGATGGIGRALARALAGRGWRLLLSGRDAGAL-AGLAAEVGALARPA----DVAAEL 55
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP 122
+ L + + G L++L+ A KP + N + L H
Sbjct: 56 EVWALAQEL-----GPLDLLVYAAGAILGKPLARTKPAAWRRILDANLTGAALV--LKHA 108
Query: 123 LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK 170
L + +VF+ + + +P +S Y A K A+ + E
Sbjct: 109 LALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVRG 156
|
Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206 |
| >gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 3e-07
Identities = 53/214 (24%), Positives = 82/214 (38%), Gaps = 24/214 (11%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLSS 60
A+VTG + IG + L + G V + L N + C DLS+
Sbjct: 4 AVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSN 63
Query: 61 R----EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
+ E +I+ F G+ ++L+NNA+ + P + A + + V L
Sbjct: 64 SATLFSRCEAIIDACFRAF-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAEL 122
Query: 117 --SQLAHPLF---------------KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
S P F + S N SIV + + + ++Y K A+
Sbjct: 123 FGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEG 182
Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193
LT++ A E A IR N VAP + PFEV
Sbjct: 183 LTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEV 216
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267 |
| >gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 7e-07
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 6/184 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ L+TG + GIG L G V R + ++ A L + +G + D +
Sbjct: 6 SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV-AAL---EAEG--LEAFQLDYAEP 59
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E L+ V + G+L+ L NN A D+ E + NF L++
Sbjct: 60 ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVI 119
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P+ + G G IV SS+ G+ + Y A K A+ L+ L E I + + P
Sbjct: 120 PVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPG 179
Query: 182 VIKT 185
I+T
Sbjct: 180 PIET 183
|
Length = 277 |
| >gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 1e-06
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMSTVSSTN 109
D+ Q E + + + G+L+ L++ +IAF VD + E + +
Sbjct: 67 LDVREPGQLEAVFARIAEEW-GRLDFLLH--SIAFAPKEDLHGRVVDCSREGFALAMDVS 123
Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
S +++LA PL G S++ +S G + + + +L G K A+ + LA E
Sbjct: 124 CHSFIRMARLAEPLMTNGG--SLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELG 181
Query: 170 KDNIRTNTVAPWVIKT---SMIKPFEVL 194
IR + ++P +KT S I F+ L
Sbjct: 182 PKGIRVHAISPGPLKTRAASGIDDFDAL 209
|
Length = 258 |
| >gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 1e-06
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 8/181 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA--RLHEWKNKGFKVTGSVCDLS 59
T L+TG + G G A + G V R++ LH + + D++
Sbjct: 6 TWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALH-----PDRALARLLDVT 60
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ + ++ + F G +++L+NNA + +M N +++
Sbjct: 61 DFDAIDAVVADAEATF-GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKA 119
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P +A G IV I+S+GG+ +P + Y K A+ ++++LA E A I V
Sbjct: 120 VLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVE 179
Query: 180 P 180
P
Sbjct: 180 P 180
|
Length = 277 |
| >gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 1e-06
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
TALVTG +RGIG T + LA GA V R + + + E + G + + DL+
Sbjct: 8 TALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD 67
Query: 61 REQREKLIETVTSIFQGKLNILINNAA 87
E L++T F G L+ L+ NA+
Sbjct: 68 EESVAALMDTAREEF-GGLDALVLNAS 93
|
Length = 248 |
| >gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.8 bits (111), Expect = 1e-06
Identities = 46/187 (24%), Positives = 70/187 (37%), Gaps = 12/187 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG T GIG + A+ G V C RNQ LD LH F + V D
Sbjct: 3 AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-LHTQSANIFTLAFDVTD---- 57
Query: 62 EQREKLIETVTSI-FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
++ + F +L I N ++ + A M+ V + N V + +
Sbjct: 58 --HPGTKAALSQLPFIPELWIF-NAGDCEYMDDGK-VDATLMARVFNVNVLGVANCIEGI 113
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P S +V + S+ +P YGA K A+ + L + I TV P
Sbjct: 114 QPHL--SCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFP 171
Query: 181 WVIKTSM 187
+ T +
Sbjct: 172 GFVATPL 178
|
Length = 240 |
| >gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 1e-06
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 11/197 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGA---IVHTCS-RNQIELDARLHEWKNKGFKVTGSVCD 57
L+ GG + +G +LA GA +H S ++ + + + K G K D
Sbjct: 10 VVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQAD 69
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
L++ EKL + + F G+ +I IN KP V+I+ + + + N +S F
Sbjct: 70 LTTAAAVEKLFDDAKAAF-GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFI 128
Query: 118 QLAHPLFKASGNGSIVFI--SSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+ A + NG IV + S +G P S Y K + T+ + E+ I
Sbjct: 129 KEAGR--HLNDNGKIVTLVTSLLGAF--TPFYSAYAGSKAPVEHFTRAASKEFGARGISV 184
Query: 176 NTVAPWVIKTSMIKPFE 192
V P + T P E
Sbjct: 185 TAVGPGPMDTPFFYPQE 201
|
Length = 257 |
| >gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.3 bits (110), Expect = 3e-06
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 17/194 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALV G + GIG AT ELA G V +R + + + + + G + D++
Sbjct: 12 PALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP 71
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF--HL--- 116
+ + + G++ +L++ A D + +S+ FES HL
Sbjct: 72 DSVKSFVAQAEEAL-GEIEVLVSGAG--------DTYFGKLHEISTEQFESQVQIHLVGA 122
Query: 117 SQLAH---PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
++LA P G ++F+ S +R P + YGA K + + NL E +
Sbjct: 123 NRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGV 182
Query: 174 RTNTVAPWVIKTSM 187
R + V P T M
Sbjct: 183 RASIVHPGPTLTGM 196
|
Length = 274 |
| >gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 3e-06
Identities = 58/195 (29%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 3 ALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSV------ 55
ALVTG RGIG L G +V +LD + +G KV ++
Sbjct: 13 ALVTGAARGIGLGIAAWLIAEGWQVVLA------DLD------RERGSKVAKALGENAWF 60
Query: 56 --CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS-----TVSST 108
D++ Q + V F G+L+ L+ NAAIA P + T E +S V +
Sbjct: 61 IAMDVADEAQVAAGVAEVLGQF-GRLDALVCNAAIA--DPH-NTTLESLSLAHWNRVLAV 116
Query: 109 NFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
N L++ P +A NG+IV ++S + P Y A KG + LT LA
Sbjct: 117 NLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISL 175
Query: 169 AKDNIRTNTVAP-WV 182
+ IR N V+P W+
Sbjct: 176 GPE-IRVNAVSPGWI 189
|
Length = 255 |
| >gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 45.7 bits (108), Expect = 4e-06
Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 9/140 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR----LHEWKNKGFKVTGSVCD 57
++TG GIG T A GA V RN A L EW +V D
Sbjct: 3 VIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKA--RVEAMTLD 60
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
L+S ++ E + L++L+ NAA+ F P +T + + T N F+L
Sbjct: 61 LASLRSVQRFAEAFKAK-NSPLHVLVCNAAV-FALPWT-LTEDGLETTFQVNHLGHFYLV 117
Query: 118 QLAHPLFKASGNGSIVFISS 137
QL + + S ++ +SS
Sbjct: 118 QLLEDVLRRSAPARVIVVSS 137
|
Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284 |
| >gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 6e-06
Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 23/204 (11%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDARLH----------EWKNKGF 49
+VTG GIG A A GA V N I LD E G
Sbjct: 8 VVIVTGAGGGIGRAHALAFAAEGARVVV---NDIGVGLDGSASGGSAAQAVVDEIVAAGG 64
Query: 50 KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
+ + D++ + L++ F G L++L+NNA I + +++ E+ V + +
Sbjct: 65 EAVANGDDIADWDGAANLVDAAVETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVH 123
Query: 110 FESVFHLSQLAHPLFKASG------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN 163
+ F + A ++A + I+ SS G++G Y A K + LT
Sbjct: 124 LKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTLV 183
Query: 164 LACEWAKDNIRTNTVAPWVIKTSM 187
A E + + N +AP +T M
Sbjct: 184 AAAELGRYGVTVNAIAP-AARTRM 206
|
Length = 286 |
| >gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Score = 44.9 bits (107), Expect = 6e-06
Identities = 42/195 (21%), Positives = 71/195 (36%), Gaps = 27/195 (13%)
Query: 1 MTA--LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
M A L+TG + IG A L G V R A + + G D
Sbjct: 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRT--HYPA-IDGLRQAG--AQCIQADF 55
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF---- 114
S+ I+ + G L +I+NA+ D AE + +
Sbjct: 56 STNAGIMAFIDELKQHTDG-LRAIIHNAS--------DWLAEKPGAPLADVLARMMQIHV 106
Query: 115 ----HLSQLAHPLFKASGNGS--IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
L+ L + G+ + I+ I+ +G Y A K A++ +T + A +
Sbjct: 107 NAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKL 166
Query: 169 AKDNIRTNTVAPWVI 183
A ++ N++AP +I
Sbjct: 167 AP-EVKVNSIAPALI 180
|
Length = 236 |
| >gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-05
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 27/205 (13%)
Query: 2 TALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLH----EWKNKGFKVTGS 54
T +TG +RGIG A + AR GA I + +L ++ E + G K
Sbjct: 5 TLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGKALPC 64
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
+ D+ +Q +E F G ++IL+NNA+ + T+D + + N +
Sbjct: 65 IVDIRDEDQVRAAVEKAVEKF-GGIDILVNNASAISLTGTLDTPMKRYDLMMGVNTRGTY 123
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL----------YGAYKGAMNQLTKNL 164
S+ P K S N I+ +S P ++L Y K M+ +
Sbjct: 124 LCSKACLPYLKKSKNPHILNLS--------PPLNLNPKWFKNHTAYTMAKYGMSMCVLGM 175
Query: 165 ACEWAKDNIRTNTVAP-WVIKTSMI 188
A E+ I N + P I T+ +
Sbjct: 176 AEEFKPGGIAVNALWPRTAIATAAM 200
|
This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243 |
| >gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 6e-05
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSS 60
A+VTG + G+G LA GA V RN+ + +A + + K++ DLSS
Sbjct: 17 AVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS 76
Query: 61 REQREKLIETVTSIFQGK-LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
L E + + +G+ +++LINNA + P TA+ FE F + L
Sbjct: 77 LASVAALGEQLRA--EGRPIHLLINNAGV-MTPPERQTTAD--------GFELQFGTNHL 125
Query: 120 AH--------PLFKASGNGSIVFISSVGGVRG 143
H PL +A G + SS+ RG
Sbjct: 126 GHFALTAHLLPLLRA-GRARVTSQSSIAARRG 156
|
Length = 313 |
| >gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 8e-05
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 16/190 (8%)
Query: 2 TALVTGGTRGIGHATVEEL-ARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
T +TG + G G E L AR + T R D L V D++
Sbjct: 4 TWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD--LKARYGDRLWV--LQLDVTD 59
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+++ + G+++++++NA +++ + TN + + A
Sbjct: 60 SAAVRAVVDRAFAAL-GRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAA 118
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + G G IV +SS GG P SLY A K + + +A E VAP
Sbjct: 119 LPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQE----------VAP 168
Query: 181 WVIKTSMIKP 190
+ I+ ++++P
Sbjct: 169 FGIEFTIVEP 178
|
Length = 276 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 8e-05
Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 36/176 (20%)
Query: 3 ALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
LVTGGT IG V L + G IV R L+ + DL+
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGRIRFHE---------GDLTD 51
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ E+L+ + + + +I+ AA + V + + A+ + N L + A
Sbjct: 52 PDALERLLA------EVQPDAVIHLAAQSGVGASFEDPADFI----RANVLGTLRLLEAA 101
Query: 121 HPLFKASGNGSIVFISSV---GGVRGIPS--------VSLYGAYKGAMNQLTKNLA 165
+G VF SS G V P +S Y A K A +L + A
Sbjct: 102 R----RAGVKRFVFASSSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYA 153
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 9e-05
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 95 VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154
VD + E+ + S+ LS+ A L GSIV ++ G + IP+ ++ G K
Sbjct: 107 VDTSLENFHNSLHISCYSLLELSRSAEALM--HDGGSIVTLTYYGAEKVIPNYNVMGVAK 164
Query: 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185
A+ K LA + ++NIR N ++ IKT
Sbjct: 165 AALEASVKYLANDMGENNIRVNAISAGPIKT 195
|
Length = 260 |
| >gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 3e-04
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
CD++S ++ ++ + + G L+ L++ +I F P ++ + + ++S F +
Sbjct: 63 CDVASDDEINQVFADLGKHWDG-LDGLVH--SIGFA-PKEALSGDFLDSISREAFNTAHE 118
Query: 116 LSQLAHP-LFKASG------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
+S + P L KA+ N +IV +S +G VR IP+ ++ G K ++ + A
Sbjct: 119 ISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACL 178
Query: 169 AKDNIRTNTVAPWVIKT 185
K+ IR N ++ IKT
Sbjct: 179 GKEGIRCNGISAGPIKT 195
|
Length = 261 |
| >gnl|CDD|181609 PRK09009, PRK09009, C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 3e-04
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 46/215 (21%)
Query: 1 MTALVTGGTRGIGHATVEEL-ARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
M L+ GG+ GIG A V++L R+ A VH R+ ++++ V D+
Sbjct: 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP------DFQHD--NVQWHALDV 52
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAE-DMSTVSSTNFESVFHLS 117
+ + ++L E T + + LIN + T D E + + + F L+
Sbjct: 53 TDEAEIKQLSEQFTQL-----DWLINCVGMLH---TQDKGPEKSLQALDADFFLQNITLN 104
Query: 118 QLAH--------PLFKASGNGSIVFISS-VGGVRGIPSVS--------LYGAYKGAMNQL 160
L P K S + IS+ VG S+S Y A K A+N
Sbjct: 105 TLPSLLLAKHFTPKLKQSESAKFAVISAKVG------SISDNRLGGWYSYRASKAALNMF 158
Query: 161 TKNLACEWAKDNIRTNTVA---PWVIKTSMIKPFE 192
K L+ EW + +++ V P T++ KPF+
Sbjct: 159 LKTLSIEWQR-SLKHGVVLALHPGTTDTALSKPFQ 192
|
Length = 235 |
| >gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 5e-04
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT------VDITAEDMSTVSSTN 109
CD++ + + ET+ + GKL+ +++ AI F VD + ++ + +
Sbjct: 67 CDVTDEASIDAVFETLEKKW-GKLDFVVH--AIGFSDKDELTGRYVDTSRDNFTMTMDIS 123
Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
S ++Q A L G SI+ ++ G + +P ++ G K A+ K LA +
Sbjct: 124 VYSFTAVAQRAEKLMTDGG--SILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLG 181
Query: 170 KDNIRTNTVAPWVIKT 185
NIR N ++ IKT
Sbjct: 182 PKNIRVNAISAGPIKT 197
|
Length = 272 |
| >gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.001
Identities = 43/195 (22%), Positives = 63/195 (32%), Gaps = 50/195 (25%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVH---TCSRNQIELDARLHEWKNKGFKVTGSVCD 57
M L+TGG IG + G V R + + + V D
Sbjct: 1 MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAWLKANREDGGVRFVHGD 60
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
+ +R E L E + I I+ AA +P+V +A TN ++
Sbjct: 61 IRNRNDLEDLFEDIDLI--------IHTAA----QPSVTTSASSPRLDFETNALGTLNVL 108
Query: 118 QLAHPLFKASGNGSIVFISS--VGGVR-----------------------GIP------- 145
+ A + + N +F S+ V G GI
Sbjct: 109 EAAR---QHAPNAPFIFTSTNKVYGDLPNYLPLEELETRYELAPEGWSPAGISESFPLDF 165
Query: 146 SVSLYGAYKGAMNQL 160
S SLYGA KGA +Q
Sbjct: 166 SHSLYGASKGAADQY 180
|
CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337 |
| >gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Score = 38.2 bits (89), Expect = 0.001
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 130 GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185
GSIV ++ +GG R + + ++ G K ++ K LA + KD IR N ++ I+T
Sbjct: 141 GSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRT 196
|
Length = 257 |
| >gnl|CDD|236057 PRK07578, PRK07578, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 37.5 bits (88), Expect = 0.002
Identities = 44/190 (23%), Positives = 70/190 (36%), Gaps = 28/190 (14%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV-CDLS 59
M LV G + IG A V EL++ ++ T R+ G V D++
Sbjct: 1 MKILVIGASGTIGRAVVAELSKRHEVI-TAGRSS------------------GDVQVDIT 41
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
L E V GK++ +++ A P ++T ED + + +L +
Sbjct: 42 DPASIRALFEKV-----GKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLI 96
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
+ GS S + IP + GA+ K A E IR N V+
Sbjct: 97 GQH--YLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALE-LPRGIRINVVS 153
Query: 180 PWVIKTSMIK 189
P V+ S+ K
Sbjct: 154 PTVLTESLEK 163
|
Length = 199 |
| >gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs | Back alignment and domain information |
|---|
Score = 36.7 bits (85), Expect = 0.004
Identities = 45/193 (23%), Positives = 74/193 (38%), Gaps = 19/193 (9%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
+TG + G+G A L G V +R+Q + G DLSS +
Sbjct: 11 FITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAGVLIG---DLSSLAE 67
Query: 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP- 122
KL + V +I G+ + +I+NA I P + + + N + + L+ L
Sbjct: 68 TRKLADQVNAI--GRFDAVIHNAGI-LSGPNRKTPDTGIPAMVAVNVLAPYVLTALIRRP 124
Query: 123 ---LFKAS-----GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
++ +S GN S+ I RG Y K + L +A W ++
Sbjct: 125 KRLIYLSSGMHRGGNASLDDIDWFN--RGENDSPAYSDSKLHVLTLAAAVARRWK--DVS 180
Query: 175 TNTVAPWVIKTSM 187
+N V P + T M
Sbjct: 181 SNAVHPGWVPTKM 193
|
Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 202 | |||
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 100.0 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 100.0 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 100.0 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 100.0 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 100.0 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 100.0 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 100.0 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 100.0 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK08643 | 256 | acetoin reductase; Validated | 100.0 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 100.0 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 100.0 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 100.0 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 100.0 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 100.0 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 100.0 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 100.0 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 100.0 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 100.0 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 100.0 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 100.0 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 100.0 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 100.0 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 100.0 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 100.0 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 100.0 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 100.0 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 100.0 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 100.0 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 100.0 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 100.0 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 100.0 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 100.0 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 100.0 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 100.0 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 100.0 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 100.0 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 100.0 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05717 | 255 | oxidoreductase; Validated | 100.0 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PLN00015 | 308 | protochlorophyllide reductase | 100.0 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 100.0 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 100.0 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 100.0 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 100.0 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 100.0 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 100.0 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 100.0 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 100.0 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 100.0 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 100.0 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 100.0 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 100.0 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 100.0 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 100.0 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 100.0 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 100.0 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 100.0 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 100.0 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 100.0 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 100.0 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 100.0 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 100.0 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 100.0 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 100.0 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 100.0 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 100.0 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 100.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 100.0 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 100.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 100.0 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 100.0 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 100.0 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 100.0 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 100.0 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 100.0 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 100.0 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 100.0 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 100.0 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 100.0 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 100.0 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 100.0 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.98 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.97 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.97 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.96 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.96 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 99.96 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.96 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.95 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.95 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.95 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.94 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.94 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.93 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.92 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 99.91 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.9 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.9 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.89 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.86 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.86 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.86 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.86 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.86 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.85 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.85 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.84 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.84 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.84 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.84 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.83 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.82 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.82 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.81 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.81 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.81 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.8 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.8 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.79 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.79 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.79 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.78 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.78 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.77 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.76 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.75 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.74 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.73 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.71 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.7 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.69 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.69 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.69 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.69 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.68 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.67 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.67 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.67 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.66 | |
| PF08643 | 299 | DUF1776: Fungal family of unknown function (DUF177 | 99.65 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.64 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.64 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.64 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.62 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.62 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.57 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.53 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.5 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.49 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.49 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.45 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.44 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 99.43 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.43 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.39 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.34 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.33 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.3 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.29 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.28 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.27 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.26 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.23 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 99.23 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.2 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.17 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.0 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.98 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 98.97 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.95 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 98.92 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.89 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.78 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.78 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.76 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 98.76 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 98.7 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.66 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 98.62 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 98.6 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.57 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 98.54 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.52 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 98.52 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.37 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 98.33 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.3 | |
| PLN00106 | 323 | malate dehydrogenase | 98.28 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.2 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.18 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.18 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 98.17 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.07 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.05 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 97.98 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 97.96 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.91 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.84 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 97.8 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 97.79 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.75 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.72 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 97.71 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 97.69 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 97.68 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.61 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.61 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.59 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 97.59 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 97.54 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.53 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.49 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.39 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 97.38 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.37 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.36 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.35 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 97.32 | |
| PRK14968 | 188 | putative methyltransferase; Provisional | 97.31 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.31 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 97.29 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.27 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 97.24 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 97.23 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 97.21 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 97.2 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.17 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 97.16 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.15 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 97.14 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.13 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 97.13 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 97.11 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.11 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.1 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.1 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.07 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 97.06 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.05 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.03 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 97.01 | |
| PF12242 | 78 | Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2 | 97.01 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.01 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 97.01 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 96.99 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.99 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 96.97 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.94 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 96.94 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 96.94 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.91 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.87 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 96.85 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.85 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.83 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.82 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 96.79 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 96.78 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 96.73 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.72 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.72 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 96.71 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.68 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.67 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 96.67 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.66 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.66 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.65 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.62 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.61 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.59 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 96.58 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 96.56 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.54 | |
| PLN02602 | 350 | lactate dehydrogenase | 96.54 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 96.53 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.53 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 96.53 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 96.52 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.52 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 96.51 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.5 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.5 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.49 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.43 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 96.42 | |
| PF12076 | 164 | Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194 | 96.41 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.39 | |
| PRK04308 | 445 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.35 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 96.34 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.33 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.33 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 96.33 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 96.3 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.29 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.25 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 96.25 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 96.21 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 96.21 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.21 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 96.21 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.2 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 96.2 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.19 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.18 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 96.18 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 96.16 | |
| COG3007 | 398 | Uncharacterized paraquat-inducible protein B [Func | 96.16 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 96.15 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.14 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 96.13 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.13 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 96.12 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 96.12 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 96.12 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 96.11 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 96.09 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 96.07 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.05 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.04 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 96.01 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.0 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.99 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.97 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.97 | |
| PRK14620 | 326 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 95.96 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 95.93 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 95.93 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 95.93 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.92 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 95.89 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 95.88 | |
| PF00070 | 80 | Pyr_redox: Pyridine nucleotide-disulphide oxidored | 95.85 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 95.83 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 95.82 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 95.81 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.8 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 95.75 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.75 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 95.73 | |
| cd01486 | 307 | Apg7 Apg7 is an E1-like protein, that activates tw | 95.69 | |
| KOG2013 | 603 | consensus SMT3/SUMO-activating complex, catalytic | 95.68 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 95.68 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 95.65 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 95.63 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.62 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 95.58 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 95.57 | |
| PRK00141 | 473 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 95.55 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 95.55 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 95.54 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 95.54 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.53 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 95.52 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 95.5 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 95.48 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 95.46 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.44 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 95.44 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 95.42 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.4 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 95.4 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 95.39 | |
| cd01488 | 291 | Uba3_RUB Ubiquitin activating enzyme (E1) subunit | 95.38 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 95.37 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 95.37 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 95.35 | |
| TIGR01381 | 664 | E1_like_apg7 E1-like protein-activating enzyme Gsa | 95.33 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 95.32 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 95.3 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 95.27 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.23 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 95.23 | |
| PRK07411 | 390 | hypothetical protein; Validated | 95.23 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 95.21 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 95.19 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 95.17 |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=282.16 Aligned_cols=188 Identities=26% Similarity=0.389 Sum_probs=182.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|||||+|||.++|++|+++|++|++++|+++++..+.++++.. +..+.++.+|+++.++++.+.+++.+.. .+|
T Consensus 7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~-~~I 85 (265)
T COG0300 7 KTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG-GPI 85 (265)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC-Ccc
Confidence 68999999999999999999999999999999999999999999865 5789999999999999999999999986 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||||+...+++.+.++++.++++++|+.+++.++++++|.|.+++.|.||+++|.++..+.|..+.|++||+++.+
T Consensus 86 dvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~ 165 (265)
T COG0300 86 DVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLS 165 (265)
T ss_pred cEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+++|+.|+.++||+|.+|+||++.|+++.
T Consensus 166 fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~ 195 (265)
T COG0300 166 FSEALREELKGTGVKVTAVCPGPTRTEFFD 195 (265)
T ss_pred HHHHHHHHhcCCCeEEEEEecCcccccccc
Confidence 999999999999999999999999999996
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-45 Score=275.19 Aligned_cols=189 Identities=28% Similarity=0.408 Sum_probs=179.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|||||||||.++|++|++.|++|++++|+.++++.+..++.+ ..+....+|++|.++++++++.+.+.| +++|
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~~-g~iD 83 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEEF-GRID 83 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHhh-Cccc
Confidence 6899999999999999999999999999999999999999998865 679999999999999999999999999 8999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|+.++++|+.|.++.+++++|.|.+++.|.||++||++|..++|+.+.|+++|+++..|
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~f 163 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAF 163 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHH
Confidence 99999999877899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++.|+.|+..++|||.+|+||.+.|..+...+
T Consensus 164 s~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~ 195 (246)
T COG4221 164 SLGLRQELAGTGIRVTVISPGLVETTEFSTVR 195 (246)
T ss_pred HHHHHHHhcCCCeeEEEecCceecceeccccc
Confidence 99999999999999999999999887665443
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-45 Score=283.37 Aligned_cols=193 Identities=31% Similarity=0.370 Sum_probs=177.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CC-eEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GF-KVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+|+|||||+|||.++|++|+++|++++++.|..++++...+++.+. .. ++.++++|++|++++.++++++..+| +.
T Consensus 13 kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f-g~ 91 (282)
T KOG1205|consen 13 KVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF-GR 91 (282)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc-CC
Confidence 78999999999999999999999999999999999998887777654 33 49999999999999999999999999 89
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++|||||+......++.+.+++.++|++|+.|+..++++++|+|++++.|+||++||++|.++.|..+.|++||+|+.
T Consensus 92 vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~ 171 (282)
T KOG1205|consen 92 VDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALE 171 (282)
T ss_pred CCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHHH
Confidence 99999999999866778889999999999999999999999999999987899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCC--cEEEEeeCCcccCCCccchhhhc
Q 028868 159 QLTKNLACEWAKDN--IRTNTVAPWVIKTSMIKPFEVLS 195 (202)
Q Consensus 159 ~~~~~la~e~~~~g--i~v~~v~pG~v~t~~~~~~~~~~ 195 (202)
+|+.+|+.|+.+.+ |++ +|+||+|+|++........
T Consensus 172 ~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~~~~~ 209 (282)
T KOG1205|consen 172 GFFETLRQELIPLGTIIII-LVSPGPIETEFTGKELLGE 209 (282)
T ss_pred HHHHHHHHHhhccCceEEE-EEecCceeecccchhhccc
Confidence 99999999999877 666 9999999999876554443
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-41 Score=264.69 Aligned_cols=188 Identities=25% Similarity=0.323 Sum_probs=173.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++...+++.+. +.++.++.+|++|+++++++++++. .+ +++
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~-g~i 86 (263)
T PRK08339 9 KLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NI-GEP 86 (263)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hh-CCC
Confidence 68999999999999999999999999999999998888887777543 4578899999999999999999986 46 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|++++.|+||++||.++..+.++...|+++|+++.+
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~ 166 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAG 166 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHH
Confidence 99999999876677888999999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|+++++.|++++|||||+|+||+++|++...
T Consensus 167 l~~~la~el~~~gIrVn~v~PG~v~T~~~~~ 197 (263)
T PRK08339 167 LVRTLAKELGPKGITVNGIMPGIIRTDRVIQ 197 (263)
T ss_pred HHHHHHHHhcccCeEEEEEEeCcCccHHHHH
Confidence 9999999999999999999999999998653
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-42 Score=248.02 Aligned_cols=192 Identities=29% Similarity=0.332 Sum_probs=177.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|.++||||++|||+++++.|+++|++|++.+++.+..+.....+... .+-..+.||+++.++++..+++..+++ ++++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~k~~-g~ps 92 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEMEKSL-GTPS 92 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHHHhc-CCCc
Confidence 57899999999999999999999999999999988777777766543 467788999999999999999999998 6999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHh--cCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK--ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+++||||+.....+..++.++|++.+.+|+.|.|.++|++.+-|- .+.+.+||++||+.+..++.++..|+++|+++.
T Consensus 93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvI 172 (256)
T KOG1200|consen 93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVI 172 (256)
T ss_pred EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCcee
Confidence 999999999888888999999999999999999999999999843 444569999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchhhh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~ 194 (202)
+|+|+.++|+++++||||.|+||+|.|||+..+++.
T Consensus 173 gftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~ 208 (256)
T KOG1200|consen 173 GFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPK 208 (256)
T ss_pred eeeHHHHHHHhhcCceEeEeccccccChhhhhcCHH
Confidence 999999999999999999999999999999988764
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-40 Score=257.35 Aligned_cols=188 Identities=30% Similarity=0.419 Sum_probs=179.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++||||||++|+|+++|.+|+++|+++++.|.+.+..++..+++.+.| ++..+.||++|.+++.+..++++++. |++|
T Consensus 39 ~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e~-G~V~ 116 (300)
T KOG1201|consen 39 EIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKEV-GDVD 116 (300)
T ss_pred CEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHhc-CCce
Confidence 479999999999999999999999999999999999999999987665 89999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+....++.+.+.+++++++++|+.|++.++|+|+|.|-+++.|.||+++|.+|..+.++...|++||+|+.+|
T Consensus 117 ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGf 196 (300)
T KOG1201|consen 117 ILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGF 196 (300)
T ss_pred EEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred HHHHHHHHc---cCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWA---KDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~---~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++|..|+. ..||+...|+|++++|+|+..
T Consensus 197 hesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~ 229 (300)
T KOG1201|consen 197 HESLSMELRALGKDGIKTTLVCPYFINTGMFDG 229 (300)
T ss_pred HHHHHHHHHhcCCCCeeEEEEeeeeccccccCC
Confidence 999999985 457999999999999999984
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-40 Score=258.01 Aligned_cols=189 Identities=28% Similarity=0.386 Sum_probs=176.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||++++++|+++|++|++++|++++++...+++.. .+.++.++++|++|++++.++++++.+.+ ++
T Consensus 8 k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~ 86 (260)
T PRK07063 8 KVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF-GP 86 (260)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence 6899999999999999999999999999999999988888888765 45678899999999999999999999998 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++|||||.....+..+.+.++|+..+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|++++
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~ 166 (260)
T PRK07063 87 LDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLL 166 (260)
T ss_pred CcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHH
Confidence 99999999987666677789999999999999999999999999998877789999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++.|+++.||+||+|+||+++|++...
T Consensus 167 ~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~ 198 (260)
T PRK07063 167 GLTRALGIEYAARNVRVNAIAPGYIETQLTED 198 (260)
T ss_pred HHHHHHHHHhCccCeEEEEEeeCCccChhhhh
Confidence 99999999999999999999999999998754
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=256.78 Aligned_cols=188 Identities=28% Similarity=0.360 Sum_probs=170.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.. +...+++...+.++.++.+|++++++++++++++.+.+ +++|
T Consensus 9 k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~iD 85 (251)
T PRK12481 9 KVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM-GHID 85 (251)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999988642 33444555556789999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .|+||++||..+..+.++...|++||+++++
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~ 165 (251)
T PRK12481 86 ILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMG 165 (251)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHH
Confidence 999999988777788899999999999999999999999999997654 5899999999999998999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++.|+.++||+||+|+||+++|++....
T Consensus 166 l~~~la~e~~~~girvn~v~PG~v~t~~~~~~ 197 (251)
T PRK12481 166 LTRALATELSQYNINVNAIAPGYMATDNTAAL 197 (251)
T ss_pred HHHHHHHHHhhcCeEEEEEecCCCccCchhhc
Confidence 99999999999999999999999999987643
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=257.53 Aligned_cols=187 Identities=28% Similarity=0.436 Sum_probs=173.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+ +.+....+++.+.+.++.++.+|++++++++++++++.+.+ +++|
T Consensus 7 k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 84 (272)
T PRK08589 7 KVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF-GRVD 84 (272)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc-CCcC
Confidence 689999999999999999999999999999999 77778888887667789999999999999999999999998 7899
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||... ..++.+.+.+.|++++++|+.+++.+++.++|+|.+++ |+||++||..+..+.++...|++||+++++
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaal~~ 163 (272)
T PRK08589 85 VLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAADLYRSGYNAAKGAVIN 163 (272)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCCCCCchHHHHHHHHHH
Confidence 9999999864 35677889999999999999999999999999998764 899999999999998999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|+++++.|+.++||+||+|+||+++|++...
T Consensus 164 l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~ 194 (272)
T PRK08589 164 FTKSIAIEYGRDGIRANAIAPGTIETPLVDK 194 (272)
T ss_pred HHHHHHHHhhhcCeEEEEEecCcccCchhhh
Confidence 9999999999999999999999999998764
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-40 Score=259.31 Aligned_cols=184 Identities=22% Similarity=0.307 Sum_probs=162.1
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+ +|||+++|++|+++|++|++++|+++ ..+..+++. +.+.. .++++|++|.++++++++++.+.+ +
T Consensus 6 k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~~~-g 82 (274)
T PRK08415 6 KKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKKDL-G 82 (274)
T ss_pred cEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHHHc-C
Confidence 789999997 89999999999999999999999853 222333332 22333 678999999999999999999998 7
Q ss_pred CccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 78 KLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 78 ~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
++|++|||||+.. ..++.+.+.++|+.++++|+.+++.+++.++|+|.+ .|+||++||.++..+.|++..|++|
T Consensus 83 ~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~~~~~~~~~~Y~as 160 (274)
T PRK08415 83 KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGGVKYVPHYNVMGVA 160 (274)
T ss_pred CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCCccCCCcchhhhhH
Confidence 9999999999864 256778899999999999999999999999999975 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+|+.+|+++++.|+.++||+||+|+||+++|++..
T Consensus 161 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~ 196 (274)
T PRK08415 161 KAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAAS 196 (274)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHh
Confidence 999999999999999999999999999999998754
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-40 Score=258.33 Aligned_cols=184 Identities=19% Similarity=0.256 Sum_probs=162.5
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++ |||+++|++|+++|++|++++|+++..+. .+++.+ .+. ...+++|++|.++++++++++.+++ +
T Consensus 8 k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~-~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~~-g 84 (271)
T PRK06505 8 KRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKR-VKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKKW-G 84 (271)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHH-HHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHHh-C
Confidence 6899999996 99999999999999999999998643333 333322 232 3578999999999999999999998 7
Q ss_pred CccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 78 KLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 78 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
++|++|||||+... .++.+.+.++|+..+++|+.+++.++++++|+|.+ .|+||++||.++..+.|++..|++|
T Consensus 85 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~as 162 (271)
T PRK06505 85 KLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGSTRVMPNYNVMGVA 162 (271)
T ss_pred CCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCccccCCccchhhhh
Confidence 99999999998643 46678899999999999999999999999999974 4899999999998899999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+|+.+|+++|+.|++++|||||+|+||+++|++..
T Consensus 163 KaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~ 198 (271)
T PRK06505 163 KAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGA 198 (271)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccc
Confidence 999999999999999999999999999999999864
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=254.86 Aligned_cols=189 Identities=28% Similarity=0.404 Sum_probs=176.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+. +.++..+.+|++|+++++++++++.+.+ ++
T Consensus 9 k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 87 (265)
T PRK07062 9 RVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF-GG 87 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc-CC
Confidence 68999999999999999999999999999999998888887777654 3478899999999999999999999998 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.++...|+++|+++.
T Consensus 88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~ 167 (265)
T PRK07062 88 VDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLL 167 (265)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHH
Confidence 99999999988777888899999999999999999999999999999877799999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++.|+.++||+||+|+||+++|++...
T Consensus 168 ~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~ 199 (265)
T PRK07062 168 NLVKSLATELAPKGVRVNSILLGLVESGQWRR 199 (265)
T ss_pred HHHHHHHHHhhhcCeEEEEEecCccccchhhh
Confidence 99999999999999999999999999998653
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-40 Score=255.49 Aligned_cols=183 Identities=23% Similarity=0.325 Sum_probs=164.7
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+ +|||+++|++|+++|++|++++|+. +..+..+++. +..+.++++|++|+++++++++++.+.+ ++
T Consensus 8 k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 83 (252)
T PRK06079 8 KKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATIKERV-GK 83 (252)
T ss_pred CEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHHHHHh-CC
Confidence 789999999 7999999999999999999999984 4444444443 2357889999999999999999999998 79
Q ss_pred ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|++|||||.... .++.+.+.++|+..+++|+.+++.+++.++|+|++ .|+||++||.++..+.+++..|++||
T Consensus 84 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~asK 161 (252)
T PRK06079 84 IDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGSERAIPNYNVMGIAK 161 (252)
T ss_pred CCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCccccCCcchhhHHHH
Confidence 9999999998643 56788899999999999999999999999999964 58999999999999989999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++.+|+++++.|+.++||+||+|+||+|+|++..
T Consensus 162 aal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~ 196 (252)
T PRK06079 162 AALESSVRYLARDLGKKGIRVNAISAGAVKTLAVT 196 (252)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCcccccccc
Confidence 99999999999999999999999999999999864
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=261.54 Aligned_cols=189 Identities=26% Similarity=0.375 Sum_probs=178.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+++++++..+++.+.+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 8 k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 86 (330)
T PRK06139 8 AVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFG-GRID 86 (330)
T ss_pred CEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999999999888887777889999999999999999999999887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.+++++++++|+.+++.+++.++|+|.+++.|+||+++|..+..+.|+.+.|++||+++.+|
T Consensus 87 ~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~ 166 (330)
T PRK06139 87 VWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGF 166 (330)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHH
Confidence 99999998877888899999999999999999999999999999988789999999999999999999999999999999
Q ss_pred HHHHHHHHccC-CcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKD-NIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~-gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+. ||+|++|+||+++|+++.+
T Consensus 167 ~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~ 197 (330)
T PRK06139 167 SEALRGELADHPDIHVCDVYPAFMDTPGFRH 197 (330)
T ss_pred HHHHHHHhCCCCCeEEEEEecCCccCccccc
Confidence 99999999864 8999999999999998753
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=252.54 Aligned_cols=189 Identities=31% Similarity=0.430 Sum_probs=174.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|++++++.+.+++...+.++.++.+|++++++++++++++.+.+ +++|
T Consensus 7 k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 85 (254)
T PRK07478 7 KVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF-GGLD 85 (254)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999998888888887777789999999999999999999999988 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~ 158 (202)
++|||||... ..++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+. .+.++...|++||++++
T Consensus 86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~ 165 (254)
T PRK07478 86 IAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLI 165 (254)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHH
Confidence 9999999763 456778899999999999999999999999999988878999999999886 57788999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++++.|+.+.||+|++|+||+++|++.+.
T Consensus 166 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 197 (254)
T PRK07478 166 GLTQVLAAEYGAQGIRVNALLPGGTDTPMGRA 197 (254)
T ss_pred HHHHHHHHHHhhcCEEEEEEeeCcccCccccc
Confidence 99999999999999999999999999998754
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-39 Score=252.11 Aligned_cols=189 Identities=33% Similarity=0.458 Sum_probs=172.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.++..+.+|++|+++++++++++.+.+ +++|
T Consensus 10 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 88 (253)
T PRK05867 10 KRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL-GGID 88 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999998888888887767788899999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCC-C-CChhhhhhHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI-P-SVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-~-~~~~y~asK~a~ 157 (202)
++|||||.....++.+.+.++|++.+++|+.+++.+++++.|+|.+++ .++||++||..+.... + +...|+++|+++
T Consensus 89 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal 168 (253)
T PRK05867 89 IAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAV 168 (253)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHH
Confidence 999999988777888899999999999999999999999999997654 5799999998876533 3 457899999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++++.|+.++||+||+|+||+++|++...
T Consensus 169 ~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~ 201 (253)
T PRK05867 169 IHLTKAMAVELAPHKIRVNSVSPGYILTELVEP 201 (253)
T ss_pred HHHHHHHHHHHhHhCeEEEEeecCCCCCccccc
Confidence 999999999999999999999999999998754
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=253.50 Aligned_cols=189 Identities=29% Similarity=0.460 Sum_probs=176.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|+++.++...+++...+.++.++.+|++|.+++.++++++.+.+ +++|
T Consensus 7 k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id 85 (275)
T PRK05876 7 RGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL-GHVD 85 (275)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988888888887667788999999999999999999999988 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||+....++.+.+.++|+.++++|+.|++.+++.++|.|.+++ .|+||++||.++..+.++...|+++|+++.+
T Consensus 86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 165 (275)
T PRK05876 86 VVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVG 165 (275)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHHH
Confidence 999999998777888899999999999999999999999999997654 6899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|+++++.|+.++||++++|+||+++|++..+
T Consensus 166 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 196 (275)
T PRK05876 166 LAETLAREVTADGIGVSVLCPMVVETNLVAN 196 (275)
T ss_pred HHHHHHHHhhhcCcEEEEEEeCccccccccc
Confidence 9999999999899999999999999998754
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-39 Score=253.83 Aligned_cols=186 Identities=28% Similarity=0.352 Sum_probs=165.4
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChh--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++||||+ +|||+++|++|+++|++|++++|+.+ +.++..+++.+....+.++++|++|+++++++++++.+.+
T Consensus 7 k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~- 85 (258)
T PRK07370 7 KKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKW- 85 (258)
T ss_pred cEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHc-
Confidence 689999986 89999999999999999998876543 3445555555444457789999999999999999999998
Q ss_pred CCccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhh
Q 028868 77 GKLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152 (202)
Q Consensus 77 ~~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~a 152 (202)
+++|++|||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|++ .|+||++||..+..+.|+...|++
T Consensus 86 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~a 163 (258)
T PRK07370 86 GKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGGVRAIPNYNVMGV 163 (258)
T ss_pred CCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEeccccccCCcccchhhH
Confidence 79999999999763 256778899999999999999999999999999975 489999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
||+|+.+|+++|+.|++++||+||+|+||+++|++..
T Consensus 164 sKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~ 200 (258)
T PRK07370 164 AKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASS 200 (258)
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhh
Confidence 9999999999999999999999999999999999764
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-39 Score=252.54 Aligned_cols=184 Identities=24% Similarity=0.324 Sum_probs=162.4
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+++||||++ |||+++|++|+++|++|++.+|++ +.++..+++.+. +. ...+++|++|+++++++++++.+++ +
T Consensus 9 k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~~~-g 85 (260)
T PRK06603 9 KKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKEKW-G 85 (260)
T ss_pred cEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 6899999997 999999999999999999999884 334444555433 33 3467899999999999999999998 7
Q ss_pred CccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 78 KLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 78 ~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++.+.|+|++ .|+||++||..+..+.|++..|++|
T Consensus 86 ~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~as 163 (260)
T PRK06603 86 SFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGAEKVIPNYNVMGVA 163 (260)
T ss_pred CccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCccccCCCcccchhhH
Confidence 9999999999753 246778899999999999999999999999999964 5899999999998888999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+|+.+|+++++.|++++||+||+|+||+++|++..
T Consensus 164 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~ 199 (260)
T PRK06603 164 KAALEASVKYLANDMGENNIRVNAISAGPIKTLASS 199 (260)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhh
Confidence 999999999999999999999999999999999753
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-39 Score=253.37 Aligned_cols=187 Identities=22% Similarity=0.262 Sum_probs=162.7
Q ss_pred CEEEEecC--CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGa--s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++|||| ++|||+++|++|+++|++|++++|+. +..+..+++.........+++|++|+++++++++++.+++ ++
T Consensus 7 k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~ 84 (261)
T PRK08690 7 KKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW-DG 84 (261)
T ss_pred cEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh-CC
Confidence 68999997 67999999999999999999988763 3444455554433345678999999999999999999998 79
Q ss_pred ccEEEEcCCCCCCC----C-CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 79 LNILINNAAIAFVK----P-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 79 id~vi~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+|++|||||+.... + +.+.+.++|+.++++|+.+++.+++.++|+|+++ .|+||++||.++..+.|++..|+++
T Consensus 85 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~as 163 (261)
T PRK08690 85 LDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMGMA 163 (261)
T ss_pred CcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccchhH
Confidence 99999999986432 2 3457889999999999999999999999999765 4899999999999899999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|+|+.+|++.++.|+.++||+||+|+||+++|++...
T Consensus 164 Kaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~ 200 (261)
T PRK08690 164 KASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG 200 (261)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc
Confidence 9999999999999999999999999999999998653
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-39 Score=255.27 Aligned_cols=188 Identities=24% Similarity=0.324 Sum_probs=172.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh---------hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---------IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
|++|||||++|||+++|++|+++|++|++++++. +.++...+++...+.++.++.+|++|+++++++++++
T Consensus 7 k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 86 (286)
T PRK07791 7 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAA 86 (286)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHH
Confidence 6899999999999999999999999999998876 6777777777766778889999999999999999999
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC------CCeEEEecCCCCccCCC
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVRGIP 145 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~vsS~~~~~~~~ 145 (202)
.+.+ +++|++|||||+....++.+.+.++|++.+++|+.+++.++++++|+|.++. .|+||++||.++..+.+
T Consensus 87 ~~~~-g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~ 165 (286)
T PRK07791 87 VETF-GGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSV 165 (286)
T ss_pred HHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCC
Confidence 9998 7999999999988777788899999999999999999999999999997532 37999999999999999
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+...|++||+++++|+++++.|+.++||+||+|+|| ++|++...
T Consensus 166 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~ 209 (286)
T PRK07791 166 GQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTET 209 (286)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchh
Confidence 999999999999999999999999999999999999 89998653
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=249.91 Aligned_cols=189 Identities=17% Similarity=0.252 Sum_probs=171.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||++|||+++|++|+ +|++|++++|+++++++..+++.+.+. .+.++.+|++|.++++++++++.+.+ +++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 78 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEI 78 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCC
Confidence 689999999999999999999 599999999999999888888876554 47889999999999999999999988 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++|||||.....+..+.+.+++++++++|+.+.+.+++.++|.|.+++ .|+||++||.++..+.++...|+++|+++.
T Consensus 79 d~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 158 (246)
T PRK05599 79 SLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD 158 (246)
T ss_pred CEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence 9999999987555566677788899999999999999999999997654 689999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+++++.|+.++||+|++|+||+++|++....
T Consensus 159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~ 191 (246)
T PRK05599 159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM 191 (246)
T ss_pred HHHHHHHHHhcCCCceEEEecCCcccchhhcCC
Confidence 999999999999999999999999999987543
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=250.90 Aligned_cols=187 Identities=42% Similarity=0.558 Sum_probs=171.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++||||+++|||+++|++|+++|++|++++|++++++...+++...+ .++..+.+|++++++++++++...++|.+
T Consensus 9 kvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~G 88 (270)
T KOG0725|consen 9 KVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFG 88 (270)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCC
Confidence 789999999999999999999999999999999999989888876543 46999999999999999999999999448
Q ss_pred CccEEEEcCCCCCCC-CCCCCCHHHHHHHHHHHhHh-HHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC-hhhhhhH
Q 028868 78 KLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFES-VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV-SLYGAYK 154 (202)
Q Consensus 78 ~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~y~asK 154 (202)
+||++|||||..... +..+.+.++|++++++|+.| .+.+.+.+.|++++++.|.|+++||.++..+.++. ..|+++|
T Consensus 89 kidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK 168 (270)
T KOG0725|consen 89 KIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSK 168 (270)
T ss_pred CCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchhHH
Confidence 999999999987544 78999999999999999995 66677777788888789999999999999887766 7999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+++++++|+++.|+.+.|||||+|+||.+.|++
T Consensus 169 ~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 169 AALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc
Confidence 999999999999999999999999999999998
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-39 Score=256.18 Aligned_cols=188 Identities=23% Similarity=0.256 Sum_probs=165.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh----------hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ----------IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~----------~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
|+++||||++|||+++|++|+++|++|++++|+. ++++...+++...+..+.++.+|+++++++++++++
T Consensus 9 k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 88 (305)
T PRK08303 9 KVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVER 88 (305)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 6899999999999999999999999999999973 455566666666666788999999999999999999
Q ss_pred HHHHhCCCccEEEEcC-CCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc---
Q 028868 71 VTSIFQGKLNILINNA-AIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR--- 142 (202)
Q Consensus 71 ~~~~~~~~id~vi~~a-g~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--- 142 (202)
+.+.+ ++||++|||| |... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.|+||++||..+..
T Consensus 89 ~~~~~-g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~ 167 (305)
T PRK08303 89 IDREQ-GRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNAT 167 (305)
T ss_pred HHHHc-CCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCc
Confidence 99998 7999999999 7531 2566778899999999999999999999999999876679999999976543
Q ss_pred CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 143 ~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+.++...|++||+++.+|+++|+.|+++.||+||+|+||+++|+|..
T Consensus 168 ~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~ 214 (305)
T PRK08303 168 HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMML 214 (305)
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHH
Confidence 33456789999999999999999999999999999999999999864
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=250.40 Aligned_cols=186 Identities=21% Similarity=0.274 Sum_probs=162.3
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+ +|||+++|++|+++|++|++++|+.+..+ ..+++.+....+.++++|++|+++++++++++.+.+ ++
T Consensus 11 k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 88 (258)
T PRK07533 11 KRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARP-YVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEW-GR 88 (258)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHc-CC
Confidence 789999998 59999999999999999999999864322 222332221235688999999999999999999998 79
Q ss_pred ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|++|||||.... .++.+.+.++|++++++|+.+++.+++.++|+|++ .|+|+++||..+..+.+++..|+++|
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~--~g~Ii~iss~~~~~~~~~~~~Y~asK 166 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN--GGSLLTMSYYGAEKVVENYNLMGPVK 166 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc--CCEEEEEeccccccCCccchhhHHHH
Confidence 9999999997642 46678899999999999999999999999999964 58999999999988889999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+|+.+|+++++.|+.++||+||+|+||+++|++...
T Consensus 167 aal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~ 202 (258)
T PRK07533 167 AALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG 202 (258)
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc
Confidence 999999999999999999999999999999998643
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=251.20 Aligned_cols=185 Identities=17% Similarity=0.253 Sum_probs=162.4
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++ |||+++|++|+++|++|++++|+ +++....+++......+.++.+|++|+++++++++++.+.+ ++
T Consensus 7 k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 84 (262)
T PRK07984 7 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW-PK 84 (262)
T ss_pred CEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc-CC
Confidence 6899999986 99999999999999999999987 34455556665443456788999999999999999999988 78
Q ss_pred ccEEEEcCCCCCCCC-----CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 79 LNILINNAAIAFVKP-----TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 79 id~vi~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+|++|||||+....+ +.+.+.++|+..+++|+.+++.+++.+.|+|++ .|+||++||..+..+.|++..|++|
T Consensus 85 iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~iss~~~~~~~~~~~~Y~as 162 (262)
T PRK07984 85 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLA 162 (262)
T ss_pred CCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC--CcEEEEEecCCCCCCCCCcchhHHH
Confidence 999999999764322 456789999999999999999999999997753 4899999999988888999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+|+.+|+++++.|+.++|||||+|+||+++|++..
T Consensus 163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~ 198 (262)
T PRK07984 163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAAS 198 (262)
T ss_pred HHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHh
Confidence 999999999999999999999999999999998753
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=243.32 Aligned_cols=184 Identities=19% Similarity=0.207 Sum_probs=166.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|+++++++..+++...+.++..+.+|+++.++++++++++.+.+++++|
T Consensus 6 k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD 85 (227)
T PRK08862 6 SIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPD 85 (227)
T ss_pred eEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCC
Confidence 68999999999999999999999999999999999998888888776777889999999999999999999999833899
Q ss_pred EEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
++|||+|.. ...++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ .|+||++||..+. ++...|+++|+++.
T Consensus 86 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~asKaal~ 162 (227)
T PRK08862 86 VLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESSNALVS 162 (227)
T ss_pred EEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHHHHHHH
Confidence 999999854 445778889999999999999999999999999998653 6899999997643 55788999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+|+++++.|+.++||+||+|+||+++|+.
T Consensus 163 ~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 163 GFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred HHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 99999999999999999999999999984
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=249.61 Aligned_cols=184 Identities=23% Similarity=0.264 Sum_probs=163.5
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCCh---hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|+++||||+ +|||+++|++|+++|++|++++|+. +.+++..+++. +.++.++++|++|+++++++++++.+.+
T Consensus 8 k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 8 KTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 689999997 8999999999999999999998753 33444444332 4568899999999999999999999998
Q ss_pred CCCccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhh
Q 028868 76 QGKLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG 151 (202)
Q Consensus 76 ~~~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~ 151 (202)
+++|++|||||+.. ..++.+.+.++|+..+++|+.+++.+++.++|+|++ .|+||++||..+..+.+++..|+
T Consensus 86 -g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~ 162 (257)
T PRK08594 86 -GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGGERVVQNYNVMG 162 (257)
T ss_pred -CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCCccCCCCCchhH
Confidence 79999999999763 246678899999999999999999999999999965 58999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+||+|+.+|+++++.|++++||+||+|+||+++|++..
T Consensus 163 asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~ 200 (257)
T PRK08594 163 VAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAK 200 (257)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHh
Confidence 99999999999999999999999999999999999754
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=247.13 Aligned_cols=189 Identities=28% Similarity=0.420 Sum_probs=176.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+++++....+++...+.++..+.+|++|+++++++++++.+.+ +++|
T Consensus 10 k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 88 (254)
T PRK08085 10 KNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI-GPID 88 (254)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999988888888887666778889999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.++|++.+++|+.+++.+++.+.++|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 168 (254)
T PRK08085 89 VLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKML 168 (254)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHHH
Confidence 99999998777788889999999999999999999999999999877779999999999888888999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.++||++|+|+||+++|++..+
T Consensus 169 ~~~la~e~~~~gi~v~~v~pG~~~t~~~~~ 198 (254)
T PRK08085 169 TRGMCVELARHNIQVNGIAPGYFKTEMTKA 198 (254)
T ss_pred HHHHHHHHHhhCeEEEEEEeCCCCCcchhh
Confidence 999999999999999999999999998764
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=245.50 Aligned_cols=190 Identities=33% Similarity=0.421 Sum_probs=176.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+.++++...+++.+.+.++.++++|++++++++++++++.+.+ +++|
T Consensus 3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 81 (256)
T PRK08643 3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTF-GDLN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988888888887667788999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.+++++++++|+.+++.+++.+++.|++.+ .++||++||..+..+.++...|+++|++++.
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 161 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG 161 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence 999999987777788889999999999999999999999999997653 5799999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++.++.|+.++||+|++|+||+++|+++...
T Consensus 162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~ 193 (256)
T PRK08643 162 LTQTAARDLASEGITVNAYAPGIVKTPMMFDI 193 (256)
T ss_pred HHHHHHHHhcccCcEEEEEeeCCCcChhhhHH
Confidence 99999999999999999999999999987643
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=250.35 Aligned_cols=185 Identities=21% Similarity=0.297 Sum_probs=161.4
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+ +|||+++|++|+++|++|++++|++. ..+..+++.+.-.....+++|++|+++++++++++.+++ ++
T Consensus 11 k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 88 (272)
T PRK08159 11 KRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW-GK 88 (272)
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc-CC
Confidence 689999997 89999999999999999999988742 223333333221235678999999999999999999998 79
Q ss_pred ccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|++|||||+.. ..++.+.+.++|+..+++|+.+++.+++.++|+|++ .|+||++||.++..+.|++..|++||
T Consensus 89 iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~~~~~p~~~~Y~asK 166 (272)
T PRK08159 89 LDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGAEKVMPHYNVMGVAK 166 (272)
T ss_pred CcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCcchhhhhHH
Confidence 999999999864 246678899999999999999999999999999964 48999999998888899999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+|+.+|+++|+.|+.++||+||+|+||+++|++..
T Consensus 167 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~ 201 (272)
T PRK08159 167 AALEASVKYLAVDLGPKNIRVNAISAGPIKTLAAS 201 (272)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHh
Confidence 99999999999999999999999999999998753
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=246.47 Aligned_cols=188 Identities=28% Similarity=0.368 Sum_probs=171.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||++|||+++|++|+++|++|++++|+.+ .++...+++...+.++..+.+|++|+++++++++++.+.+ +++
T Consensus 9 k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~i 87 (254)
T PRK06114 9 QVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAEL-GAL 87 (254)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999764 4566667776666778899999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCC--ChhhhhhHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS--VSLYGAYKGAM 157 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--~~~y~asK~a~ 157 (202)
|++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++.++||++||.++..+.++ ...|+++|+++
T Consensus 88 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~ 167 (254)
T PRK06114 88 TLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGV 167 (254)
T ss_pred CEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHH
Confidence 9999999988777788899999999999999999999999999998777899999999988876553 68999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++++++++.|+.++||+||.|+||+++|++..
T Consensus 168 ~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~ 199 (254)
T PRK06114 168 IHLSKSLAMEWVGRGIRVNSISPGYTATPMNT 199 (254)
T ss_pred HHHHHHHHHHHhhcCeEEEEEeecCccCcccc
Confidence 99999999999999999999999999999864
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=248.30 Aligned_cols=190 Identities=26% Similarity=0.356 Sum_probs=170.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||+++|++|+++|++|++++| +++.++...+++... +.++.++.+|++|+++++++++++.+.+ ++
T Consensus 9 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~ 87 (260)
T PRK08416 9 KTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF-DR 87 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc-CC
Confidence 78999999999999999999999999998865 566666666666543 5678999999999999999999999998 78
Q ss_pred ccEEEEcCCCCC------CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhh
Q 028868 79 LNILINNAAIAF------VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152 (202)
Q Consensus 79 id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~a 152 (202)
+|++|||||... ..++.+.+.++++..+++|+.+++.+++.++|.|.+++.++||++||..+..+.|++..|++
T Consensus 88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 167 (260)
T PRK08416 88 VDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGT 167 (260)
T ss_pred ccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccchh
Confidence 999999998642 24566788999999999999999999999999998877789999999999888899999999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
||++++.++++++.|+.++||+|++|+||+++|++...+
T Consensus 168 sK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~ 206 (260)
T PRK08416 168 SKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAF 206 (260)
T ss_pred hHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhc
Confidence 999999999999999999999999999999999986543
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=247.44 Aligned_cols=185 Identities=21% Similarity=0.247 Sum_probs=156.9
Q ss_pred CEEEEecC--CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGa--s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++|||| ++|||+++|++|+++|++|++++|... ..+..+++.+.......+.+|++|+++++++++++.+++ ++
T Consensus 7 k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~ 84 (260)
T PRK06997 7 KRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDR-FKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW-DG 84 (260)
T ss_pred cEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchH-HHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh-CC
Confidence 68999996 689999999999999999999876422 122222222221223568899999999999999999998 79
Q ss_pred ccEEEEcCCCCCCC----C-CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 79 LNILINNAAIAFVK----P-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 79 id~vi~~ag~~~~~----~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+|++|||||..... + +.+.+.++|+..+++|+.+++.++++++|+|++ .|+||++||.++..+.++...|++|
T Consensus 85 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~--~g~Ii~iss~~~~~~~~~~~~Y~as 162 (260)
T PRK06997 85 LDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERVVPNYNTMGLA 162 (260)
T ss_pred CcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC--CceEEEEeccccccCCCCcchHHHH
Confidence 99999999986432 2 345788999999999999999999999999953 4899999999998888999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+|+.+++++++.|++++||+||+|+||+++|++..
T Consensus 163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~ 198 (260)
T PRK06997 163 KASLEASVRYLAVSLGPKGIRANGISAGPIKTLAAS 198 (260)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhc
Confidence 999999999999999999999999999999998754
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=245.75 Aligned_cols=188 Identities=35% Similarity=0.454 Sum_probs=173.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+ ++.++..+.+...+.++.++.+|+++.++++++++++.+.+ +++|
T Consensus 16 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~id 93 (258)
T PRK06935 16 KVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF-GKID 93 (258)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999998 55666666665556678999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||+|.....++.+.+.++|+..+++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus 94 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 173 (258)
T PRK06935 94 ILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGL 173 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHH
Confidence 99999998776778888999999999999999999999999999887779999999999998989999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+.||+||.|+||+++|++...
T Consensus 174 ~~~la~e~~~~gi~v~~i~PG~v~t~~~~~ 203 (258)
T PRK06935 174 TKAFANELAAYNIQVNAIAPGYIKTANTAP 203 (258)
T ss_pred HHHHHHHhhhhCeEEEEEEeccccccchhh
Confidence 999999999999999999999999998653
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-38 Score=245.42 Aligned_cols=187 Identities=26% Similarity=0.310 Sum_probs=170.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|+++++++..+++.+.+ ++.++.+|++|.++++++++++.+.+ +++|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~-g~id 78 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELL-GGID 78 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999988888888876544 68889999999999999999999988 7899
Q ss_pred EEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHh-cCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
++|||||... ..++.+.+.++|.+.+++|+.+++.+++.++|.|. +++.|+||++||.++..+.++...|+++|+++
T Consensus 79 ~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~ 158 (259)
T PRK08340 79 ALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGL 158 (259)
T ss_pred EEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHH
Confidence 9999999753 33567788899999999999999999999999876 44578999999999999989999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.+++++++.|+.++||+||+|+||+++|++.+
T Consensus 159 ~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~ 190 (259)
T PRK08340 159 VQLAKGVSRTYGGKGIRAYTVLLGSFDTPGAR 190 (259)
T ss_pred HHHHHHHHHHhCCCCEEEEEeccCcccCccHH
Confidence 99999999999999999999999999999875
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-38 Score=250.88 Aligned_cols=187 Identities=22% Similarity=0.320 Sum_probs=173.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|++++++...+++.. +..+..+.+|++|.++++++++++.+.+ +++|
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id 87 (296)
T PRK05872 10 KVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVERF-GGID 87 (296)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999999999999888887777643 4567788899999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.|++.+++.++|+|.++ .|+||++||.++..+.++...|++||++++.+
T Consensus 88 ~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~ 166 (296)
T PRK05872 88 VVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGVEAF 166 (296)
T ss_pred EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHHHHHHH
Confidence 99999999877788889999999999999999999999999999764 58999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.++||+|++++||+++|++..+
T Consensus 167 ~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~ 196 (296)
T PRK05872 167 ANALRLEVAHHGVTVGSAYLSWIDTDLVRD 196 (296)
T ss_pred HHHHHHHHHHHCcEEEEEecCcccchhhhh
Confidence 999999999999999999999999998765
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=252.22 Aligned_cols=186 Identities=22% Similarity=0.242 Sum_probs=161.8
Q ss_pred CEEEEecC--CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc----------C---CeEEEEEecC--CC---
Q 028868 1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK----------G---FKVTGSVCDL--SS--- 60 (202)
Q Consensus 1 k~~lItGa--s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~----------~---~~v~~~~~Dv--~~--- 60 (202)
|++||||| ++|||+++|+.|+++|++|++ +|+.++++....++... + .....+.+|+ ++
T Consensus 10 k~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 88 (303)
T PLN02730 10 KRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPED 88 (303)
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCcccc
Confidence 78999999 899999999999999999999 78888777776655421 1 1146788898 33
Q ss_pred ---------------HHHHHHHHHHHHHHhCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHH
Q 028868 61 ---------------REQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123 (202)
Q Consensus 61 ---------------~~~i~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 123 (202)
.++++++++++.+.+ +++|++|||||... ..++.+.+.++|++++++|+.+++.+++.++|+
T Consensus 89 ~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~-G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~ 167 (303)
T PLN02730 89 VPEDVKTNKRYAGSSNWTVQEVAESVKADF-GSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPI 167 (303)
T ss_pred CchhhhcccccccCCHHHHHHHHHHHHHHc-CCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 348999999999998 79999999998542 367888999999999999999999999999999
Q ss_pred HhcCCCCeEEEecCCCCccCCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCcEEEEeeCCcccCCCccc
Q 028868 124 FKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 124 ~~~~~~~~iv~vsS~~~~~~~~~~-~~y~asK~a~~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~ 190 (202)
|+++ |+||++||.++..+.|++ ..|++||+++.+|+++|+.|+++ +|||||+|+||+++|+|...
T Consensus 168 m~~~--G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~ 234 (303)
T PLN02730 168 MNPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA 234 (303)
T ss_pred HhcC--CEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc
Confidence 9763 899999999998888866 48999999999999999999986 79999999999999999764
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=243.61 Aligned_cols=188 Identities=30% Similarity=0.333 Sum_probs=168.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH----h
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI----F 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~----~ 75 (202)
|+++||||++|||+++|++|+++|++|++.. ++.++.+....++...+..+..+.+|+++.+++..+++++.+. +
T Consensus 5 k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK12747 5 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT 84 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhc
Confidence 6899999999999999999999999999875 6667777777777666667888999999999999998887753 3
Q ss_pred C-CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 76 Q-GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 76 ~-~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+ +++|++|||||.....++.+.+.++|++++++|+.+++.++++++|.|++ .|+||++||.++..+.++...|++||
T Consensus 85 g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (252)
T PRK12747 85 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTK 162 (252)
T ss_pred CCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCcccccCCCCchhHHHHH
Confidence 2 37999999999876667788899999999999999999999999999975 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++++++.|+.++||+||+|+||+|+|++..+
T Consensus 163 aa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~ 198 (252)
T PRK12747 163 GAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAE 198 (252)
T ss_pred HHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhh
Confidence 999999999999999999999999999999998754
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=244.41 Aligned_cols=190 Identities=32% Similarity=0.501 Sum_probs=177.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|++++++...+.+...+.++.++++|++++++++++++++.+.+ +++|
T Consensus 11 k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 89 (265)
T PRK07097 11 KIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV-GVID 89 (265)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence 689999999999999999999999999999999988888888877667789999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||+|.....++.+.+.+++++++++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus 90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l 169 (265)
T PRK07097 90 ILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKML 169 (265)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHH
Confidence 99999999877788889999999999999999999999999999887789999999998888888899999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.++.++||+|++|+||+++|++..+.
T Consensus 170 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 200 (265)
T PRK07097 170 TKNIASEYGEANIQCNGIGPGYIATPQTAPL 200 (265)
T ss_pred HHHHHHHhhhcCceEEEEEeccccccchhhh
Confidence 9999999999999999999999999987543
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=242.16 Aligned_cols=189 Identities=32% Similarity=0.377 Sum_probs=175.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+.++++...+++.+.+.++.++++|+++.++++++++++.+.+ +++|
T Consensus 9 k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 87 (252)
T PRK07035 9 KIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-GRLD 87 (252)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988888888887767778899999999999999999999998 7899
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++||++|... ..++.+.+.++++..+++|+.+++.++++++|+|++++.++|+++||..+..+.++.+.|++||+++++
T Consensus 88 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~ 167 (252)
T PRK07035 88 ILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVIS 167 (252)
T ss_pred EEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHHH
Confidence 9999999753 456777899999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+.++||+|++|+||+++|++...
T Consensus 168 ~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~ 198 (252)
T PRK07035 168 MTKAFAKECAPFGIRVNALLPGLTDTKFASA 198 (252)
T ss_pred HHHHHHHHHhhcCEEEEEEeeccccCccccc
Confidence 9999999999999999999999999998654
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-37 Score=242.61 Aligned_cols=190 Identities=33% Similarity=0.464 Sum_probs=176.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||.+++++|+++|++|++++|++++++...+++...+.++.++.+|+++.+++.++++++.+.+ +++|
T Consensus 8 k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-g~id 86 (253)
T PRK06172 8 KVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY-GRLD 86 (253)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999988888888887767789999999999999999999999988 7999
Q ss_pred EEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++||++|.... .++.+.+.++|++.+++|+.+++.++++++|.|.+++.+++|++||..+..+.++...|+++|+++++
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~ 166 (253)
T PRK06172 87 YAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIG 166 (253)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHH
Confidence 99999998643 34677899999999999999999999999999987777899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++.|+.++||+|++|+||+++|+++.+.
T Consensus 167 ~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~ 198 (253)
T PRK06172 167 LTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRA 198 (253)
T ss_pred HHHHHHHHhcccCeEEEEEEeCCccChhhhhh
Confidence 99999999999999999999999999998754
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=242.62 Aligned_cols=187 Identities=29% Similarity=0.397 Sum_probs=168.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++++. ..+..+.+...+.++..+.+|++|.++++++++++.+.+ +++|
T Consensus 11 k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~D 87 (253)
T PRK08993 11 KVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEF-GHID 87 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 6899999999999999999999999999887754 234444554456678899999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .|+||++||..+..+.++...|+++|+++++
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 167 (253)
T PRK08993 88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMG 167 (253)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHH
Confidence 999999987767788889999999999999999999999999997653 5899999999999988888999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+.+.||+||.|+||+++|++...
T Consensus 168 ~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~ 198 (253)
T PRK08993 168 VTRLMANEWAKHNINVNAIAPGYMATNNTQQ 198 (253)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCcccCcchhh
Confidence 9999999999999999999999999998754
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-37 Score=241.76 Aligned_cols=189 Identities=30% Similarity=0.308 Sum_probs=170.1
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCC-----------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRN-----------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~ 67 (202)
|+++||||+ +|||+++|++|+++|++|++++|+ .++.....+++.+.+.++.++.+|+++.++++++
T Consensus 7 k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~ 86 (256)
T PRK12859 7 KVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKEL 86 (256)
T ss_pred cEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 689999999 499999999999999999987542 2334445556666677899999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC
Q 028868 68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV 147 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~ 147 (202)
++++.+.+ +++|++|||||.....++.+.+.++|++.+++|+.+++.+.+.++|.|++++.|+||++||..+..+.++.
T Consensus 87 ~~~~~~~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 165 (256)
T PRK12859 87 LNKVTEQL-GYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGE 165 (256)
T ss_pred HHHHHHHc-CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCCc
Confidence 99999988 68999999999877778889999999999999999999999999999987778999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
..|+++|+++++|+++++.++.++||+|++|+||+++|++..+
T Consensus 166 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~ 208 (256)
T PRK12859 166 LAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE 208 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH
Confidence 9999999999999999999999999999999999999997543
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=242.81 Aligned_cols=184 Identities=29% Similarity=0.343 Sum_probs=167.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++++|++++++++++++.+.+.+ +++|
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 82 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVARF-GRVD 82 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence 68999999999999999999999999999999987777666554 4568899999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....+ .+.+.++|++.+++|+.+++.+++.++|.|. ++.|+||++||.++..+.++...|+++|+++..+
T Consensus 83 ~lv~~ag~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~ 160 (261)
T PRK08265 83 ILVNLACTYLDDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQL 160 (261)
T ss_pred EEEECCCCCCCCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhhccCCCCCchhHHHHHHHHHH
Confidence 9999999764433 3568899999999999999999999999997 5578999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.|+.++||++|+|+||+++|++...
T Consensus 161 ~~~la~e~~~~gi~vn~v~PG~~~t~~~~~ 190 (261)
T PRK08265 161 TRSMAMDLAPDGIRVNSVSPGWTWSRVMDE 190 (261)
T ss_pred HHHHHHHhcccCEEEEEEccCCccChhhhh
Confidence 999999999999999999999999998754
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=244.63 Aligned_cols=177 Identities=29% Similarity=0.396 Sum_probs=164.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.. .++.++++|++|+++++++++++.+++ +++|
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~id 74 (258)
T PRK06398 7 KVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY-GRID 74 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999999999986432 157889999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.|++.++++++|+|.+++.++||++||..+..+.++...|+++|++++++
T Consensus 75 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~ 154 (258)
T PRK06398 75 ILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGL 154 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHH
Confidence 99999998877788889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+. |+||+|+||+++|++...
T Consensus 155 ~~~la~e~~~~-i~vn~i~PG~v~T~~~~~ 183 (258)
T PRK06398 155 TRSIAVDYAPT-IRCVAVCPGSIRTPLLEW 183 (258)
T ss_pred HHHHHHHhCCC-CEEEEEecCCccchHHhh
Confidence 99999999875 999999999999998754
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=244.35 Aligned_cols=183 Identities=22% Similarity=0.173 Sum_probs=159.4
Q ss_pred CEEEEecC--CCchHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGa--s~giG~a~a~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++|||| ++|||+++|++|+++|++|++++|+. +.+++..+++ +..+.++++|++|+++++++++++.+.+
T Consensus 8 k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~~~~~~~- 83 (256)
T PRK07889 8 KRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLADRVREHV- 83 (256)
T ss_pred CEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHHHHHHHc-
Confidence 68999999 89999999999999999999998764 3344444433 2357789999999999999999999988
Q ss_pred CCccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhh
Q 028868 77 GKLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152 (202)
Q Consensus 77 ~~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~a 152 (202)
+++|++|||||+... .++.+.+.++|++.+++|+.+++.+++.++|+|++ .|+||++++. +..+.|.+..|++
T Consensus 84 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~-~~~~~~~~~~Y~a 160 (256)
T PRK07889 84 DGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFD-ATVAWPAYDWMGV 160 (256)
T ss_pred CCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeec-ccccCCccchhHH
Confidence 799999999998643 35667889999999999999999999999999974 4899999875 4566778889999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
||+++.+|+++++.|+.++||+||+|+||+++|++.+.
T Consensus 161 sKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~ 198 (256)
T PRK07889 161 AKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA 198 (256)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc
Confidence 99999999999999999999999999999999998653
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-37 Score=240.72 Aligned_cols=189 Identities=38% Similarity=0.566 Sum_probs=176.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||++++++|+++|++|++++|+.+.+++..+++... +.++.++.+|++++++++++++++.+.+ ++
T Consensus 10 k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~ 88 (257)
T PRK09242 10 QTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW-DG 88 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence 68999999999999999999999999999999998888887777654 5678999999999999999999999998 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++||++|.....+..+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++.+.|+++|++++
T Consensus 89 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~ 168 (257)
T PRK09242 89 LHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALL 168 (257)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHHH
Confidence 99999999987666777889999999999999999999999999998877799999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++++.|+.+.||++++|+||+++|++..+
T Consensus 169 ~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~ 200 (257)
T PRK09242 169 QMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSG 200 (257)
T ss_pred HHHHHHHHHHHHhCeEEEEEEECCCCCccccc
Confidence 99999999999899999999999999998754
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=245.28 Aligned_cols=184 Identities=24% Similarity=0.294 Sum_probs=169.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||+++|++|+++|++|++++|+++.++.+. .. .+.++.+|++|.++++++++++.+.+++++|
T Consensus 5 k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 5 RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----AE--GLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HC--CceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 58999999999999999999999999999999987765443 22 3678899999999999999999887656899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++++..+++|+.|++.+++.++|.|.+++.++||++||..+..+.++.+.|++||++++++
T Consensus 79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 158 (277)
T PRK05993 79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGL 158 (277)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999988789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+.||+|++|+||+++|++..+
T Consensus 159 ~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~ 188 (277)
T PRK05993 159 SLTLRMELQGSGIHVSLIEPGPIETRFRAN 188 (277)
T ss_pred HHHHHHHhhhhCCEEEEEecCCccCchhhH
Confidence 999999999999999999999999998764
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=243.24 Aligned_cols=189 Identities=30% Similarity=0.346 Sum_probs=173.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+.+.++...+++.+.+.++.++.+|+++++++.++++++.+.+ +++|
T Consensus 11 k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~id 89 (278)
T PRK08277 11 KVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDF-GPCD 89 (278)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999888888888877666789999999999999999999999988 7999
Q ss_pred EEEEcCCCCCC---------------CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC
Q 028868 81 ILINNAAIAFV---------------KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP 145 (202)
Q Consensus 81 ~vi~~ag~~~~---------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 145 (202)
++|||||.... .++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+.+
T Consensus 90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~ 169 (278)
T PRK08277 90 ILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLT 169 (278)
T ss_pred EEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCC
Confidence 99999996532 245678899999999999999999999999999877779999999999999999
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+...|+++|++++.++++++.|+.+.||+||+|+||+++|++.+.
T Consensus 170 ~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~ 214 (278)
T PRK08277 170 KVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRA 214 (278)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhh
Confidence 999999999999999999999999999999999999999998654
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=240.62 Aligned_cols=189 Identities=33% Similarity=0.490 Sum_probs=177.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+++||++++++|+++|++|++++|++++++...+.+...+.++..+.+|++|+++++++++.+.+.+ +++|
T Consensus 11 k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 89 (255)
T PRK07523 11 RRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI-GPID 89 (255)
T ss_pred CEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999988888877777666778999999999999999999999988 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.++|++++++|+.+++.+++.+.+.|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus 90 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~ 169 (255)
T PRK07523 90 ILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNL 169 (255)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999887789999999999988999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.|+.++||+|++|+||+++|++...
T Consensus 170 ~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~ 199 (255)
T PRK07523 170 TKGMATDWAKHGLQCNAIAPGYFDTPLNAA 199 (255)
T ss_pred HHHHHHHhhHhCeEEEEEEECcccCchhhh
Confidence 999999999999999999999999998653
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=249.20 Aligned_cols=189 Identities=26% Similarity=0.372 Sum_probs=177.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|++++++...+++.+.+.++.++.+|++|.++++++++.+.+++ +++|
T Consensus 9 k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~-g~iD 87 (334)
T PRK07109 9 QVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL-GPID 87 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC-CCCC
Confidence 689999999999999999999999999999999999988888887777889999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||+|.....++.+.+.++++..+++|+.|++.+++.++|+|.+++.++||++||..+..+.|....|+++|+++.+|
T Consensus 88 ~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~ 167 (334)
T PRK07109 88 TWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGF 167 (334)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHH
Confidence 99999998777788889999999999999999999999999999987779999999999999999999999999999999
Q ss_pred HHHHHHHHcc--CCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAK--DNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.. .+|+++.|+||+++||++..
T Consensus 168 ~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~ 199 (334)
T PRK07109 168 TDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW 199 (334)
T ss_pred HHHHHHHHhhcCCCeEEEEEeCCCccCchhhh
Confidence 9999999964 47999999999999998753
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=248.95 Aligned_cols=187 Identities=24% Similarity=0.322 Sum_probs=162.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQ-G 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~ 77 (202)
|+++||||++|||+++|++|+++|++|++++|++++++...+++.+. +.++..+.+|+++ ++.+.++++.+.++ .
T Consensus 54 ~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 54 SWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIEGL 131 (320)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhcCC
Confidence 57999999999999999999999999999999999999888888654 3468888999995 33344444444442 2
Q ss_pred CccEEEEcCCCCCC--CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-C-CCCChhhhhh
Q 028868 78 KLNILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-G-IPSVSLYGAY 153 (202)
Q Consensus 78 ~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~-~~~~~~y~as 153 (202)
++|++|||||.... .++.+.+.++++.++++|+.|++.+++.++|.|.+++.|+||++||.++.. + .|+.+.|++|
T Consensus 132 didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aS 211 (320)
T PLN02780 132 DVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAAT 211 (320)
T ss_pred CccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHH
Confidence 57799999998643 457788999999999999999999999999999887789999999998864 3 5788999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+++++|+++++.|+.++||+|++|+||+++|+|..
T Consensus 212 Kaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~ 247 (320)
T PLN02780 212 KAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS 247 (320)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc
Confidence 999999999999999999999999999999999876
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-37 Score=240.86 Aligned_cols=190 Identities=25% Similarity=0.341 Sum_probs=178.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++++++++++++.+.+.+ +++|
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id 79 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKW-GGID 79 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999998888888887777789999999999999999999999887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||+|.....++.+.+.+++++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++.+.|+++|++++++
T Consensus 80 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (270)
T PRK05650 80 VIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL 159 (270)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence 99999999877788889999999999999999999999999999887778999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+.+.||+++.|+||+++|++....
T Consensus 160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~ 190 (270)
T PRK05650 160 SETLLVELADDEIGVHVVCPSFFQTNLLDSF 190 (270)
T ss_pred HHHHHHHhcccCcEEEEEecCccccCccccc
Confidence 9999999998999999999999999987654
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=239.39 Aligned_cols=188 Identities=27% Similarity=0.332 Sum_probs=170.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||.+++++|+++|++|++++|+.++++...+++...+ ++.++.+|++|.+++.++++++.+.+ +++|
T Consensus 3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~id 80 (257)
T PRK07024 3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAH-GLPD 80 (257)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence 689999999999999999999999999999999888877766664433 78999999999999999999999887 6899
Q ss_pred EEEEcCCCCCCCCCC-CCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||+|........ +.+.++++.++++|+.|++.+++.++|.|.+++.++||++||.++..+.+....|++||++++.
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 160 (257)
T PRK07024 81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK 160 (257)
T ss_pred EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence 999999976433333 3688999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+.+.||++++|+||+++|++...
T Consensus 161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (257)
T PRK07024 161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAH 191 (257)
T ss_pred HHHHHHHHhhccCcEEEEEecCCCcCchhhc
Confidence 9999999999899999999999999998653
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-37 Score=243.64 Aligned_cols=185 Identities=30% Similarity=0.312 Sum_probs=166.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|+. +..+.+.+.+...+.++.++.+|+++.++++++++++.+.+ ++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~ 128 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL-GG 128 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence 6899999999999999999999999999988653 34555555555556678899999999999999999999988 79
Q ss_pred ccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|++|||||.. ...++.+.+.++|++++++|+.+++.++++++|+|++ .++||++||..+..+.++...|+++|+++
T Consensus 129 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~~~~~~~~~Y~asKaal 206 (294)
T PRK07985 129 LDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAI 206 (294)
T ss_pred CCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhccCCCCcchhHHHHHHH
Confidence 99999999975 3456778899999999999999999999999999965 47999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
++++++++.|++++||+||+|+||+++|++.
T Consensus 207 ~~l~~~la~el~~~gIrvn~i~PG~v~t~~~ 237 (294)
T PRK07985 207 LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ 237 (294)
T ss_pred HHHHHHHHHHHhHhCcEEEEEECCcCccccc
Confidence 9999999999999999999999999999985
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-36 Score=237.63 Aligned_cols=188 Identities=31% Similarity=0.418 Sum_probs=173.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+.+..+....++...+.++.++.+|+++.+++.++++.+.+.+ +++|
T Consensus 12 k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~~d 90 (255)
T PRK06113 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL-GKVD 90 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999888888777776667788899999999999999999998887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++ +.+.++|+..+++|+.+++.++++++|+|.+.+.++||++||.++..+.++...|+++|++++++
T Consensus 91 ~li~~ag~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 169 (255)
T PRK06113 91 ILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL 169 (255)
T ss_pred EEEECCCCCCCCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence 99999998655444 67899999999999999999999999999876678999999999999998999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.++.+.||+||.|+||+++|+++..
T Consensus 170 ~~~la~~~~~~~i~v~~v~pg~~~t~~~~~ 199 (255)
T PRK06113 170 VRNMAFDLGEKNIRVNGIAPGAILTDALKS 199 (255)
T ss_pred HHHHHHHhhhhCeEEEEEeccccccccccc
Confidence 999999999999999999999999998764
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=237.52 Aligned_cols=185 Identities=27% Similarity=0.386 Sum_probs=169.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++++++++++++++.+.+ +++|
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 80 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKF-GRID 80 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Confidence 789999999999999999999999999999999988888877776556678999999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||+|.....++.+.+.++|++++++|+.+++.++++++|+|.++ ..++||++||..+..+.++...|+++|+++++
T Consensus 81 ~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~ 160 (252)
T PRK07677 81 ALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA 160 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHH
Confidence 99999997666677888999999999999999999999999998654 36899999999998888888999999999999
Q ss_pred HHHHHHHHHcc-CCcEEEEeeCCcccCC
Q 028868 160 LTKNLACEWAK-DNIRTNTVAPWVIKTS 186 (202)
Q Consensus 160 ~~~~la~e~~~-~gi~v~~v~pG~v~t~ 186 (202)
|+++|+.|+.+ .||++++|+||+++|+
T Consensus 161 ~~~~la~e~~~~~gi~v~~v~PG~v~~~ 188 (252)
T PRK07677 161 MTRTLAVEWGRKYGIRVNAIAPGPIERT 188 (252)
T ss_pred HHHHHHHHhCcccCeEEEEEeecccccc
Confidence 99999999964 6999999999999964
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=241.76 Aligned_cols=187 Identities=26% Similarity=0.332 Sum_probs=169.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+.+..+...+++. .+.++.++++|++|.++++++++.+.+.+ +++|
T Consensus 19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-g~id 96 (280)
T PLN02253 19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDFTVDKF-GTLD 96 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999877777666653 24568899999999999999999999998 7899
Q ss_pred EEEEcCCCCCC--CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
++|||||.... .++.+.+.++|+.++++|+.|++.+++++.|.|.+++.|+|++++|..+..+.++...|+++|++++
T Consensus 97 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 176 (280)
T PLN02253 97 IMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVL 176 (280)
T ss_pred EEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHH
Confidence 99999997632 3567889999999999999999999999999998766789999999999888888889999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.++++++.|++++||+|++++||+++|++..
T Consensus 177 ~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~ 207 (280)
T PLN02253 177 GLTRSVAAELGKHGIRVNCVSPYAVPTALAL 207 (280)
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCcccccccc
Confidence 9999999999999999999999999999754
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=237.45 Aligned_cols=187 Identities=32% Similarity=0.425 Sum_probs=168.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|++ ..+..+.+...+.++.++.+|+++.+++.++++++.+.+ +++|
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 82 (248)
T TIGR01832 6 KVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEF-GHID 82 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 7899999999999999999999999999999975 234444454556678999999999999999999998887 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+..+.++...|+++|+++++
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~ 162 (248)
T TIGR01832 83 ILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAG 162 (248)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHH
Confidence 999999987767777889999999999999999999999999997654 6899999999988888888999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+.++||+|++|+||+++|++...
T Consensus 163 ~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~ 193 (248)
T TIGR01832 163 LTKLLANEWAAKGINVNAIAPGYMATNNTQA 193 (248)
T ss_pred HHHHHHHHhCccCcEEEEEEECcCcCcchhc
Confidence 9999999999999999999999999998654
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=237.84 Aligned_cols=189 Identities=30% Similarity=0.395 Sum_probs=172.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+++||+++|++|+++|++|++++|+ ++..+...+++...+.++.++.+|++|.+++.++++.+.+.+ +++
T Consensus 8 k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-g~i 86 (261)
T PRK08936 8 KVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEF-GTL 86 (261)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999998885 445666666776667788899999999999999999999988 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++||++|.....++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .++||++||..+..+.++...|+++|++++
T Consensus 87 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~ 166 (261)
T PRK08936 87 DVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVK 166 (261)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHH
Confidence 9999999987777788889999999999999999999999999998754 589999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.+++.++.++.+.||+|++|+||+++|++...
T Consensus 167 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~ 198 (261)
T PRK08936 167 LMTETLAMEYAPKGIRVNNIGPGAINTPINAE 198 (261)
T ss_pred HHHHHHHHHHhhcCeEEEEEEECcCCCCcccc
Confidence 99999999999999999999999999998653
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-37 Score=237.63 Aligned_cols=186 Identities=23% Similarity=0.294 Sum_probs=172.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-Cc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~i 79 (202)
|.|+|||+.+|.|+.+|++|.++|++|++.+-+++..+....+.. +.+...+++|++++++|+++...++++.+. .+
T Consensus 30 k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL 107 (322)
T KOG1610|consen 30 KAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL 107 (322)
T ss_pred cEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence 679999999999999999999999999999988877777776654 567888899999999999999999998743 49
Q ss_pred cEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
..||||||++ ..++.+..+.+++++.+++|+.|++.++++++|+++++ .||||++||..|..+.|..++|++||+|++
T Consensus 108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a-rGRvVnvsS~~GR~~~p~~g~Y~~SK~aVe 186 (322)
T KOG1610|consen 108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA-RGRVVNVSSVLGRVALPALGPYCVSKFAVE 186 (322)
T ss_pred eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc-cCeEEEecccccCccCcccccchhhHHHHH
Confidence 9999999976 66788899999999999999999999999999999987 689999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.|+-++++|+.+.||.|..|.||.++|++..
T Consensus 187 af~D~lR~EL~~fGV~VsiiePG~f~T~l~~ 217 (322)
T KOG1610|consen 187 AFSDSLRRELRPFGVKVSIIEPGFFKTNLAN 217 (322)
T ss_pred HHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence 9999999999999999999999999999986
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=239.97 Aligned_cols=186 Identities=26% Similarity=0.358 Sum_probs=173.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||++++++|+++|++|++++|++++++...+++. ++.++.+|++|.++++++++.+.+.+ +++|
T Consensus 6 ~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 80 (273)
T PRK07825 6 KVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADL-GPID 80 (273)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988877666553 47788999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.+++++++++|+.|++.+++.++|.|.+++.++||++||.++..+.++...|+++|+++..+
T Consensus 81 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 160 (273)
T PRK07825 81 VLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGF 160 (273)
T ss_pred EEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHH
Confidence 99999999877788888999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+.+.||+++.|+||+++|++....
T Consensus 161 ~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~ 191 (273)
T PRK07825 161 TDAARLELRGTGVHVSVVLPSFVNTELIAGT 191 (273)
T ss_pred HHHHHHHhhccCcEEEEEeCCcCcchhhccc
Confidence 9999999999999999999999999987643
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=242.89 Aligned_cols=186 Identities=30% Similarity=0.347 Sum_probs=167.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|+++.++.+ ..+...+.+...+.++.++.+|+++.++++++++++.+.+ ++
T Consensus 56 k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 134 (300)
T PRK06128 56 RKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL-GG 134 (300)
T ss_pred CEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh-CC
Confidence 68999999999999999999999999999887543 3455566666667788999999999999999999999988 78
Q ss_pred ccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|++|||||.. ...++.+.+.++|+.++++|+.|++.++++++|+|++ .++||++||..+..+.++...|++||+++
T Consensus 135 iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~asK~a~ 212 (300)
T PRK06128 135 LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSYQPSPTLLDYASTKAAI 212 (300)
T ss_pred CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCccccCCCCCchhHHHHHHHH
Confidence 99999999975 3456778899999999999999999999999999965 47999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+.|+++++.++.++||+||+|+||+++|++..
T Consensus 213 ~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~ 244 (300)
T PRK06128 213 VAFTKALAKQVAEKGIRVNAVAPGPVWTPLQP 244 (300)
T ss_pred HHHHHHHHHHhhhcCcEEEEEEECcCcCCCcc
Confidence 99999999999999999999999999999864
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-37 Score=238.66 Aligned_cols=183 Identities=34% Similarity=0.475 Sum_probs=162.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++++.+... +++... ++.++.+|++|+++++++++++.+.+ +++|
T Consensus 8 k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~---~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 81 (255)
T PRK06463 8 KVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEA---KELREK--GVFTIKCDVGNRDQVKKSKEVVEKEF-GRVD 81 (255)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999998877654322 222222 47788999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-CCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+.. +.++...|++||+++++
T Consensus 82 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~ 161 (255)
T PRK06463 82 VLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIII 161 (255)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHH
Confidence 99999998766778888999999999999999999999999999877789999999988775 45677889999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++++++.|+.+.||+|+.|+||+++|++..
T Consensus 162 ~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~ 191 (255)
T PRK06463 162 LTRRLAFELGKYGIRVNAVAPGWVETDMTL 191 (255)
T ss_pred HHHHHHHHhhhcCeEEEEEeeCCCCCchhh
Confidence 999999999999999999999999999874
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=236.75 Aligned_cols=189 Identities=26% Similarity=0.339 Sum_probs=172.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||++|||++++++|+++|++|+++.+ +.+..+...+++...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus 3 k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 81 (256)
T PRK12743 3 QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-GRI 81 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999998864 5566777777777667789999999999999999999999998 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++||++|.....++.+.+.++|++.+++|+.+++.+++++.++|.++ +.++||++||..+..+.++...|+++|++++
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 161 (256)
T PRK12743 82 DVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALG 161 (256)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHH
Confidence 999999998766677788999999999999999999999999999754 3589999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++.++.++||+++.|+||+++|++...
T Consensus 162 ~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~ 193 (256)
T PRK12743 162 GLTKAMALELVEHGILVNAVAPGAIATPMNGM 193 (256)
T ss_pred HHHHHHHHHhhhhCeEEEEEEeCCccCccccc
Confidence 99999999999999999999999999998753
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=237.25 Aligned_cols=189 Identities=31% Similarity=0.402 Sum_probs=173.3
Q ss_pred CEEEEecCCC-chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cC-CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTR-GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KG-FKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~-giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+++||||+| |||++++++|+++|++|++++|+.++++...+++.+ .+ .++..+++|++++++++++++++.+.+ +
T Consensus 18 k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g 96 (262)
T PRK07831 18 KVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERL-G 96 (262)
T ss_pred CEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence 6899999985 999999999999999999999999888887777755 23 468899999999999999999999888 7
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
++|++|||+|.....++.+.+.++|++.+++|+.+++.+++.++|+|.++. .++|++++|..+..+.++...|+++|++
T Consensus 97 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaa 176 (262)
T PRK07831 97 RLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAG 176 (262)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHH
Confidence 899999999987777888899999999999999999999999999998765 7899999999998888899999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++++.|+.++||+|++|+||+++|++...
T Consensus 177 l~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~ 210 (262)
T PRK07831 177 VMALTRCSALEAAEYGVRINAVAPSIAMHPFLAK 210 (262)
T ss_pred HHHHHHHHHHHhCccCeEEEEEeeCCccCccccc
Confidence 9999999999999999999999999999998653
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=262.59 Aligned_cols=189 Identities=26% Similarity=0.314 Sum_probs=177.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|||||+||||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 316 ~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id 394 (582)
T PRK05855 316 KLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH-GVPD 394 (582)
T ss_pred CEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc-CCCc
Confidence 579999999999999999999999999999999988888888887777789999999999999999999999988 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++++.++++|+.|++.+++.++|.|.+++ .|+||++||.++..+.++...|++||+++++
T Consensus 395 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~ 474 (582)
T PRK05855 395 IVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLM 474 (582)
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHH
Confidence 999999998777888899999999999999999999999999998765 5899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+.+.||+|++|+||+|+|+|.+.
T Consensus 475 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 505 (582)
T PRK05855 475 LSECLRAELAAAGIGVTAICPGFVDTNIVAT 505 (582)
T ss_pred HHHHHHHHhcccCcEEEEEEeCCCcccchhc
Confidence 9999999999999999999999999998764
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=239.48 Aligned_cols=190 Identities=25% Similarity=0.302 Sum_probs=170.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-------HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-------LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|+++||||++|||+++|++|+++|++|++++|+.+. ++...+++...+.++.++.+|+++++++.++++++.+
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 86 (273)
T PRK08278 7 KTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVE 86 (273)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 689999999999999999999999999999997642 4445556666677899999999999999999999999
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC--CCChhhh
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--PSVSLYG 151 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~~~~y~ 151 (202)
.+ +++|++|||||.....+..+.+.++++..+++|+.+++.++++++|+|.+++.++|+++||..+..+. ++...|+
T Consensus 87 ~~-g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~ 165 (273)
T PRK08278 87 RF-GGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYT 165 (273)
T ss_pred Hh-CCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchhH
Confidence 88 68999999999877777888899999999999999999999999999988777899999998887776 7889999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCC-cccCCCccch
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPW-VIKTSMIKPF 191 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG-~v~t~~~~~~ 191 (202)
+||+++++++++++.|+.++||+|++|+|| +++|++.++.
T Consensus 166 ~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~ 206 (273)
T PRK08278 166 MAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNL 206 (273)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhc
Confidence 999999999999999999999999999999 6899866543
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=241.09 Aligned_cols=190 Identities=28% Similarity=0.426 Sum_probs=171.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||+++|++|+++|++|++++|+.++++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 41 k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~id 119 (293)
T PRK05866 41 KRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRI-GGVD 119 (293)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 679999999999999999999999999999999998888888877666778899999999999999999999988 7999
Q ss_pred EEEEcCCCCCCCCCCCC--CHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-CCCCChhhhhhHHHH
Q 028868 81 ILINNAAIAFVKPTVDI--TAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~y~asK~a~ 157 (202)
++|||||.....++.+. +.++++..+++|+.|++.++++++|.|.+++.++||++||.++.. +.|+...|+++|+++
T Consensus 120 ~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal 199 (293)
T PRK05866 120 ILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAAL 199 (293)
T ss_pred EEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHH
Confidence 99999998765555442 467899999999999999999999999887789999999976654 467788999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++++.|+.++||++++|+||+++|++..+.
T Consensus 200 ~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~ 233 (293)
T PRK05866 200 SAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT 233 (293)
T ss_pred HHHHHHHHHHhcccCcEEEEEEcCcccCcccccc
Confidence 9999999999999999999999999999998643
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=236.41 Aligned_cols=184 Identities=27% Similarity=0.348 Sum_probs=164.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|++ ......+++...+.++.++.+|+++.+++.++++++.+.+ +++|
T Consensus 9 k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 86 (260)
T PRK12823 9 KVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAF-GRID 86 (260)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHc-CCCe
Confidence 6899999999999999999999999999999985 3445556666667788899999999999999999999988 7899
Q ss_pred EEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.. ...++.+.+.++|++.+++|+.+++.+++.++|+|.+++.++||++||..+. .++..+|++||++++.
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y~~sK~a~~~ 164 (260)
T PRK12823 87 VLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPYSAAKGGVNA 164 (260)
T ss_pred EEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCccHHHHHHHHH
Confidence 999999965 3467788899999999999999999999999999988777899999998764 2345789999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
|+++++.|+.+.||+|++|+||+++||+.
T Consensus 165 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~ 193 (260)
T PRK12823 165 LTASLAFEYAEHGIRVNAVAPGGTEAPPR 193 (260)
T ss_pred HHHHHHHHhcccCcEEEEEecCccCCcch
Confidence 99999999999999999999999999863
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=237.30 Aligned_cols=185 Identities=28% Similarity=0.322 Sum_probs=169.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|||+++|||++++++|+++|++|++++|++++++...+++... +.++.++.+|++++++++++++. + +++
T Consensus 8 k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----~-g~i 82 (259)
T PRK06125 8 KRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----A-GDI 82 (259)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----h-CCC
Confidence 68999999999999999999999999999999998888887777654 45688999999999999888764 3 689
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||+|.....++.+.+.++|+.++++|+.+++.++++++|.|.+++.++||++||..+..+.+++..|+++|+++.+
T Consensus 83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~ 162 (259)
T PRK06125 83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMA 162 (259)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHH
Confidence 99999999877778889999999999999999999999999999988777899999999998888889999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+.+.||+||+|+||+++|++..+
T Consensus 163 ~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~ 193 (259)
T PRK06125 163 FTRALGGKSLDDGVRVVGVNPGPVATDRMLT 193 (259)
T ss_pred HHHHHHHHhCccCeEEEEEecCccccHHHHH
Confidence 9999999999999999999999999997543
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-36 Score=239.13 Aligned_cols=190 Identities=26% Similarity=0.350 Sum_probs=174.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.+.++...+++...+.++.++.+|++|.++++++++.+.+.+ +++|
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~id 85 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF-GAVH 85 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 589999999999999999999999999999999888888888776666778999999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC------CeEEEecCCCCccCCCCChhhhhhH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN------GSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+||||||.....++.+.+.++|+..+++|+.|++.+++.++|.|.++.. ++||++||.++..+.++.+.|+++|
T Consensus 86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK 165 (287)
T PRK06194 86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSK 165 (287)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHH
Confidence 9999999987777888899999999999999999999999999976543 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc--cCCcEEEEeeCCcccCCCccch
Q 028868 155 GAMNQLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 155 ~a~~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++.++++++.++. ..+|++++++||+++|++....
T Consensus 166 ~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~ 204 (287)
T PRK06194 166 HAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSE 204 (287)
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCcccccc
Confidence 999999999999987 3579999999999999987643
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-36 Score=234.85 Aligned_cols=189 Identities=27% Similarity=0.388 Sum_probs=176.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|+++.++...+++...+.++.++.+|+++++++.++++++.+.+ +++|
T Consensus 12 k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 90 (256)
T PRK06124 12 QVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH-GRLD 90 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999988888888887667778999999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|.+++.+++|++||..+..+.++...|+++|++++++
T Consensus 91 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 170 (256)
T PRK06124 91 ILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGL 170 (256)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHHHH
Confidence 99999998777778889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.|+.++|+++++|+||+++|++...
T Consensus 171 ~~~la~e~~~~~i~v~~i~pg~v~t~~~~~ 200 (256)
T PRK06124 171 MRALAAEFGPHGITSNAIAPGYFATETNAA 200 (256)
T ss_pred HHHHHHHHHHhCcEEEEEEECCccCcchhh
Confidence 999999999889999999999999998543
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-36 Score=233.18 Aligned_cols=189 Identities=30% Similarity=0.374 Sum_probs=172.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||++|||+++|++|+++|++|++. .++..+.....+++...+.++..+.+|++|.++++++++++.+.+ +++
T Consensus 4 k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 82 (246)
T PRK12938 4 RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEV-GEI 82 (246)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-CCC
Confidence 689999999999999999999999998874 455666666666666667778899999999999999999999988 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||||.....++.+.+.++|++++++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++++.
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~ 162 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG 162 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHH
Confidence 99999999877667888899999999999999999999999999987777899999999999898999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.++.+.|+++++|+||+++|++...
T Consensus 163 ~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~ 193 (246)
T PRK12938 163 FTMSLAQEVATKGVTVNTVSPGYIGTDMVKA 193 (246)
T ss_pred HHHHHHHHhhhhCeEEEEEEecccCCchhhh
Confidence 9999999999999999999999999998754
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=259.16 Aligned_cols=184 Identities=31% Similarity=0.493 Sum_probs=168.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++ +.++..+.+|++|+++++++++++.+.+ +++|
T Consensus 270 k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 345 (520)
T PRK06484 270 RVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARW-GRLD 345 (520)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999988887766554 3467789999999999999999999998 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||... ..++.+.+.++|++++++|+.|++.+++.++|+|. +.|+||++||.++..+.++...|+++|+++++
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~ 423 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--QGGVIVNLGSIASLLALPPRNAYCASKAAVTM 423 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--cCCEEEEECchhhcCCCCCCchhHHHHHHHHH
Confidence 9999999863 35677889999999999999999999999999993 46899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|+++++.|+.++||+||+|+||+++|++...
T Consensus 424 l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 454 (520)
T PRK06484 424 LSRSLACEWAPAGIRVNTVAPGYIETPAVLA 454 (520)
T ss_pred HHHHHHHHhhhhCeEEEEEEeCCccCchhhh
Confidence 9999999999999999999999999998754
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=235.78 Aligned_cols=190 Identities=29% Similarity=0.337 Sum_probs=166.1
Q ss_pred EEEEecCCCchHHHHHHHHHH----CCCEEEEEeCChhHHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 2 TALVTGGTRGIGHATVEELAR----FGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~----~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++||||++|||+++|++|++ .|++|++++|+++.++...+++.. .+..+.++.+|+++.++++++++.+.+.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 689999999999999999997 799999999999988888888765 24578899999999999999999998876
Q ss_pred CC---CccEEEEcCCCCCCC--CCCC-CCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--CCeEEEecCCCCccCCCCC
Q 028868 76 QG---KLNILINNAAIAFVK--PTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSV 147 (202)
Q Consensus 76 ~~---~id~vi~~ag~~~~~--~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~~~~ 147 (202)
+. ..|++|||||..... ...+ .+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.++.
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~ 161 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW 161 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence 31 136999999975322 2232 25789999999999999999999999998652 4799999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
..|++||+++++|+++++.|+.+.||+||+|+||+++|+|.+..
T Consensus 162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~ 205 (256)
T TIGR01500 162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQV 205 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHH
Confidence 99999999999999999999999999999999999999987643
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-36 Score=236.93 Aligned_cols=183 Identities=32% Similarity=0.370 Sum_probs=163.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|++++++...+++ +.++.++++|+++.++++++++++.+.+ +++|
T Consensus 7 k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 82 (263)
T PRK06200 7 QVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF-GKLD 82 (263)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence 68999999999999999999999999999999988877666554 3467889999999999999999999988 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHH----HHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 81 ILINNAAIAF-VKPTVDITAED----MSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
++|||||... ..++.+.+.++ |++++++|+.+++.++++++|.|+++ .|+||+++|.++..+.++...|++||+
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~ 161 (263)
T PRK06200 83 CFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSSFYPGGGGPLYTASKH 161 (263)
T ss_pred EEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhhcCCCCCCchhHHHHH
Confidence 9999999764 34555666655 88999999999999999999999765 589999999999999889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++.++++++.|+++ +|+||+|+||+++|++..
T Consensus 162 a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~ 194 (263)
T PRK06200 162 AVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRG 194 (263)
T ss_pred HHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcC
Confidence 999999999999987 499999999999999864
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=232.82 Aligned_cols=189 Identities=27% Similarity=0.409 Sum_probs=174.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+++||++++++|+++|++|++ .+|+.++.+...+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 5 ~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 83 (250)
T PRK08063 5 KVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-GRL 83 (250)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 58999999999999999999999999876 5788888877777777767789999999999999999999999988 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+|||++|.....++.+.+.++++..+++|+.+++.++++++|.|.+++.++||++||..+..+.++...|+++|++++.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~ 163 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEA 163 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHH
Confidence 99999999887778888999999999999999999999999999988778899999999888888889999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.++.+.||++++|+||+++|++..+
T Consensus 164 ~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~ 194 (250)
T PRK08063 164 LTRYLAVELAPKGIAVNAVSGGAVDTDALKH 194 (250)
T ss_pred HHHHHHHHHhHhCeEEEeEecCcccCchhhh
Confidence 9999999999899999999999999998654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-36 Score=235.81 Aligned_cols=190 Identities=22% Similarity=0.231 Sum_probs=166.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhH-HHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIE-LDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~-~~~~~~~~~~~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+++||||++|||+++|++|+++| ++|++++|+++. ++.+.+++...+. ++.++.+|++|.++++++++++.+ + +
T Consensus 9 ~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~-g 86 (253)
T PRK07904 9 QTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G-G 86 (253)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c-C
Confidence 689999999999999999999995 899999999886 7777777766543 789999999999999999998876 4 6
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
++|++|||+|..........+.++.++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||+++
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~ 166 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGL 166 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHH
Confidence 89999999998643222223455566789999999999999999999988789999999999888888888999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
.+|+++++.|+.+.||++++|+||+++|++.....
T Consensus 167 ~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~ 201 (253)
T PRK07904 167 DGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK 201 (253)
T ss_pred HHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC
Confidence 99999999999999999999999999999887543
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=232.33 Aligned_cols=191 Identities=32% Similarity=0.449 Sum_probs=176.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||.+++++|+++|++|++++|+++.+....+++...+.++.++.+|++|++++.++++++.+.+ +++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKF-GGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 789999999999999999999999999999999888888877777767789999999999999999999999998 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||+|.....++.+.+.++|++.+++|+.+++.+++.+++.|++++ .+++|++||..+..+.++...|+++|++++.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 159 (254)
T TIGR02415 80 VMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG 159 (254)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence 999999988777888899999999999999999999999999998764 4799999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++.++.++.+.||+++.|+||+++|++.....
T Consensus 160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~ 192 (254)
T TIGR02415 160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEID 192 (254)
T ss_pred HHHHHHHHhcccCeEEEEEecCcccChhhhhhh
Confidence 999999999988999999999999999875443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-36 Score=236.58 Aligned_cols=184 Identities=32% Similarity=0.380 Sum_probs=161.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|+.++++++.+. .+.++..+.+|+++.++++++++++.+.+ +++|
T Consensus 6 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 81 (262)
T TIGR03325 6 EVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAF-GKID 81 (262)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHh-CCCC
Confidence 6899999999999999999999999999999998776665432 24568899999999999999999999988 7999
Q ss_pred EEEEcCCCCCC-CCCCCCCH----HHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 81 ILINNAAIAFV-KPTVDITA----EDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 81 ~vi~~ag~~~~-~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
++|||||.... .++.+.+. ++|++.+++|+.+++.++++++|+|.++ .|++|+++|..+..+.++...|+++|+
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sKa 160 (262)
T TIGR03325 82 CLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAGFYPNGGGPLYTAAKH 160 (262)
T ss_pred EEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccceecCCCCCchhHHHHH
Confidence 99999997532 33433333 5799999999999999999999999765 489999999999998888899999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++++++.|+++. |+||+|+||+++|+|..+
T Consensus 161 a~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~ 194 (262)
T TIGR03325 161 AVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGP 194 (262)
T ss_pred HHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccc
Confidence 9999999999999876 999999999999998653
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-36 Score=241.93 Aligned_cols=187 Identities=27% Similarity=0.280 Sum_probs=164.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||+++|++|+++|++|++++|+.++.++..+++... +.++.++.+|+++.++++++++++.+.+ ++
T Consensus 15 k~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~-~~ 93 (313)
T PRK05854 15 KRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG-RP 93 (313)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC-CC
Confidence 68999999999999999999999999999999999888888887644 3468899999999999999999999887 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC------------CCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG------------IPS 146 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------~~~ 146 (202)
+|++|||||.... +..+.+.++++..+++|+.|++.+++.++|.|+++ .++||++||.++..+ +++
T Consensus 94 iD~li~nAG~~~~-~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~~ 171 (313)
T PRK05854 94 IHLLINNAGVMTP-PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYAG 171 (313)
T ss_pred ccEEEECCccccC-CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCcc
Confidence 9999999998643 33456789999999999999999999999999865 589999999876543 245
Q ss_pred ChhhhhhHHHHHHHHHHHHHHH--ccCCcEEEEeeCCcccCCCccc
Q 028868 147 VSLYGAYKGAMNQLTKNLACEW--AKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~--~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
...|+.||+++.+|++.|+.++ .+.||+||+++||+++|++..+
T Consensus 172 ~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~ 217 (313)
T PRK05854 172 MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAA 217 (313)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCcccc
Confidence 6789999999999999999864 4568999999999999998743
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=233.63 Aligned_cols=189 Identities=29% Similarity=0.434 Sum_probs=169.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+++ .....+++...+.++.++.+|+++.++++++++++.+.+ +++|
T Consensus 7 ~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~id 84 (263)
T PRK08226 7 KTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE-GRID 84 (263)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999875 334445554456678899999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC-ccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~-~~~~~~~~~y~asK~a~~~ 159 (202)
++|||+|.....++.+.+.+++++.+++|+.+++.+++.++|+|.+.+.++||++||..+ ..+.++...|+++|+++++
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~ 164 (263)
T PRK08226 85 ILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVG 164 (263)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHH
Confidence 999999988777888889999999999999999999999999998766789999999887 4566788899999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++.++.++||+|++|+||+++|++....
T Consensus 165 ~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~ 196 (263)
T PRK08226 165 LTKSLAVEYAQSGIRVNAICPGYVRTPMAESI 196 (263)
T ss_pred HHHHHHHHhcccCcEEEEEecCcccCHHHHhh
Confidence 99999999998999999999999999987643
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=232.41 Aligned_cols=188 Identities=29% Similarity=0.346 Sum_probs=173.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|+++.++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 6 k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~d 84 (258)
T PRK07890 6 KVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERF-GRVD 84 (258)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc-CCcc
Confidence 689999999999999999999999999999999988888888877667778999999999999999999999988 7899
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++||+||... ..++.+.+.++++..+++|+.+++.+++++.+.|.+. .++||++||..+..+.++...|+++|++++.
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~ 163 (258)
T PRK07890 85 ALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVLRHSQPKYGAYKMAKGALLA 163 (258)
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhhccCCCCcchhHHHHHHHHH
Confidence 9999999753 3567778999999999999999999999999999765 4799999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++.++.++||++++++||++.|++...
T Consensus 164 l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~ 194 (258)
T PRK07890 164 ASQSLATELGPQGIRVNSVAPGYIWGDPLKG 194 (258)
T ss_pred HHHHHHHHHhhcCcEEEEEeCCccCcHHHHH
Confidence 9999999999999999999999999997653
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=236.06 Aligned_cols=181 Identities=40% Similarity=0.535 Sum_probs=165.7
Q ss_pred cCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEE
Q 028868 7 GGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI 83 (202)
Q Consensus 7 Gas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi 83 (202)
|++ +|||+++|++|+++|++|++++|+.+++++..+++.+. +.+ ++.+|++++++++++++++.+.++++||++|
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV 78 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV 78 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence 566 99999999999999999999999999877777776654 434 5999999999999999999999867999999
Q ss_pred EcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 84 NNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 84 ~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
||+|.... .++.+.+.++|+..+++|+.+++.+++++.|+|+++ |+||++||..+..+.+++..|+++|+++++
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gsii~iss~~~~~~~~~~~~y~~sKaal~~ 156 (241)
T PF13561_consen 79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKG--GSIINISSIAAQRPMPGYSAYSASKAALEG 156 (241)
T ss_dssp EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHE--EEEEEEEEGGGTSBSTTTHHHHHHHHHHHH
T ss_pred ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC--CCcccccchhhcccCccchhhHHHHHHHHH
Confidence 99998765 678888999999999999999999999999999874 899999999999999999999999999999
Q ss_pred HHHHHHHHHcc-CCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++|+++.|+++ +|||||+|+||+++|++....
T Consensus 157 l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~ 189 (241)
T PF13561_consen 157 LTRSLAKELAPKKGIRVNAVSPGPIETPMTERI 189 (241)
T ss_dssp HHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHH
T ss_pred HHHHHHHHhccccCeeeeeecccceeccchhcc
Confidence 99999999999 999999999999999986543
|
... |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-36 Score=235.54 Aligned_cols=182 Identities=27% Similarity=0.321 Sum_probs=167.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||++++++|+++|++|++++|++++++... . .++.++.+|++|.++++++++++.+.+ +++|
T Consensus 4 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~-~~id 76 (273)
T PRK06182 4 KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----S--LGVHPLSLDVTDEASIKAAVDTIIAEE-GRID 76 (273)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----h--CCCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence 68999999999999999999999999999999987765433 2 137788999999999999999999987 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++++..+++|+.+++.+++.++|.|++++.++||++||..+..+.+....|+++|++++++
T Consensus 77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~ 156 (273)
T PRK06182 77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGF 156 (273)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHH
Confidence 99999999877788889999999999999999999999999999887778999999998888888888999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++.|+.+.||+++.|+||+++|++..
T Consensus 157 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~ 185 (273)
T PRK06182 157 SDALRLEVAPFGIDVVVIEPGGIKTEWGD 185 (273)
T ss_pred HHHHHHHhcccCCEEEEEecCCcccccch
Confidence 99999999999999999999999999863
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=230.13 Aligned_cols=188 Identities=31% Similarity=0.396 Sum_probs=175.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|++++.....+.+.+.+.++.++.+|+++++++.++++++.+.+ +++|
T Consensus 7 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 85 (241)
T PRK07454 7 PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQF-GCPD 85 (241)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988877777776666778899999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.++++..+++|+.+++.+++.+.|+|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~ 165 (241)
T PRK07454 86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAF 165 (241)
T ss_pred EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHHH
Confidence 99999998776777788999999999999999999999999999877779999999999988989999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++.++.+.|++++.|.||+++|++..
T Consensus 166 ~~~~a~e~~~~gi~v~~i~pg~i~t~~~~ 194 (241)
T PRK07454 166 TKCLAEEERSHGIRVCTITLGAVNTPLWD 194 (241)
T ss_pred HHHHHHHhhhhCCEEEEEecCcccCCccc
Confidence 99999999989999999999999999865
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=232.10 Aligned_cols=188 Identities=28% Similarity=0.376 Sum_probs=172.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+.+.++.+.+.+. +.++.++.+|+++.+++.++++.+.+.+.+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 689999999999999999999999999999999988777766553 457899999999999999999988776337899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.+++++.+++|+.+++.+++.+.++|++++.++||++||..+..+.++...|++||++++++
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGL 159 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHH
Confidence 99999998877778888999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.++.+.||++++|+||+++|++...
T Consensus 160 ~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~ 189 (260)
T PRK08267 160 TEALDLEWRRHGIRVADVMPLFVDTAMLDG 189 (260)
T ss_pred HHHHHHHhcccCcEEEEEecCCcCCccccc
Confidence 999999999899999999999999998764
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=232.57 Aligned_cols=187 Identities=29% Similarity=0.406 Sum_probs=172.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||.+++++|+++|++|++++|++++++...+.+...+.++.++.+|+++++++.++++++.+.+ +++|
T Consensus 11 ~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 89 (263)
T PRK07814 11 QVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF-GRLD 89 (263)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988888877776666678899999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++||+||.....++.+.+.++++.++++|+.+++.+++++.|+|.+ .+.+++|++||..+..+.++...|+++|++++.
T Consensus 90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 169 (263)
T PRK07814 90 IVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAH 169 (263)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHHHH
Confidence 9999999876667778899999999999999999999999999976 457899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++++++.|+.+ +|++++|+||+++|++..
T Consensus 170 ~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~ 198 (263)
T PRK07814 170 YTRLAALDLCP-RIRVNAIAPGSILTSALE 198 (263)
T ss_pred HHHHHHHHHCC-CceEEEEEeCCCcCchhh
Confidence 99999999976 699999999999999764
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=237.67 Aligned_cols=187 Identities=29% Similarity=0.415 Sum_probs=169.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++.+++ .+..+...+++...+.++.++.+|+++.++++++++++.+ + +++
T Consensus 13 k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~-g~i 90 (306)
T PRK07792 13 KVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-L-GGL 90 (306)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-h-CCC
Confidence 689999999999999999999999999999875 4456677777776677899999999999999999999988 7 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-------CCCeEEEecCCCCccCCCCChhhhh
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-------GNGSIVFISSVGGVRGIPSVSLYGA 152 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-------~~~~iv~vsS~~~~~~~~~~~~y~a 152 (202)
|++|||||+....++.+.+.++|+..+++|+.+++.+++++.|+|+++ ..|+||++||.++..+.++...|++
T Consensus 91 D~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 170 (306)
T PRK07792 91 DIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGA 170 (306)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHH
Confidence 999999999877777888999999999999999999999999999753 1379999999999989889999999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+|++++.+++.++.|+.++||+||+|+|| +.|+|...
T Consensus 171 sKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~ 207 (306)
T PRK07792 171 AKAGITALTLSAARALGRYGVRANAICPR-ARTAMTAD 207 (306)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhh
Confidence 99999999999999999999999999999 48887643
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=234.56 Aligned_cols=185 Identities=22% Similarity=0.280 Sum_probs=169.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||++++++|+++|++|++++|++++++...+. .+.++..+.+|++|++++.++++.+.+.+ +++|
T Consensus 5 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~-~~~d 80 (277)
T PRK06180 5 KTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATF-GPID 80 (277)
T ss_pred CEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 5799999999999999999999999999999998776554432 23468889999999999999999999888 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....+..+.+.+++++.+++|+.|++.++++++|+|++++.++||++||.++..+.++...|+++|++++.+
T Consensus 81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~ 160 (277)
T PRK06180 81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGI 160 (277)
T ss_pred EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999887778999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++.|+.+.|+++++|+||+++|++..
T Consensus 161 ~~~la~e~~~~gi~v~~i~Pg~v~t~~~~ 189 (277)
T PRK06180 161 SESLAKEVAPFGIHVTAVEPGSFRTDWAG 189 (277)
T ss_pred HHHHHHHhhhhCcEEEEEecCCcccCccc
Confidence 99999999988999999999999998753
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=232.33 Aligned_cols=186 Identities=27% Similarity=0.372 Sum_probs=169.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+++||+++|++|+++|++|++++|+.+..+...+++ +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 7 ~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 82 (257)
T PRK07067 7 KVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF-GGID 82 (257)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 57999999999999999999999999999999988777766554 3358889999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++||++|.....++.+.+.++++..+++|+.+++.+++++++.|.++ ..++||++||..+..+.++...|++||++++.
T Consensus 83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 162 (257)
T PRK07067 83 ILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVIS 162 (257)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHH
Confidence 99999998776778888999999999999999999999999998765 35799999999888999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++.|+.++||++++|.||+++|++...
T Consensus 163 ~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~ 193 (257)
T PRK07067 163 YTQSAALALIRHGINVNAIAPGVVDTPMWDQ 193 (257)
T ss_pred HHHHHHHHhcccCeEEEEEeeCcccchhhhh
Confidence 9999999999999999999999999998653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=234.25 Aligned_cols=182 Identities=29% Similarity=0.370 Sum_probs=168.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||++++++|+++|++|++++|++++... ..++.++++|++|+++++++++.+.+.+ +++|
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~-g~~d 75 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARA-GRID 75 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhC-CCCC
Confidence 579999999999999999999999999999999755432 1357889999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....+..+.+.+++++++++|+.|++.+++.++|+|++++.++||++||..+..+.|....|+++|++++.+
T Consensus 76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 155 (270)
T PRK06179 76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGY 155 (270)
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence 99999999877788889999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++.++.|+.+.||++++|+||+++|++....
T Consensus 156 ~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~ 186 (270)
T PRK06179 156 SESLDHEVRQFGIRVSLVEPAYTKTNFDANA 186 (270)
T ss_pred HHHHHHHHhhhCcEEEEEeCCCccccccccc
Confidence 9999999999999999999999999987654
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-36 Score=217.73 Aligned_cols=180 Identities=28% Similarity=0.390 Sum_probs=167.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
|+|||||++|||+++|++|.+.|.+||+++|++++++++.++. ..++...||+.|.+++.++++++++.+ +.+++
T Consensus 7 TiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~-P~lNv 81 (245)
T COG3967 7 TILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY-PNLNV 81 (245)
T ss_pred EEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC-Cchhe
Confidence 7999999999999999999999999999999999998887664 458899999999999999999999999 89999
Q ss_pred EEEcCCCCCCCCCC--CCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 82 LINNAAIAFVKPTV--DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 82 vi~~ag~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+|||||+-....+. +...++.++-+.+|+.+++++++.++|++.+++.+.||+|||..++.|....+.|+++|+|+..
T Consensus 82 liNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHs 161 (245)
T COG3967 82 LINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHS 161 (245)
T ss_pred eeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHH
Confidence 99999987554443 4457778889999999999999999999999988999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
|+.+|+.++...+|.|..+.|..|+|+
T Consensus 162 yt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 162 YTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred HHHHHHHHhhhcceEEEEecCCceecC
Confidence 999999999988999999999999997
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=234.30 Aligned_cols=177 Identities=23% Similarity=0.312 Sum_probs=155.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|||+ +|||+++|++|+ +|++|++++|++++++...+++...+.++.++.+|++|+++++++++++ +.+ +++|
T Consensus 3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~-g~id 78 (275)
T PRK06940 3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTL-GPVT 78 (275)
T ss_pred CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-Hhc-CCCC
Confidence 68999998 699999999996 8999999999988888887777666678899999999999999999988 456 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC----------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---------------- 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------- 144 (202)
++|||||+.. +.++|++++++|+.+++.+++.+.|+|++ .+++|+++|.++..+.
T Consensus 79 ~li~nAG~~~-------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~ 149 (275)
T PRK06940 79 GLVHTAGVSP-------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALATTPTE 149 (275)
T ss_pred EEEECCCcCC-------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccccccccc
Confidence 9999999742 23679999999999999999999999975 3678999998876542
Q ss_pred --------------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 145 --------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 145 --------------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++...|++||+|+..+++.++.|+.++||+||+|+||+++|++..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~ 209 (275)
T PRK06940 150 ELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQD 209 (275)
T ss_pred cccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchh
Confidence 2467899999999999999999999999999999999999998753
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=232.35 Aligned_cols=189 Identities=23% Similarity=0.322 Sum_probs=172.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCe-EEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFK-VTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~-v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||++|||++++++|+++|++|++++|+++.++...+++...+.. +.++.+|++++++++++++++.+.+ +++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH-GSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence 68999999999999999999999999999999998888887777655443 4567899999999999999999888 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++|||+|.....++.+.+.++++..+++|+.+++.++++++|.|.++ ..++||++||..+..+.++...|+++|+++.
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 159 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR 159 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence 999999998777778889999999999999999999999999999764 3589999999998888889999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++.|+.+.||+|+.|+||+++|+++.+
T Consensus 160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~ 191 (272)
T PRK07832 160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNT 191 (272)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCcchhc
Confidence 99999999999899999999999999998764
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-35 Score=229.34 Aligned_cols=181 Identities=20% Similarity=0.234 Sum_probs=160.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++... +++...+ +.++.+|+++.++++++++++.+.+ +++|
T Consensus 3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 76 (236)
T PRK06483 3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHT-DGLR 76 (236)
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhC-CCcc
Confidence 68999999999999999999999999999999876543 2333323 6778999999999999999999988 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--CCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
++|||||........+.+.++|++++++|+.+++.+++.++|+|++++ .++||++||..+..+.++...|+++|++++
T Consensus 77 ~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~ 156 (236)
T PRK06483 77 AIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALD 156 (236)
T ss_pred EEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHH
Confidence 999999986555556778999999999999999999999999998765 589999999998888889999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+++++++.|+++ +||||+|+||++.|+..
T Consensus 157 ~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~ 185 (236)
T PRK06483 157 NMTLSFAAKLAP-EVKVNSIAPALILFNEG 185 (236)
T ss_pred HHHHHHHHHHCC-CcEEEEEccCceecCCC
Confidence 999999999987 59999999999988643
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=229.50 Aligned_cols=188 Identities=29% Similarity=0.335 Sum_probs=168.3
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCC-----------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRN-----------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~-----------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~ 67 (202)
|++|||||++ |||.++|++|+++|++|++++|+ ........+++...+.++.++.+|+++++++.++
T Consensus 6 k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 85 (256)
T PRK12748 6 KIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRV 85 (256)
T ss_pred cEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 6899999994 99999999999999999999987 2222224445555566799999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC
Q 028868 68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV 147 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~ 147 (202)
++++.+.+ +++|++||+||+....++.+.+.+++++.+++|+.+++.+++++.|.|.++..++||++||..+..+.++.
T Consensus 86 ~~~~~~~~-g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~ 164 (256)
T PRK12748 86 FYAVSERL-GDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDE 164 (256)
T ss_pred HHHHHHhC-CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCCc
Confidence 99999998 68999999999877778888899999999999999999999999999987667899999999988888889
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
..|+++|+++++++++++.++.+.||+|++++||+++|++..
T Consensus 165 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~ 206 (256)
T PRK12748 165 LAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT 206 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC
Confidence 999999999999999999999989999999999999999764
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=227.72 Aligned_cols=190 Identities=28% Similarity=0.354 Sum_probs=170.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
++||||++|||+++|++|+++|++|++++|+ .++++...+++...+.++.++.+|++|.+++.++++++.+.+ +++|.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH-GAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCCCE
Confidence 5899999999999999999999999998865 456666777776667789999999999999999999988887 78999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHh-HHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH-PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+|||+|.....++.+.+.++|+.++++|+.+++.++++++ |.+++++.++||++||..+..+.++...|+++|++++++
T Consensus 80 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 159 (239)
T TIGR01831 80 VVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA 159 (239)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence 9999998776677788999999999999999999999875 666655678999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+++++.|+.++||++++|+||+++|++..+..+
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~ 192 (239)
T TIGR01831 160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVEH 192 (239)
T ss_pred HHHHHHHHhHhCeEEEEEEEccCccccchhhhH
Confidence 999999999899999999999999999875443
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=229.13 Aligned_cols=188 Identities=26% Similarity=0.248 Sum_probs=170.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+++||++++++|+++|++|++++|+.+.++...+++.... .++.++.+|+++.+++.++++++.+.+ ++
T Consensus 3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~-~~ 81 (259)
T PRK12384 3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIF-GR 81 (259)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 689999999999999999999999999999999888777776665432 468999999999999999999999988 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|++||+||.....++.+.+.++|+..+++|+.+++.++++++|.|.+++ .+++|++||..+..+.+....|+++|+++
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~ 161 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG 161 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence 99999999988777888899999999999999999999999999998765 68999999998888888889999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcc-cCCCcc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVI-KTSMIK 189 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v-~t~~~~ 189 (202)
++++++++.|+.+.||+|++|+||++ .|+++.
T Consensus 162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~ 194 (259)
T PRK12384 162 VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ 194 (259)
T ss_pred HHHHHHHHHHHHHcCcEEEEEecCCcccchhhh
Confidence 99999999999999999999999975 677654
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=227.08 Aligned_cols=191 Identities=27% Similarity=0.382 Sum_probs=173.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||++++++|+++|++|++++|++++++...+++... +.++.++.+|+++.++++++++++.+.+ ++
T Consensus 3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 81 (248)
T PRK08251 3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-GG 81 (248)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence 68999999999999999999999999999999998888777766543 5678999999999999999999999988 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCC-ChhhhhhHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-VSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-~~~y~asK~a~ 157 (202)
+|++|||||+....+..+.+.+.++..+++|+.+++.+++.++|+|++.+.++||++||..+..+.++ ...|+.||+++
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~ 161 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGV 161 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHH
Confidence 99999999998777777788999999999999999999999999998877889999999988888775 68899999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+.+++.++.++.+.|+++++|+||+++|++.....
T Consensus 162 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~ 196 (248)
T PRK08251 162 ASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK 196 (248)
T ss_pred HHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc
Confidence 99999999999888999999999999999876543
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=231.67 Aligned_cols=185 Identities=26% Similarity=0.380 Sum_probs=170.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|++++++...+.+ +..+..+.+|++|+++++++++.+.+.+ +++|
T Consensus 4 k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 79 (275)
T PRK08263 4 KVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHF-GRLD 79 (275)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999988776655443 3457888999999999999999998887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||+||.....++.+.+.+++++++++|+.+++.+++.++|.|++++.+++|++||..+..+.++...|+++|++++.+
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (275)
T PRK08263 80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGM 159 (275)
T ss_pred EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHH
Confidence 99999999877888889999999999999999999999999999887788999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.++.++.+.|++++.++||+++|++..
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~~~t~~~~ 188 (275)
T PRK08263 160 SEALAQEVAEFGIKVTLVEPGGYSTDWAG 188 (275)
T ss_pred HHHHHHHhhhhCcEEEEEecCCccCCccc
Confidence 99999999989999999999999999874
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=230.45 Aligned_cols=185 Identities=29% Similarity=0.432 Sum_probs=169.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||.+++++|+++|++|++++|+.+.++...+++...+.++.++.+|++++++++++++++.+.+ +++|
T Consensus 10 k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~-~~iD 88 (264)
T PRK07576 10 KNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF-GPID 88 (264)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999888877777776666677889999999999999999998888 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++++..+++|+.|++.++++++|+|+++ .|+||++||..+..+.++...|+++|++++.|
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l 167 (264)
T PRK07576 89 VLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAFVPMPMQAHVCAAKAGVDML 167 (264)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhccCCCCccHHHHHHHHHHHH
Confidence 99999997766677888999999999999999999999999999765 48999999999888889999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCccc-CCC
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIK-TSM 187 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~-t~~ 187 (202)
+++++.|+.++||+++.|+||+++ |+.
T Consensus 168 ~~~la~e~~~~gi~v~~v~pg~~~~t~~ 195 (264)
T PRK07576 168 TRTLALEWGPEGIRVNSIVPGPIAGTEG 195 (264)
T ss_pred HHHHHHHhhhcCeEEEEEecccccCcHH
Confidence 999999999999999999999997 553
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=229.02 Aligned_cols=186 Identities=33% Similarity=0.480 Sum_probs=167.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||.++|++|+++|++|++++|+.+.. ....++. +..+.++.+|++++++++++++++.+.+ +++|
T Consensus 16 k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d 91 (255)
T PRK06841 16 KVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF-GRID 91 (255)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence 6899999999999999999999999999999987643 3333332 3457789999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....+..+.+.++++..+++|+.+++.+++.+.|.|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 171 (255)
T PRK06841 92 ILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGM 171 (255)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHH
Confidence 99999998877777788999999999999999999999999999887789999999999989999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.++||++++|+||+++|++...
T Consensus 172 ~~~la~e~~~~gi~v~~v~pg~v~t~~~~~ 201 (255)
T PRK06841 172 TKVLALEWGPYGITVNAISPTVVLTELGKK 201 (255)
T ss_pred HHHHHHHHHhhCeEEEEEEeCcCcCccccc
Confidence 999999999999999999999999998654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-35 Score=227.29 Aligned_cols=190 Identities=28% Similarity=0.381 Sum_probs=176.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+++++....+++...+.++.++.+|++++++++++++++.+.+ +++|
T Consensus 8 ~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 86 (250)
T PRK12939 8 KRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAAL-GGLD 86 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988888888776666789999999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....+..+.+.++++..++.|+.+++.+++.+.|+|.+++.+++|++||..+..+.++...|+++|++++.+
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~ 166 (250)
T PRK12939 87 GLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGM 166 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHHH
Confidence 99999998877777888999999999999999999999999999887788999999999999989999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++.++.++.+++|+++.|+||+++|++....
T Consensus 167 ~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~ 197 (250)
T PRK12939 167 TRSLARELGGRGITVNAIAPGLTATEATAYV 197 (250)
T ss_pred HHHHHHHHhhhCEEEEEEEECCCCCcccccc
Confidence 9999999998999999999999999987643
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=230.67 Aligned_cols=185 Identities=30% Similarity=0.329 Sum_probs=167.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++. +..+++...+.++.++.+|+++.++++++++++.+.+ +++|
T Consensus 8 ~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 85 (258)
T PRK08628 8 KVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF-GRID 85 (258)
T ss_pred CEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence 6899999999999999999999999999999998776 6666666667778999999999999999999999988 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+ ++|+..+++|+.+++.+++.++|.|++. .++|+++||..+..+.++...|++||++++++
T Consensus 86 ~vi~~ag~~~~~~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 163 (258)
T PRK08628 86 GLVNNAGVNDGVGLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKGAQLAL 163 (258)
T ss_pred EEEECCcccCCCcccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHHHHHHH
Confidence 999999976544555444 9999999999999999999999999765 58999999999999988999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.++.|+.++||+++.|+||+++|++..
T Consensus 164 ~~~l~~e~~~~~i~v~~v~pg~v~t~~~~ 192 (258)
T PRK08628 164 TREWAVALAKDGVRVNAVIPAEVMTPLYE 192 (258)
T ss_pred HHHHHHHHhhcCeEEEEEecCccCCHHHH
Confidence 99999999989999999999999999864
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=228.79 Aligned_cols=183 Identities=27% Similarity=0.299 Sum_probs=164.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||+++|++|+++|++|++++|+.++.....+++ +.++.++.+|+++.++++++++++.+.+ +++|
T Consensus 11 k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 86 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQF-GRLD 86 (255)
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 68999999999999999999999999999999877666554433 4468899999999999999999999988 7899
Q ss_pred EEEEcCCCCCC--CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
++|||||.... .++.+.+.++|+..+++|+.+++.+++++.|+|.+. .++||++||..+..+.++...|+++|++++
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~ 165 (255)
T PRK05717 87 ALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRARQSEPDTEAYAASKGGLL 165 (255)
T ss_pred EEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence 99999998643 466778999999999999999999999999999765 489999999999999899999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.+++.++.++++ +++|++|+||+++|++..
T Consensus 166 ~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~ 195 (255)
T PRK05717 166 ALTHALAISLGP-EIRVNAVSPGWIDARDPS 195 (255)
T ss_pred HHHHHHHHHhcC-CCEEEEEecccCcCCccc
Confidence 999999999976 599999999999998754
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=230.40 Aligned_cols=180 Identities=30% Similarity=0.350 Sum_probs=162.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+++.. ...++.++.+|++|+++++++++++.+.+ +++|
T Consensus 10 k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 79 (260)
T PRK06523 10 KRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVLERL-GGVD 79 (260)
T ss_pred CEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999999999986431 13358889999999999999999999988 7899
Q ss_pred EEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC-CChhhhhhHHHH
Q 028868 81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~y~asK~a~ 157 (202)
++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++||++||..+..+.+ +...|+++|+++
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~ 159 (260)
T PRK06523 80 ILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAAL 159 (260)
T ss_pred EEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHH
Confidence 9999999652 3456778999999999999999999999999999887778999999999888755 788999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+.+++.++.++.++||+++.|+||+++|++...
T Consensus 160 ~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~ 192 (260)
T PRK06523 160 STYSKSLSKEVAPKGVRVNTVSPGWIETEAAVA 192 (260)
T ss_pred HHHHHHHHHHHhhcCcEEEEEecCcccCccHHH
Confidence 999999999999999999999999999998643
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=236.16 Aligned_cols=186 Identities=20% Similarity=0.239 Sum_probs=161.9
Q ss_pred EEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 4 LVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 4 lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
|||||++|||++++++|+++| ++|++++|++++.+...+++...+..+.++.+|++|.++++++++++.+.+ +++|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSG-RPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcC-CCCCEE
Confidence 699999999999999999999 999999999988887777775445678889999999999999999998876 789999
Q ss_pred EEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--CCeEEEecCCCCccC----------------
Q 028868 83 INNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRG---------------- 143 (202)
Q Consensus 83 i~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~---------------- 143 (202)
|||||+... .+..+.+.++|+.++++|+.|++.+++.++|.|.+++ .|+||++||.++..+
T Consensus 80 InnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~ 159 (308)
T PLN00015 80 VCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLR 159 (308)
T ss_pred EECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhh
Confidence 999998533 3556788999999999999999999999999998765 589999999876421
Q ss_pred -------------------CCCChhhhhhHHHHHHHHHHHHHHHcc-CCcEEEEeeCCcc-cCCCccc
Q 028868 144 -------------------IPSVSLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVI-KTSMIKP 190 (202)
Q Consensus 144 -------------------~~~~~~y~asK~a~~~~~~~la~e~~~-~gi~v~~v~pG~v-~t~~~~~ 190 (202)
.++...|++||++...+++.+++++.+ .||+|++|+||+| .|+|.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~ 227 (308)
T PLN00015 160 GLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE 227 (308)
T ss_pred hhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence 123567999999999999999999965 6999999999999 7898754
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=227.36 Aligned_cols=189 Identities=32% Similarity=0.420 Sum_probs=174.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+.+......+++. .+.++..+++|++|.++++++++++.+.+ +++|
T Consensus 6 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~-~~id 83 (252)
T PRK06138 6 RVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW-GRLD 83 (252)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999887777776665 45678999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.++++..+++|+.+++.+++.+++.|++++.++|+++||..+..+.++...|+.+|++++.+
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 163 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASL 163 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHH
Confidence 99999998777777888999999999999999999999999999887788999999998888888899999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+.++|+++++++||++.|++..+.
T Consensus 164 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~ 194 (252)
T PRK06138 164 TRAMALDHATDGIRVNAVAPGTIDTPYFRRI 194 (252)
T ss_pred HHHHHHHHHhcCeEEEEEEECCccCcchhhh
Confidence 9999999998899999999999999987654
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=225.08 Aligned_cols=190 Identities=31% Similarity=0.397 Sum_probs=175.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|+.++++...+++...+.++.++.+|+++++++.++++++.+.+ +++|
T Consensus 8 ~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 86 (239)
T PRK07666 8 KNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNEL-GSID 86 (239)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCcc
Confidence 579999999999999999999999999999999888887777776666689999999999999999999999888 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.+++++.+++|+.+++.+++.+.|.|.+++.+++|++||..+..+.++...|+.+|+++..+
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 166 (239)
T PRK07666 87 ILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGL 166 (239)
T ss_pred EEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence 99999998766677788999999999999999999999999999887788999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++.++.|+.+.|++++.|+||++.|++..+.
T Consensus 167 ~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~ 197 (239)
T PRK07666 167 TESLMQEVRKHNIRVTALTPSTVATDMAVDL 197 (239)
T ss_pred HHHHHHHhhccCcEEEEEecCcccCcchhhc
Confidence 9999999998999999999999999986543
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-35 Score=228.82 Aligned_cols=189 Identities=30% Similarity=0.415 Sum_probs=175.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+++..+...+++.+.+.++.++++|+++.++++++++.+.+.+ +++|
T Consensus 8 ~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d 86 (262)
T PRK13394 8 KTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERF-GSVD 86 (262)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988888888887767788999999999999999999998887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHH-hcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+|||++|.....++.+.+.++++..+++|+.+++.+++.+++.| ++.+.++||++||..+..+.++...|+++|++++.
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~ 166 (262)
T PRK13394 87 ILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLG 166 (262)
T ss_pred EEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHH
Confidence 99999998777777778899999999999999999999999999 66667899999999888888888999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++.++.+.||++++|+||+++|++...
T Consensus 167 ~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~ 197 (262)
T PRK13394 167 LARVLAKEGAKHNVRSHVVCPGFVRTPLVDK 197 (262)
T ss_pred HHHHHHHHhhhcCeEEEEEeeCcccchhhhh
Confidence 9999999998889999999999999997643
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=226.36 Aligned_cols=190 Identities=33% Similarity=0.445 Sum_probs=172.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+++||.++|++|+++|++|+++.+ +++..+...+++...+.++.++.+|+++++++.++++++.+.+ +++
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 85 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF-GKV 85 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999987654 5566666667776666789999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++||+||.....++.+.+.+++++.+++|+.+++.+++.++|.|.+++.+++|++||..+..+.++...|+++|+++++
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 165 (247)
T PRK12935 86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLG 165 (247)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHH
Confidence 99999999877667778889999999999999999999999999987767899999999998888889999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++.++.+.|++++.++||+++|++....
T Consensus 166 ~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~ 197 (247)
T PRK12935 166 FTKSLALELAKTNVTVNAICPGFIDTEMVAEV 197 (247)
T ss_pred HHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc
Confidence 99999999988899999999999999986644
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-37 Score=225.85 Aligned_cols=183 Identities=30% Similarity=0.430 Sum_probs=162.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH--hcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|.+++||+.||||++++++|+++|..+.++.-+.|+.+.. .++. .+...+.++++|+++..++++.++++..+| +.
T Consensus 6 Kna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~-akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f-g~ 83 (261)
T KOG4169|consen 6 KNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAI-AKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF-GT 83 (261)
T ss_pred ceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHH-HHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh-Cc
Confidence 6899999999999999999999999887777666664433 3333 335679999999999999999999999999 89
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC---CCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
||++||+||+. +..+|+.++++|+.|.+.-+..++|+|.++ .+|-||++||..|..|.|-.+.|++||+
T Consensus 84 iDIlINgAGi~--------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKa 155 (261)
T KOG4169|consen 84 IDILINGAGIL--------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKA 155 (261)
T ss_pred eEEEEcccccc--------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhccc
Confidence 99999999985 356799999999999999999999999865 3689999999999999999999999999
Q ss_pred HHHHHHHHHHHHH--ccCCcEEEEeeCCcccCCCccchhh
Q 028868 156 AMNQLTKNLACEW--AKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 156 a~~~~~~~la~e~--~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
++.+|+|+++.+. .+.||+++.||||++.|++..++..
T Consensus 156 GVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~ 195 (261)
T KOG4169|consen 156 GVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDA 195 (261)
T ss_pred ceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHh
Confidence 9999999999884 5779999999999999999877643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=251.31 Aligned_cols=186 Identities=32% Similarity=0.502 Sum_probs=170.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|+.++++...+++ +.++.++.+|++++++++++++++.+.+ +++|
T Consensus 6 k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD 81 (520)
T PRK06484 6 RVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREF-GRID 81 (520)
T ss_pred eEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHh-CCCC
Confidence 68999999999999999999999999999999988877766554 4568889999999999999999999998 7999
Q ss_pred EEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCC-eEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|.+++.| +||++||..+..+.++...|+++|+++
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal 161 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAV 161 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHH
Confidence 9999999742 3467788999999999999999999999999999776554 999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
..|+++++.|+.+.||+|++|+||+++|++...
T Consensus 162 ~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~ 194 (520)
T PRK06484 162 ISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAE 194 (520)
T ss_pred HHHHHHHHHHhhhhCeEEEEEccCCcCchhhhh
Confidence 999999999999999999999999999998754
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=227.12 Aligned_cols=189 Identities=29% Similarity=0.409 Sum_probs=173.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|++++++...+++...+.++.++.+|+++.+++.++++++.+.+ +++|
T Consensus 10 k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 88 (258)
T PRK06949 10 KVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA-GTID 88 (258)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999998888887776666678999999999999999999998887 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--------CCeEEEecCCCCccCCCCChhhhh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--------NGSIVFISSVGGVRGIPSVSLYGA 152 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--------~~~iv~vsS~~~~~~~~~~~~y~a 152 (202)
++||++|.....++.+.+.++|+.++++|+.+++.++++++|.|.++. .+++|++||..+..+.+....|++
T Consensus 89 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~ 168 (258)
T PRK06949 89 ILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCM 168 (258)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHH
Confidence 999999987667777888999999999999999999999999987553 479999999998888888899999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+|++++.+++.++.++.++||++++|+||+++|++...
T Consensus 169 sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~ 206 (258)
T PRK06949 169 SKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHH 206 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchh
Confidence 99999999999999999899999999999999998754
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=228.26 Aligned_cols=180 Identities=31% Similarity=0.455 Sum_probs=164.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+.++ ...+..+.++.+|+++.++++++++.+.+.+ +++|
T Consensus 7 k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 77 (252)
T PRK07856 7 RVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH-GRLD 77 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999998754 1224568899999999999999999999988 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....+..+.+.++|++.+++|+.+++.+++.+.|+|.++ +.++||++||..+..+.++...|+++|+++++
T Consensus 78 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~ 157 (252)
T PRK07856 78 VLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLN 157 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHH
Confidence 99999998776777788999999999999999999999999999864 45899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|++.++.|+.+. |+++.|+||+++|++...
T Consensus 158 l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~ 187 (252)
T PRK07856 158 LTRSLAVEWAPK-VRVNAVVVGLVRTEQSEL 187 (252)
T ss_pred HHHHHHHHhcCC-eEEEEEEeccccChHHhh
Confidence 999999999877 999999999999998653
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=229.89 Aligned_cols=182 Identities=28% Similarity=0.351 Sum_probs=165.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+||||++++++|+++|++|++++|+.++++... .. .+.++.+|+++.++++++++.+.+.+ +++|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 74 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEH-GGLD 74 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence 68999999999999999999999999999999987655432 22 36788999999999999999998887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++++..+++|+.|++.+++.++|.|+++ .++||++||..+..+.++...|+++|++++.+
T Consensus 75 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~ 153 (274)
T PRK05693 75 VLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHAL 153 (274)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence 99999998777778888999999999999999999999999999764 58999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+.||+|++|+||+++|++...
T Consensus 154 ~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~ 183 (274)
T PRK05693 154 SDALRLELAPFGVQVMEVQPGAIASQFASN 183 (274)
T ss_pred HHHHHHHhhhhCeEEEEEecCccccccccc
Confidence 999999999999999999999999998764
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=234.49 Aligned_cols=189 Identities=20% Similarity=0.225 Sum_probs=163.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||++|||+++|++|+++| ++|++++|++++++...+++...+..+.++.+|+++.++++++++++.+.+ +++
T Consensus 4 k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~i 82 (314)
T TIGR01289 4 PTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESG-RPL 82 (314)
T ss_pred CEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 689999999999999999999999 999999999988888777776555678889999999999999999998887 789
Q ss_pred cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--CCeEEEecCCCCccC-------------
Q 028868 80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRG------------- 143 (202)
Q Consensus 80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~------------- 143 (202)
|++|||||+... .+..+.+.++|+.++++|+.+++.+++.++|+|++++ .++||++||.++...
T Consensus 83 D~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~ 162 (314)
T TIGR01289 83 DALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLG 162 (314)
T ss_pred CEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccccc
Confidence 999999997532 2334568899999999999999999999999998753 489999999876421
Q ss_pred --------------------CCCChhhhhhHHHHHHHHHHHHHHHc-cCCcEEEEeeCCcc-cCCCccc
Q 028868 144 --------------------IPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVI-KTSMIKP 190 (202)
Q Consensus 144 --------------------~~~~~~y~asK~a~~~~~~~la~e~~-~~gi~v~~v~pG~v-~t~~~~~ 190 (202)
+.+...|++||+++..+++.|++++. ++||+|++|+||+| +|+|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~ 231 (314)
T TIGR01289 163 DLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFRE 231 (314)
T ss_pred ccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccc
Confidence 12346799999999999999999985 46899999999999 6998764
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=226.85 Aligned_cols=189 Identities=33% Similarity=0.493 Sum_probs=171.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||.++|++|+++|++|++++|+.++++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 13 k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~-~~id 91 (259)
T PRK08213 13 KTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF-GHVD 91 (259)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999988888877776666778899999999999999999999987 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHH-HhcCCCCeEEEecCCCCccCCCC----ChhhhhhHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL-FKASGNGSIVFISSVGGVRGIPS----VSLYGAYKG 155 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-~~~~~~~~iv~vsS~~~~~~~~~----~~~y~asK~ 155 (202)
++||++|.....+..+.+.+.|++.+++|+.+++.+++++.|+ |.+++.+++|++||..+..+.++ ...|+++|+
T Consensus 92 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa 171 (259)
T PRK08213 92 ILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKG 171 (259)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHHH
Confidence 9999999876667778899999999999999999999999998 77666789999999877766544 488999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++++++.++.++|++++.|+||+++|++..+
T Consensus 172 ~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~ 206 (259)
T PRK08213 172 AVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG 206 (259)
T ss_pred HHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh
Confidence 99999999999999999999999999999998654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=227.82 Aligned_cols=187 Identities=28% Similarity=0.357 Sum_probs=172.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|+++.+.....++ ..+.++.++.+|++|.++++++++.+.+ + +++|
T Consensus 6 ~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~-~~id 82 (263)
T PRK09072 6 KRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-M-GGIN 82 (263)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-c-CCCC
Confidence 57999999999999999999999999999999998888777776 4456788999999999999999999876 5 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||+||.....++.+.+.+++++.+++|+.|++.+++.++|+|.+++.+++|++||..+..+.++...|+++|+++.++
T Consensus 83 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 162 (263)
T PRK09072 83 VLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGF 162 (263)
T ss_pred EEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHH
Confidence 99999998777778888999999999999999999999999999887778999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.++.+.||+|++|+||+++|++...
T Consensus 163 ~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~ 192 (263)
T PRK09072 163 SEALRRELADTGVRVLYLAPRATRTAMNSE 192 (263)
T ss_pred HHHHHHHhcccCcEEEEEecCcccccchhh
Confidence 999999999899999999999999998654
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-35 Score=226.66 Aligned_cols=183 Identities=31% Similarity=0.401 Sum_probs=166.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|+++.++...+++ +.++.++++|+++.+++.++++.+.+.+ +++|
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 82 (249)
T PRK06500 7 KTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAF-GRLD 82 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence 68999999999999999999999999999999987766655544 4568889999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.+++++.+++|+.+++.+++++.|+|++ .+++++++|..+..+.++...|+++|++++++
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~ 160 (249)
T PRK06500 83 AVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSINAHIGMPNSSVYAASKAALLSL 160 (249)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechHhccCCCCccHHHHHHHHHHHH
Confidence 9999999877677778899999999999999999999999999964 47899999988888889999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++.|+.++||++++|+||+++|++..
T Consensus 161 ~~~la~e~~~~gi~v~~i~pg~~~t~~~~ 189 (249)
T PRK06500 161 AKTLSGELLPRGIRVNAVSPGPVQTPLYG 189 (249)
T ss_pred HHHHHHHhhhcCeEEEEEeeCcCCCHHHH
Confidence 99999999989999999999999999764
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=224.31 Aligned_cols=190 Identities=26% Similarity=0.319 Sum_probs=169.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCC--HHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS--REQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~--~~~i~~~~~~~~~~~~~ 77 (202)
|+++||||++|||++++++|+++|++|++++|++++++...+++... +..+.++.+|+++ .+++.++++++.+.+++
T Consensus 7 k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~ 86 (239)
T PRK08703 7 KTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQG 86 (239)
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCC
Confidence 68999999999999999999999999999999998888877777544 3457788999986 56889999999888745
Q ss_pred CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 78 KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 78 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
++|++||+||... ..++.+.+.++|++.+++|+.|++.+++.++|.|.+.+.++++++||..+..+.++...|++||++
T Consensus 87 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa 166 (239)
T PRK08703 87 KLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAA 166 (239)
T ss_pred CCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHHH
Confidence 8999999999753 357788899999999999999999999999999987777899999999999998888999999999
Q ss_pred HHHHHHHHHHHHccC-CcEEEEeeCCcccCCCccc
Q 028868 157 MNQLTKNLACEWAKD-NIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 157 ~~~~~~~la~e~~~~-gi~v~~v~pG~v~t~~~~~ 190 (202)
++.+++.++.|+.++ +|+|+.|+||+|+|++...
T Consensus 167 ~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~ 201 (239)
T PRK08703 167 LNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK 201 (239)
T ss_pred HHHHHHHHHHHhccCCCeEEEEEecCcccCccccc
Confidence 999999999999876 6999999999999998654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=224.68 Aligned_cols=190 Identities=32% Similarity=0.490 Sum_probs=173.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||.+++++|+++|++|++++|++++.......+.. +.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 6 ~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 83 (251)
T PRK07231 6 KVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERF-GSVD 83 (251)
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 5899999999999999999999999999999999888777776654 5678999999999999999999998887 7899
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++||++|... ..++.+.+.+++++.+++|+.+++.+++.+.++|.+++.+++|++||..+..+.++...|+.+|++++.
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~ 163 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVIT 163 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHH
Confidence 9999999753 445677899999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++.++.++.+.||++++++||+++|++.....
T Consensus 164 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~ 196 (251)
T PRK07231 164 LTKALAAELGPDKIRVNAVAPVVVETGLLEAFM 196 (251)
T ss_pred HHHHHHHHhhhhCeEEEEEEECccCCCcchhhh
Confidence 999999999888999999999999999876543
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=223.98 Aligned_cols=189 Identities=31% Similarity=0.347 Sum_probs=169.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+++||+++|++|+++|++|++++|+.+ ........+...+.++.++.+|+++.+++.++++.+.+.+ +++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEE-GPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 58999999999999999999999999999999854 2333333333335578899999999999999999999988 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++||++|.....++.+.+.++|+++++.|+.+++.+++.++|.|++.+.++||++||..+..+.++...|+++|+++++
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~ 161 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIG 161 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 99999999887777888899999999999999999999999999988778899999999999998999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++.++.++|++++.++||+++|++.+.
T Consensus 162 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 192 (245)
T PRK12824 162 FTKALASEGARYGITVNCIAPGYIATPMVEQ 192 (245)
T ss_pred HHHHHHHHHHHhCeEEEEEEEcccCCcchhh
Confidence 9999999999899999999999999998764
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=225.92 Aligned_cols=189 Identities=30% Similarity=0.410 Sum_probs=176.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+++++....+++...+.++..+.+|++|+++++++++.+.+.+ +++|
T Consensus 5 ~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d 83 (258)
T PRK12429 5 KVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETF-GGVD 83 (258)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988888888877667789999999999999999999999987 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....+..+.+.++++..+++|+.+++.+++.+++.|++++.++||++||..+..+.++...|+++|++++.+
T Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~ 163 (258)
T PRK12429 84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGL 163 (258)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHHH
Confidence 99999998877778888999999999999999999999999999988789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.++.+.||+++.++||+++|++...
T Consensus 164 ~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~ 193 (258)
T PRK12429 164 TKVVALEGATHGVTVNAICPGYVDTPLVRK 193 (258)
T ss_pred HHHHHHHhcccCeEEEEEecCCCcchhhhh
Confidence 999999998889999999999999988754
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=225.01 Aligned_cols=189 Identities=26% Similarity=0.393 Sum_probs=175.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+++||++++++|+++|++|++++|+.++.....+++...+.++.++.+|+++.++++++++.+.+.+ +++|
T Consensus 4 ~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~d 82 (250)
T TIGR03206 4 KTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQAL-GPVD 82 (250)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988887777776666789999999999999999999999887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.++++..+++|+.+++.+++.+++.|++.+.++++++||..+..+.++...|+.+|++++.+
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~ 162 (250)
T TIGR03206 83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAF 162 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHHH
Confidence 99999998766777788899999999999999999999999999887778999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.++.+.|++++.++||+++|++...
T Consensus 163 ~~~la~~~~~~~i~v~~v~pg~~~~~~~~~ 192 (250)
T TIGR03206 163 SKTMAREHARHGITVNVVCPGPTDTALLDD 192 (250)
T ss_pred HHHHHHHHhHhCcEEEEEecCcccchhHHh
Confidence 999999998889999999999999997654
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=225.21 Aligned_cols=186 Identities=30% Similarity=0.332 Sum_probs=161.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||++|||++++++|+++|++|+++.+ ++++.+....++ +.++.++.+|++++++++++++++.+.++.++
T Consensus 6 k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 6 QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHFGKPI 82 (253)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 68999999999999999999999999988655 555554444433 34688899999999999999999998884349
Q ss_pred cEEEEcCCCCC------CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 80 NILINNAAIAF------VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 80 d~vi~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
|++|||||... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~s 162 (253)
T PRK08642 83 TTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTA 162 (253)
T ss_pred eEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHH
Confidence 99999998642 235677899999999999999999999999999987767899999998877777778899999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+++++++++++.++.++||+||+|+||+++|+...
T Consensus 163 K~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~ 198 (253)
T PRK08642 163 KAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDAS 198 (253)
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhh
Confidence 999999999999999999999999999999998653
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-35 Score=234.30 Aligned_cols=184 Identities=27% Similarity=0.280 Sum_probs=161.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|++++.+...+++. .+.++.+|++|.++++++++++.+.+ +++|
T Consensus 27 k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~-~~iD 101 (315)
T PRK06196 27 KTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG-RRID 101 (315)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC-CCCC
Confidence 689999999999999999999999999999999888877766653 37789999999999999999999887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc------------CCCCCh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIPSVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~~~~ 148 (202)
++|||||.... ..+.+.++|+..+++|+.|++.+++.++|.|.+++.++||++||..... +.++..
T Consensus 102 ~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
T PRK06196 102 ILINNAGVMAC--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWL 179 (315)
T ss_pred EEEECCCCCCC--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence 99999997532 2345678899999999999999999999999887678999999975432 334567
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
.|++||++++.+++.++.++.+.||++++|+||+++|++....
T Consensus 180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~ 222 (315)
T PRK06196 180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHL 222 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccC
Confidence 8999999999999999999998999999999999999987543
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=237.08 Aligned_cols=185 Identities=22% Similarity=0.252 Sum_probs=148.2
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH----------hcCC-----eEEEEEecCCC---
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK----------NKGF-----KVTGSVCDLSS--- 60 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~----------~~~~-----~v~~~~~Dv~~--- 60 (202)
|++||||++ +|||+++|++|+++|++|++.++.+ .++...+... ..+. .+..+..|+++
T Consensus 9 k~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~ 87 (299)
T PRK06300 9 KIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPED 87 (299)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCEE
Confidence 789999996 9999999999999999999977542 1111100000 0000 01111222222
Q ss_pred ---------------HHHHHHHHHHHHHHhCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHH
Q 028868 61 ---------------REQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123 (202)
Q Consensus 61 ---------------~~~i~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 123 (202)
..+++++++++.+++ +++|++|||||... ..++.+.+.++|++.+++|+.|++.++++++|+
T Consensus 88 v~~~i~~~~~~~~~~~~si~~~~~~v~~~~-G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~ 166 (299)
T PRK06300 88 VPEEIRENKRYKDLSGYTISEVAEQVKKDF-GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI 166 (299)
T ss_pred eecccCccccccCCCHHHHHHHHHHHHHHc-CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 346999999999998 79999999999753 467889999999999999999999999999999
Q ss_pred HhcCCCCeEEEecCCCCccCCCCCh-hhhhhHHHHHHHHHHHHHHHcc-CCcEEEEeeCCcccCCCcc
Q 028868 124 FKASGNGSIVFISSVGGVRGIPSVS-LYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 124 ~~~~~~~~iv~vsS~~~~~~~~~~~-~y~asK~a~~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~ 189 (202)
|++ .|+|++++|..+..+.|++. .|++||+++.+|+++|+.|+++ .|||||+|+||+++|++..
T Consensus 167 m~~--~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~ 232 (299)
T PRK06300 167 MNP--GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK 232 (299)
T ss_pred hhc--CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhh
Confidence 975 47999999999988888875 8999999999999999999986 4999999999999999864
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=223.47 Aligned_cols=186 Identities=26% Similarity=0.350 Sum_probs=168.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+++||+++|++|+++|++|+++.|+. ...+...+++...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus 6 ~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 84 (245)
T PRK12937 6 KVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF-GRI 84 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999998877654 44555666666667789999999999999999999999998 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++||+||.....++.+.+.++++.++++|+.+++.++++++|.|++ .++||++||..+..+.|+...|+++|++++.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~ 162 (245)
T PRK12937 85 DVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVIALPLPGYGPYAASKAAVEG 162 (245)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccccCCCCCCchhHHHHHHHHH
Confidence 99999999877677788899999999999999999999999999964 5799999999998999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++.++.++.+.|++++.|+||+++|+++.
T Consensus 163 ~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~ 192 (245)
T PRK12937 163 LVHVLANELRGRGITVNAVAPGPVATELFF 192 (245)
T ss_pred HHHHHHHHhhhcCeEEEEEEeCCccCchhc
Confidence 999999999999999999999999999853
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=224.03 Aligned_cols=188 Identities=28% Similarity=0.375 Sum_probs=166.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||++|||.+++++|+++|++|+++ .|++++++...+++...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 81 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAF-GRL 81 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence 689999999999999999999999999876 467777777777776667789999999999999999999998887 789
Q ss_pred cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC---CCeEEEecCCCCccCCCC-ChhhhhhH
Q 028868 80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPS-VSLYGAYK 154 (202)
Q Consensus 80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~-~~~y~asK 154 (202)
|++||+||.... .++.+.+.++++..+++|+.+++.+++.+++.|..++ .++||++||.++..+.+. ...|+++|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK 161 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence 999999997643 4567788999999999999999999999999887543 578999999988877664 57899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++++++++.++.+.||+|+.|+||+++|++..
T Consensus 162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~ 196 (248)
T PRK06947 162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHA 196 (248)
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeccCccccccc
Confidence 99999999999999988999999999999999864
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=225.95 Aligned_cols=186 Identities=25% Similarity=0.383 Sum_probs=160.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC----hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN----QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~----~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++||||++|||+++|++|+++|++|++++++ .+..+...+++...+.++.++.+|++++++++++++++.+.+
T Consensus 9 k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 87 (257)
T PRK12744 9 KVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF- 87 (257)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh-
Confidence 689999999999999999999999997766543 344555566665556678899999999999999999999988
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEe-cCCCCccCCCCChhhhhhHH
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFI-SSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~v-sS~~~~~~~~~~~~y~asK~ 155 (202)
+++|++|||||.....++.+.+.+++++.+++|+.+++.++++++|+|++ .++++++ ||..+ .+.++...|++||+
T Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~-~~~~~~~~Y~~sK~ 164 (257)
T PRK12744 88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLG-AFTPFYSAYAGSKA 164 (257)
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhc-ccCCCcccchhhHH
Confidence 78999999999876677788899999999999999999999999999965 3677776 44433 34577889999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.|+++++.|+.+.||+|++++||+++|++..+
T Consensus 165 a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~ 199 (257)
T PRK12744 165 PVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYP 199 (257)
T ss_pred HHHHHHHHHHHHhCcCceEEEEEecCccccchhcc
Confidence 99999999999999999999999999999998643
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=221.63 Aligned_cols=190 Identities=35% Similarity=0.405 Sum_probs=172.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+++||++++++|+++|++|+++.| +++.......++...+.++.++.+|++++++++++++++.+.+ +++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL-GPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 79999999999999999999999999999888 6666666666655556678999999999999999999999887 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+|||++|.....++.+.+.+++++.++.|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.
T Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~ 159 (242)
T TIGR01829 80 DVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG 159 (242)
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence 99999999877667778899999999999999999999999999988777899999999988888899999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++.++.++.+.|++++.++||+++|++....
T Consensus 160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~ 191 (242)
T TIGR01829 160 FTKALAQEGATKGVTVNTISPGYIATDMVMAM 191 (242)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCCCcCcccccc
Confidence 99999999988999999999999999987643
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-35 Score=233.68 Aligned_cols=188 Identities=27% Similarity=0.259 Sum_probs=162.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||+++|++|+++|++|++++|+.++.....+++... +.++.++.+|++|.++++++++++.+.+ ++
T Consensus 17 k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~ 95 (306)
T PRK06197 17 RVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY-PR 95 (306)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC-CC
Confidence 68999999999999999999999999999999988887777766543 4568899999999999999999999988 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-------------CCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-------------GIP 145 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-------------~~~ 145 (202)
+|++|||||.... ..+.+.++++..+++|+.|++.+++.++|.|++.+.++||++||..+.. +.+
T Consensus 96 iD~li~nAg~~~~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~ 173 (306)
T PRK06197 96 IDLLINNAGVMYT--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYN 173 (306)
T ss_pred CCEEEECCccccC--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCC
Confidence 9999999997543 2346678899999999999999999999999887778999999986433 234
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEe--eCCcccCCCccch
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV--APWVIKTSMIKPF 191 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v--~pG~v~t~~~~~~ 191 (202)
+...|++||++++.+++.++.++.+.|++++++ +||+|+|++.+..
T Consensus 174 ~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~ 221 (306)
T PRK06197 174 RVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNL 221 (306)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccC
Confidence 567899999999999999999998888776655 7999999998754
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=223.80 Aligned_cols=187 Identities=31% Similarity=0.434 Sum_probs=169.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++||||++|||++++++|+++|++|++++|+ ++.++...+++.... ..+..+.+|++|.++++++++++.+.+ +++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 80 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAM-GGL 80 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHc-CCc
Confidence 7999999999999999999999999999998 666766666665432 245678899999999999999999988 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++||+||.....++.+.+.++++.++++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~ 160 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS 160 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence 99999999887777888899999999999999999999999999998777899999999999999999999999999999
Q ss_pred HHHHHHHHHccCC--cEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDN--IRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~g--i~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+.+.+ |+++.|+||+++|++..+
T Consensus 161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~ 193 (251)
T PRK07069 161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDP 193 (251)
T ss_pred HHHHHHHHhcccCCcEEEEEEeecccCCcchhH
Confidence 9999999997654 999999999999998764
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=228.02 Aligned_cols=187 Identities=32% Similarity=0.431 Sum_probs=167.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||++++++|+++|++|++++|+.+ ..+...+.+...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus 47 k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~-~~i 125 (290)
T PRK06701 47 KVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL-GRL 125 (290)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999854 3445555555556778999999999999999999999987 789
Q ss_pred cEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++|||||... ..++.+.+.++|+..+++|+.+++.++++++++|++ .+++|++||..+..+.++...|+++|++++
T Consensus 126 D~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~ 203 (290)
T PRK06701 126 DILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGYEGNETLIDYSATKGAIH 203 (290)
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEecccccCCCCCcchhHHHHHHHH
Confidence 99999999763 356778899999999999999999999999999964 479999999999999898999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++++.++.++||++++|+||+++|++...
T Consensus 204 ~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~ 235 (290)
T PRK06701 204 AFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPS 235 (290)
T ss_pred HHHHHHHHHhhhcCeEEEEEecCCCCCccccc
Confidence 99999999999899999999999999997653
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=222.97 Aligned_cols=186 Identities=28% Similarity=0.337 Sum_probs=167.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+++..+...+++.+.+..+..+.+|+++.++++++++++.+.+ +++|
T Consensus 7 k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 85 (250)
T PRK07774 7 KVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAF-GGID 85 (250)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999887777777776656678889999999999999999999998 6899
Q ss_pred EEEEcCCCCC---CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 81 ILINNAAIAF---VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|||++|... ..++.+.+.+++++.+++|+.+++.++++++|+|.+.+.++||++||..+.. +.+.|++||+++
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~sK~a~ 162 (250)
T PRK07774 86 YLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLAKVGL 162 (250)
T ss_pred EEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHHHHHH
Confidence 9999999863 3456678899999999999999999999999999877778999999987654 357899999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+.++++++.++.+.||+++.++||+++|++...
T Consensus 163 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 195 (250)
T PRK07774 163 NGLTQQLARELGGMNIRVNAIAPGPIDTEATRT 195 (250)
T ss_pred HHHHHHHHHHhCccCeEEEEEecCcccCccccc
Confidence 999999999999889999999999999998754
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=222.35 Aligned_cols=184 Identities=24% Similarity=0.374 Sum_probs=166.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||.+++++|+++|++|++++|+++++....+.+ +.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~-~~id 76 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEW-RNID 76 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999988776655543 3468889999999999999999998887 7899
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++||++|... ..+..+.+.+++++++++|+.|++.+++.++|.|.+++.+++|++||..+..+.++...|+++|+++++
T Consensus 77 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 156 (248)
T PRK10538 77 VLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence 9999999753 346677899999999999999999999999999988777899999999998888899999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+++.++.++.++||+++.|+||++.|+++
T Consensus 157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~ 185 (248)
T PRK10538 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEF 185 (248)
T ss_pred HHHHHHHHhcCCCcEEEEEeCCeeccccc
Confidence 99999999999999999999999985543
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=226.14 Aligned_cols=186 Identities=23% Similarity=0.317 Sum_probs=169.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+++.+....+.. +.++.++.+|++|.+++.++++++.+.+ +++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 78 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAAL-GRID 78 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999987766554433 3468889999999999999999988887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+|||+||.....+..+.+.++++..+++|+.+++.+++.++|+|++++.++||++||..+..+.|+...|++||++++.+
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 158 (276)
T PRK06482 79 VVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGF 158 (276)
T ss_pred EEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHH
Confidence 99999999877777888899999999999999999999999999887788999999999888889999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.++.+.|++++.++||++.|++...
T Consensus 159 ~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~ 188 (276)
T PRK06482 159 VEAVAQEVAPFGIEFTIVEPGPARTNFGAG 188 (276)
T ss_pred HHHHHHHhhccCcEEEEEeCCccccCCccc
Confidence 999999998899999999999999988643
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-34 Score=225.66 Aligned_cols=188 Identities=22% Similarity=0.319 Sum_probs=172.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|+.+.++...+++...+.++.++.+|+++++++.++++++.+.+ +++|
T Consensus 11 ~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 89 (274)
T PRK07775 11 RPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEAL-GEIE 89 (274)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 589999999999999999999999999999999888777777776666778899999999999999999998887 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||+||.....+..+.+.+++++.+++|+.+++.+++.++|.|.++..++||++||..+..+.++...|+++|++++.+
T Consensus 90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l 169 (274)
T PRK07775 90 VLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAM 169 (274)
T ss_pred EEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHHHH
Confidence 99999998766677778999999999999999999999999999877778999999999888888889999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.++.++.+.||++++++||+++|++..
T Consensus 170 ~~~~~~~~~~~gi~v~~v~pG~~~t~~~~ 198 (274)
T PRK07775 170 VTNLQMELEGTGVRASIVHPGPTLTGMGW 198 (274)
T ss_pred HHHHHHHhcccCeEEEEEeCCcccCcccc
Confidence 99999999888999999999999998653
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=226.95 Aligned_cols=179 Identities=30% Similarity=0.378 Sum_probs=160.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++++++... ..++.++.+|++|+++++++++++.+.+ +++|
T Consensus 10 k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 79 (266)
T PRK06171 10 KIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF-GRID 79 (266)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999875432 1357889999999999999999999998 7999
Q ss_pred EEEEcCCCCCCC---------CCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhh
Q 028868 81 ILINNAAIAFVK---------PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG 151 (202)
Q Consensus 81 ~vi~~ag~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~ 151 (202)
++|||||..... +..+.+.++|+.++++|+.+++.+++++.|+|.+++.++||++||..+..+.++...|+
T Consensus 80 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 159 (266)
T PRK06171 80 GLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYA 159 (266)
T ss_pred EEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhH
Confidence 999999975332 23457899999999999999999999999999887779999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCccc-CCCcc
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK-TSMIK 189 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~-t~~~~ 189 (202)
++|+++++++++++.|+++.||+||+|+||+++ |++..
T Consensus 160 ~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~ 198 (266)
T PRK06171 160 ATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRT 198 (266)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcC
Confidence 999999999999999999999999999999997 66643
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=221.97 Aligned_cols=188 Identities=30% Similarity=0.360 Sum_probs=165.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+++||.+++++|+++|++|+++. |++++.+...+.+...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 81 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDREL-GRL 81 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHh-CCC
Confidence 5899999999999999999999999998876 45566666666666666678899999999999999999999988 799
Q ss_pred cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC---CCCeEEEecCCCCccCCCC-ChhhhhhH
Q 028868 80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIPS-VSLYGAYK 154 (202)
Q Consensus 80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~-~~~y~asK 154 (202)
|++||+||.... .++.+.+.++|+..+++|+.+++.+++.+++.|.++ +.++|+++||..+..+.++ ...|+++|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK 161 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence 999999998643 456778899999999999999999999999999754 2578999999988888776 36799999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++++++++.++.+.||+++.|+||++.|++..
T Consensus 162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~ 196 (248)
T PRK06123 162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHA 196 (248)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhh
Confidence 99999999999999989999999999999999754
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=222.02 Aligned_cols=186 Identities=32% Similarity=0.370 Sum_probs=169.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|+.|++.+|+.++++...+.+ +.++.++.+|+++.++++++++++.+.+ +++|
T Consensus 7 ~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 82 (245)
T PRK12936 7 RKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL-EGVD 82 (245)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999987777655443 3468889999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|+.++++|+.+++.+++++.+.+.+++.+++|++||..+..+.++...|+++|+++..+
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~ 162 (245)
T PRK12936 83 ILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGF 162 (245)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHH
Confidence 99999998776777788899999999999999999999999988776678999999999999989999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.++.+.|+++++++||+++|++..+
T Consensus 163 ~~~la~~~~~~~i~v~~i~pg~~~t~~~~~ 192 (245)
T PRK12936 163 SKSLAQEIATRNVTVNCVAPGFIESAMTGK 192 (245)
T ss_pred HHHHHHHhhHhCeEEEEEEECcCcCchhcc
Confidence 999999998889999999999999998754
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=226.34 Aligned_cols=185 Identities=23% Similarity=0.242 Sum_probs=155.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHH----HHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-GFKVTGSVCDLSSREQR----EKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i----~~~~~~~~~~ 74 (202)
++++||||++|||++++++|+++|++|++++| ++++++...+++... +..+.++.+|++|++++ +++++++.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 57999999999999999999999999998765 566777776666432 44677899999999866 4555666666
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCH-----------HHHHHHHHHHhHhHHHHHHHHhHHHhcC------CCCeEEEecC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITA-----------EDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISS 137 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS 137 (202)
+ +++|+||||||.....++.+.+. ++|++++++|+.+++.++++++|+|+.. ..+.|++++|
T Consensus 82 ~-g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s 160 (267)
T TIGR02685 82 F-GRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD 160 (267)
T ss_pred c-CCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence 6 68999999999865555444333 3589999999999999999999999643 2468999999
Q ss_pred CCCccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 138 VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 138 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
..+..+.++..+|++||+++++++++++.|+.+.||+|++|+||+++|+
T Consensus 161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~ 209 (267)
T TIGR02685 161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLP 209 (267)
T ss_pred hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence 9999889999999999999999999999999999999999999999766
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-34 Score=225.47 Aligned_cols=187 Identities=25% Similarity=0.316 Sum_probs=171.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++|++|++++|+++..+...+++... +.++.++.+|++|++++++ ++++.+.+ ++
T Consensus 4 k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~-~~ 81 (280)
T PRK06914 4 KIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI-GR 81 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc-CC
Confidence 67999999999999999999999999999999988887776666543 3468899999999999999 88888887 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++||++|........+.+.+++++.+++|+.+++.+++.++|.|++.+.++||++||..+..+.++...|+++|++++
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~ 161 (280)
T PRK06914 82 IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALE 161 (280)
T ss_pred eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHH
Confidence 99999999987777777889999999999999999999999999998777789999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.++++++.++.+.||+++.++||+++|+++.
T Consensus 162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~ 192 (280)
T PRK06914 162 GFSESLRLELKPFGIDVALIEPGSYNTNIWE 192 (280)
T ss_pred HHHHHHHHHhhhhCCEEEEEecCCcccchhh
Confidence 9999999999889999999999999999765
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-34 Score=220.99 Aligned_cols=187 Identities=24% Similarity=0.296 Sum_probs=169.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||++|||++++++|+++|++|++++|++++.+...+++... +.++.++++|++++++++++++++.+ ++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~----~~ 77 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA----LP 77 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh----cC
Confidence 68999999999999999999999999999999998877776666443 45789999999999999999888753 46
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++||++|.....+..+.+.+++.+.+++|+.+++.+++++.|+|.+++.+++|++||..+..+.++...|+++|+++.+
T Consensus 78 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 157 (243)
T PRK07102 78 DIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA 157 (243)
T ss_pred CEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence 99999999876667778899999999999999999999999999998778999999999998888999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++.|+.+.||++++|+||+++|++....
T Consensus 158 ~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~ 189 (243)
T PRK07102 158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL 189 (243)
T ss_pred HHHHHHHHhhccCcEEEEEecCcccChhhhcc
Confidence 99999999999999999999999999987653
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-34 Score=222.78 Aligned_cols=180 Identities=26% Similarity=0.334 Sum_probs=166.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+++||++++++|+++|++|++++|+. +...+.++.++.+|++++++++++++++.+.+ +++|
T Consensus 9 k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 78 (252)
T PRK08220 9 KTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLAET-GPLD 78 (252)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999999999986 12235568899999999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||+|.....++.+.+.++++..+++|+.+++.+++++.|.|++++.++||++||..+..+.++...|+++|++++.+
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~ 158 (252)
T PRK08220 79 VLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSL 158 (252)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHH
Confidence 99999998877788888999999999999999999999999999887778999999999998888999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.|+.+.||+|+.++||+++|++...
T Consensus 159 ~~~la~e~~~~~i~v~~i~pg~v~t~~~~~ 188 (252)
T PRK08220 159 AKCVGLELAPYGVRCNVVSPGSTDTDMQRT 188 (252)
T ss_pred HHHHHHHhhHhCeEEEEEecCcCcchhhhh
Confidence 999999999999999999999999998654
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=222.48 Aligned_cols=187 Identities=31% Similarity=0.396 Sum_probs=172.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+++||++++++|+++|++ |++++|+.++.....+++...+.++.++.+|+++++++.++++.+.+.+ +++
T Consensus 7 k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i 85 (260)
T PRK06198 7 KVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF-GRL 85 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh-CCC
Confidence 68999999999999999999999998 9999999888777777776667788899999999999999999999988 689
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++||++|.....++.+.+.++++.++++|+.+++.+++.++|+|.+++ .+++|++||..+..+.++...|+++|++++
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~ 165 (260)
T PRK06198 86 DALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALA 165 (260)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHH
Confidence 9999999987767777889999999999999999999999999997653 589999999998888888899999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.++++++.|+.+.||+++.|+||+++|++.
T Consensus 166 ~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~ 195 (260)
T PRK06198 166 TLTRNAAYALLRNRIRVNGLNIGWMATEGE 195 (260)
T ss_pred HHHHHHHHHhcccCeEEEEEeeccccCcch
Confidence 999999999999999999999999999874
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=220.90 Aligned_cols=174 Identities=22% Similarity=0.222 Sum_probs=149.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++||||++|||++++++|+++|++|++++|+.++++...+++ ++..+.+|++++++++++++++. .++|
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~----~~id 71 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFP----HHLD 71 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHh----hcCc
Confidence 57999999999999999999999999999999988877665544 35678899999999999888764 3689
Q ss_pred EEEEcCCCCCC------CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 81 ILINNAAIAFV------KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 81 ~vi~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
++|||+|.... .++.+ +.++|++++++|+.+++.++++++|.|++ .|+||++||.+ .++...|+++|
T Consensus 72 ~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~----~~~~~~Y~asK 144 (223)
T PRK05884 72 TIVNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN----PPAGSAEAAIK 144 (223)
T ss_pred EEEECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC----CCCccccHHHH
Confidence 99999985321 12333 57899999999999999999999999964 48999999976 35568899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.+|+++++.|+.++||+||+|+||+++|++...
T Consensus 145 aal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~ 180 (223)
T PRK05884 145 AALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG 180 (223)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh
Confidence 999999999999999999999999999999997643
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=222.23 Aligned_cols=189 Identities=30% Similarity=0.405 Sum_probs=168.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+++||++++++|+++|++|++++|+. +......+.+...+.++.++.+|+++++++.++++.+.+.+ +++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 81 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAW-GRI 81 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhc-CCC
Confidence 6899999999999999999999999999999864 45555666665556678999999999999999999999998 789
Q ss_pred cEEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC------CCeEEEecCCCCccCCCCChhhh
Q 028868 80 NILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVRGIPSVSLYG 151 (202)
Q Consensus 80 d~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~vsS~~~~~~~~~~~~y~ 151 (202)
|++|||+|... ..++.+.+.++++..+++|+.+++.+++++.+.|.++. .++||++||..+..+.++.+.|+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 161 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC 161 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence 99999999753 34567788999999999999999999999999998653 35799999999999989999999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++|++++.+++.++.++.+.|++++.|+||+++|++...
T Consensus 162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~ 200 (256)
T PRK12745 162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP 200 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc
Confidence 999999999999999999899999999999999998653
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=223.64 Aligned_cols=185 Identities=27% Similarity=0.369 Sum_probs=163.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||.+++++|+++|++|++++|+..+++...+++. ..++.+|++++++++++++++.+.+ +++|
T Consensus 8 ~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 81 (255)
T PRK06057 8 RVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY-GSVD 81 (255)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999877666555442 2578899999999999999998887 7899
Q ss_pred EEEEcCCCCCC--CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-CCChhhhhhHHHH
Q 028868 81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~~~y~asK~a~ 157 (202)
++||+||.... .++.+.+.+.+++.+++|+.+++.+++.++|+|.+++.++||++||..+..+. ++...|+++|+++
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal 161 (255)
T PRK06057 82 IAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGV 161 (255)
T ss_pred EEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHH
Confidence 99999997632 35667789999999999999999999999999987777899999998777665 4678899999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.++.++.++||++++|+||+++|++....
T Consensus 162 ~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~ 195 (255)
T PRK06057 162 LAMSRELGVQFARQGIRVNALCPGPVNTPLLQEL 195 (255)
T ss_pred HHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhh
Confidence 9999999999998899999999999999987543
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=221.31 Aligned_cols=186 Identities=25% Similarity=0.264 Sum_probs=166.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||++++++|+++|++|+++++ +.+.++...+++...+.++.++.+|++|.+++.++++++.+.+ +++
T Consensus 10 k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-~~i 88 (258)
T PRK09134 10 RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL-GPI 88 (258)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999988766 4556666666666666778999999999999999999999888 689
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||||.....++.+.+.++++..+++|+.+++.+++.+.++|.++..+++|+++|..+..+.|+...|+++|++++.
T Consensus 89 D~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~ 168 (258)
T PRK09134 89 TLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWT 168 (258)
T ss_pred CEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHHH
Confidence 99999999877777788899999999999999999999999999987767899999998777777888899999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+++.++.++.+. |+|++|+||++.|+..
T Consensus 169 ~~~~la~~~~~~-i~v~~i~PG~v~t~~~ 196 (258)
T PRK09134 169 ATRTLAQALAPR-IRVNAIGPGPTLPSGR 196 (258)
T ss_pred HHHHHHHHhcCC-cEEEEeecccccCCcc
Confidence 999999999765 9999999999988653
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=213.32 Aligned_cols=198 Identities=27% Similarity=0.329 Sum_probs=163.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCE-EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-G 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~-Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~ 77 (202)
|+++||||++|||+.+.++|.+. |-+ ++.++|++++..+..+.......+++.+++|+++.+++.++++++.+..+ .
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 57999999999999999999976 444 45677888876444443333367899999999999999999999998742 3
Q ss_pred CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC-----------CeEEEecCCCCccC--
Q 028868 78 KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-----------GSIVFISSVGGVRG-- 143 (202)
Q Consensus 78 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-----------~~iv~vsS~~~~~~-- 143 (202)
.+|+++||||+.. .....+.+.+.|.+.+++|..|++.+.|+|+|++++... ..||++||..+..+
T Consensus 84 GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~ 163 (249)
T KOG1611|consen 84 GLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGF 163 (249)
T ss_pred CceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCC
Confidence 6999999999873 344556778999999999999999999999999986432 47999999876643
Q ss_pred -CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhhhcccc
Q 028868 144 -IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVLSVGI 198 (202)
Q Consensus 144 -~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~ 198 (202)
..+..+|..||+|+.+|+|+++.|+.+.+|-|.++|||||+|+|...--...++.
T Consensus 164 ~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~~a~ltvee 219 (249)
T KOG1611|consen 164 RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGKKAALTVEE 219 (249)
T ss_pred CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCCCcccchhh
Confidence 3356789999999999999999999999999999999999999998655544443
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=221.66 Aligned_cols=189 Identities=31% Similarity=0.434 Sum_probs=173.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|++++.+...+++...+.++.++.+|++|.++++++++.+.+.+ +++|
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 80 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARF-GGID 80 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999888887777777667788899999999999999999998888 6899
Q ss_pred EEEEcCCCCCCCCCCCC-CHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDI-TAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++||++|.....++.+. +.+++++.+++|+.+++.+++.++|+|.++ .+++|++||..+..+.++...|+++|++++.
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~ 159 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHG 159 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHHH
Confidence 99999998777777777 899999999999999999999999999765 5899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++.++.++.+.|++++++.||+++|++....
T Consensus 160 ~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~ 191 (263)
T PRK06181 160 FFDSLRIELADDGVAVTVVCPGFVATDIRKRA 191 (263)
T ss_pred HHHHHHHHhhhcCceEEEEecCccccCcchhh
Confidence 99999999998999999999999999987643
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=209.66 Aligned_cols=163 Identities=42% Similarity=0.556 Sum_probs=153.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC--hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN--QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~--~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+++||||++|||++++++|+++|. +|++++|+ .+..+...+++...+.++.++++|++++++++++++++.+.+ +
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 79 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRF-G 79 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccc-c
Confidence 7999999999999999999999965 78899998 778888888888888999999999999999999999999887 7
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
++|++|||+|.....++.+.+.++|+.++++|+.+++.+.+.++| ++.++||++||..+..+.|+...|+++|+++
T Consensus 80 ~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS~~~~~~~~~~~~Y~askaal 155 (167)
T PF00106_consen 80 PLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISSIAGVRGSPGMSAYSASKAAL 155 (167)
T ss_dssp SESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHH
T ss_pred cccccccccccccccccccccchhhhhccccccceeeeeeehhee----ccccceEEecchhhccCCCCChhHHHHHHHH
Confidence 999999999999888899999999999999999999999999999 3479999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 028868 158 NQLTKNLACEW 168 (202)
Q Consensus 158 ~~~~~~la~e~ 168 (202)
++|+++++.|+
T Consensus 156 ~~~~~~la~e~ 166 (167)
T PF00106_consen 156 RGLTQSLAAEL 166 (167)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 99999999996
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-33 Score=220.90 Aligned_cols=187 Identities=29% Similarity=0.328 Sum_probs=163.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||+++|++|+++|++|++++|++++++...+++... +..+.++.+|++|++++.++++++.+.+ ++
T Consensus 5 k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~-~~ 83 (256)
T PRK09186 5 KTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY-GK 83 (256)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence 68999999999999999999999999999999998888887777432 2346677999999999999999999988 78
Q ss_pred ccEEEEcCCCCC---CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC----------
Q 028868 79 LNILINNAAIAF---VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP---------- 145 (202)
Q Consensus 79 id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------- 145 (202)
+|++|||||... ..++.+.+.++++..+++|+.+++.++++++|.|++++.++||++||.++..+..
T Consensus 84 id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~ 163 (256)
T PRK09186 84 IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMT 163 (256)
T ss_pred ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccC
Confidence 999999998542 3467788999999999999999999999999999887778999999987654321
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
....|+++|++++++++.++.|+.+.||+++.|+||++.++..
T Consensus 164 ~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~ 206 (256)
T PRK09186 164 SPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP 206 (256)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC
Confidence 2246999999999999999999999999999999999988754
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=227.85 Aligned_cols=189 Identities=19% Similarity=0.178 Sum_probs=161.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+.++++...+++...+.++.++.+|+++.++++++++++.+.+ +++|
T Consensus 7 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-~~iD 85 (322)
T PRK07453 7 GTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG-KPLD 85 (322)
T ss_pred CEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC-CCcc
Confidence 689999999999999999999999999999999988888887775445578899999999999999999987765 6899
Q ss_pred EEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC--CeEEEecCCCCcc---------------
Q 028868 81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN--GSIVFISSVGGVR--------------- 142 (202)
Q Consensus 81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~vsS~~~~~--------------- 142 (202)
+||||||+... .+..+.+.++++..+++|+.|++.+++.++|.|++++. ++||++||.....
T Consensus 86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~ 165 (322)
T PRK07453 86 ALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADL 165 (322)
T ss_pred EEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccch
Confidence 99999997532 22345688999999999999999999999999987643 6999999965321
Q ss_pred --------------------CCCCChhhhhhHHHHHHHHHHHHHHHc-cCCcEEEEeeCCcc-cCCCccc
Q 028868 143 --------------------GIPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVI-KTSMIKP 190 (202)
Q Consensus 143 --------------------~~~~~~~y~asK~a~~~~~~~la~e~~-~~gi~v~~v~pG~v-~t~~~~~ 190 (202)
+..+...|+.||.+...+++.+++++. ..||++++++||+| .|++.++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~ 235 (322)
T PRK07453 166 GDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN 235 (322)
T ss_pred hhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence 112346799999999999999999995 46899999999999 5888654
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=249.08 Aligned_cols=189 Identities=27% Similarity=0.373 Sum_probs=172.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+++.++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 372 k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id 450 (657)
T PRK07201 372 KVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH-GHVD 450 (657)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999998888888887667789999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCC--CHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFVKPTVDI--TAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
++|||||......+.+. +.++++.++++|+.|++.+++.++|.|++++.++||++||.++..+.++.+.|+++|++++
T Consensus 451 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 530 (657)
T PRK07201 451 YLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALD 530 (657)
T ss_pred EEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHH
Confidence 99999997644333322 3578999999999999999999999999887899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++.|+.+.||+|++|+||+|+|++..+
T Consensus 531 ~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~ 562 (657)
T PRK07201 531 AFSDVAASETLSDGITFTTIHMPLVRTPMIAP 562 (657)
T ss_pred HHHHHHHHHHHhhCCcEEEEECCcCcccccCc
Confidence 99999999999999999999999999999764
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=219.52 Aligned_cols=188 Identities=34% Similarity=0.426 Sum_probs=168.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC---
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ--- 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~--- 76 (202)
|+++||||+|+||+++|++|+++|++|+++ .|+.++++...+.+...+..+.++.+|++|.+++.++++++.+.++
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~ 86 (254)
T PRK12746 7 KVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRV 86 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcccc
Confidence 589999999999999999999999998775 7887777777766655556788999999999999999999988762
Q ss_pred --CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 77 --GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 77 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+++|++||+||.....++.+.+.+.|+..+++|+.+++.+++.++|.|.+ .+++|++||..+..+.++...|+++|
T Consensus 87 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~~~~~~~~~~Y~~sK 164 (254)
T PRK12746 87 GTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEVRLGFTGSIAYGLSK 164 (254)
T ss_pred CCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHhcCCCCCCcchHhhH
Confidence 36999999999877777788899999999999999999999999999865 37999999999888889999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++.++++++.++.+.|++++.++||+++|++...
T Consensus 165 ~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~ 200 (254)
T PRK12746 165 GALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAK 200 (254)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhh
Confidence 999999999999999899999999999999998754
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=221.68 Aligned_cols=189 Identities=26% Similarity=0.334 Sum_probs=170.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++|++|++++|++++.+...+++... +.++.++.+|++|+++++++++++.+.+ ++
T Consensus 8 k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 86 (276)
T PRK05875 8 RTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWH-GR 86 (276)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence 68999999999999999999999999999999988877777666543 3468899999999999999999999988 78
Q ss_pred ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|++||++|... ..++.+.+.++++..+++|+.+++.+++++.+.|.+++.++|+++||..+..+.++...|+++|+++
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 166 (276)
T PRK05875 87 LHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAV 166 (276)
T ss_pred CCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHHH
Confidence 999999999753 3566778899999999999999999999999999876678999999999888888899999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+.+++.++.++...+|+++.|+||+++|++...
T Consensus 167 ~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~ 199 (276)
T PRK05875 167 DHLMKLAADELGPSWVRVNSIRPGLIRTDLVAP 199 (276)
T ss_pred HHHHHHHHHHhcccCeEEEEEecCccCCccccc
Confidence 999999999999899999999999999998754
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=225.95 Aligned_cols=185 Identities=33% Similarity=0.350 Sum_probs=164.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||+++|++|+.+|++|++.+|+.++.+++.+.+... ..++.++++|+++.++|.++.++.+..+ ++
T Consensus 36 ~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~-~~ 114 (314)
T KOG1208|consen 36 KVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE-GP 114 (314)
T ss_pred cEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC-CC
Confidence 68999999999999999999999999999999999999999988753 4568889999999999999999999887 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-------------CC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------IP 145 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------~~ 145 (202)
+|++|||||+..... ..+.|.+|..+.+|.+|++.+++.++|.|++..++|||++||...... +.
T Consensus 115 ldvLInNAGV~~~~~--~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~ 192 (314)
T KOG1208|consen 115 LDVLINNAGVMAPPF--SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYS 192 (314)
T ss_pred ccEEEeCcccccCCc--ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCcc
Confidence 999999999975433 678889999999999999999999999999887799999999775110 22
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC-Ccc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS-MIK 189 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~-~~~ 189 (202)
....|+.||.+...+++.|++++.. ||.+++++||.+.|+ +.+
T Consensus 193 ~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 193 SDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred chhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceec
Confidence 3335999999999999999999977 999999999999999 444
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=216.59 Aligned_cols=191 Identities=39% Similarity=0.501 Sum_probs=175.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+++||++++++|+++|++|+++ +|++++.+...+.+...+.++.++.+|+++.++++++++.+.+.+ +++
T Consensus 6 ~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 84 (247)
T PRK05565 6 KVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF-GKI 84 (247)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCC
Confidence 589999999999999999999999999998 999888877777776656678999999999999999999998887 689
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++||++|.....+..+.+.++++..+++|+.+++.+++.+.|.+.+++.+++|++||..+..+.+....|+.+|+++..
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~ 164 (247)
T PRK05565 85 DILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNA 164 (247)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHHHH
Confidence 99999999876667778899999999999999999999999999988778899999999998888899999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++.++.++.++|++++.++||+++|++.+...
T Consensus 165 ~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~ 197 (247)
T PRK05565 165 FTKALAKELAPSGIRVNAVAPGAIDTEMWSSFS 197 (247)
T ss_pred HHHHHHHHHHHcCeEEEEEEECCccCccccccC
Confidence 999999999889999999999999999876544
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-33 Score=217.55 Aligned_cols=180 Identities=22% Similarity=0.271 Sum_probs=158.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|++++++...+. ..++.++.+|+++.++++++++++. ..+|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~----~~~d 73 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ----SANIFTLAFDVTDHPGTKAALSQLP----FIPE 73 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh----cCCCeEEEeeCCCHHHHHHHHHhcc----cCCC
Confidence 6899999999999999999999999999999998766554332 3457889999999999999988763 2479
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
.+|||+|.....+..+.+.++|++++++|+.|++.+++.+.|+|.+ .+++|++||..+..+.++...|+++|++++++
T Consensus 74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 151 (240)
T PRK06101 74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC--GHRVVIVGSIASELALPRAEAYGASKAAVAYF 151 (240)
T ss_pred EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc--CCeEEEEechhhccCCCCCchhhHHHHHHHHH
Confidence 9999999754444456788999999999999999999999999964 46899999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.|+.++|+++++++||+++|++...
T Consensus 152 ~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~ 181 (240)
T PRK06101 152 ARTLQLDLRPKGIEVVTVFPGFVATPLTDK 181 (240)
T ss_pred HHHHHHHHHhcCceEEEEeCCcCCCCCcCC
Confidence 999999999999999999999999998764
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=215.90 Aligned_cols=191 Identities=34% Similarity=0.428 Sum_probs=170.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC----ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR----NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r----~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++||||+|+||+++|++|+++|++|++++| +++..+...+++...+.++.++.+|+++.++++++++++.+.+
T Consensus 7 ~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~- 85 (249)
T PRK12827 7 RRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF- 85 (249)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence 57999999999999999999999999998665 4455555666666556778999999999999999999998887
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHh-HHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH-PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
+++|++||++|.....++.+.+.++|+..+++|+.+++.+++.+. +.|++++.+++|++||..+..+.++...|+.+|+
T Consensus 86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~ 165 (249)
T PRK12827 86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKA 165 (249)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHHH
Confidence 689999999998877788888999999999999999999999999 7777666789999999999888889999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++.+++.++.++.+.|++++.++||+++|++..+..
T Consensus 166 a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~ 202 (249)
T PRK12827 166 GLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA 202 (249)
T ss_pred HHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc
Confidence 9999999999999888999999999999999876543
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=216.00 Aligned_cols=189 Identities=31% Similarity=0.383 Sum_probs=167.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|||++++||.+++++|+++|++|++++|+++++....+++...+.++..+++|+++.++++++++.+.+.+ +++|
T Consensus 6 ~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 84 (253)
T PRK08217 6 KVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDF-GQLN 84 (253)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 589999999999999999999999999999999988888888777667788999999999999999999998887 6899
Q ss_pred EEEEcCCCCCCCCC---------CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhh
Q 028868 81 ILINNAAIAFVKPT---------VDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLY 150 (202)
Q Consensus 81 ~vi~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y 150 (202)
++||++|....... .+.+.++++.++++|+.+++.+++.++|.|.++ ..+.|+++||.. ..+.++...|
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~~~Y 163 (253)
T PRK08217 85 GLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQTNY 163 (253)
T ss_pred EEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCCchh
Confidence 99999997543221 567889999999999999999999999999755 457899998864 5677788999
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++|+++++++++++.++.++|+++++++||+++|++....
T Consensus 164 ~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~ 204 (253)
T PRK08217 164 SASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM 204 (253)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc
Confidence 99999999999999999988899999999999999987654
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-33 Score=216.22 Aligned_cols=189 Identities=29% Similarity=0.354 Sum_probs=169.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCC--CHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLS--SREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~--~~~~i~~~~~~~~~~~~~ 77 (202)
|+++||||+++||.+++++|+++|++|++++|+.+++....+++.+.+ ..+.++.+|++ +++++.++++.+.+.+ +
T Consensus 13 k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~ 91 (247)
T PRK08945 13 RIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQF-G 91 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHh-C
Confidence 689999999999999999999999999999999988888777776543 35666777775 7899999999999988 7
Q ss_pred CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 78 KLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 78 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
++|+|||+||.. ...++.+.+.+.|++.+++|+.+++.+++++.|+|.+++.++||++||..+..+.++...|+++|++
T Consensus 92 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 171 (247)
T PRK08945 92 RLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFA 171 (247)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHHH
Confidence 999999999975 3346677889999999999999999999999999988878999999999999998999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.+++.++.++...||+++.++||+++|++...
T Consensus 172 ~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~ 205 (247)
T PRK08945 172 TEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS 205 (247)
T ss_pred HHHHHHHHHHHhcccCEEEEEEecCCccCcchhh
Confidence 9999999999999899999999999999997543
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=211.87 Aligned_cols=185 Identities=24% Similarity=0.284 Sum_probs=167.7
Q ss_pred CEEEEecCC-CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGT-RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas-~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|.++|||++ ||||.++|++|.+.|+.|+.++|..+....+.... ......+|+++++++.++..++++.-.|++
T Consensus 8 k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~-----gl~~~kLDV~~~~~V~~v~~evr~~~~Gkl 82 (289)
T KOG1209|consen 8 KKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF-----GLKPYKLDVSKPEEVVTVSGEVRANPDGKL 82 (289)
T ss_pred CeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh-----CCeeEEeccCChHHHHHHHHHHhhCCCCce
Confidence 678999987 89999999999999999999999987776665432 378889999999999999999998433899
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+++||||..=..|..+.+.+++++.|++|++|.+++++++...+-+ ..|.||+++|..++.|+|..+.|.+||+|+..
T Consensus 83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lik-aKGtIVnvgSl~~~vpfpf~~iYsAsKAAiha 161 (289)
T KOG1209|consen 83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIK-AKGTIVNVGSLAGVVPFPFGSIYSASKAAIHA 161 (289)
T ss_pred EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHH-ccceEEEecceeEEeccchhhhhhHHHHHHHH
Confidence 99999999987778889999999999999999999999999965554 36999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++.|+.|+.+.||+|.++.||-|.|+.....
T Consensus 162 y~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~ 193 (289)
T KOG1209|consen 162 YARTLRLELKPFGVRVINAITGGVATDIADKR 193 (289)
T ss_pred hhhhcEEeeeccccEEEEecccceecccccCC
Confidence 99999999999999999999999999988653
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-33 Score=215.43 Aligned_cols=190 Identities=33% Similarity=0.409 Sum_probs=175.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+.+++....+++...+.++.++.+|++|.++++++++.+.+.+ +++|
T Consensus 7 ~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~~d 85 (251)
T PRK12826 7 RVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF-GRLD 85 (251)
T ss_pred CEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999888888777777666779999999999999999999999888 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~~ 159 (202)
++||++|.....+..+.+.++++..++.|+.+++.+++.++|.|.+++.+++|++||..+. .+.++...|+.+|++++.
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~ 165 (251)
T PRK12826 86 ILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVG 165 (251)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHHH
Confidence 9999999887777778899999999999999999999999999987778899999999887 788888999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++.++.++.+.|++++.++||++.|++..+.
T Consensus 166 ~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~ 197 (251)
T PRK12826 166 FTRALALELAARNITVNSVHPGGVDTPMAGNL 197 (251)
T ss_pred HHHHHHHHHHHcCeEEEEEeeCCCCcchhhhc
Confidence 99999999988899999999999999987544
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=222.31 Aligned_cols=188 Identities=30% Similarity=0.400 Sum_probs=169.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHH-HHHHHHHHHHHhCCCcc
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQ-REKLIETVTSIFQGKLN 80 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~-i~~~~~~~~~~~~~~id 80 (202)
++||||++|||++.|++|+++|.+|++++|++++++...+|+.+. +..+.++.+|.++.+. -+++.+.+. +.+|-
T Consensus 52 AVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~---~~~Vg 128 (312)
T KOG1014|consen 52 AVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLA---GLDVG 128 (312)
T ss_pred EEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhc---CCceE
Confidence 799999999999999999999999999999999999999999866 5679999999999887 333333332 24799
Q ss_pred EEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
++|||+|+.+ +..+.+.+.+.+++++++|..+...+++.++|.|.+++.|.||++||.++..+.|..+.|+++|++++
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~ 208 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVD 208 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHH
Confidence 9999999986 44567788889999999999999999999999999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
.|+++|..|+..+||.|.++.|..|-|+|.....+
T Consensus 209 ~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~~~ 243 (312)
T KOG1014|consen 209 FFSRCLQKEYESKGIFVQSVIPYLVATKMAKYRKP 243 (312)
T ss_pred HHHHHHHHHHHhcCeEEEEeehhheeccccccCCC
Confidence 99999999999999999999999999999875553
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=216.16 Aligned_cols=187 Identities=41% Similarity=0.514 Sum_probs=163.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHHHHhcC-CeEEEEEecCCC-HHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE--LDARLHEWKNKG-FKVTGSVCDLSS-REQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~-~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~ 76 (202)
|+++||||++|||+++|+.|+++|++|+++.++.+. .+...+.....+ ..+.+..+|+++ .++++.+++.+.+.+
T Consensus 6 ~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~- 84 (251)
T COG1028 6 KVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEF- 84 (251)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHc-
Confidence 689999999999999999999999998888887654 333333333122 368888899998 999999999999998
Q ss_pred CCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCC-ChhhhhhH
Q 028868 77 GKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-VSLYGAYK 154 (202)
Q Consensus 77 ~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-~~~y~asK 154 (202)
+++|++|||||.... .++.+.+.++|+..+++|+.|.+.+++.+.|+++++ +||++||..+. +.++ ...|++||
T Consensus 85 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~~~~~~~~Y~~sK 160 (251)
T COG1028 85 GRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-GGPPGQAAYAASK 160 (251)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-CCCCCcchHHHHH
Confidence 789999999999876 488889999999999999999999999888888843 99999999999 8777 49999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++.+|++.++.|+.+.||++++|+||+++|++.....
T Consensus 161 ~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~ 198 (251)
T COG1028 161 AALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALE 198 (251)
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhh
Confidence 99999999999999999999999999999999987544
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=214.50 Aligned_cols=177 Identities=28% Similarity=0.378 Sum_probs=152.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+||||++++++|+++|++|+++.+ +++..+++.+++ .+.++.+|++|.+++.+++++ + +++
T Consensus 7 k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~----~-~~i 76 (237)
T PRK12742 7 KKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET-----GATAVQTDSADRDAVIDVVRK----S-GAL 76 (237)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH----h-CCC
Confidence 68999999999999999999999999988766 445454443332 255778999999988777653 3 689
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~ 158 (202)
|++||++|.....+..+.+.++|+..+++|+.+++.+++.+++.|++ .+++|++||..+. .+.++...|+++|++++
T Consensus 77 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~ 154 (237)
T PRK12742 77 DILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPE--GGRIIIIGSVNGDRMPVAGMAAYAASKSALQ 154 (237)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc--CCeEEEEeccccccCCCCCCcchHHhHHHHH
Confidence 99999999876667777899999999999999999999999999964 5799999998874 57788899999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.+++.++.++.++||+|+.|+||+++|++..
T Consensus 155 ~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~ 185 (237)
T PRK12742 155 GMARGLARDFGPRGITINVVQPGPIDTDANP 185 (237)
T ss_pred HHHHHHHHHHhhhCeEEEEEecCcccCCccc
Confidence 9999999999999999999999999999864
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=212.17 Aligned_cols=162 Identities=25% Similarity=0.349 Sum_probs=148.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++ ++|++++|+.+ .+.+|+++.+++++++++ + +++|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~-~~id 57 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----V-GKVD 57 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----c-CCCC
Confidence 68999999999999999999999 99999999753 357999999999998875 3 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||+|.....++.+.+.++|++.+++|+.+++.+++.+.|+|.+ .++|+++||..+..+.++...|+++|+++++|
T Consensus 58 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 58 AVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND--GGSFTLTSGILSDEPIPGGASAATVNGALEGF 135 (199)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCeEEEEcccccCCCCCCchHHHHHHHHHHHH
Confidence 9999999877777888899999999999999999999999999975 47999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+++++.|+ ++||+|++|+||+++|++.
T Consensus 136 ~~~la~e~-~~gi~v~~i~Pg~v~t~~~ 162 (199)
T PRK07578 136 VKAAALEL-PRGIRINVVSPTVLTESLE 162 (199)
T ss_pred HHHHHHHc-cCCeEEEEEcCCcccCchh
Confidence 99999999 8899999999999999975
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=216.42 Aligned_cols=182 Identities=27% Similarity=0.295 Sum_probs=165.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|++++.+...+.....+.++.++.+|++|.+++.+++. +++|
T Consensus 3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------~~id 75 (257)
T PRK09291 3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE-------WDVD 75 (257)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc-------CCCC
Confidence 589999999999999999999999999999999887777766666556678899999999988776643 4799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....+..+.+.++++..+++|+.+++.+++.+++.+.+++.++||++||..+..+.++...|+++|++++.+
T Consensus 76 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~ 155 (257)
T PRK09291 76 VLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAI 155 (257)
T ss_pred EEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHH
Confidence 99999999877788889999999999999999999999999999877778999999999888888889999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.++.++.+.||+++.|+||++.|++..
T Consensus 156 ~~~l~~~~~~~gi~~~~v~pg~~~t~~~~ 184 (257)
T PRK09291 156 AEAMHAELKPFGIQVATVNPGPYLTGFND 184 (257)
T ss_pred HHHHHHHHHhcCcEEEEEecCcccccchh
Confidence 99999999889999999999999998764
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=208.65 Aligned_cols=187 Identities=33% Similarity=0.353 Sum_probs=168.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+.+++||+.-|||+++++.|++.|++|+.++|+++.+..+..+. ..-+..+..|+++++.+.+.+... +++|
T Consensus 8 ~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v-----~pid 79 (245)
T KOG1207|consen 8 VIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPV-----FPID 79 (245)
T ss_pred eEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhccc-----Cchh
Confidence 46899999999999999999999999999999998888887664 334889999999988877776653 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHH-hcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
.++||||+.-..|+.+++.++++..|++|+.+.+.+.|...+-+ .++..|.||++||.++.++..+...|+++|+|+++
T Consensus 80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDm 159 (245)
T KOG1207|consen 80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDM 159 (245)
T ss_pred hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHH
Confidence 99999999988999999999999999999999999999977644 45567899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchhhhc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVLS 195 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~ 195 (202)
++|+|+.|+++.+||||+|.|-.+-|+|.+.-+.++
T Consensus 160 lTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP 195 (245)
T KOG1207|consen 160 LTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDP 195 (245)
T ss_pred HHHHHHHhhCcceeEeeccCCeEEEecccccccCCc
Confidence 999999999999999999999999999988665544
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=212.81 Aligned_cols=188 Identities=33% Similarity=0.342 Sum_probs=167.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++|++|++ ..|++++..+...++...+.++..+.+|++|+++++++++++.+.+ +++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~-~~i 80 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHD-EPL 80 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhC-CCC
Confidence 68999999999999999999999999986 4677777777777776666778899999999999999999998887 789
Q ss_pred cEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC---CCCeEEEecCCCCccCCCC-ChhhhhhH
Q 028868 80 NILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIPS-VSLYGAYK 154 (202)
Q Consensus 80 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~-~~~y~asK 154 (202)
|++||++|.. ...+..+.+.++++..+++|+.+++.+++.+++.|.++ +.+++|++||..+..+.|+ ...|+++|
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK 160 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK 160 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence 9999999975 44566778999999999999999999999999998764 3578999999988887775 46899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++++.+++.++.++.+.|+++++++||+++||+..
T Consensus 161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~ 195 (247)
T PRK09730 161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHA 195 (247)
T ss_pred HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccc
Confidence 99999999999999888999999999999999754
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=211.68 Aligned_cols=188 Identities=29% Similarity=0.413 Sum_probs=171.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+++++....+++... ..+.++.+|+++.+++.++++++.+.+ +++|
T Consensus 7 ~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 84 (237)
T PRK07326 7 KVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF-GGLD 84 (237)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 57999999999999999999999999999999998888877777543 568899999999999999999999888 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.+++++.+++|+.+++.+++++++.|++ +.++||++||..+..+.++...|+++|+++.++
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~ 163 (237)
T PRK07326 85 VLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-GGGYIINISSLAGTNFFAGGAAYNASKFGLVGF 163 (237)
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-CCeEEEEECChhhccCCCCCchHHHHHHHHHHH
Confidence 9999999877777788899999999999999999999999999943 468999999998888888889999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++.++.++.+.|++++.|+||++.|++....
T Consensus 164 ~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~ 194 (237)
T PRK07326 164 SEAAMLDLRQYGIKVSTIMPGSVATHFNGHT 194 (237)
T ss_pred HHHHHHHhcccCcEEEEEeeccccCcccccc
Confidence 9999999988899999999999999877543
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=213.38 Aligned_cols=186 Identities=35% Similarity=0.486 Sum_probs=166.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+++||++++++|+++|++|++..| +.+........+...+.++..+.+|+++++++.++++++.+.+ +++
T Consensus 7 ~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 85 (252)
T PRK06077 7 KVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY-GVA 85 (252)
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc-CCC
Confidence 58999999999999999999999999887765 4455555555565556678899999999999999999999988 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++||+||.....+..+.+.+.+++.+++|+.+++.+++.+.|.|++ .+++|++||..+..+.++...|+++|++++.
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~ 163 (252)
T PRK06077 86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAGIRPAYGLSIYGAMKAAVIN 163 (252)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhccCCCCCchHHHHHHHHHHH
Confidence 99999999877777778889999999999999999999999999975 4799999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++.++.+ +++++.++||+++|++...
T Consensus 164 ~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~ 193 (252)
T PRK06077 164 LTKYLALELAP-KIRVNAIAPGFVKTKLGES 193 (252)
T ss_pred HHHHHHHHHhc-CCEEEEEeeCCccChHHHh
Confidence 99999999987 8999999999999998643
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=212.86 Aligned_cols=189 Identities=33% Similarity=0.409 Sum_probs=173.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+++..+.+.+++...+.++..+.+|++|.++++++++++.+.+ +++|
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 80 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGLD 80 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999888888777776666679999999999999999999999887 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....+..+.+.++++.+++.|+.|++.+++.+++.|++.+.+++|++||..+..+.+....|+.+|++++.+
T Consensus 81 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~ 160 (255)
T TIGR01963 81 ILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGL 160 (255)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHH
Confidence 99999998766666777889999999999999999999999999887778999999998888888899999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.++.+.+++++.++||++.|++...
T Consensus 161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~ 190 (255)
T TIGR01963 161 TKVLALEVAAHGITVNAICPGYVRTPLVEK 190 (255)
T ss_pred HHHHHHHhhhcCeEEEEEecCccccHHHHH
Confidence 999999998889999999999999987543
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=215.45 Aligned_cols=184 Identities=24% Similarity=0.288 Sum_probs=160.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH-HHHHhC--C
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET-VTSIFQ--G 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~-~~~~~~--~ 77 (202)
++++||||+||||++++++|+++|++|++++|+.+... ....+.++.++.+|+++.+++++++++ +.+.++ +
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL-----AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh-----hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 57999999999999999999999999999999865321 122355788999999999999998776 555442 4
Q ss_pred CccEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 78 KLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 78 ~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
++|++|||+|.... .+..+.+.+++++.+++|+.+++.+++.+.+.|.+++.++||++||..+..+.++...|+++|++
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 156 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAA 156 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHH
Confidence 79999999998643 56677899999999999999999999999999987777899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.++.+ .+.||+++.|+||+++|++...
T Consensus 157 ~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~ 189 (243)
T PRK07023 157 LDHHARAVALD-ANRALRIVSLAPGVVDTGMQAT 189 (243)
T ss_pred HHHHHHHHHhc-CCCCcEEEEecCCccccHHHHH
Confidence 99999999999 7789999999999999998653
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-32 Score=213.74 Aligned_cols=185 Identities=26% Similarity=0.315 Sum_probs=166.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|++++++...+.+. +..+.++.+|++|.+++.++++++.+.+ +++|
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 79 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAER-GPVD 79 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999888877766652 3468899999999999999999998888 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.++|+..+++|+.+++.+++++++.+.+++.+++|++||..+... ++...|+++|++++.+
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~ 158 (257)
T PRK07074 80 VLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHY 158 (257)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHHH
Confidence 999999987666777889999999999999999999999999998777789999999776543 4567899999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++.++.++|++++.++||+++|++..
T Consensus 159 ~~~~a~~~~~~gi~v~~v~pg~v~t~~~~ 187 (257)
T PRK07074 159 TKLLAVEYGRFGIRANAVAPGTVKTQAWE 187 (257)
T ss_pred HHHHHHHHhHhCeEEEEEEeCcCCcchhh
Confidence 99999999999999999999999999764
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-32 Score=209.16 Aligned_cols=190 Identities=35% Similarity=0.416 Sum_probs=170.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|||++|+||++++++|+++|++|+++.|+.+ ..+...+++...+.++..+.+|+++.+++.++++++.+.+ +++
T Consensus 6 ~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 84 (248)
T PRK05557 6 KVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF-GGV 84 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999987777654 4555566665556778999999999999999999999887 689
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++||++|.....+..+.+.+.+++.++.|+.+++.+++.+.+.+.+.+.+++|++||..+..+.++...|+++|++++.
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~ 164 (248)
T PRK05557 85 DILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIG 164 (248)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHHH
Confidence 99999999887777777899999999999999999999999999987777899999999888888899999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++.++.++.+.|++++.++||+++|++..+.
T Consensus 165 ~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~ 196 (248)
T PRK05557 165 FTKSLARELASRGITVNAVAPGFIETDMTDAL 196 (248)
T ss_pred HHHHHHHHhhhhCeEEEEEecCccCCcccccc
Confidence 99999999988899999999999999887654
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=211.72 Aligned_cols=198 Identities=23% Similarity=0.199 Sum_probs=184.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
+.++|||+++|||+++|..+..+|++|.++.|+.+++.++..+++-. -.+|.+..+|+.|.+++...++++++.+ ++
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~-~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE-GP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc-CC
Confidence 36899999999999999999999999999999999999999988633 2348899999999999999999999987 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|.+++|||..-.+-+++.+.++++..+++|++|+++++++.+|-|++.. .|+|+.+||.++..+.+++++|+++|+|+
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al 192 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL 192 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence 99999999999888999999999999999999999999999999998765 68999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhhhccccC
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVLSVGIK 199 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~~~~~ 199 (202)
.+++..+++|+.+.||+|..+.|+.++||.+.+.-...|+++
T Consensus 193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t 234 (331)
T KOG1210|consen 193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEET 234 (331)
T ss_pred HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchhe
Confidence 999999999999999999999999999999988877777654
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=210.07 Aligned_cols=176 Identities=30% Similarity=0.354 Sum_probs=158.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|+.+.. . ...++.+|+++.++++++++++.+.+ ++|
T Consensus 4 k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~--~~~~~~~D~~~~~~~~~~~~~~~~~~--~~d 70 (234)
T PRK07577 4 RTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------F--PGELFACDLADIEQTAATLAQINEIH--PVD 70 (234)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------c--CceEEEeeCCCHHHHHHHHHHHHHhC--CCc
Confidence 6899999999999999999999999999999987541 1 12467899999999999999988875 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....++.+.+.+++++.+++|+.+++.+.+.++|.|++++.++||++||.. ..+.++...|+++|++++++
T Consensus 71 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~ 149 (234)
T PRK07577 71 AIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGC 149 (234)
T ss_pred EEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHHH
Confidence 99999998877778888999999999999999999999999999887788999999985 45667889999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+.||++++|+||+++|++...
T Consensus 150 ~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~ 179 (234)
T PRK07577 150 TRTWALELAEYGITVNAVAPGPIETELFRQ 179 (234)
T ss_pred HHHHHHHHHhhCcEEEEEecCcccCccccc
Confidence 999999999899999999999999998754
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=213.57 Aligned_cols=187 Identities=23% Similarity=0.236 Sum_probs=160.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
|+++||||+||||++++++|+++|++|++++|++ +.+....+ ..+.++.++.+|++++++++++++++.+.++. .
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 78 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---QYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN 78 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---ccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence 6899999999999999999999999999999986 33333222 22457888999999999999999998876621 1
Q ss_pred c--cEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 L--NILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 i--d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+ .++|+|+|... ..++.+.+.++|+..+++|+.+++.+++.++|.|.+. ..++||++||..+..+.++...|+++|
T Consensus 79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK 158 (251)
T PRK06924 79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK 158 (251)
T ss_pred CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence 2 28999999753 3567788999999999999999999999999999874 357999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc--cCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++.+++.++.|++ +.||+|++|+||+++|++...
T Consensus 159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~ 196 (251)
T PRK06924 159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQ 196 (251)
T ss_pred HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHH
Confidence 999999999999975 468999999999999998653
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=211.44 Aligned_cols=174 Identities=29% Similarity=0.319 Sum_probs=152.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|++... ...++.++.+|++++ ++ ++.+.+ +++|
T Consensus 6 k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~--~~----~~~~~~-~~id 69 (235)
T PRK06550 6 KTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD--LE----PLFDWV-PSVD 69 (235)
T ss_pred CEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH--HH----HHHHhh-CCCC
Confidence 6899999999999999999999999999999985431 123578899999987 33 333445 6899
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||+|... ..++.+.+.+++++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++++.
T Consensus 70 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 149 (235)
T PRK06550 70 ILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAG 149 (235)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHH
Confidence 9999999753 356778899999999999999999999999999987777899999999999998999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+.+.||+++.|+||+++|++...
T Consensus 150 ~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~ 180 (235)
T PRK06550 150 FTKQLALDYAKDGIQVFGIAPGAVKTPMTAA 180 (235)
T ss_pred HHHHHHHHhhhcCeEEEEEeeCCccCccccc
Confidence 9999999999899999999999999998653
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-32 Score=235.88 Aligned_cols=184 Identities=29% Similarity=0.336 Sum_probs=168.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||++++++|+++|++|++++|+.+.++...+++... ...+..+.+|++|.+++.++++++.+.+ ++
T Consensus 415 kvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~-g~ 493 (676)
T TIGR02632 415 RVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY-GG 493 (676)
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence 68999999999999999999999999999999988887777766532 2357889999999999999999999998 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|++|||||.....++.+.+.++|+..+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|+++|+++
T Consensus 494 iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKaA~ 573 (676)
T TIGR02632 494 VDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAE 573 (676)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHHHH
Confidence 99999999987767788889999999999999999999999999998764 57999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
++++++++.|+.+.||+||+|+||+|.|
T Consensus 574 ~~l~r~lA~el~~~gIrVn~V~Pg~V~~ 601 (676)
T TIGR02632 574 AHLARCLAAEGGTYGIRVNTVNPDAVLQ 601 (676)
T ss_pred HHHHHHHHHHhcccCeEEEEEECCceec
Confidence 9999999999999999999999999965
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-31 Score=207.32 Aligned_cols=189 Identities=37% Similarity=0.430 Sum_probs=174.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|++++.+...+++...+.++.++.+|++|.+++.++++.+.+.+ +++|
T Consensus 6 ~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 84 (246)
T PRK05653 6 KTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAF-GALD 84 (246)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 589999999999999999999999999999999988888777777667789999999999999999999998887 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....+..+.+.++++..++.|+.+++.+++.+.|+|.+.+.++||++||..+..+.++...|+.+|++++.+
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~ 164 (246)
T PRK05653 85 ILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGF 164 (246)
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHHH
Confidence 99999998777777788999999999999999999999999999877778999999998888888889999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.++.+.|++++.++||++.+++...
T Consensus 165 ~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~ 194 (246)
T PRK05653 165 TKALALELASRGITVNAVAPGFIDTDMTEG 194 (246)
T ss_pred HHHHHHHHhhcCeEEEEEEeCCcCCcchhh
Confidence 999999998889999999999999998763
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-32 Score=209.56 Aligned_cols=179 Identities=26% Similarity=0.326 Sum_probs=149.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||+++|++|+++| +.|++..|+.... . ...++.++++|+++.++++++.+ .+ ++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~--~~~~~~~~~~Dls~~~~~~~~~~----~~-~~ 67 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------F--QHDNVQWHALDVTDEAEIKQLSE----QF-TQ 67 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------c--ccCceEEEEecCCCHHHHHHHHH----hc-CC
Confidence 689999999999999999999985 5677777754321 1 13468889999999999888543 34 68
Q ss_pred ccEEEEcCCCCC------CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc---CCCCChh
Q 028868 79 LNILINNAAIAF------VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR---GIPSVSL 149 (202)
Q Consensus 79 id~vi~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~---~~~~~~~ 149 (202)
+|++|||+|... ..++.+.+.+.|+..+++|+.+++.+++.++|.|++++.++++++||..+.. +.++...
T Consensus 68 id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~ 147 (235)
T PRK09009 68 LDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYS 147 (235)
T ss_pred CCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcch
Confidence 999999999863 2346678889999999999999999999999999877678999999865533 3456779
Q ss_pred hhhhHHHHHHHHHHHHHHHcc--CCcEEEEeeCCcccCCCccchh
Q 028868 150 YGAYKGAMNQLTKNLACEWAK--DNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+++|+++++|+++|+.|+.+ .+|+|++|+||+++|++..++.
T Consensus 148 Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~~ 192 (235)
T PRK09009 148 YRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPFQ 192 (235)
T ss_pred hhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcchh
Confidence 999999999999999999976 5899999999999999987543
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-31 Score=206.08 Aligned_cols=190 Identities=35% Similarity=0.453 Sum_probs=169.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++|++|++..|+.+ ......+.+...+.++.++.+|+++.++++++++++.+.+ +++
T Consensus 7 ~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-~~i 85 (249)
T PRK12825 7 RVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF-GRI 85 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999887666543 4444555555556678999999999999999999998887 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|.+||++|.....++.+.+.++++..+++|+.+++.+++.+.+++++.+.+++|++||..+..+.++...|+.+|+++++
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~ 165 (249)
T PRK12825 86 DILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVG 165 (249)
T ss_pred CEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHHH
Confidence 99999999877777778899999999999999999999999999988778899999999998888889999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++.++.++.++|++++.++||++.|++..+.
T Consensus 166 ~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~ 197 (249)
T PRK12825 166 LTKALARELAEYGITVNMVAPGDIDTDMKEAT 197 (249)
T ss_pred HHHHHHHHHhhcCeEEEEEEECCccCCccccc
Confidence 99999999988899999999999999987654
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-31 Score=209.06 Aligned_cols=189 Identities=36% Similarity=0.517 Sum_probs=168.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+++..+...++.... ++.++.+|++|+++++++++++.+.+ +++|
T Consensus 12 ~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 88 (264)
T PRK12829 12 LRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAVERF-GGLD 88 (264)
T ss_pred CEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 68999999999999999999999999999999987776665554332 57889999999999999999999888 6899
Q ss_pred EEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC-CeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|||++|.. ...+....+.++++.+++.|+.+++.+++.+++.+...+. ++|+++||..+..+.++...|+.+|++++
T Consensus 89 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~ 168 (264)
T PRK12829 89 VLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVV 168 (264)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHH
Confidence 999999987 5556677889999999999999999999999999876554 78999999888888888899999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
.+++.++.++...+++++++.||++.|++.....
T Consensus 169 ~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~ 202 (264)
T PRK12829 169 GLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVI 202 (264)
T ss_pred HHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHh
Confidence 9999999999888999999999999999875543
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-32 Score=226.92 Aligned_cols=185 Identities=29% Similarity=0.342 Sum_probs=163.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh--hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||++|||++++++|+++|++|+++++.. +.+....+++ + ...+.+|+++.++++++++.+.+++ ++
T Consensus 211 ~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~--~~~~~~Dv~~~~~~~~~~~~~~~~~-g~ 284 (450)
T PRK08261 211 KVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---G--GTALALDITAPDAPARIAEHLAERH-GG 284 (450)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhC-CC
Confidence 6899999999999999999999999999998843 3333333322 2 3577899999999999999999887 68
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++|||||.....++.+.+.++|+.++++|+.+++.+.+.+.+.+..++.++||++||.++..+.++...|+++|++++
T Consensus 285 id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~ 364 (450)
T PRK08261 285 LDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVI 364 (450)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHH
Confidence 99999999988777888899999999999999999999999999655455789999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+++++.++.+.||++++|+||+++|++....
T Consensus 365 ~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~ 397 (450)
T PRK08261 365 GLVQALAPLLAERGITINAVAPGFIETQMTAAI 397 (450)
T ss_pred HHHHHHHHHHhhhCcEEEEEEeCcCcchhhhcc
Confidence 999999999999999999999999999987654
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-31 Score=206.05 Aligned_cols=187 Identities=28% Similarity=0.354 Sum_probs=169.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|++++..+..+++... .+..+.+|++|.++++++++++.+.+ +++|
T Consensus 8 k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 84 (239)
T PRK12828 8 KVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNRQF-GRLD 84 (239)
T ss_pred CEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHHHh-CCcC
Confidence 68999999999999999999999999999999988777766666543 35667799999999999999999988 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....+..+.+.+++++.++.|+.+++.++++++|.+.+++.+++|++||..+..+.++...|+++|++++.+
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~ 164 (239)
T PRK12828 85 ALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARL 164 (239)
T ss_pred EEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHH
Confidence 99999998766666777899999999999999999999999999877789999999999998888899999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.++.+.|++++.+.||++.|++...
T Consensus 165 ~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~ 194 (239)
T PRK12828 165 TEALAAELLDRGITVNAVLPSIIDTPPNRA 194 (239)
T ss_pred HHHHHHHhhhcCeEEEEEecCcccCcchhh
Confidence 999999998889999999999999986543
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-32 Score=207.22 Aligned_cols=182 Identities=24% Similarity=0.296 Sum_probs=155.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+++...... ++ .++.+..+|++|++++.++++.+.+ +++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~d~~~~~~~~~~~~~---~~id 73 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-AL----PGVHIEKLDMNDPASLDQLLQRLQG---QRFD 73 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hc----cccceEEcCCCCHHHHHHHHHHhhc---CCCC
Confidence 68999999999999999999999999999999987654332 21 2467788999999999999988743 4799
Q ss_pred EEEEcCCCCCC--CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC---CCChhhhhhHH
Q 028868 81 ILINNAAIAFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---PSVSLYGAYKG 155 (202)
Q Consensus 81 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---~~~~~y~asK~ 155 (202)
++||++|.... .++.+.+.++++..+++|+.+++.+++.++|++++. .+.++++||..+..+. .+...|+++|+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~ 152 (225)
T PRK08177 74 LLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG-QGVLAFMSSQLGSVELPDGGEMPLYKASKA 152 (225)
T ss_pred EEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc-CCEEEEEccCccccccCCCCCccchHHHHH
Confidence 99999998632 356778899999999999999999999999999753 4789999997765442 35678999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++.+++.++.|++++||++++|+||+++|++..+.
T Consensus 153 a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~ 188 (225)
T PRK08177 153 ALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN 188 (225)
T ss_pred HHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC
Confidence 999999999999999999999999999999997643
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-31 Score=207.38 Aligned_cols=184 Identities=29% Similarity=0.371 Sum_probs=165.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+.++++... +. .+..+.+|++|.+++.++++.+.+..++++|
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 58999999999999999999999999999999987765442 22 3677899999999999999988775446899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
.++|++|.....+..+.+.+++++.++.|+.|++.+++.++|.|.+.+.+++|++||..+..+.++...|+++|++++.+
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~ 156 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAW 156 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHH
Confidence 99999998766677788999999999999999999999999999887778999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++.++.+.|++++.+.||+++|++...
T Consensus 157 ~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~ 186 (256)
T PRK08017 157 SDALRMELRHSGIKVSLIEPGPIRTRFTDN 186 (256)
T ss_pred HHHHHHHHhhcCCEEEEEeCCCcccchhhc
Confidence 999999998899999999999999988764
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=205.71 Aligned_cols=178 Identities=29% Similarity=0.342 Sum_probs=160.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+|+||+++|++|+++|+ +|++++|+++++.. .+.++.++.+|++|.++++++++. + +++
T Consensus 7 ~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~----~-~~i 74 (238)
T PRK08264 7 KVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA----A-SDV 74 (238)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh----c-CCC
Confidence 5899999999999999999999999 99999999766543 345788999999999999887765 3 579
Q ss_pred cEEEEcCCC-CCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++||++|. ....++.+.+.+++++.+++|+.+++.+++++.|.+++++.++++++||..+..+.++...|+.+|++++
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~ 154 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAW 154 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHH
Confidence 999999998 5566777889999999999999999999999999998777889999999999998899999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.+++.++.++.++|+++++++||.++|++...
T Consensus 155 ~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~ 186 (238)
T PRK08264 155 SLTQALRAELAPQGTRVLGVHPGPIDTDMAAG 186 (238)
T ss_pred HHHHHHHHHhhhcCeEEEEEeCCccccccccc
Confidence 99999999999899999999999999998654
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-31 Score=233.15 Aligned_cols=188 Identities=32% Similarity=0.434 Sum_probs=173.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||++++++|+++|++|++++|+.+.++....++... .++.++.+|++++++++++++++.+.+ +++|
T Consensus 423 k~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~-g~iD 500 (681)
T PRK08324 423 KVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF-GGVD 500 (681)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999998887777776544 568899999999999999999999888 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++|+..+++|+.|++.+++.+.|.|++++ .++||++||..+..+.++...|+++|+++++
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~ 580 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELH 580 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHHH
Confidence 999999998888888899999999999999999999999999998866 4899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcc--cCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVI--KTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v--~t~~~~~ 190 (202)
+++.++.++.+.||+++.|+||++ .|++..+
T Consensus 581 l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~ 613 (681)
T PRK08324 581 LVRQLALELGPDGIRVNGVNPDAVVRGSGIWTG 613 (681)
T ss_pred HHHHHHHHhcccCeEEEEEeCceeecCCccccc
Confidence 999999999999999999999999 8887653
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-31 Score=204.06 Aligned_cols=187 Identities=37% Similarity=0.492 Sum_probs=168.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+||||++++||.+++++|+++|++|++++|+. +......+.+...+.++.++.+|++|+++++++++.+.+.+ +++|+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL-GPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence 58999999999999999999999999998875 45555556666666678999999999999999999998887 78999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHHH
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~ 161 (202)
+||++|.....+..+.+.+.++..+++|+.+++.+++.+.+++.+.+.++++++||.++..+.++...|+.+|++++.++
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~ 159 (239)
T TIGR01830 80 LVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT 159 (239)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence 99999987666667788999999999999999999999999997766789999999999999899999999999999999
Q ss_pred HHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 162 KNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 162 ~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+.++.++...|++++.++||+++|++...
T Consensus 160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~ 188 (239)
T TIGR01830 160 KSLAKELASRNITVNAVAPGFIDTDMTDK 188 (239)
T ss_pred HHHHHHHhhcCeEEEEEEECCCCChhhhh
Confidence 99999998889999999999999987654
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=206.19 Aligned_cols=175 Identities=26% Similarity=0.366 Sum_probs=155.6
Q ss_pred EEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEE
Q 028868 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI 83 (202)
Q Consensus 4 lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi 83 (202)
|||||++|||++++++|+++|++|++++|++++++...++++ .+.++.++.+|+++++++.++++++ +++|++|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~id~li 74 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEA-----GPFDHVV 74 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhc-----CCCCEEE
Confidence 699999999999999999999999999999888777666664 3567889999999999998888763 6899999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHHHHH
Q 028868 84 NNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN 163 (202)
Q Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~~~ 163 (202)
|++|.....++.+.+.+++++++++|+.+++.+++ .+.+. +.++||++||.++..+.++...|+++|+++++++++
T Consensus 75 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~--~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (230)
T PRK07041 75 ITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIA--PGGSLTFVSGFAAVRPSASGVLQGAINAALEALARG 150 (230)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhc--CCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHH
Confidence 99998777777788999999999999999999999 44453 468999999999999999999999999999999999
Q ss_pred HHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 164 LACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 164 la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.|+.+ ++++.++||+++|++...
T Consensus 151 la~e~~~--irv~~i~pg~~~t~~~~~ 175 (230)
T PRK07041 151 LALELAP--VRVNTVSPGLVDTPLWSK 175 (230)
T ss_pred HHHHhhC--ceEEEEeecccccHHHHh
Confidence 9999974 999999999999998653
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-31 Score=203.58 Aligned_cols=186 Identities=31% Similarity=0.384 Sum_probs=162.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++|++|++++|+. +......+.+... +..+.++.+|+++++++.++++++.+.+ ++
T Consensus 7 ~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 85 (249)
T PRK09135 7 KVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF-GR 85 (249)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence 5799999999999999999999999999999864 4444444445433 3458889999999999999999999988 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++||+||.....++.+.+.++++.++++|+.|++.+++++.|++.+. .+.+++++|..+..+.++...|+.+|++++
T Consensus 86 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~ 164 (249)
T PRK09135 86 LDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIHAERPLKGYPVYCAAKAALE 164 (249)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChhhcCCCCCchhHHHHHHHHH
Confidence 9999999998766677777889999999999999999999999998764 578888888877888888999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.+++.++.++.+ +++++.+.||+++||+..
T Consensus 165 ~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~ 194 (249)
T PRK09135 165 MLTRSLALELAP-EVRVNAVAPGAILWPEDG 194 (249)
T ss_pred HHHHHHHHHHCC-CCeEEEEEeccccCcccc
Confidence 999999999965 799999999999999864
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=205.13 Aligned_cols=179 Identities=31% Similarity=0.384 Sum_probs=159.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||+++++.|+++|++|++++|++++.+...+.. .+.++.+|+++.++++++++. . +++|
T Consensus 10 ~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~----~-~~~d 79 (245)
T PRK07060 10 KSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA----A-GAFD 79 (245)
T ss_pred CEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH----h-CCCC
Confidence 57999999999999999999999999999999987766554432 255788999999998888775 3 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++||++|.....+..+.+.+++++.+++|+.+++.+++++++.+.+++ .++||++||..+..+.++...|+.+|++++.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~ 159 (245)
T PRK07060 80 GLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDA 159 (245)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHH
Confidence 999999988777777789999999999999999999999999987553 4899999999999998999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++.++.++.+.|++++.++||+++|++..
T Consensus 160 ~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~ 189 (245)
T PRK07060 160 ITRVLCVELGPHGIRVNSVNPTVTLTPMAA 189 (245)
T ss_pred HHHHHHHHHhhhCeEEEEEeeCCCCCchhh
Confidence 999999999888999999999999999864
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.6e-33 Score=198.10 Aligned_cols=188 Identities=31% Similarity=0.416 Sum_probs=170.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+.+|||+.+|+|++.|++|++.|+.|++.+-..++.+...+++ +.++.+.+.|++.++++..++.+.+.+| +++|.
T Consensus 11 valvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kf-grld~ 86 (260)
T KOG1199|consen 11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKF-GRLDA 86 (260)
T ss_pred eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhc-cceee
Confidence 5799999999999999999999999999999888888887765 6689999999999999999999999999 89999
Q ss_pred EEEcCCCCCC------CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC------CCeEEEecCCCCccCCCCChh
Q 028868 82 LINNAAIAFV------KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVRGIPSVSL 149 (202)
Q Consensus 82 vi~~ag~~~~------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~vsS~~~~~~~~~~~~ 149 (202)
++||||+..- ..-...+.|+++..+++|+.|++++++...-+|.+++ .|.||+..|.+++.+..++++
T Consensus 87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaa 166 (260)
T KOG1199|consen 87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAA 166 (260)
T ss_pred eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhh
Confidence 9999998521 1223457899999999999999999999999996542 489999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
|++||.++.+++.-++++++..|||+++|.||.++||+....++
T Consensus 167 ysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpe 210 (260)
T KOG1199|consen 167 YSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPE 210 (260)
T ss_pred hhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhH
Confidence 99999999999999999999999999999999999999976654
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-31 Score=203.72 Aligned_cols=181 Identities=27% Similarity=0.309 Sum_probs=152.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+||||++++++|+++|++|++++|+.+ ..+....++...+.++.++.+|++|.+++.++++++.+.+ +.+
T Consensus 7 k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 85 (248)
T PRK07806 7 KTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF-GGL 85 (248)
T ss_pred cEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 67999999999999999999999999999998753 4555556666556678899999999999999999998887 689
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-----cCCCCChhhhhhH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----RGIPSVSLYGAYK 154 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-----~~~~~~~~y~asK 154 (202)
|++||+||...... . +++..+++|+.+++.+++++.|+|.+ .+++|++||..+. .+.+.+..|+++|
T Consensus 86 d~vi~~ag~~~~~~---~---~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK 157 (248)
T PRK07806 86 DALVLNASGGMESG---M---DEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPEYEPVARSK 157 (248)
T ss_pred cEEEECCCCCCCCC---C---CcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCccccHHHHHH
Confidence 99999998643211 1 24567889999999999999999854 4799999996543 2345577899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++.+++.++.++.+.||++++|+||++.|++...
T Consensus 158 ~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~ 193 (248)
T PRK07806 158 RAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTAT 193 (248)
T ss_pred HHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhh
Confidence 999999999999999999999999999999987643
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=196.19 Aligned_cols=182 Identities=21% Similarity=0.244 Sum_probs=158.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||.++++.|+++|++|++++|++++.....+.+... .++.++.+|++++++++++++++...+ +++|
T Consensus 6 ~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~id 83 (238)
T PRK05786 6 KKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVL-NAID 83 (238)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 58999999999999999999999999999999988777665555433 358889999999999999999988877 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~~ 159 (202)
.+|+++|.....+.. +.++++.+++.|+.+++.+++.++|+|++ .+++|++||..+. .+.++...|+++|++++.
T Consensus 84 ~ii~~ag~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~ 159 (238)
T PRK05786 84 GLVVTVGGYVEDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIYKASPDQLSYAVAKAGLAK 159 (238)
T ss_pred EEEEcCCCcCCCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcccCCCCchHHHHHHHHHHH
Confidence 999999975443333 34889999999999999999999999965 4789999998764 356777889999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+++.++.++.+.|++++.|+||+++|++.
T Consensus 160 ~~~~~~~~~~~~gi~v~~i~pg~v~~~~~ 188 (238)
T PRK05786 160 AVEILASELLGRGIRVNGIAPTTISGDFE 188 (238)
T ss_pred HHHHHHHHHhhcCeEEEEEecCccCCCCC
Confidence 99999999988899999999999999875
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-29 Score=193.77 Aligned_cols=179 Identities=23% Similarity=0.231 Sum_probs=150.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+++||++++++|+++|++|++++|+++..+... .. .+.++.+|+++.++++++++++. +.++|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~v~~~~~~~~---~~~~d 72 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----AL--GAEALALDVADPASVAGLAWKLD---GEALD 72 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hc--cceEEEecCCCHHHHHHHHHHhc---CCCCC
Confidence 68999999999999999999999999999999977654432 22 35578999999999999877653 24799
Q ss_pred EEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC---hhhhhhHH
Q 028868 81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV---SLYGAYKG 155 (202)
Q Consensus 81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~---~~y~asK~ 155 (202)
++||++|... ..+..+.+.++++..+++|+.+++.+++.+.|+|.+. .++++++||..+..+..+. ..|+++|+
T Consensus 73 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~ 151 (222)
T PRK06953 73 AAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKA 151 (222)
T ss_pred EEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHH
Confidence 9999999762 3455667899999999999999999999999999764 5789999998776553332 35999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++.+++.++.++ .+++++.|+||+++|++..+.
T Consensus 152 a~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~~ 185 (222)
T PRK06953 152 ALNDALRAASLQA--RHATCIALHPGWVRTDMGGAQ 185 (222)
T ss_pred HHHHHHHHHhhhc--cCcEEEEECCCeeecCCCCCC
Confidence 9999999999986 379999999999999997653
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-28 Score=186.31 Aligned_cols=178 Identities=31% Similarity=0.402 Sum_probs=156.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++ ++|++++|+.++.+...+.. ..+.++.+|++|.+++++++++. +++|
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~-----~~id 73 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL-----GRLD 73 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc-----CCCC
Confidence 58999999999999999999999 99999999987665554332 24778899999999988887753 4799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++||++|.....+..+.+.+++...++.|+.+++.+++.+++.++++ .+++|++||..+..+.++...|+.+|++++.+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~ 152 (227)
T PRK08219 74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRANPGWGSYAASKFALRAL 152 (227)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcCCCCchHHHHHHHHHHH
Confidence 99999998766667778899999999999999999999999999875 57999999999988888899999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.++... +++++++||+++|++...
T Consensus 153 ~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~ 181 (227)
T PRK08219 153 ADALREEEPGN-VRVTSVHPGRTDTDMQRG 181 (227)
T ss_pred HHHHHHHhcCC-ceEEEEecCCccchHhhh
Confidence 99999988765 999999999999987654
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-28 Score=188.56 Aligned_cols=171 Identities=17% Similarity=0.130 Sum_probs=131.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||++++++|+++|++|++++|+...... .. ..+. ...+.+|+++.+++.+ .+ +++|
T Consensus 15 k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~---~~-~~~~-~~~~~~D~~~~~~~~~-------~~-~~iD 81 (245)
T PRK12367 15 KRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE---SN-DESP-NEWIKWECGKEESLDK-------QL-ASLD 81 (245)
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh---hh-ccCC-CeEEEeeCCCHHHHHH-------hc-CCCC
Confidence 689999999999999999999999999999998632211 11 1122 3567899999887653 34 5799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC---CCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
++|||||... ..+.+.++|++.+++|+.|++.+++.++|.|.++ +++.+++.+|.++..+ ++...|++||+++
T Consensus 82 ilVnnAG~~~---~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKaal 157 (245)
T PRK12367 82 VLILNHGINP---GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKRLI 157 (245)
T ss_pred EEEECCccCC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHHHH
Confidence 9999999753 2346889999999999999999999999999763 2334545556555444 4667899999998
Q ss_pred HHHH---HHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 158 NQLT---KNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 158 ~~~~---~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
..+. +.++.|+.+.+++|+.++||+++|++.
T Consensus 158 ~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~ 191 (245)
T PRK12367 158 GQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN 191 (245)
T ss_pred HHHHHHHHHHHHhhcccccEEEEecCCCcccccC
Confidence 6543 444445567899999999999999974
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=176.44 Aligned_cols=181 Identities=25% Similarity=0.352 Sum_probs=165.4
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++||+|-. ..|++.||+.|.++|+++.++..++ ++++.++++.+.-....+++||++++++++++++++++++ ++
T Consensus 7 K~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~-g~ 84 (259)
T COG0623 7 KRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW-GK 84 (259)
T ss_pred ceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh-Cc
Confidence 789999976 7999999999999999999999886 6777777665554446789999999999999999999998 79
Q ss_pred ccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|+++|+.++.+ .+++.+.+.|.+...+++..+++..+++++.|+|.. +|+++.++-..+.+..|++...+.+|
T Consensus 85 lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~--ggSiltLtYlgs~r~vPnYNvMGvAK 162 (259)
T COG0623 85 LDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN--GGSILTLTYLGSERVVPNYNVMGVAK 162 (259)
T ss_pred ccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC--CCcEEEEEeccceeecCCCchhHHHH
Confidence 999999999875 356778999999999999999999999999999965 78999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
++++.-.|-||.++++.|||||.|+-|+++|
T Consensus 163 AaLEasvRyLA~dlG~~gIRVNaISAGPIrT 193 (259)
T COG0623 163 AALEASVRYLAADLGKEGIRVNAISAGPIRT 193 (259)
T ss_pred HHHHHHHHHHHHHhCccCeEEeeecccchHH
Confidence 9999999999999999999999999999987
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=184.67 Aligned_cols=189 Identities=28% Similarity=0.234 Sum_probs=154.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEE--EEeCChhHHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVH--TCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi--~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|+||+|.|||..++..+..++...+ +..|.... .+.+. ..+........|++...-+.++.+..++.. +
T Consensus 7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~-g 81 (253)
T KOG1204|consen 7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE----LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKG-G 81 (253)
T ss_pred eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc----ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcC-C
Confidence 5789999999999999998888876433 33333222 11111 123344556678888888888888888886 7
Q ss_pred CccEEEEcCCCCCC-CC--CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhh
Q 028868 78 KLNILINNAAIAFV-KP--TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 78 ~id~vi~~ag~~~~-~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+.|++|||||...+ .. .+.-+.++|++.++.|+++.+.+.+.++|.+++.+ .+.+|++||.++.+|++..+.|+++
T Consensus 82 kr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~ 161 (253)
T KOG1204|consen 82 KRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSS 161 (253)
T ss_pred ceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhh
Confidence 99999999997532 22 23678999999999999999999999999999874 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhhhc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVLS 195 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~~ 195 (202)
|+|+++|.+.+|.|-+ .++++.+++||.+||+|.....+..
T Consensus 162 KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~ 202 (253)
T KOG1204|consen 162 KAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETS 202 (253)
T ss_pred HHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhcc
Confidence 9999999999999987 7999999999999999998776655
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.95 E-value=9e-27 Score=222.77 Aligned_cols=182 Identities=19% Similarity=0.216 Sum_probs=159.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCCh---------------------------------------------
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQ--------------------------------------------- 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~--------------------------------------------- 34 (202)
|++|||||++|||.++|++|+++ |++|++++|+.
T Consensus 1998 ~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~~ 2077 (2582)
T TIGR02813 1998 DVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPVL 2077 (2582)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccccc
Confidence 58999999999999999999998 69999999982
Q ss_pred --hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHh
Q 028868 35 --IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112 (202)
Q Consensus 35 --~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~ 112 (202)
......++++.+.+..+.++.+|++|.++++++++++.+. ++||+||||||+...+.+.+.+.++|+.++++|+.|
T Consensus 2078 ~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~--g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2078 SSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT--LQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred hhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh--CCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 1112233444555778999999999999999999999876 479999999999888888999999999999999999
Q ss_pred HHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.+++++.+.+ .++||++||.++..+.++++.|+++|++++.+++.++.+++ +++|++|+||+++|+|..+
T Consensus 2156 ~~~Ll~al~~~~----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~~~ 2227 (2582)
T TIGR02813 2156 LLSLLAALNAEN----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMVNP 2227 (2582)
T ss_pred HHHHHHHHHHhC----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCccch
Confidence 999998886543 35799999999999999999999999999999999999975 5999999999999998753
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-27 Score=175.74 Aligned_cols=192 Identities=22% Similarity=0.219 Sum_probs=168.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-----EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-----IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-----~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
|++||||++||||.++|++|++... ++++++|+.++.+..+..+.+. ..++.++++|++|..|+.++..++
T Consensus 4 KvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di 83 (341)
T KOG1478|consen 4 KVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDI 83 (341)
T ss_pred eEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHH
Confidence 6899999999999999999998764 5788999999999999998755 347899999999999999999999
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCC---------------------------CCCHHHHHHHHHHHhHhHHHHHHHHhHHH
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTV---------------------------DITAEDMSTVSSTNFESVFHLSQLAHPLF 124 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~---------------------------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 124 (202)
+++| .++|.++.|||+.....+. ..+.|++..+++.|++|++.+++.+.|++
T Consensus 84 ~~rf-~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll 162 (341)
T KOG1478|consen 84 KQRF-QRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL 162 (341)
T ss_pred HHHh-hhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence 9999 8999999999986443221 24788999999999999999999999999
Q ss_pred hcCCCCeEEEecCCCCccC---------CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 125 KASGNGSIVFISSVGGVRG---------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 125 ~~~~~~~iv~vsS~~~~~~---------~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
.+.+...+|++||..+... ..+..+|..||.+.+.+.-++.+.+.+.|+....++||..-|.++..+..
T Consensus 163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~ 240 (341)
T KOG1478|consen 163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN 240 (341)
T ss_pred hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence 9887779999999876543 34677899999999999999999999999999999999999988865543
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-26 Score=168.57 Aligned_cols=175 Identities=23% Similarity=0.297 Sum_probs=150.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHH---HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDAR---LHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~---~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++||||+++||++++++|+++|+ .|++++|+++..+.. .+++.+.+.++.++.+|++++++++++++++...+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~- 79 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARL- 79 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence 6899999999999999999999997 688888876543322 34555556788899999999999999999998887
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
+++|.+||++|.....+..+.+.++++.++++|+.+++.+++.+ .+.+.++++++||..+..+.++...|+++|++
T Consensus 80 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~ 155 (180)
T smart00822 80 GPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELT----RDLPLDFFVLFSSVAGVLGNPGQANYAAANAF 155 (180)
T ss_pred CCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHh----ccCCcceEEEEccHHHhcCCCCchhhHHHHHH
Confidence 78999999999876667778899999999999999999999988 33456899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCccc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIK 184 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~ 184 (202)
++.+++.++ +.|+++..+.||+++
T Consensus 156 ~~~~~~~~~----~~~~~~~~~~~g~~~ 179 (180)
T smart00822 156 LDALAAHRR----ARGLPATSINWGAWA 179 (180)
T ss_pred HHHHHHHHH----hcCCceEEEeecccc
Confidence 999988664 357889999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.4e-26 Score=178.65 Aligned_cols=150 Identities=23% Similarity=0.266 Sum_probs=129.1
Q ss_pred HHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCC
Q 028868 16 TVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV 95 (202)
Q Consensus 16 ~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~ 95 (202)
+|++|+++|++|++++|++++... ..++.+|++|.++++++++++. +++|+||||||....
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~----~~iD~li~nAG~~~~---- 61 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP----GRIDALFNIAGVPGT---- 61 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc----CCCeEEEECCCCCCC----
Confidence 478999999999999998765421 2356899999999999988763 579999999997521
Q ss_pred CCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc---------------------------CCCCCh
Q 028868 96 DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR---------------------------GIPSVS 148 (202)
Q Consensus 96 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~---------------------------~~~~~~ 148 (202)
+.++..+++|+.+++.+++.++|+|.+ .|+||++||.++.. +.++..
T Consensus 62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (241)
T PRK12428 62 ----APVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT 135 (241)
T ss_pred ----CCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence 347899999999999999999999964 48999999998763 566778
Q ss_pred hhhhhHHHHHHHHHHHH-HHHccCCcEEEEeeCCcccCCCccc
Q 028868 149 LYGAYKGAMNQLTKNLA-CEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la-~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.|++||++++++++.++ .|+.++||+||+|+||+++|+|..+
T Consensus 136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~ 178 (241)
T PRK12428 136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGD 178 (241)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCccccc
Confidence 99999999999999999 9999899999999999999999764
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.4e-25 Score=180.95 Aligned_cols=169 Identities=21% Similarity=0.194 Sum_probs=132.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||++++++|+++|++|++++|+++++.... .....++..+.+|++|.+++.+. + +++|
T Consensus 179 K~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~~~~v~~v~~Dvsd~~~v~~~-------l-~~ID 247 (406)
T PRK07424 179 KTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGEDLPVKTLHWQVGQEAALAEL-------L-EKVD 247 (406)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhcCCCeEEEEeeCCCHHHHHHH-------h-CCCC
Confidence 68999999999999999999999999999999876654332 22233567888999998876543 3 4799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC----CeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN----GSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
++|||||.... .+.+.+++++.+++|+.|++.++++++|.|++++. +.+|++|+ ++ ...+..+.|++||+|
T Consensus 248 iLInnAGi~~~---~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASKaA 322 (406)
T PRK07424 248 ILIINHGINVH---GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSKRA 322 (406)
T ss_pred EEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHHHH
Confidence 99999997532 35788999999999999999999999999986532 34555554 33 333455789999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+..+++ +.++. .++.+..+.||+++|++.
T Consensus 323 l~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~ 351 (406)
T PRK07424 323 LGDLVT-LRRLD--APCVVRKLILGPFKSNLN 351 (406)
T ss_pred HHHHHH-HHHhC--CCCceEEEEeCCCcCCCC
Confidence 999985 44442 457788899999999875
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.4e-24 Score=161.72 Aligned_cols=174 Identities=21% Similarity=0.323 Sum_probs=139.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh---hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
++||||+.||||..++++|+++|. +|++++|+. .......+++.+.+.++.++++|++|+++++++++.+.+.+ +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~-~ 80 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRF-G 80 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTS-S
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhcc-C
Confidence 799999999999999999999987 899999993 34556788888889999999999999999999999999998 8
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|+.|||+||.....++.+.+.++++..+...+.|..++.+.+ ...+...+|++||+++..+.++++.|+++.+.+
T Consensus 81 ~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~----~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~l 156 (181)
T PF08659_consen 81 PIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEAL----ENRPLDFFILFSSISSLLGGPGQSAYAAANAFL 156 (181)
T ss_dssp -EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHH----TTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHH
T ss_pred CcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHh----hcCCCCeEEEECChhHhccCcchHhHHHHHHHH
Confidence 9999999999988888999999999999999999999999987 335578999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIK 184 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~ 184 (202)
+.+++..+. .|.++.+|+-|..+
T Consensus 157 da~a~~~~~----~g~~~~sI~wg~W~ 179 (181)
T PF08659_consen 157 DALARQRRS----RGLPAVSINWGAWD 179 (181)
T ss_dssp HHHHHHHHH----TTSEEEEEEE-EBS
T ss_pred HHHHHHHHh----CCCCEEEEEccccC
Confidence 999886543 46778888877543
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.2e-23 Score=167.00 Aligned_cols=165 Identities=19% Similarity=0.201 Sum_probs=132.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++| ++|++.+|+..+.....+.+. ..++.++.+|++|.+++.++++ .
T Consensus 5 k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~--------~ 74 (324)
T TIGR03589 5 KSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR--------G 74 (324)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh--------c
Confidence 689999999999999999999986 689999988665444333332 2468889999999988877654 4
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|+|||+||.... +..+.+ .++.+++|+.|++++++++.+ .+.++||++||.....| ...|+++|++.+
T Consensus 75 iD~Vih~Ag~~~~-~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~~~~iV~~SS~~~~~p---~~~Y~~sK~~~E 143 (324)
T TIGR03589 75 VDYVVHAAALKQV-PAAEYN---PFECIRTNINGAQNVIDAAID----NGVKRVVALSTDKAANP---INLYGATKLASD 143 (324)
T ss_pred CCEEEECcccCCC-chhhcC---HHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeCCCCCCC---CCHHHHHHHHHH
Confidence 7999999997532 222222 356899999999999999854 34579999999754433 577999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.+++.++.+....|++++++.||++..|
T Consensus 144 ~l~~~~~~~~~~~gi~~~~lR~g~v~G~ 171 (324)
T TIGR03589 144 KLFVAANNISGSKGTRFSVVRYGNVVGS 171 (324)
T ss_pred HHHHHHHhhccccCcEEEEEeecceeCC
Confidence 9999998888788999999999999875
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.5e-22 Score=162.31 Aligned_cols=185 Identities=16% Similarity=0.066 Sum_probs=144.1
Q ss_pred CEEEEecCCCchHHH--HHHHHHHCCCEEEEEeCChhHH------------HHHHHHHHhcCCeEEEEEecCCCHHHHHH
Q 028868 1 MTALVTGGTRGIGHA--TVEELARFGAIVHTCSRNQIEL------------DARLHEWKNKGFKVTGSVCDLSSREQREK 66 (202)
Q Consensus 1 k~~lItGas~giG~a--~a~~l~~~g~~Vi~~~r~~~~~------------~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~ 66 (202)
|++||||+++|||.+ +|+.| +.|++|+++++..+.. +.+.+.+...+..+..+.+|+++++++++
T Consensus 42 K~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~ 120 (398)
T PRK13656 42 KKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQK 120 (398)
T ss_pred CEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 789999999999999 89999 9999998888533221 22344444556677889999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcCCCCCCCC-----------------C-----------------CCCCHHHHHHHHHHHhH-
Q 028868 67 LIETVTSIFQGKLNILINNAAIAFVKP-----------------T-----------------VDITAEDMSTVSSTNFE- 111 (202)
Q Consensus 67 ~~~~~~~~~~~~id~vi~~ag~~~~~~-----------------~-----------------~~~~~~~~~~~~~~n~~- 111 (202)
+++.+.+.+ ++||+||||+|...... + ...+.++++.++.+.=-
T Consensus 121 lie~I~e~~-G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgge 199 (398)
T PRK13656 121 VIELIKQDL-GQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGGE 199 (398)
T ss_pred HHHHHHHhc-CCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhccc
Confidence 999999999 79999999999873311 1 12455566655554322
Q ss_pred hHHHHH--HHHhHHHhcCCCCeEEEecCCCCccCCCCC--hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 112 SVFHLS--QLAHPLFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 112 ~~~~~~--~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.-..++ ....++|. ++++++.+|........|.+ ...+.+|++++..++.|+.++++.|+|+|.+.+|++.|.-
T Consensus 200 dw~~Wi~al~~a~lla--~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~A 277 (398)
T PRK13656 200 DWELWIDALDEAGVLA--EGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQA 277 (398)
T ss_pred hHHHHHHHHHhccccc--CCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchh
Confidence 223333 34446664 36899999999998888887 5899999999999999999999999999999999999975
Q ss_pred cc
Q 028868 188 IK 189 (202)
Q Consensus 188 ~~ 189 (202)
..
T Consensus 278 ss 279 (398)
T PRK13656 278 SS 279 (398)
T ss_pred hh
Confidence 54
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-22 Score=163.88 Aligned_cols=173 Identities=17% Similarity=0.086 Sum_probs=136.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+..........+. ...++.++.+|+++.+++.+++++ .++|
T Consensus 5 k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~------~~~d 77 (349)
T TIGR02622 5 KKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAE------FKPE 77 (349)
T ss_pred CEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhh------cCCC
Confidence 689999999999999999999999999999998765443333332 233577889999999998888875 3589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc------------CCCCCh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIPSVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~~~~ 148 (202)
+|||+|+.... ..+.+++...+++|+.+++.+++++.+ ....+++|++||...+. +..+..
T Consensus 78 ~vih~A~~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~ 150 (349)
T TIGR02622 78 IVFHLAAQPLV----RKSYADPLETFETNVMGTVNLLEAIRA---IGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHD 150 (349)
T ss_pred EEEECCccccc----ccchhCHHHHHHHhHHHHHHHHHHHHh---cCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCC
Confidence 99999996422 235566788899999999999998732 12256999999964321 123467
Q ss_pred hhhhhHHHHHHHHHHHHHHHcc----CCcEEEEeeCCcccCCC
Q 028868 149 LYGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~----~gi~v~~v~pG~v~t~~ 187 (202)
.|+.+|.+.+.+++.++.++.+ .|++++++.|+.+..|.
T Consensus 151 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~ 193 (349)
T TIGR02622 151 PYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGG 193 (349)
T ss_pred cchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCC
Confidence 8999999999999999988754 48999999999999874
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.4e-22 Score=167.02 Aligned_cols=169 Identities=18% Similarity=0.221 Sum_probs=133.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-----cC----CeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-----KG----FKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-----~~----~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
|++|||||+|+||++++++|+++|++|++++|+.+++..+.+++.. .+ .++.++.+|++|.+++.+.
T Consensus 81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a---- 156 (576)
T PLN03209 81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA---- 156 (576)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH----
Confidence 6899999999999999999999999999999999888776665532 11 3588999999998887543
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhh
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLY 150 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y 150 (202)
+ +.+|+|||++|.... ...++...+++|+.|..++++++. +.+.++||++||.++. .+.+. ..|
T Consensus 157 ---L-ggiDiVVn~AG~~~~------~v~d~~~~~~VN~~Gt~nLl~Aa~----~agVgRIV~VSSiga~~~g~p~-~~~ 221 (576)
T PLN03209 157 ---L-GNASVVICCIGASEK------EVFDVTGPYRIDYLATKNLVDAAT----VAKVNHFILVTSLGTNKVGFPA-AIL 221 (576)
T ss_pred ---h-cCCCEEEEccccccc------cccchhhHHHHHHHHHHHHHHHHH----HhCCCEEEEEccchhcccCccc-cch
Confidence 3 468999999996531 122467788999999999998874 3456899999998764 23222 224
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
. +|.++..+.+.+..++...||+++.|+||+++|++..
T Consensus 222 ~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~ 259 (576)
T PLN03209 222 N-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDA 259 (576)
T ss_pred h-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccc
Confidence 4 7888888888888888889999999999999987643
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.5e-21 Score=156.58 Aligned_cols=171 Identities=13% Similarity=0.099 Sum_probs=133.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++|++|++++|+.+............ ..++.++.+|+++.++++++++ .
T Consensus 6 k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~ 77 (325)
T PLN02989 6 KVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID--------G 77 (325)
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc--------C
Confidence 68999999999999999999999999999988876554433222211 2468889999999988777664 4
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC-------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP------------- 145 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------- 145 (202)
+|+|||+||.... ..+.+.+...+++|+.+++.+++++.+.+ +.++||++||..+..+..
T Consensus 78 ~d~vih~A~~~~~----~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~ 150 (325)
T PLN02989 78 CETVFHTASPVAI----TVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVVDETF 150 (325)
T ss_pred CCEEEEeCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCccCcCC
Confidence 7999999996431 23445678899999999999999987653 246999999986543211
Q ss_pred ---------CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 146 ---------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 146 ---------~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
....|+.+|.+.+.+++.+..++ |+.++.+.|+.+..|...
T Consensus 151 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~ 200 (325)
T PLN02989 151 FTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQ 200 (325)
T ss_pred CCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCC
Confidence 12469999999999999887664 799999999999987654
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=136.76 Aligned_cols=138 Identities=22% Similarity=0.235 Sum_probs=112.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|+++.+....+++...+..+.++.+|+++.++++++++++.+.+ +++|
T Consensus 17 k~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~-G~iD 95 (169)
T PRK06720 17 KVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF-SRID 95 (169)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 679999999999999999999999999999999888877777776656678889999999999999999999888 7899
Q ss_pred EEEEcCCCCCCCCC-CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-------CCeEEEecCCCCcc
Q 028868 81 ILINNAAIAFVKPT-VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-------NGSIVFISSVGGVR 142 (202)
Q Consensus 81 ~vi~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-------~~~iv~vsS~~~~~ 142 (202)
++|||||.....+. .+.+.++ ++ .+|+.+.+..++.+.++|.+++ .|++..+|+.+...
T Consensus 96 ilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (169)
T PRK06720 96 MLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF 162 (169)
T ss_pred EEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence 99999998764443 3335444 44 6677777888888888876542 47888888876543
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.3e-20 Score=147.61 Aligned_cols=171 Identities=18% Similarity=0.142 Sum_probs=136.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH--HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR--LHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~--~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
++|+||||||.||++++++|+++||+|..+.|++++.++. +.+++....+...+..|+.+++++..+++ .
T Consensus 7 ~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~--------g 78 (327)
T KOG1502|consen 7 KKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID--------G 78 (327)
T ss_pred cEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh--------C
Confidence 5799999999999999999999999999999999886553 44555445568999999999999888887 3
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCC-CC----------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI-PS---------- 146 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-~~---------- 146 (202)
.|+|+|.|.-..... .+.-.+.++..+.|+.++++++ ++.+ ..+||++||.++.... +.
T Consensus 79 cdgVfH~Asp~~~~~-----~~~e~~li~pav~Gt~nVL~ac----~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~ 149 (327)
T KOG1502|consen 79 CDGVFHTASPVDFDL-----EDPEKELIDPAVKGTKNVLEAC----KKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEE 149 (327)
T ss_pred CCEEEEeCccCCCCC-----CCcHHhhhhHHHHHHHHHHHHH----hccCCcceEEEeccHHHhccCCcCCCCCcccccc
Confidence 899999998543221 1123478899999999999998 4443 6899999999987654 21
Q ss_pred -----------ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 147 -----------VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 147 -----------~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
...|..||.-.+.-+..++.|. |+...+|.||.|..|...+.
T Consensus 150 ~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~---~~~lv~inP~lV~GP~l~~~ 202 (327)
T KOG1502|consen 150 SWSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN---GLDLVTINPGLVFGPGLQPS 202 (327)
T ss_pred cCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC---CccEEEecCCceECCCcccc
Confidence 1248888877777777777763 79999999999999988773
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-19 Score=148.54 Aligned_cols=173 Identities=20% Similarity=0.143 Sum_probs=130.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+.+......+.+.. +.++.++.+|+++.+.+.+++. .+|
T Consensus 11 ~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~--------~~d 81 (353)
T PLN02896 11 GTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK--------GCD 81 (353)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc--------CCC
Confidence 5899999999999999999999999999999987665555444432 4568889999999888766653 479
Q ss_pred EEEEcCCCCCCCC-CCCCCHHHH--HHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-------------
Q 028868 81 ILINNAAIAFVKP-TVDITAEDM--STVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------- 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~-~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------- 144 (202)
+|||+|+...... ....+.+.+ ..+++.|+.|+..+++++.+.. ..+++|++||.+.+...
T Consensus 82 ~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~ 158 (353)
T PLN02896 82 GVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVVDET 158 (353)
T ss_pred EEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCccCcc
Confidence 9999999754321 112233332 4577888899999999885432 24689999997544211
Q ss_pred ------------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 ------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ------------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
++...|+.||.+.+.+++.++.++ |+++.++.|+.+..|..
T Consensus 159 ~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 159 CQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFL 211 (353)
T ss_pred cCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCc
Confidence 112379999999999999887764 79999999999988754
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.86 E-value=8e-20 Score=146.19 Aligned_cols=169 Identities=12% Similarity=0.032 Sum_probs=126.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|+||++++++|+++|++|+++.|+.+ +.......+...+.++.++.+|++|.+++.+++. .
T Consensus 7 k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~--------~ 78 (297)
T PLN02583 7 KSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK--------G 78 (297)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc--------C
Confidence 68999999999999999999999999999998643 2223333332223468889999999888765543 4
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-C------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-P------------ 145 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~------------ 145 (202)
.|.++|.++... +.+ +++++++++|+.|++++++++.+.+ ..++||++||.++.... +
T Consensus 79 ~d~v~~~~~~~~-----~~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~ 149 (297)
T PLN02583 79 CSGLFCCFDPPS-----DYP-SYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKDVDERS 149 (297)
T ss_pred CCEEEEeCccCC-----ccc-ccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCCCCccc
Confidence 688888765321 111 2467899999999999999986653 24799999998664311 0
Q ss_pred -C--------ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 146 -S--------VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 146 -~--------~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
. ...|+.||...+.+++.++.+ .|++++++.|++|.+|...
T Consensus 150 ~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~ 199 (297)
T PLN02583 150 WSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLT 199 (297)
T ss_pred CCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCC
Confidence 0 015999999999999888665 3799999999999988653
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.9e-20 Score=148.38 Aligned_cols=170 Identities=16% Similarity=0.133 Sum_probs=128.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|+||++++++|+++|++|+++.|+.+......+.... ...++.++.+|+++.+++.++++ .
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~ 77 (322)
T PLN02986 6 KLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE--------G 77 (322)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh--------C
Confidence 6899999999999999999999999999999887654433322221 12468889999999888777665 3
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-CC-------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GI------------- 144 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~------------- 144 (202)
+|+|||+|+..... ..+.....+++|+.|+.++++++... .+.++||++||..+.. +.
T Consensus 78 ~d~vih~A~~~~~~-----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~ 149 (322)
T PLN02986 78 CDAVFHTASPVFFT-----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDVVDETF 149 (322)
T ss_pred CCEEEEeCCCcCCC-----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCCcCccc
Confidence 79999999964221 11223567899999999999987321 1356999999986431 11
Q ss_pred ---C-----CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 145 ---P-----SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 145 ---~-----~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
| +...|+.||.+.+.+++.+..++ |+.++++.|+.+.+|...
T Consensus 150 ~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~ 199 (322)
T PLN02986 150 FSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQ 199 (322)
T ss_pred CCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCC
Confidence 0 13569999999999999887664 799999999999988654
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.7e-20 Score=149.11 Aligned_cols=170 Identities=19% Similarity=0.148 Sum_probs=128.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++|++|++++|+.+............ ..++.++..|++|.+++.++++ .
T Consensus 6 k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~--------~ 77 (351)
T PLN02650 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR--------G 77 (351)
T ss_pred CEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh--------C
Confidence 68999999999999999999999999999999876554443322211 1357889999999888776654 3
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC----C---------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----P--------- 145 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----~--------- 145 (202)
+|.|||+|+..... ..+..+..+++|+.+++++++++.+.. ..++||++||.....+. +
T Consensus 78 ~d~ViH~A~~~~~~-----~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~ 149 (351)
T PLN02650 78 CTGVFHVATPMDFE-----SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDEDCWSD 149 (351)
T ss_pred CCEEEEeCCCCCCC-----CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcccCCc
Confidence 79999999854211 112235778899999999999985432 13589999997533210 0
Q ss_pred ---------CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 146 ---------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 146 ---------~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+...|+.||.+.+.+++.++.+ .|++++.+.|+.+.+|...
T Consensus 150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~ 199 (351)
T PLN02650 150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFIS 199 (351)
T ss_pred hhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCC
Confidence 1237999999999999988776 4799999999999998643
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-19 Score=147.51 Aligned_cols=164 Identities=20% Similarity=0.134 Sum_probs=127.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR-LHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~-~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+|+||++++++|+++|++|++++|+.+..... ...+.....++.++.+|++|.+++.++++ .+
T Consensus 11 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~ 82 (342)
T PLN02214 11 KTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID--------GC 82 (342)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh--------cC
Confidence 5799999999999999999999999999999986643221 22332222357888999999888777665 37
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC----C----------
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI----P---------- 145 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~----~---------- 145 (202)
|+|||+|+... +++.+.+++|+.|+..+++++. +.+.++||++||..+..+. +
T Consensus 83 d~Vih~A~~~~---------~~~~~~~~~nv~gt~~ll~aa~----~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~ 149 (342)
T PLN02214 83 DGVFHTASPVT---------DDPEQMVEPAVNGAKFVINAAA----EAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWS 149 (342)
T ss_pred CEEEEecCCCC---------CCHHHHHHHHHHHHHHHHHHHH----hcCCCEEEEeccceeeeccCCCCCCcccCcccCC
Confidence 99999999531 2356788999999999999884 3445699999997543311 0
Q ss_pred -------CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 146 -------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 146 -------~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+...|+.||.+.+.+++.++.++ |+++..+.|+.+..|..
T Consensus 150 ~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~ 196 (342)
T PLN02214 150 DLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPL 196 (342)
T ss_pred ChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCC
Confidence 23479999999999999887764 79999999999988754
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.84 E-value=3e-19 Score=149.88 Aligned_cols=174 Identities=16% Similarity=0.111 Sum_probs=128.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh---H----H---------HHHHHHHH-hcCCeEEEEEecCCCHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI---E----L---------DARLHEWK-NKGFKVTGSVCDLSSREQ 63 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~---~----~---------~~~~~~~~-~~~~~v~~~~~Dv~~~~~ 63 (202)
|++|||||+|+||++++++|+++|++|+++++... . . ...++.+. ..+.++.++.+|++|.+.
T Consensus 48 k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d~~~ 127 (442)
T PLN02572 48 KKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICDFEF 127 (442)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCCHHH
Confidence 67999999999999999999999999999874311 0 0 01111111 113458899999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC-CeEEEecCCCCcc
Q 028868 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVR 142 (202)
Q Consensus 64 i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~ 142 (202)
+.++++. .++|+|||+|+... .+....+.++++..+++|+.|++++++++.. .+. .++|++||...+.
T Consensus 128 v~~~l~~------~~~D~ViHlAa~~~-~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~----~gv~~~~V~~SS~~vYG 196 (442)
T PLN02572 128 LSEAFKS------FEPDAVVHFGEQRS-APYSMIDRSRAVFTQHNNVIGTLNVLFAIKE----FAPDCHLVKLGTMGEYG 196 (442)
T ss_pred HHHHHHh------CCCCEEEECCCccc-ChhhhcChhhHHHHHHHHHHHHHHHHHHHHH----hCCCccEEEEecceecC
Confidence 8888875 26899999997643 2333445566788899999999999998743 223 4899999875331
Q ss_pred ------------------------CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 143 ------------------------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 143 ------------------------~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+..+...|+.||.+.+.+.+.++.. .|+.+..+.|+.+..|..
T Consensus 197 ~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 197 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRT 263 (442)
T ss_pred CCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCC
Confidence 1113457999999999999887765 479999999999988753
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-19 Score=145.40 Aligned_cols=167 Identities=20% Similarity=0.152 Sum_probs=126.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH--HHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH--EWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~--~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|+||++++++|+++|++|++++|+.+....... .+.. ..++.++.+|++|.+++.++++ .
T Consensus 10 ~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~--------~ 80 (338)
T PLN00198 10 KTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA--------G 80 (338)
T ss_pred CeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh--------c
Confidence 679999999999999999999999999988887654433221 1211 1257889999999888776554 4
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC---------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--------------- 143 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------------- 143 (202)
+|+|||+|+... .. ..+.....+++|+.|+..+++++.+. .+.+++|++||.+.+..
T Consensus 81 ~d~vih~A~~~~---~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~ 152 (338)
T PLN00198 81 CDLVFHVATPVN---FA--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMNEKNW 152 (338)
T ss_pred CCEEEEeCCCCc---cC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceeccccC
Confidence 799999998532 11 12334567889999999999998442 13579999999764431
Q ss_pred ---------CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 144 ---------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 144 ---------~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.++...|+.||.+.+.+++.++.+ .|+.+..+.|+.+..|.
T Consensus 153 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~ 202 (338)
T PLN00198 153 TDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPS 202 (338)
T ss_pred CchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCC
Confidence 123567999999999999988766 37999999999998875
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.84 E-value=8e-20 Score=148.69 Aligned_cols=173 Identities=20% Similarity=0.107 Sum_probs=125.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHH----hcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-ARLHEWK----NKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~----~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||+|+||++++++|+++|++|++++|+++... ...+.+. ..+.++.++.+|++|.+++.++++..
T Consensus 7 ~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 82 (340)
T PLN02653 7 KVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI---- 82 (340)
T ss_pred CEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc----
Confidence 68999999999999999999999999999998754311 1122221 12346889999999999998888763
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCcc----------CC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR----------GI 144 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~----------~~ 144 (202)
.+|+|||+|+..... ...++.+..+++|+.|+..+++++.++..+++ .-++|++||...+. +.
T Consensus 83 --~~d~Vih~A~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~ 156 (340)
T PLN02653 83 --KPDEVYNLAAQSHVA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPF 156 (340)
T ss_pred --CCCEEEECCcccchh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCC
Confidence 589999999975432 23344577788999999999999987764321 13788888753221 11
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHcc---CCcEEEEeeCCcc
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAK---DNIRTNTVAPWVI 183 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~---~gi~v~~v~pG~v 183 (202)
.+...|+.||.+.+.+++.++.+++- .++.++.+.|+..
T Consensus 157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~ 198 (340)
T PLN02653 157 HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG 198 (340)
T ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence 24568999999999999999888642 2345555666643
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=147.45 Aligned_cols=172 Identities=16% Similarity=0.114 Sum_probs=127.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEE-EEeCChhH--HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVH-TCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi-~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+|+||++++++|+++|+.|+ +.+|.... .... ..+ ....++.++.+|++|.++++++++. .
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 73 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL-APV-AQSERFAFEKVDICDRAELARVFTE------H 73 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh-hhc-ccCCceEEEECCCcChHHHHHHHhh------c
Confidence 6899999999999999999999998754 55554321 1111 111 1233577889999999998888775 3
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHh---c--CCCCeEEEecCCCCcc----------
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK---A--SGNGSIVFISSVGGVR---------- 142 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~--~~~~~iv~vsS~~~~~---------- 142 (202)
.+|+|||+||.... ..+.++++..+++|+.|+..+++++.+.+. . .+..++|++||.+.+.
T Consensus 74 ~~D~Vih~A~~~~~----~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 149 (355)
T PRK10217 74 QPDCVMHLAAESHV----DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT 149 (355)
T ss_pred CCCEEEECCcccCc----chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence 68999999996532 234466789999999999999999977542 1 1235899999964221
Q ss_pred ---CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 143 ---GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 143 ---~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+..+...|+.||.+.+.+++.++.++ ++++..+.|+.+..|-
T Consensus 150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~ 194 (355)
T PRK10217 150 ETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPY 194 (355)
T ss_pred CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCC
Confidence 22346789999999999999998775 6788888888887654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.6e-19 Score=144.45 Aligned_cols=157 Identities=20% Similarity=0.080 Sum_probs=115.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~-~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||+|+||++++++|+++|++|++++|+.+. +........ ..+.++.++.+|++|.+++.++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--- 77 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI--- 77 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence 789999999999999999999999999999987542 211111110 11345889999999999988888852
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------C
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------G 143 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~ 143 (202)
++|+|||+|+...... ..+.....+++|+.|+..+++++.+.=.+ +..++|++||...+. +
T Consensus 78 ---~~d~ViH~Aa~~~~~~----~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~E~~~ 149 (343)
T TIGR01472 78 ---KPTEIYNLAAQSHVKV----SFEIPEYTADVDGIGTLRLLEAVRTLGLI-KSVKFYQASTSELYGKVQEIPQNETTP 149 (343)
T ss_pred ---CCCEEEECCcccccch----hhhChHHHHHHHHHHHHHHHHHHHHhCCC-cCeeEEEeccHHhhCCCCCCCCCCCCC
Confidence 5899999999754321 22334567789999999999998552100 123799999964221 1
Q ss_pred CCCChhhhhhHHHHHHHHHHHHHHH
Q 028868 144 IPSVSLYGAYKGAMNQLTKNLACEW 168 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~~~~la~e~ 168 (202)
..+...|+.||.+.+.+++.++.++
T Consensus 150 ~~p~~~Y~~sK~~~e~~~~~~~~~~ 174 (343)
T TIGR01472 150 FYPRSPYAAAKLYAHWITVNYREAY 174 (343)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHh
Confidence 2256789999999999999998876
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-19 Score=141.44 Aligned_cols=170 Identities=15% Similarity=0.152 Sum_probs=125.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH--hcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++|++|++++|+.+.......... ....++.++.+|++|.+++.++++ .
T Consensus 5 ~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~ 76 (322)
T PLN02662 5 KVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD--------G 76 (322)
T ss_pred CEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc--------C
Confidence 689999999999999999999999999999988654333222111 112468889999999887766654 4
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-c-CC------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-R-GI------------ 144 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~-~~------------ 144 (202)
+|+|||+|+..... . . +..+..+++|+.++..+++++.... +..++|++||.++. . +.
T Consensus 77 ~d~Vih~A~~~~~~--~-~--~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~ 148 (322)
T PLN02662 77 CEGVFHTASPFYHD--V-T--DPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVVDETW 148 (322)
T ss_pred CCEEEEeCCcccCC--C-C--ChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcCCccc
Confidence 79999999864211 1 1 1224788999999999999874321 35689999997531 1 11
Q ss_pred ---CC-----ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 145 ---PS-----VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 145 ---~~-----~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|. ...|+.+|.+.+.+++.+..+ .|++++.+.|+.+.+|...
T Consensus 149 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~ 198 (322)
T PLN02662 149 FSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQ 198 (322)
T ss_pred CCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCC
Confidence 10 147999999999998877655 3799999999999988643
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.9e-18 Score=143.96 Aligned_cols=168 Identities=23% Similarity=0.237 Sum_probs=144.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+|.||+++|+++++.+. ++++.+|++.+.-...+++.+. ..+..++-+|+.|.+.++.+++. -
T Consensus 251 K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~------~ 324 (588)
T COG1086 251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG------H 324 (588)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc------C
Confidence 7999999999999999999999987 7889999999998888888764 45788999999999999998885 4
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
++|+|+|+|+......++. ++.+.+.+|+.|+.++++++ .+++..++|++|+--+..| ...|+++|+..
T Consensus 325 kvd~VfHAAA~KHVPl~E~----nP~Eai~tNV~GT~nv~~aa----~~~~V~~~V~iSTDKAV~P---tNvmGaTKr~a 393 (588)
T COG1086 325 KVDIVFHAAALKHVPLVEY----NPEEAIKTNVLGTENVAEAA----IKNGVKKFVLISTDKAVNP---TNVMGATKRLA 393 (588)
T ss_pred CCceEEEhhhhccCcchhc----CHHHHHHHhhHhHHHHHHHH----HHhCCCEEEEEecCcccCC---chHhhHHHHHH
Confidence 7999999999876544443 34566779999999999998 5566789999999887777 47899999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
+.++++++....+.+-++..|.=|.|-.
T Consensus 394 E~~~~a~~~~~~~~~T~f~~VRFGNVlG 421 (588)
T COG1086 394 EKLFQAANRNVSGTGTRFCVVRFGNVLG 421 (588)
T ss_pred HHHHHHHhhccCCCCcEEEEEEecceec
Confidence 9999999998765578999999998854
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=3.2e-18 Score=139.04 Aligned_cols=168 Identities=18% Similarity=0.145 Sum_probs=122.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+|+||++++++|+++|++|++++|..+........+... +.++.++.+|++|.+++.++++. .++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~ 74 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD------HAI 74 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc------CCC
Confidence 68999999999999999999999999999876533322222222221 33567788999999988888763 369
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------C-CCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------I-PSV 147 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~-~~~ 147 (202)
|+|||+|+...... ..+...+.+++|+.++..+++++ ++.+.+++|++||...+.. . .+.
T Consensus 75 d~vvh~a~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~ 146 (338)
T PRK10675 75 DTVIHFAGLKAVGE----SVQKPLEYYDNNVNGTLRLISAM----RAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQ 146 (338)
T ss_pred CEEEECCccccccc----hhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeccHHhhCCCCCCccccccCCCCCC
Confidence 99999999754322 22334567889999999998865 4445678999999653211 0 236
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCccc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK 184 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~ 184 (202)
..|+.+|.+.+.+++.++.+.. ++++..+.|+.+.
T Consensus 147 ~~Y~~sK~~~E~~~~~~~~~~~--~~~~~ilR~~~v~ 181 (338)
T PRK10675 147 SPYGKSKLMVEQILTDLQKAQP--DWSIALLRYFNPV 181 (338)
T ss_pred ChhHHHHHHHHHHHHHHHHhcC--CCcEEEEEeeeec
Confidence 7899999999999999876642 4666666654443
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.4e-19 Score=140.53 Aligned_cols=166 Identities=22% Similarity=0.265 Sum_probs=124.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--C--C--eEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--G--F--KVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~--~--~--~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
||||||+|.||+++|++|++.+. +++++++++.++-...+++... + . .+..+.+|+.|.+.+..++++
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~----- 75 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE----- 75 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh-----
Confidence 79999999999999999999985 8999999999999988888532 1 2 234567899999998888875
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
.++|+|+|.|+.-.....+. ...+.+++|+.|+.++++++ .+.+..++|++|+--+..| ...|++||+
T Consensus 76 -~~pdiVfHaAA~KhVpl~E~----~p~eav~tNv~GT~nv~~aa----~~~~v~~~v~ISTDKAv~P---tnvmGatKr 143 (293)
T PF02719_consen 76 -YKPDIVFHAAALKHVPLMED----NPFEAVKTNVLGTQNVAEAA----IEHGVERFVFISTDKAVNP---TNVMGATKR 143 (293)
T ss_dssp --T-SEEEE------HHHHCC----CHHHHHHHHCHHHHHHHHHH----HHTT-SEEEEEEECGCSS-----SHHHHHHH
T ss_pred -cCCCEEEEChhcCCCChHHh----CHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEccccccCCC---CcHHHHHHH
Confidence 47999999999865533333 45677889999999999998 4456789999999877665 588999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
..+.+.+.++......+.++.+|.-|.|--
T Consensus 144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlg 173 (293)
T PF02719_consen 144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLG 173 (293)
T ss_dssp HHHHHHHHHCCTSSSS--EEEEEEE-EETT
T ss_pred HHHHHHHHHhhhCCCCCcEEEEEEecceec
Confidence 999999999998877789999999998854
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.6e-18 Score=137.88 Aligned_cols=167 Identities=20% Similarity=0.200 Sum_probs=122.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH----hcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK----NKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~----~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++||||+|+||.+++++|+++|++|++++|.........+.+. ..+.++.++.+|++|.+++.++++.
T Consensus 6 ~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~------ 79 (352)
T PLN02240 6 RTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS------ 79 (352)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh------
Confidence 689999999999999999999999999999875432222212221 1234678899999999998888775
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CCC
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIP 145 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~ 145 (202)
..+|+|||+|+..... .+.+++...++.|+.++..+++++ .+.+.+++|++||...+. +..
T Consensus 80 ~~~d~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~ 151 (352)
T PLN02240 80 TRFDAVIHFAGLKAVG----ESVAKPLLYYDNNLVGTINLLEVM----AKHGCKKLVFSSSATVYGQPEEVPCTEEFPLS 151 (352)
T ss_pred CCCCEEEEccccCCcc----ccccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCC
Confidence 3689999999975322 233466788999999999998865 444457899999964321 112
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI 183 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v 183 (202)
+...|+.+|.+.+.+++.++.+. .++.+..+.|+.+
T Consensus 152 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v 187 (352)
T PLN02240 152 ATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNP 187 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCc
Confidence 45689999999999999887652 3566666665433
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.7e-18 Score=138.86 Aligned_cols=172 Identities=17% Similarity=0.144 Sum_probs=124.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCCh--hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
+++|||||+|+||.+++++|+++|++ |+.+++.. ....... .+. .+.++.++.+|++|.+++.+++++ .
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~ 72 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQ------H 72 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHh------c
Confidence 57999999999999999999999975 55555532 1121111 111 134577889999999999888875 3
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-----CCCeEEEecCCCCcc----------
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-----GNGSIVFISSVGGVR---------- 142 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~~~~~---------- 142 (202)
.+|+|||+|+...... +.+..+.++++|+.|+..+++++.++|.+. +..++|++||...+.
T Consensus 73 ~~d~vih~A~~~~~~~----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 148 (352)
T PRK10084 73 QPDAVMHLAAESHVDR----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVEN 148 (352)
T ss_pred CCCEEEECCcccCCcc----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccc
Confidence 6999999999653211 223446789999999999999998776421 235899999964221
Q ss_pred -----------CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 143 -----------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 143 -----------~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+..+...|+.||.+.+.+++.++.++ |+++..+.|+.+..|.
T Consensus 149 ~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~ 201 (352)
T PRK10084 149 SEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPY 201 (352)
T ss_pred cccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCC
Confidence 11245689999999999999988775 5777778888776654
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.2e-18 Score=138.11 Aligned_cols=168 Identities=15% Similarity=0.110 Sum_probs=125.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-----KGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||+|.||.+++++|+++|++|++++|...........+.. ...++.++.+|+.|.+++.++++
T Consensus 16 ~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~------ 89 (348)
T PRK15181 16 KRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK------ 89 (348)
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh------
Confidence 6799999999999999999999999999999865432222222211 11357789999999877666554
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------C
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------I 144 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~ 144 (202)
.+|+|||.|+..... .+.++....+++|+.|+..+++++ ++.+..++|++||...+.. .
T Consensus 90 --~~d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 159 (348)
T PRK15181 90 --NVDYVLHQAALGSVP----RSLKDPIATNSANIDGFLNMLTAA----RDAHVSSFTYAASSSTYGDHPDLPKIEERIG 159 (348)
T ss_pred --CCCEEEECccccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeechHhhCCCCCCCCCCCCCC
Confidence 379999999975321 122334567889999999999887 4445569999998743321 1
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+...|+.+|.+.+.+++.++.+ .|+++..+.|+.+..|.
T Consensus 160 ~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~ 199 (348)
T PRK15181 160 RPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRR 199 (348)
T ss_pred CCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcC
Confidence 13468999999999999887655 37999999999998764
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.8e-18 Score=137.87 Aligned_cols=168 Identities=15% Similarity=0.104 Sum_probs=124.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||+|+||.+++++|+++|++|+++.|+.+....+ .++... ...+.++.+|++|.+++.++++.
T Consensus 54 k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~---- 128 (367)
T PLN02686 54 RLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG---- 128 (367)
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh----
Confidence 6899999999999999999999999999988887655443 232211 12578899999999988877753
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC-cc------C---
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG-VR------G--- 143 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~-~~------~--- 143 (202)
+|.++|.++......... ......++|+.++..+++++ .+. +..++|++||.++ .+ .
T Consensus 129 ----~d~V~hlA~~~~~~~~~~----~~~~~~~~nv~gt~~llea~----~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~ 196 (367)
T PLN02686 129 ----CAGVFHTSAFVDPAGLSG----YTKSMAELEAKASENVIEAC----VRTESVRKCVFTSSLLACVWRQNYPHDLPP 196 (367)
T ss_pred ----ccEEEecCeeeccccccc----ccchhhhhhHHHHHHHHHHH----HhcCCccEEEEeccHHHhcccccCCCCCCc
Confidence 588999888653322111 11244568999999999887 332 3568999999631 11 0
Q ss_pred -------------CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 144 -------------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 144 -------------~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
..+...|+.||.+.+.+++.++.+ .|++++++.|++|.+|..
T Consensus 197 ~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~ 251 (367)
T PLN02686 197 VIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGF 251 (367)
T ss_pred ccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCC
Confidence 012346999999999999988766 489999999999999854
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.5e-18 Score=132.53 Aligned_cols=149 Identities=23% Similarity=0.241 Sum_probs=120.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|||||+|-||++++++|++.|++|+++++-.......+.... ..+++.|+.|..-+.+++++ .+||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~------~~id 69 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEE------NKID 69 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHh------cCCC
Confidence 689999999999999999999999999999986544444443321 67899999999999999887 5899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC------------CCh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP------------SVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~ 148 (202)
.|||.||....+ .+.+...+.++.|+.|++.+++++ .+.+...+||-|| ++.++.| +..
T Consensus 70 aViHFAa~~~Vg----ESv~~Pl~Yy~NNv~gTl~Ll~am----~~~gv~~~vFSSt-AavYG~p~~~PI~E~~~~~p~N 140 (329)
T COG1087 70 AVVHFAASISVG----ESVQNPLKYYDNNVVGTLNLIEAM----LQTGVKKFIFSST-AAVYGEPTTSPISETSPLAPIN 140 (329)
T ss_pred EEEECccccccc----hhhhCHHHHHhhchHhHHHHHHHH----HHhCCCEEEEecc-hhhcCCCCCcccCCCCCCCCCC
Confidence 999999987655 356667788889999999999876 6666677887555 5554333 456
Q ss_pred hhhhhHHHHHHHHHHHHHHHc
Q 028868 149 LYGAYKGAMNQLTKNLACEWA 169 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~ 169 (202)
+|+.||.+.+.+.+.++...+
T Consensus 141 PYG~sKlm~E~iL~d~~~a~~ 161 (329)
T COG1087 141 PYGRSKLMSEEILRDAAKANP 161 (329)
T ss_pred cchhHHHHHHHHHHHHHHhCC
Confidence 899999999999999988764
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.8e-17 Score=133.07 Aligned_cols=169 Identities=17% Similarity=0.111 Sum_probs=124.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 2 TALVTGGTRGIGHATVEELARFG--AIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
+++||||+|+||.+++++|++.| ++|++.+|... ......+.+.. ..++.++.+|++|++++.++++. ..
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~------~~ 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTE------HQ 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhh------cC
Confidence 48999999999999999999987 68988876421 11111222211 23577889999999999888764 25
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc------------CCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIPS 146 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~~ 146 (202)
+|+|||+|+..... .+.+..+..+++|+.++..+++++.+.+. ..+++++||...+. +..+
T Consensus 74 ~d~vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~ 146 (317)
T TIGR01181 74 PDAVVHFAAESHVD----RSISGPAAFIETNVVGTYTLLEAVRKYWH---EFRFHHISTDEVYGDLEKGDAFTETTPLAP 146 (317)
T ss_pred CCEEEEcccccCch----hhhhCHHHHHHHHHHHHHHHHHHHHhcCC---CceEEEeeccceeCCCCCCCCcCCCCCCCC
Confidence 89999999965321 23455678899999999999988744322 24799999854221 1123
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
...|+.+|.+.+.+++.++.+. ++++..+.|+.+..+.
T Consensus 147 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~ 184 (317)
T TIGR01181 147 SSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPY 184 (317)
T ss_pred CCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCC
Confidence 4579999999999999887764 6899999999887664
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.2e-17 Score=133.02 Aligned_cols=168 Identities=21% Similarity=0.220 Sum_probs=124.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
++|||||+|+||.+++++|+++|++|++++|...........+...+ .+..+.+|+++.+++.++++. .++|+
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~------~~~d~ 73 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE------HKIDA 73 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh------CCCcE
Confidence 47999999999999999999999999988764332222222222212 577889999999999888774 47999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChhh
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSLY 150 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~y 150 (202)
+||+||.....+ ..++..+.++.|+.++..+++++ .+.+.+++|++||...+.. ..+...|
T Consensus 74 vv~~ag~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y 145 (328)
T TIGR01179 74 VIHFAGLIAVGE----SVQDPLKYYRNNVVNTLNLLEAM----QQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPY 145 (328)
T ss_pred EEECccccCcch----hhcCchhhhhhhHHHHHHHHHHH----HhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCch
Confidence 999999753322 23345567889999999998876 4444578999988643221 1134679
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
+.+|++.+.+++.++.+. .++++..+.|+.+..+
T Consensus 146 ~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~ 179 (328)
T TIGR01179 146 GRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGA 179 (328)
T ss_pred HHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCC
Confidence 999999999999987662 4799999999877665
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4e-17 Score=127.53 Aligned_cols=165 Identities=17% Similarity=0.095 Sum_probs=112.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+|+||++++++|+++|++|+++.|++++...... .+.++.++.+|+++. +++ .+. ++..+
T Consensus 18 ~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l---~~~----~~~~~ 86 (251)
T PLN00141 18 KTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKL---VEA----IGDDS 86 (251)
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHH---HHH----hhcCC
Confidence 679999999999999999999999999999999766543321 133688899999983 322 222 21258
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc---CCCCChhhhhhHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR---GIPSVSLYGAYKGA 156 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~---~~~~~~~y~asK~a 156 (202)
|.||+++|...... +.+ .+++|..+...+++++ .+.+.++||++||...+. +.+....|...|.+
T Consensus 87 d~vi~~~g~~~~~~----~~~----~~~~n~~~~~~ll~a~----~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~ 154 (251)
T PLN00141 87 DAVICATGFRRSFD----PFA----PWKVDNFGTVNLVEAC----RKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLF 154 (251)
T ss_pred CEEEECCCCCcCCC----CCC----ceeeehHHHHHHHHHH----HHcCCCEEEEEccccccCCCcccccCcchhHHHHH
Confidence 99999998642111 111 1357888888888876 445568999999986332 22233456666654
Q ss_pred HHHH-HHHHHHH-HccCCcEEEEeeCCcccCCCc
Q 028868 157 MNQL-TKNLACE-WAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 157 ~~~~-~~~la~e-~~~~gi~v~~v~pG~v~t~~~ 188 (202)
...+ .+..+.+ +...|++++.|.||++.+++.
T Consensus 155 ~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~ 188 (251)
T PLN00141 155 GLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPP 188 (251)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCC
Confidence 4333 2333332 356789999999999987653
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=133.60 Aligned_cols=160 Identities=24% Similarity=0.188 Sum_probs=123.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||.+++++|+++|++|++++|+++..... . ...+.++.+|++|.++++++++ .+|
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~--------~~d 66 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA--------GCR 66 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh--------CCC
Confidence 6899999999999999999999999999999987553221 1 1247788999999988777654 479
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC---------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP--------------- 145 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~--------------- 145 (202)
+|||+++.... ..++++..+++|+.++..+++++. +.+.+++|++||...+...+
T Consensus 67 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~ 136 (328)
T TIGR03466 67 ALFHVAADYRL------WAPDPEEMYAANVEGTRNLLRAAL----EAGVERVVYTSSVATLGVRGDGTPADETTPSSLDD 136 (328)
T ss_pred EEEEeceeccc------CCCCHHHHHHHHHHHHHHHHHHHH----HhCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence 99999985321 112356788899999999998873 34467999999976543211
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
....|+.+|.+.+.+.+.+..+ .|+++..+.|+.+..+.
T Consensus 137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~ 175 (328)
T TIGR03466 137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPR 175 (328)
T ss_pred ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCC
Confidence 1357999999999999988765 37999999999887654
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.7e-17 Score=133.77 Aligned_cols=167 Identities=16% Similarity=0.100 Sum_probs=120.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++ |++|++++|+.++......... ....++.++.+|++|.+.+.+++. .
T Consensus 15 ~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~--------~ 86 (386)
T PLN02427 15 LTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK--------M 86 (386)
T ss_pred cEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh--------c
Confidence 57999999999999999999998 5899999987655433221100 012358899999999888776654 3
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC---------C----
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---------P---- 145 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------~---- 145 (202)
+|+|||+|+........ ++..+.+..|+.++..+++++ ++.+ .++|++||...+... |
T Consensus 87 ~d~ViHlAa~~~~~~~~----~~~~~~~~~n~~gt~~ll~aa----~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~ 157 (386)
T PLN02427 87 ADLTINLAAICTPADYN----TRPLDTIYSNFIDALPVVKYC----SENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQD 157 (386)
T ss_pred CCEEEEcccccChhhhh----hChHHHHHHHHHHHHHHHHHH----HhcC-CEEEEEeeeeeeCCCcCCCCCcccccccc
Confidence 69999999975322111 122344568999999998876 3333 689999996422110 0
Q ss_pred --------------------CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 146 --------------------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 146 --------------------~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+...|+.+|.+.+.+++.++.. .|+.+..+.|+.+..|.
T Consensus 158 ~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 216 (386)
T PLN02427 158 PAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPR 216 (386)
T ss_pred cccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCC
Confidence 1236999999999999876544 47999999999998775
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.5e-17 Score=129.11 Aligned_cols=166 Identities=19% Similarity=0.147 Sum_probs=125.1
Q ss_pred EEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 4 LVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 4 lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
|||||+|.+|.+++++|+++| ++|.+.++.+...... .+... ....++.+|++|.+++.++++ ..|+
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~~-~~~~~~~~Di~d~~~l~~a~~--------g~d~ 69 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQKS-GVKEYIQGDITDPESLEEALE--------GVDV 69 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhcc-cceeEEEeccccHHHHHHHhc--------CCce
Confidence 699999999999999999999 6888888776432211 11111 123389999999999888876 3699
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC---C--------------
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---I-------------- 144 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---~-------------- 144 (202)
|||.|+...... ....+..+++|+.|+-++++++ ++.+..++|++||.+...+ .
T Consensus 70 V~H~Aa~~~~~~-----~~~~~~~~~vNV~GT~nvl~aa----~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~ 140 (280)
T PF01073_consen 70 VFHTAAPVPPWG-----DYPPEEYYKVNVDGTRNVLEAA----RKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPS 140 (280)
T ss_pred EEEeCccccccC-----cccHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccc
Confidence 999999754322 3346788899999999999988 4456789999999986554 1
Q ss_pred CCChhhhhhHHHHHHHHHHHHH-HHc-cCCcEEEEeeCCcccCCCcc
Q 028868 145 PSVSLYGAYKGAMNQLTKNLAC-EWA-KDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~-e~~-~~gi~v~~v~pG~v~t~~~~ 189 (202)
.....|+.||+..+.+...... ++. ...++.++|.|..|..|...
T Consensus 141 ~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~ 187 (280)
T PF01073_consen 141 SPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQ 187 (280)
T ss_pred cccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccc
Confidence 1344799999999999887665 111 12599999999999877543
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-16 Score=122.57 Aligned_cols=169 Identities=18% Similarity=0.137 Sum_probs=127.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChh--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|++|||||.|+||.+++++++++.- +|+.+++-.- ..+.+ +.+ ....+..+++.|++|.+.+.+++.+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l-~~~-~~~~~~~fv~~DI~D~~~v~~~~~~------ 72 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENL-ADV-EDSPRYRFVQGDICDRELVDRLFKE------ 72 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHH-Hhh-hcCCCceEEeccccCHHHHHHHHHh------
Confidence 6899999999999999999998753 6788876321 12222 222 2245799999999999999888886
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-------------cC
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-------------RG 143 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-------------~~ 143 (202)
..+|+|+|-|+-+.. +.+.+.....+++|+.|++.+++++..+-.+ -+++.+|.---+ .+
T Consensus 73 ~~~D~VvhfAAESHV----DRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp 145 (340)
T COG1088 73 YQPDAVVHFAAESHV----DRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTP 145 (340)
T ss_pred cCCCeEEEechhccc----cccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCC
Confidence 479999999997653 3466677888999999999999998544321 378888874311 23
Q ss_pred CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
..+.++|+||||+.+++.+++.+.+ |+.+....+..-..|-
T Consensus 146 ~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPy 186 (340)
T COG1088 146 YNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPY 186 (340)
T ss_pred CCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCC
Confidence 4477899999999999999999987 5777766665554443
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=121.82 Aligned_cols=163 Identities=27% Similarity=0.317 Sum_probs=129.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
||||||+|.||.+++++|+++|+.|+.+.|+........... ++.++.+|+.|.++++++++.. ++|.|
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~------~~d~v 69 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA------NIDVV 69 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH------TESEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc------CceEE
Confidence 799999999999999999999999988887765443333221 6899999999999999999873 78999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-----------CCChhhh
Q 028868 83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSLYG 151 (202)
Q Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~y~ 151 (202)
||.|+.... ..+.+.....++.|+.++..+++++ .+.+..+++++||...+... .+...|+
T Consensus 70 i~~a~~~~~----~~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~ 141 (236)
T PF01370_consen 70 IHLAAFSSN----PESFEDPEEIIEANVQGTRNLLEAA----REAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG 141 (236)
T ss_dssp EEEBSSSSH----HHHHHSHHHHHHHHHHHHHHHHHHH----HHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred EEeeccccc----ccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence 999996431 1233566788889999998888887 44445799999996433222 1345799
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+|...+.+.+.+..+. ++++..+.|+.+..+.
T Consensus 142 ~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 142 ASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPG 174 (236)
T ss_dssp HHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTT
T ss_pred ccccccccccccccccc---cccccccccccccccc
Confidence 99999999999988775 7999999999998877
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.8e-16 Score=125.73 Aligned_cols=166 Identities=19% Similarity=0.172 Sum_probs=116.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHH---HHHHHHHHhc-------C-CeEEEEEecCCCHHH-H-HH
Q 028868 2 TALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIEL---DARLHEWKNK-------G-FKVTGSVCDLSSREQ-R-EK 66 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~---~~~~~~~~~~-------~-~~v~~~~~Dv~~~~~-i-~~ 66 (202)
+++||||+|+||.+++++|+++| ++|+.+.|+.+.. ++..+.+... . .++.++.+|++++.- + ..
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 6899999976522 2222222211 1 468899999987531 0 11
Q ss_pred HHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC--
Q 028868 67 LIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-- 144 (202)
Q Consensus 67 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-- 144 (202)
....+ . ..+|.+||+|+..... ..++...+.|+.++..+++.+ .+.+..+++++||.......
T Consensus 81 ~~~~~---~-~~~d~vih~a~~~~~~-------~~~~~~~~~nv~g~~~ll~~a----~~~~~~~~v~iSS~~v~~~~~~ 145 (367)
T TIGR01746 81 EWERL---A-ENVDTIVHNGALVNWV-------YPYSELRAANVLGTREVLRLA----ASGRAKPLHYVSTISVLAAIDL 145 (367)
T ss_pred HHHHH---H-hhCCEEEeCCcEeccC-------CcHHHHhhhhhHHHHHHHHHH----hhCCCceEEEEccccccCCcCC
Confidence 11222 1 3689999999965321 124567789999999998876 33445569999998654321
Q ss_pred --------------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 145 --------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 145 --------------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.....|+.+|.+.+.+.+.+.. .|++++.+.||.+.++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~ 197 (367)
T TIGR01746 146 STVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGN 197 (367)
T ss_pred CCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence 1134799999999998876543 3899999999999875
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-15 Score=124.49 Aligned_cols=163 Identities=18% Similarity=0.090 Sum_probs=118.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|.||++++++|.++|++|++++|...... ........++..|+++.+++.+++. .+|
T Consensus 22 ~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~~~~~~~~~~~Dl~d~~~~~~~~~--------~~D 87 (370)
T PLN02695 22 LRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SEDMFCHEFHLVDLRVMENCLKVTK--------GVD 87 (370)
T ss_pred CEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------ccccccceEEECCCCCHHHHHHHHh--------CCC
Confidence 68999999999999999999999999999998643211 1111124567889999877655543 479
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------------C
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------------G 143 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------------~ 143 (202)
+|||.|+......... .+....+..|+.++.++++++ ++.+..++|++||...+. +
T Consensus 88 ~Vih~Aa~~~~~~~~~---~~~~~~~~~N~~~t~nll~aa----~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p 160 (370)
T PLN02695 88 HVFNLAADMGGMGFIQ---SNHSVIMYNNTMISFNMLEAA----RINGVKRFFYASSACIYPEFKQLETNVSLKESDAWP 160 (370)
T ss_pred EEEEcccccCCccccc---cCchhhHHHHHHHHHHHHHHH----HHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCC
Confidence 9999998643211111 112345668999999998877 444457999999964211 2
Q ss_pred CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
..+...|+.+|.+.+.+++.++.. .|+++..+.|+.+..|.
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~ 201 (370)
T PLN02695 161 AEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPF 201 (370)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCC
Confidence 234568999999999999987665 47999999999998874
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=125.92 Aligned_cols=162 Identities=15% Similarity=0.157 Sum_probs=118.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH--HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA--RLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~--~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
++++||||+|+||++++++|+++|++|++++|+.++... ...++.....++.++.+|++|.+++.++++.. +.+
T Consensus 61 ~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~----~~~ 136 (390)
T PLN02657 61 VTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE----GDP 136 (390)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh----CCC
Confidence 579999999999999999999999999999998765421 11112222345888999999999998888753 137
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|+|||+++..... .. +.+++|+.++..+++++ ++.+.+++|++||..... +...|..+|...+
T Consensus 137 ~D~Vi~~aa~~~~~-----~~----~~~~vn~~~~~~ll~aa----~~~gv~r~V~iSS~~v~~---p~~~~~~sK~~~E 200 (390)
T PLN02657 137 VDVVVSCLASRTGG-----VK----DSWKIDYQATKNSLDAG----REVGAKHFVLLSAICVQK---PLLEFQRAKLKFE 200 (390)
T ss_pred CcEEEECCccCCCC-----Cc----cchhhHHHHHHHHHHHH----HHcCCCEEEEEeeccccC---cchHHHHHHHHHH
Confidence 99999999843211 11 22357888888887776 455567999999986543 3456888998888
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
...+. ...|++...+.|+.+..++
T Consensus 201 ~~l~~-----~~~gl~~tIlRp~~~~~~~ 224 (390)
T PLN02657 201 AELQA-----LDSDFTYSIVRPTAFFKSL 224 (390)
T ss_pred HHHHh-----ccCCCCEEEEccHHHhccc
Confidence 77654 2368999999998876543
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=133.52 Aligned_cols=168 Identities=14% Similarity=0.092 Sum_probs=123.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCEEEEEeCCh--hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+||||||+|+||++++++|+++ |++|+.++|.. +........ ....++.++.+|++|.+.+..++..
T Consensus 7 ~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~------ 78 (668)
T PLN02260 7 KNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT------ 78 (668)
T ss_pred CEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh------
Confidence 68999999999999999999998 67999888752 222221111 1134688899999998877665542
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccC------------
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRG------------ 143 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~------------ 143 (202)
..+|+|||+|+..... ...++....+++|+.++..+++++ ++.+ ..++|++||...+..
T Consensus 79 ~~~D~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~ 150 (668)
T PLN02260 79 EGIDTIMHFAAQTHVD----NSFGNSFEFTKNNIYGTHVLLEAC----KVTGQIRRFIHVSTDEVYGETDEDADVGNHEA 150 (668)
T ss_pred cCCCEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCcEEEEEcchHHhCCCccccccCcccc
Confidence 4699999999975321 122334567789999999999887 3333 569999999643211
Q ss_pred --CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 144 --IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 144 --~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
..+...|+.+|.+.+.+.+.+..++ ++.+..+.|+.|..+.
T Consensus 151 ~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~ 193 (668)
T PLN02260 151 SQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPN 193 (668)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcC
Confidence 1134679999999999999887664 6899999999988664
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-15 Score=123.22 Aligned_cols=162 Identities=17% Similarity=0.123 Sum_probs=116.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCC-CHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS-SREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~-~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|.||++++++|+++ |++|++++|+.+...... . ...+.++.+|+. +.+.+.+++ .+
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~----~-~~~~~~~~~Dl~~~~~~~~~~~--------~~ 68 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV----N-HPRMHFFEGDITINKEWIEYHV--------KK 68 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc----c-CCCeEEEeCCCCCCHHHHHHHH--------cC
Confidence 58999999999999999999986 699999998764432211 1 234888899998 555544433 25
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC--------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-------------- 144 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------- 144 (202)
+|+|||.|+...... ..++.+..+++|+.++.++++++ ++.+ .++|++||...+...
T Consensus 69 ~d~ViH~aa~~~~~~----~~~~p~~~~~~n~~~~~~ll~aa----~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~ 139 (347)
T PRK11908 69 CDVILPLVAIATPAT----YVKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY 139 (347)
T ss_pred CCEEEECcccCChHH----hhcCcHHHHHHHHHHHHHHHHHH----HhcC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence 899999999753221 12234566789999999988877 3333 589999997432210
Q ss_pred ----CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 145 ----PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 145 ----~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+...|+.+|.+.+.+++.++.+ .|+.+..+.|+.+..|.
T Consensus 140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~ 183 (347)
T PRK11908 140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPG 183 (347)
T ss_pred CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCC
Confidence 12236999999999999988765 36888889998887654
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.4e-15 Score=122.03 Aligned_cols=165 Identities=30% Similarity=0.302 Sum_probs=123.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+.+|||||+|.||.+++++|.++|++|+.++|......... ..+.++.+|+++.+.+.+.... .. |
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~~------~~-d 66 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAKG------VP-D 66 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHhc------CC-C
Confidence 46999999999999999999999999999999876554433 3577888999998444444442 12 9
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-----------C--CC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------P--SV 147 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~--~~ 147 (202)
.|||+|+........ .+ +....+..|+.++.++++++ ++.+..++|+.||.+...+. + +.
T Consensus 67 ~vih~aa~~~~~~~~-~~--~~~~~~~~nv~gt~~ll~aa----~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~ 139 (314)
T COG0451 67 AVIHLAAQSSVPDSN-AS--DPAEFLDVNVDGTLNLLEAA----RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPL 139 (314)
T ss_pred EEEEccccCchhhhh-hh--CHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCC
Confidence 999999976432211 11 45568899999999999998 43556789996665533321 1 12
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
..|+.+|...+.+++.+.. ..|+.+..+.|+.+..|...
T Consensus 140 ~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 140 NPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred CHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCC
Confidence 2599999999999998888 45799999999988766543
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.8e-15 Score=120.41 Aligned_cols=160 Identities=16% Similarity=0.171 Sum_probs=110.6
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH--HhCCCcc
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS--IFQGKLN 80 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~--~~~~~id 80 (202)
+|||||+|+||++++++|+++|++++++.|+....... .. ...+|+.|..+.+++++.+.+ .+ +++|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~~---------~~~~~~~d~~~~~~~~~~~~~~~~~-~~~d 70 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-VN---------LVDLDIADYMDKEDFLAQIMAGDDF-GDIE 70 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-Hh---------hhhhhhhhhhhHHHHHHHHhccccc-CCcc
Confidence 79999999999999999999999766655543222111 01 123577776666655554432 12 3799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 149 (202)
+|||+|+..... +.. .+..++.|+.++..+++++ ++.+ .++|++||...+.. ..+...
T Consensus 71 ~Vih~A~~~~~~---~~~---~~~~~~~n~~~t~~ll~~~----~~~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~ 139 (308)
T PRK11150 71 AIFHEGACSSTT---EWD---GKYMMDNNYQYSKELLHYC----LERE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV 139 (308)
T ss_pred EEEECceecCCc---CCC---hHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence 999999864322 112 2346899999999999887 3333 37999999753221 123467
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
|+.+|.+.+.+.+.+..+ .++.+..+.|+.+..+.
T Consensus 140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~ 174 (308)
T PRK11150 140 YGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPR 174 (308)
T ss_pred HHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCC
Confidence 999999999998877655 37889999998887654
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.2e-15 Score=117.19 Aligned_cols=155 Identities=25% Similarity=0.245 Sum_probs=120.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH---HHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL---HEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~---~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
++||||||+|.||+|.+.+|.++|+.|+++|+-.......+ +.+...+..+.+.+.|++|...++++++. -
T Consensus 3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~------~ 76 (343)
T KOG1371|consen 3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE------V 76 (343)
T ss_pred cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh------c
Confidence 57999999999999999999999999999987443322222 22223357899999999999999999987 3
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CCC-
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIP- 145 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~- 145 (202)
++|.|+|-|+....+. +.+........|+.|++.+++.. ++.+...+|+.||..-+- +.-
T Consensus 77 ~fd~V~Hfa~~~~vge----S~~~p~~Y~~nNi~gtlnlLe~~----~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~ 148 (343)
T KOG1371|consen 77 KFDAVMHFAALAAVGE----SMENPLSYYHNNIAGTLNLLEVM----KAHNVKALVFSSSATVYGLPTKVPITEEDPTDQ 148 (343)
T ss_pred CCceEEeehhhhccch----hhhCchhheehhhhhHHHHHHHH----HHcCCceEEEecceeeecCcceeeccCcCCCCC
Confidence 6899999999876554 33444678889999999998876 665577888887764321 111
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWA 169 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~ 169 (202)
+...|+.+|.+++.+.+.+..-+.
T Consensus 149 p~~pyg~tK~~iE~i~~d~~~~~~ 172 (343)
T KOG1371|consen 149 PTNPYGKTKKAIEEIIHDYNKAYG 172 (343)
T ss_pred CCCcchhhhHHHHHHHHhhhcccc
Confidence 567899999999999998887764
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3e-15 Score=119.91 Aligned_cols=146 Identities=18% Similarity=0.162 Sum_probs=106.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|.||++++++|+++| +|+.++|... .+..|++|.+.+.++++. -++|
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~------~~~D 56 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRK------IRPD 56 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHh------cCCC
Confidence 689999999999999999999999 7888887531 234799999988887774 3689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CCCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~~ 149 (202)
+|||+|+...... ..++.+..+.+|+.++..+++++ ++.+ .++|++||..-+. +..+...
T Consensus 57 ~Vih~Aa~~~~~~----~~~~~~~~~~~N~~~~~~l~~aa----~~~g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~ 127 (299)
T PRK09987 57 VIVNAAAHTAVDK----AESEPEFAQLLNATSVEAIAKAA----NEVG-AWVVHYSTDYVFPGTGDIPWQETDATAPLNV 127 (299)
T ss_pred EEEECCccCCcch----hhcCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence 9999999764321 22234566789999999999987 3333 4799999854221 1224567
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
|+.+|.+.+.+++.+..+ ...+.|+++..|
T Consensus 128 Yg~sK~~~E~~~~~~~~~-------~~ilR~~~vyGp 157 (299)
T PRK09987 128 YGETKLAGEKALQEHCAK-------HLIFRTSWVYAG 157 (299)
T ss_pred HHHHHHHHHHHHHHhCCC-------EEEEecceecCC
Confidence 999999999998765332 255555555543
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.1e-15 Score=130.81 Aligned_cols=162 Identities=17% Similarity=0.095 Sum_probs=118.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHH-HHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ-REKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~-i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||.+++++|+++ |++|++++|........ . . ..++.++.+|++|.++ +++++ ..
T Consensus 316 ~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~-~-~~~~~~~~gDl~d~~~~l~~~l--------~~ 382 (660)
T PRK08125 316 TRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---L-G-HPRFHFVEGDISIHSEWIEYHI--------KK 382 (660)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---c-C-CCceEEEeccccCcHHHHHHHh--------cC
Confidence 67999999999999999999986 79999999976433221 1 1 2357888999998554 33333 24
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC---------C-----
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------I----- 144 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------~----- 144 (202)
+|+|||.|+....... .++.+..+++|+.++..+++++. +.+ .++|++||...+.. .
T Consensus 383 ~D~ViHlAa~~~~~~~----~~~~~~~~~~Nv~~t~~ll~a~~----~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~ 453 (660)
T PRK08125 383 CDVVLPLVAIATPIEY----TRNPLRVFELDFEENLKIIRYCV----KYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIV 453 (660)
T ss_pred CCEEEECccccCchhh----ccCHHHHHHhhHHHHHHHHHHHH----hcC-CeEEEEcchhhcCCCCCCCcCcccccccc
Confidence 8999999997543221 12234677899999999999874 333 58999999643211 0
Q ss_pred -C---CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 145 -P---SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 145 -~---~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
| +...|+.||.+.+.+++.++.++ |+++..+.|+.+..|.
T Consensus 454 ~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~ 497 (660)
T PRK08125 454 GPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPR 497 (660)
T ss_pred CCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCC
Confidence 1 22469999999999999887664 6999999999998764
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.2e-15 Score=117.53 Aligned_cols=143 Identities=22% Similarity=0.228 Sum_probs=110.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++||||+|+||.+++++|.++|++|++++|. ..|+.+.+++.++++. .++|+
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~------~~~d~ 53 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRA------IRPDA 53 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHh------CCCCE
Confidence 47999999999999999999999999999885 3799999998888764 36899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChhh
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSLY 150 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~y 150 (202)
|||+++..... ......+..+++|+.++..+++++ ++.+ .++|++||...+.+ ..+...|
T Consensus 54 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y 124 (287)
T TIGR01214 54 VVNTAAYTDVD----GAESDPEKAFAVNALAPQNLARAA----ARHG-ARLVHISTDYVFDGEGKRPYREDDATNPLNVY 124 (287)
T ss_pred EEECCcccccc----ccccCHHHHHHHHHHHHHHHHHHH----HHcC-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchh
Confidence 99999965321 122345677889999999999987 3333 48999998643211 1135689
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+.+|...+.+++.+ +.++..+.|+.+..+.
T Consensus 125 ~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~ 154 (287)
T TIGR01214 125 GQSKLAGEQAIRAA-------GPNALIVRTSWLYGGG 154 (287)
T ss_pred hHHHHHHHHHHHHh-------CCCeEEEEeeecccCC
Confidence 99999999888765 4578899999987664
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.1e-14 Score=112.15 Aligned_cols=184 Identities=15% Similarity=0.110 Sum_probs=152.6
Q ss_pred EEEEecC-CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC---
Q 028868 2 TALVTGG-TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG--- 77 (202)
Q Consensus 2 ~~lItGa-s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~--- 77 (202)
+|+|.|. +.-|++.+|.-|-++|+-|++++.+.+..+...++- ..++.....|..+..++...+.+..+.+..
T Consensus 5 vVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~ 81 (299)
T PF08643_consen 5 VVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRPHV 81 (299)
T ss_pred EEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCCCC
Confidence 5788885 799999999999999999999999976655544432 345888888998888877777777765521
Q ss_pred ----------CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc---CCCCeEEEecCCCCccC
Q 028868 78 ----------KLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA---SGNGSIVFISSVGGVRG 143 (202)
Q Consensus 78 ----------~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~iv~vsS~~~~~~ 143 (202)
.+..||..+... ..+|++.++.+.|.+.++.|+.-++.++|.++|+|+. ++...|++.-|+.....
T Consensus 82 p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~ 161 (299)
T PF08643_consen 82 PFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLN 161 (299)
T ss_pred CCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccC
Confidence 477788888765 4678899999999999999999999999999999997 44444555557777888
Q ss_pred CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.|..+.-.....++..|++.|++|+.+.+|.|..+..|.++-..+
T Consensus 162 ~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~~~ 206 (299)
T PF08643_consen 162 PPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIGNF 206 (299)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccccC
Confidence 888999999999999999999999999999999999999986643
|
One of the proteins P32792 from SWISSPROT has been localised to the mitochondria []. |
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.1e-14 Score=122.30 Aligned_cols=160 Identities=17% Similarity=0.099 Sum_probs=113.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+||||||+|.||++++++|+++|++|++++|....... ....+ ...++.++..|+.+.. + ..+
T Consensus 120 ~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~------------l-~~~ 184 (442)
T PLN02206 120 LRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI------------L-LEV 184 (442)
T ss_pred CEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh------------h-cCC
Confidence 679999999999999999999999999998875322211 11111 1235777888887641 1 248
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc----------------C
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------------G 143 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------~ 143 (202)
|.|||.|+....... .++..+.+++|+.++.++++++ ++.+ .++|++||...+. +
T Consensus 185 D~ViHlAa~~~~~~~----~~~p~~~~~~Nv~gt~nLleaa----~~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P 255 (442)
T PLN02206 185 DQIYHLACPASPVHY----KFNPVKTIKTNVVGTLNMLGLA----KRVG-ARFLLTSTSEVYGDPLQHPQVETYWGNVNP 255 (442)
T ss_pred CEEEEeeeecchhhh----hcCHHHHHHHHHHHHHHHHHHH----HHhC-CEEEEECChHHhCCCCCCCCCccccccCCC
Confidence 999999986532211 1234678899999999999987 3333 4899999975332 1
Q ss_pred CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
..+...|+.+|.+.+.+++.+...+ |+.+..+.|+.+..|.
T Consensus 256 ~~~~s~Y~~SK~~aE~~~~~y~~~~---g~~~~ilR~~~vyGp~ 296 (442)
T PLN02206 256 IGVRSCYDEGKRTAETLTMDYHRGA---NVEVRIARIFNTYGPR 296 (442)
T ss_pred CCccchHHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCC
Confidence 1124679999999999988775553 6888888888776653
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.64 E-value=6.1e-15 Score=118.03 Aligned_cols=148 Identities=16% Similarity=0.107 Sum_probs=110.7
Q ss_pred EEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEE
Q 028868 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI 83 (202)
Q Consensus 4 lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi 83 (202)
|||||+|.||.+++++|+++|++|+++.+.. .+|+++.+++.++++. .++|+||
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~--------------------~~Dl~~~~~l~~~~~~------~~~d~Vi 54 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK--------------------ELDLTRQADVEAFFAK------EKPTYVI 54 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccc--------------------cCCCCCHHHHHHHHhc------cCCCEEE
Confidence 6999999999999999999999887664321 3799999988887775 3579999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC---------------C-CCC
Q 028868 84 NNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------------I-PSV 147 (202)
Q Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------~-~~~ 147 (202)
|+|+...... ...++.+..++.|+.++..+++++ ++.+..++|++||..-+.+ . |..
T Consensus 55 h~A~~~~~~~---~~~~~~~~~~~~n~~~~~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~ 127 (306)
T PLN02725 55 LAAAKVGGIH---ANMTYPADFIRENLQIQTNVIDAA----YRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN 127 (306)
T ss_pred Eeeeeecccc---hhhhCcHHHHHHHhHHHHHHHHHH----HHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence 9999743111 111223456779999999999887 4444578999999643211 1 112
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
..|+.+|.+.+.+.+.+..++ ++++..+.|+.+..+.
T Consensus 128 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~ 164 (306)
T PLN02725 128 EWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPH 164 (306)
T ss_pred chHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence 359999999999888876654 6999999999998764
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.5e-14 Score=116.16 Aligned_cols=162 Identities=15% Similarity=0.126 Sum_probs=112.9
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+|||||+|.||.+++++|.++|+ .|++++|..... .. .++. ...+..|+.+.+.++.+.+. .+ .++|+
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~-~~~~-----~~~~~~d~~~~~~~~~~~~~---~~-~~~D~ 69 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KF-LNLA-----DLVIADYIDKEDFLDRLEKG---AF-GKIEA 69 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hh-hhhh-----heeeeccCcchhHHHHHHhh---cc-CCCCE
Confidence 68999999999999999999998 788887654321 11 1111 12456788877666555442 23 57999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChhh
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSLY 150 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~y 150 (202)
|||+|+.... ..++.+..+++|+.++..+++++. +.+ .++|++||...+.. ..+...|
T Consensus 70 vvh~A~~~~~------~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y 138 (314)
T TIGR02197 70 IFHQGACSDT------TETDGEYMMENNYQYSKRLLDWCA----EKG-IPFIYASSAATYGDGEAGFREGRELERPLNVY 138 (314)
T ss_pred EEECccccCc------cccchHHHHHHHHHHHHHHHHHHH----HhC-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence 9999996421 223457788999999999998873 333 47999999653321 1145689
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+.+|...+.+++....+. ..++.+..+.|+.+..+.
T Consensus 139 ~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~ 174 (314)
T TIGR02197 139 GYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPR 174 (314)
T ss_pred HHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCC
Confidence 999999999998644332 235788888888776654
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.9e-14 Score=116.16 Aligned_cols=150 Identities=19% Similarity=0.158 Sum_probs=110.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|.||++++++|+++|++|++++|+.++.... .. .++.++.+|++|.+++.++++ .+|
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l----~~--~~v~~v~~Dl~d~~~l~~al~--------g~d 66 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL----KE--WGAELVYGDLSLPETLPPSFK--------GVT 66 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH----hh--cCCEEEECCCCCHHHHHHHHC--------CCC
Confidence 6899999999999999999999999999999987543221 11 247888999999888766654 479
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+|||+++.... +.....++|+.++.++++++ ++.+..++|++||..+.. . +...|..+|...+.+
T Consensus 67 ~Vi~~~~~~~~---------~~~~~~~~~~~~~~~l~~aa----~~~gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~ 131 (317)
T CHL00194 67 AIIDASTSRPS---------DLYNAKQIDWDGKLALIEAA----KAAKIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQK 131 (317)
T ss_pred EEEECCCCCCC---------CccchhhhhHHHHHHHHHHH----HHcCCCEEEEeccccccc-c-CCChHHHHHHHHHHH
Confidence 99998763211 12235567888888888877 555567999999864321 1 235688888887776
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.+ ..|+....+.|+.+..+
T Consensus 132 l~-------~~~l~~tilRp~~~~~~ 150 (317)
T CHL00194 132 LK-------KSGIPYTIFRLAGFFQG 150 (317)
T ss_pred HH-------HcCCCeEEEeecHHhhh
Confidence 54 35788888999866433
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.6e-14 Score=119.89 Aligned_cols=161 Identities=15% Similarity=0.058 Sum_probs=113.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|.||++++++|+++|++|++++|...........+.. ..++.++..|+.+.. + ..+|
T Consensus 121 mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~------------~-~~~D 186 (436)
T PLN02166 121 LRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI------------L-LEVD 186 (436)
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc------------c-cCCC
Confidence 5799999999999999999999999999999853221111111111 235677788886531 1 2589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc----------------CC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------------GI 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------~~ 144 (202)
+|||.|+........ .+....+++|+.++..+++++. +.+ .++|++||...+. +.
T Consensus 187 ~ViHlAa~~~~~~~~----~~p~~~~~~Nv~gT~nLleaa~----~~g-~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~ 257 (436)
T PLN02166 187 QIYHLACPASPVHYK----YNPVKTIKTNVMGTLNMLGLAK----RVG-ARFLLTSTSEVYGDPLEHPQKETYWGNVNPI 257 (436)
T ss_pred EEEECceeccchhhc----cCHHHHHHHHHHHHHHHHHHHH----HhC-CEEEEECcHHHhCCCCCCCCCccccccCCCC
Confidence 999999865322111 2345778899999999998873 333 4899999975321 11
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+...|+.+|.+.+.+++.+.... ++.+..+.|+.+..+.
T Consensus 258 ~p~s~Yg~SK~~aE~~~~~y~~~~---~l~~~ilR~~~vYGp~ 297 (436)
T PLN02166 258 GERSCYDEGKRTAETLAMDYHRGA---GVEVRIARIFNTYGPR 297 (436)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEEccccCCC
Confidence 124569999999999999876653 6888888888877664
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.57 E-value=4e-13 Score=99.83 Aligned_cols=142 Identities=20% Similarity=0.185 Sum_probs=107.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
|+|+||+|.+|+.++++|+++|++|+++.|++++... ..++.++.+|+.|.+++.+++. +.|.+
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~--------~~d~v 64 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK--------GADAV 64 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT--------TSSEE
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh--------hcchh
Confidence 6899999999999999999999999999999987766 4579999999999877766665 57999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC---------hhhhhh
Q 028868 83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV---------SLYGAY 153 (202)
Q Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~---------~~y~as 153 (202)
|+++|.... + ...++.+...+++.+..++|++|+.......+.. ..|...
T Consensus 65 i~~~~~~~~--------~-------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (183)
T PF13460_consen 65 IHAAGPPPK--------D-------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD 123 (183)
T ss_dssp EECCHSTTT--------H-------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred hhhhhhhcc--------c-------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence 999975332 1 3344455555566677899999998766544431 245555
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
|...+.+. ...+++...+.||++..+..
T Consensus 124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~ 151 (183)
T PF13460_consen 124 KREAEEAL-------RESGLNWTIVRPGWIYGNPS 151 (183)
T ss_dssp HHHHHHHH-------HHSTSEEEEEEESEEEBTTS
T ss_pred HHHHHHHH-------HhcCCCEEEEECcEeEeCCC
Confidence 55544433 24589999999999987753
|
... |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.8e-13 Score=120.48 Aligned_cols=163 Identities=23% Similarity=0.176 Sum_probs=114.1
Q ss_pred CEEEEecCCCchHHHHHHHHH--HCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHH--HHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELA--RFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQR--EKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~--~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i--~~~~~~~~~~~ 75 (202)
|++|||||+|.||++++++|+ ++|++|++++|+.... .........+ .++.++..|++|.+.. ...++.+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l---- 75 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS-RLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL---- 75 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHH-HHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----
Confidence 689999999999999999999 5899999999965321 1111111111 4688899999985320 1112222
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC------------
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG------------ 143 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------------ 143 (202)
..+|+|||+|+..... .+ .....++|+.++..+++++ .+.+..++|++||......
T Consensus 76 -~~~D~Vih~Aa~~~~~----~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~ 143 (657)
T PRK07201 76 -GDIDHVVHLAAIYDLT----AD---EEAQRAANVDGTRNVVELA----ERLQAATFHHVSSIAVAGDYEGVFREDDFDE 143 (657)
T ss_pred -cCCCEEEECceeecCC----CC---HHHHHHHHhHHHHHHHHHH----HhcCCCeEEEEeccccccCccCccccccchh
Confidence 3689999999965321 12 2456689999999988876 4444679999999754321
Q ss_pred -CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 144 -IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 144 -~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
......|+.+|...+.+.+. ..|+++..+.|+.+..+
T Consensus 144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~ 181 (657)
T PRK07201 144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGD 181 (657)
T ss_pred hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeec
Confidence 11235699999999988763 24799999999999754
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.1e-13 Score=118.84 Aligned_cols=132 Identities=18% Similarity=0.178 Sum_probs=103.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+.... . ..++.++.+|++|.+++.++++ .+|
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~---~~~v~~v~gDL~D~~~l~~al~--------~vD 63 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W---PSSADFIAADIRDATAVESAMT--------GAD 63 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c---ccCceEEEeeCCCHHHHHHHHh--------CCC
Confidence 6899999999999999999999999999999975321 1 1247788999999988877665 379
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+|||+|+.... .+++|+.++.++++++ ++.+.+++|++||.. |.+.+.+
T Consensus 64 ~VVHlAa~~~~-------------~~~vNv~GT~nLLeAa----~~~gvkr~V~iSS~~--------------K~aaE~l 112 (854)
T PRK05865 64 VVAHCAWVRGR-------------NDHINIDGTANVLKAM----AETGTGRIVFTSSGH--------------QPRVEQM 112 (854)
T ss_pred EEEECCCcccc-------------hHHHHHHHHHHHHHHH----HHcCCCeEEEECCcH--------------HHHHHHH
Confidence 99999985321 3568999998877765 555567999999853 7777766
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+ ..|+.+..+.|+++..+.
T Consensus 113 l~-------~~gl~~vILRp~~VYGP~ 132 (854)
T PRK05865 113 LA-------DCGLEWVAVRCALIFGRN 132 (854)
T ss_pred HH-------HcCCCEEEEEeceEeCCC
Confidence 53 247999999999988764
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=104.92 Aligned_cols=130 Identities=20% Similarity=0.120 Sum_probs=88.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|.||++++++|+++|++|+... .|+.+.+.+...+.. .++|
T Consensus 10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~------~~~D 59 (298)
T PLN02778 10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDA------VKPT 59 (298)
T ss_pred CeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHh------cCCC
Confidence 6799999999999999999999999987432 234455544444442 2689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC--Cc--------------c--
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG--GV--------------R-- 142 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~--~~--------------~-- 142 (202)
+|||+|+...... .+...++....+++|+.++..+++++. +.+..+ +++||.. +. .
T Consensus 60 ~ViH~Aa~~~~~~-~~~~~~~p~~~~~~Nv~gt~~ll~aa~----~~gv~~-v~~sS~~vy~~~~~~p~~~~~~~~Ee~~ 133 (298)
T PLN02778 60 HVFNAAGVTGRPN-VDWCESHKVETIRANVVGTLTLADVCR----ERGLVL-TNYATGCIFEYDDAHPLGSGIGFKEEDT 133 (298)
T ss_pred EEEECCcccCCCC-chhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCE-EEEecceEeCCCCCCCcccCCCCCcCCC
Confidence 9999999764211 112234557788999999999999883 333334 4444422 11 0
Q ss_pred CCCCChhhhhhHHHHHHHHHHHHH
Q 028868 143 GIPSVSLYGAYKGAMNQLTKNLAC 166 (202)
Q Consensus 143 ~~~~~~~y~asK~a~~~~~~~la~ 166 (202)
+.+....|+.+|.+.+.+++.++.
T Consensus 134 p~~~~s~Yg~sK~~~E~~~~~y~~ 157 (298)
T PLN02778 134 PNFTGSFYSKTKAMVEELLKNYEN 157 (298)
T ss_pred CCCCCCchHHHHHHHHHHHHHhhc
Confidence 111236799999999999988653
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.9e-12 Score=109.06 Aligned_cols=167 Identities=20% Similarity=0.166 Sum_probs=114.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---EEEEEeCChhH---HHHHHHHH---------Hh-c--------CCeEEEEEe
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIE---LDARLHEW---------KN-K--------GFKVTGSVC 56 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~---~Vi~~~r~~~~---~~~~~~~~---------~~-~--------~~~v~~~~~ 56 (202)
|+++||||||+||.+++.+|++.+. +|+++.|.... .+....++ .+ . ..++.++..
T Consensus 12 k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~G 91 (491)
T PLN02996 12 KTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPG 91 (491)
T ss_pred CeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEec
Confidence 6899999999999999999998642 67888885421 11111111 00 0 146899999
Q ss_pred cCCCH-------HHHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC
Q 028868 57 DLSSR-------EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN 129 (202)
Q Consensus 57 Dv~~~-------~~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 129 (202)
|++++ +.++.+++ .+|+|||+|+..... +..+..+++|+.|+..+++.+... .+.
T Consensus 92 Dl~~~~LGLs~~~~~~~l~~--------~vD~ViH~AA~v~~~-------~~~~~~~~~Nv~gt~~ll~~a~~~---~~~ 153 (491)
T PLN02996 92 DISYDDLGVKDSNLREEMWK--------EIDIVVNLAATTNFD-------ERYDVALGINTLGALNVLNFAKKC---VKV 153 (491)
T ss_pred ccCCcCCCCChHHHHHHHHh--------CCCEEEECccccCCc-------CCHHHHHHHHHHHHHHHHHHHHhc---CCC
Confidence 99843 33333332 489999999975421 235678899999999999887331 134
Q ss_pred CeEEEecCCCCccCC---------C-----------------------------------------------------CC
Q 028868 130 GSIVFISSVGGVRGI---------P-----------------------------------------------------SV 147 (202)
Q Consensus 130 ~~iv~vsS~~~~~~~---------~-----------------------------------------------------~~ 147 (202)
.++|++||...+... + ..
T Consensus 154 k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 233 (491)
T PLN02996 154 KMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWP 233 (491)
T ss_pred CeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCC
Confidence 589999986533110 0 11
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
..|+.||+..+.+++..+ .|+.+..+.|+.|..+...+
T Consensus 234 n~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p 271 (491)
T PLN02996 234 NTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEP 271 (491)
T ss_pred CchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCC
Confidence 359999999999997542 37999999999998876544
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.2e-12 Score=102.23 Aligned_cols=163 Identities=19% Similarity=0.169 Sum_probs=98.1
Q ss_pred EecCCCchHHHHHHHHHHCCC--EEEEEeCChhH---HHHHHHHHH----------hcCCeEEEEEecCCCHHH--HHHH
Q 028868 5 VTGGTRGIGHATVEELARFGA--IVHTCSRNQIE---LDARLHEWK----------NKGFKVTGSVCDLSSREQ--REKL 67 (202)
Q Consensus 5 ItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~---~~~~~~~~~----------~~~~~v~~~~~Dv~~~~~--i~~~ 67 (202)
||||||++|.++..+|++++. +|+.+.|..+. .+...+.+. ....++.++..|++++.= -.+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999986 89999997532 222222221 125689999999999541 1122
Q ss_pred HHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc--cC--
Q 028868 68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV--RG-- 143 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~--~~-- 143 (202)
.+++. ..+|+|||+|+...... ..++..+.|+.|+..+++.+ ...+..+++++||.... ..
T Consensus 81 ~~~L~----~~v~~IiH~Aa~v~~~~-------~~~~~~~~NV~gt~~ll~la----~~~~~~~~~~iSTa~v~~~~~~~ 145 (249)
T PF07993_consen 81 YQELA----EEVDVIIHCAASVNFNA-------PYSELRAVNVDGTRNLLRLA----AQGKRKRFHYISTAYVAGSRPGT 145 (249)
T ss_dssp HHHHH----HH--EEEE--SS-SBS--------S--EEHHHHHHHHHHHHHHH----TSSS---EEEEEEGGGTTS-TTT
T ss_pred hhccc----cccceeeecchhhhhcc-------cchhhhhhHHHHHHHHHHHH----HhccCcceEEeccccccCCCCCc
Confidence 33332 24799999999653321 23346779999999999987 33334499999993211 11
Q ss_pred ----------------CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 144 ----------------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 144 ----------------~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
......|..||...|.+.+..+.+ .|+.+..+.||.|-.
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 146 IEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVG 200 (249)
T ss_dssp --SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-
T ss_pred ccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCcccc
Confidence 012347999999999999988766 378999999999866
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.45 E-value=4.1e-13 Score=106.94 Aligned_cols=143 Identities=23% Similarity=0.249 Sum_probs=101.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++||||++|.||.++.++|.++|++|+.+.|. .+|++|.+++.+++... ++|
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~------~pd 53 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF------KPD 53 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH--------S
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh------CCC
Confidence 689999999999999999999999999999877 58999999988888763 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc---C--------CCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR---G--------IPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~---~--------~~~~~~ 149 (202)
+|||+|+...... -.++.+..+.+|+.++..+++.+ .+. +.++|++||..-+. . ..+...
T Consensus 54 ~Vin~aa~~~~~~----ce~~p~~a~~iN~~~~~~la~~~----~~~-~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~ 124 (286)
T PF04321_consen 54 VVINCAAYTNVDA----CEKNPEEAYAINVDATKNLAEAC----KER-GARLIHISTDYVFDGDKGGPYTEDDPPNPLNV 124 (286)
T ss_dssp EEEE------HHH----HHHSHHHHHHHHTHHHHHHHHHH----HHC-T-EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred eEeccceeecHHh----hhhChhhhHHHhhHHHHHHHHHH----HHc-CCcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence 9999999864322 23445678889999999999987 433 56999999964221 1 224678
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
|+.+|...+...+... -+...+.++++..+
T Consensus 125 YG~~K~~~E~~v~~~~-------~~~~IlR~~~~~g~ 154 (286)
T PF04321_consen 125 YGRSKLEGEQAVRAAC-------PNALILRTSWVYGP 154 (286)
T ss_dssp HHHHHHHHHHHHHHH--------SSEEEEEE-SEESS
T ss_pred HHHHHHHHHHHHHHhc-------CCEEEEecceeccc
Confidence 9999999999888621 15566667776655
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.6e-12 Score=99.13 Aligned_cols=128 Identities=20% Similarity=0.225 Sum_probs=103.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|.+||||++|.+|.++++.|. .++.|+.++|.+ +|++|.+.+.+++.+ .++|
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~------~~PD 52 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRE------TRPD 52 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHh------hCCC
Confidence 458999999999999999999 668999998875 799999999999987 4799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC---ccC--------CCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG---VRG--------IPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~---~~~--------~~~~~~ 149 (202)
+|||+|++......+ .+-+..+.+|..++.++++++ ++- +..+|++|+-.- ..+ ..+...
T Consensus 53 vVIn~AAyt~vD~aE----~~~e~A~~vNa~~~~~lA~aa----~~~-ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nv 123 (281)
T COG1091 53 VVINAAAYTAVDKAE----SEPELAFAVNATGAENLARAA----AEV-GARLVHISTDYVFDGEKGGPYKETDTPNPLNV 123 (281)
T ss_pred EEEECcccccccccc----CCHHHHHHhHHHHHHHHHHHH----HHh-CCeEEEeecceEecCCCCCCCCCCCCCCChhh
Confidence 999999987554333 335677889999999999987 332 568999998653 221 235678
Q ss_pred hhhhHHHHHHHHHHHH
Q 028868 150 YGAYKGAMNQLTKNLA 165 (202)
Q Consensus 150 y~asK~a~~~~~~~la 165 (202)
|+.||.+.+...+...
T Consensus 124 YG~sKl~GE~~v~~~~ 139 (281)
T COG1091 124 YGRSKLAGEEAVRAAG 139 (281)
T ss_pred hhHHHHHHHHHHHHhC
Confidence 9999999999988653
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=2.1e-11 Score=86.92 Aligned_cols=181 Identities=21% Similarity=0.171 Sum_probs=130.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
.+++|.|+-|.+|.++...|-.++|-|.-++-.+..-. .....+..|-+=.++-+.+.++..+.++ .++
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~A----------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekv 73 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA----------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKV 73 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc----------cceEEecCCcchhHHHHHHHHHHHHhhccccc
Confidence 36899999999999999999999999988776542111 1122333344434555666777766553 479
Q ss_pred cEEEEcCCCCCCCCCCC-CCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|.|++.||.+.-+.-.. .-..+.+.+..-.+....+..+.+..+++. +|.+-..+.-++..+.|++..|+.+|+++.
T Consensus 74 Dav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~--GGLL~LtGAkaAl~gTPgMIGYGMAKaAVH 151 (236)
T KOG4022|consen 74 DAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKP--GGLLQLTGAKAALGGTPGMIGYGMAKAAVH 151 (236)
T ss_pred ceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCC--CceeeecccccccCCCCcccchhHHHHHHH
Confidence 99999999764322111 112234455556666666666666666664 577777777888999999999999999999
Q ss_pred HHHHHHHHHHc--cCCcEEEEeeCCcccCCCccchhh
Q 028868 159 QLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 159 ~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+++++|+.+-. +.|-...+|-|-..+|||.+.-.+
T Consensus 152 qLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP 188 (236)
T KOG4022|consen 152 QLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMP 188 (236)
T ss_pred HHHHHhcccccCCCCCceeEEEeeeeccCccccccCC
Confidence 99999999864 457889999999999999986544
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.3e-12 Score=103.25 Aligned_cols=171 Identities=19% Similarity=0.203 Sum_probs=124.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
.+++||||+|.+|++++++|++++ .++.+.+..+.......++.......+.++++|+.+..++.+++. +
T Consensus 5 ~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------~- 76 (361)
T KOG1430|consen 5 LSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------G- 76 (361)
T ss_pred CEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------C-
Confidence 479999999999999999999998 689999987753222222222235679999999999888777766 3
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc------------CCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIPS 146 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~~ 146 (202)
. .|+|+|...... ....+-+..+++|+.|+..++.++ .+.+..++|++||..-.. +.|.
T Consensus 77 ~-~Vvh~aa~~~~~----~~~~~~~~~~~vNV~gT~nvi~~c----~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~ 147 (361)
T KOG1430|consen 77 A-VVVHCAASPVPD----FVENDRDLAMRVNVNGTLNVIEAC----KELGVKRLIYTSSAYVVFGGEPIINGDESLPYPL 147 (361)
T ss_pred c-eEEEeccccCcc----ccccchhhheeecchhHHHHHHHH----HHhCCCEEEEecCceEEeCCeecccCCCCCCCcc
Confidence 3 566666543221 222356788889999999998887 666778999999976332 2332
Q ss_pred --ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 147 --VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 147 --~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
...|+.||+-.+.+.+..+. ..+....++.|-.|..|-.+..
T Consensus 148 ~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~ 191 (361)
T KOG1430|consen 148 KHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRL 191 (361)
T ss_pred ccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccc
Confidence 25899999988888886654 3468889999988887765543
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=2.5e-11 Score=97.51 Aligned_cols=166 Identities=20% Similarity=0.207 Sum_probs=116.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChh---HHHHHHHHHH-------hcCCeEEEEEecCCCHHH--HHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQI---ELDARLHEWK-------NKGFKVTGSVCDLSSREQ--REKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~---~~~~~~~~~~-------~~~~~v~~~~~Dv~~~~~--i~~~ 67 (202)
|++++|||||++|..+..+|+.+- .+|+-..|..+ ..+++.+.+. ....++.++..|++.++- -+.-
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 689999999999999999999765 48998887433 2333333332 225689999999995321 1111
Q ss_pred HHHHHHHhCCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC--
Q 028868 68 IETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-- 144 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-- 144 (202)
...+. ..+|.+|||++... ..| ..+....|+.|+..+++.+ ...+...+.++||++.....
T Consensus 81 ~~~La----~~vD~I~H~gA~Vn~v~p--------Ys~L~~~NVlGT~evlrLa----~~gk~Kp~~yVSsisv~~~~~~ 144 (382)
T COG3320 81 WQELA----ENVDLIIHNAALVNHVFP--------YSELRGANVLGTAEVLRLA----ATGKPKPLHYVSSISVGETEYY 144 (382)
T ss_pred HHHHh----hhcceEEecchhhcccCc--------HHHhcCcchHhHHHHHHHH----hcCCCceeEEEeeeeecccccc
Confidence 22221 46899999999653 333 3455678999999998876 44445669999998743221
Q ss_pred ------------------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 145 ------------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 145 ------------------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.....|+-||-+.+.+.+.. +..|+++..+.||+|-.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A----~~rGLpv~I~Rpg~I~gd 200 (382)
T COG3320 145 SNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREA----GDRGLPVTIFRPGYITGD 200 (382)
T ss_pred CCCccccccccccccccCccCCCcchhHHHHHHHHHHH----hhcCCCeEEEecCeeecc
Confidence 12367999999999988844 445899999999999544
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.5e-12 Score=97.89 Aligned_cols=169 Identities=20% Similarity=0.163 Sum_probs=124.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH--HHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR-LH--EWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~-~~--~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|++||||-+|.=|.-+|+.|+++|+.|..+.|.....+.. .+ ++... ..+++.+..|++|..++.++++++
T Consensus 3 K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----- 77 (345)
T COG1089 3 KVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----- 77 (345)
T ss_pred ceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc-----
Confidence 7899999999999999999999999999988864432222 11 11122 346889999999999999999874
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC--C---------ccCCC
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG--G---------VRGIP 145 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~--~---------~~~~~ 145 (202)
.+|-++|-++++... .+.+..+.+.+++..|+++++.+.- .+. .+.-++..-||+- | .-|+.
T Consensus 78 -~PdEIYNLaAQS~V~----vSFe~P~~T~~~~~iGtlrlLEaiR-~~~-~~~~rfYQAStSE~fG~v~~~pq~E~TPFy 150 (345)
T COG1089 78 -QPDEIYNLAAQSHVG----VSFEQPEYTADVDAIGTLRLLEAIR-ILG-EKKTRFYQASTSELYGLVQEIPQKETTPFY 150 (345)
T ss_pred -Cchhheecccccccc----ccccCcceeeeechhHHHHHHHHHH-HhC-CcccEEEecccHHhhcCcccCccccCCCCC
Confidence 689999999987654 4556667888899999999998862 221 1134555555532 1 12466
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHc---cCCcEEEEeeCC
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWA---KDNIRTNTVAPW 181 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~---~~gi~v~~v~pG 181 (202)
+.++|+++|....-++...+..|+ -.||-+|-=+|.
T Consensus 151 PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~ 189 (345)
T COG1089 151 PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPL 189 (345)
T ss_pred CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCC
Confidence 889999999999999988888763 345666655544
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.1e-11 Score=104.36 Aligned_cols=141 Identities=16% Similarity=0.096 Sum_probs=98.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|.||++++++|.++|++|... ..|++|.+.+.+.+.. -++|
T Consensus 381 mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~------------------------~~~l~d~~~v~~~i~~------~~pd 430 (668)
T PLN02260 381 LKFLIYGRTGWIGGLLGKLCEKQGIAYEYG------------------------KGRLEDRSSLLADIRN------VKPT 430 (668)
T ss_pred ceEEEECCCchHHHHHHHHHHhCCCeEEee------------------------ccccccHHHHHHHHHh------hCCC
Confidence 579999999999999999999999887311 1367777777666654 2689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc------------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------------ 142 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------------ 142 (202)
+|||+|+..... -.+...++.+..+++|+.++..+++++ ++.+. +++++||...+.
T Consensus 431 ~Vih~Aa~~~~~-~~~~~~~~~~~~~~~N~~gt~~l~~a~----~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~ 504 (668)
T PLN02260 431 HVFNAAGVTGRP-NVDWCESHKVETIRANVVGTLTLADVC----RENGL-LMMNFATGCIFEYDAKHPEGSGIGFKEEDK 504 (668)
T ss_pred EEEECCcccCCC-CCChHHhCHHHHHHHHhHHHHHHHHHH----HHcCC-eEEEEcccceecCCcccccccCCCCCcCCC
Confidence 999999975321 122334556788899999999999998 33333 455665532110
Q ss_pred CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeC
Q 028868 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180 (202)
Q Consensus 143 ~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~p 180 (202)
+.+....|+.||.+.+.+++.+... ..+|+..+..
T Consensus 505 ~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~~ 539 (668)
T PLN02260 505 PNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPIS 539 (668)
T ss_pred CCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEecc
Confidence 1122368999999999999876422 3567776664
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.6e-10 Score=108.10 Aligned_cols=167 Identities=17% Similarity=0.197 Sum_probs=113.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC----CEEEEEeCChhHH---HHHHHHHHhc-------CCeEEEEEecCCCHHH--H
Q 028868 1 MTALVTGGTRGIGHATVEELARFG----AIVHTCSRNQIEL---DARLHEWKNK-------GFKVTGSVCDLSSREQ--R 64 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g----~~Vi~~~r~~~~~---~~~~~~~~~~-------~~~v~~~~~Dv~~~~~--i 64 (202)
++++||||+|.+|.+++++|++++ ++|+.+.|+.... +...+.+... ..++.++..|++++.- -
T Consensus 972 ~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~ 1051 (1389)
T TIGR03443 972 ITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLS 1051 (1389)
T ss_pred ceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcC
Confidence 579999999999999999999987 6888888875332 2222222111 1368889999986421 0
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-
Q 028868 65 EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG- 143 (202)
Q Consensus 65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~- 143 (202)
....+++. ..+|++||+|+.... ..+ +......|+.|+..+++.+ .+.+..+++++||.+.+..
T Consensus 1052 ~~~~~~l~----~~~d~iiH~Aa~~~~----~~~---~~~~~~~nv~gt~~ll~~a----~~~~~~~~v~vSS~~v~~~~ 1116 (1389)
T TIGR03443 1052 DEKWSDLT----NEVDVIIHNGALVHW----VYP---YSKLRDANVIGTINVLNLC----AEGKAKQFSFVSSTSALDTE 1116 (1389)
T ss_pred HHHHHHHH----hcCCEEEECCcEecC----ccC---HHHHHHhHHHHHHHHHHHH----HhCCCceEEEEeCeeecCcc
Confidence 11222221 368999999996531 122 3344567999999999877 3344568999999754311
Q ss_pred ----------------C-----------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 144 ----------------I-----------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 144 ----------------~-----------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
. .....|+.||.+.+.+++..+. .|+.+..+.||.|..+
T Consensus 1117 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~ 1182 (1389)
T TIGR03443 1117 YYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGD 1182 (1389)
T ss_pred cccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccC
Confidence 0 0124599999999998876532 4899999999999765
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=7.1e-11 Score=87.45 Aligned_cols=85 Identities=21% Similarity=0.206 Sum_probs=72.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+ |+|.+++++|+++|++|++.+|++++.+.....+.. ...+.++.+|++|++++.++++.+.+.+ +++|
T Consensus 1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~-g~id 77 (177)
T PRK08309 1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKN-GPFD 77 (177)
T ss_pred CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCe
Confidence 689999998 677789999999999999999998877666655543 4468889999999999999999998887 6899
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
.+|+.+..
T Consensus 78 ~lv~~vh~ 85 (177)
T PRK08309 78 LAVAWIHS 85 (177)
T ss_pred EEEEeccc
Confidence 99987764
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.28 E-value=4.3e-10 Score=97.35 Aligned_cols=121 Identities=16% Similarity=0.157 Sum_probs=83.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---EEEEEeCChhH--H-HHHHHHH---------Hhc---------CCeEEEEEe
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIE--L-DARLHEW---------KNK---------GFKVTGSVC 56 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~---~Vi~~~r~~~~--~-~~~~~~~---------~~~---------~~~v~~~~~ 56 (202)
|+++||||+|+||..++++|++.+. +|+++.|..+. . +...+++ .+. ..++.++..
T Consensus 120 k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~G 199 (605)
T PLN02503 120 KNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVG 199 (605)
T ss_pred CEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEe
Confidence 6899999999999999999998653 67888885321 1 1211121 111 236889999
Q ss_pred cCCCHH------HHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCC
Q 028868 57 DLSSRE------QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNG 130 (202)
Q Consensus 57 Dv~~~~------~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 130 (202)
|+++++ ..+.+. ..+|+|||+|+..... +..+..+++|+.|+..+++.+... ....
T Consensus 200 Dl~d~~LGLs~~~~~~L~--------~~vDiVIH~AA~v~f~-------~~~~~a~~vNV~GT~nLLelA~~~---~~lk 261 (605)
T PLN02503 200 NVCESNLGLEPDLADEIA--------KEVDVIINSAANTTFD-------ERYDVAIDINTRGPCHLMSFAKKC---KKLK 261 (605)
T ss_pred eCCCcccCCCHHHHHHHH--------hcCCEEEECccccccc-------cCHHHHHHHHHHHHHHHHHHHHHc---CCCC
Confidence 999862 222222 2489999999975421 346678889999999999887332 1235
Q ss_pred eEEEecCCC
Q 028868 131 SIVFISSVG 139 (202)
Q Consensus 131 ~iv~vsS~~ 139 (202)
++|++||..
T Consensus 262 ~fV~vSTay 270 (605)
T PLN02503 262 LFLQVSTAY 270 (605)
T ss_pred eEEEccCce
Confidence 788888864
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.27 E-value=1.1e-10 Score=92.77 Aligned_cols=155 Identities=15% Similarity=0.089 Sum_probs=93.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
+|||||+|.||.+++++|+++|++|++++|+++...... . .. ..|+.. . ...+.+ ..+|+|
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~----~~--~~~~~~-~-------~~~~~~-~~~D~V 61 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK----W----EG--YKPWAP-L-------AESEAL-EGADAV 61 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc----c----ee--eecccc-c-------chhhhc-CCCCEE
Confidence 689999999999999999999999999999876543211 0 00 112221 1 111223 469999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC--CeEEEecCCCCccC-----------CCCChh
Q 028868 83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN--GSIVFISSVGGVRG-----------IPSVSL 149 (202)
Q Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~vsS~~~~~~-----------~~~~~~ 149 (202)
||+||..... ...+.+.....++.|+.++..+++++ ++.+. ..+++.|+...+.. ..+...
T Consensus 62 vh~a~~~~~~--~~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~ 135 (292)
T TIGR01777 62 INLAGEPIAD--KRWTEERKQEIRDSRIDTTRALVEAI----AAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDF 135 (292)
T ss_pred EECCCCCccc--ccCCHHHHHHHHhcccHHHHHHHHHH----HhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCCh
Confidence 9999964321 12344566778889999999888887 43332 23444444221110 001112
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
|+..+...+...+ .+...++.+..+.|+.+..+
T Consensus 136 ~~~~~~~~e~~~~----~~~~~~~~~~ilR~~~v~G~ 168 (292)
T TIGR01777 136 LAELCRDWEEAAQ----AAEDLGTRVVLLRTGIVLGP 168 (292)
T ss_pred HHHHHHHHHHHhh----hchhcCCceEEEeeeeEECC
Confidence 3333333333322 22345799999999999776
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.4e-10 Score=92.08 Aligned_cols=142 Identities=13% Similarity=0.070 Sum_probs=94.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++||||||.+|++++++|+++|++|.++.|++++... .++..+.+|+.|.+++.++++.... +.+.+|.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~---------~~~~~~~~d~~d~~~l~~a~~~~~~-~~g~~d~ 70 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG---------PNEKHVKFDWLDEDTWDNPFSSDDG-MEPEISA 70 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC---------CCCccccccCCCHHHHHHHHhcccC-cCCceeE
Confidence 48999999999999999999999999999999865321 1355667899999999988864322 2123899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHHH
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~ 161 (202)
++++++... +..+ ..+.+++.+++.+..+||++||.....+.+ .+..++.+.
T Consensus 71 v~~~~~~~~---------~~~~------------~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~~-------~~~~~~~~l 122 (285)
T TIGR03649 71 VYLVAPPIP---------DLAP------------PMIKFIDFARSKGVRRFVLLSASIIEKGGP-------AMGQVHAHL 122 (285)
T ss_pred EEEeCCCCC---------ChhH------------HHHHHHHHHHHcCCCEEEEeeccccCCCCc-------hHHHHHHHH
Confidence 999876321 0111 111233334556678999999865433211 222222222
Q ss_pred HHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 162 KNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 162 ~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+. ..|+....+.|+++..++
T Consensus 123 ~~------~~gi~~tilRp~~f~~~~ 142 (285)
T TIGR03649 123 DS------LGGVEYTVLRPTWFMENF 142 (285)
T ss_pred Hh------ccCCCEEEEeccHHhhhh
Confidence 21 138999999999887654
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.23 E-value=8e-11 Score=91.00 Aligned_cols=173 Identities=16% Similarity=0.077 Sum_probs=123.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhH-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|.++|||+.|.||..+...+... .++.+..+.-.-- ....+++.. -..+..+++.|+.+...+.-++.. .
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~-n~p~ykfv~~di~~~~~~~~~~~~------~ 79 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVR-NSPNYKFVEGDIADADLVLYLFET------E 79 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhc-cCCCceEeeccccchHHHHhhhcc------C
Confidence 57999999999999999999975 4555555431100 022222222 245788999999998887777765 6
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc------------CCC
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIP 145 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~ 145 (202)
++|.|+|.|...........+ -...+.|++++..+++...-.. +..++|++|+..-+. ...
T Consensus 80 ~id~vihfaa~t~vd~s~~~~----~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s~~n 152 (331)
T KOG0747|consen 80 EIDTVIHFAAQTHVDRSFGDS----FEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEASLLN 152 (331)
T ss_pred chhhhhhhHhhhhhhhhcCch----HHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccccCC
Confidence 899999999976433222222 3455689999999998874433 346899999864221 123
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+..+|+++|+|.+++.+++.+.+ |+.+..+.-+.|..|-..+
T Consensus 153 PtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~ 194 (331)
T KOG0747|consen 153 PTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYP 194 (331)
T ss_pred CCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcCh
Confidence 56789999999999999998886 6888888888888776543
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.8e-11 Score=92.38 Aligned_cols=94 Identities=19% Similarity=0.228 Sum_probs=74.4
Q ss_pred CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCCC
Q 028868 9 TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 9 s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag~ 88 (202)
+||||+++|++|+++|++|+++++.. .+ .... ...+|+++.++++++++.+.+.+ +++|++|||||+
T Consensus 24 SGgIG~AIA~~la~~Ga~Vvlv~~~~-~l-------~~~~----~~~~Dv~d~~s~~~l~~~v~~~~-g~iDiLVnnAgv 90 (227)
T TIGR02114 24 TGHLGKIITETFLSAGHEVTLVTTKR-AL-------KPEP----HPNLSIREIETTKDLLITLKELV-QEHDILIHSMAV 90 (227)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEcChh-hc-------cccc----CCcceeecHHHHHHHHHHHHHHc-CCCCEEEECCEe
Confidence 67999999999999999999987631 11 1101 23589999999999999999988 689999999998
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhHhHHHHHH
Q 028868 89 AFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118 (202)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 118 (202)
....++.+.+.++|+.++. .+.+.+.+
T Consensus 91 ~d~~~~~~~s~e~~~~~~~---~~~~~~~~ 117 (227)
T TIGR02114 91 SDYTPVYMTDLEQVQASDN---LNEFLSKQ 117 (227)
T ss_pred ccccchhhCCHHHHhhhcc---hhhhhccc
Confidence 8778888899999887744 45555554
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.8e-10 Score=93.31 Aligned_cols=144 Identities=17% Similarity=0.162 Sum_probs=94.4
Q ss_pred CEEEEe----cCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH-------HHHHHhcCCeEEEEEecCCCHHHHHHHHH
Q 028868 1 MTALVT----GGTRGIGHATVEELARFGAIVHTCSRNQIELDAR-------LHEWKNKGFKVTGSVCDLSSREQREKLIE 69 (202)
Q Consensus 1 k~~lIt----Gas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~-------~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~ 69 (202)
|++||| ||+|.||.+++++|+++|++|++++|+....... ..++.. ..+.++..|+.| +.+++.
T Consensus 53 ~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d---~~~~~~ 127 (378)
T PLN00016 53 KKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS--AGVKTVWGDPAD---VKSKVA 127 (378)
T ss_pred ceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh--cCceEEEecHHH---HHhhhc
Confidence 579999 9999999999999999999999999987543221 112222 237788888866 333332
Q ss_pred HHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCC---
Q 028868 70 TVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS--- 146 (202)
Q Consensus 70 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--- 146 (202)
...+|+|||+++. .. .+...++++ +++.+..++|++||...+.....
T Consensus 128 ------~~~~d~Vi~~~~~---------~~-----------~~~~~ll~a----a~~~gvkr~V~~SS~~vyg~~~~~p~ 177 (378)
T PLN00016 128 ------GAGFDVVYDNNGK---------DL-----------DEVEPVADW----AKSPGLKQFLFCSSAGVYKKSDEPPH 177 (378)
T ss_pred ------cCCccEEEeCCCC---------CH-----------HHHHHHHHH----HHHcCCCEEEEEccHhhcCCCCCCCC
Confidence 1368999998762 11 122233333 35555679999999754322110
Q ss_pred -----ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 147 -----VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 147 -----~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
...+. +|...+.+.+ ..++.+..+.|+++..+.
T Consensus 178 ~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~ 215 (378)
T PLN00016 178 VEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPG 215 (378)
T ss_pred CCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCC
Confidence 11122 7877776654 247999999999998764
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.7e-09 Score=94.76 Aligned_cols=136 Identities=18% Similarity=0.244 Sum_probs=93.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|.++|++|+.++|.+... ...++.++..|+++.. +.++ + ..+|
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~a-------l-~~~D 62 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQEL-------A-GEAD 62 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHH-------h-cCCC
Confidence 5799999999999999999999999999999875321 1235778999999863 3222 2 3589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
.|||.|+.... . ..++|+.++.++++++ ++.+ .++|++||..+. + ..|. ..+.+
T Consensus 63 ~VIHLAa~~~~------~------~~~vNv~Gt~nLleAA----~~~G-vRiV~~SS~~G~---~--~~~~----~aE~l 116 (699)
T PRK12320 63 AVIHLAPVDTS------A------PGGVGITGLAHVANAA----ARAG-ARLLFVSQAAGR---P--ELYR----QAETL 116 (699)
T ss_pred EEEEcCccCcc------c------hhhHHHHHHHHHHHHH----HHcC-CeEEEEECCCCC---C--cccc----HHHHH
Confidence 99999986321 1 1147899999998887 4443 479999986432 1 1122 12222
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+ ..++.+..+.|+++..+.
T Consensus 117 l~-------~~~~p~~ILR~~nVYGp~ 136 (699)
T PRK12320 117 VS-------TGWAPSLVIRIAPPVGRQ 136 (699)
T ss_pred HH-------hcCCCEEEEeCceecCCC
Confidence 21 134778888888887763
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.00 E-value=3.4e-09 Score=82.17 Aligned_cols=162 Identities=18% Similarity=0.125 Sum_probs=110.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++||||+|+||++++.+|..+|+.|++++.--...+........ ..++..+.-|+..+ ++. .+|
T Consensus 28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~-~~~fel~~hdv~~p-----l~~--------evD 93 (350)
T KOG1429|consen 28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIG-HPNFELIRHDVVEP-----LLK--------EVD 93 (350)
T ss_pred cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhcc-CcceeEEEeechhH-----HHH--------Hhh
Confidence 4799999999999999999999999999999754443333332211 23466677787654 332 357
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc----------------CC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------------GI 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------~~ 144 (202)
.++|-|.-..+..+...+ .+++..|+.+++.++..+ ++ -+.++++.|++.-+- +.
T Consensus 94 ~IyhLAapasp~~y~~np----vktIktN~igtln~lgla----kr-v~aR~l~aSTseVYgdp~~hpq~e~ywg~vnpi 164 (350)
T KOG1429|consen 94 QIYHLAAPASPPHYKYNP----VKTIKTNVIGTLNMLGLA----KR-VGARFLLASTSEVYGDPLVHPQVETYWGNVNPI 164 (350)
T ss_pred hhhhhccCCCCcccccCc----cceeeecchhhHHHHHHH----HH-hCceEEEeecccccCCcccCCCccccccccCcC
Confidence 777877755433333222 466779999999988876 33 246787777754221 12
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+.+.|...|...+.++....++ .||.|-...+..+..|.+
T Consensus 165 gpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 165 GPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRM 205 (350)
T ss_pred CchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCcc
Confidence 25678999999999888877766 467777667666665543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.1e-08 Score=76.47 Aligned_cols=146 Identities=19% Similarity=0.190 Sum_probs=93.6
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
|+|+||+|.+|+.+++.|++.+++|.++.|++. ....+++...+. .++..|..|.+++.++++ .+|.|
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~--~~~~~~l~~~g~--~vv~~d~~~~~~l~~al~--------g~d~v 68 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS--SDRAQQLQALGA--EVVEADYDDPESLVAALK--------GVDAV 68 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH--HHHHHHHHHTTT--EEEES-TT-HHHHHHHHT--------TCSEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc--hhhhhhhhcccc--eEeecccCCHHHHHHHHc--------CCceE
Confidence 689999999999999999999999999999973 233444545444 456999999888877776 57999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC----CChhhhhhHHHHH
Q 028868 83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----SVSLYGAYKGAMN 158 (202)
Q Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----~~~~y~asK~a~~ 158 (202)
+++.+... ... ......+++++ ++.+..++|+ ||........ +...+-..|..++
T Consensus 69 ~~~~~~~~------~~~----------~~~~~~li~Aa----~~agVk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie 127 (233)
T PF05368_consen 69 FSVTPPSH------PSE----------LEQQKNLIDAA----KAAGVKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIE 127 (233)
T ss_dssp EEESSCSC------CCH----------HHHHHHHHHHH----HHHT-SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHH
T ss_pred EeecCcch------hhh----------hhhhhhHHHhh----hccccceEEE-EEecccccccccccccchhhhhhhhhh
Confidence 98888543 011 22223344444 3345678875 5544333211 1223334676666
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+.+. .|+....|.||++..++.
T Consensus 128 ~~l~~-------~~i~~t~i~~g~f~e~~~ 150 (233)
T PF05368_consen 128 EYLRE-------SGIPYTIIRPGFFMENLL 150 (233)
T ss_dssp HHHHH-------CTSEBEEEEE-EEHHHHH
T ss_pred hhhhh-------ccccceeccccchhhhhh
Confidence 55543 389999999998765443
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=7.5e-09 Score=80.12 Aligned_cols=157 Identities=20% Similarity=0.201 Sum_probs=93.7
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
++||||||.||++++.+|.+.|++|.++.|++.+....... .+ ...+. +.+....++|+|
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~------~v-------~~~~~-------~~~~~~~~~Dav 60 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP------NV-------TLWEG-------LADALTLGIDAV 60 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc------cc-------cccch-------hhhcccCCCCEE
Confidence 58999999999999999999999999999998666543321 01 11111 111111369999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC--CCCeEEEecCCCCccCCCCChhhh----hhHHH
Q 028868 83 INNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVGGVRGIPSVSLYG----AYKGA 156 (202)
Q Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~~~~y~----asK~a 156 (202)
||-||-.-.. ..++.+.=+.+++.-+..+-.+. ..+.+. ++..++. +|..|+++......|- ...-.
T Consensus 61 INLAG~~I~~--rrWt~~~K~~i~~SRi~~T~~L~----e~I~~~~~~P~~~is-aSAvGyYG~~~~~~~tE~~~~g~~F 133 (297)
T COG1090 61 INLAGEPIAE--RRWTEKQKEEIRQSRINTTEKLV----ELIAASETKPKVLIS-ASAVGYYGHSGDRVVTEESPPGDDF 133 (297)
T ss_pred EECCCCcccc--ccCCHHHHHHHHHHHhHHHHHHH----HHHHhccCCCcEEEe-cceEEEecCCCceeeecCCCCCCCh
Confidence 9999964211 12566666666666555555444 444533 2333333 3334555433222221 11234
Q ss_pred HHHHHHHHHHHH---ccCCcEEEEeeCCcccCC
Q 028868 157 MNQLTKNLACEW---AKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 157 ~~~~~~~la~e~---~~~gi~v~~v~pG~v~t~ 186 (202)
+..+++.|-.+. ...|.||+.+.-|.|-.+
T Consensus 134 la~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~ 166 (297)
T COG1090 134 LAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSP 166 (297)
T ss_pred HHHHHHHHHHHHhhhhhcCceEEEEEEEEEecC
Confidence 445555555443 345899999999999663
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.9e-09 Score=79.99 Aligned_cols=97 Identities=15% Similarity=0.148 Sum_probs=65.4
Q ss_pred EEecCC-CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 4 LVTGGT-RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 4 lItGas-~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
.||..| |+||+++|++|+++|++|++++|..... . ....++.++.++ +.++..+.+.+.+ +.+|++
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~-----~--~~~~~v~~i~v~-----s~~~m~~~l~~~~-~~~Div 85 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVK-----P--EPHPNLSIIEIE-----NVDDLLETLEPLV-KDHDVL 85 (229)
T ss_pred eecCccchHHHHHHHHHHHhCCCEEEEEECccccc-----C--CCCCCeEEEEEe-----cHHHHHHHHHHHh-cCCCEE
Confidence 344444 4599999999999999999998764210 0 011235555432 3333344444445 578999
Q ss_pred EEcCCCCCCCCCCCCCHHHHHHHHHHHhHhH
Q 028868 83 INNAAIAFVKPTVDITAEDMSTVSSTNFESV 113 (202)
Q Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~ 113 (202)
||+||+....+....+.+++..++++|.+..
T Consensus 86 Ih~AAvsd~~~~~~~~~~~~~~~~~v~~~~~ 116 (229)
T PRK06732 86 IHSMAVSDYTPVYMTDLEEVSASDNLNEFLT 116 (229)
T ss_pred EeCCccCCceehhhhhhhhhhhhhhhhhhhc
Confidence 9999998766766778889999988876643
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.8e-09 Score=93.19 Aligned_cols=162 Identities=22% Similarity=0.326 Sum_probs=130.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHH---HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIEL---DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~---~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++|+||-||.|+++|.+|..+|+ .+++++|+..+. ........+.|..|.+-..|++....-..+++...+.
T Consensus 1769 ksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl-- 1846 (2376)
T KOG1202|consen 1769 KSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKL-- 1846 (2376)
T ss_pred ceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhc--
Confidence 6799999999999999999999999 688888875432 2344455667888888888888888777777776544
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
+++-.++|-|.+-....+++.+.+++.+.-+..+.|+.++=+.-...-. .-..+|.+||...-+++.++..|+-+..+
T Consensus 1847 ~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~--~LdyFv~FSSvscGRGN~GQtNYG~aNS~ 1924 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICP--ELDYFVVFSSVSCGRGNAGQTNYGLANSA 1924 (2376)
T ss_pred ccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCc--ccceEEEEEeecccCCCCcccccchhhHH
Confidence 6899999999988888899999999999999999999986544311111 24678899999999999999999999999
Q ss_pred HHHHHHHHHH
Q 028868 157 MNQLTKNLAC 166 (202)
Q Consensus 157 ~~~~~~~la~ 166 (202)
++.+...=..
T Consensus 1925 MERiceqRr~ 1934 (2376)
T KOG1202|consen 1925 MERICEQRRH 1934 (2376)
T ss_pred HHHHHHHhhh
Confidence 9998875433
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.5e-08 Score=84.29 Aligned_cols=125 Identities=15% Similarity=0.167 Sum_probs=89.0
Q ss_pred EEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEE
Q 028868 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI 83 (202)
Q Consensus 4 lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi 83 (202)
+|+||++|+|.++++.+...|++|+.+.+.+.+... . . ..+++.++
T Consensus 42 ~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~------~---------------------------~-~~~~~~~~ 87 (450)
T PRK08261 42 VLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA------G---------------------------W-GDRFGALV 87 (450)
T ss_pred eEEccCchhHHHHHHHHhhCCCeeeecCcccccccc------C---------------------------c-CCcccEEE
Confidence 388888999999999999999999987766441100 0 0 12455444
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHHHHH
Q 028868 84 NNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN 163 (202)
Q Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~~~ 163 (202)
+-+... .+.++ +.+.+.+++.+++.|.+ .|+||+++|..+.. +...|+++|+++.+++|+
T Consensus 88 ~d~~~~-------~~~~~--------l~~~~~~~~~~l~~l~~--~griv~i~s~~~~~---~~~~~~~akaal~gl~rs 147 (450)
T PRK08261 88 FDATGI-------TDPAD--------LKALYEFFHPVLRSLAP--CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRS 147 (450)
T ss_pred EECCCC-------CCHHH--------HHHHHHHHHHHHHhccC--CCEEEEEccccccC---CchHHHHHHHHHHHHHHH
Confidence 322211 11222 23445677777887754 58999999987653 335699999999999999
Q ss_pred HHHHHccCCcEEEEeeCCcc
Q 028868 164 LACEWAKDNIRTNTVAPWVI 183 (202)
Q Consensus 164 la~e~~~~gi~v~~v~pG~v 183 (202)
++.|+ +.|++++.|.|++.
T Consensus 148 la~E~-~~gi~v~~i~~~~~ 166 (450)
T PRK08261 148 LGKEL-RRGATAQLVYVAPG 166 (450)
T ss_pred HHHHh-hcCCEEEEEecCCC
Confidence 99999 67999999999874
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=4.7e-08 Score=78.02 Aligned_cols=80 Identities=20% Similarity=0.181 Sum_probs=61.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCCh---hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++|+|| ||+|++++..|++.|++ |.+++|+. ++.+.+.+++.+.+..+....+|+++.+++++.++
T Consensus 127 k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~------- 198 (289)
T PRK12548 127 KKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA------- 198 (289)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-------
Confidence 57999999 69999999999999995 99999997 67777777775544455666788877666544333
Q ss_pred CCccEEEEcCCCC
Q 028868 77 GKLNILINNAAIA 89 (202)
Q Consensus 77 ~~id~vi~~ag~~ 89 (202)
..|+|||+....
T Consensus 199 -~~DilINaTp~G 210 (289)
T PRK12548 199 -SSDILVNATLVG 210 (289)
T ss_pred -cCCEEEEeCCCC
Confidence 469999988654
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=5.1e-07 Score=70.95 Aligned_cols=132 Identities=22% Similarity=0.150 Sum_probs=92.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+.++||||||.+|.+++++|.++|++|.+..|++++..... ..+.+...|+.+.+++...++ ..|
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~--------G~~ 65 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK--------GVD 65 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc--------ccc
Confidence 57999999999999999999999999999999987776654 458888999999998877776 467
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
.+++..+... ... ..............+... .....++.+|+..+.. .....|..+|...+..
T Consensus 66 ~~~~i~~~~~-~~~---------~~~~~~~~~~~~~a~~a~-----~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~ 128 (275)
T COG0702 66 GVLLISGLLD-GSD---------AFRAVQVTAVVRAAEAAG-----AGVKHGVSLSVLGADA--ASPSALARAKAAVEAA 128 (275)
T ss_pred EEEEEecccc-ccc---------chhHHHHHHHHHHHHHhc-----CCceEEEEeccCCCCC--CCccHHHHHHHHHHHH
Confidence 7777777543 211 011122333444444331 1245667766655443 2346789999888888
Q ss_pred HHHH
Q 028868 161 TKNL 164 (202)
Q Consensus 161 ~~~l 164 (202)
.++.
T Consensus 129 l~~s 132 (275)
T COG0702 129 LRSS 132 (275)
T ss_pred HHhc
Confidence 7754
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.76 E-value=6.2e-08 Score=80.34 Aligned_cols=78 Identities=26% Similarity=0.232 Sum_probs=59.5
Q ss_pred CEEEEecC----------------CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 028868 1 MTALVTGG----------------TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 1 k~~lItGa----------------s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i 64 (202)
|++||||| ||++|.++|++|+++|++|++++++.+ +. . .. ....+|+++.+++
T Consensus 189 k~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~-------~-~~--~~~~~dv~~~~~~ 257 (399)
T PRK05579 189 KRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP-------T-PA--GVKRIDVESAQEM 257 (399)
T ss_pred CEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc-------C-CC--CcEEEccCCHHHH
Confidence 68999999 555999999999999999999998752 11 1 11 1345799988887
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCCCCCCC
Q 028868 65 EKLIETVTSIFQGKLNILINNAAIAFVKP 93 (202)
Q Consensus 65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 93 (202)
.+.+. +.+ +++|++||+||+....+
T Consensus 258 ~~~v~---~~~-~~~DilI~~Aav~d~~~ 282 (399)
T PRK05579 258 LDAVL---AAL-PQADIFIMAAAVADYRP 282 (399)
T ss_pred HHHHH---Hhc-CCCCEEEEccccccccc
Confidence 66655 446 68999999999875554
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.9e-07 Score=77.99 Aligned_cols=183 Identities=21% Similarity=0.230 Sum_probs=118.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--C-EEEEEeCChh------HHHH-----HHHHHHhc----CCeEEEEEecCCCHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--A-IVHTCSRNQI------ELDA-----RLHEWKNK----GFKVTGSVCDLSSRE 62 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~-~Vi~~~r~~~------~~~~-----~~~~~~~~----~~~v~~~~~Dv~~~~ 62 (202)
|+++||||+|++|+-+..+|++.- . ++.++-|... ++.. +-+.+.+. -.++..+..|+++++
T Consensus 13 k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~~ 92 (467)
T KOG1221|consen 13 KTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEPD 92 (467)
T ss_pred CeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCcc
Confidence 789999999999999999999764 1 6777766421 1111 11222221 246788888888753
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc
Q 028868 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR 142 (202)
Q Consensus 63 ~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 142 (202)
-=-+.-+. +... ..+|+|||+|+.... .+..+..+.+|.+|+..+++.+..+.+ ...++.+|+.....
T Consensus 93 LGis~~D~-~~l~-~eV~ivih~AAtvrF-------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVSTAy~n~ 160 (467)
T KOG1221|consen 93 LGISESDL-RTLA-DEVNIVIHSAATVRF-------DEPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVSTAYSNC 160 (467)
T ss_pred cCCChHHH-HHHH-hcCCEEEEeeeeecc-------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEeehhheec
Confidence 21000000 0111 468999999997642 245678889999999999998865543 35788888865441
Q ss_pred C--------CC------C--------------------------ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCc
Q 028868 143 G--------IP------S--------------------------VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWV 182 (202)
Q Consensus 143 ~--------~~------~--------------------------~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~ 182 (202)
. ++ + -..|.-+|+..+++...- ..++.+..+.|..
T Consensus 161 ~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~-----~~~lPivIiRPsi 235 (467)
T KOG1221|consen 161 NVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKE-----AENLPLVIIRPSI 235 (467)
T ss_pred ccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhh-----ccCCCeEEEcCCc
Confidence 1 11 0 113666776666665533 2458889999999
Q ss_pred ccCCCccchhhhccccCC
Q 028868 183 IKTSMIKPFEVLSVGIKG 200 (202)
Q Consensus 183 v~t~~~~~~~~~~~~~~~ 200 (202)
|-+....+++.+.....|
T Consensus 236 I~st~~EP~pGWidn~~g 253 (467)
T KOG1221|consen 236 ITSTYKEPFPGWIDNLNG 253 (467)
T ss_pred eeccccCCCCCccccCCC
Confidence 988888888776655543
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.70 E-value=8.8e-07 Score=72.96 Aligned_cols=171 Identities=17% Similarity=0.168 Sum_probs=107.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHH-HHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR-EKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i-~~~~~~~~~~~~~~i 79 (202)
++|+|+||+|++|+-+.+.|.++|+.|..+.|+.++..+...+ .........+..|.....++ ....+. .....
T Consensus 80 ~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~-~~~d~~~~~v~~~~~~~~d~~~~~~~~----~~~~~ 154 (411)
T KOG1203|consen 80 TTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV-FFVDLGLQNVEADVVTAIDILKKLVEA----VPKGV 154 (411)
T ss_pred CeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc-cccccccceeeeccccccchhhhhhhh----ccccc
Confidence 4699999999999999999999999999999998887777651 11111233444444444332 222222 11235
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
.+++-++|..+... +..+. -.+.+.|..++++++ +..+..+++.+||+.+.........+.. .+...
T Consensus 155 ~~v~~~~ggrp~~e-d~~~p------~~VD~~g~knlvdA~----~~aGvk~~vlv~si~~~~~~~~~~~~~~--~~~~~ 221 (411)
T KOG1203|consen 155 VIVIKGAGGRPEEE-DIVTP------EKVDYEGTKNLVDAC----KKAGVKRVVLVGSIGGTKFNQPPNILLL--NGLVL 221 (411)
T ss_pred eeEEecccCCCCcc-cCCCc------ceecHHHHHHHHHHH----HHhCCceEEEEEeecCcccCCCchhhhh--hhhhh
Confidence 56666666543221 11122 225577888888887 5556789999999888766655554442 22222
Q ss_pred HH-HHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 160 LT-KNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 160 ~~-~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
-. +.....+..+|+.-..|.||..+.+...
T Consensus 222 ~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~ 252 (411)
T KOG1203|consen 222 KAKLKAEKFLQDSGLPYTIIRPGGLEQDTGG 252 (411)
T ss_pred HHHHhHHHHHHhcCCCcEEEeccccccCCCC
Confidence 22 2333344578999999999988765543
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.66 E-value=3.8e-07 Score=68.56 Aligned_cols=79 Identities=23% Similarity=0.228 Sum_probs=62.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+||+|++|+++++.|+++|++|++++|+.++++...+.+.+.. ......+|..+.+++.+.+. ..|
T Consensus 29 ~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~--------~~d 99 (194)
T cd01078 29 KTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK--------GAD 99 (194)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh--------cCC
Confidence 579999999999999999999999999999999988888877765321 23345678888777666553 358
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+||++...
T Consensus 100 iVi~at~~ 107 (194)
T cd01078 100 VVFAAGAA 107 (194)
T ss_pred EEEECCCC
Confidence 88886654
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.9e-07 Score=70.06 Aligned_cols=120 Identities=21% Similarity=0.246 Sum_probs=88.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
++-|.||||++|+-++.+|++.|.+|++--|..+..-.-++-+.+.| .+.++..|+.|++||.+++++ -++
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLG-Qvl~~~fd~~DedSIr~vvk~--------sNV 133 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLG-QVLFMKFDLRDEDSIRAVVKH--------SNV 133 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccccc-ceeeeccCCCCHHHHHHHHHh--------CcE
Confidence 46689999999999999999999999999886543333333333333 489999999999999999885 389
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR 142 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 142 (202)
|||-.|.-.+..- .+. -++|..+.-.+++.+ ++.+..++|.+|+..+..
T Consensus 134 VINLIGrd~eTkn--f~f------~Dvn~~~aerlAric----ke~GVerfIhvS~Lganv 182 (391)
T KOG2865|consen 134 VINLIGRDYETKN--FSF------EDVNVHIAERLARIC----KEAGVERFIHVSCLGANV 182 (391)
T ss_pred EEEeeccccccCC--ccc------ccccchHHHHHHHHH----HhhChhheeehhhccccc
Confidence 9999996433221 121 236777777777766 666677899988876553
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.60 E-value=5.9e-06 Score=60.53 Aligned_cols=150 Identities=16% Similarity=0.167 Sum_probs=100.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++-|+||||-.|..|+++..++|+.|..+.|+++++... ..+...+.|+.|.+++.+.+. ..|
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~--------g~D 64 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA--------GHD 64 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc--------CCc
Confidence 5789999999999999999999999999999999877554 247788899999888744443 579
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--------CCC--Chhh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--------IPS--VSLY 150 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------~~~--~~~y 150 (202)
.||..-|..... .+... ... .+++...++.....|++.++...+.+- .|. ...|
T Consensus 65 aVIsA~~~~~~~------~~~~~------~k~----~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~ 128 (211)
T COG2910 65 AVISAFGAGASD------NDELH------SKS----IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK 128 (211)
T ss_pred eEEEeccCCCCC------hhHHH------HHH----HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence 999988865321 11111 111 444555556656778888887665532 222 2234
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
..+++.. -+...|..+ +.+.-.-++|.....|
T Consensus 129 ~~A~~~a-e~L~~Lr~~---~~l~WTfvSPaa~f~P 160 (211)
T COG2910 129 PEALAQA-EFLDSLRAE---KSLDWTFVSPAAFFEP 160 (211)
T ss_pred HHHHHHH-HHHHHHhhc---cCcceEEeCcHHhcCC
Confidence 4444333 333444444 3488888888877665
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.57 E-value=4.2e-07 Score=74.58 Aligned_cols=77 Identities=25% Similarity=0.279 Sum_probs=66.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|.+||.|| |++|+.+|..|+++| .+|.+.+|+.++.+++..... .++.++++|+.|.+.+.+++++ .
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~---~~v~~~~vD~~d~~al~~li~~--------~ 69 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG---GKVEALQVDAADVDALVALIKD--------F 69 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc---ccceeEEecccChHHHHHHHhc--------C
Confidence 57899999 999999999999999 699999999988888876542 3799999999999988888774 2
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+||+++...
T Consensus 70 d~VIn~~p~~ 79 (389)
T COG1748 70 DLVINAAPPF 79 (389)
T ss_pred CEEEEeCCch
Confidence 9999998854
|
|
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.5e-05 Score=68.16 Aligned_cols=187 Identities=18% Similarity=0.079 Sum_probs=121.8
Q ss_pred CEEEEecCC-CchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHH----hcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGT-RGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWK----NKGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas-~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~----~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|+++||||+ +.||-+++..|+.-|++||++..+- ++.....+.+- ..+...-++..+++...+++++++++.++
T Consensus 397 ~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~e 476 (866)
T COG4982 397 KVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDE 476 (866)
T ss_pred ceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccc
Confidence 579999999 7899999999999999999876543 33344444443 23567888899999999999999999875
Q ss_pred hC-------------CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC---CCeEEEecCC
Q 028868 75 FQ-------------GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSV 138 (202)
Q Consensus 75 ~~-------------~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~ 138 (202)
.. -.++.++=-|.....+.+.+... .-+.-+++-+....+++-.+.++-..++ .-.||.-.|.
T Consensus 477 q~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~ags-raE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSP 555 (866)
T COG4982 477 QTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGS-RAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSP 555 (866)
T ss_pred cccccCCcceecccccCcceeeecccCCccCccccCCc-hHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCC
Confidence 31 13666766666544444444332 1233344444455555554433332221 2345555554
Q ss_pred CCccCCCCChhhhhhHHHHHHHHHHHHHHH--ccCCcEEEEeeCCccc-CCCccc
Q 028868 139 GGVRGIPSVSLYGAYKGAMNQLTKNLACEW--AKDNIRTNTVAPWVIK-TSMIKP 190 (202)
Q Consensus 139 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~--~~~gi~v~~v~pG~v~-t~~~~~ 190 (202)
.+..+.+.+.|+-+|++++.+.--|..|- +. -+.++--.-||+. |.++.+
T Consensus 556 -NrG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~-~vsl~~A~IGWtrGTGLMg~ 608 (866)
T COG4982 556 -NRGMFGGDGAYGESKLALDAVVNRWHSESSWAA-RVSLAHALIGWTRGTGLMGH 608 (866)
T ss_pred -CCCccCCCcchhhHHHHHHHHHHHhhccchhhH-HHHHhhhheeeeccccccCC
Confidence 24445578899999999999988777763 22 2566666778886 566543
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.52 E-value=4.2e-07 Score=75.21 Aligned_cols=79 Identities=27% Similarity=0.289 Sum_probs=59.4
Q ss_pred CEEEEecC---------------CCc-hHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 028868 1 MTALVTGG---------------TRG-IGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 1 k~~lItGa---------------s~g-iG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i 64 (202)
|+++|||| |+| +|.++|++|..+|++|+++.+..... ... ....+|+++.+++
T Consensus 186 ~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~~~~~~ 254 (390)
T TIGR00521 186 KRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVSTAEEM 254 (390)
T ss_pred ceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEeccHHHH
Confidence 67999999 666 99999999999999999988664321 111 1245799988887
Q ss_pred -HHHHHHHHHHhCCCccEEEEcCCCCCCCCC
Q 028868 65 -EKLIETVTSIFQGKLNILINNAAIAFVKPT 94 (202)
Q Consensus 65 -~~~~~~~~~~~~~~id~vi~~ag~~~~~~~ 94 (202)
++++++. + +.+|++|++||+....+.
T Consensus 255 ~~~~~~~~---~-~~~D~~i~~Aavsd~~~~ 281 (390)
T TIGR00521 255 LEAALNEL---A-KDFDIFISAAAVADFKPK 281 (390)
T ss_pred HHHHHHhh---c-ccCCEEEEcccccccccc
Confidence 5555442 3 579999999999866654
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=6.6e-07 Score=68.44 Aligned_cols=169 Identities=22% Similarity=0.159 Sum_probs=111.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHHHH-h----cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWK-N----KGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~-~~~~~~-~----~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++||||-+|.=|.-+|.-|+++|+.|..+-|..+..+. ..+.+- + .+........|++|...+.++.+.+
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i--- 105 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI--- 105 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc---
Confidence 589999999999999999999999999987776554332 233332 1 2556778889999999988888874
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC------------cc
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG------------VR 142 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~------------~~ 142 (202)
+++-+.|-|+++..+-..+++ +.+-++...|+++++.+...+--.. +.-.+-.|.+. .-
T Consensus 106 ---kPtEiYnLaAQSHVkvSFdlp----eYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSElyGkv~e~PQsE~T 176 (376)
T KOG1372|consen 106 ---KPTEVYNLAAQSHVKVSFDLP----EYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELYGKVQEIPQSETT 176 (376)
T ss_pred ---CchhhhhhhhhcceEEEeecc----cceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhcccccCCCcccCC
Confidence 578888889888766444444 3555688999999988774322111 12222222221 23
Q ss_pred CCCCChhhhhhHHHHHHHHHHHHHHH---ccCCcEEEEeeCC
Q 028868 143 GIPSVSLYGAYKGAMNQLTKNLACEW---AKDNIRTNTVAPW 181 (202)
Q Consensus 143 ~~~~~~~y~asK~a~~~~~~~la~e~---~~~gi~v~~v~pG 181 (202)
|+.+.++|+++|.+..=+.-.++..+ +=.||-+|-=+|-
T Consensus 177 PFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPR 218 (376)
T KOG1372|consen 177 PFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPR 218 (376)
T ss_pred CCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCc
Confidence 46678999999966544333343333 2235555554443
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.37 E-value=2.5e-06 Score=70.82 Aligned_cols=76 Identities=26% Similarity=0.310 Sum_probs=59.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 3 ALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+|.|+ |.+|+.+++.|++++. +|++.+|+.++++...+++ .+.++...++|+.|.+++.+++.. .|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~~--------~d 69 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLRG--------CD 69 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHTT--------SS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHhc--------CC
Confidence 689999 9999999999999874 8999999999888887665 456799999999999887777663 49
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
+|||++|-.
T Consensus 70 vVin~~gp~ 78 (386)
T PF03435_consen 70 VVINCAGPF 78 (386)
T ss_dssp EEEE-SSGG
T ss_pred EEEECCccc
Confidence 999999953
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.2e-05 Score=60.88 Aligned_cols=148 Identities=20% Similarity=0.115 Sum_probs=94.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+++|||++|=+|+||.+.+...|. +.++.... .+|+++..+.+++++. .
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------d~DLt~~a~t~~lF~~------e 54 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------DADLTNLADTRALFES------E 54 (315)
T ss_pred ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------cccccchHHHHHHHhc------c
Confidence 6899999999999999999998875 33332221 2799999999999987 5
Q ss_pred CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC-----CccC--------
Q 028868 78 KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG-----GVRG-------- 143 (202)
Q Consensus 78 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~-----~~~~-------- 143 (202)
++..|||.|+... ...-...+.|-|+..+++|-- +++.+. ..+..++++..|.. +..|
T Consensus 55 kPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indN----Vlhsa~----e~gv~K~vsclStCIfPdkt~yPIdEtmvh~ 126 (315)
T KOG1431|consen 55 KPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDN----VLHSAH----EHGVKKVVSCLSTCIFPDKTSYPIDETMVHN 126 (315)
T ss_pred CCceeeehHhhhcchhhcCCCchHHHhhcceechh----HHHHHH----HhchhhhhhhcceeecCCCCCCCCCHHHhcc
Confidence 7788888887531 111122456666665555432 233321 12223444443321 1111
Q ss_pred ---CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 144 ---IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 144 ---~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
-|..-.|+-+|+.+.-..++++.++ |-...++.|-.+..|
T Consensus 127 gpphpsN~gYsyAKr~idv~n~aY~~qh---g~~~tsviPtNvfGp 169 (315)
T KOG1431|consen 127 GPPHPSNFGYSYAKRMIDVQNQAYRQQH---GRDYTSVIPTNVFGP 169 (315)
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHh---CCceeeeccccccCC
Confidence 1123469999999888888888876 566777777777654
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.3e-06 Score=67.33 Aligned_cols=83 Identities=20% Similarity=0.115 Sum_probs=50.6
Q ss_pred CEEEEecCC----------------CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 028868 1 MTALVTGGT----------------RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 1 k~~lItGas----------------~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i 64 (202)
|++|||+|. |.||.++|++|+++|+.|+++++....... .. ..+..+..+..| .++
T Consensus 4 k~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~-~~~~~~~~V~s~----~d~ 75 (229)
T PRK09620 4 KKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI-NNQLELHPFEGI----IDL 75 (229)
T ss_pred CEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc-CCceeEEEEecH----HHH
Confidence 689999886 999999999999999999988764221100 00 011223333332 122
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCCCCCCC
Q 028868 65 EKLIETVTSIFQGKLNILINNAAIAFVKP 93 (202)
Q Consensus 65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 93 (202)
.+.+.++.+. .++|++||+|+.....+
T Consensus 76 ~~~l~~~~~~--~~~D~VIH~AAvsD~~~ 102 (229)
T PRK09620 76 QDKMKSIITH--EKVDAVIMAAAGSDWVV 102 (229)
T ss_pred HHHHHHHhcc--cCCCEEEECccccceec
Confidence 2222222211 25899999999976554
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.1e-05 Score=65.30 Aligned_cols=147 Identities=14% Similarity=0.074 Sum_probs=92.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
+++.|||++|.+|.+++..|+..+. ++++++.++ ......++.+...... ..|+++.++..+. + ..
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~~--i~~~~~~~d~~~~-------l-~~ 86 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPAQ--VRGFLGDDQLGDA-------L-KG 86 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCce--EEEEeCCCCHHHH-------c-CC
Confidence 4699999999999999999997664 899999877 2222223333222221 2233333222222 2 46
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCC----c--------cCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGG----V--------RGIP 145 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~----~--------~~~~ 145 (202)
.|+||+.||.... + ...+.+.+..|+.....+.+.+ .+.. .+.++.+|.... . .++|
T Consensus 87 aDiVVitAG~~~~-~-----g~~R~dll~~N~~i~~~i~~~i----~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p 156 (323)
T PLN00106 87 ADLVIIPAGVPRK-P-----GMTRDDLFNINAGIVKTLCEAV----AKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYD 156 (323)
T ss_pred CCEEEEeCCCCCC-C-----CCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCC
Confidence 8999999997532 1 1236778888988766666655 5443 345555666654 2 2355
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWA 169 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~ 169 (202)
+.-.|+.++.--..|-..++.++.
T Consensus 157 ~~~viG~~~LDs~Rl~~~lA~~lg 180 (323)
T PLN00106 157 PKKLFGVTTLDVVRANTFVAEKKG 180 (323)
T ss_pred cceEEEEecchHHHHHHHHHHHhC
Confidence 667788887555566677777764
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.2e-05 Score=56.97 Aligned_cols=73 Identities=23% Similarity=0.347 Sum_probs=54.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|.|+ ||.|++++..|.++|++ |.++.|+.++.+.+.+.+. +..+.++..+ + +.+.+ ...
T Consensus 13 ~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~~~--~---~~~~~--------~~~ 76 (135)
T PF01488_consen 13 KRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIPLE--D---LEEAL--------QEA 76 (135)
T ss_dssp SEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEEGG--G---HCHHH--------HTE
T ss_pred CEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceeeHH--H---HHHHH--------hhC
Confidence 67999998 89999999999999995 9999999999998888872 2234444433 2 11111 357
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|++|++.+..
T Consensus 77 DivI~aT~~~ 86 (135)
T PF01488_consen 77 DIVINATPSG 86 (135)
T ss_dssp SEEEE-SSTT
T ss_pred CeEEEecCCC
Confidence 9999998864
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.5e-05 Score=64.49 Aligned_cols=156 Identities=15% Similarity=0.088 Sum_probs=91.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
+++.|||++|.+|..++..|+.++ .++++++++ +......++.+...+. ...+.+|..+.. +. + ..
T Consensus 9 ~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~--~~~g~a~Dl~~~~~~~--~v~~~td~~~~~---~~----l-~g 76 (321)
T PTZ00325 9 FKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV--GAPGVAADLSHIDTPA--KVTGYADGELWE---KA----L-RG 76 (321)
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC--CCcccccchhhcCcCc--eEEEecCCCchH---HH----h-CC
Confidence 478999999999999999999655 589999983 3333233443322222 223444432211 11 2 36
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC-------------CccCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG-------------GVRGIP 145 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~-------------~~~~~~ 145 (202)
.|+||+++|.... +.+.+.+.+..|+...-.+.+.+ ++.+..++|+++|-- ...++|
T Consensus 77 aDvVVitaG~~~~------~~~tR~dll~~N~~i~~~i~~~i----~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p 146 (321)
T PTZ00325 77 ADLVLICAGVPRK------PGMTRDDLFNTNAPIVRDLVAAV----ASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYD 146 (321)
T ss_pred CCEEEECCCCCCC------CCCCHHHHHHHHHHHHHHHHHHH----HHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCC
Confidence 8999999997432 11235677888888777766655 555556777766632 112345
Q ss_pred CChhhhhhHHHHHH--HHHHHHHHHccCCcEEEEeeCCccc
Q 028868 146 SVSLYGAYKGAMNQ--LTKNLACEWAKDNIRTNTVAPWVIK 184 (202)
Q Consensus 146 ~~~~y~asK~a~~~--~~~~la~e~~~~gi~v~~v~pG~v~ 184 (202)
+...|+.+ .++. |-..++..+ |+....|+ ++|.
T Consensus 147 ~~~viG~g--~LDs~R~r~~la~~l---~v~~~~V~-~~Vl 181 (321)
T PTZ00325 147 PRKLFGVT--TLDVVRARKFVAEAL---GMNPYDVN-VPVV 181 (321)
T ss_pred hhheeech--hHHHHHHHHHHHHHh---CcChhheE-EEEE
Confidence 55567775 2332 222344443 45555555 4443
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.1e-05 Score=64.90 Aligned_cols=78 Identities=17% Similarity=0.210 Sum_probs=67.5
Q ss_pred EEEecCCCchHHHHHHHHHH----CCCEEEEEeCChhHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 3 ALVTGGTRGIGHATVEELAR----FGAIVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~----~g~~Vi~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
++|.||||..|.-+.+++.+ .|....+.+|+++++.+.++.+.+.. ....++-+|.+|++++.+.+.+
T Consensus 8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~---- 83 (423)
T KOG2733|consen 8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ---- 83 (423)
T ss_pred EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh----
Confidence 79999999999999999999 78899999999999999999887653 2234888999999998888775
Q ss_pred hCCCccEEEEcCCC
Q 028868 75 FQGKLNILINNAAI 88 (202)
Q Consensus 75 ~~~~id~vi~~ag~ 88 (202)
-.+++||+|-
T Consensus 84 ----~~vivN~vGP 93 (423)
T KOG2733|consen 84 ----ARVIVNCVGP 93 (423)
T ss_pred ----hEEEEecccc
Confidence 3889999994
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=1.4e-05 Score=67.67 Aligned_cols=74 Identities=18% Similarity=0.279 Sum_probs=55.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|+|+++ +|.++|+.|+++|++|.+++++. +.+....+++...+ +.++..|..+ +.. +.+
T Consensus 6 k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~--~~~~~~~~~~------------~~~-~~~ 69 (450)
T PRK14106 6 KKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELG--IELVLGEYPE------------EFL-EGV 69 (450)
T ss_pred CEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CEEEeCCcch------------hHh-hcC
Confidence 6899999876 99999999999999999999975 44444455554433 4566777775 112 468
Q ss_pred cEEEEcCCCCC
Q 028868 80 NILINNAAIAF 90 (202)
Q Consensus 80 d~vi~~ag~~~ 90 (202)
|+||+++|...
T Consensus 70 d~vv~~~g~~~ 80 (450)
T PRK14106 70 DLVVVSPGVPL 80 (450)
T ss_pred CEEEECCCCCC
Confidence 99999999753
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.07 E-value=2.8e-05 Score=63.14 Aligned_cols=117 Identities=13% Similarity=0.150 Sum_probs=67.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCC-------CEEEEEeCChh--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFG-------AIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVT 72 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g-------~~Vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~ 72 (202)
+++||||+|.+|.+++..|+..+ +.|++.++++. ++.....++.+. ......|+....+ +.
T Consensus 4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~---~~~~~~~~~~~~~-------~~ 73 (325)
T cd01336 4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC---AFPLLKSVVATTD-------PE 73 (325)
T ss_pred EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc---cccccCCceecCC-------HH
Confidence 58999999999999999999844 58999999653 222211111110 0011123322222 22
Q ss_pred HHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC--CCCeEEEecCCC
Q 028868 73 SIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVG 139 (202)
Q Consensus 73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~ 139 (202)
+.+ ...|+|||+||..... ..+. .+.++.|+. +++...+.+.+. ..+.++.+|...
T Consensus 74 ~~l-~~aDiVI~tAG~~~~~---~~~R---~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPv 131 (325)
T cd01336 74 EAF-KDVDVAILVGAMPRKE---GMER---KDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGNPA 131 (325)
T ss_pred HHh-CCCCEEEEeCCcCCCC---CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecCcH
Confidence 223 4689999999975331 1232 445556665 444444445544 256777777654
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.8e-05 Score=64.26 Aligned_cols=69 Identities=25% Similarity=0.234 Sum_probs=51.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-C-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-G-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|.||+.+|++|+++ | .+++++.|+++++....+++.. .|+. ++. +.+ ..
T Consensus 156 k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~~l-~~ 215 (340)
T PRK14982 156 ATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------EAL-PE 215 (340)
T ss_pred CEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------HHH-cc
Confidence 68999999999999999999865 5 4899999998887776655421 1222 121 223 46
Q ss_pred ccEEEEcCCCC
Q 028868 79 LNILINNAAIA 89 (202)
Q Consensus 79 id~vi~~ag~~ 89 (202)
.|+||+.++..
T Consensus 216 aDiVv~~ts~~ 226 (340)
T PRK14982 216 ADIVVWVASMP 226 (340)
T ss_pred CCEEEECCcCC
Confidence 89999999874
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=97.98 E-value=0.00023 Score=56.81 Aligned_cols=136 Identities=21% Similarity=0.278 Sum_probs=82.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+++++|.++++.+..+|.+|+.+++++++.+.+. ++ +.+. .+|..+.+..+.+.+.. . +..+|
T Consensus 146 ~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~---~~~~~~~~~~~~~~~~~-~--~~~~d 215 (325)
T cd08253 146 ETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QA---GADA---VFNYRAEDLADRILAAT-A--GQGVD 215 (325)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCCE---EEeCCCcCHHHHHHHHc-C--CCceE
Confidence 47899999999999999999999999999999887665542 22 3221 13445444444433322 1 13699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC------------CccCCCCCh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG------------GVRGIPSVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~------------~~~~~~~~~ 148 (202)
.+++++|... .+. ....++ ..|+++.+++.. .....++..
T Consensus 216 ~vi~~~~~~~-----------~~~---------------~~~~l~--~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (325)
T cd08253 216 VIIEVLANVN-----------LAK---------------DLDVLA--PGGRIVVYGSGGLRGTIPINPLMAKEASIRGVL 267 (325)
T ss_pred EEEECCchHH-----------HHH---------------HHHhhC--CCCEEEEEeecCCcCCCChhHHHhcCceEEeee
Confidence 9999987310 110 012232 357888887632 011112233
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcE
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIR 174 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~ 174 (202)
.|...|.....+.+.+...+....++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~i~ 293 (325)
T cd08253 268 LYTATPEERAAAAEAIAAGLADGALR 293 (325)
T ss_pred hhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence 46677777777777776666544444
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.96 E-value=6.1e-06 Score=62.84 Aligned_cols=155 Identities=15% Similarity=0.232 Sum_probs=100.2
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 2 TALVTGGTRGIGHATVEELARF-GA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~-g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++||||+-|.+|..+|..|-.+ |. .|++.+-.... +.+.+ .=.++..|+-|.+++++++-. .+|
T Consensus 46 rvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp-----~~V~~---~GPyIy~DILD~K~L~eIVVn------~RI 111 (366)
T KOG2774|consen 46 RVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP-----ANVTD---VGPYIYLDILDQKSLEEIVVN------KRI 111 (366)
T ss_pred eEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc-----hhhcc---cCCchhhhhhccccHHHhhcc------ccc
Confidence 5899999999999999988754 65 67765432111 11111 124677899998888877653 589
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC------CC------CC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG------IP------SV 147 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~------~~------~~ 147 (202)
|-+||-.+.... .-+.++-...++|+.|..++++.+ ++. +-++..-|.+.++.| .| +.
T Consensus 112 dWL~HfSALLSA-----vGE~NVpLA~~VNI~GvHNil~vA----a~~-kL~iFVPSTIGAFGPtSPRNPTPdltIQRPR 181 (366)
T KOG2774|consen 112 DWLVHFSALLSA-----VGETNVPLALQVNIRGVHNILQVA----AKH-KLKVFVPSTIGAFGPTSPRNPTPDLTIQRPR 181 (366)
T ss_pred ceeeeHHHHHHH-----hcccCCceeeeecchhhhHHHHHH----HHc-CeeEeecccccccCCCCCCCCCCCeeeecCc
Confidence 999997764211 122334456679999999998876 332 223433444444433 22 45
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEe-eCCcc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTV-APWVI 183 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v-~pG~v 183 (202)
..|+.||.-.+.+-+.+...+ |+.+-++ .||.+
T Consensus 182 TIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~i 215 (366)
T KOG2774|consen 182 TIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGII 215 (366)
T ss_pred eeechhHHHHHHHHHHHHhhc---CccceecccCccc
Confidence 689999999888888777665 4544444 35544
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00015 Score=57.40 Aligned_cols=72 Identities=17% Similarity=0.266 Sum_probs=53.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+|+ ||+|++++..|++.|++|.+.+|++++.+.+.+.+...+. +.....| + . .. ...|
T Consensus 118 k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~-----~---~------~~-~~~D 180 (270)
T TIGR00507 118 QRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMD-----E---L------PL-HRVD 180 (270)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechh-----h---h------cc-cCcc
Confidence 57899999 6999999999999999999999999888887777654332 2222111 1 0 11 3589
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
+||++.+..
T Consensus 181 ivInatp~g 189 (270)
T TIGR00507 181 LIINATSAG 189 (270)
T ss_pred EEEECCCCC
Confidence 999999875
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00015 Score=52.20 Aligned_cols=72 Identities=19% Similarity=0.293 Sum_probs=52.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|+|+ |++|.++++.|.+.| .+|.+.+|++++.+...+++.... +..+.++..+. . ...
T Consensus 20 ~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~-~~~ 82 (155)
T cd01065 20 KKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L-AEA 82 (155)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c-ccC
Confidence 57899998 899999999999996 789999999988877776654321 12233332221 2 468
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+||++....
T Consensus 83 Dvvi~~~~~~ 92 (155)
T cd01065 83 DLIINTTPVG 92 (155)
T ss_pred CEEEeCcCCC
Confidence 9999999864
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0011 Score=47.23 Aligned_cols=114 Identities=12% Similarity=0.129 Sum_probs=73.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc---C-CeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---G-FKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~---~-~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+||+|.+|.++|..|...+. ++++.++++++++....++.+. . ........|..+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~-------------- 66 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEA-------------- 66 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGG--------------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccc--------------
Confidence 4789999999999999999999875 8999999998887777777643 1 233333322111
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVG 139 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~ 139 (202)
+ ..-|++|..+|.... +- .+ -.+.++.|..-.-. ..+.+.+ ...+.++.+|...
T Consensus 67 ~-~~aDivvitag~~~~-~g--~s---R~~ll~~N~~i~~~----~~~~i~~~~p~~~vivvtNPv 121 (141)
T PF00056_consen 67 L-KDADIVVITAGVPRK-PG--MS---RLDLLEANAKIVKE----IAKKIAKYAPDAIVIVVTNPV 121 (141)
T ss_dssp G-TTESEEEETTSTSSS-TT--SS---HHHHHHHHHHHHHH----HHHHHHHHSTTSEEEE-SSSH
T ss_pred c-ccccEEEEecccccc-cc--cc---HHHHHHHhHhHHHH----HHHHHHHhCCccEEEEeCCcH
Confidence 2 468999999997532 11 23 23445666654333 3443343 3456777776643
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.0003 Score=58.52 Aligned_cols=81 Identities=11% Similarity=0.038 Sum_probs=54.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+|||||++..+|.++++.|.+.|++|++++.++.........+. ....+...-.+.+...+.+.++.+.. ++|
T Consensus 5 ~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d----~~~~~p~p~~d~~~~~~~L~~i~~~~--~id 78 (389)
T PRK06849 5 KTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVD----GFYTIPSPRWDPDAYIQALLSIVQRE--NID 78 (389)
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhh----heEEeCCCCCCHHHHHHHHHHHHHHc--CCC
Confidence 689999999999999999999999999999988655443222221 12333223334444444444454443 589
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
++|-...
T Consensus 79 ~vIP~~e 85 (389)
T PRK06849 79 LLIPTCE 85 (389)
T ss_pred EEEECCh
Confidence 9987665
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.00077 Score=67.49 Aligned_cols=175 Identities=17% Similarity=0.153 Sum_probs=110.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
.++|++..++++.+++.+|.++|+.|+++...... .+........+..+.+.-.++.++..+++.+.+.. +.++.
T Consensus 1757 ~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g 1831 (2582)
T TIGR02813 1757 NALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV----SHSASPLASAIASVTLGTIDDTSIEAVIKDIEEKT-AQIDG 1831 (2582)
T ss_pred eeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc----cccccccccccccccccccchHHHHHHHHhhhccc-cccce
Confidence 46777778899999999999999998877533211 11101112223334455566677787877776654 68999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhh--------hhh
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLY--------GAY 153 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y--------~as 153 (202)
+||..+..... ....+.-.....-...+...+.+.|.+.+.+..++...++.++...|..+..+.... ...
T Consensus 1832 ~i~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~~~~~~ 1910 (2582)
T TIGR02813 1832 FIHLQPQHKSV-ADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQVKAELN 1910 (2582)
T ss_pred EEEeccccccc-cccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCccccccccccccchh
Confidence 99977754210 000000001111113344566777777666655556789999988776665432221 235
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWV 182 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~ 182 (202)
++++.+|+|+++.|++.--+|...+.|..
T Consensus 1911 ~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813 1911 QAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred hhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence 79999999999999987778888888763
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=9.7e-05 Score=62.53 Aligned_cols=78 Identities=21% Similarity=0.355 Sum_probs=52.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|||+++ +|.++|+.|+++|++|++.+++........+++...+..+. ..+.. .++ .+ ..+|
T Consensus 6 k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~--~~~~~--~~~---~~-------~~~d 70 (447)
T PRK02472 6 KKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI--CGSHP--LEL---LD-------EDFD 70 (447)
T ss_pred CEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE--eCCCC--HHH---hc-------CcCC
Confidence 6799999975 99999999999999999999876444444445554443332 11111 111 11 2479
Q ss_pred EEEEcCCCCCCCC
Q 028868 81 ILINNAAIAFVKP 93 (202)
Q Consensus 81 ~vi~~ag~~~~~~ 93 (202)
.||+++|+....+
T Consensus 71 ~vV~s~gi~~~~~ 83 (447)
T PRK02472 71 LMVKNPGIPYTNP 83 (447)
T ss_pred EEEECCCCCCCCH
Confidence 9999999865443
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00067 Score=54.83 Aligned_cols=117 Identities=16% Similarity=0.109 Sum_probs=64.7
Q ss_pred CEEEEecCCCchHHHHHHHHHH-C--CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELAR-F--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~-~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+++|+||+|++|.+++..+.. . +..+++.++++. .....-.+.+.........++-.+ + .+.+ .
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~~~~~i~~~~~~d---~-------~~~l-~ 68 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIPTAVKIKGFSGED---P-------TPAL-E 68 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCCCCceEEEeCCCC---H-------HHHc-C
Confidence 6899999999999999998855 3 347888888743 211111222211111111111111 1 1112 3
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCC
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVG 139 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~ 139 (202)
..|+||.++|...... .+ -.+.+..|....-.+++.+ .+.. .+.|+.+|...
T Consensus 69 ~~DiVIitaG~~~~~~---~~---R~dll~~N~~i~~~ii~~i----~~~~~~~ivivvsNP~ 121 (312)
T PRK05086 69 GADVVLISAGVARKPG---MD---RSDLFNVNAGIVKNLVEKV----AKTCPKACIGIITNPV 121 (312)
T ss_pred CCCEEEEcCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHH----HHhCCCeEEEEccCch
Confidence 5899999999753211 12 2455667776555555544 4443 34555555555
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00014 Score=56.97 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=54.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+|||+- |+.++++|.++|++|+++.+++.......+ .+ ...+..+.-+.+++.+++.+ .++|
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g--~~~v~~g~l~~~~l~~~l~~------~~i~ 67 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQ--ALTVHTGALDPQELREFLKR------HSID 67 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cC--CceEEECCCCHHHHHHHHHh------cCCC
Confidence 57999999987 999999999999999999998764433321 11 22344566677776666654 4789
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.||+.+.
T Consensus 68 ~VIDAtH 74 (256)
T TIGR00715 68 ILVDATH 74 (256)
T ss_pred EEEEcCC
Confidence 9999776
|
This enzyme was found to be a monomer by gel filtration. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0021 Score=51.72 Aligned_cols=77 Identities=22% Similarity=0.351 Sum_probs=54.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+++++|.++++.+..+|++|+++++++++.+.+ .. .+.+. ..|..+.+..+.+..... +..+|
T Consensus 168 ~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~---~~~~~---~~~~~~~~~~~~~~~~~~---~~~~d 237 (342)
T cd08266 168 ETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KE---LGADY---VIDYRKEDFVREVRELTG---KRGVD 237 (342)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HH---cCCCe---EEecCChHHHHHHHHHhC---CCCCc
Confidence 3689999999999999999999999999999988766544 22 22221 235565555555444322 13699
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
++++++|
T Consensus 238 ~~i~~~g 244 (342)
T cd08266 238 VVVEHVG 244 (342)
T ss_pred EEEECCc
Confidence 9999988
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00037 Score=53.65 Aligned_cols=76 Identities=14% Similarity=0.221 Sum_probs=58.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|.++|.|+ |-+|..+|+.|.+.|++|++++++++..+...+. ...++.+..|-++++.++++=- ...|
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi-------~~aD 68 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGI-------DDAD 68 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCC-------CcCC
Confidence 57888888 6999999999999999999999999887775442 1258888899999776554411 2467
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++-..|-
T Consensus 69 ~vva~t~~ 76 (225)
T COG0569 69 AVVAATGN 76 (225)
T ss_pred EEEEeeCC
Confidence 77766663
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00035 Score=52.07 Aligned_cols=70 Identities=29% Similarity=0.321 Sum_probs=42.0
Q ss_pred CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCCC
Q 028868 9 TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 9 s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag~ 88 (202)
||-+|.++|+.++.+|++|+++.... .+.. ...+..+. +.. .++.++.+.+.+ ..-|++|++|++
T Consensus 28 SG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~--------p~~~~~i~--v~s---a~em~~~~~~~~-~~~Di~I~aAAV 92 (185)
T PF04127_consen 28 SGKMGAALAEEAARRGAEVTLIHGPS-SLPP--------PPGVKVIR--VES---AEEMLEAVKELL-PSADIIIMAAAV 92 (185)
T ss_dssp -SHHHHHHHHHHHHTT-EEEEEE-TT-S------------TTEEEEE---SS---HHHHHHHHHHHG-GGGSEEEE-SB-
T ss_pred cCHHHHHHHHHHHHCCCEEEEEecCc-cccc--------cccceEEE--ecc---hhhhhhhhcccc-CcceeEEEecch
Confidence 57899999999999999999887663 1111 12344443 443 444555555555 456999999999
Q ss_pred CCCCC
Q 028868 89 AFVKP 93 (202)
Q Consensus 89 ~~~~~ 93 (202)
+...+
T Consensus 93 sDf~p 97 (185)
T PF04127_consen 93 SDFRP 97 (185)
T ss_dssp -SEEE
T ss_pred hheee
Confidence 86654
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0027 Score=51.21 Aligned_cols=114 Identities=15% Similarity=0.114 Sum_probs=73.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++.|.|+ |++|.++|..|+..| .+|+++++++++.+....++.+. +...... . .+. +.
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~-------~~---- 65 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDY-------SD---- 65 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCH-------HH----
Confidence 57899997 899999999999999 58999999998888877777543 1122221 1 221 11
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG 140 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 140 (202)
+ ..-|++|+++|.... + ..+. .+.++.|..= ++...+.+++. ..+.++++|....
T Consensus 66 l-~~aDIVIitag~~~~-~--g~~R---~dll~~N~~i----~~~~~~~i~~~~~~~~vivvsNP~d 121 (306)
T cd05291 66 C-KDADIVVITAGAPQK-P--GETR---LDLLEKNAKI----MKSIVPKIKASGFDGIFLVASNPVD 121 (306)
T ss_pred h-CCCCEEEEccCCCCC-C--CCCH---HHHHHHHHHH----HHHHHHHHHHhCCCeEEEEecChHH
Confidence 1 367999999997532 2 1232 3445566553 34444444443 3567777776543
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.001 Score=53.36 Aligned_cols=74 Identities=19% Similarity=0.164 Sum_probs=58.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
.++|.||+|..|.-+|++|+++|.+-.+.+|+..++..+.+.|. .+...+.+++ ++.+++.+. ..++
T Consensus 8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG---~~~~~~p~~~--p~~~~~~~~--------~~~V 74 (382)
T COG3268 8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG---PEAAVFPLGV--PAALEAMAS--------RTQV 74 (382)
T ss_pred eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC---ccccccCCCC--HHHHHHHHh--------cceE
Confidence 47999999999999999999999999999999999988887763 3555555555 333333333 5699
Q ss_pred EEEcCCC
Q 028868 82 LINNAAI 88 (202)
Q Consensus 82 vi~~ag~ 88 (202)
|+||+|=
T Consensus 75 VlncvGP 81 (382)
T COG3268 75 VLNCVGP 81 (382)
T ss_pred EEecccc
Confidence 9999993
|
|
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00037 Score=56.53 Aligned_cols=148 Identities=14% Similarity=0.118 Sum_probs=92.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCChh--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
+++.|+||+|.+|.++|..|+..|. .+++.+.+++ +++....++.+....... ...++. ++ .
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~i~~-~~----~--- 73 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA-EIVITD-DP----N--- 73 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccC-ceEEec-Cc----H---
Confidence 4789999999999999999998875 6999998543 355555555432100000 011111 01 1
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--CCeEEEecCCCCc--------
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGV-------- 141 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~-------- 141 (202)
+.+ ..-|++|.+||.... + ..+. .+.++.|+. +++.+.+.+.+.. .+.++++|.....
T Consensus 74 -~~~-~daDivvitaG~~~k-~--g~tR---~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~ 141 (322)
T cd01338 74 -VAF-KDADWALLVGAKPRG-P--GMER---ADLLKANGK----IFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKN 141 (322)
T ss_pred -HHh-CCCCEEEEeCCCCCC-C--CCcH---HHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHH
Confidence 112 468999999997532 2 1232 234556655 5555555555543 5777777775532
Q ss_pred c-CCCCChhhhhhHHHHHHHHHHHHHHHc
Q 028868 142 R-GIPSVSLYGAYKGAMNQLTKNLACEWA 169 (202)
Q Consensus 142 ~-~~~~~~~y~asK~a~~~~~~~la~e~~ 169 (202)
. ..|....|+.++.--..|...++..+.
T Consensus 142 sg~~p~~~ViG~t~LDs~Rl~~~la~~lg 170 (322)
T cd01338 142 APDIPPDNFTAMTRLDHNRAKSQLAKKAG 170 (322)
T ss_pred cCCCChHheEEehHHHHHHHHHHHHHHhC
Confidence 2 266667899999888888888888874
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.001 Score=53.11 Aligned_cols=46 Identities=17% Similarity=0.224 Sum_probs=40.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK 47 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~ 47 (202)
|+++|.|+ ||.|++++..|++.|. +|.+++|+.++.+.+.+.+...
T Consensus 128 k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~ 174 (284)
T PRK12549 128 ERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR 174 (284)
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh
Confidence 57899998 7999999999999998 8999999999998888877543
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00063 Score=55.35 Aligned_cols=77 Identities=22% Similarity=0.380 Sum_probs=52.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-Cc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~i 79 (202)
.++||+||+||+|....+..-..|++++++..++++.+ .+.++ +.+... |-.+.+ +.+++++..++ .+
T Consensus 144 ~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~l---GAd~vi---~y~~~~----~~~~v~~~t~g~gv 212 (326)
T COG0604 144 ETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKEL---GADHVI---NYREED----FVEQVRELTGGKGV 212 (326)
T ss_pred CEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhc---CCCEEE---cCCccc----HHHHHHHHcCCCCc
Confidence 47999999999999998888889987777777766665 44433 433222 222222 44555554444 59
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+++...|.
T Consensus 213 Dvv~D~vG~ 221 (326)
T COG0604 213 DVVLDTVGG 221 (326)
T ss_pred eEEEECCCH
Confidence 999999984
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.013 Score=46.33 Aligned_cols=31 Identities=29% Similarity=0.367 Sum_probs=27.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|+|.|+ ||+|.++|+.|++.|. ++.+++.+
T Consensus 32 ~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 32 HICVVGI-GGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 5788888 6999999999999995 88888865
|
|
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0055 Score=52.64 Aligned_cols=82 Identities=20% Similarity=0.191 Sum_probs=54.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCH-------------HHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-------------EQREKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-------------~~i~~~ 67 (202)
.+++|+|+ |.+|...++.+...|++|+++++++++++.+.+ .|.+...+ |..+. +..+..
T Consensus 166 ~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes----lGA~~v~i--~~~e~~~~~~gya~~~s~~~~~~~ 238 (509)
T PRK09424 166 AKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES----MGAEFLEL--DFEEEGGSGDGYAKVMSEEFIKAE 238 (509)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeEEEe--ccccccccccchhhhcchhHHHHH
Confidence 36899998 799999999999999999999999887765543 34443322 22221 112222
Q ss_pred HHHHHHHhCCCccEEEEcCCCCC
Q 028868 68 IETVTSIFQGKLNILINNAAIAF 90 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~ 90 (202)
.+.+.+.. ...|++|.++|+..
T Consensus 239 ~~~~~~~~-~gaDVVIetag~pg 260 (509)
T PRK09424 239 MALFAEQA-KEVDIIITTALIPG 260 (509)
T ss_pred HHHHHhcc-CCCCEEEECCCCCc
Confidence 22222222 46899999999743
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00057 Score=54.34 Aligned_cols=72 Identities=19% Similarity=0.305 Sum_probs=52.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|+|+ ||+|++++..|..+| .+|.+++|+.++.+.+.+++.... .+. .++ +. .+.. ...
T Consensus 124 k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~~---~~~----~~-------~~~~-~~~ 186 (278)
T PRK00258 124 KRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KAE---LDL----EL-------QEEL-ADF 186 (278)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-cee---ecc----cc-------hhcc-ccC
Confidence 57899998 899999999999999 699999999998888877764321 111 111 00 1111 457
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+||++....
T Consensus 187 DivInaTp~g 196 (278)
T PRK00258 187 DLIINATSAG 196 (278)
T ss_pred CEEEECCcCC
Confidence 9999998754
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0032 Score=52.10 Aligned_cols=73 Identities=21% Similarity=0.251 Sum_probs=51.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++|+|+ |.+|+..++.+...|++|++++|++++++.+...+ +..+ ..+..+.+.+.+.+ ...|+
T Consensus 169 ~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~v---~~~~~~~~~l~~~l--------~~aDv 233 (370)
T TIGR00518 169 DVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGRI---HTRYSNAYEIEDAV--------KRADL 233 (370)
T ss_pred eEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Ccee---EeccCCHHHHHHHH--------ccCCE
Confidence 5788888 79999999999999999999999987766554433 2222 23444544443332 35699
Q ss_pred EEEcCCCC
Q 028868 82 LINNAAIA 89 (202)
Q Consensus 82 vi~~ag~~ 89 (202)
+|+++++.
T Consensus 234 VI~a~~~~ 241 (370)
T TIGR00518 234 LIGAVLIP 241 (370)
T ss_pred EEEccccC
Confidence 99998763
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.015 Score=44.95 Aligned_cols=139 Identities=15% Similarity=0.197 Sum_probs=76.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChh-------------------HHHHHHHHHHhcC--CeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI-------------------ELDARLHEWKNKG--FKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~-------------------~~~~~~~~~~~~~--~~v~~~~~Dv 58 (202)
++++|.|+ ||+|.++++.|++.|. ++.++|.+.- +.+.+.+.+.+.+ .++..+...+
T Consensus 12 ~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i 90 (231)
T cd00755 12 AHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFL 90 (231)
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeec
Confidence 35888888 6999999999999998 8888886531 2222333333322 3344444444
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCC
Q 028868 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV 138 (202)
Q Consensus 59 ~~~~~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~ 138 (202)
+ +++...++. .+.|+||.+... ...-..+.+.+ .+. +-.+|...+.
T Consensus 91 ~-~~~~~~l~~-------~~~D~VvdaiD~---------------------~~~k~~L~~~c----~~~-~ip~I~s~g~ 136 (231)
T cd00755 91 T-PDNSEDLLG-------GDPDFVVDAIDS---------------------IRAKVALIAYC----RKR-KIPVISSMGA 136 (231)
T ss_pred C-HhHHHHHhc-------CCCCEEEEcCCC---------------------HHHHHHHHHHH----HHh-CCCEEEEeCC
Confidence 3 222222221 346777776542 11111222332 222 2344444444
Q ss_pred CCccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcE
Q 028868 139 GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174 (202)
Q Consensus 139 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~ 174 (202)
++...+.....--.+|....-+++.+++++.+.|++
T Consensus 137 g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~ 172 (231)
T cd00755 137 GGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIF 172 (231)
T ss_pred cCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCC
Confidence 443333333334456666678899999999887774
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00055 Score=59.24 Aligned_cols=43 Identities=21% Similarity=0.123 Sum_probs=38.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
|+++|+|+ ||+|++++..|+++|++|++++|+.++.+.+.+++
T Consensus 380 k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l 422 (529)
T PLN02520 380 KLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV 422 (529)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence 57999999 69999999999999999999999988887776655
|
|
| >PRK14968 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0076 Score=44.53 Aligned_cols=119 Identities=16% Similarity=0.140 Sum_probs=70.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCe---EEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFK---VTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~---v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
+++|-.|++.|. ++..+++++.+|+.++.+++..+.+.+.+...+.. +.++..|+.+. +. ..
T Consensus 25 ~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~---~~ 89 (188)
T PRK14968 25 DRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FR---GD 89 (188)
T ss_pred CEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------cc---cc
Confidence 357888877665 56666666889999999988877776666543322 77778886441 11 13
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHh---HHHHHHHHhHHHhcCCCCeEEEecC
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES---VFHLSQLAHPLFKASGNGSIVFISS 137 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~---~~~~~~~~~~~~~~~~~~~iv~vsS 137 (202)
.+|.++.|.......+.... .+.+...+.....+ .-.+++.+.+.|+. +|.++++.+
T Consensus 90 ~~d~vi~n~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~--gG~~~~~~~ 149 (188)
T PRK14968 90 KFDVILFNPPYLPTEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKP--GGRILLLQS 149 (188)
T ss_pred CceEEEECCCcCCCCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCC--CeEEEEEEc
Confidence 68999998876543322211 12222222222222 23356777777765 456655543
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0068 Score=45.76 Aligned_cols=74 Identities=22% Similarity=0.124 Sum_probs=50.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-----------CCeEEEEEecCCCHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-----------GFKVTGSVCDLSSREQREKLIE 69 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~-----------~~~v~~~~~Dv~~~~~i~~~~~ 69 (202)
..+..||+|.||.+++++|++.|++|++..| .+++++.+.+.+... ..++.++..- .+.+.....
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~ 78 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLA 78 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHH
Confidence 3455667799999999999999999998855 455566655555321 2455555444 456667777
Q ss_pred HHHHHhCCC
Q 028868 70 TVTSIFQGK 78 (202)
Q Consensus 70 ~~~~~~~~~ 78 (202)
++.+.++++
T Consensus 79 ~l~~~~~~K 87 (211)
T COG2085 79 ELRDALGGK 87 (211)
T ss_pred HHHHHhCCe
Confidence 777766444
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0012 Score=53.52 Aligned_cols=116 Identities=13% Similarity=0.126 Sum_probs=67.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQ--IELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
++.||||+|.+|..++..|+..|. .+++.++++ +.++....++.+.. .... ...++ ...
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~--~~~i~---------~~~ 70 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLK--GVVIT---------TDP 70 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccC--CcEEe---------cCh
Confidence 589999999999999999998663 499999886 43333332222210 0000 00111 111
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC--CCCeEEEecCCC
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVG 139 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~ 139 (202)
.+.+ ...|+||+.||.... + ..+ =.+.++.|.. +++.+.+.+++. ..+.++.+|...
T Consensus 71 ~~~~-~~aDiVVitAG~~~~-~--g~t---R~dll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPv 129 (323)
T cd00704 71 EEAF-KDVDVAILVGAFPRK-P--GME---RADLLRKNAK----IFKEQGEALNKVAKPTVKVLVVGNPA 129 (323)
T ss_pred HHHh-CCCCEEEEeCCCCCC-c--CCc---HHHHHHHhHH----HHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence 2223 468999999997532 2 123 2345556655 555556655654 356777776654
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0016 Score=51.84 Aligned_cols=75 Identities=23% Similarity=0.270 Sum_probs=52.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|.|+ ||.|++++..|.+.|+ +|.++.|+.++.+++.+.+.... .+.. +...+++ .+.. ...
T Consensus 126 k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~~----~~~~~~~-------~~~~-~~~ 191 (282)
T TIGR01809 126 FRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VITR----LEGDSGG-------LAIE-KAA 191 (282)
T ss_pred ceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-ccee----ccchhhh-------hhcc-cCC
Confidence 57899988 8999999999999997 79999999998888877764321 1111 1111111 1111 357
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+|||+....
T Consensus 192 DiVInaTp~g 201 (282)
T TIGR01809 192 EVLVSTVPAD 201 (282)
T ss_pred CEEEECCCCC
Confidence 9999998764
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0036 Score=50.92 Aligned_cols=77 Identities=13% Similarity=0.200 Sum_probs=51.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|+||+|++|.+.++.....|+ +|+.+++++++.+.+.+++ +.+.. .|-.+ +++.+.+. +..+..+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~l---Ga~~v---i~~~~-~~~~~~i~---~~~~~gv 225 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSEL---GFDAA---INYKT-DNVAERLR---ELCPEGV 225 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhc---CCcEE---EECCC-CCHHHHHH---HHCCCCc
Confidence 3799999999999999887778898 8999999987776665544 32221 12222 12222222 2222469
Q ss_pred cEEEEcCC
Q 028868 80 NILINNAA 87 (202)
Q Consensus 80 d~vi~~ag 87 (202)
|+++.+.|
T Consensus 226 d~vid~~g 233 (345)
T cd08293 226 DVYFDNVG 233 (345)
T ss_pred eEEEECCC
Confidence 99999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.009 Score=46.35 Aligned_cols=76 Identities=22% Similarity=0.220 Sum_probs=50.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+++ +|.++++.+...|.+|+.+++++++.+.+ +.+ +... . .|..+.+....+. ...++.+|
T Consensus 136 ~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~~----~~~~~~~d 203 (271)
T cd05188 136 DTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA-KEL---GADH-V--IDYKEEDLEEELR----LTGGGGAD 203 (271)
T ss_pred CEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHh---CCce-e--ccCCcCCHHHHHH----HhcCCCCC
Confidence 3689999988 99999998888999999999987665444 222 2211 1 2333333333332 11125799
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++++++.
T Consensus 204 ~vi~~~~~ 211 (271)
T cd05188 204 VVIDAVGG 211 (271)
T ss_pred EEEECCCC
Confidence 99999874
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0013 Score=53.38 Aligned_cols=78 Identities=14% Similarity=0.239 Sum_probs=51.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|+||+|++|..+++.+..+|++|+.+++++++.+.+.+.+ +.+. + .|-.+.++..+.+ .+..+..+|
T Consensus 153 ~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~l---Ga~~-v--i~~~~~~~~~~~i---~~~~~~gvd 223 (338)
T cd08295 153 ETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKL---GFDD-A--FNYKEEPDLDAAL---KRYFPNGID 223 (338)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhc---CCce-e--EEcCCcccHHHHH---HHhCCCCcE
Confidence 37899999999999998888889999999999887766655433 2221 1 2222222222222 222234699
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++.+.|
T Consensus 224 ~v~d~~g 230 (338)
T cd08295 224 IYFDNVG 230 (338)
T ss_pred EEEECCC
Confidence 9999877
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0034 Score=46.10 Aligned_cols=148 Identities=20% Similarity=0.146 Sum_probs=94.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|.++|.||+|-.|..+.+++.+.+- +|+++.|.+--. .+.+..+.....|.++.++.. +.+ ..
T Consensus 19 ~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d-------~at~k~v~q~~vDf~Kl~~~a-------~~~-qg 83 (238)
T KOG4039|consen 19 MSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD-------PATDKVVAQVEVDFSKLSQLA-------TNE-QG 83 (238)
T ss_pred cceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC-------ccccceeeeEEechHHHHHHH-------hhh-cC
Confidence 4689999999999999999999985 899988874111 122446777778877754432 223 46
Q ss_pred ccEEEEcCCCCCCC----CCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAFVK----PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|+.+++-|...-+ .+...+.|. .+.+++++ +..+...++.+||..+.-+. .-.|--.|
T Consensus 84 ~dV~FcaLgTTRgkaGadgfykvDhDy-----------vl~~A~~A----Ke~Gck~fvLvSS~GAd~sS--rFlY~k~K 146 (238)
T KOG4039|consen 84 PDVLFCALGTTRGKAGADGFYKVDHDY-----------VLQLAQAA----KEKGCKTFVLVSSAGADPSS--RFLYMKMK 146 (238)
T ss_pred CceEEEeecccccccccCceEeechHH-----------HHHHHHHH----HhCCCeEEEEEeccCCCccc--ceeeeecc
Confidence 89999999876322 122233221 12233333 45556789999997655443 24577777
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.-++.=...|.- =++..+.||++..+
T Consensus 147 GEvE~~v~eL~F------~~~~i~RPG~ll~~ 172 (238)
T KOG4039|consen 147 GEVERDVIELDF------KHIIILRPGPLLGE 172 (238)
T ss_pred chhhhhhhhccc------cEEEEecCcceecc
Confidence 766655443321 26778899988643
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00072 Score=51.11 Aligned_cols=42 Identities=21% Similarity=0.139 Sum_probs=36.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE 43 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~ 43 (202)
|+++|+|.+ .+|+++|+.|.+.|++|++.+++++++....+.
T Consensus 29 k~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~ 70 (200)
T cd01075 29 KTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL 70 (200)
T ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence 689999995 999999999999999999999998777666554
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0013 Score=53.88 Aligned_cols=78 Identities=13% Similarity=0.248 Sum_probs=51.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|+|++|++|...++....+|++|+.+++++++.+.+.+++ +.+.. .|-.+.++..+.+. +..++.+|
T Consensus 160 ~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~l---Ga~~v---i~~~~~~~~~~~i~---~~~~~gvD 230 (348)
T PLN03154 160 DSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKL---GFDEA---FNYKEEPDLDAALK---RYFPEGID 230 (348)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhc---CCCEE---EECCCcccHHHHHH---HHCCCCcE
Confidence 37899999999999998888888999999998887766554333 32221 12222222222222 22234689
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++.+.|
T Consensus 231 ~v~d~vG 237 (348)
T PLN03154 231 IYFDNVG 237 (348)
T ss_pred EEEECCC
Confidence 9999887
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0032 Score=50.04 Aligned_cols=75 Identities=21% Similarity=0.293 Sum_probs=54.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|.|| ||-+++++..|++.|. ++.++.|+.++.+++.+.+.+.+..+.. .+..+.+.. ...
T Consensus 127 ~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~--~~~~~~~~~------------~~~ 191 (283)
T COG0169 127 KRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEA--AALADLEGL------------EEA 191 (283)
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccc--ccccccccc------------ccc
Confidence 46889998 7999999999999996 8999999999999988888765431111 122211110 036
Q ss_pred cEEEEcCCCCC
Q 028868 80 NILINNAAIAF 90 (202)
Q Consensus 80 d~vi~~ag~~~ 90 (202)
|++||+....-
T Consensus 192 dliINaTp~Gm 202 (283)
T COG0169 192 DLLINATPVGM 202 (283)
T ss_pred CEEEECCCCCC
Confidence 99999987653
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0055 Score=48.86 Aligned_cols=45 Identities=18% Similarity=0.248 Sum_probs=39.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKN 46 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~ 46 (202)
|+++|.|| ||-|++++-.|++.|+ +|.++.|+.++.+.+.+.+..
T Consensus 128 k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~ 173 (283)
T PRK14027 128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINN 173 (283)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhh
Confidence 57899998 8999999999999998 789999999998888777643
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0034 Score=49.49 Aligned_cols=117 Identities=12% Similarity=0.068 Sum_probs=69.1
Q ss_pred EEEecCCCchHHHHHHHHHHCC----CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 3 ALVTGGTRGIGHATVEELARFG----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g----~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
+.|+||+|.+|..++..|+..| .+|++.|.++++++....++.+..... ....++-.++. .+.+ ..
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~--~~~~i~~~~d~-------~~~~-~~ 70 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL--ADIKVSITDDP-------YEAF-KD 70 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc--cCcEEEECCch-------HHHh-CC
Confidence 4689998899999999999998 699999999988887777765432111 01111111111 1112 46
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
-|+||..+|...... .+. ...+..|+. +.+...+.+.+. ..+.++++|...
T Consensus 71 aDiVv~t~~~~~~~g---~~r---~~~~~~n~~----i~~~i~~~i~~~~p~a~~i~~tNP~ 122 (263)
T cd00650 71 ADVVIITAGVGRKPG---MGR---LDLLKRNVP----IVKEIGDNIEKYSPDAWIIVVSNPV 122 (263)
T ss_pred CCEEEECCCCCCCcC---CCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence 899999999754321 121 223333443 333344444433 356666666544
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0051 Score=48.87 Aligned_cols=78 Identities=19% Similarity=0.338 Sum_probs=52.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+++++|.++++.+..+|++|+.+++++++.+.+ .++ +.+ ...|..+.+....+.... . +..+|
T Consensus 141 ~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~---~~~~~~~~~~~~~~~~~~-~--~~~~d 210 (323)
T cd05276 141 ETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RAL---GAD---VAINYRTEDFAEEVKEAT-G--GRGVD 210 (323)
T ss_pred CEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC---EEEeCCchhHHHHHHHHh-C--CCCeE
Confidence 4689999999999999999999999999999987766554 322 222 123444333333322221 1 23699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
.+++++|.
T Consensus 211 ~vi~~~g~ 218 (323)
T cd05276 211 VILDMVGG 218 (323)
T ss_pred EEEECCch
Confidence 99999884
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.008 Score=48.39 Aligned_cols=77 Identities=14% Similarity=0.217 Sum_probs=51.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|.|+++++|.++++.+...|++|+.+++++++.+.+.+.+ +.+ .+ .|..+.+..+. +.+..++.+|
T Consensus 147 ~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~---g~~-~~--~~~~~~~~~~~----v~~~~~~~~d 216 (329)
T cd05288 147 ETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEEL---GFD-AA--INYKTPDLAEA----LKEAAPDGID 216 (329)
T ss_pred CEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhc---CCc-eE--EecCChhHHHH----HHHhccCCce
Confidence 36899999999999999999999999999999887766554323 221 11 12223222222 2222224699
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++.+.|
T Consensus 217 ~vi~~~g 223 (329)
T cd05288 217 VYFDNVG 223 (329)
T ss_pred EEEEcch
Confidence 9999887
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.003 Score=43.05 Aligned_cols=71 Identities=21% Similarity=0.177 Sum_probs=52.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
++|.|. +.+|+.+++.|.+.+.+|++++++++..+.+.++ + +.++..|.++++.++++-- .+.+.+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~----~--~~~i~gd~~~~~~l~~a~i-------~~a~~v 66 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE----G--VEVIYGDATDPEVLERAGI-------EKADAV 66 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT----T--SEEEES-TTSHHHHHHTTG-------GCESEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc----c--cccccccchhhhHHhhcCc-------cccCEE
Confidence 577888 5899999999999777999999998776555432 3 6788899999877665522 356777
Q ss_pred EEcCC
Q 028868 83 INNAA 87 (202)
Q Consensus 83 i~~ag 87 (202)
+...+
T Consensus 67 v~~~~ 71 (116)
T PF02254_consen 67 VILTD 71 (116)
T ss_dssp EEESS
T ss_pred EEccC
Confidence 76555
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0033 Score=52.77 Aligned_cols=43 Identities=9% Similarity=0.165 Sum_probs=38.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~ 44 (202)
|+++|.|+ |++|+.+++.|..+|. ++.++.|+.++.+.+.+++
T Consensus 182 kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~ 225 (414)
T PRK13940 182 KNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF 225 (414)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh
Confidence 57999999 8999999999999996 7999999988887777665
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.013 Score=47.54 Aligned_cols=114 Identities=11% Similarity=0.045 Sum_probs=73.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|+ |.+|.++|..|+..|. .+++.++++++++....++.+.. .++.. ..+ + .+. +
T Consensus 7 ~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~~--~-------~~~----~ 71 (315)
T PRK00066 7 NKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YAG--D-------YSD----C 71 (315)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-EeC--C-------HHH----h
Confidence 46899998 9999999999999987 79999999988888877776532 12222 111 1 111 2
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGG 140 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~ 140 (202)
..-|++|..+|.... + ..+. .+.++.|..-.. .+.+.+.+ ...+.++++|....
T Consensus 72 -~~adivIitag~~~k-~--g~~R---~dll~~N~~i~~----~i~~~i~~~~~~~~vivvsNP~d 126 (315)
T PRK00066 72 -KDADLVVITAGAPQK-P--GETR---LDLVEKNLKIFK----SIVGEVMASGFDGIFLVASNPVD 126 (315)
T ss_pred -CCCCEEEEecCCCCC-C--CCCH---HHHHHHHHHHHH----HHHHHHHHhCCCeEEEEccCcHH
Confidence 467999999997532 2 1232 345556655333 33444443 34567777776543
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0086 Score=48.99 Aligned_cols=77 Identities=21% Similarity=0.353 Sum_probs=51.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh---------------------hHHHHHHHHHHhc--CCeEEEEEe
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---------------------IELDARLHEWKNK--GFKVTGSVC 56 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~---------------------~~~~~~~~~~~~~--~~~v~~~~~ 56 (202)
++|+|.|+ ||+|.++|+.|+..|. ++.++|++. .+.+.+.+.+.+. ..++..+..
T Consensus 25 ~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~ 103 (338)
T PRK12475 25 KHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVT 103 (338)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEec
Confidence 46899998 7999999999999998 888998863 1333344445433 445666666
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 57 DLSSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 57 Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
|++. +++++++ ...|++|.+..
T Consensus 104 ~~~~-~~~~~~~--------~~~DlVid~~D 125 (338)
T PRK12475 104 DVTV-EELEELV--------KEVDLIIDATD 125 (338)
T ss_pred cCCH-HHHHHHh--------cCCCEEEEcCC
Confidence 7753 3333332 34677777654
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0056 Score=49.43 Aligned_cols=78 Identities=13% Similarity=0.131 Sum_probs=51.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|+||+|++|...++.....|++|+.+++++++.+.+. ++ +.+..+ |-.+.++..+..... .++.+|
T Consensus 140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~l---Ga~~vi---~~~~~~~~~~~~~~~---~~~gvd 209 (325)
T TIGR02825 140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KL---GFDVAF---NYKTVKSLEETLKKA---SPDGYD 209 (325)
T ss_pred CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-Hc---CCCEEE---eccccccHHHHHHHh---CCCCeE
Confidence 36899999999999998888888999999999887765553 32 332222 222222333333322 224699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++.+.|.
T Consensus 210 vv~d~~G~ 217 (325)
T TIGR02825 210 CYFDNVGG 217 (325)
T ss_pred EEEECCCH
Confidence 99998873
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0018 Score=45.20 Aligned_cols=85 Identities=14% Similarity=0.101 Sum_probs=54.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhc--------CCeEEEEEecCCCHHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNK--------GFKVTGSVCDLSSREQREKLIETVT 72 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~--------~~~v~~~~~Dv~~~~~i~~~~~~~~ 72 (202)
++-|+|+ |.+|.++++.|.+.|+.|..+ +|+.+..+++.+.+... -.+...+.+.+.|. .|..+.+++.
T Consensus 12 ~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~La 89 (127)
T PF10727_consen 12 KIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQLA 89 (127)
T ss_dssp EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHHHH
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHHHH
Confidence 5778888 899999999999999998866 56665666555544211 12344444555553 8888888888
Q ss_pred HH--hCCCccEEEEcCCCC
Q 028868 73 SI--FQGKLNILINNAAIA 89 (202)
Q Consensus 73 ~~--~~~~id~vi~~ag~~ 89 (202)
.. . .+=.+|+|++|-.
T Consensus 90 ~~~~~-~~g~iVvHtSGa~ 107 (127)
T PF10727_consen 90 QYGAW-RPGQIVVHTSGAL 107 (127)
T ss_dssp CC--S--TT-EEEES-SS-
T ss_pred HhccC-CCCcEEEECCCCC
Confidence 75 2 2346999999964
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0025 Score=48.83 Aligned_cols=43 Identities=26% Similarity=0.288 Sum_probs=37.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE 43 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~ 43 (202)
|++.|+||+|.+|.++++.|++.|++|++.+|++++.+.....
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 5789999999999999999999999999999998887665543
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0062 Score=49.50 Aligned_cols=113 Identities=15% Similarity=0.144 Sum_probs=67.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCChhH--HHHHHHHHHhcCCeEEEEEecCCCHHHHH--HH--H
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQRE--KL--I 68 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~--~~--~ 68 (202)
++.|+||+|.+|.+++..|+..+. .+++.+++++. ++... .|+.+..... .. .
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~--------------~Dl~d~~~~~~~~~~~~ 66 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVV--------------MELMDCAFPLLDGVVPT 66 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeE--------------eehhcccchhcCceecc
Confidence 478999999999999999998553 58899986542 22222 3333322100 00 0
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC--CCCeEEEecCCC
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVG 139 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~ 139 (202)
....+.+ ...|+||+.||.... +.+.+.+.++.|+. +++.+.+.+.+. ..+.++.+|...
T Consensus 67 ~~~~~~~-~~aDiVVitAG~~~~------~~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsNPv 128 (324)
T TIGR01758 67 HDPAVAF-TDVDVAILVGAFPRK------EGMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGNPA 128 (324)
T ss_pred CChHHHh-CCCCEEEEcCCCCCC------CCCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence 0112223 478999999997532 11235667777766 445555555554 356777777654
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0013 Score=41.09 Aligned_cols=32 Identities=28% Similarity=0.283 Sum_probs=21.7
Q ss_pred CEEEEecCCCchHHH--HHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHA--TVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a--~a~~l~~~g~~Vi~~~r~ 33 (202)
|++||+|+|+|.|++ |+..+ ..|+..+.+...
T Consensus 40 K~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE 73 (78)
T PF12242_consen 40 KKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE 73 (78)
T ss_dssp SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred ceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence 789999999999999 55444 567777776643
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0035 Score=53.12 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=45.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQRE 65 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~ 65 (202)
|+++|.|+ |.+|+++++.|.++|+.|++++++++..+...+. ..+.++..|.++.+.++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~ 59 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLR 59 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHH
Confidence 57899998 8999999999999999999999998876655431 13556667777655433
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0073 Score=48.56 Aligned_cols=73 Identities=25% Similarity=0.289 Sum_probs=49.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|+||++++|.++++.+...|.+|+.+.+++++.+.+ . ..+.+ ..+ |. ++.. +.+.+ . ..+|
T Consensus 164 ~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~---~~~~~-~~~--~~---~~~~---~~~~~-~-~~~d 228 (332)
T cd08259 164 DTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-K---ELGAD-YVI--DG---SKFS---EDVKK-L-GGAD 228 (332)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-H---HcCCc-EEE--ec---HHHH---HHHHh-c-cCCC
Confidence 3689999999999999999999999999999887665443 2 22321 111 21 1122 22222 2 3689
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++++++|.
T Consensus 229 ~v~~~~g~ 236 (332)
T cd08259 229 VVIELVGS 236 (332)
T ss_pred EEEECCCh
Confidence 99999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0024 Score=50.64 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=54.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.|++|++|+|..|.-..+.---+|++|+.++-.+++.+-+.+++.- +.- .|=.++ ++.+.+++..+..||
T Consensus 152 etvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGf---D~~---idyk~~----d~~~~L~~a~P~GID 221 (340)
T COG2130 152 ETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGF---DAG---IDYKAE----DFAQALKEACPKGID 221 (340)
T ss_pred CEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCC---cee---eecCcc----cHHHHHHHHCCCCeE
Confidence 4899999999999655544445799999999999888777766532 111 222222 344455555545799
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+.+-|.|.
T Consensus 222 vyfeNVGg 229 (340)
T COG2130 222 VYFENVGG 229 (340)
T ss_pred EEEEcCCc
Confidence 99999995
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.012 Score=41.44 Aligned_cols=78 Identities=13% Similarity=0.068 Sum_probs=55.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-----------------HHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-----------------REQ 63 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-----------------~~~ 63 (202)
+++++.|.+ .|.++|+.|.+.|+.|+.++.+++..+.+.+. .+.++..|+.+ +.+
T Consensus 18 ~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p~~~~y~~a~liysirpp~e 89 (134)
T PRK04148 18 KKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNPNLEIYKNAKLIYSIRPPRD 89 (134)
T ss_pred CEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCCCHHHHhcCCEEEEeCCCHH
Confidence 358899986 88889999999999999999998866555432 35677788877 334
Q ss_pred HHHHHHHHHHHhCCCccEEEEcCCC
Q 028868 64 REKLIETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 64 i~~~~~~~~~~~~~~id~vi~~ag~ 88 (202)
++..+-++.+.. +.|.+|..-+.
T Consensus 90 l~~~~~~la~~~--~~~~~i~~l~~ 112 (134)
T PRK04148 90 LQPFILELAKKI--NVPLIIKPLSG 112 (134)
T ss_pred HHHHHHHHHHHc--CCCEEEEcCCC
Confidence 555555555554 46777765553
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.036 Score=47.69 Aligned_cols=79 Identities=22% Similarity=0.207 Sum_probs=54.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-------------HHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-------------REQREKLI 68 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-------------~~~i~~~~ 68 (202)
+++|.|+ |.+|...++.+...|+.|++.++++++++.+.+ + +.+ ++..|..+ .+..+...
T Consensus 166 kVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-l---Ga~--~v~v~~~e~g~~~~gYa~~~s~~~~~~~~ 238 (511)
T TIGR00561 166 KVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-M---GAE--FLELDFKEEGGSGDGYAKVMSEEFIAAEM 238 (511)
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCe--EEeccccccccccccceeecCHHHHHHHH
Confidence 6899997 899999999999999999999999876554432 2 333 33334321 23334444
Q ss_pred HHHHHHhCCCccEEEEcCCC
Q 028868 69 ETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~ 88 (202)
+.+.+.. ...|++|+++-+
T Consensus 239 ~~~~e~~-~~~DIVI~Tali 257 (511)
T TIGR00561 239 ELFAAQA-KEVDIIITTALI 257 (511)
T ss_pred HHHHHHh-CCCCEEEECccc
Confidence 4444444 579999999954
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0086 Score=41.62 Aligned_cols=77 Identities=18% Similarity=0.252 Sum_probs=54.4
Q ss_pred CEEEEecCCCchHHHHHHHHHH-CCCEEE-EEeCCh----------------------hHHHHHHHHHHhcCCeEEEEEe
Q 028868 1 MTALVTGGTRGIGHATVEELAR-FGAIVH-TCSRNQ----------------------IELDARLHEWKNKGFKVTGSVC 56 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~-~g~~Vi-~~~r~~----------------------~~~~~~~~~~~~~~~~v~~~~~ 56 (202)
++++|.|++|-+|+.+++.+.+ .+.+++ .++|++ +.++..... .+ +-.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvI 72 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVI 72 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEE
Confidence 3689999999999999999999 577765 556665 122232222 22 456
Q ss_pred cCCCHHHHHHHHHHHHHHhCCCccEEEEcCCC
Q 028868 57 DLSSREQREKLIETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 57 Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag~ 88 (202)
|.|.++.+.+.++.+.++ ++.+|+-+.|+
T Consensus 73 DfT~p~~~~~~~~~~~~~---g~~~ViGTTG~ 101 (124)
T PF01113_consen 73 DFTNPDAVYDNLEYALKH---GVPLVIGTTGF 101 (124)
T ss_dssp EES-HHHHHHHHHHHHHH---T-EEEEE-SSS
T ss_pred EcCChHHhHHHHHHHHhC---CCCEEEECCCC
Confidence 999999999988888776 57889988885
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.023 Score=39.98 Aligned_cols=77 Identities=19% Similarity=0.324 Sum_probs=52.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhc--CCeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNK--GFKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~--~~~v~~~~~Dv 58 (202)
++++|.|+ |++|..+++.|+..|. ++.++|.+. .+.+.+.+.+.+. ..++..+..++
T Consensus 3 ~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 3 KRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp -EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 46888888 6999999999999998 788887641 2344445555433 56777887887
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 59 SSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 59 ~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
+++...++++ ..|++|.+..
T Consensus 82 -~~~~~~~~~~--------~~d~vi~~~d 101 (135)
T PF00899_consen 82 -DEENIEELLK--------DYDIVIDCVD 101 (135)
T ss_dssp -SHHHHHHHHH--------TSSEEEEESS
T ss_pred -cccccccccc--------CCCEEEEecC
Confidence 3344444442 4688888755
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.015 Score=49.21 Aligned_cols=114 Identities=14% Similarity=0.088 Sum_probs=75.1
Q ss_pred EEEEecCCCchHHHHHHHHHHC-------CC--EEEEEeCChhHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARF-------GA--IVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~-------g~--~Vi~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~i~~~~ 68 (202)
++.|+|++|.+|.++|-.|+.. |. +++++++++++++....++.+.. .++.+ ..| + .
T Consensus 102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~~--~-------y 171 (444)
T PLN00112 102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GID--P-------Y 171 (444)
T ss_pred EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ecC--C-------H
Confidence 4789999999999999999988 64 79999999999888887776532 11111 111 1 1
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc--CCCCeEEEecCCCC
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA--SGNGSIVFISSVGG 140 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~vsS~~~ 140 (202)
+.+ ..-|++|..+|... ++ ..+ =.+.++.|.. +++...+.+.+ ...+.|+.+|....
T Consensus 172 ----e~~-kdaDiVVitAG~pr-kp--G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsNPvD 230 (444)
T PLN00112 172 ----EVF-QDAEWALLIGAKPR-GP--GME---RADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGNPCN 230 (444)
T ss_pred ----HHh-CcCCEEEECCCCCC-CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCCcHH
Confidence 122 46899999999743 22 123 2345666665 44444444455 35678888877643
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.006 Score=50.03 Aligned_cols=78 Identities=18% Similarity=0.305 Sum_probs=49.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+.+||.||+||+|.+.++.....|+..++++++.++. ++..++ +.+.. .|-.+++- .+.+++..++++|
T Consensus 159 ~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~l~k~l---GAd~v---vdy~~~~~----~e~~kk~~~~~~D 227 (347)
T KOG1198|consen 159 KSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-ELVKKL---GADEV---VDYKDENV----VELIKKYTGKGVD 227 (347)
T ss_pred CeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-HHHHHc---CCcEe---ecCCCHHH----HHHHHhhcCCCcc
Confidence 4799999999999999888888894444444444443 333333 32222 35555333 3333332236899
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
+|+-++|..
T Consensus 228 vVlD~vg~~ 236 (347)
T KOG1198|consen 228 VVLDCVGGS 236 (347)
T ss_pred EEEECCCCC
Confidence 999999974
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0046 Score=45.92 Aligned_cols=43 Identities=21% Similarity=0.237 Sum_probs=35.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK 45 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~ 45 (202)
+|.|.|+ |.+|..+|..++..|++|.+.+++++.++...+.+.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~ 43 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIE 43 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHH
Confidence 4778898 899999999999999999999999988777666554
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.017 Score=42.09 Aligned_cols=85 Identities=15% Similarity=0.122 Sum_probs=57.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH-------HhcCCeEEEEEecCCCHHHHHHHHHH--H
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW-------KNKGFKVTGSVCDLSSREQREKLIET--V 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~-------~~~~~~v~~~~~Dv~~~~~i~~~~~~--~ 71 (202)
+++-+.|. |-+|..+|+.|++.|++|.+.+|++++.+++.++- .+.-....++..=+.+.+.+++++.. +
T Consensus 2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i 80 (163)
T PF03446_consen 2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI 80 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence 46778888 79999999999999999999999998887766431 00011235555667888888888887 5
Q ss_pred HHHhCCCccEEEEcCC
Q 028868 72 TSIFQGKLNILINNAA 87 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag 87 (202)
.... .+=+++|.+..
T Consensus 81 ~~~l-~~g~iiid~sT 95 (163)
T PF03446_consen 81 LAGL-RPGKIIIDMST 95 (163)
T ss_dssp GGGS--TTEEEEE-SS
T ss_pred hhcc-ccceEEEecCC
Confidence 5543 23455555444
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.012 Score=47.37 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=50.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|+||+|++|.++++.....|++|+.+++++++.+.+.+ + +.+. + .|-.+++..+ .+++..+..+|
T Consensus 145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~---Ga~~-v--i~~~~~~~~~----~v~~~~~~gvd 213 (329)
T cd08294 145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-L---GFDA-V--FNYKTVSLEE----ALKEAAPDGID 213 (329)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE-E--EeCCCccHHH----HHHHHCCCCcE
Confidence 368999999999999888888899999999988876655533 2 3322 1 2322222222 22222224589
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++.+.|
T Consensus 214 ~vld~~g 220 (329)
T cd08294 214 CYFDNVG 220 (329)
T ss_pred EEEECCC
Confidence 9998877
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.013 Score=46.94 Aligned_cols=44 Identities=18% Similarity=0.061 Sum_probs=35.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh---hHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---IELDARLHEWK 45 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~---~~~~~~~~~~~ 45 (202)
|+++|.|| ||-+++++-.|+.+|. +|.++.|++ ++.+.+.+.+.
T Consensus 125 k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~ 172 (288)
T PRK12749 125 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN 172 (288)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence 57999998 6779999999999997 899999995 46666666554
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.016 Score=43.90 Aligned_cols=32 Identities=22% Similarity=0.360 Sum_probs=28.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
++++|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus 22 ~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 22 SHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 36888887 7999999999999998 89999886
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0049 Score=49.78 Aligned_cols=116 Identities=16% Similarity=0.200 Sum_probs=69.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCCh--hHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQ--IELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVT 72 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~--~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~ 72 (202)
+++.|+|++|.+|..++..|+..|. .|+++++++ ++++....++.+. +... .+..+. + .+.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~--d----~~~-- 69 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISS--D----LSD-- 69 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECC--C----HHH--
Confidence 5789999999999999999999986 599999955 4554444443321 1111 111111 1 111
Q ss_pred HHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 73 SIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
+ ..-|++|.++|.... + ..+. .+.++.|+.-...+.+.+.+. ...+.++++++..
T Consensus 70 --l-~~aDiViitag~p~~-~--~~~r---~dl~~~n~~i~~~~~~~i~~~---~~~~~viv~~npv 124 (309)
T cd05294 70 --V-AGSDIVIITAGVPRK-E--GMSR---LDLAKKNAKIVKKYAKQIAEF---APDTKILVVTNPV 124 (309)
T ss_pred --h-CCCCEEEEecCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCch
Confidence 2 468999999997532 1 1232 244455655444444443322 2356788888754
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.029 Score=45.32 Aligned_cols=120 Identities=13% Similarity=0.070 Sum_probs=71.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
+++.|+|++|.+|.++|..|+..+. ++++++.+ +++....++.+........... .+ ++ +.+.+ ..
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~-------~y~~~-~d 68 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EE-------LKKAL-KG 68 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cc-------hHHhc-CC
Confidence 5789999999999999999998884 89999987 4444444444322111111110 00 01 11222 46
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
-|++|.+||.... + ..+ =.+.++.|..=.-.+.+.+.++ ...+.++++|.....
T Consensus 69 aDivvitaG~~~k-~--g~t---R~dll~~N~~i~~~i~~~i~~~---~p~a~vivvtNPvDv 122 (310)
T cd01337 69 ADVVVIPAGVPRK-P--GMT---RDDLFNINAGIVRDLATAVAKA---CPKALILIISNPVNS 122 (310)
T ss_pred CCEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEccCchhh
Confidence 8999999997532 2 123 2455667766555554444332 346788888887643
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.024 Score=46.36 Aligned_cols=32 Identities=31% Similarity=0.482 Sum_probs=29.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
++|+|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus 25 ~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 25 KHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 36899999 7999999999999998 89999986
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.039 Score=47.24 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=50.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|.|+ |++|.++|+.|.++|++|.+.+++.. ......+.+.+.+..+ ...+-.. .. ...
T Consensus 17 ~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~--~~~~~~~-------------~~-~~~ 79 (480)
T PRK01438 17 LRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATV--RLGPGPT-------------LP-EDT 79 (480)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEE--EECCCcc-------------cc-CCC
Confidence 57899997 78999999999999999999986543 3333445555545433 2222111 01 358
Q ss_pred cEEEEcCCCCCCC
Q 028868 80 NILINNAAIAFVK 92 (202)
Q Consensus 80 d~vi~~ag~~~~~ 92 (202)
|.||.++|+.+..
T Consensus 80 D~Vv~s~Gi~~~~ 92 (480)
T PRK01438 80 DLVVTSPGWRPDA 92 (480)
T ss_pred CEEEECCCcCCCC
Confidence 9999999986543
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.03 Score=43.13 Aligned_cols=77 Identities=19% Similarity=0.294 Sum_probs=49.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhcC--CeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNKG--FKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~~--~~v~~~~~Dv 58 (202)
++|+|.|+ ||+|.++|+.|+..|. ++.++|.+. .+.+.+.+.+.+.. .++..+..++
T Consensus 22 ~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~i 100 (228)
T cd00757 22 ARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNERL 100 (228)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEeccee
Confidence 36889987 7999999999999998 777776532 23444444554443 3455555555
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 59 SSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 59 ~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
+ .+++.+++ ...|+||.+..
T Consensus 101 ~-~~~~~~~~--------~~~DvVi~~~d 120 (228)
T cd00757 101 D-AENAEELI--------AGYDLVLDCTD 120 (228)
T ss_pred C-HHHHHHHH--------hCCCEEEEcCC
Confidence 3 23332222 34788888766
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.015 Score=47.22 Aligned_cols=118 Identities=11% Similarity=0.085 Sum_probs=68.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
+++.|+|| |.+|..++..++..| ..|++.+.+++.++....++.... ........+....+.+ . + ..-
T Consensus 6 ~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~-~~~~~~~~i~~~~d~~----~----l-~~A 74 (319)
T PTZ00117 6 KKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFS-TLVGSNINILGTNNYE----D----I-KDS 74 (319)
T ss_pred cEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhc-cccCCCeEEEeCCCHH----H----h-CCC
Confidence 46899997 899999999999998 689999998876554333332211 0000000111001111 1 1 357
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
|+||.++|..... ..+. .+.+..|. -+.+.+.+.|.+. ..+.++++|...
T Consensus 75 DiVVitag~~~~~---g~~r---~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~ 125 (319)
T PTZ00117 75 DVVVITAGVQRKE---EMTR---EDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL 125 (319)
T ss_pred CEEEECCCCCCCC---CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence 9999999975322 1232 34555666 3455555555543 345577777755
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.023 Score=47.18 Aligned_cols=77 Identities=18% Similarity=0.317 Sum_probs=49.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhcC--CeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN-------------------QIELDARLHEWKNKG--FKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~~--~~v~~~~~Dv 58 (202)
++|+|.|+ ||+|.++++.|+..|. ++.+++++ ..+.+.+.+.+.+.. .++..+...+
T Consensus 136 ~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~~ 214 (376)
T PRK08762 136 ARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQERV 214 (376)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 35788877 7999999999999998 89999887 234455555554433 3344444444
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 59 SSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 59 ~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
.+ +++.+++ ...|+||.+..
T Consensus 215 ~~-~~~~~~~--------~~~D~Vv~~~d 234 (376)
T PRK08762 215 TS-DNVEALL--------QDVDVVVDGAD 234 (376)
T ss_pred Ch-HHHHHHH--------hCCCEEEECCC
Confidence 32 2222222 24688888765
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.02 Score=48.20 Aligned_cols=43 Identities=21% Similarity=0.275 Sum_probs=36.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~ 44 (202)
++++|.|+ |.+|..+++.|...| .+|++.+|+.++.....+.+
T Consensus 181 ~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~ 224 (417)
T TIGR01035 181 KKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL 224 (417)
T ss_pred CEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 57899998 999999999999999 68999999988766555543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.01 Score=55.00 Aligned_cols=75 Identities=16% Similarity=0.178 Sum_probs=58.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-E-------------EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-I-------------VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREK 66 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~-------------Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~ 66 (202)
|.++|.|| |.+|+..++.|++... . |.+++++.++.+.+.+.+. ++..+.+|++|.+++.+
T Consensus 570 ~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~----~~~~v~lDv~D~e~L~~ 644 (1042)
T PLN02819 570 QNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE----NAEAVQLDVSDSESLLK 644 (1042)
T ss_pred CcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC----CCceEEeecCCHHHHHH
Confidence 56899998 8999999999997642 3 8888999877776665431 46788999999877666
Q ss_pred HHHHHHHHhCCCccEEEEcCCC
Q 028868 67 LIETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 67 ~~~~~~~~~~~~id~vi~~ag~ 88 (202)
+++ .+|+||.+...
T Consensus 645 ~v~--------~~DaVIsalP~ 658 (1042)
T PLN02819 645 YVS--------QVDVVISLLPA 658 (1042)
T ss_pred hhc--------CCCEEEECCCc
Confidence 544 37999998864
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.011 Score=50.22 Aligned_cols=77 Identities=23% Similarity=0.176 Sum_probs=52.7
Q ss_pred CEEEEecC----------------CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 028868 1 MTALVTGG----------------TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 1 k~~lItGa----------------s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i 64 (202)
|++|||+| ||-+|.++|+.+..+|++|.++.-... + .....+.++.++ +.
T Consensus 257 kkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~--------~~p~~v~~i~V~-----ta 322 (475)
T PRK13982 257 RRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-L--------ADPQGVKVIHVE-----SA 322 (475)
T ss_pred CEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-C--------CCCCCceEEEec-----CH
Confidence 56788876 578999999999999999998764321 1 122234444433 44
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCCCCCCC
Q 028868 65 EKLIETVTSIFQGKLNILINNAAIAFVKP 93 (202)
Q Consensus 65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~ 93 (202)
++.++.+.+.+ +.|++|++|.+..+++
T Consensus 323 ~eM~~av~~~~--~~Di~I~aAAVaDyrp 349 (475)
T PRK13982 323 RQMLAAVEAAL--PADIAIFAAAVADWRV 349 (475)
T ss_pred HHHHHHHHhhC--CCCEEEEeccccceee
Confidence 55566666665 3799999999986654
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0083 Score=50.85 Aligned_cols=75 Identities=17% Similarity=0.086 Sum_probs=55.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+.++|.|+ |.+|+.+++.|.++|+.|+++++++++.+...++ ..++.++..|.++.+.++++-- ...|
T Consensus 232 ~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~~-------~~a~ 299 (453)
T PRK09496 232 KRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEGI-------DEAD 299 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcCC-------ccCC
Confidence 46899999 8999999999999999999999998776665543 2346678889998766544321 3567
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.+|...+
T Consensus 300 ~vi~~~~ 306 (453)
T PRK09496 300 AFIALTN 306 (453)
T ss_pred EEEECCC
Confidence 7765444
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.022 Score=49.22 Aligned_cols=43 Identities=23% Similarity=0.322 Sum_probs=38.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~ 44 (202)
++++|.|+ |.+|..+++.|..+|+ +|+++.|+.++...+.+++
T Consensus 267 kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~ 310 (519)
T PLN00203 267 ARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF 310 (519)
T ss_pred CEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh
Confidence 57899999 9999999999999997 7999999998887777665
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.029 Score=41.36 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=28.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ 34 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~ 34 (202)
+++|.|+ ||+|..+++.|++.|. ++.+.|.+.
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3788887 7999999999999998 699998875
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.006 Score=52.25 Aligned_cols=43 Identities=23% Similarity=0.280 Sum_probs=37.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
|+++|+|+ ||+|++++..|.+.|++|++.+|+.++.+...+.+
T Consensus 333 k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~ 375 (477)
T PRK09310 333 QHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC 375 (477)
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence 57899996 79999999999999999999999987776665543
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.043 Score=38.94 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=27.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+++|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 4788998 8999999999999998 78888765
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.014 Score=46.44 Aligned_cols=77 Identities=21% Similarity=0.340 Sum_probs=50.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+++++|.++.+.+..+|++|+.+.+++++.+.+ .++ +.+.. .+..+.+....+... .. +..+|
T Consensus 141 ~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~~---~~~~~~~~~~~~~~~-~~--~~~~d 210 (325)
T TIGR02824 141 ETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EAL---GADIA---INYREEDFVEVVKAE-TG--GKGVD 210 (325)
T ss_pred CEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcEE---EecCchhHHHHHHHH-cC--CCCeE
Confidence 4789999999999999999999999999999987766533 322 32211 233332222222221 11 13599
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.+++++|
T Consensus 211 ~~i~~~~ 217 (325)
T TIGR02824 211 VILDIVG 217 (325)
T ss_pred EEEECCc
Confidence 9999887
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.031 Score=45.17 Aligned_cols=118 Identities=11% Similarity=0.036 Sum_probs=69.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++.|+|++|.+|.++|..|+..+. .+++.+.++ ......++.+...+.......-.+ + ..+.+ ..-
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~~~~--~-------~~~~~-~da 68 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFSGEE--G-------LENAL-KGA 68 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEecCCC--c-------hHHHc-CCC
Confidence 478999999999999999998875 799999876 222222333221111111101000 0 11223 468
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCc
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGV 141 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~ 141 (202)
|++|.++|.... + ..+ =.+.++.|+. +++...+.+.+. ..+.++++|.....
T Consensus 69 DivvitaG~~~~-~--g~~---R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvDv 121 (312)
T TIGR01772 69 DVVVIPAGVPRK-P--GMT---RDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVNS 121 (312)
T ss_pred CEEEEeCCCCCC-C--Ccc---HHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchhh
Confidence 999999997532 2 122 2345666766 445555544443 46778888887753
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.016 Score=46.84 Aligned_cols=69 Identities=16% Similarity=0.226 Sum_probs=49.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|.|+ |.+|..+++.|...|. +|++++|++++...+.+++. .. . .+.+++.+.+ ...
T Consensus 179 ~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g---~~--~-----~~~~~~~~~l--------~~a 239 (311)
T cd05213 179 KKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG---GN--A-----VPLDELLELL--------NEA 239 (311)
T ss_pred CEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC---Ce--E-----EeHHHHHHHH--------hcC
Confidence 47899988 8999999999998774 78899999888777766652 21 1 1222222222 246
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.+.+.
T Consensus 240 DvVi~at~~ 248 (311)
T cd05213 240 DVVISATGA 248 (311)
T ss_pred CEEEECCCC
Confidence 999998885
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.016 Score=47.64 Aligned_cols=115 Identities=11% Similarity=0.114 Sum_probs=71.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCC---eEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|+ |.+|.++|..++..+. ++++.+.+++++.....++.+... .. -+..+ .+ .+. +
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~d-------y~~----~ 103 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TD-------YAV----T 103 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CC-------HHH----h
Confidence 37899997 9999999999998875 799999998887777777665321 11 11111 11 111 2
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG 140 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 140 (202)
..-|++|.+||.... + ..+. .+.+..|.. +++.+.+.+.+. ..+.++++|....
T Consensus 104 -~daDiVVitAG~~~k-~--g~tR---~dll~~N~~----I~~~i~~~I~~~~p~~ivivvtNPvd 158 (350)
T PLN02602 104 -AGSDLCIVTAGARQI-P--GESR---LNLLQRNVA----LFRKIIPELAKYSPDTILLIVSNPVD 158 (350)
T ss_pred -CCCCEEEECCCCCCC-c--CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCchH
Confidence 467999999997532 2 1232 244555554 444444444443 4577777776543
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.1 Score=42.19 Aligned_cols=116 Identities=12% Similarity=0.133 Sum_probs=73.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC-----CeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG-----FKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~-----~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
++.|.|+ |.+|.++|..|+.++. ++++.+.++++.+....++.+.. .++..... + .+.
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~-------y~~---- 65 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D-------YDD---- 65 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C-------HHH----
Confidence 3678898 9999999999998875 79999999888777777776531 12333222 2 122
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCc
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGV 141 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~ 141 (202)
+ ..-|++|.+||.... | ..+.+ =.+.++.|.. +++...|.+.+. ..+.++.+|.....
T Consensus 66 ~-~~aDivvitaG~~~k-p--g~tr~-R~dll~~N~~----I~~~i~~~i~~~~p~~i~ivvsNPvDv 124 (307)
T cd05290 66 C-ADADIIVITAGPSID-P--GNTDD-RLDLAQTNAK----IIREIMGNITKVTKEAVIILITNPLDI 124 (307)
T ss_pred h-CCCCEEEECCCCCCC-C--CCCch-HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEecCcHHH
Confidence 2 467999999997532 2 12210 1234555554 555555555544 45677777776543
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.017 Score=48.74 Aligned_cols=43 Identities=21% Similarity=0.313 Sum_probs=36.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~ 44 (202)
++++|.|+ |.+|..+++.|...|. +|++++|++++...+.+++
T Consensus 183 ~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~ 226 (423)
T PRK00045 183 KKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF 226 (423)
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence 57899988 8999999999999997 8999999988876665554
|
|
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.021 Score=46.91 Aligned_cols=102 Identities=19% Similarity=0.222 Sum_probs=63.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-Cc
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL 79 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~i 79 (202)
+++|+|+ |.||+-.+..+...|+ +|+++++++++++.+.+... .+... +...+ .....+.+..++ ..
T Consensus 171 ~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g---~~~~~---~~~~~----~~~~~~~~~t~g~g~ 239 (350)
T COG1063 171 TVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGG---ADVVV---NPSED----DAGAEILELTGGRGA 239 (350)
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCC---CeEee---cCccc----cHHHHHHHHhCCCCC
Confidence 5888888 7999999777778887 78888999988887765432 12211 11111 222233233223 69
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
|.+|-++|... .+..++...+ +.|++++++-....
T Consensus 240 D~vie~~G~~~-------------------------~~~~ai~~~r--~gG~v~~vGv~~~~ 274 (350)
T COG1063 240 DVVIEAVGSPP-------------------------ALDQALEALR--PGGTVVVVGVYGGE 274 (350)
T ss_pred CEEEECCCCHH-------------------------HHHHHHHHhc--CCCEEEEEeccCCc
Confidence 99999999211 2233333333 46899998776544
|
|
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.02 Score=45.69 Aligned_cols=78 Identities=15% Similarity=0.193 Sum_probs=50.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+++++|.++++.+..+|++|+.++++.++.+.+ .++ +.+ .++ |.......+.+. +... +..+|
T Consensus 146 ~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~---g~~-~~~--~~~~~~~~~~~~-~~~~--~~~~d 215 (328)
T cd08268 146 DSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LAL---GAA-HVI--VTDEEDLVAEVL-RITG--GKGVD 215 (328)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHc---CCC-EEE--ecCCccHHHHHH-HHhC--CCCce
Confidence 3689999999999999999999999999999987766554 222 221 122 222222222222 2211 13599
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
.++++.|.
T Consensus 216 ~vi~~~~~ 223 (328)
T cd08268 216 VVFDPVGG 223 (328)
T ss_pred EEEECCch
Confidence 99998873
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.035 Score=46.41 Aligned_cols=44 Identities=18% Similarity=0.244 Sum_probs=39.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWK 45 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~ 45 (202)
|+++|.|| |-+|.-+|++|+++|. +|+++.|+.++...+.+++.
T Consensus 179 ~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~ 223 (414)
T COG0373 179 KKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG 223 (414)
T ss_pred CeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence 57999999 6899999999999995 88999999999888887764
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.061 Score=43.55 Aligned_cols=115 Identities=10% Similarity=0.026 Sum_probs=72.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCC---eEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|+ |.+|.++|..|+..|. .+++++.+++++.....++.+... ...+... .+. +. +
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy-------~~----~ 69 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY-------SV----T 69 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH-------HH----h
Confidence 46889997 9999999999998875 799999998877777777765321 1111111 111 11 2
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG 140 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 140 (202)
..-|++|.++|.... + ..+. .+.+..|.. +++.+.+.+.+. ..+.++++|....
T Consensus 70 -~~adivvitaG~~~k-~--g~~R---~dll~~N~~----i~~~~~~~i~~~~p~~~vivvsNP~d 124 (312)
T cd05293 70 -ANSKVVIVTAGARQN-E--GESR---LDLVQRNVD----IFKGIIPKLVKYSPNAILLVVSNPVD 124 (312)
T ss_pred -CCCCEEEECCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCcEEEEccChHH
Confidence 467999999997543 2 2333 334556655 344444444443 4677888877554
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.045 Score=41.72 Aligned_cols=32 Identities=22% Similarity=0.322 Sum_probs=28.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
++++|.|+ ||+|..+++.|+..|. ++.+.|.+
T Consensus 29 ~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 29 AKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 35889997 7999999999999998 68898887
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.02 Score=46.02 Aligned_cols=38 Identities=26% Similarity=0.273 Sum_probs=33.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA 39 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~ 39 (202)
++++|.|+ |++|+.+++.|...|++|.+.+|++++.+.
T Consensus 153 ~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~ 190 (296)
T PRK08306 153 SNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR 190 (296)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 57999998 689999999999999999999999765433
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.063 Score=41.89 Aligned_cols=32 Identities=28% Similarity=0.343 Sum_probs=28.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 33 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 33 ARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 46899999 8999999999999997 78887764
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.041 Score=44.83 Aligned_cols=71 Identities=23% Similarity=0.274 Sum_probs=48.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+.++|+|++ |+|....+.....|++|+..+|++++++.+.+. +.+..+ |-+|++..+.+.+ ..|
T Consensus 168 ~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l----GAd~~i---~~~~~~~~~~~~~--------~~d 231 (339)
T COG1064 168 KWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL----GADHVI---NSSDSDALEAVKE--------IAD 231 (339)
T ss_pred CEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh----CCcEEE---EcCCchhhHHhHh--------hCc
Confidence 468999998 999766666666999999999999888776543 333333 2223333333322 269
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
++|.+++
T Consensus 232 ~ii~tv~ 238 (339)
T COG1064 232 AIIDTVG 238 (339)
T ss_pred EEEECCC
Confidence 9999888
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.06 Score=43.33 Aligned_cols=116 Identities=12% Similarity=0.071 Sum_probs=70.4
Q ss_pred EEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 3 ALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+.|.|+ |++|.++|..|+..| .++++.+.++++++....++.+............++. .+. + ..-|
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~------~~~----l-~~aD 68 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGD------YAD----A-ADAD 68 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCC------HHH----h-CCCC
Confidence 357887 689999999999988 5899999999888887777765422100001111110 112 2 4679
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG 140 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 140 (202)
++|.++|.... + ..+. .+.+..|+. +++.+.+.+++. ..+.++++|....
T Consensus 69 iVIitag~p~~-~--~~~R---~~l~~~n~~----i~~~~~~~i~~~~p~~~viv~sNP~d 119 (300)
T cd00300 69 IVVITAGAPRK-P--GETR---LDLINRNAP----ILRSVITNLKKYGPDAIILVVSNPVD 119 (300)
T ss_pred EEEEcCCCCCC-C--CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccChHH
Confidence 99999997532 1 1222 234445544 444444444543 4677777776553
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.0091 Score=42.82 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=34.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK 45 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~ 45 (202)
|+.+|+++-+|+++|..|+++|.+|+.. +.+..+.+..++.
T Consensus 1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~ 41 (164)
T PF12076_consen 1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP 41 (164)
T ss_pred CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence 5889999999999999999999999998 5555666665554
|
This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases []. |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.012 Score=51.53 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=53.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
++|.|+ |.+|++++++|.++|.+|+++++++++.+...+ . +...+..|.+|++.++++-- .+.|.+
T Consensus 420 iiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~--g~~~i~GD~~~~~~L~~a~i-------~~a~~v 485 (558)
T PRK10669 420 ALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----R--GIRAVLGNAANEEIMQLAHL-------DCARWL 485 (558)
T ss_pred EEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----C--CCeEEEcCCCCHHHHHhcCc-------cccCEE
Confidence 577777 699999999999999999999999887666542 1 47788899999777554321 256766
Q ss_pred EEcCC
Q 028868 83 INNAA 87 (202)
Q Consensus 83 i~~ag 87 (202)
+-..+
T Consensus 486 iv~~~ 490 (558)
T PRK10669 486 LLTIP 490 (558)
T ss_pred EEEcC
Confidence 65444
|
|
| >PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.029 Score=47.61 Aligned_cols=76 Identities=18% Similarity=0.101 Sum_probs=48.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+|.+ ++|.++|+.|+++|++|.+.+...... ...+++.....+.+...+..+ . .+ ...|
T Consensus 6 ~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~~-~-----------~~-~~~d 69 (445)
T PRK04308 6 KKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLKD-A-----------LD-NGFD 69 (445)
T ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCCH-H-----------HH-hCCC
Confidence 579999985 999999999999999999998765321 122333211123333322111 1 11 3579
Q ss_pred EEEEcCCCCCCC
Q 028868 81 ILINNAAIAFVK 92 (202)
Q Consensus 81 ~vi~~ag~~~~~ 92 (202)
.||.++|+.+..
T Consensus 70 ~vv~spgi~~~~ 81 (445)
T PRK04308 70 ILALSPGISERQ 81 (445)
T ss_pred EEEECCCCCCCC
Confidence 999999987543
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.15 Score=41.14 Aligned_cols=114 Identities=10% Similarity=0.037 Sum_probs=68.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|.|+ |.+|.++|..|+.+| ..|+++++++++.+.....+.+.. ..... .. .+. +. +
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i-~~--~d~-------~~----l 65 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRI-YA--GDY-------AD----C 65 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEE-ee--CCH-------HH----h
Confidence 46889998 899999999999999 589999999887765555554321 11111 11 111 11 2
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
..-|++|.++|..... ..+ ..+.+..|..-.-.+.+.+.. ....+.++.++...
T Consensus 66 -~~aDiViita~~~~~~---~~~---r~dl~~~n~~i~~~~~~~l~~---~~~~giiiv~tNP~ 119 (308)
T cd05292 66 -KGADVVVITAGANQKP---GET---RLDLLKRNVAIFKEIIPQILK---YAPDAILLVVTNPV 119 (308)
T ss_pred -CCCCEEEEccCCCCCC---CCC---HHHHHHHHHHHHHHHHHHHHH---HCCCeEEEEecCcH
Confidence 4689999999975321 112 234455555533333333322 22457777776544
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.012 Score=43.11 Aligned_cols=35 Identities=20% Similarity=0.273 Sum_probs=30.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
|+++|+|++.-+|..+++.|.++|++|.++.|+.+
T Consensus 45 k~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~ 79 (168)
T cd01080 45 KKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK 79 (168)
T ss_pred CEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch
Confidence 68999999655799999999999999999998853
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.011 Score=50.10 Aligned_cols=40 Identities=25% Similarity=0.247 Sum_probs=35.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
|++.|+||.|.+|.++++.|.+.|++|.+.+|+++.....
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~ 40 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV 40 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence 5789999999999999999999999999999998765443
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.055 Score=43.99 Aligned_cols=117 Identities=14% Similarity=0.135 Sum_probs=69.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVT 72 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~ 72 (202)
++.|+||+|.+|.+++..|+..|. .+++.+.++ ++++....++.+.... .. -+.. +. ..-.
T Consensus 5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~--~~-~~~~----i~---~~~~ 74 (323)
T TIGR01759 5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP--LL-AGVV----AT---TDPE 74 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcccc--cc-CCcE----Ee---cChH
Confidence 578999999999999999998874 799999865 4466666565543210 00 0110 00 0001
Q ss_pred HHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-C-CCeEEEecCCC
Q 028868 73 SIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-G-NGSIVFISSVG 139 (202)
Q Consensus 73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~~~iv~vsS~~ 139 (202)
+.+ ..-|+||.+||... ++ ..+ =.+.++.|.. +++.+.+.+.+. . .+.++.+|...
T Consensus 75 ~~~-~daDvVVitAG~~~-k~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsNPv 132 (323)
T TIGR01759 75 EAF-KDVDAALLVGAFPR-KP--GME---RADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVGNPA 132 (323)
T ss_pred HHh-CCCCEEEEeCCCCC-CC--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence 122 46799999999753 22 123 2345566665 444445544544 2 56777776544
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.06 Score=44.81 Aligned_cols=113 Identities=14% Similarity=0.095 Sum_probs=70.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-E----EEE----EeCChhHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-I----VHT----CSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~----Vi~----~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~i~~~~ 68 (202)
++.|+||+|.+|.++|-.++..|. . |.+ .+.++++++....++.+.. .++.+. .| + .
T Consensus 46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~-~~--~-------y 115 (387)
T TIGR01757 46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIG-ID--P-------Y 115 (387)
T ss_pred EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEe-cC--C-------H
Confidence 488999999999999999998874 3 343 4888888877777776432 111111 11 1 1
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-C-CCCeEEEecCCC
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-S-GNGSIVFISSVG 139 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~~iv~vsS~~ 139 (202)
+.+ .+-|++|..||... ++ ..+ =.+.++.|.. +++...+.+.+ . ..+.++.+|...
T Consensus 116 ----~~~-kdaDIVVitAG~pr-kp--g~t---R~dll~~N~~----I~k~i~~~I~~~a~~~~iviVVsNPv 173 (387)
T TIGR01757 116 ----EVF-EDADWALLIGAKPR-GP--GME---RADLLDINGQ----IFADQGKALNAVASKNCKVLVVGNPC 173 (387)
T ss_pred ----HHh-CCCCEEEECCCCCC-CC--CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEcCCcH
Confidence 122 46899999999753 22 123 2345566665 44444444454 3 457788877655
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.1 Score=41.89 Aligned_cols=83 Identities=17% Similarity=0.191 Sum_probs=55.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH----------HHhc--CCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----------WKNK--GFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~----------~~~~--~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|++-|.|. |-+|.++++.|++.|++|++.+|++++.+.+.+. +.+. ..++.++. +.+. .+++++
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~~s~~~~~~~~~~~dvIi~~--vp~~-~~~~v~ 76 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGVANLRELSQRLSAPRVVWVM--VPHG-IVDAVL 76 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCcccCCHHHHHhhcCCCCEEEEE--cCch-HHHHHH
Confidence 46778886 7999999999999999999999998877665432 1110 12333332 3344 667777
Q ss_pred HHHHHHhCCCccEEEEcCCC
Q 028868 69 ETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~ 88 (202)
+.+.... .+=+++|+....
T Consensus 77 ~~l~~~l-~~g~ivid~st~ 95 (298)
T TIGR00872 77 EELAPTL-EKGDIVIDGGNS 95 (298)
T ss_pred HHHHhhC-CCCCEEEECCCC
Confidence 7776654 233677776554
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.088 Score=43.43 Aligned_cols=32 Identities=22% Similarity=0.328 Sum_probs=28.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
++|+|.|+ ||+|.++++.|+..|. ++.+++.+
T Consensus 29 ~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D 61 (355)
T PRK05597 29 AKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD 61 (355)
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 46899998 7999999999999998 78888775
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.04 Score=44.41 Aligned_cols=74 Identities=15% Similarity=0.128 Sum_probs=46.9
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCccE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKLNI 81 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~id~ 81 (202)
++++||+|++|...++.....|++|+.+++++++.+.+.+ .+.+. ++ |..+.+..+ .+.+..+ ..+|+
T Consensus 147 lv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~----~g~~~-~i--~~~~~~~~~----~v~~~~~~~~~d~ 215 (324)
T cd08291 147 VVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK----IGAEY-VL--NSSDPDFLE----DLKELIAKLNATI 215 (324)
T ss_pred EEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCcE-EE--ECCCccHHH----HHHHHhCCCCCcE
Confidence 4445999999999988777789999999998877655533 23322 22 222222222 2222222 36999
Q ss_pred EEEcCC
Q 028868 82 LINNAA 87 (202)
Q Consensus 82 vi~~ag 87 (202)
++.+.|
T Consensus 216 vid~~g 221 (324)
T cd08291 216 FFDAVG 221 (324)
T ss_pred EEECCC
Confidence 999887
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.037 Score=45.03 Aligned_cols=114 Identities=13% Similarity=0.100 Sum_probs=69.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQ--IELDARLHEWKNKG----FKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~i~~~ 67 (202)
+++.|+||+|.+|.++|..|+..|. .+++.+.++ ++++....++.+.. .++.+ ..+
T Consensus 5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~~---------- 73 (326)
T PRK05442 5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TDD---------- 73 (326)
T ss_pred cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ecC----------
Confidence 4689999999999999999998764 689999854 33444444444321 11111 110
Q ss_pred HHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-C-CCCeEEEecCCC
Q 028868 68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-S-GNGSIVFISSVG 139 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~~iv~vsS~~ 139 (202)
..+.+ ..-|++|.+||.... + ..+ =.+.++.|.. +++.+.+.+.+ . ..+.++.+|...
T Consensus 74 ---~y~~~-~daDiVVitaG~~~k-~--g~t---R~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsNPv 133 (326)
T PRK05442 74 ---PNVAF-KDADVALLVGARPRG-P--GME---RKDLLEANGA----IFTAQGKALNEVAARDVKVLVVGNPA 133 (326)
T ss_pred ---hHHHh-CCCCEEEEeCCCCCC-C--CCc---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 11222 468999999997432 2 122 2445556655 45555555565 3 357777777654
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.032 Score=45.23 Aligned_cols=76 Identities=18% Similarity=0.211 Sum_probs=49.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|+|+ |++|...++.+...|++ |+++++++++.+.+ .++ +.+.. .|..+.+ .+++.+ +.. +..+
T Consensus 165 ~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~-~~~~~~-~~~--~~~~ 232 (339)
T cd08239 165 DTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KAL---GADFV---INSGQDD-VQEIRE-LTS--GAGA 232 (339)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---EcCCcch-HHHHHH-HhC--CCCC
Confidence 36899986 89999999988889998 99999988776554 333 32211 2333333 322222 111 1369
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+++.+.|.
T Consensus 233 d~vid~~g~ 241 (339)
T cd08239 233 DVAIECSGN 241 (339)
T ss_pred CEEEECCCC
Confidence 999998884
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.044 Score=44.67 Aligned_cols=74 Identities=15% Similarity=0.169 Sum_probs=48.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ |.+.. .|-.+ +++.+.. +.. +.+
T Consensus 171 ~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~-~~~~~~~----~~~-g~~ 236 (343)
T PRK09880 171 KRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EM---GADKL---VNPQN-DDLDHYK----AEK-GYF 236 (343)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-Hc---CCcEE---ecCCc-ccHHHHh----ccC-CCC
Confidence 46899986 8999999988888898 6888999987775543 23 43322 23332 2222222 222 469
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.++|.
T Consensus 237 D~vid~~G~ 245 (343)
T PRK09880 237 DVSFEVSGH 245 (343)
T ss_pred CEEEECCCC
Confidence 999999983
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.075 Score=42.86 Aligned_cols=116 Identities=12% Similarity=0.111 Sum_probs=72.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+|| |++|.++|..|+.++. .+++.+..+++.+....++.+.. .+ ..+..| .+ .+.
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~-~~i~~~-~~-------y~~---- 66 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSD-VKITGD-GD-------YED---- 66 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCc-eEEecC-CC-------hhh----
Confidence 57899999 9999999999988764 79999999777777666665431 11 111122 11 111
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCc
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGV 141 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~ 141 (202)
+ ..-|+++..||...... ++. .+.++.|..=.-.+.+ .+.+. ..+.++.++.....
T Consensus 67 ~-~~aDiVvitAG~prKpG---mtR---~DLl~~Na~I~~~i~~----~i~~~~~d~ivlVvtNPvD~ 123 (313)
T COG0039 67 L-KGADIVVITAGVPRKPG---MTR---LDLLEKNAKIVKDIAK----AIAKYAPDAIVLVVTNPVDI 123 (313)
T ss_pred h-cCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHH----HHHhhCCCeEEEEecCcHHH
Confidence 1 36899999999754322 232 3455666653333333 33433 35677777776543
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.017 Score=45.81 Aligned_cols=43 Identities=19% Similarity=0.196 Sum_probs=37.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~ 44 (202)
|+++|.|+ ||-+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus 123 ~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~ 166 (272)
T PRK12550 123 LVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY 166 (272)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence 46889997 8999999999999998 6999999998887766553
|
|
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.052 Score=44.40 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=34.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
.+++|.|+ |++|...++.+...|.+|+++++++++++.+
T Consensus 168 ~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~ 206 (349)
T TIGR03201 168 DLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM 206 (349)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH
Confidence 37899999 9999999988888999999999998877655
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.091 Score=39.69 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=29.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
++++|.|+ ||+|..+|+.|++.|. ++++.|++
T Consensus 22 ~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 22 ATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 46899999 7999999999999999 79999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.016 Score=46.39 Aligned_cols=38 Identities=21% Similarity=0.290 Sum_probs=33.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA 39 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~ 39 (202)
|+++|+|. |++|+++|+.|...|++|.+.+|++++.+.
T Consensus 152 k~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~ 189 (287)
T TIGR02853 152 SNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR 189 (287)
T ss_pred CEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 57999999 689999999999999999999999876544
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.095 Score=40.77 Aligned_cols=31 Identities=26% Similarity=0.319 Sum_probs=27.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 26 ~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 26 RVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred cEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 5788888 6999999999999997 78888875
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.045 Score=43.83 Aligned_cols=75 Identities=17% Similarity=0.288 Sum_probs=50.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~id 80 (202)
+++|+|+++++|.++++.+..+|++|+.+++++++.+.+ +++ +.+. . .|..+.+..+.+ .+..+ ..+|
T Consensus 145 ~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-~--~~~~~~~~~~~~----~~~~~~~~~d 213 (324)
T cd08244 145 VVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RAL---GADV-A--VDYTRPDWPDQV----REALGGGGVT 213 (324)
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHc---CCCE-E--EecCCccHHHHH----HHHcCCCCce
Confidence 689999999999999999999999999999988766544 332 3221 1 233333222222 22222 3599
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++++.|
T Consensus 214 ~vl~~~g 220 (324)
T cd08244 214 VVLDGVG 220 (324)
T ss_pred EEEECCC
Confidence 9999877
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >COG3007 Uncharacterized paraquat-inducible protein B [Function unknown] | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.5 Score=37.68 Aligned_cols=169 Identities=20% Similarity=0.144 Sum_probs=96.0
Q ss_pred CEEEEecCCCchHHHHHHHHH-HCCCEEEEEe--C-----Chh-----HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELA-RFGAIVHTCS--R-----NQI-----ELDARLHEWKNKGFKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~-~~g~~Vi~~~--r-----~~~-----~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~ 67 (202)
|++||.|+|+|.|++.=...+ .-|+.-+.+. | .+- ......+.-.+.|.-..-+..|.=..+--+..
T Consensus 42 KkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~kv 121 (398)
T COG3007 42 KKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQKV 121 (398)
T ss_pred ceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHHHH
Confidence 689999999999988533333 1344444332 1 110 11122222233455556677788777777888
Q ss_pred HHHHHHHhCCCccEEEEcCCCCCCC-C------------C---------------------CCCCHHHHHHHHHHHhHhH
Q 028868 68 IETVTSIFQGKLNILINNAAIAFVK-P------------T---------------------VDITAEDMSTVSSTNFESV 113 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~-~------------~---------------------~~~~~~~~~~~~~~n~~~~ 113 (202)
.+.+++.| +++|.+|++-+....+ | + +..+.++++.+..+.=---
T Consensus 122 Ie~Ik~~~-g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGeD 200 (398)
T COG3007 122 IEAIKQDF-GKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGED 200 (398)
T ss_pred HHHHHHhh-ccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcch
Confidence 99999999 6999999987643211 1 0 1124445554443321111
Q ss_pred H-HHHHHHhH--HHhcCCCCeEEEecCCCCcc--CCCCChhhhhhHHHHHHHHHHHHHHHccCC
Q 028868 114 F-HLSQLAHP--LFKASGNGSIVFISSVGGVR--GIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172 (202)
Q Consensus 114 ~-~~~~~~~~--~~~~~~~~~iv~vsS~~~~~--~~~~~~~y~asK~a~~~~~~~la~e~~~~g 172 (202)
+ .++.+++. .+. .+.+-+..|-+..-. +....+..+.+|.=++.-++.+...++..|
T Consensus 201 Wq~WidaLl~advla--eg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~g 262 (398)
T COG3007 201 WQMWIDALLEADVLA--EGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALG 262 (398)
T ss_pred HHHHHHHHHhccccc--cCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcC
Confidence 1 23333321 222 233444444444333 333456789999999999999999987654
|
|
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.04 Score=43.72 Aligned_cols=40 Identities=30% Similarity=0.382 Sum_probs=34.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
++++|+|+++++|.+++..+...|++|+.++++.++.+.+
T Consensus 141 ~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (323)
T cd08241 141 ETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA 180 (323)
T ss_pred CEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence 3689999999999999999999999999999887665544
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.063 Score=42.78 Aligned_cols=32 Identities=22% Similarity=0.322 Sum_probs=28.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ 34 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~ 34 (202)
+|+|.|+ ||+|..+++.|+..|. ++.++|.+.
T Consensus 29 ~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 29 RVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred CEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5889988 6999999999999998 788888763
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.037 Score=44.39 Aligned_cols=76 Identities=9% Similarity=0.037 Sum_probs=50.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~id 80 (202)
+++|.|+++++|.++++....+|++|+.+.++.++.+.+.+ + +.+ .++ +-.+. +..+ ++.+..+ ..+|
T Consensus 142 ~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~-~---g~~-~~~--~~~~~-~~~~---~i~~~~~~~~~d 210 (324)
T cd08292 142 WLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA-L---GIG-PVV--STEQP-GWQD---KVREAAGGAPIS 210 (324)
T ss_pred EEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh-c---CCC-EEE--cCCCc-hHHH---HHHHHhCCCCCc
Confidence 68999999999999999999999999999888776555432 2 322 121 22222 2222 2222222 3699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++.+.|.
T Consensus 211 ~v~d~~g~ 218 (324)
T cd08292 211 VALDSVGG 218 (324)
T ss_pred EEEECCCC
Confidence 99998873
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.079 Score=41.05 Aligned_cols=32 Identities=28% Similarity=0.499 Sum_probs=27.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ 34 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~ 34 (202)
+++|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~ 33 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDT 33 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3678886 7999999999999998 788888753
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.065 Score=37.01 Aligned_cols=66 Identities=20% Similarity=0.376 Sum_probs=45.7
Q ss_pred chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-CccEEEEcCC
Q 028868 11 GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KLNILINNAA 87 (202)
Q Consensus 11 giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~id~vi~~ag 87 (202)
|||...++.+...|++|+++++++++.+.+. +.+.+.. .|-.+.+ +.+++++..++ .+|++|.++|
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~----~~Ga~~~---~~~~~~~----~~~~i~~~~~~~~~d~vid~~g 67 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK----ELGADHV---IDYSDDD----FVEQIRELTGGRGVDVVIDCVG 67 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTTESEE---EETTTSS----HHHHHHHHTTTSSEEEEEESSS
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH----hhccccc---ccccccc----cccccccccccccceEEEEecC
Confidence 6898888888889999999999988765543 2332222 3433333 45555555543 6999999999
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.042 Score=44.10 Aligned_cols=39 Identities=33% Similarity=0.398 Sum_probs=34.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
+++|.|+++++|.++++....+|++|+.+++++++.+.+
T Consensus 149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (326)
T cd08289 149 PVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL 187 (326)
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence 789999999999999998889999999999998776555
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.2 Score=38.33 Aligned_cols=120 Identities=15% Similarity=0.115 Sum_probs=66.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++|-.|++.|. ++..+++.+. +|+.++.+++.++.+.+.+...+.++.++..|+.+ .+. ....|
T Consensus 39 ~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~------~~~------~~~fD 103 (223)
T PRK14967 39 RVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWAR------AVE------FRPFD 103 (223)
T ss_pred eEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhh------hcc------CCCee
Confidence 46777776543 3445566676 89999999988776666555445567777767543 111 14689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHH---HhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSST---NFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~---n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
.|+.|+......... .........+.. .....-.+++.+.++++. +|+++++.+..
T Consensus 104 ~Vi~npPy~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~--gG~l~~~~~~~ 162 (223)
T PRK14967 104 VVVSNPPYVPAPPDA-PPSRGPARAWDAGPDGRAVLDRLCDAAPALLAP--GGSLLLVQSEL 162 (223)
T ss_pred EEEECCCCCCCCccc-ccccChhHhhhCCCcHHHHHHHHHHHHHHhcCC--CcEEEEEEecc
Confidence 999998754322110 000001111111 011123455566666654 67888766543
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.04 Score=44.38 Aligned_cols=114 Identities=9% Similarity=0.047 Sum_probs=66.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCC----eEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGF----KVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~----~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|+ |.+|..+|..++..|. +|++.++++++++....++.+... ... +.. -++ .+. +
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d-------~~~----~ 68 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TND-------YED----I 68 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCC-------HHH----H
Confidence 47899999 8999999999999875 999999988876554444332211 111 111 011 111 2
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
..-|++|.++|.... + ..+. .+.+..|+. +.+.+.+.+.+. ..+.+++++...
T Consensus 69 -~~aDiVii~~~~p~~-~--~~~r---~~~~~~n~~----i~~~i~~~i~~~~~~~~viv~tNP~ 122 (307)
T PRK06223 69 -AGSDVVVITAGVPRK-P--GMSR---DDLLGINAK----IMKDVAEGIKKYAPDAIVIVVTNPV 122 (307)
T ss_pred -CCCCEEEECCCCCCC-c--CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcH
Confidence 467999999996432 1 1222 233344543 334444444433 345677776654
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.47 Score=38.57 Aligned_cols=120 Identities=11% Similarity=0.003 Sum_probs=68.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|| |.+|..+|..++..|. .|++.+.+++......-.+.+. +....+... +| .+. +
T Consensus 7 ~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d-------~~~----l 72 (321)
T PTZ00082 7 RKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN-------YED----I 72 (321)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC-------HHH----h
Confidence 46889995 8899999999999995 8999999987653322222211 112222111 12 111 2
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG 140 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 140 (202)
..-|+||.++|........+.+++. .+.+..|+. +.+.+.+.+.+. ..+.++++|....
T Consensus 73 -~~aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~~----i~~~i~~~i~~~~p~a~~iv~sNP~d 132 (321)
T PTZ00082 73 -AGSDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNAK----IMDEVAEGIKKYCPNAFVIVITNPLD 132 (321)
T ss_pred -CCCCEEEECCCCCCCCCCCcCCCCH-HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecCcHH
Confidence 3679999999976432111111121 344555643 455555555544 3457777777653
|
|
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.057 Score=45.27 Aligned_cols=82 Identities=9% Similarity=0.101 Sum_probs=49.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++|.|++|++|...++.+...|. +|+++++++++++.+.+.+... +.+..++ |-.+.++..+.+.++..
T Consensus 178 ~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i--~~~~~~~~~~~v~~~t~- 254 (410)
T cd08238 178 NTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYV--NPATIDDLHATLMELTG- 254 (410)
T ss_pred EEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEE--CCCccccHHHHHHHHhC-
Confidence 689999999999998776666554 7999999998877665432111 2222222 32221223222222211
Q ss_pred hCCCccEEEEcCC
Q 028868 75 FQGKLNILINNAA 87 (202)
Q Consensus 75 ~~~~id~vi~~ag 87 (202)
+..+|.+|.+.|
T Consensus 255 -g~g~D~vid~~g 266 (410)
T cd08238 255 -GQGFDDVFVFVP 266 (410)
T ss_pred -CCCCCEEEEcCC
Confidence 135899998876
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.022 Score=45.90 Aligned_cols=40 Identities=23% Similarity=0.148 Sum_probs=34.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
+++.|+| .|-+|.++|..|+++|++|++.+++++..+...
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~ 42 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAP 42 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHH
Confidence 4688999 579999999999999999999999987766543
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.067 Score=43.25 Aligned_cols=31 Identities=29% Similarity=0.446 Sum_probs=27.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D 32 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD 32 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 4788897 7999999999999998 78888765
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.043 Score=45.25 Aligned_cols=77 Identities=14% Similarity=0.136 Sum_probs=49.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~~~ 78 (202)
.+++|+|+ |++|...++..-..|+ +|+.+++++++++.+. ++ +.+.. .|..+ .+++.+.+.++ .++.
T Consensus 187 ~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~-~~---Ga~~~---i~~~~~~~~~~~~v~~~---~~~g 255 (368)
T TIGR02818 187 DTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK-KL---GATDC---VNPNDYDKPIQEVIVEI---TDGG 255 (368)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCCeE---EcccccchhHHHHHHHH---hCCC
Confidence 36899986 8999999888888898 7999999988776553 33 33221 23332 12232222222 2236
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|+++.++|.
T Consensus 256 ~d~vid~~G~ 265 (368)
T TIGR02818 256 VDYSFECIGN 265 (368)
T ss_pred CCEEEECCCC
Confidence 8999999884
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.11 Score=43.07 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=28.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
++|+|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus 42 ~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 42 ARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 35889988 6999999999999997 88888875
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.04 Score=40.35 Aligned_cols=91 Identities=20% Similarity=0.126 Sum_probs=52.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC---------------HHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS---------------REQREK 66 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~---------------~~~i~~ 66 (202)
+++|+|+ |-.|...++.+...|++|+..+..+++.+.... .... .+..+..+ ...-+.
T Consensus 22 ~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~----~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (168)
T PF01262_consen 22 KVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLES----LGAY--FIEVDYEDHLERKDFDKADYYEHPESYES 94 (168)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHH----TTTE--ESEETTTTTTTSB-CCHHHCHHHCCHHHH
T ss_pred EEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhc----ccCc--eEEEcccccccccccchhhhhHHHHHhHH
Confidence 5788885 799999999999999999999998766655332 2222 22222111 122233
Q ss_pred HHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHH
Q 028868 67 LIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS 103 (202)
Q Consensus 67 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~ 103 (202)
.+.+.. .+.|++|.++-++..+...-++.+++.
T Consensus 95 ~f~~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~ 127 (168)
T PF01262_consen 95 NFAEFI----APADIVIGNGLYWGKRAPRLVTEEMVK 127 (168)
T ss_dssp HHHHHH----HH-SEEEEHHHBTTSS---SBEHHHHH
T ss_pred HHHHHH----hhCcEEeeecccCCCCCCEEEEhHHhh
Confidence 333322 245999988887755544445554443
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.028 Score=44.87 Aligned_cols=43 Identities=21% Similarity=0.114 Sum_probs=36.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
++|-|.|+ |.+|..+|..|+..|+.|++.+++++.++...+.+
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i 48 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRI 48 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHH
Confidence 35778888 79999999999999999999999998877755443
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.025 Score=45.09 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=36.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH 42 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~ 42 (202)
|++.|.|+ |-+|..+|..|++.|++|++.+++++.++...+
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 42 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQ 42 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHH
Confidence 57889998 799999999999999999999999988777544
|
|
| >PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.18 Score=40.95 Aligned_cols=88 Identities=16% Similarity=0.159 Sum_probs=55.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH---HHhc-C----CeEEEE---------Eec----CC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE---WKNK-G----FKVTGS---------VCD----LS 59 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~---~~~~-~----~~v~~~---------~~D----v~ 59 (202)
+++.|.|+ |.+|.+++..|.+.|++|.+.+|+++..+...+. .... + .++... .+| ..
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~Dliiiav 79 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKISVNLWGRNHTTFESINTKRKNLKYLPTCHLPDNISVKSAIDEVLSDNATCIILAV 79 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCcccCCCCcCCCCeEEeCCHHHHHhCCCCEEEEEe
Confidence 46889998 7999999999999999999999987655444331 0000 0 011111 011 01
Q ss_pred CHHHHHHHHHHHHH-HhCCCccEEEEcCCCC
Q 028868 60 SREQREKLIETVTS-IFQGKLNILINNAAIA 89 (202)
Q Consensus 60 ~~~~i~~~~~~~~~-~~~~~id~vi~~ag~~ 89 (202)
....+.++++++.. .++.+.-++++..|+.
T Consensus 80 ks~~~~~~l~~l~~~~l~~~~~vv~~~nGi~ 110 (326)
T PRK14620 80 PTQQLRTICQQLQDCHLKKNTPILICSKGIE 110 (326)
T ss_pred CHHHHHHHHHHHHHhcCCCCCEEEEEEcCee
Confidence 25667888888877 5533344677777864
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.04 Score=36.07 Aligned_cols=41 Identities=22% Similarity=0.215 Sum_probs=34.1
Q ss_pred EEEecCCCchHHHHHHHHHHCC---CEEEEE-eCChhHHHHHHHHH
Q 028868 3 ALVTGGTRGIGHATVEELARFG---AIVHTC-SRNQIELDARLHEW 44 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g---~~Vi~~-~r~~~~~~~~~~~~ 44 (202)
+.|. |+|.+|.++++.|++.| .+|.+. .|++++.+++.+++
T Consensus 2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~ 46 (96)
T PF03807_consen 2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY 46 (96)
T ss_dssp EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC
T ss_pred EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh
Confidence 4455 55899999999999999 899955 99999888887664
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.078 Score=42.21 Aligned_cols=73 Identities=21% Similarity=0.295 Sum_probs=48.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++|.|+++++|.++++..-.+|++|+.+.+++++.+.+ .+ .+.+.. + .+ .. +..+ .+.+. +.++|.
T Consensus 145 ~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~---~g~~~~-~-~~--~~-~~~~---~i~~~-~~~~d~ 211 (320)
T cd08243 145 TLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KE---LGADEV-V-ID--DG-AIAE---QLRAA-PGGFDK 211 (320)
T ss_pred EEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-Hh---cCCcEE-E-ec--Cc-cHHH---HHHHh-CCCceE
Confidence 689999999999999999999999999999887665444 32 232211 1 12 11 2222 22222 357999
Q ss_pred EEEcCC
Q 028868 82 LINNAA 87 (202)
Q Consensus 82 vi~~ag 87 (202)
++.+.|
T Consensus 212 vl~~~~ 217 (320)
T cd08243 212 VLELVG 217 (320)
T ss_pred EEECCC
Confidence 999887
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.03 Score=44.77 Aligned_cols=41 Identities=20% Similarity=0.182 Sum_probs=35.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH 42 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~ 42 (202)
|++.|.|+ |-+|..+|..|++.|++|++.+++++.++...+
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~ 44 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEILKNAME 44 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHH
Confidence 46888888 789999999999999999999999988776544
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.039 Score=42.66 Aligned_cols=33 Identities=21% Similarity=0.234 Sum_probs=28.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~ 34 (202)
++|+|.|+ ||+|.++++.|+..|. ++.++|.+.
T Consensus 28 ~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 28 AKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred CcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 36888988 6999999999999998 788888764
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.058 Score=43.69 Aligned_cols=35 Identities=14% Similarity=0.227 Sum_probs=30.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
++++|.|+++++|.++++.....|.+|+.+.++.+
T Consensus 148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (341)
T cd08290 148 DWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP 182 (341)
T ss_pred CEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence 46899999999999999999999999988887653
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.093 Score=42.21 Aligned_cols=76 Identities=14% Similarity=0.203 Sum_probs=49.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|.|+++++|.++++.....|.+|+.+.+++++.+.+ .++ +.+. ++ |..+ .+..+.+... .+..+|
T Consensus 141 ~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~-v~--~~~~-~~~~~~~~~~---~~~~vd 209 (329)
T cd08250 141 ETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSL---GCDR-PI--NYKT-EDLGEVLKKE---YPKGVD 209 (329)
T ss_pred CEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHc---CCce-EE--eCCC-ccHHHHHHHh---cCCCCe
Confidence 3689999999999999888888999999999887665544 332 3211 12 2222 2222222222 224589
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.++++.|
T Consensus 210 ~v~~~~g 216 (329)
T cd08250 210 VVYESVG 216 (329)
T ss_pred EEEECCc
Confidence 9998877
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.1 Score=32.96 Aligned_cols=32 Identities=34% Similarity=0.439 Sum_probs=27.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
+++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccc
Confidence 3677777 7999999999999999999998864
|
Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A .... |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.13 Score=42.31 Aligned_cols=77 Identities=14% Similarity=0.181 Sum_probs=50.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-~~i~~~~~~~~~~~~~~ 78 (202)
.+++|.|+ |++|...++.+-..|+ +|+.+++++++++.+ .++ +.+.. .|..+. +++.+.+.++. ++.
T Consensus 188 ~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~l---Ga~~~---i~~~~~~~~~~~~v~~~~---~~g 256 (368)
T cd08300 188 STVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKF---GATDC---VNPKDHDKPIQQVLVEMT---DGG 256 (368)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHc---CCCEE---EcccccchHHHHHHHHHh---CCC
Confidence 36899985 8999999988888999 799999998877654 333 33221 233322 23333333332 236
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|+++.+.|.
T Consensus 257 ~d~vid~~g~ 266 (368)
T cd08300 257 VDYTFECIGN 266 (368)
T ss_pred CcEEEECCCC
Confidence 9999998883
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.031 Score=44.48 Aligned_cols=78 Identities=15% Similarity=0.270 Sum_probs=52.5
Q ss_pred CEEEEecCCCchHHHHHHHHH-HCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~-~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
+|++|.||+|..|.- +-+++ -.|++|+..+-+.++..-+..++. .+.. .|=-++.++.+++.+ .+...|
T Consensus 155 eTv~VSaAsGAvGql-~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G---~d~a---fNYK~e~~~~~aL~r---~~P~GI 224 (343)
T KOG1196|consen 155 ETVFVSAASGAVGQL-VGQFAKLMGCYVVGSAGSKEKVDLLKTKFG---FDDA---FNYKEESDLSAALKR---CFPEGI 224 (343)
T ss_pred CEEEEeeccchhHHH-HHHHHHhcCCEEEEecCChhhhhhhHhccC---Cccc---eeccCccCHHHHHHH---hCCCcc
Confidence 589999999999964 55555 469999999988887766665542 2111 122223344444444 454469
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+.+-|.|.
T Consensus 225 DiYfeNVGG 233 (343)
T KOG1196|consen 225 DIYFENVGG 233 (343)
T ss_pred eEEEeccCc
Confidence 999999995
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.038 Score=45.59 Aligned_cols=76 Identities=20% Similarity=0.223 Sum_probs=49.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|.|+ |++|...++.+...|+ +|+.+++++++++.+. ++ +.+. + .|..+++. .+++.+..++.+
T Consensus 193 ~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~-~~---Ga~~-~--i~~~~~~~----~~~i~~~~~~g~ 260 (371)
T cd08281 193 QSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALAR-EL---GATA-T--VNAGDPNA----VEQVRELTGGGV 260 (371)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-Hc---CCce-E--eCCCchhH----HHHHHHHhCCCC
Confidence 36899985 8999998888888899 6999999887776543 32 3321 1 23333222 222333222469
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.+.|.
T Consensus 261 d~vid~~G~ 269 (371)
T cd08281 261 DYAFEMAGS 269 (371)
T ss_pred CEEEECCCC
Confidence 999999884
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.037 Score=44.23 Aligned_cols=41 Identities=22% Similarity=0.113 Sum_probs=35.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH 42 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~ 42 (202)
+++.|.|+ |.+|..+|..|+..|++|++.+++++.++...+
T Consensus 5 ~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~ 45 (292)
T PRK07530 5 KKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRLEAGLA 45 (292)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 46788887 799999999999999999999999887766543
|
|
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.074 Score=42.07 Aligned_cols=40 Identities=20% Similarity=0.202 Sum_probs=34.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
.+++|.|+++++|.++++.....|++|+.+++++++.+.+
T Consensus 138 ~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 177 (320)
T cd05286 138 DTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA 177 (320)
T ss_pred CEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence 3689999999999999999889999999999887776554
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.047 Score=43.54 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=30.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|+++-.|++++..|.++|++|.++.|..
T Consensus 160 k~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t 193 (283)
T PRK14192 160 KHAVVVGRSAILGKPMAMMLLNANATVTICHSRT 193 (283)
T ss_pred CEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 6799999987799999999999999999888743
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.13 Score=43.58 Aligned_cols=98 Identities=12% Similarity=0.128 Sum_probs=60.4
Q ss_pred EEEEecCCCchHHHHHHHHHH---CCC----EEEEEeC--ChhHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELAR---FGA----IVHTCSR--NQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~---~g~----~Vi~~~r--~~~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~i~~~~ 68 (202)
+|.||||+|.||.++.-++++ .|. .+++++. +.++++...-++.+.. .++.+. .| +
T Consensus 125 ~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~--~-------- 193 (452)
T cd05295 125 QVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD--L-------- 193 (452)
T ss_pred EEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC--C--------
Confidence 489999999999999999996 242 4667887 5777777777765431 112221 11 1
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHH
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 120 (202)
.+.+ ...|++|..+|.... + ..+ =.+.++.|..=+-...+.+
T Consensus 194 ---~ea~-~daDvvIitag~prk-~--G~~---R~DLL~~N~~Ifk~~g~~I 235 (452)
T cd05295 194 ---DVAF-KDAHVIVLLDDFLIK-E--GED---LEGCIRSRVAICQLYGPLI 235 (452)
T ss_pred ---HHHh-CCCCEEEECCCCCCC-c--CCC---HHHHHHHHHHHHHHHHHHH
Confidence 1123 478999999997532 2 123 3445667766444444443
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.096 Score=41.99 Aligned_cols=31 Identities=16% Similarity=0.329 Sum_probs=26.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|+|.|+ ||+|..+|+.|+..|. ++.+++.+
T Consensus 1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D 32 (307)
T cd01486 1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG 32 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence 4788888 6999999999999998 78888765
|
This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole. |
| >KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.13 Score=43.54 Aligned_cols=79 Identities=19% Similarity=0.240 Sum_probs=58.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++||.|| ||||.++.+-|+..|. .|.+++.+...+..+-. .+.+-.-|+..+++ ..+.++..+|.+.++
T Consensus 14 riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDTIDlSNLNR-------QFLFrkkhVgqsKA--~vA~~~v~~Fnpn~~ 83 (603)
T KOG2013|consen 14 RILVVGA-GGIGCELLKNLALTGFEEIHIIDLDTIDLSNLNR-------QFLFRKKHVGQSKA--TVAAKAVKQFNPNIK 83 (603)
T ss_pred eEEEEec-CcccHHHHHHHHHhcCCeeEEEeccceeccchhh-------hheeehhhcCchHH--HHHHHHHHHhCCCCc
Confidence 5889998 7999999999999998 78888887655444322 24555568887655 344555566767899
Q ss_pred EEEEcCCCCC
Q 028868 81 ILINNAAIAF 90 (202)
Q Consensus 81 ~vi~~ag~~~ 90 (202)
++-+++.+..
T Consensus 84 l~~yhanI~e 93 (603)
T KOG2013|consen 84 LVPYHANIKE 93 (603)
T ss_pred eEeccccccC
Confidence 9999998764
|
|
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.15 Score=42.22 Aligned_cols=77 Identities=16% Similarity=0.113 Sum_probs=50.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-~~i~~~~~~~~~~~~~~ 78 (202)
++++|.|+ |++|...++.+-..|+ +|+.+++++++++.+. + .+.+. ++ |..+. ++..+.+.++ .++.
T Consensus 200 ~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~-~---~Ga~~-~i--~~~~~~~~~~~~v~~~---~~~g 268 (381)
T PLN02740 200 SSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK-E---MGITD-FI--NPKDSDKPVHERIREM---TGGG 268 (381)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH-H---cCCcE-EE--ecccccchHHHHHHHH---hCCC
Confidence 36899986 8999999998888998 6999999887776653 2 23322 22 33322 1222222222 2236
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|+++.++|.
T Consensus 269 ~dvvid~~G~ 278 (381)
T PLN02740 269 VDYSFECAGN 278 (381)
T ss_pred CCEEEECCCC
Confidence 9999999984
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=95.65 E-value=0.046 Score=45.50 Aligned_cols=37 Identities=14% Similarity=0.073 Sum_probs=31.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHH
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIEL 37 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~ 37 (202)
|++.|.||||.+|.++.+.|.++ ..+|..+.++.+..
T Consensus 39 ~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG 76 (381)
T PLN02968 39 KRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG 76 (381)
T ss_pred cEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC
Confidence 47899999999999999999999 56888888765443
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.079 Score=42.38 Aligned_cols=76 Identities=11% Similarity=0.189 Sum_probs=49.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++|.|+++++|.++++.+..+|++|+.+.+++++.+.+ .++ +.+- ..|..+.+...+ +.+... +..+|.
T Consensus 141 ~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~-~~~~~~--~~~~d~ 210 (323)
T cd05282 141 WVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KAL---GADE---VIDSSPEDLAQR-VKEATG--GAGARL 210 (323)
T ss_pred EEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-Hhc---CCCE---EecccchhHHHH-HHHHhc--CCCceE
Confidence 689999999999999999999999999998887765544 322 3211 122222222222 222211 236999
Q ss_pred EEEcCC
Q 028868 82 LINNAA 87 (202)
Q Consensus 82 vi~~ag 87 (202)
++.+.|
T Consensus 211 vl~~~g 216 (323)
T cd05282 211 ALDAVG 216 (323)
T ss_pred EEECCC
Confidence 999887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.049 Score=44.23 Aligned_cols=41 Identities=20% Similarity=-0.004 Sum_probs=35.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH 42 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~ 42 (202)
|++.|.|+ |-||..+|..|+..|++|++.+++++.++...+
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~ 48 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRA 48 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHH
Confidence 46778887 799999999999999999999999877665444
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.17 Score=41.71 Aligned_cols=77 Identities=14% Similarity=0.132 Sum_probs=49.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-~~i~~~~~~~~~~~~~~ 78 (202)
.+++|.|+ |++|...++..-..|+ +|+.+++++++.+.+ ++ .+.+..+ |..+. +++.+.+.++ .++.
T Consensus 189 ~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~---~Ga~~~i---~~~~~~~~~~~~v~~~---~~~~ 257 (369)
T cd08301 189 STVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KK---FGVTEFV---NPKDHDKPVQEVIAEM---TGGG 257 (369)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH---cCCceEE---cccccchhHHHHHHHH---hCCC
Confidence 36899986 8999998888888898 799999998776654 23 2332211 22221 2333333332 2346
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|+++.+.|.
T Consensus 258 ~d~vid~~G~ 267 (369)
T cd08301 258 VDYSFECTGN 267 (369)
T ss_pred CCEEEECCCC
Confidence 9999998873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.11 Score=36.30 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=31.2
Q ss_pred EEEecCCCchHHHHHHHHHHCC--CEEEEEe--CChhHHHHHHHHH
Q 028868 3 ALVTGGTRGIGHATVEELARFG--AIVHTCS--RNQIELDARLHEW 44 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g--~~Vi~~~--r~~~~~~~~~~~~ 44 (202)
+.|.|+||.||.+...-+-++. ++|+.+. ++.+++.+...++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f 46 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREF 46 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHh
Confidence 5799999999999999999987 5777543 4555555555554
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.097 Score=44.87 Aligned_cols=72 Identities=14% Similarity=0.170 Sum_probs=46.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|.++|.|. |+.|+++++.|.+.|+.|.+.+++.....+. +...+ +.+...+ .+.+ .+ ...|
T Consensus 16 ~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~---l~~~g--i~~~~~~-~~~~-----------~~-~~~d 76 (473)
T PRK00141 16 GRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETARHKL---IEVTG--VADISTA-EASD-----------QL-DSFS 76 (473)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHHHHH---HHhcC--cEEEeCC-Cchh-----------Hh-cCCC
Confidence 46888985 7999999999999999999999875443221 22223 2222211 1111 11 3568
Q ss_pred EEEEcCCCCCC
Q 028868 81 ILINNAAIAFV 91 (202)
Q Consensus 81 ~vi~~ag~~~~ 91 (202)
.||.++|+.+.
T Consensus 77 ~vV~Spgi~~~ 87 (473)
T PRK00141 77 LVVTSPGWRPD 87 (473)
T ss_pred EEEeCCCCCCC
Confidence 99999998644
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.094 Score=43.67 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=50.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+|++ .+|+.+++.+.+.|++|+.++.+++....... + ..+..|..|.+.+.+++++ ..+|
T Consensus 13 ~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a---d-----~~~~~~~~d~~~l~~~~~~------~~id 77 (395)
T PRK09288 13 TRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA---H-----RSHVIDMLDGDALRAVIER------EKPD 77 (395)
T ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh---h-----heEECCCCCHHHHHHHHHH------hCCC
Confidence 579999875 79999999999999999999987643222110 1 1355677777776666653 3688
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.++....
T Consensus 78 ~vi~~~e 84 (395)
T PRK09288 78 YIVPEIE 84 (395)
T ss_pred EEEEeeC
Confidence 8886443
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.047 Score=48.19 Aligned_cols=56 Identities=11% Similarity=-0.010 Sum_probs=42.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i 64 (202)
.++|.|. |.+|+.+++.|.++|.+++++++|+++.+...+ . ...++..|.++++.+
T Consensus 402 ~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~--g~~v~~GDat~~~~L 457 (601)
T PRK03659 402 QVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK----Y--GYKVYYGDATQLELL 457 (601)
T ss_pred CEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----C--CCeEEEeeCCCHHHH
Confidence 3667775 799999999999999999999999887765543 2 245566777775554
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.053 Score=43.38 Aligned_cols=38 Identities=18% Similarity=0.145 Sum_probs=33.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA 39 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~ 39 (202)
|++.|.|+ |-+|.++|+.|+..|++|++.+++++.++.
T Consensus 5 ~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~ 42 (295)
T PLN02545 5 KKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDPAALSR 42 (295)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 46788887 799999999999999999999999877654
|
|
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.26 Score=40.26 Aligned_cols=99 Identities=21% Similarity=0.178 Sum_probs=56.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH---HHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH---EWKN--KGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~---~~~~--~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++.|.|. |.||+++|+.|...|++|++.+++++....... .+.+ ...++..+.+-.+... ..-+-+...+..
T Consensus 147 ~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~t-~~li~~~~l~~m 224 (330)
T PRK12480 147 MTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKES-YHLFDKAMFDHV 224 (330)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHHH-HHHHhHHHHhcC
Confidence 57888887 789999999999999999999998754322111 1111 1346777666666531 111222332222
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHH
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSST 108 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 108 (202)
+.+.++-|.+-... .+.+.+.+.++.
T Consensus 225 --k~gavlIN~aRG~~-----vd~~aL~~aL~~ 250 (330)
T PRK12480 225 --KKGAILVNAARGAV-----INTPDLIAAVND 250 (330)
T ss_pred --CCCcEEEEcCCccc-----cCHHHHHHHHHc
Confidence 34555555553221 244555544443
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.055 Score=43.17 Aligned_cols=42 Identities=17% Similarity=0.105 Sum_probs=35.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE 43 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~ 43 (202)
+++.|.|+ |-+|.++|..|++.|++|++.+++++.+++..+.
T Consensus 4 ~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (287)
T PRK08293 4 KNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKER 45 (287)
T ss_pred cEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 46788887 7999999999999999999999998876665543
|
|
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.1 Score=42.86 Aligned_cols=76 Identities=18% Similarity=0.235 Sum_probs=48.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~ 78 (202)
++++|.|+ |++|...++..-..|+ +|+.+++++++.+.+. ++ +.+. + .|..+.+..+. +.+..+ ..
T Consensus 178 ~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~---Ga~~-~--i~~~~~~~~~~----i~~~~~~~g 245 (358)
T TIGR03451 178 DSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EF---GATH-T--VNSSGTDPVEA----IRALTGGFG 245 (358)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCce-E--EcCCCcCHHHH----HHHHhCCCC
Confidence 36899985 8999999888888898 4888988887765553 32 3321 1 23333222222 222222 25
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|+++.+.|.
T Consensus 246 ~d~vid~~g~ 255 (358)
T TIGR03451 246 ADVVIDAVGR 255 (358)
T ss_pred CCEEEECCCC
Confidence 8999999883
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.054 Score=48.00 Aligned_cols=54 Identities=9% Similarity=0.049 Sum_probs=40.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~ 62 (202)
.++|.|. |.+|+.+++.|.++|.+++++++++++.+...+. +..++..|.++++
T Consensus 402 ~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~------g~~v~~GDat~~~ 455 (621)
T PRK03562 402 RVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF------GMKVFYGDATRMD 455 (621)
T ss_pred cEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc------CCeEEEEeCCCHH
Confidence 4777777 6999999999999999999999999877665431 2334445555543
|
|
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.16 Score=40.79 Aligned_cols=76 Identities=14% Similarity=0.276 Sum_probs=49.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF-QGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~-~~~id 80 (202)
+++|.|+++++|.++++.+..+|++++.+.+++++.+.+. . .+.+. + .|..+.+. ..+.+.+.. +..+|
T Consensus 143 ~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~-~--~~~~~~~~---~~~~~~~~~~~~~~d 212 (334)
T PTZ00354 143 SVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-K---LAAII-L--IRYPDEEG---FAPKVKKLTGEKGVN 212 (334)
T ss_pred EEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---cCCcE-E--EecCChhH---HHHHHHHHhCCCCce
Confidence 6899999999999999999999999888888877665552 2 23221 1 22222221 222222222 13589
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.++.+.|
T Consensus 213 ~~i~~~~ 219 (334)
T PTZ00354 213 LVLDCVG 219 (334)
T ss_pred EEEECCc
Confidence 9999876
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.2 Score=37.77 Aligned_cols=32 Identities=19% Similarity=0.295 Sum_probs=27.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
++++|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 22 s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 22 ARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence 36888887 5799999999999998 68888765
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.11 Score=41.13 Aligned_cols=75 Identities=12% Similarity=0.073 Sum_probs=45.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|.|+ |++|...++.+..+|++ |+++++++++++.+ ++ .+.+..+ |..+ ..+.+.++. .+..+
T Consensus 122 ~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a-~~---~Ga~~~i---~~~~---~~~~~~~~~--~~~g~ 188 (280)
T TIGR03366 122 RRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA-LS---FGATALA---EPEV---LAERQGGLQ--NGRGV 188 (280)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HH---cCCcEec---Cchh---hHHHHHHHh--CCCCC
Confidence 36899987 89999998888888986 88888887666443 22 2332211 2111 112222221 12358
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+++.+.|.
T Consensus 189 d~vid~~G~ 197 (280)
T TIGR03366 189 DVALEFSGA 197 (280)
T ss_pred CEEEECCCC
Confidence 999998883
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.12 Score=41.87 Aligned_cols=75 Identities=19% Similarity=0.286 Sum_probs=49.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF-QGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~-~~~id 80 (202)
+++|.|+++++|.++++.+-..|.+|+.+.+++++.+.+ +++ +.+.. .+..+.+...++. +.. +..+|
T Consensus 168 ~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~---g~~~v---~~~~~~~~~~~~~----~~~~~~~vd 236 (341)
T cd08297 168 WVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KEL---GADAF---VDFKKSDDVEAVK----ELTGGGGAH 236 (341)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHc---CCcEE---EcCCCccHHHHHH----HHhcCCCCC
Confidence 689999999999999999999999999999998766544 333 32211 2222222222222 222 23699
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.++++.+
T Consensus 237 ~vl~~~~ 243 (341)
T cd08297 237 AVVVTAV 243 (341)
T ss_pred EEEEcCC
Confidence 9998665
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.24 Score=39.79 Aligned_cols=84 Identities=20% Similarity=0.211 Sum_probs=51.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH----------HHhc--CCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----------WKNK--GFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~----------~~~~--~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
+++.|.|. |-+|.++++.|++.|++|.+.+|++++.+.+.+. +-+. ..++.++. +.+.+.+.+++
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~~~~e~~~~~~~~dvvi~~--v~~~~~~~~v~ 77 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEGATGADSLEELVAKLPAPRVVWLM--VPAGEITDATI 77 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCeecCCHHHHHhhcCCCCEEEEE--ecCCcHHHHHH
Confidence 35677775 7999999999999999999999998776654321 1111 11233332 23333555555
Q ss_pred HHHHHHhCCCccEEEEcCCC
Q 028868 69 ETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~ 88 (202)
+.+.... .+=+++|.....
T Consensus 78 ~~l~~~l-~~g~ivid~st~ 96 (301)
T PRK09599 78 DELAPLL-SPGDIVIDGGNS 96 (301)
T ss_pred HHHHhhC-CCCCEEEeCCCC
Confidence 6655544 223566666544
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.15 Score=40.83 Aligned_cols=39 Identities=33% Similarity=0.444 Sum_probs=34.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
+++|.|+++++|.++++.....|++|+.+.+++++.+.+
T Consensus 149 ~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~ 187 (325)
T cd05280 149 PVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL 187 (325)
T ss_pred EEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 689999999999999988888999999999988766554
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.39 Score=38.65 Aligned_cols=110 Identities=12% Similarity=0.091 Sum_probs=69.5
Q ss_pred EecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 5 VTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 5 ItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|.|+ |.+|.++|..|+.++. ++++.+.++++++....++.+.. .++.+. . .+. +.+ ..
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~~-----------~~~-~d 64 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GDY-----------SDC-KD 64 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CCH-----------HHH-CC
Confidence 4565 8999999999998875 79999999888888777776532 122221 1 221 122 46
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGG 140 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~ 140 (202)
-|++|..||.... + ..+. .+.++.|..=...+ .+.+.+ ...+.++++|....
T Consensus 65 aDivVitag~~rk-~--g~~R---~dll~~N~~i~~~~----~~~i~~~~p~~~vivvsNP~d 117 (299)
T TIGR01771 65 ADLVVITAGAPQK-P--GETR---LELVGRNVRIMKSI----VPEVVKSGFDGIFLVATNPVD 117 (299)
T ss_pred CCEEEECCCCCCC-C--CCCH---HHHHHHHHHHHHHH----HHHHHHhCCCeEEEEeCCHHH
Confidence 8999999997532 2 2232 34556666544434 443343 34677888877653
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3 | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.22 Score=39.88 Aligned_cols=31 Identities=29% Similarity=0.446 Sum_probs=26.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~D 32 (291)
T cd01488 1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDMD 32 (291)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence 4788887 6999999999999998 78887754
|
UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.12 Score=42.10 Aligned_cols=76 Identities=22% Similarity=0.300 Sum_probs=49.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
++++|+|+ +++|...++.+...|+ +|+++++++++.+.+ .++ +.+.. .|-.+.+. .+++.+..++ .
T Consensus 174 ~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~---ga~~~---i~~~~~~~----~~~l~~~~~~~~ 241 (351)
T cd08233 174 DTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA-EEL---GATIV---LDPTEVDV----VAEVRKLTGGGG 241 (351)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh---CCCEE---ECCCccCH----HHHHHHHhCCCC
Confidence 36899985 8999999999989999 788888888776544 333 33221 23333222 2233333323 4
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|+++.+.|.
T Consensus 242 ~d~vid~~g~ 251 (351)
T cd08233 242 VDVSFDCAGV 251 (351)
T ss_pred CCEEEECCCC
Confidence 9999999883
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.087 Score=36.28 Aligned_cols=40 Identities=15% Similarity=0.086 Sum_probs=29.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEE-EEeCChhHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVH-TCSRNQIELDARL 41 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi-~~~r~~~~~~~~~ 41 (202)
++.|+||+|-+|..+++.|.++-. .++ +++++.+..+...
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~ 42 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLS 42 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeee
Confidence 578999999999999999999754 544 5555553333333
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.16 Score=41.51 Aligned_cols=79 Identities=22% Similarity=0.198 Sum_probs=47.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF-QGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~-~~~ 78 (202)
+++||+| ++++|.++++.+...|+ +|+++++++++.+.+ +++ +.+. ++..+-.+...... .+.+.. +..
T Consensus 179 ~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~---g~~~-vi~~~~~~~~~~~~---~i~~~~~~~~ 249 (361)
T cd08231 179 DTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REF---GADA-TIDIDELPDPQRRA---IVRDITGGRG 249 (361)
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHc---CCCe-EEcCcccccHHHHH---HHHHHhCCCC
Confidence 3689997 59999999988888999 999999887766544 222 3221 11111111111112 222222 236
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|+++.+.|.
T Consensus 250 ~d~vid~~g~ 259 (361)
T cd08231 250 ADVVIEASGH 259 (361)
T ss_pred CcEEEECCCC
Confidence 9999998874
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >TIGR01381 E1_like_apg7 E1-like protein-activating enzyme Gsa7p/Apg7p | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.17 Score=44.75 Aligned_cols=31 Identities=16% Similarity=0.293 Sum_probs=27.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|+|.|+ ||+|..+|+.|+..|. ++++++.+
T Consensus 340 kVLIvGa-GGLGs~VA~~La~~GVg~ItlVD~D 371 (664)
T TIGR01381 340 KVLLLGA-GTLGCNVARCLIGWGVRHITFVDNG 371 (664)
T ss_pred eEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 5889998 7999999999999998 78888764
|
This model represents a family of eukaryotic proteins found in animals, plants, and yeasts, including Apg7p (YHR171W) from Saccharomyces cerevisiae and GSA7 from Pichia pastoris. Members are about 650 to 700 residues in length and include a central domain of about 150 residues shared with the ThiF/MoeB/HesA family of proteins. A low level of similarity to ubiquitin-activating enzyme E1 is described in a paper on peroxisome autophagy mediated by GSA7, and is the basis of the name ubiquitin activating enzyme E1-like protein. Members of the family appear to be involved in protein lipidation events analogous to ubiquitination and required for membrane fusion events during autophagy. |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.23 Score=41.86 Aligned_cols=86 Identities=16% Similarity=0.021 Sum_probs=56.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH-----------H----HHhc----------CCeEEEEE
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH-----------E----WKNK----------GFKVTGSV 55 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~-----------~----~~~~----------~~~v~~~~ 55 (202)
+++.|.|. |-+|..+|..|+++|++|++.++++++.+.... + ..+. ..++.++.
T Consensus 4 ~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~~l~~g~~~~~e~~l~~~l~~~~~~g~l~~~~~~~~aDvvii~ 82 (415)
T PRK11064 4 ETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVDTINRGEIHIVEPDLDMVVKTAVEGGYLRATTTPEPADAFLIA 82 (415)
T ss_pred cEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHHHHHCCCCCcCCCCHHHHHHHHhhcCceeeecccccCCEEEEE
Confidence 45778877 789999999999999999999999887765321 0 0000 23455554
Q ss_pred ecC-------CCHHHHHHHHHHHHHHhCCCccEEEEcCCC
Q 028868 56 CDL-------SSREQREKLIETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 56 ~Dv-------~~~~~i~~~~~~~~~~~~~~id~vi~~ag~ 88 (202)
+.. .|...+.++++.+.+.. .+=.+||....+
T Consensus 83 vptp~~~~~~~dl~~v~~~~~~i~~~l-~~g~iVI~~STv 121 (415)
T PRK11064 83 VPTPFKGDHEPDLTYVEAAAKSIAPVL-KKGDLVILESTS 121 (415)
T ss_pred cCCCCCCCCCcChHHHHHHHHHHHHhC-CCCCEEEEeCCC
Confidence 443 24467777777777665 333455555543
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.3 Score=39.43 Aligned_cols=79 Identities=22% Similarity=0.188 Sum_probs=57.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
++||.|| |.||.......-..|+ +|++++-.+.+++.+.+ + |.++..-...-+ +++.+.+.+++.++ ..+
T Consensus 172 ~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~-~---Ga~~~~~~~~~~---~~~~~~~~v~~~~g~~~~ 243 (354)
T KOG0024|consen 172 KVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKK-F---GATVTDPSSHKS---SPQELAELVEKALGKKQP 243 (354)
T ss_pred eEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHH-h---CCeEEeeccccc---cHHHHHHHHHhhccccCC
Confidence 5899999 6999999888888898 89999999888877765 4 444443222222 55666666666664 259
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+.|.+.|.
T Consensus 244 d~~~dCsG~ 252 (354)
T KOG0024|consen 244 DVTFDCSGA 252 (354)
T ss_pred CeEEEccCc
Confidence 999999995
|
|
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.12 Score=42.99 Aligned_cols=40 Identities=15% Similarity=0.190 Sum_probs=34.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
+++|+|+++++|.+++...-..|++++.+++++++.+.+.
T Consensus 196 ~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~ 235 (393)
T cd08246 196 NVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR 235 (393)
T ss_pred EEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH
Confidence 6899999999999999888889999988888877765543
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.37 Score=38.69 Aligned_cols=85 Identities=18% Similarity=0.121 Sum_probs=53.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH----------HHhcC--CeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE----------WKNKG--FKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~----------~~~~~--~~v~~~~~Dv~~~~~i~~~~ 68 (202)
+++-|.|. |-+|.++++.|.+.|++|++.+|++++.+.+.+. +-+.. .++.+ .=+.+.+.+++++
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g~~~~~s~~~~~~~~~~advVi--~~vp~~~~~~~v~ 77 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKLGITARHSLEELVSKLEAPRTIW--VMVPAGEVTESVI 77 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCCCeecCCHHHHHHhCCCCCEEE--EEecCchHHHHHH
Confidence 35667775 7999999999999999999999998776554321 11100 12333 3344445666776
Q ss_pred HHHHHHhCCCccEEEEcCCCC
Q 028868 69 ETVTSIFQGKLNILINNAAIA 89 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~ 89 (202)
+.+.... .+=.++|+.....
T Consensus 78 ~~i~~~l-~~g~ivid~st~~ 97 (299)
T PRK12490 78 KDLYPLL-SPGDIVVDGGNSR 97 (299)
T ss_pred HHHhccC-CCCCEEEECCCCC
Confidence 6665443 2235777776543
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.31 Score=40.79 Aligned_cols=31 Identities=29% Similarity=0.392 Sum_probs=27.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|+|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus 44 ~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 44 RVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence 5889998 6999999999999998 78887764
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.27 Score=41.16 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=27.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 40 ~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D 71 (390)
T PRK07411 40 SVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFD 71 (390)
T ss_pred cEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 5889988 6999999999999998 78887764
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.47 Score=39.65 Aligned_cols=114 Identities=17% Similarity=0.146 Sum_probs=61.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|. +.|+||..+++.+...|.++++ +++++++++.+. + .+.+ . .|.....+..+.+.++.. +..+
T Consensus 187 ~~VlV~-G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~-~---~Ga~--~--v~~~~~~~~~~~v~~~~~--~~g~ 255 (393)
T TIGR02819 187 STVYIA-GAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQAR-S---FGCE--T--VDLSKDATLPEQIEQILG--EPEV 255 (393)
T ss_pred CEEEEE-CCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-H---cCCe--E--EecCCcccHHHHHHHHcC--CCCC
Confidence 367885 5589999998888888997554 456665554443 2 2433 1 233322222222222211 1359
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV 138 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~ 138 (202)
|++|.++|........+... ...-..++.++..+++ +|++++++..
T Consensus 256 Dvvid~~G~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~--~G~i~~~G~~ 301 (393)
T TIGR02819 256 DCAVDCVGFEARGHGHDGKK-----------EAPATVLNSLMEVTRV--GGAIGIPGLY 301 (393)
T ss_pred cEEEECCCCccccccccccc-----------cchHHHHHHHHHHhhC--CCEEEEeeec
Confidence 99999999642111001100 1222233344445544 6899998874
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.15 Score=41.52 Aligned_cols=39 Identities=21% Similarity=0.273 Sum_probs=31.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~ 40 (202)
++++|+|+ |++|...++.+...|++ |+.+++++++.+.+
T Consensus 162 ~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~ 201 (347)
T PRK10309 162 KNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALA 201 (347)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH
Confidence 47899975 89999999888889996 67888888776643
|
|
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=95.17 E-value=0.35 Score=38.22 Aligned_cols=82 Identities=11% Similarity=0.080 Sum_probs=54.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC----EEEEEeCChhHHHHHHHHHH-----------hcCCeEEEEEecCCCHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA----IVHTCSRNQIELDARLHEWK-----------NKGFKVTGSVCDLSSREQRE 65 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~----~Vi~~~r~~~~~~~~~~~~~-----------~~~~~v~~~~~Dv~~~~~i~ 65 (202)
+++.|.|+ |.+|.++++.|.+.|. .|.+.+|++++.+...+... ....++.++.+ .+..+.
T Consensus 1 m~I~iIG~-G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~aDiVilav---~p~~~~ 76 (273)
T PRK07680 1 MNIGFIGT-GNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKERYPGIHVAKTIEEVISQSDLIFICV---KPLDIY 76 (273)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHHcCCeEEECCHHHHHHhCCEEEEec---CHHHHH
Confidence 46789995 8999999999999983 78999999877665544321 00223333333 366677
Q ss_pred HHHHHHHHHhCCCccEEEEcCC
Q 028868 66 KLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 66 ~~~~~~~~~~~~~id~vi~~ag 87 (202)
++++.+...+ .+=..+++..+
T Consensus 77 ~vl~~l~~~l-~~~~~iis~~a 97 (273)
T PRK07680 77 PLLQKLAPHL-TDEHCLVSITS 97 (273)
T ss_pred HHHHHHHhhc-CCCCEEEEECC
Confidence 8888777654 22246666665
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 202 | ||||
| 1xq1_A | 266 | X-Ray Structure Of Putative Tropinone Reducatse Fro | 2e-64 | ||
| 1ae1_A | 273 | Tropinone Reductase-I Complex With Nadp Length = 27 | 1e-63 | ||
| 2ae2_A | 260 | Tropinone Reductase-Ii Complexed With Nadp+ And Pse | 6e-62 | ||
| 1ipe_A | 259 | Tropinone Reductase-Ii Complexed With Nadph Length | 7e-62 | ||
| 2zat_A | 260 | Crystal Structure Of A Mammalian Reductase Length = | 1e-25 | ||
| 3o4r_A | 261 | Crystal Structure Of Human DehydrogenaseREDUCTASE ( | 3e-25 | ||
| 3cxr_A | 291 | Crystal Structure Of Gluconate 5-Dehydrogase From S | 5e-22 | ||
| 1vl8_A | 267 | Crystal Structure Of Gluconate 5-dehydrogenase (tm0 | 2e-21 | ||
| 3d3w_A | 244 | Structure Of L-Xylulose Reductase With Bound Coenzy | 3e-21 | ||
| 1pr9_A | 244 | Human L-Xylulose Reductase Holoenzyme Length = 244 | 4e-21 | ||
| 3ftp_A | 270 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 9e-21 | ||
| 2hq1_A | 247 | Crystal Structure Of Orf 1438 A Putative GlucoseRIB | 1e-20 | ||
| 3d3w_B | 245 | Structure Of L-Xylulose Reductase With Bound Coenzy | 5e-20 | ||
| 2d1y_A | 256 | Crystal Structure Of Tt0321 From Thermus Thermophil | 8e-20 | ||
| 4g81_D | 255 | Crystal Structure Of A Hexonate Dehydrogenase Ortho | 2e-19 | ||
| 4dqx_A | 277 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 2e-19 | ||
| 4ibo_A | 271 | Crystal Structure Of A Putative Gluconate Dehydroge | 4e-19 | ||
| 1cyd_A | 244 | Carbonyl Reductase Complexed With Nadph And 2-Propa | 8e-19 | ||
| 4dc1_A | 281 | Crystal Structure Of Y202f Actinorhodin Polyketide | 2e-18 | ||
| 1w4z_A | 281 | Structure Of Actinorhodin Polyketide (Actiii) Reduc | 2e-18 | ||
| 2rh4_A | 277 | Actinorhodin Ketoreductase, Actkr, With Nadph And I | 2e-18 | ||
| 1x7g_A | 261 | Actinorhodin Polyketide Ketoreductase, Act Kr, With | 2e-18 | ||
| 4dbz_A | 281 | Crystal Structure Of V151l Actinorhodin Polyketide | 2e-18 | ||
| 3csd_B | 281 | Actinorhodin Polyketide Ketoreductase Mutant P94l B | 2e-18 | ||
| 2rhr_B | 277 | P94l Actinorhodin Ketordeuctase Mutant, With Nadph | 3e-18 | ||
| 4dc0_A | 281 | Crystal Structure Of F189w Actinorhodin Polyketide | 3e-18 | ||
| 1yxm_A | 303 | Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa | 5e-18 | ||
| 2uvd_A | 246 | The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier | 5e-18 | ||
| 1zem_A | 262 | Crystal Structure Of Nad+-Bound Xylitol Dehydrogena | 5e-18 | ||
| 3gaf_A | 256 | 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De | 6e-18 | ||
| 4b79_A | 242 | The Aeropath Project And Pseudomonas Aeruginosa Hig | 8e-18 | ||
| 1iy8_A | 267 | Crystal Structure Of Levodione Reductase Length = 2 | 2e-17 | ||
| 4iin_A | 271 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 2e-17 | ||
| 3r1i_A | 276 | Crystal Structure Of A Short-Chain Type Dehydrogena | 3e-17 | ||
| 1x1e_A | 239 | Crystal Structure Of Tt0495 Protein From Thermus Th | 5e-17 | ||
| 3ak4_A | 263 | Crystal Structure Of Nadh-Dependent Quinuclidinone | 6e-17 | ||
| 3enn_A | 249 | 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 7e-17 | ||
| 3emk_A | 246 | 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN | 8e-17 | ||
| 3pk0_A | 262 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 2e-16 | ||
| 3sj7_A | 252 | Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F | 2e-16 | ||
| 2c07_A | 285 | Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng | 2e-16 | ||
| 3sju_A | 279 | Hedamycin Polyketide Ketoreductase Bound To Nadph L | 2e-16 | ||
| 2q2q_A | 255 | Structure Of D-3-Hydroxybutyrate Dehydrogenase From | 3e-16 | ||
| 3tzk_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 6e-16 | ||
| 3tzh_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-15 | ||
| 3rsh_A | 251 | Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc | 2e-15 | ||
| 3oic_A | 258 | Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl | 2e-15 | ||
| 3u09_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 3e-15 | ||
| 3gk3_A | 269 | Crystal Structure Of Acetoacetyl-Coa Reductase From | 3e-15 | ||
| 1spx_A | 278 | Crystal Structure Of Glucose Dehydrogenase Of Caeno | 3e-15 | ||
| 3tzc_A | 251 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 6e-15 | ||
| 3rku_A | 287 | Substrate Fingerprint And The Structure Of Nadp+ De | 8e-15 | ||
| 3osu_A | 246 | Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro | 1e-14 | ||
| 1i01_A | 244 | Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr | 1e-14 | ||
| 4afn_A | 269 | Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote | 2e-14 | ||
| 2pnf_A | 248 | Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl- | 2e-14 | ||
| 1ahi_A | 255 | 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With | 2e-14 | ||
| 3pgx_A | 280 | Crystal Structure Of A Putative Carveol Dehydrogena | 2e-14 | ||
| 4fn4_A | 254 | Short-chain Nad(h)-dependent Dehydrogenase/reductas | 3e-14 | ||
| 3oec_A | 317 | Crystal Structure Of Carveol Dehydrogenase From Myc | 4e-14 | ||
| 3f9i_A | 249 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 4e-14 | ||
| 1q7c_A | 244 | The Structure Of Betaketoacyl-[acp] Reductase Y151f | 5e-14 | ||
| 3tfo_A | 264 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car | 5e-14 | ||
| 3a28_C | 258 | Crystal Structure Of L-2,3-Butanediol Dehydrogenase | 6e-14 | ||
| 3lyl_A | 247 | Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas | 6e-14 | ||
| 2yz7_A | 260 | X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F | 7e-14 | ||
| 3tjr_A | 301 | Crystal Structure Of A Rv0851c Ortholog Short Chain | 7e-14 | ||
| 3op4_A | 248 | Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr | 8e-14 | ||
| 3ctm_A | 279 | Crystal Structure Of A Carbonyl Reductase From Cand | 8e-14 | ||
| 2nm0_A | 253 | Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl | 8e-14 | ||
| 1uzl_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 8e-14 | ||
| 3rih_A | 293 | Crystal Structure Of A Putative Short Chain Dehydro | 9e-14 | ||
| 1k2w_A | 256 | Crystal Structure Of Sorbitol Dehydrogenase From R. | 1e-13 | ||
| 3ai1_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 1e-13 | ||
| 3ezl_A | 256 | Crystal Structure Of Acetyacetyl-Coa Reductase From | 2e-13 | ||
| 1zjy_A | 251 | Structure Of R-Specific Alcohol Dehydrogenase (Muta | 2e-13 | ||
| 1nxq_A | 251 | Crystal Structure Of R-Alcohol Dehydrogenase (Radh) | 2e-13 | ||
| 2ntn_A | 267 | Crystal Structure Of Maba-c60v/g139a/s144l Length = | 2e-13 | ||
| 1h5q_A | 265 | Mannitol Dehydrogenase From Agaricus Bisporus Lengt | 3e-13 | ||
| 1geg_A | 256 | Cryatal Structure Analysis Of Meso-2,3-Butanediol D | 3e-13 | ||
| 2ew8_A | 249 | Crystal Structure Of The (s)-specific 1-phenylethan | 3e-13 | ||
| 3awd_A | 260 | Crystal Structure Of Gox2181 Length = 260 | 3e-13 | ||
| 3tsc_A | 277 | Crystal Structure Of Short Chain Dehydrogenase Map_ | 3e-13 | ||
| 3vtz_A | 269 | Structure Of Thermoplasma Volcanium Aldohexose Dehy | 4e-13 | ||
| 3ai3_A | 263 | The Crystal Structure Of L-Sorbose Reductase From G | 4e-13 | ||
| 1uzm_A | 247 | Maba From Mycobacterium Tuberculosis Length = 247 | 4e-13 | ||
| 1zbq_A | 327 | Crystal Structure Of Human 17-beta-hydroxysteroid D | 4e-13 | ||
| 3un1_A | 260 | Crystal Structure Of An Oxidoreductase From Sinorhi | 4e-13 | ||
| 2bd0_A | 244 | Chlorobium Tepidum Sepiapterin Reductase Complexed | 4e-13 | ||
| 2b4q_A | 276 | Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex | 5e-13 | ||
| 3uf0_A | 273 | Crystal Structure Of A Putative Nad(P) Dependent Gl | 6e-13 | ||
| 4dml_A | 269 | 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn | 6e-13 | ||
| 3lf1_A | 265 | Apo Structure Of The Short Chain Oxidoreductase Q9h | 7e-13 | ||
| 4fgs_A | 273 | Crystal Structure Of A Probable Dehydrogenase Prote | 8e-13 | ||
| 3v8b_A | 283 | Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro | 9e-13 | ||
| 1xkq_A | 280 | Crystal Structure Of Short-Chain DehydrogenaseREDUC | 1e-12 | ||
| 2qq5_A | 260 | Crystal Structure Of Human Sdr Family Member 1 Leng | 1e-12 | ||
| 2ph3_A | 245 | Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei | 1e-12 | ||
| 1wmb_A | 260 | Crystal Structure Of Nad Dependent D-3-Hydroxybutyl | 1e-12 | ||
| 3rkr_A | 262 | Crystal Structure Of A Metagenomic Short-Chain Oxid | 1e-12 | ||
| 3v2g_A | 271 | Crystal Structure Of A DehydrogenaseREDUCTASE FROM | 2e-12 | ||
| 4iqg_C | 271 | Crystal Structure Of Bpro0239 Oxidoreductase From P | 2e-12 | ||
| 1doh_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 2e-12 | ||
| 3aus_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 2e-12 | ||
| 1ybv_A | 283 | Structure Of Trihydroxynaphthalene Reductase In Com | 2e-12 | ||
| 3ay6_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 2e-12 | ||
| 3ay7_A | 269 | Crystal Structure Of Bacillus Megaterium Glucose De | 2e-12 | ||
| 2ztm_A | 260 | T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L | 3e-12 | ||
| 3v2h_A | 281 | The Crystal Structure Of D-Beta-Hydroxybutyrate Deh | 4e-12 | ||
| 2cfc_A | 250 | Structural Basis For Stereo Selectivity In The (R)- | 5e-12 | ||
| 4eso_A | 255 | Crystal Structure Of A Putative Oxidoreductase Prot | 5e-12 | ||
| 3vc7_A | 254 | Crystal Structure Of A Putative Oxidoreductase From | 5e-12 | ||
| 2et6_A | 604 | (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid | 5e-12 | ||
| 1nff_A | 260 | Crystal Structure Of Rv2002 Gene Product From Mycob | 5e-12 | ||
| 2ztu_A | 260 | T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C | 5e-12 | ||
| 3grp_A | 266 | 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl- | 5e-12 | ||
| 3nug_A | 247 | Crystal Structure Of Wild Type Tetrameric Pyridoxal | 6e-12 | ||
| 3icc_A | 255 | Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car | 6e-12 | ||
| 3gvc_A | 277 | Crystal Structure Of Probable Short-Chain Dehydroge | 9e-12 | ||
| 3u0b_A | 454 | Crystal Structure Of An Oxidoreductase From Mycobac | 9e-12 | ||
| 4fc6_A | 277 | Studies On Dcr Shed New Light On Peroxisomal Beta-O | 1e-11 | ||
| 4e6p_A | 259 | Crystal Structure Of A Probable Sorbitol Dehydrogen | 1e-11 | ||
| 3ndr_A | 247 | Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro | 2e-11 | ||
| 4imr_A | 275 | Crystal Structure Of 3-oxoacyl (acyl-carrier-protei | 2e-11 | ||
| 3o38_A | 266 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 2e-11 | ||
| 1xhl_A | 297 | Crystal Structure Of Putative Tropinone Reductase-I | 2e-11 | ||
| 4iiu_A | 267 | Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car | 2e-11 | ||
| 1gz6_A | 319 | (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat | 2e-11 | ||
| 3tox_A | 280 | Crystal Structure Of A Short Chain Dehydrogenase In | 3e-11 | ||
| 2cf2_E | 226 | Architecture Of Mammalian Fatty Acid Synthase Lengt | 3e-11 | ||
| 3i4f_A | 264 | Structure Of Putative 3-oxoacyl-reductase From Baci | 5e-11 | ||
| 3i3o_A | 291 | 2.06 Angstrom Resolution Crystal Structure Of A Sho | 8e-11 | ||
| 3ijr_A | 291 | 2.05 Angstrom Resolution Crystal Structure Of A Sho | 9e-11 | ||
| 4hp8_A | 247 | Crystal Structure Of A Putative 2-Deoxy-D-Gluconate | 1e-10 | ||
| 1nfr_A | 260 | Rv2002 Gene Product From Mycobacterium Tuberculosis | 1e-10 | ||
| 3lls_A | 475 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 1e-10 | ||
| 3v1t_C | 462 | Crystal Structure Of A Putative Ketoacyl Reductase | 1e-10 | ||
| 3t7c_A | 299 | Crystal Structure Of Carveol Dehydrogenase From Myc | 1e-10 | ||
| 4fw8_A | 454 | Crystal Structure Of Fabg4 Complexed With Coenzyme | 1e-10 | ||
| 3q6i_A | 446 | Crystal Structure Of Fabg4 And Coenzyme Binary Comp | 1e-10 | ||
| 2nwq_A | 272 | Short Chain Dehydrogenase From Pseudomonas Aerugino | 1e-10 | ||
| 3gdf_A | 267 | Crystal Structure Of The Nadp-Dependent Mannitol De | 1e-10 | ||
| 3m1l_A | 432 | Crystal Strucutre Of A C-Terminal Trunacted Mutant | 1e-10 | ||
| 1g6k_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant E | 2e-10 | ||
| 3tzq_B | 271 | Crystal Structure Of A Short-Chain Type Dehydrogena | 2e-10 | ||
| 1rwb_A | 261 | Cooperative Effect Of Two Surface Amino Acid Mutati | 2e-10 | ||
| 3kzv_A | 254 | The Crystal Structure Of A Cytoplasmic Protein With | 2e-10 | ||
| 3r3s_A | 294 | Structure Of The Ygha Oxidoreductase From Salmonell | 2e-10 | ||
| 2ehd_A | 234 | Crystal Structure Analysis Of Oxidoreductase Length | 2e-10 | ||
| 2pd6_A | 264 | Structure Of Human Hydroxysteroid Dehydrogenase Typ | 3e-10 | ||
| 2jap_A | 247 | Clavulanic Acid Dehydrogenase: Structural And Bioch | 4e-10 | ||
| 3oml_A | 613 | Structure Of Full-Length Peroxisomal Multifunctiona | 4e-10 | ||
| 2wdz_A | 254 | Crystal Structure Of The Short Chain Dehydrogenase | 6e-10 | ||
| 1gee_A | 261 | Crystal Structure Of Glucose Dehydrogenase Mutant Q | 6e-10 | ||
| 1gco_A | 261 | Crystal Structure Of Glucose Dehydrogenase Complexe | 6e-10 | ||
| 3n74_A | 261 | Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote | 6e-10 | ||
| 3m1a_A | 281 | The Crystal Structure Of A Short-Chain Dehydrogenas | 8e-10 | ||
| 2hsd_A | 253 | The Refined Three-Dimensional Structure Of 3alpha,2 | 1e-09 | ||
| 1hdc_A | 254 | Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste | 1e-09 | ||
| 2zk7_A | 257 | Structure Of A C-Terminal Deletion Mutant Of Thermo | 1e-09 | ||
| 3qiv_A | 253 | Crystal Structure Of A Putative Short-Chain Dehydro | 1e-09 | ||
| 2dtd_A | 264 | Structure Of Thermoplasma Acidophilum Aldohexose De | 1e-09 | ||
| 3asu_A | 248 | Crystal Structure Of Serine Dehydrogenase From Esch | 1e-09 | ||
| 2y93_A | 281 | Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2 | 2e-09 | ||
| 1o5i_A | 249 | Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei | 2e-09 | ||
| 1hxh_A | 253 | Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D | 3e-09 | ||
| 1xg5_A | 279 | Structure Of Human Putative Dehydrogenase Mgc4172 I | 3e-09 | ||
| 2jah_A | 247 | Biochemical And Structural Analysis Of The Clavulan | 5e-09 | ||
| 3is3_A | 270 | Crystal Structure Of 17beta-Hydroxysteroid Dehydrog | 6e-09 | ||
| 3uve_A | 286 | Crystal Structure Of Carveol Dehydrogenase ((+)-Tra | 7e-09 | ||
| 2gdz_A | 267 | Crystal Structure Of 15-Hydroxyprostaglandin Dehydr | 8e-09 | ||
| 1edo_A | 244 | The X-Ray Structure Of Beta-Keto Acyl Carrier Prote | 1e-08 | ||
| 2bgk_A | 278 | X-Ray Structure Of Apo-Secoisolariciresinol Dehydro | 1e-08 | ||
| 4e4y_A | 244 | The Crystal Structure Of A Short Chain Dehydrogenas | 2e-08 | ||
| 3sx2_A | 278 | Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca | 2e-08 | ||
| 3itd_A | 270 | Crystal Structure Of An Inactive 17beta-Hydroxyster | 2e-08 | ||
| 4egf_A | 266 | Crystal Structure Of A L-Xylulose Reductase From My | 2e-08 | ||
| 1bdb_A | 277 | Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From | 2e-08 | ||
| 2fwm_X | 250 | Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih | 2e-08 | ||
| 3f1l_A | 252 | The 0.95 A Structure Of An Oxidoreductase, Ycik Fro | 2e-08 | ||
| 3f5q_A | 262 | Crystal Structure Of Putative Short Chain Dehydroge | 2e-08 | ||
| 1yb1_A | 272 | Crystal Structure Of Human 17-Beta-Hydroxysteroid D | 3e-08 | ||
| 3uxy_A | 266 | The Crystal Structure Of Short Chain Dehydrogenase | 3e-08 | ||
| 3f5s_A | 255 | Crystal Structure Of Putatitve Short Chain Dehydrog | 3e-08 | ||
| 3g1t_A | 258 | Crystal Structure Of Short Chain Dehydrogenase From | 3e-08 | ||
| 1w6u_A | 302 | Structure Of Human Decr Ternary Complex Length = 30 | 6e-08 | ||
| 3p19_A | 266 | Improved Nadph-Dependent Blue Fluorescent Protein L | 7e-08 | ||
| 3imf_A | 257 | 1.99 Angstrom Resolution Crystal Structure Of A Sho | 8e-08 | ||
| 4e3z_A | 272 | Crystal Structure Of A Oxidoreductase From Rhizobiu | 1e-07 | ||
| 3ioy_A | 319 | Structure Of Putative Short-Chain Dehydrogenase (Sa | 2e-07 | ||
| 3uwr_A | 286 | Crystal Structure Of Carveol Dehydrogenase From Myc | 2e-07 | ||
| 1yde_A | 270 | Crystal Structure Of Human Retinal Short-Chain Dehy | 2e-07 | ||
| 1u7t_A | 261 | Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT | 3e-07 | ||
| 1so8_A | 261 | Abeta-bound Human Abad Structure [also Known As 3-h | 3e-07 | ||
| 2o23_A | 265 | The Structure Of Wild-Type Human Hadh2 (17beta-Hydr | 3e-07 | ||
| 1xu7_A | 286 | Crystal Structure Of The Interface Open Conformatio | 4e-07 | ||
| 2rbe_A | 275 | The Discovery Of 2-Anilinothiazolones As 11beta-Hsd | 4e-07 | ||
| 3pdj_A | 273 | Crystal Structure Of Human 11-Beta-Hydroxysteroid D | 4e-07 | ||
| 2ilt_A | 275 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 4e-07 | ||
| 2irw_A | 264 | Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W | 4e-07 | ||
| 3d5q_A | 272 | Crystal Structure Of 11b-Hsd1 In Complex With Triaz | 4e-07 | ||
| 3i1j_A | 247 | Structure Of A Putative Short Chain Dehydrogenase F | 5e-07 | ||
| 3ch6_A | 286 | Crystal Structure Of 11beta-Hsd1 Double Mutant (L26 | 5e-07 | ||
| 2bel_A | 283 | Structure Of Human 11-Beta-Hydroxysteroid Dehydroge | 5e-07 | ||
| 2pfg_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Big | 6e-07 | ||
| 4bb6_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 6e-07 | ||
| 1wma_A | 276 | Crystal Structure Of Human Cbr1 In Complex With Hyd | 6e-07 | ||
| 3s55_A | 281 | Crystal Structure Of A Putative Short-Chain Dehydro | 6e-07 | ||
| 4bb5_A | 292 | Free-Wilson And Structural Approaches To Co-Optimis | 6e-07 | ||
| 4hfr_A | 272 | Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In | 6e-07 | ||
| 2hrb_A | 274 | Crystal Structure Of Human Carbonyl Reductase 3, Co | 7e-07 | ||
| 3f1k_A | 252 | Crystal Structure Of Ycik From E. Coli, An Oxidored | 7e-07 | ||
| 2a4k_A | 263 | 3-Oxoacyl-[acyl Carrier Protein] Reductase From The | 1e-06 | ||
| 1n5d_A | 288 | Crystal Structure Of Porcine Testicular Carbonyl Re | 1e-06 | ||
| 1w73_A | 302 | Binary Structure Of Human Decr Solved By Semet Sad. | 1e-06 | ||
| 2ag5_A | 246 | Crystal Structure Of Human Dhrs6 Length = 246 | 2e-06 | ||
| 3ksu_A | 262 | Crystal Structure Of Short-Chain Dehydrogenase From | 2e-06 | ||
| 3afm_A | 258 | Crystal Structure Of Aldose Reductase A1-R Responsi | 2e-06 | ||
| 1a27_A | 289 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C | 3e-06 | ||
| 1fdw_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M | 3e-06 | ||
| 1fdu_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 M | 3e-06 | ||
| 1equ_A | 327 | Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin | 3e-06 | ||
| 1fds_A | 327 | Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C | 3e-06 | ||
| 1ja9_A | 274 | Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen | 3e-06 | ||
| 1iol_A | 327 | Estrogenic 17-beta Hydroxysteroid Dehydrogenase Com | 3e-06 | ||
| 1uls_A | 245 | Crystal Structure Of Tt0140 From Thermus Thermophil | 3e-06 | ||
| 3e03_A | 274 | Crystal Structure Of A Putative Dehydrogenase From | 5e-06 | ||
| 3lz6_A | 263 | Guinea Pig 11beta Hydroxysteroid Dehydrogenase With | 7e-06 | ||
| 3e9q_A | 273 | Crystal Structure Of The Short Chain Dehydrogenase | 7e-06 | ||
| 3u5t_A | 267 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 7e-06 | ||
| 1xse_A | 295 | Crystal Structure Of Guinea Pig 11beta-Hydroxystero | 7e-06 | ||
| 1e3w_A | 261 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 7e-06 | ||
| 1e6w_A | 260 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 7e-06 | ||
| 3bmc_B | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 8e-06 | ||
| 1e3s_A | 261 | Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co | 8e-06 | ||
| 2wd7_A | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 8e-06 | ||
| 3g49_A | 277 | N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b- | 8e-06 | ||
| 3dwf_A | 276 | Crystal Structure Of The Guinea Pig 11beta-Hydroxys | 9e-06 | ||
| 3gmd_A | 264 | Structure-Based Design Of 7-Azaindole-Pyrrolidines | 9e-06 | ||
| 2z1n_A | 260 | Crystal Structure Of Ape0912 From Aeropyrum Pernix | 9e-06 | ||
| 3bmc_A | 288 | Structure Of Pteridine Reductase 1 (Ptr1) From Tryp | 1e-05 | ||
| 3iah_A | 256 | Crystal Structure Of Short Chain Dehydrogenase (yci | 1e-05 | ||
| 3l77_A | 235 | X-Ray Structure Alcohol Dehydrogenase From Archaeon | 1e-05 | ||
| 1y5m_A | 276 | The Crystal Structure Of Murine 11b-Hydroxysteroid | 1e-05 | ||
| 3tn7_A | 257 | Crystal Structure Of Short-Chain Alcohol Dehydrogen | 1e-05 | ||
| 3t4x_A | 267 | Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU | 4e-05 | ||
| 4gkb_A | 258 | Crystal Structure Of A Short Chain Dehydrogenase Ho | 4e-05 | ||
| 3nyw_A | 250 | Crystal Structure Of A Betaketoacyl-[acp] Reductase | 5e-05 | ||
| 1mxf_A | 276 | Crystal Structure Of Inhibitor Complex Of Putative | 6e-05 | ||
| 3pxx_A | 287 | Crystal Structure Of Carveol Dehydrogenase From Myc | 7e-05 | ||
| 3qlj_A | 322 | Crystal Structure Of A Short Chain Dehydrogenase Fr | 8e-05 | ||
| 4eit_A | 276 | Crystal Structure Of An Enoyl-(Acyl Carrier Protein | 8e-05 | ||
| 3e9n_A | 245 | Crystal Structure Of A Putative Short-Chain Dehydro | 9e-05 | ||
| 1mxh_A | 276 | Crystal Structure Of Substrate Complex Of Putative | 1e-04 | ||
| 2dkn_A | 255 | Crystal Structure Of The 3-alpha-hydroxysteroid Deh | 1e-04 | ||
| 3jq7_B | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 1e-04 | ||
| 3grk_A | 293 | Crystal Structure Of Short Chain Dehydrogenase Redu | 1e-04 | ||
| 2wd7_B | 268 | Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce | 1e-04 | ||
| 3jq7_A | 288 | Crystal Structure Of Pteridine Reductase 1 (Ptr1) F | 2e-04 | ||
| 2c7v_A | 268 | Structure Of Trypanosoma Brucei Pteridine Reductase | 2e-04 | ||
| 3kvo_A | 346 | Crystal Structure Of The Catalytic Domain Of Human | 2e-04 | ||
| 1nas_A | 259 | Sepiapterin Reductase Complexed With N-acetyl Serot | 3e-04 | ||
| 3u9l_A | 324 | The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr | 3e-04 | ||
| 1sep_A | 261 | Mouse Sepiapterin Reductase Complexed With Nadp And | 4e-04 | ||
| 3ged_A | 247 | Fingerprint And Structural Analysis Of A Apo Scor E | 4e-04 | ||
| 3ek2_A | 271 | Crystal Structure Of Eonyl-(Acyl Carrier Protein) R | 6e-04 | ||
| 3oif_A | 266 | Crystal Structure Of Enoyl-Acp Reductases I (Fabi) | 7e-04 |
| >pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266 | Back alignment and structure |
|
| >pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273 | Back alignment and structure |
|
| >pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260 | Back alignment and structure |
|
| >pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259 | Back alignment and structure |
|
| >pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260 | Back alignment and structure |
|
| >pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261 | Back alignment and structure |
|
| >pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291 | Back alignment and structure |
|
| >pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244 | Back alignment and structure |
|
| >pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244 | Back alignment and structure |
|
| >pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270 | Back alignment and structure |
|
| >pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256 | Back alignment and structure |
|
| >pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255 | Back alignment and structure |
|
| >pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277 | Back alignment and structure |
|
| >pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271 | Back alignment and structure |
|
| >pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244 | Back alignment and structure |
|
| >pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281 | Back alignment and structure |
|
| >pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261 | Back alignment and structure |
|
| >pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281 | Back alignment and structure |
|
| >pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277 | Back alignment and structure |
|
| >pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281 | Back alignment and structure |
|
| >pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303 | Back alignment and structure |
|
| >pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246 | Back alignment and structure |
|
| >pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262 | Back alignment and structure |
|
| >pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256 | Back alignment and structure |
|
| >pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242 | Back alignment and structure |
|
| >pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267 | Back alignment and structure |
|
| >pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271 | Back alignment and structure |
|
| >pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276 | Back alignment and structure |
|
| >pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239 | Back alignment and structure |
|
| >pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263 | Back alignment and structure |
|
| >pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249 | Back alignment and structure |
|
| >pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246 | Back alignment and structure |
|
| >pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262 | Back alignment and structure |
|
| >pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252 | Back alignment and structure |
|
| >pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285 | Back alignment and structure |
|
| >pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279 | Back alignment and structure |
|
| >pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255 | Back alignment and structure |
|
| >pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251 | Back alignment and structure |
|
| >pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258 | Back alignment and structure |
|
| >pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269 | Back alignment and structure |
|
| >pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278 | Back alignment and structure |
|
| >pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251 | Back alignment and structure |
|
| >pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287 | Back alignment and structure |
|
| >pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246 | Back alignment and structure |
|
| >pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244 | Back alignment and structure |
|
| >pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269 | Back alignment and structure |
|
| >pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248 | Back alignment and structure |
|
| >pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255 | Back alignment and structure |
|
| >pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280 | Back alignment and structure |
|
| >pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254 | Back alignment and structure |
|
| >pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317 | Back alignment and structure |
|
| >pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249 | Back alignment and structure |
|
| >pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244 | Back alignment and structure |
|
| >pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264 | Back alignment and structure |
|
| >pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258 | Back alignment and structure |
|
| >pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247 | Back alignment and structure |
|
| >pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260 | Back alignment and structure |
|
| >pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301 | Back alignment and structure |
|
| >pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248 | Back alignment and structure |
|
| >pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279 | Back alignment and structure |
|
| >pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253 | Back alignment and structure |
|
| >pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293 | Back alignment and structure |
|
| >pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256 | Back alignment and structure |
|
| >pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263 | Back alignment and structure |
|
| >pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256 | Back alignment and structure |
|
| >pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251 | Back alignment and structure |
|
| >pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251 | Back alignment and structure |
|
| >pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267 | Back alignment and structure |
|
| >pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265 | Back alignment and structure |
|
| >pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256 | Back alignment and structure |
|
| >pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249 | Back alignment and structure |
|
| >pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260 | Back alignment and structure |
|
| >pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277 | Back alignment and structure |
|
| >pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269 | Back alignment and structure |
|
| >pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263 | Back alignment and structure |
|
| >pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247 | Back alignment and structure |
|
| >pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327 | Back alignment and structure |
|
| >pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260 | Back alignment and structure |
|
| >pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244 | Back alignment and structure |
|
| >pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276 | Back alignment and structure |
|
| >pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273 | Back alignment and structure |
|
| >pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269 | Back alignment and structure |
|
| >pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265 | Back alignment and structure |
|
| >pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273 | Back alignment and structure |
|
| >pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283 | Back alignment and structure |
|
| >pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280 | Back alignment and structure |
|
| >pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260 | Back alignment and structure |
|
| >pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245 | Back alignment and structure |
|
| >pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262 | Back alignment and structure |
|
| >pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271 | Back alignment and structure |
|
| >pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271 | Back alignment and structure |
|
| >pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283 | Back alignment and structure |
|
| >pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269 | Back alignment and structure |
|
| >pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269 | Back alignment and structure |
|
| >pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269 | Back alignment and structure |
|
| >pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260 | Back alignment and structure |
|
| >pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281 | Back alignment and structure |
|
| >pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250 | Back alignment and structure |
|
| >pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255 | Back alignment and structure |
|
| >pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254 | Back alignment and structure |
|
| >pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604 | Back alignment and structure |
|
| >pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260 | Back alignment and structure |
|
| >pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266 | Back alignment and structure |
|
| >pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255 | Back alignment and structure |
|
| >pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277 | Back alignment and structure |
|
| >pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454 | Back alignment and structure |
|
| >pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277 | Back alignment and structure |
|
| >pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259 | Back alignment and structure |
|
| >pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247 | Back alignment and structure |
|
| >pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275 | Back alignment and structure |
|
| >pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297 | Back alignment and structure |
|
| >pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267 | Back alignment and structure |
|
| >pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319 | Back alignment and structure |
|
| >pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280 | Back alignment and structure |
|
| >pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226 | Back alignment and structure |
|
| >pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264 | Back alignment and structure |
|
| >pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291 | Back alignment and structure |
|
| >pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291 | Back alignment and structure |
|
| >pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247 | Back alignment and structure |
|
| >pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260 | Back alignment and structure |
|
| >pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475 | Back alignment and structure |
|
| >pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462 | Back alignment and structure |
|
| >pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299 | Back alignment and structure |
|
| >pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454 | Back alignment and structure |
|
| >pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446 | Back alignment and structure |
|
| >pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272 | Back alignment and structure |
|
| >pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267 | Back alignment and structure |
|
| >pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432 | Back alignment and structure |
|
| >pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271 | Back alignment and structure |
|
| >pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261 | Back alignment and structure |
|
| >pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254 | Back alignment and structure |
|
| >pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294 | Back alignment and structure |
|
| >pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234 | Back alignment and structure |
|
| >pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264 | Back alignment and structure |
|
| >pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247 | Back alignment and structure |
|
| >pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613 | Back alignment and structure |
|
| >pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254 | Back alignment and structure |
|
| >pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261 | Back alignment and structure |
|
| >pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261 | Back alignment and structure |
|
| >pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281 | Back alignment and structure |
|
| >pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253 | Back alignment and structure |
|
| >pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254 | Back alignment and structure |
|
| >pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257 | Back alignment and structure |
|
| >pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253 | Back alignment and structure |
|
| >pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264 | Back alignment and structure |
|
| >pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248 | Back alignment and structure |
|
| >pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281 | Back alignment and structure |
|
| >pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249 | Back alignment and structure |
|
| >pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253 | Back alignment and structure |
|
| >pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279 | Back alignment and structure |
|
| >pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247 | Back alignment and structure |
|
| >pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286 | Back alignment and structure |
|
| >pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267 | Back alignment and structure |
|
| >pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244 | Back alignment and structure |
|
| >pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278 | Back alignment and structure |
|
| >pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244 | Back alignment and structure |
|
| >pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278 | Back alignment and structure |
|
| >pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270 | Back alignment and structure |
|
| >pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266 | Back alignment and structure |
|
| >pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277 | Back alignment and structure |
|
| >pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250 | Back alignment and structure |
|
| >pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252 | Back alignment and structure |
|
| >pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262 | Back alignment and structure |
|
| >pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272 | Back alignment and structure |
|
| >pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266 | Back alignment and structure |
|
| >pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255 | Back alignment and structure |
|
| >pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258 | Back alignment and structure |
|
| >pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302 | Back alignment and structure |
|
| >pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266 | Back alignment and structure |
|
| >pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257 | Back alignment and structure |
|
| >pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272 | Back alignment and structure |
|
| >pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319 | Back alignment and structure |
|
| >pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286 | Back alignment and structure |
|
| >pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270 | Back alignment and structure |
|
| >pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261 | Back alignment and structure |
|
| >pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261 | Back alignment and structure |
|
| >pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265 | Back alignment and structure |
|
| >pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286 | Back alignment and structure |
|
| >pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275 | Back alignment and structure |
|
| >pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264 | Back alignment and structure |
|
| >pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|3I1J|A Chain A, Structure Of A Putative Short Chain Dehydrogenase From Pseudomonas Syringae Length = 247 | Back alignment and structure |
|
| >pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286 | Back alignment and structure |
|
| >pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283 | Back alignment and structure |
|
| >pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2 Length = 276 | Back alignment and structure |
|
| >pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp Length = 276 | Back alignment and structure |
|
| >pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281 | Back alignment and structure |
|
| >pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292 | Back alignment and structure |
|
| >pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272 | Back alignment and structure |
|
| >pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274 | Back alignment and structure |
|
| >pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252 | Back alignment and structure |
|
| >pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263 | Back alignment and structure |
|
| >pdb|1N5D|A Chain A, Crystal Structure Of Porcine Testicular Carbonyl Reductase 20beta-Hydroxysteroid Dehydrogenase Length = 288 | Back alignment and structure |
|
| >pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302 | Back alignment and structure |
|
| >pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246 | Back alignment and structure |
|
| >pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262 | Back alignment and structure |
|
| >pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258 | Back alignment and structure |
|
| >pdb|1A27|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 C-Terminal Deletion Mutant Complexed With Estradiol And Nadp+ Length = 289 | Back alignment and structure |
|
| >pdb|1FDW|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221q Complexed With Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|1FDU|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Mutant H221l Complexed With Estradiol And Nadp+ Length = 327 | Back alignment and structure |
|
| >pdb|1EQU|A Chain A, Type 1 17-Beta Hydroxysteroid Dehydrogenase Equilin Complexed With Nadp+ Length = 327 | Back alignment and structure |
|
| >pdb|1FDS|A Chain A, Human 17-Beta-Hydroxysteroid-Dehydrogenase Type 1 Complexed With 17- Beta-Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274 | Back alignment and structure |
|
| >pdb|1IOL|A Chain A, Estrogenic 17-beta Hydroxysteroid Dehydrogenase Complexed 17-beta- Estradiol Length = 327 | Back alignment and structure |
|
| >pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245 | Back alignment and structure |
|
| >pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274 | Back alignment and structure |
|
| >pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263 | Back alignment and structure |
|
| >pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273 | Back alignment and structure |
|
| >pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267 | Back alignment and structure |
|
| >pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295 | Back alignment and structure |
|
| >pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261 | Back alignment and structure |
|
| >pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260 | Back alignment and structure |
|
| >pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261 | Back alignment and structure |
|
| >pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277 | Back alignment and structure |
|
| >pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276 | Back alignment and structure |
|
| >pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264 | Back alignment and structure |
|
| >pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260 | Back alignment and structure |
|
| >pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288 | Back alignment and structure |
|
| >pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256 | Back alignment and structure |
|
| >pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235 | Back alignment and structure |
|
| >pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276 | Back alignment and structure |
|
| >pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257 | Back alignment and structure |
|
| >pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267 | Back alignment and structure |
|
| >pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258 | Back alignment and structure |
|
| >pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250 | Back alignment and structure |
|
| >pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287 | Back alignment and structure |
|
| >pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322 | Back alignment and structure |
|
| >pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276 | Back alignment and structure |
|
| >pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245 | Back alignment and structure |
|
| >pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276 | Back alignment and structure |
|
| >pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255 | Back alignment and structure |
|
| >pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293 | Back alignment and structure |
|
| >pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268 | Back alignment and structure |
|
| >pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288 | Back alignment and structure |
|
| >pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268 | Back alignment and structure |
|
| >pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346 | Back alignment and structure |
|
| >pdb|1NAS|A Chain A, Sepiapterin Reductase Complexed With N-acetyl Serotonin Length = 259 | Back alignment and structure |
|
| >pdb|3U9L|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase (Nadph) From Sinorhizobium Meliloti Length = 324 | Back alignment and structure |
|
| >pdb|1SEP|A Chain A, Mouse Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 261 | Back alignment and structure |
|
| >pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247 | Back alignment and structure |
|
| >pdb|3EK2|A Chain A, Crystal Structure Of Eonyl-(Acyl Carrier Protein) Reductase From Burkholderia Pseudomallei 1719b Length = 271 | Back alignment and structure |
|
| >pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273 | Back alignment and structure |
|---|
Score = 296 bits (760), Expect = e-102
Identities = 111/191 (58%), Positives = 144/191 (75%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
TALVTGG++GIG+A VEELA GA V+TCSRN+ ELD L W+ KG V GSVCDL S
Sbjct: 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS 81
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R +R+KL++TV +F GKLNIL+NNA + K D T +D + + TNFE+ +HLSQ+A
Sbjct: 82 RTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIA 141
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+PL KAS NG+++F+SS+ G +PSVSLY A KGA+NQ+TK+LACEWAKDNIR N+VAP
Sbjct: 142 YPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAP 201
Query: 181 WVIKTSMIKPF 191
VI T +++
Sbjct: 202 GVILTPLVETA 212
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260 | Back alignment and structure |
|---|
Score = 291 bits (747), Expect = e-101
Identities = 113/191 (59%), Positives = 139/191 (72%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
TALVTGG+RGIG+ VEELA GA V+TCSRNQ EL+ L +W++KGFKV SVCDLSS
Sbjct: 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS 69
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R +R++L+ TV + F GKLNIL+NNA I K D T ED S + S NFE+ +HLS LA
Sbjct: 70 RSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLA 129
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HP KAS G++VFISSV G +P ++YGA KGAM+QLT+ LA EWAKDNIR N V P
Sbjct: 130 HPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP 189
Query: 181 WVIKTSMIKPF 191
VI TS+++
Sbjct: 190 GVIATSLVEMT 200
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266 | Back alignment and structure |
|---|
Score = 290 bits (745), Expect = e-100
Identities = 116/191 (60%), Positives = 142/191 (74%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+ L +W+ KGF+VTGSVCD S
Sbjct: 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL 74
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R +REKL++TV+S+F GKL+ILINN KPT+D TAED S STN ES +HLSQLA
Sbjct: 75 RPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLA 134
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
HPL KASG G+I+F+SS+ GV S+Y A KGA+NQL +NLACEWA D IR N VAP
Sbjct: 135 HPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAP 194
Query: 181 WVIKTSMIKPF 191
VI T + +
Sbjct: 195 AVIATPLAEAV 205
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260 | Back alignment and structure |
|---|
Score = 193 bits (494), Expect = 1e-62
Identities = 68/191 (35%), Positives = 102/191 (53%), Gaps = 2/191 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVT T GIG A LA+ GA V SR Q +D + + +G VTG+VC +
Sbjct: 16 VALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKA 75
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E RE+L+ ++ G ++IL++NAA+ F +D T E + N ++ +++
Sbjct: 76 EDRERLVAMAVNLH-GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAV 134
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + G GS++ +SSVG P++ Y K A+ LTKNLA E A NIR N +AP
Sbjct: 135 VPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAP 194
Query: 181 WVIKTSMIKPF 191
+IKT+ +
Sbjct: 195 GLIKTNFSQVL 205
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 7e-59
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 10/191 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +GIG TV+ L GA V +R + L + + DL
Sbjct: 9 RALVTGAGKGIGRDTVKALHASGAKVVAVTRTN----SDLVSLAKECPGIEPVCVDLGDW 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ EK + + G +++L+NNAA+ ++P +++T E S N SVF +SQ+
Sbjct: 65 DATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVA 119
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
G GSIV +SS+ P++ Y + KGAM LTK +A E IR N+V P
Sbjct: 120 RDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP 179
Query: 181 WVIKTSMIKPF 191
V+ T M K
Sbjct: 180 TVVLTDMGKKV 190
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244 | Back alignment and structure |
|---|
Score = 183 bits (467), Expect = 1e-58
Identities = 65/191 (34%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTG +GIG TV+ L GA V SR Q +LD+ + E + DL
Sbjct: 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE----CPGIEPVCVDLGDW 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E E+ + +V G +++L+NNAA+A ++P +++T E N +V +SQ+
Sbjct: 65 EATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVA 119
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A G G+IV +SS R + + S+Y + KGA++ LTK +A E IR N V P
Sbjct: 120 RGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP 179
Query: 181 WVIKTSMIKPF 191
V+ TSM +
Sbjct: 180 TVVMTSMGQAT 190
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281 | Back alignment and structure |
|---|
Score = 182 bits (464), Expect = 1e-57
Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 5/194 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA---RLHEWKNKGFKVTGSVCDL 58
T LVTGG GIG L GA V RN +L L G + D+
Sbjct: 13 TYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDI 72
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLS 117
++ ++ + ++ VT+ G+L+ +++ A + + P + +E N ++
Sbjct: 73 TNEDETARAVDAVTAWH-GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVL 131
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+ A G GS V ISS+ YG K A++ L + A E +R N+
Sbjct: 132 KHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNS 191
Query: 178 VAPWVIKTSMIKPF 191
+ P +I+T ++
Sbjct: 192 IRPGLIRTDLVAAI 205
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263 | Back alignment and structure |
|---|
Score = 180 bits (459), Expect = 3e-57
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 2/191 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
A++TG + GIG A E A+ GA + +R L K K G +V D+++
Sbjct: 9 VAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT 68
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E + ++E+V S F G +IL+NNA + ++ E + L++
Sbjct: 69 PEGVDAVVESVRSSF-GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGL 127
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P +A G G+I+ +S+ V+ + +Y K A+ +K LA E KDNIR N + P
Sbjct: 128 VPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINP 187
Query: 181 WVIKTSMIKPF 191
+I T
Sbjct: 188 GLILTPDWIKT 198
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255 | Back alignment and structure |
|---|
Score = 179 bits (458), Expect = 4e-57
Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 2/191 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTG RG+G A E LA GA V L + KG+ G D++
Sbjct: 11 TALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDE 70
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + + ++ILINNA I + KP V++ E+ V TN S F +S+ A
Sbjct: 71 LAIEAAFSKLDAEG-IHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAA 129
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A + G I+ I S+ P+V+ Y A KG + LT ++A EWA+ NI+TN + P
Sbjct: 130 KRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGP 189
Query: 181 WVIKTSMIKPF 191
I T M
Sbjct: 190 GYILTDMNTAL 200
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265 | Back alignment and structure |
|---|
Score = 178 bits (455), Expect = 1e-56
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE--WKNKGFKVTGSVCDLS 59
A+VTGG+ GIG ATVE L GA V C+R+ L A + G ++ SVCD+
Sbjct: 10 VAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL 69
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
Q E G +IL+NNA V + T E S F SV H +
Sbjct: 70 DALQVRAFAEACERTL-GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRA 128
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P ++ + +IV ++S+ + P + A + + L +++A E+A +R N +
Sbjct: 129 FLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGIL 188
Query: 180 PWVIKTSMIK 189
++++ +
Sbjct: 189 IGLVESGQWR 198
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 1e-56
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TG GIG A GA V N + + E + G + CD++S
Sbjct: 13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE 72
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ L + S GK++IL+NNA KP D+ D N S FHLSQL
Sbjct: 73 QELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVA 130
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + +G G I+ I+S+ +++ Y + K A + L +N+A + + NIR N +AP
Sbjct: 131 PEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPG 190
Query: 182 VIKTSMIKPF 191
I T +K
Sbjct: 191 AILTDALKSV 200
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302 | Back alignment and structure |
|---|
Score = 179 bits (457), Expect = 2e-56
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
A +TGG G+G L+ GA SR L A + ++ G KV CD+
Sbjct: 28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD 87
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ-L 119
+ + + + + G NI+INNAA F+ PT ++ T++ ++ +
Sbjct: 88 PDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 146
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
L KA + + I+++ G V + K + ++K+LA EW K +R N +
Sbjct: 147 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 206
Query: 180 PWVIKTSM 187
P IKT
Sbjct: 207 PGPIKTKG 214
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 2e-56
Identities = 55/192 (28%), Positives = 83/192 (43%), Gaps = 3/192 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLSS 60
AL+TG T+GIG A GA + R+ ELDA + G V DL+
Sbjct: 22 RALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE 81
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ +L F G L++L+NNA I+ +P VD + + N + L+
Sbjct: 82 PDAPAELARRAAEAF-GGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAV 140
Query: 121 HPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A+G G+I+ ++S + +P Y K + TK LA E IR N+V
Sbjct: 141 GKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVC 200
Query: 180 PWVIKTSMIKPF 191
P V+ T M +
Sbjct: 201 PTVVLTEMGQRV 212
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273 | Back alignment and structure |
|---|
Score = 177 bits (452), Expect = 4e-56
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 3/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TA+VTG GIG A AR GA V R + E + G V DL+
Sbjct: 33 TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADL 91
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + E + + ++++L+NNA I P +++ V + N ++ + LS+
Sbjct: 92 EGAANVAEELAAT--RRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFG 149
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
A G+G IV I+S+ +G +V+ Y A K A+ LT+ LA EWA + N +AP
Sbjct: 150 TAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPG 209
Query: 182 VIKTSMIKPF 191
+ T+
Sbjct: 210 YVVTANTAAL 219
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277 | Back alignment and structure |
|---|
Score = 177 bits (451), Expect = 7e-56
Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 2/187 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
A +TGG GIG E R G SR+ + + G + D+ +
Sbjct: 29 VAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA 88
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
++ F G+++ILIN AA F+ P ++ TV + F++S++
Sbjct: 89 PPAVMAAVDQALKEF-GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVL 147
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ F G IV I++ G RG G+ K A++ +T++LA EW NIR N++AP
Sbjct: 148 YEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAP 207
Query: 181 WVIKTSM 187
I +
Sbjct: 208 GPISGTE 214
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 2e-55
Identities = 65/188 (34%), Positives = 95/188 (50%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
ALVTGG+RG+G + LA G V SRN E + K G + CD+S+
Sbjct: 23 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 82
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E+ +KL+E V F GKL+ ++N A I P + ++ V N +++ + A
Sbjct: 83 YEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREA 141
Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
L + S N SI+ I S+ +P++S Y A KG + LTK LA EW + IR N +A
Sbjct: 142 FSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIA 201
Query: 180 PWVIKTSM 187
P +T M
Sbjct: 202 PGWYRTKM 209
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264 | Back alignment and structure |
|---|
Score = 174 bits (444), Expect = 6e-55
Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 3/202 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+++G +G A GA + +R L+ + + G + D++
Sbjct: 13 VVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDD 72
Query: 62 EQREKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
Q L++ + G+++++INNA + +KP + T E M L Q
Sbjct: 73 AQVAHLVDETMKAY-GRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGF 131
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + S G++V ++S+ Y K A+ +++ LA E + IR N+V P
Sbjct: 132 TPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLP 190
Query: 181 WVIKTSMIKPFEVLSVGIKGRQ 202
I +K + G G
Sbjct: 191 GYIWGGTLKSYFEHQAGKYGTS 212
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257 | Back alignment and structure |
|---|
Score = 173 bits (442), Expect = 9e-55
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
++TGG+ G+G A+ GA V R + +L+ E + ++ D+ +
Sbjct: 8 VVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNT 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ +K+IE + F G+++ILINNAA F+ P D++ ++V + F+ SQ
Sbjct: 68 DDIQKMIEQIDEKF-GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIG 126
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVA 179
+ G G+I+ + + P V A K + +TK LA EW K IR N +A
Sbjct: 127 KYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIA 186
Query: 180 PWVIKTSM 187
P I+ +
Sbjct: 187 PGPIERTG 194
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 2e-54
Identities = 53/191 (27%), Positives = 87/191 (45%), Gaps = 4/191 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTGG + IG A V LA GA V ++ + + + +G V+ V D+++
Sbjct: 15 VAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNT 74
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVK-PTVDITAEDMSTVSSTNFESVFHLSQLA 120
E + + +V G+++IL+ A I + D+T N +F Q
Sbjct: 75 ESVQNAVRSVHEQE-GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAV 133
Query: 121 HPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
+ G IV I S+ G+ + Y A K ++Q ++LA EWA IR N V
Sbjct: 134 GRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAV 193
Query: 179 APWVIKTSMIK 189
AP I+T++ +
Sbjct: 194 APTYIETTLTR 204
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 1e-53
Identities = 61/191 (31%), Positives = 90/191 (47%), Gaps = 7/191 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-----RLHEWKNKGFKVTGSVC 56
A+VTGG GIG A V+EL G+ V SR L + + + K +V C
Sbjct: 20 VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 79
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
++ + E+ L+++ F GK+N L+NN F+ P I+++ V TN F++
Sbjct: 80 NIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 138
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+ + + GSIV I G P GA + + LTK+LA EWA IR N
Sbjct: 139 CKAVYSSWMKEHGGSIVNIIVP-TKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRIN 197
Query: 177 TVAPWVIKTSM 187
VAP VI +
Sbjct: 198 CVAPGVIYSQT 208
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 2e-53
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 2/202 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTG IG AT LA G + N+ L+ + KG + VCD++S
Sbjct: 9 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E +++V F GK++ L NNA P D ++D + V + N FH+ +
Sbjct: 69 EAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAV 127
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
G IV +S+ GV+G P+++ YG KGA+ LT+ A + A NIR N ++P
Sbjct: 128 SRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISP 187
Query: 181 WVIKTSMIKPFEVLSVGIKGRQ 202
+ + +V G Q
Sbjct: 188 GYMGPGFMWERQVELQAKVGSQ 209
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254 | Back alignment and structure |
|---|
Score = 169 bits (431), Expect = 4e-53
Identities = 54/192 (28%), Positives = 79/192 (41%), Gaps = 6/192 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A VTG GIG A GA + R LD E V D++
Sbjct: 13 CAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE--LGAAVAARIVADVTDA 70
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E ++ ++IL+N+A IA + ++ V + N + +F S+
Sbjct: 71 EAMTAAAAEAEAV--APVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFG 128
Query: 122 PLFKASGNGSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A G G+IV + S+ G S Y A KGA++QLT+ LA EWA +R N +A
Sbjct: 129 RAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALA 188
Query: 180 PWVIKTSMIKPF 191
P + T M
Sbjct: 189 PGYVATEMTLKM 200
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 6e-53
Identities = 64/190 (33%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG GIG A A+ GA V +A + G K G C+++
Sbjct: 14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE 73
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ RE +I+ F GK+ +L+NNA KP D+ D N S+F LSQLA
Sbjct: 74 QHREAVIKAALDQF-GKITVLVNNAGGGGPKP-FDMPMSDFEWAFKLNLFSLFRLSQLAA 131
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + +G G+I+ ISS+ G ++ YG+ K A+N LT+N+A + IR N +AP
Sbjct: 132 PHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPG 191
Query: 182 VIKTSMIKPF 191
IKT +
Sbjct: 192 AIKTDALATV 201
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 9e-53
Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 2/191 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTG GIG A ++ A +IV + L+ + E + G +V G D+S +
Sbjct: 9 VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKK 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ E+ + + ++++L NNA I V P +++ E V + N S F+ S+
Sbjct: 69 KDVEEFVRRTFETY-SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAV 127
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P+ G G IV +S+ G+RG + + Y K + LT+++A + IR V P
Sbjct: 128 IPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLP 187
Query: 181 WVIKTSMIKPF 191
+KT++
Sbjct: 188 GTVKTNIGLGS 198
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 2e-52
Identities = 56/190 (29%), Positives = 81/190 (42%), Gaps = 6/190 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+V GGT G+G ATV L GA V RN+ + E G +V D++
Sbjct: 10 KAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE---FGPRVHALRSDIADL 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ L G +++L NA ++ ++P ++ + N + F Q
Sbjct: 67 NEIAVLGAAAGQTL-GAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLT 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL + G SIVF SSV G P +S+Y A K A+ LA E IR N+V+P
Sbjct: 126 PLIREGG--SIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPG 183
Query: 182 VIKTSMIKPF 191
I T
Sbjct: 184 FIDTPTKGVA 193
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 2e-52
Identities = 61/190 (32%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTGG GIG AT E A+ GA V N+ +E G K G D+SS
Sbjct: 29 VCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IGSKAFGVRVDVSSA 85
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ E ++E T+ + G++++L+NNA V I E + S N + +F S+
Sbjct: 86 KDAESMVEKTTAKW-GRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVI 144
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P+ + +G GSI+ +S I + Y A KGA++ LT+ +A + AK+ IR N VAP
Sbjct: 145 PVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPG 204
Query: 182 VIKTSMIKPF 191
I +
Sbjct: 205 TIDSPYFTKI 214
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278 | Back alignment and structure |
|---|
Score = 168 bits (428), Expect = 2e-52
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 10/198 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
A++TG + GIG AT AR GA V R+ L+ + G V V D+
Sbjct: 8 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 67
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVF 114
++ +++++ T F GKL+IL+NNA A K + E + N SV
Sbjct: 68 TTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126
Query: 115 HLSQLAHPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
L++ A P ++ G IV ISS+ G+ P Y K A++Q T+N A + + I
Sbjct: 127 ALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGI 185
Query: 174 RTNTVAPWVIKTSMIKPF 191
R N+++P ++ T
Sbjct: 186 RVNSISPGLVATGFGSAM 203
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297 | Back alignment and structure |
|---|
Score = 168 bits (427), Expect = 4e-52
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 8/194 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFK---VTGSVCDL 58
+ ++TG + GIG + A+ GA V RN+ L+ + G + V D+
Sbjct: 28 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 87
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHL 116
+ ++ +I T + F GK++IL+NNA T D E NF++V +
Sbjct: 88 TEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 146
Query: 117 SQLAHPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+Q + G IV +SS V G + Y K A++Q T+ A + + +R
Sbjct: 147 TQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRV 205
Query: 176 NTVAPWVIKTSMIK 189
N+V+P + T +
Sbjct: 206 NSVSPGAVATGFMG 219
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 6e-52
Identities = 55/191 (28%), Positives = 82/191 (42%), Gaps = 7/191 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGG+RGIG + L GA V C+R+ G DLSS
Sbjct: 31 IALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSE 89
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+L + + + +L+IL+NNA ++ V N SVF Q
Sbjct: 90 AGARRLAQALGELS-ARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLL 148
Query: 122 PLFKASGN----GSIVFISSVGGVRGIP-SVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
PL + S + ++ I SV G+ + YG K A++QL++ LA E ++I N
Sbjct: 149 PLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVN 208
Query: 177 TVAPWVIKTSM 187
+AP + M
Sbjct: 209 VIAPGRFPSRM 219
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277 | Back alignment and structure |
|---|
Score = 166 bits (424), Expect = 7e-52
Identities = 52/190 (27%), Positives = 82/190 (43%), Gaps = 4/190 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG GIG A LA G V + DA + G D+S
Sbjct: 31 VAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDE 87
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+Q +++ + F G ++ L+ NA + + +D T ED V + N + ++ A
Sbjct: 88 QQIIAMVDACVAAF-GGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAA 146
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P G G+IV +SS+ G + YG K + QL++ A E IR+NT+ P
Sbjct: 147 PRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPA 206
Query: 182 VIKTSMIKPF 191
+ T M +
Sbjct: 207 FVDTPMQQTA 216
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276 | Back alignment and structure |
|---|
Score = 166 bits (424), Expect = 7e-52
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 4/203 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+TG + GIG A GA V +R+ L E G K CD++
Sbjct: 34 RALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQP 93
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+Q +++ +T G ++I + NA I V+ +D+ E+ + TN VF +Q A
Sbjct: 94 DQVRGMLDQMTGEL-GGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAA 152
Query: 122 PLFKASGN-GSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
G G+I+ +S+ G VS Y K A+ LTK +A E A IR N+V
Sbjct: 153 RAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSV 212
Query: 179 APWVIKTSMIKPFEVLSVGIKGR 201
+P I+T +++P + +
Sbjct: 213 SPGYIRTELVEPLADYHALWEPK 235
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 8e-52
Identities = 50/190 (26%), Positives = 74/190 (38%), Gaps = 14/190 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTGG++GIG A VE L + Q A + DL+ +
Sbjct: 6 NYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE---------NLKFIKADLTKQ 56
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ +++ + + + NA I DI E + V N S + +
Sbjct: 57 QDITNVLDIIK---NVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLE 113
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
K SIVF S P+ Y KGA+ Q+TK+LA + AK IR NTV P
Sbjct: 114 NNLKVGA--SIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPG 171
Query: 182 VIKTSMIKPF 191
+ T + +
Sbjct: 172 TVDTDLYRNL 181
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 9e-52
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 6/190 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TG T GIG A + GA V R + LDA + E G G D ++
Sbjct: 31 IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGGGAVGIQADSANL 87
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ ++L E V + G++++L NA + P ++T E N + V Q A
Sbjct: 88 AELDRLYEKVKAEA-GRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKAL 146
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL S+V S G G P+ S+Y A K A+ +N + IR NT++P
Sbjct: 147 PLLA--RGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPG 204
Query: 182 VIKTSMIKPF 191
+T+ +
Sbjct: 205 PTETTGLVEL 214
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280 | Back alignment and structure |
|---|
Score = 166 bits (423), Expect = 1e-51
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 10/198 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
T ++TG + GIG T A+ GA V R+ L+ G +V V D+
Sbjct: 8 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 67
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFESVF 114
++ + ++++I + F GK+++L+NNA A F D + N ++V
Sbjct: 68 TTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 126
Query: 115 HLSQLAHPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
+++ P AS G IV +SS V G + P Y K A++Q T++ A + AK I
Sbjct: 127 EMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGI 185
Query: 174 RTNTVAPWVIKTSMIKPF 191
R N+V+P +++T
Sbjct: 186 RVNSVSPGMVETGFTNAM 203
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266 | Back alignment and structure |
|---|
Score = 165 bits (420), Expect = 2e-51
Identities = 59/190 (31%), Positives = 84/190 (44%), Gaps = 12/190 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG GIG A V L GA V R + A L DL
Sbjct: 30 VALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-----------HLPGDLREA 78
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ L V + G+L+I++NNA + + T D S N E+ F + + A
Sbjct: 79 AYADGLPGAVAAGL-GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAI 137
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL A+G G+IV ++S G+R P +LY K A+ LT+ + + A IR N V P
Sbjct: 138 PLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPN 197
Query: 182 VIKTSMIKPF 191
+ T M++
Sbjct: 198 EVNTPMLRTG 207
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 5e-51
Identities = 57/187 (30%), Positives = 81/187 (43%), Gaps = 2/187 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +GIG A L + G V N A E G D+S R
Sbjct: 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+Q +E G ++++NNA +A P IT E + V + N + V Q A
Sbjct: 64 DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 122
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
FK G+ G I+ S G G P +++Y + K A+ LT+ A + A I N P
Sbjct: 123 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 182
Query: 181 WVIKTSM 187
++KT M
Sbjct: 183 GIVKTPM 189
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 5e-51
Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 6/191 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV---CDL 58
LVTG RGIG A A GA V R + L + K+ G + +
Sbjct: 16 VILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLEN 75
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLS 117
++ +Q +L V F G+L+ L++NA+I P + ED V N + F L+
Sbjct: 76 ATAQQYRELAARVEHEF-GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLT 134
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW-AKDNIRTN 176
+ PL K S + SI F SS G +G + YG K A L + LA E +R N
Sbjct: 135 RALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRAN 194
Query: 177 TVAPWVIKTSM 187
++ P +T M
Sbjct: 195 SINPGATRTGM 205
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 7e-51
Identities = 55/187 (29%), Positives = 81/187 (43%), Gaps = 5/187 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+AL+TG RGIG A E R GA V + E G D++ +
Sbjct: 10 SALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAE---IGPAAYAVQMDVTRQ 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + I G L+IL+NNAA+ + P V+IT E + + N Q A
Sbjct: 67 DSIDAAIAATVEHA-GGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAA 125
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A G G I+ ++S G RG V++Y A K A+ LT++ + K I N +AP
Sbjct: 126 RQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAP 185
Query: 181 WVIKTSM 187
V+
Sbjct: 186 GVVDGEH 192
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 8e-51
Identities = 63/201 (31%), Positives = 97/201 (48%), Gaps = 5/201 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTGG++GIG A L + GA V + + A + +N GF V D++ R
Sbjct: 14 KAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EVDVTKR 70
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ ++ G ++L NA ++ ++P VDIT E+ N VF +Q+A
Sbjct: 71 ASVDAAMQKAIDAL-GGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIAC 129
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
F AS G IV +S+ G P ++ Y A K A+ T+ LA E A NIR N V P
Sbjct: 130 RHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCP 189
Query: 181 WVIKTSMIKPFEVLSVGIKGR 201
+KT+M + + ++G
Sbjct: 190 GFVKTAMQEREIIWEAELRGM 210
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 8e-51
Identities = 58/193 (30%), Positives = 82/193 (42%), Gaps = 4/193 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+TG GIG AT LA G V R + E++ E G + D+S
Sbjct: 30 VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
Q + + F G L+I++ NA I P D+ + + N F L
Sbjct: 90 LQMRNAVRDLVLKF-GHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLT 148
Query: 121 HPLFKASGNGSIVFISSVGGVR--GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
P K G G+IV +SS+ G R P + Y A K A + + LA E K +IR N V
Sbjct: 149 VPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAV 208
Query: 179 APWVIKTSMIKPF 191
P I+T++
Sbjct: 209 CPGAIETNISDNT 221
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258 | Back alignment and structure |
|---|
Score = 163 bits (415), Expect = 9e-51
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 4/189 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
A+VTGG +GIG E+LA G V + + + + + K D++
Sbjct: 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT 63
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ + I+ G ++L+NNA IA +KP +++T ED+ + S N SVF Q
Sbjct: 64 DKANFDSAIDEAAEKL-GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQA 122
Query: 120 AHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A F G G I+ +S+ ++G P +S Y K A+ LT+ A E A N
Sbjct: 123 ASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAY 182
Query: 179 APWVIKTSM 187
AP ++ T M
Sbjct: 183 APGIVGTGM 191
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 2e-50
Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 12/191 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGG+RGIG A E L G V SRN E DL +
Sbjct: 4 KALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ--------SLGAVPLPTDLE-K 54
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + L++ G L++L++ AA+ KP ++++ E+ V + + F L+Q A
Sbjct: 55 DDPKGLVKRALEAL-GGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAA 113
Query: 122 PLFKASGNGSIVFISSVGG--VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P +G G ++FI SV G + Y K A+ LT+ LA EWA+ IR N +
Sbjct: 114 PHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLC 173
Query: 180 PWVIKTSMIKP 190
P ++T P
Sbjct: 174 PGYVETEFTLP 184
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 2e-50
Identities = 57/190 (30%), Positives = 80/190 (42%), Gaps = 4/190 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T ++TGG RG+G + GA V E A E G D++
Sbjct: 7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE---LGDAARYQHLDVTIE 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E ++++ F G ++ L+NNA I+ + E V N VF +
Sbjct: 64 EDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVI 122
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P K +G GSIV ISS G+ G+ S YGA K + L+K A E D IR N+V P
Sbjct: 123 PAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG 182
Query: 182 VIKTSMIKPF 191
+ T M
Sbjct: 183 MTYTPMTAET 192
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 3e-50
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 7/190 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTGG RGIG A + AR GA+V C + + DL
Sbjct: 8 GVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA------EAIGGAFFQVDLEDE 61
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+R + +E G++++L+NNAAIA + + + V N + HLS LA
Sbjct: 62 RERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAA 120
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+ G G+IV ++SV G+ + Y A KG + LT++LA + A IR N VAP
Sbjct: 121 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPG 180
Query: 182 VIKTSMIKPF 191
I T +
Sbjct: 181 AIATEAVLEA 190
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271 | Back alignment and structure |
|---|
Score = 162 bits (413), Expect = 3e-50
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 6/192 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TG GIG T LAR GA V + +L G V DL++
Sbjct: 13 VAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAAS---VGRGAVHHVVDLTNE 69
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVK--PTVDITAEDMSTVSSTNFESVFHLSQL 119
LI+ F G+L+I+ NNAA + +T + + N + +
Sbjct: 70 VSVRALIDFTIDTF-GRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKY 128
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P ++G G+IV ISS + Y K A+ LT+ +A ++ + +R N +A
Sbjct: 129 AIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIA 188
Query: 180 PWVIKTSMIKPF 191
P +++T ++
Sbjct: 189 PGLVRTPRLEVG 200
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 162 bits (412), Expect = 6e-50
Identities = 56/192 (29%), Positives = 73/192 (38%), Gaps = 3/192 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG + GIG A AR GA V +RN L E G + D+
Sbjct: 10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDE 69
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E L+E F G L+ NNA + ++ E TN S F ++
Sbjct: 70 ALHEALVELAVRRF-GGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQ 128
Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P A G GS+ F SS G G V+ Y A K + L + LA E IR N +
Sbjct: 129 VPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALL 188
Query: 180 PWVIKTSMIKPF 191
P T
Sbjct: 189 PGGTDTPANFAN 200
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 161 bits (411), Expect = 6e-50
Identities = 63/194 (32%), Positives = 91/194 (46%), Gaps = 4/194 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLS 59
L+TGG G+G AT LA GA + + L+A +V +V D+S
Sbjct: 15 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 74
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
Q E + T F G+++ NNA I PT TA + V S N VF +
Sbjct: 75 DEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 133
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
+ + G+G +V +SVGG+RGI + S Y A K + LT+N A E+ + IR N +
Sbjct: 134 KVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAI 193
Query: 179 APWVIKTSMIKPFE 192
AP I T M++
Sbjct: 194 APGAIWTPMVENSM 207
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 8e-50
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTGG RGIG V GA V C ++ ++ + + +CD++
Sbjct: 11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKD----ESGGRALEQELPGAVFILCDVTQE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ + L+ F G+L+ ++NNA + + +A+ + N + L++LA
Sbjct: 67 DDVKTLVSETIRRF-GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + S G+++ ISS+ G G Y A KGA+ +TK LA + + +R N ++P
Sbjct: 126 LPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISP 184
Query: 181 WVIKTSMIKPF 191
I T + +
Sbjct: 185 GNIWTPLWEEL 195
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 8e-50
Identities = 54/194 (27%), Positives = 77/194 (39%), Gaps = 5/194 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLSS 60
A+VTG + G G A G V + L+ W KV D++
Sbjct: 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVAD 63
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIA---FVKPTVDITAEDMSTVSSTNFESVFHLS 117
I F G +++L+NNA I E V + N +F
Sbjct: 64 EGDVNAAIAATMEQF-GAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+ P G G IV I+SV + P S Y KGA+ QLTK++A ++A IR N
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 178 VAPWVIKTSMIKPF 191
V P +I+T M +
Sbjct: 183 VCPGMIETPMTQWR 196
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269 | Back alignment and structure |
|---|
Score = 161 bits (410), Expect = 1e-49
Identities = 55/190 (28%), Positives = 93/190 (48%), Gaps = 12/190 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTGG+ GIG A V+ L R+GA V + S ++ +K D+++
Sbjct: 16 VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK----------IDVTNE 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E+ ++ +E T + G+++IL+NNA I P E + N + +++
Sbjct: 66 EEVKEAVEKTTKKY-GRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTI 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P+ A G+GSI+ I+SV + + Y K A+ LT+++A ++A IR N V P
Sbjct: 125 PVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCPG 183
Query: 182 VIKTSMIKPF 191
I T M+
Sbjct: 184 TIMTPMVIKA 193
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254 | Back alignment and structure |
|---|
Score = 160 bits (406), Expect = 2e-49
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 12/192 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDL 58
LVTG +RGIG + V+ L +V+ +R++ A L + K K G + V D+
Sbjct: 4 VILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSE----APLKKLKEKYGDRFFYVVGDI 59
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLS 117
+ ++L+ GK++ L+ NA + V+ +I + NF S+ L
Sbjct: 60 TEDSVLKQLVNAAVKGH-GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+A P K + G++VF+SS S YG+ K A+N LA E + ++
Sbjct: 119 GIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIA 175
Query: 178 VAPWVIKTSMIK 189
VAP ++ T M
Sbjct: 176 VAPGIVDTDMQV 187
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258 | Back alignment and structure |
|---|
Score = 159 bits (405), Expect = 3e-49
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 2/187 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG +RG+G A LA G IV +R++ E + G KV ++
Sbjct: 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQ 65
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ +++ + + F G+L++ +NNAA ++P +++ + N +++ +Q A
Sbjct: 66 PAKIKEMFQQIDETF-GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEA 124
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
L + +G G IV ISS+G +R + + + G K A+ LT+ LA E + I N V+
Sbjct: 125 AKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSG 184
Query: 181 WVIKTSM 187
I T
Sbjct: 185 GAIDTDA 191
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279 | Back alignment and structure |
|---|
Score = 160 bits (407), Expect = 3e-49
Identities = 51/193 (26%), Positives = 82/193 (42%), Gaps = 6/193 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A VTG + GIG A E A+ GA V + + H K G C++S
Sbjct: 36 VASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDP 95
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTV--DITAEDMSTVSSTNFESVFHLSQL 119
+ E+ I F G +++ + NA + + + + + + S + V++ S
Sbjct: 96 KSVEETISQQEKDF-GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHN 154
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+FK +G GS++ SS+ G + Y K A L K+LA EWA R NT
Sbjct: 155 IGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAP-FARVNT 213
Query: 178 VAPWVIKTSMIKP 190
++P I T +
Sbjct: 214 ISPGYIDTDITDF 226
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 4e-49
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TGGT GIG A + GA V R+ + ++ D S
Sbjct: 8 VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ KL + F G ++ L+NNA IA K + T + + + N + VF ++L
Sbjct: 67 DGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI 125
Query: 122 PLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNTV 178
K G G SI+ +SS+ G G PS+ Y A KGA+ ++K+ A + A ++R NTV
Sbjct: 126 QRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV 185
Query: 179 APWVIKTSMIKPF 191
P IKT ++
Sbjct: 186 HPGYIKTPLVDDL 198
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 6e-49
Identities = 41/187 (21%), Positives = 69/187 (36%), Gaps = 8/187 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TA+VT G + L+ G V + + D + F T S
Sbjct: 3 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSE 56
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
++ +LIE VTS + G++++L++N A +P ED F L
Sbjct: 57 QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
K +G I+FI+S +S Y + + L L+ E + NI + P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175
Query: 181 WVIKTSM 187
+ +
Sbjct: 176 NYLHSED 182
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 7e-49
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
++TG ++GIG V V SR+ + D+S
Sbjct: 30 VVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS---------ADPDIHTVAGDISKP 80
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E ++++ F G+++ L+NNA + KP V++T ED N FH++Q A
Sbjct: 81 ETADRIVREGIERF-GRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAA 139
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVS--LYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
G+G IV I++ + + + L KG +N +T++LA E+++ +R N V+
Sbjct: 140 AEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVS 199
Query: 180 PWVIKTSMIKP 190
P VIKT M
Sbjct: 200 PGVIKTPMHPA 210
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 9e-49
Identities = 47/190 (24%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--NKGFKVTGSVCDLS 59
A+VT G+ G+G A+ ELAR GA + SRN+ +L+A G +V D+
Sbjct: 9 LAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIR 68
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
++L E + G +IL+ + +++ ED S + +
Sbjct: 69 EPGDIDRLFEKARDL--GGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRR 126
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A G G +V+I SV +R ++L + + + + LA E A + N V
Sbjct: 127 AAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVL 186
Query: 180 PWVIKTSMIK 189
P +I T ++
Sbjct: 187 PSLILTDRVR 196
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260 | Back alignment and structure |
|---|
Score = 158 bits (402), Expect = 1e-48
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 4/191 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALV+GG RG+G + V + GA V E A E D++
Sbjct: 9 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLDVTQP 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
Q + ++T + F G L++L+NNA I + D + + N VF +
Sbjct: 66 AQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
K +G GSI+ ISS+ G+ G + Y A K A+ LTK+ A E IR N++ P
Sbjct: 125 KPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG 184
Query: 182 VIKTSMIKPFE 192
++KT M
Sbjct: 185 LVKTPMTDWVP 195
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 1e-48
Identities = 62/188 (32%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTG T GIG + LAR GA + E G K DLS
Sbjct: 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALA--EIARHGVKAVHHPADLSDV 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
Q E L F G ++IL+NNA I V P E + + N +VFH ++LA
Sbjct: 64 AQIEALFALAEREF-GGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLAL 122
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P +A G I+ I+SV G+ G + Y A K + LTK + E A N+ N + P
Sbjct: 123 PGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPG 182
Query: 182 VIKTSMIK 189
+ T +++
Sbjct: 183 WVLTPLVQ 190
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 2e-48
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 6/190 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSV---CDL 58
LVTG + GIG AR+GA V RN+ +L + +
Sbjct: 14 IILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLT 73
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLS 117
+ E ++L + + + +L+ +++NA + V P + + V N + F L+
Sbjct: 74 CTSENCQQLAQRIAVNY-PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLT 132
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
Q PL S GS+VF SS G +G + Y A K A + + LA E+ + +R N
Sbjct: 133 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RLRVNC 191
Query: 178 VAPWVIKTSM 187
+ P +T+M
Sbjct: 192 INPGGTRTAM 201
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 2e-48
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 7/192 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFK--VTGSVCDLS 59
TALVTG T GIG A L GA V R + ++ + E + + + V DL
Sbjct: 12 TALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG 71
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ + + +IE K++ILINN I DI ED + N S L++
Sbjct: 72 TEQGCQDVIEKY-----PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRS 126
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
G ++FI+S + ++ Y A K L+++LA N+ NT+
Sbjct: 127 YLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIM 186
Query: 180 PWVIKTSMIKPF 191
P T ++
Sbjct: 187 PGSTLTEGVETM 198
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261 | Back alignment and structure |
|---|
Score = 157 bits (400), Expect = 2e-48
Identities = 53/195 (27%), Positives = 85/195 (43%), Gaps = 9/195 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+TG G G + A+ GA V R++ + E G D+S
Sbjct: 11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKE 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ +E S F GK++IL+NNA I + + E+ + N V+ ++
Sbjct: 68 ADVDAAVEAALSKF-GKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKL 126
Query: 121 HPLFKASGNGS----IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
P FK +G I+ ++S G R P+++ Y A KG + +TK LA E A IR
Sbjct: 127 IPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVV 186
Query: 177 TVAPWVIKTSMIKPF 191
+ P +T ++ F
Sbjct: 187 ALNPVAGETPLLTTF 201
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 4e-48
Identities = 44/186 (23%), Positives = 66/186 (35%), Gaps = 5/186 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTG G+G A L G V R L + G V G V DL+
Sbjct: 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL---GNAVIGIVADLAHH 61
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + G ++++ A P TAE + V +N S ++Q
Sbjct: 62 EDVDVAFAAAVEWG-GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTV 120
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
L G G + + S G + SLY A K M ++L E +R + P
Sbjct: 121 RLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPS 179
Query: 182 VIKTSM 187
I++
Sbjct: 180 GIRSEF 185
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259 | Back alignment and structure |
|---|
Score = 156 bits (397), Expect = 5e-48
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 2 TALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVC 56
++TG +RG G A +LAR G+++ +R++ L + KV +
Sbjct: 8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67
Query: 57 DLSSREQREKLIETVTSIFQ---GKLNILINNAAIAF---VKPTVDITAEDMSTVSSTNF 110
DL + ++L+ V + + + +LINNAA +++ + N
Sbjct: 68 DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127
Query: 111 ESVFHLSQLAHPLFKASGN--GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
S+ L+ F+ S ++V ISS+ ++ LY A K A + L + LA E
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE- 186
Query: 169 AKDNIRTNTVAPWVIKTSM 187
+ ++R + AP + M
Sbjct: 187 -EPSVRVLSYAPGPLDNDM 204
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 157 bits (399), Expect = 5e-48
Identities = 54/189 (28%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE--WKNKGFKVTGSVCDLS 59
TA++TG T GIG A LA+ GA + + + + V D++
Sbjct: 27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT 86
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ ++ V F G +IL+NNA + FV+ D E + + N S FH +
Sbjct: 87 KPSEIADMMAMVADRF-GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRG 145
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P K G G I+ I+S G+ P S Y A K + LTK +A E A+ + N++
Sbjct: 146 AIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSIC 205
Query: 180 PWVIKTSMI 188
P + T ++
Sbjct: 206 PGYVLTPLV 214
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 1e-47
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTG + GIG A E G+ V S + K CD+++
Sbjct: 10 VVIVTGASMGIGRAIAERFVDEGSKVIDLSIHD-----------PGEAKYDHIECDVTNP 58
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+Q + I+ + + G +++L+NNA I ++ + + N ++ S+ A
Sbjct: 59 DQVKASIDHIFKEY-GSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAI 117
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P S + SIV ISSV + S Y K A+ LTK++A ++A +R N V P
Sbjct: 118 PYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAP-LLRCNAVCPA 176
Query: 182 VIKTSMIKPF 191
I T +++
Sbjct: 177 TIDTPLVRKA 186
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 1e-47
Identities = 31/193 (16%), Positives = 61/193 (31%), Gaps = 18/193 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LV GG+ +G V+ + + S
Sbjct: 24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHSFT------------IKDSGE 71
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E+ + +IE + S K++ + A + + D + + + N S F + +
Sbjct: 72 EEIKSVIEKINSKS-IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIG 130
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNTV 178
L G V + + + YGA K A + + K+LA E + +
Sbjct: 131 AKLLN--QGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGI 188
Query: 179 APWVIKTSMIKPF 191
P + T + +
Sbjct: 189 LPVTLDTPTNRKY 201
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281 | Back alignment and structure |
|---|
Score = 155 bits (395), Expect = 2e-47
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 11/195 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+TGG G+G A V+ GA V ++ L G G V D+ S
Sbjct: 7 VALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGDVRSL 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST-----VSSTNFESVFHL 116
+ +++ E + F GK++ LI NA I + ED + N + H
Sbjct: 64 QDQKRAAERCLAAF-GKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHA 122
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+ P +S GS+VF S G LY A K A+ L + +A E A ++R N
Sbjct: 123 VKACLPALVSSR-GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAP-HVRVN 180
Query: 177 TVAPWVIKTSMIKPF 191
VAP + T + P
Sbjct: 181 GVAPGGMNTDLRGPS 195
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 3e-47
Identities = 61/195 (31%), Positives = 90/195 (46%), Gaps = 10/195 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL-HEWKNKGFKVTGSVCDLSS 60
T +VTGG RGIG A +A GA V R+ + K G K CD+S+
Sbjct: 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 75
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ K I+ + + G ++ LI NA ++ VKP ++T ED + V N VF+ +
Sbjct: 76 TDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAV 134
Query: 121 HPLF-KASGNGSIVFISSVGG-------VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
L+ + GSIV SS+ + G + Y + K A + L K LA EWA
Sbjct: 135 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG 194
Query: 173 IRTNTVAPWVIKTSM 187
IR N ++P + T
Sbjct: 195 IRVNALSPGYVNTDQ 209
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 3e-47
Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 10/197 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE---LDARLH----EWKNKGFKVTGS 54
T ++GG+RGIG A + +A GA V +++ L ++ E + G +
Sbjct: 11 TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI 70
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
V D+ + + F G ++I +NNA+ + ++ + ++ +
Sbjct: 71 VGDIRDGDAVAAAVAKTVEQF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTY 129
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
+SQ P K N I+ +S + + Y K M +A E I
Sbjct: 130 AVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDAGI 189
Query: 174 RTNTVAP-WVIKTSMIK 189
+NT+ P + T+ ++
Sbjct: 190 ASNTLWPRTTVATAAVQ 206
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 4e-47
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
++TG + G+G + A A +V + E ++ L E K G + D++
Sbjct: 9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
L+++ F GKL+++INNA + + +++ D + V TN F S+ A
Sbjct: 69 ESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 121 HPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
F + G+++ +SSV P Y A KG M +T+ LA E+A IR N +
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187
Query: 180 PWVIKTSMIK 189
P I T +
Sbjct: 188 PGAINTPINA 197
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262 | Back alignment and structure |
|---|
Score = 154 bits (392), Expect = 4e-47
Identities = 52/187 (27%), Positives = 86/187 (45%), Gaps = 2/187 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG +RGIG A +L GA V +R+ +L A E G + CDLS
Sbjct: 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHS 90
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ V + G+ ++L+NNA + F P + + + + N ++ + L +
Sbjct: 91 DAIAAFATGVLAAH-GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAF 149
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P A+ G I+ ISS+ G + + Y A K +N L + A E + +R + VAP
Sbjct: 150 APAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAP 209
Query: 181 WVIKTSM 187
++T
Sbjct: 210 GSVRTEF 216
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274 | Back alignment and structure |
|---|
Score = 154 bits (391), Expect = 6e-47
Identities = 45/200 (22%), Positives = 77/200 (38%), Gaps = 11/200 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV-------HTCSRNQIELDARLHEWKNKGFKVTGS 54
T +TG +RGIG A AR GA V + + + G +
Sbjct: 8 TLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL 67
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
CD+ +Q + F G ++IL+NNA+ +++ T+D + + N F
Sbjct: 68 KCDIREEDQVRAAVAATVDTF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSF 126
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
+Q P + N I+ ++ + + + Y K M+ +T LA E+
Sbjct: 127 VCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGPQG 186
Query: 173 IRTNTVAP-WVIKTSMIKPF 191
+ N + P VI T I
Sbjct: 187 VAINALWPRTVIATDAINML 206
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 6e-47
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TGG GIG A E A GA + +N G +V CD+S
Sbjct: 9 LAVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNLGRRVLTVKCDVSQP 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + V S F G+ +IL+NNA I + P ++T E N +S F +++
Sbjct: 67 GDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 125
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P K +G G I+ ++S I + + Y + K A T+ LA + KD I N +AP
Sbjct: 126 PGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 185
Query: 182 VIKTSMIK 189
+++T+ +
Sbjct: 186 LVRTATTE 193
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 6e-47
Identities = 54/191 (28%), Positives = 76/191 (39%), Gaps = 7/191 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTG GIG A E LAR GA V N +A + G D+S
Sbjct: 11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDP 70
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFV---KPTVDITAEDMSTVSSTNFESVFHLSQ 118
E + + + + F G ++ L+NNAAI + I E S N + ++
Sbjct: 71 ESAKAMADRTLAEF-GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTR 129
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
+ G G+IV SS YG K +N LT+ L+ E NIR N +
Sbjct: 130 AVYKKMTKRGGGAIVNQSSTAAWLYSNY---YGLAKVGINGLTQQLSRELGGRNIRINAI 186
Query: 179 APWVIKTSMIK 189
AP I T +
Sbjct: 187 APGPIDTEANR 197
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252 | Back alignment and structure |
|---|
Score = 153 bits (389), Expect = 6e-47
Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 3/189 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T V G IG ++ A G V RN +L + E + G ++ D +
Sbjct: 9 TVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNE 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ + + L + I N P ++ T V + F + +
Sbjct: 69 DEVTAFLNAADA--HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESA 126
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR-TNTVAP 180
L A G G I F + +RG + + + K + + +++A E NI + +
Sbjct: 127 RLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIID 186
Query: 181 WVIKTSMIK 189
+ T+ ++
Sbjct: 187 SGVDTAWVR 195
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 1e-46
Identities = 40/204 (19%), Positives = 73/204 (35%), Gaps = 10/204 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVT G A VE L + G V + + R F+ +
Sbjct: 3 IALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQ------RFESENPGTIALAE 56
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIA---FVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
++ E+L++ ++ +++N I P + D+ + L Q
Sbjct: 57 QKPERLVDATLQHG-EAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A +A+G S++FI+S G + + LYG + A L ++ A ++D I +
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175
Query: 179 APWVIKTSMIKPFEVLSVGIKGRQ 202
P P + R+
Sbjct: 176 GPNFFNNPTYFPTSDWENNPELRE 199
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 1e-46
Identities = 55/189 (29%), Positives = 79/189 (41%), Gaps = 3/189 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE--WKNKGFKVTGSVCDLS 59
A+VTG T GIG LA GA + ++ G KV DLS
Sbjct: 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E L++ G+++IL+NNA I D E + + N +VFH +
Sbjct: 66 KGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P K G G I+ I+S G+ + S Y A K + TK A E A I N +
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAIC 184
Query: 180 PWVIKTSMI 188
P ++T ++
Sbjct: 185 PGWVRTPLV 193
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 1e-46
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 8/195 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTG +RGIG +L + GA V+ R+ L E ++ G + VCD S
Sbjct: 7 VCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIA-------FVKPTVDITAEDMSTVSSTNFESVF 114
+ L E V QG+L++L+NNA K + A +++ +
Sbjct: 67 SEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHY 126
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
S L +G G IV ISS G ++ + +V YG K A ++L + A E + +
Sbjct: 127 FCSVYGARLMVPAGQGLIVVISSPGSLQYMFNVP-YGVGKAACDKLAADCAHELRRHGVS 185
Query: 175 TNTVAPWVIKTSMIK 189
++ P +++T ++K
Sbjct: 186 CVSLWPGIVQTELLK 200
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 2e-46
Identities = 47/191 (24%), Positives = 86/191 (45%), Gaps = 11/191 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
++T +GIG A AR GA V N+ +L K + V D++ +
Sbjct: 8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLDVTKK 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+Q ++ V +L++L N A +D +D + N S++ + +
Sbjct: 63 KQIDQFANEV-----ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117
Query: 122 PLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P A +G+I+ +SSV V+G+ + +Y K A+ LTK++A ++ + IR N V P
Sbjct: 118 PKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177
Query: 181 WVIKTSMIKPF 191
+ T ++
Sbjct: 178 GTVDTPSLQER 188
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 2e-46
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 11/186 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
VTG +GIG+AT GA V D + + + V D++
Sbjct: 9 NVWVTGAGKGIGYATALAFVEAGAKV-------TGFDQAFTQ---EQYPFATEVMDVADA 58
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
Q ++ + + + +L+ L+N A I + T ++ ED + N F+L Q
Sbjct: 59 AQVAQVCQRLLAET-ERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTM 117
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
F+ G+IV ++S +S YGA K A+ L ++ E A +R N V+P
Sbjct: 118 NQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPG 177
Query: 182 VIKTSM 187
T M
Sbjct: 178 STDTDM 183
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253 | Back alignment and structure |
|---|
Score = 151 bits (384), Expect = 5e-46
Identities = 60/192 (31%), Positives = 82/192 (42%), Gaps = 7/192 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGG G+G V+ L GA V N+ E G + D+SS
Sbjct: 8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSE 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ V G LN+L+NNA I ED S + N ESVF Q
Sbjct: 65 ADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGI 123
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN--IRTNTVA 179
K +G GSI+ ++SV I + Y A K A++ LT+ A K IR N++
Sbjct: 124 AAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH 182
Query: 180 PWVIKTSMIKPF 191
P I T M++
Sbjct: 183 PDGIYTPMMQAS 194
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-45
Identities = 54/194 (27%), Positives = 81/194 (41%), Gaps = 5/194 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
ALVTGG G+G + L+ G V R LDA E + G V VCD+
Sbjct: 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD 94
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+Q L V + F +L++L+NNA P ++T E + + + N F +Q
Sbjct: 95 PDQVAALFAAVRAEF-ARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQH 153
Query: 120 AHPLFKASGN--GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
A + KA G I+ S+ P+ + Y A K A+ LTK+ A + +I
Sbjct: 154 AFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQ 213
Query: 178 VAPWVIKTSMIKPF 191
+ T M
Sbjct: 214 IDIGNAATDMTARM 227
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266 | Back alignment and structure |
|---|
Score = 149 bits (379), Expect = 3e-45
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 4/191 (2%)
Query: 2 TALVTGGT-RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLS 59
LVT GIG T GA V ++ L + + G +V VCD++
Sbjct: 24 VVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT 83
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
S E + LI G+L++L+NNA + P VD+T E+ V + SV ++
Sbjct: 84 STEAVDALITQTVEKA-GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRA 142
Query: 120 AHPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A F G IV +SV G R S S Y A K + LT+ A E + +R N V
Sbjct: 143 ALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAV 202
Query: 179 APWVIKTSMIK 189
+P + + ++
Sbjct: 203 SPSIARHKFLE 213
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272 | Back alignment and structure |
|---|
Score = 149 bits (378), Expect = 6e-45
Identities = 49/193 (25%), Positives = 71/193 (36%), Gaps = 7/193 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG G+G A LA G V R L E G D++
Sbjct: 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDP 86
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ L F G++++L NNA A P D+T V TN F +Q A
Sbjct: 87 DSVRALFTATVEKF-GRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEA 145
Query: 121 HPLFKASGN--GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
+ KA G I+ S+ P + Y A K A+ LTK+ + + +I +
Sbjct: 146 FRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQI 205
Query: 179 APWVIKTSMIKPF 191
T M +
Sbjct: 206 DIGNADTPMAQKM 218
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 1e-44
Identities = 53/201 (26%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-------------IVHTCSRNQIELDARLHEWKNKG 48
A +TG RG G A +A GA V + +L + +
Sbjct: 13 VAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN 72
Query: 49 FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST 108
++ +V D ++ K+++ + G+L+I++ NA +A + DIT ED V
Sbjct: 73 RRIVAAVVDTRDFDRLRKVVDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDI 131
Query: 109 NFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
N ++ P G GSI+ ISS G++ P + Y A K A+ L + A E
Sbjct: 132 NVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAE 191
Query: 168 WAKDNIRTNTVAPWVIKTSMI 188
K +IR N+V P + T M
Sbjct: 192 LGKHSIRVNSVHPGPVNTPMG 212
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278 | Back alignment and structure |
|---|
Score = 148 bits (375), Expect = 2e-44
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 5/193 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TGG GIG T + R+GA V + + ++ CD++
Sbjct: 18 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKD 76
Query: 62 EQREKLIETVTSIFQGKLNILINNAAI--AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E L++T + GKL+I+ N + ++ ED V N F +++
Sbjct: 77 EDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKH 135
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A + + GSIVF +S+ VS Y A K A+ LT +L E + IR N V
Sbjct: 136 AARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCV 195
Query: 179 APWVIKTSMIKPF 191
+P+++ + ++
Sbjct: 196 SPYIVASPLLTDV 208
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258 | Back alignment and structure |
|---|
Score = 146 bits (372), Expect = 3e-44
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
L+TG ++GIG AT AR GA V R +D + + G DL++
Sbjct: 9 RVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT 68
Query: 61 REQREKLIETVTSIFQGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E ++L++ + F G +++LINNA + KP +I V N SV ++
Sbjct: 69 SEACQQLVDEFVAKF-GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKF 127
Query: 120 AHPLFKASGN-----GSIVFISSVGGVRG-IPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
A P A+ +++ S+ G G P LYGA K ++ + KN KD +
Sbjct: 128 ALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGV 187
Query: 174 RTNTVAPWVIKTSMIKPF 191
R N V+P + T+
Sbjct: 188 RFNIVSPGTVDTAFHADK 205
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279 | Back alignment and structure |
|---|
Score = 147 bits (373), Expect = 4e-44
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TA VTG + GIG A LA G V+ C+R+ + A + + G V GS CD++S
Sbjct: 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTST 85
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ + F G + IL+N+A T D+ + V TN VF +++
Sbjct: 86 DEVHAAVAAAVERF-GPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVL 144
Query: 122 PLFK--ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
+G G IV I+S GG +G+ + Y A K + TK++ E AK I N V
Sbjct: 145 RAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVC 204
Query: 180 PWVIKTSM 187
P ++T M
Sbjct: 205 PGYVETPM 212
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 6e-44
Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 8/193 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQIELDARLHEWKNKGFKVTGS 54
L+TG +GIG A E AR ++ SR +L+ E + +G
Sbjct: 4 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTI 63
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
D+S +L + + G ++ L+NNA + D+T ED +TN + F
Sbjct: 64 TADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTF 122
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
L+Q L + +G I FI+SV + S+Y K L + + K N+R
Sbjct: 123 FLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVR 182
Query: 175 TNTVAPWVIKTSM 187
V P + T M
Sbjct: 183 ITDVQPGAVYTPM 195
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 6e-44
Identities = 45/197 (22%), Positives = 78/197 (39%), Gaps = 12/197 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-------LDARLHEWKNKGFKVTGS 54
T +TG +RGIG A + A+ GA + ++ + E + G K
Sbjct: 47 TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPC 106
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVF 114
+ D+ +Q +E F G ++IL+NNA+ + T+D + + + + N +
Sbjct: 107 IVDVRDEQQISAAVEKAIKKF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTY 165
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
S+ P K S I+ IS + Y K M+ +A E+ K
Sbjct: 166 LASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF-KGE 224
Query: 173 IRTNTVAP-WVIKTSMI 188
I N + P I T+ +
Sbjct: 225 IAVNALWPKTAIHTAAM 241
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 9e-44
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 4/191 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG GIG T E A+ + + N+ L+ + K G KV V D S+R
Sbjct: 33 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR 92
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + V + G ++IL+NNA + + + N + F ++
Sbjct: 93 EDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 151
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA---KDNIRTNTV 178
P + +G IV ++S G +P + Y + K A K L E A ++T +
Sbjct: 152 PAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL 211
Query: 179 APWVIKTSMIK 189
P + T IK
Sbjct: 212 CPNFVNTGFIK 222
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 1e-43
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 2 TALVTG--GTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHE-WKNKGFKVTGSVCD 57
+VTG G +G+G A GA + T + + + E K G K C
Sbjct: 22 VVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQ 81
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
+ S E EKL++ V + F G+++ I NA +D + E + V + FH +
Sbjct: 82 VDSYESCEKLVKDVVADF-GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCA 140
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+ FK G GS+V +S+ G + Y K + ++LA EW R
Sbjct: 141 KAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRD-FARV 199
Query: 176 NTVAPWVIKTSM 187
N+++P I T +
Sbjct: 200 NSISPGYIDTGL 211
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 1e-43
Identities = 42/189 (22%), Positives = 77/189 (40%), Gaps = 6/189 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV---HTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
++ GG + +G T + A + + +++ + E +++G KV DL
Sbjct: 13 VIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDL 72
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
S+ E+ KL + F GK++I IN KP V+ + + + + N + + +
Sbjct: 73 SNEEEVAKLFDFAEKEF-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIK 131
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A NG I+ I++ S Y K + T+ + E K I N +
Sbjct: 132 QAAKHMNP--NGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAI 189
Query: 179 APWVIKTSM 187
AP + TS
Sbjct: 190 APGPMDTSF 198
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-43
Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 15/203 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV-------------HTCSRNQIELDARLHEWKNKG 48
A +TG RG G + LA GA + + +LD +++G
Sbjct: 17 VAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG 76
Query: 49 FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST 108
K V D+ +L+ F G+L++++ NA + ++T E TV
Sbjct: 77 RKALTRVLDVRDDAALRELVADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGV 135
Query: 109 NFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
N + + P +GN GSIV +SS G++ P Y A K + LT LA E
Sbjct: 136 NLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIE 195
Query: 168 WAKDNIRTNTVAPWVIKTSMIKP 190
+ IR N++ P+ ++T MI+P
Sbjct: 196 LGEYGIRVNSIHPYSVETPMIEP 218
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 3e-43
Identities = 40/187 (21%), Positives = 72/187 (38%), Gaps = 26/187 (13%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
M L+ G + +G A E L + A V T R+ ++ D+++
Sbjct: 4 MKILLIGASGTLGSAVKERLEK-KAEVITAGRHSGDV-----------------TVDITN 45
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ +K+ E V GK++ +++ A P ++T E + S+ +L L
Sbjct: 46 IDSIKKMYEQV-----GKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLG 100
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
GS + + I + GA+ K+ A E + IR NTV+P
Sbjct: 101 IDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRINTVSP 157
Query: 181 WVIKTSM 187
V++ S
Sbjct: 158 NVLEESW 164
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 5e-43
Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG T GIG L + G V C+R + L L E + G + G CD+ S
Sbjct: 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 83
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ E L+ V + G +++L+NNA T ++ E V TN VF +++
Sbjct: 84 PEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 142
Query: 122 PLFK--ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
G G IV I+S GG +G+ + Y A K + TK L E A+ I N V
Sbjct: 143 KAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 202
Query: 180 PWVIKTSM 187
P ++T M
Sbjct: 203 PGFVETPM 210
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 5e-43
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 7/192 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
A+VTGG RGIG LA G I T + + + E G +V DL+
Sbjct: 31 VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD 90
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVK--PTVDITAEDMSTVSSTNFESVFHLSQ 118
+ ++ V + F G+++ L+NNA IA + +D+ E+ T+ N +Q
Sbjct: 91 LSSHQATVDAVVAEF-GRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQ 149
Query: 119 LAHPLF---KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
A + SI+ I+SV V P Y K + ++ LA A+ I
Sbjct: 150 AVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGIAV 209
Query: 176 NTVAPWVIKTSM 187
V P +I++ M
Sbjct: 210 FEVRPGIIRSDM 221
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 8e-43
Identities = 58/188 (30%), Positives = 85/188 (45%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
+ +VTGGT+GIG AR GA V R+ ++DA + + KV G D+S
Sbjct: 12 SVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSD 71
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
R Q + L F G ++++ NA + P +T E ++ + + N F+ Q
Sbjct: 72 RAQCDALAGRAVEEF-GGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQAC 130
Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
ASG+G +V SS+ G + G P S YGA K A + A E A I N +
Sbjct: 131 LDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIM 190
Query: 180 PWVIKTSM 187
P I T
Sbjct: 191 PGNIMTEG 198
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 1e-42
Identities = 37/186 (19%), Positives = 70/186 (37%), Gaps = 8/186 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG ++ +G L G V R + L + D S
Sbjct: 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTEL-----RQAGAVALYGDFSCE 83
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
I+ + + L +++NA+ ++ T A++ + + S + + + ++
Sbjct: 84 TGIMAFIDLLKTQT-SSLRAVVHNASE-WLAETPGEEADNFTRMFSVHMLAPYLINLHCE 141
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL AS IV IS +G Y A K + LT + A +A ++ N +AP
Sbjct: 142 PLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA-PLVKVNGIAPA 200
Query: 182 VIKTSM 187
++
Sbjct: 201 LLMFQP 206
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 141 bits (359), Expect = 3e-42
Identities = 47/195 (24%), Positives = 76/195 (38%), Gaps = 16/195 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLS 59
ALVTG +GIG A E L GA V N + K CD++
Sbjct: 9 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 68
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
++Q V F G+L+IL+NNA + ++ N SV + L
Sbjct: 69 DQQQLRDTFRKVVDHF-GRLDILVNNAGVN--------NEKNWEKTLQINLVSVISGTYL 119
Query: 120 AHPLFKASGNGS---IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN--LACEWAKDNIR 174
G I+ +SS+ G+ + +Y A K + T++ LA +R
Sbjct: 120 GLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVR 179
Query: 175 TNTVAPWVIKTSMIK 189
N + P + T++++
Sbjct: 180 LNAICPGFVNTAILE 194
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286 | Back alignment and structure |
|---|
Score = 142 bits (361), Expect = 3e-42
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 19/205 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV----------------HTCSRNQIELDARLHEWK 45
A VTG RG G + LA+ GA + + +L K
Sbjct: 13 VAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVK 72
Query: 46 NKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMST 104
++ + D+ + + +++ G+L+I++ NA I + ED +
Sbjct: 73 GHNRRIVTAEVDVRDYDALKAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTE 131
Query: 105 VSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN 163
+ N V+ + P A G GSI+ SSVGG++ P Y A K + L +
Sbjct: 132 MIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRA 191
Query: 164 LACEWAKDNIRTNTVAPWVIKTSMI 188
E + IR N+V P +KT M+
Sbjct: 192 FGVELGQHMIRVNSVHPTHVKTPML 216
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 3e-42
Identities = 41/189 (21%), Positives = 80/189 (42%), Gaps = 5/189 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA---RLHEWKNKGFKVTGSVCDL 58
A++TG ++GIG LA G V +R++ L+ + + D+
Sbjct: 9 LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDI 68
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+ + + I+ + + G ++IL+N AA+ + ++ + N + + + +
Sbjct: 69 TDCTKADTEIKDIHQKY-GAVDILVNAAAMFMDGS-LSEPVDNFRKIMEINVIAQYGILK 126
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
+ K NG I ++S G +YG+ K A+ L ++L E A IR T+
Sbjct: 127 TVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTL 186
Query: 179 APWVIKTSM 187
P + T M
Sbjct: 187 CPGWVNTDM 195
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 3e-42
Identities = 39/195 (20%), Positives = 70/195 (35%), Gaps = 14/195 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS- 59
+ GIG T EL + R + + N +T D++
Sbjct: 7 NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ +KL++ + ++ILIN A I + + + NF + + +
Sbjct: 67 PVAESKKLLKKIFDQL-KTVDILINGAGI--------LDDHQIERTIAINFTGLVNTTTA 117
Query: 120 AHPLF---KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+ K G I I SV G I V +Y A K A+ T +LA +
Sbjct: 118 ILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAY 177
Query: 177 TVAPWVIKTSMIKPF 191
++ P + +T ++ F
Sbjct: 178 SINPGITRTPLVHTF 192
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267 | Back alignment and structure |
|---|
Score = 141 bits (359), Expect = 4e-42
Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 4/187 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
A+VTG +RGIG A LA G +V + + + + G K + D+S
Sbjct: 29 VAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD 88
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+L T F G +++L+NNA I + + V + N + F+ + A
Sbjct: 89 PAAVRRLFATAEEAF-GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREA 147
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ G I+ +S+ PS +Y A K + +T L+ E +I N VAP
Sbjct: 148 AQRLRVGG--RIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAP 205
Query: 181 WVIKTSM 187
T +
Sbjct: 206 GPTATDL 212
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317 | Back alignment and structure |
|---|
Score = 143 bits (362), Expect = 5e-42
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 14/200 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGA------------IVHTCSRNQIELDARLHEWKNKGF 49
A +TG RG G LA+ GA + + EL + + +G
Sbjct: 48 VAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR 107
Query: 50 KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
++ D+ + +++ + F G ++IL++N I+ V +T + S + TN
Sbjct: 108 RIIARQADVRDLASLQAVVDEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTN 166
Query: 110 FESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
+H + P G GS++F+SS G+RG P S Y A K + L +LA E
Sbjct: 167 LIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEV 226
Query: 169 AKDNIRTNTVAPWVIKTSMI 188
+ NIR N+V P + T M
Sbjct: 227 GRHNIRVNSVNPGAVNTEMA 246
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301 | Back alignment and structure |
|---|
Score = 142 bits (359), Expect = 6e-42
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTGG GIG AT E AR GA + +Q L+ ++ + +GF G VCD+
Sbjct: 33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHL 92
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ +L + + G ++++ +NA I P + +D V + H +
Sbjct: 93 DEMVRLADEAFRLL-GGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFL 151
Query: 122 PLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P G G I F +S G+ + YG K + L + LA E + I + + P
Sbjct: 152 PRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCP 211
Query: 181 WVIKTSMIK 189
V++T ++
Sbjct: 212 MVVETKLVS 220
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 1e-41
Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 16/191 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+V GG +G A +E + G V + + + +
Sbjct: 5 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWT 54
Query: 62 EQREKLIETVTSIFQ-GKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLSQL 119
EQ + ++E S Q +++ + A ++ + + S ++L
Sbjct: 55 EQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 114
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNT 177
A K G + + + PS+ YG K A++ LT +LA + + DN T
Sbjct: 115 ATTHLK--PGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLT 172
Query: 178 VAPWVIKTSMI 188
+ P + T M
Sbjct: 173 IMPVTLDTPMN 183
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 1e-41
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 8/192 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG +RGIG A + LA GA + + E + ++E ++ G +L S
Sbjct: 9 VALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLES 68
Query: 61 REQREKLIETVTSIFQ-----GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
E L ++ + Q K +ILINNA I + T + + S N ++ F
Sbjct: 69 LHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFF 128
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+ Q A + + I+ ISS +P Y KGA+N +T LA + I
Sbjct: 129 IIQQALSRLRDNS--RIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARGITV 186
Query: 176 NTVAPWVIKTSM 187
N + P +KT M
Sbjct: 187 NAILPGFVKTDM 198
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 3e-41
Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 14/190 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LV GG +G V+ V + + E + V +
Sbjct: 9 RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVI-------VKMTDSFTEQA 61
Query: 62 EQREKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+Q + + K++ ++ A A ++ + + + S LA
Sbjct: 62 DQVTAEVGKLLG--DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLA 119
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNTV 178
K G + + + G P + YG KGA++QL ++LA + + V
Sbjct: 120 TKHLK--EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAV 177
Query: 179 APWVIKTSMI 188
P + T M
Sbjct: 178 LPVTLDTPMN 187
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 3e-41
Identities = 50/201 (24%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV------------HTCSRNQIELDARLHEWKNKGF 49
A +TG RG G + LAR GA + +L + + + G
Sbjct: 30 VAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR 89
Query: 50 KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSST 108
++ S D+ + + ++ + G+L+I++ NAA+A + + +
Sbjct: 90 RIIASQVDVRDFDAMQAAVDDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDV 148
Query: 109 NFESVFHLSQLAHP-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
N + +++A P + GSIVF SS+GG+RG ++ Y A K ++ L + +A E
Sbjct: 149 NLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALE 208
Query: 168 WAKDNIRTNTVAPWVIKTSMI 188
NIR N V P + T M+
Sbjct: 209 LGPRNIRVNIVCPSSVATPML 229
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 4e-41
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 5/184 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG +RGIG AT L G V +R++ RL + D+
Sbjct: 7 AVLITGASRGIGEATARLLHAKGYRVGLMARDE----KRLQALAAELEGALPLPGDVREE 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + + F G+L+ L+NNA + +KP ++T E+ V TN F + A
Sbjct: 63 GDWARAVAAMEEAF-GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAV 121
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P G G+IV + S+ G + Y A K + L + + N+R V P
Sbjct: 122 PALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPG 181
Query: 182 VIKT 185
+ T
Sbjct: 182 SVDT 185
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 4e-41
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T LVTG GIG A ++ AR GA + R + L + + V D+S
Sbjct: 8 TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVADVSDP 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ E + F G+L+ + + A +A + ++ E V N F +++ A
Sbjct: 65 KAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAG 123
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+ + GS+V SV G+ G ++ Y A K + L + LA E A+ +R N + P
Sbjct: 124 EVLE--EGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPG 180
Query: 182 VIKTSMIK 189
+I+T M
Sbjct: 181 LIQTPMTA 188
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 5e-41
Identities = 45/191 (23%), Positives = 73/191 (38%), Gaps = 5/191 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSS 60
+VTG ++GIG LA+ GA V +R++ L + G +
Sbjct: 30 KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 89
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E+ + + G L++LI N + NF S L+ A
Sbjct: 90 MTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAA 148
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTV 178
P+ K S GSIV +SS+ G P V+ Y A K A++ ++ E++ N+
Sbjct: 149 LPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 207
Query: 179 APWVIKTSMIK 189
+I T
Sbjct: 208 VLGLIDTETAM 218
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 9e-41
Identities = 59/188 (31%), Positives = 78/188 (41%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
+ LVTGGT+GIG AR GA V +R+ EL + E V G D+S
Sbjct: 43 SVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSD 102
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
TV F G L+++ NA I +T E +S V N + + Q
Sbjct: 103 PGSCADAARTVVDAF-GALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQAC 161
Query: 121 HPLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
ASG G ++ SS+ G V G P S YGA K A + A E A + N +
Sbjct: 162 LAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAIL 221
Query: 180 PWVIKTSM 187
P I T
Sbjct: 222 PGNILTEG 229
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 1e-40
Identities = 50/199 (25%), Positives = 76/199 (38%), Gaps = 13/199 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI-----------ELDARLHEWKNKGF 49
TAL+TGG RG+G + LA GA I +L + + G
Sbjct: 12 TALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR 71
Query: 50 KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
+ + D+ R E + G ++I I NA I+ + ++ + V TN
Sbjct: 72 RCISAKVDVKDRAALESFVAEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTN 130
Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
F+ P G IV +SS+ G + + Y + K + LTK A +
Sbjct: 131 LTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAAHDLV 190
Query: 170 KDNIRTNTVAPWVIKTSMI 188
I N VAP I+T M
Sbjct: 191 GYGITVNAVAPGNIETPMT 209
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-40
Identities = 60/188 (31%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
TA VTGG+RGIG A + LA GA + T A + E + G + D
Sbjct: 33 TAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRD 92
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E E+ I G L+IL+N+A I P + T D V + NF + F + A
Sbjct: 93 AEAIEQAIRETVEAL-GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSA 151
Query: 121 HPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
G I+ I S + + P +SLY A K A+ LTK LA + I N V
Sbjct: 152 SRHLGDGG--RIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVH 209
Query: 180 PWVIKTSM 187
P T M
Sbjct: 210 PGSTDTDM 217
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 1e-40
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 9/186 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG T G+G V++L+R + RN L A V D+
Sbjct: 7 IAVVTGATGGMGIEIVKDLSRDHIVY-ALGRNPEHLAALAEI-----EGVEPIESDIVKE 60
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E ++ + ++ ++ L++ AA+A + + N LS+
Sbjct: 61 VLEEGGVDKLKNL--DHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLL 118
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P +A +G +++I+S G P ++Y A K A+ L E A + IR +TV+P
Sbjct: 119 PALRA-ASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPG 177
Query: 182 VIKTSM 187
T M
Sbjct: 178 PTNTPM 183
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 1e-40
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 5/188 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
AL TG RGIG EL R GA +V + + + E K G + D+S
Sbjct: 23 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK 82
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ L + S F G L+ +++N+ + +++T E V + N F ++Q
Sbjct: 83 PSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 141
Query: 121 HPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
+ G I+ SS+ V GIP+ +LY K A+ + A + + N +A
Sbjct: 142 LKHCRRGG--RIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIA 199
Query: 180 PWVIKTSM 187
P +KT M
Sbjct: 200 PGGVKTDM 207
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 2e-40
Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 16/190 (8%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
M L+TG T G+G A L G + R L E DL+
Sbjct: 1 MRVLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELARE-----VGARALPADLAD 53
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ + L+E G L++L++ A + + + + + + + +
Sbjct: 54 ELEAKALLEEA-----GPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVL--- 105
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ VF + +P + Y A KGA+ + E ++ + V
Sbjct: 106 -KHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRL 164
Query: 181 WVIKTSMIKP 190
+ T + P
Sbjct: 165 PAVATGLWAP 174
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 2e-40
Identities = 38/218 (17%), Positives = 67/218 (30%), Gaps = 52/218 (23%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+++G GIG AT + L G + E+ + DLS+
Sbjct: 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTA 45
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E R++ I V + ++ L+ A + + + V S N+ L
Sbjct: 46 EGRKQAIADVLAKCSKGMDGLVLCAGLG-------PQTKVLGNVVSVNYFGATELMDAFL 98
Query: 122 PLFKASGNGSIVFI----------------------------SSVGGVRGIPSVSLYGAY 153
P K + V I + V Y
Sbjct: 99 PALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGS 158
Query: 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191
K A+ + A W + +R NT+AP +T +++
Sbjct: 159 KNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG 196
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 2e-40
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 5/188 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG RGIG EL R G ++ + + + + K G ++
Sbjct: 31 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 90
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E ++ E IF GKL+I+ +N+ + D+T E+ V + N F +++ A
Sbjct: 91 VEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 149
Query: 121 HPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
+ + G ++ + S G + +P ++Y KGA+ + +A + A I N VA
Sbjct: 150 YKHLEIGG--RLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVA 207
Query: 180 PWVIKTSM 187
P IKT M
Sbjct: 208 PGGIKTDM 215
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 3e-40
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 5/187 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTG +GIG A LA GA V N A G K D+S
Sbjct: 8 TALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDP 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ L + ++ G ++IL+NNA+I D+ + + N F +++
Sbjct: 65 GSVKALFAEIQALT-GGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGT 123
Query: 122 PLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A G ++ I+S G P+++ Y A KG + T+ LA E K NI N V P
Sbjct: 124 DQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTP 183
Query: 181 WVIKTSM 187
+I++
Sbjct: 184 GLIESDG 190
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 1e-39
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG RGIG + LA+ + V SR Q D+ + E K+ G++ +G D+S +
Sbjct: 46 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 105
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
E+ ++I + + ++IL+NNA I T D + ++ V TN S+F++
Sbjct: 106 EEISEVINKILTEH-KNVDILVNNAGI-----TRDNLFLRMKNDEWEDVLRTNLNSLFYI 159
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+Q + G I+ ISS+ G+ G + Y + K + TK+LA E A NI N
Sbjct: 160 TQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVN 219
Query: 177 TVAPWVIKTSM 187
+AP I + M
Sbjct: 220 AIAPGFISSDM 230
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270 | Back alignment and structure |
|---|
Score = 135 bits (341), Expect = 2e-39
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 5/188 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG RGIG A L R GA +V + + + + + E K G D+
Sbjct: 20 VALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQ 79
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ KL + + F G L+I ++N+ + D+T E+ V S N F +++ A
Sbjct: 80 VPEIVKLFDQAVAHF-GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREA 138
Query: 121 HPLFKASGNGSIVFISS-VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
+ G IV SS +P SLY KGA++ + + + I N VA
Sbjct: 139 YRHLTEGG--RIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVA 196
Query: 180 PWVIKTSM 187
P T M
Sbjct: 197 PGGTVTDM 204
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247 | Back alignment and structure |
|---|
Score = 134 bits (339), Expect = 2e-39
Identities = 64/192 (33%), Positives = 99/192 (51%), Gaps = 12/192 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
TA+VTG +RG+G A +L GA IV S LDA E+K G V + D+ +
Sbjct: 7 TAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN 66
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
E E +++T F G+++IL+NNA I T D ++ +D V +TN +S +
Sbjct: 67 PEDVENMVKTAMDAF-GRIDILVNNAGI-----TRDTLMLKMSEKDWDDVLNTNLKSAYL 120
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
++ + +G I+ I+S+ G+ G + Y A K + TK++A E+A I
Sbjct: 121 CTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC 180
Query: 176 NTVAPWVIKTSM 187
N VAP +IKT M
Sbjct: 181 NAVAPGIIKTDM 192
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 2e-39
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 14/208 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
A VTGG G+G A L G + + S + L ++ G D++
Sbjct: 27 VAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD 86
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
E E+ E V + F GK+++LINNA I T D +T D V T+ +++F+
Sbjct: 87 FESCERCAEKVLADF-GKVDVLINNAGI-----TRDATFMKMTKGDWDAVMRTDLDAMFN 140
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+++ G IV I SV G RG + Y + K ++ TK LA E AK I
Sbjct: 141 VTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITV 200
Query: 176 NTVAPWVIKTSMIK--PFEVLSVGIKGR 201
NTV+P + T+M++ P +VL I +
Sbjct: 201 NTVSPGYLATAMVEAVPQDVLEAKILPQ 228
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291 | Back alignment and structure |
|---|
Score = 134 bits (341), Expect = 4e-39
Identities = 57/193 (29%), Positives = 86/193 (44%), Gaps = 13/193 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDAR--LHEWKNKGFKVTGSVC 56
L+TGG GIG A A+ GA I + E DA + +G K
Sbjct: 49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE----EGDANETKQYVEKEGVKCVLLPG 104
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFH 115
DLS + + +++ G LNIL+NN A + + + ITAE + N S FH
Sbjct: 105 DLSDEQHCKDIVQETVRQL-GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFH 163
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+++ A K I+ +S+ G ++ Y A KGA+ T++L+ + IR
Sbjct: 164 VTKAALSHLKQGD--VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRV 221
Query: 176 NTVAPWVIKTSMI 188
N VAP I T +I
Sbjct: 222 NGVAPGPIWTPLI 234
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 6e-39
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 16/188 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LV +RGIG A + L++ GA V C+RN+ L H + VCDL
Sbjct: 21 GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYV---------VCDLR-- 69
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
K ++ + +++IL+ NA ++T ED + F ++ + +
Sbjct: 70 ----KDLDLLFEKV-KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P K G G IV I+S + I ++ + + A+ K L+ E A I N VAP
Sbjct: 125 PAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG 184
Query: 182 VIKTSMIK 189
+T +K
Sbjct: 185 WTETERVK 192
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 6e-39
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 12/192 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
A VTGG GIG + + L + G +V C N L + K GF S ++
Sbjct: 15 IAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGD 74
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
+ ++ + V + G++++L+NNA I T D +T ED V TN S+F+
Sbjct: 75 WDSTKQAFDKVKAEV-GEIDVLVNNAGI-----TRDVVFRKMTREDWQAVIDTNLTSLFN 128
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+++ G G I+ ISSV G +G + Y K ++ T +LA E A +
Sbjct: 129 VTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTV 188
Query: 176 NTVAPWVIKTSM 187
NTV+P I T M
Sbjct: 189 NTVSPGYIGTDM 200
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 1e-38
Identities = 64/192 (33%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG LA GA V + +Q + + K KGFK G V ++S
Sbjct: 7 VALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDI 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
E + + + ++IL+NNA I T D ++ ++ +V +TN S+F +
Sbjct: 67 ESIQNFFAEIKAEN-LAIDILVNNAGI-----TRDNLMMRMSEDEWQSVINTNLSSIFRM 120
Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
S+ + K G I+ I SV G G P + Y A K + +K+LA E A NI
Sbjct: 121 SKECVRGMMKKR-WGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITV 179
Query: 176 NTVAPWVIKTSM 187
N VAP I T M
Sbjct: 180 NVVAPGFIATDM 191
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 1e-38
Identities = 64/191 (33%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTG +RGIG A ELAR GA+V + + + +K G + G+V +++
Sbjct: 30 VAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDA 89
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
+ L+E+ F G LN+L+NNA I T D + ++ V TN ++VF L
Sbjct: 90 TAVDALVESTLKEF-GALNVLVNNAGI-----TQDQLAMRMKDDEWDAVIDTNLKAVFRL 143
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
S+ + G IV I+SV G G P Y A K + +T+ LA E I N
Sbjct: 144 SRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVN 203
Query: 177 TVAPWVIKTSM 187
VAP I T M
Sbjct: 204 CVAPGFIDTDM 214
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 1e-38
Identities = 45/210 (21%), Positives = 72/210 (34%), Gaps = 38/210 (18%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+TG GIG A E LAR G V R Q +++A DLS+
Sbjct: 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------------DLSTP 45
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKP---------------TVDITAEDMS--- 103
RE + V G L+ L+ A + +D AE +S
Sbjct: 46 GGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ 105
Query: 104 --TVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLT 161
+ P+ +A G + +G ++ Y K A+ L
Sbjct: 106 QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLA-YAGSKYAVTCLA 164
Query: 162 KNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191
+ +WA +R N VAP ++T +++
Sbjct: 165 RRNVVDWAGRGVRLNVVAPGAVETPLLQAS 194
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-38
Identities = 54/214 (25%), Positives = 84/214 (39%), Gaps = 23/214 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLS 59
A+VTG + IG A +L + G +V + + E K + DL+
Sbjct: 25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLT 84
Query: 60 SREQR----EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST----------V 105
+ E++I + F G+ ++L+NNA+ + P V ED S +
Sbjct: 85 NSNVLPASCEEIINSCFRAF-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAEL 143
Query: 106 SSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
TN + F L+ K + N SIV + + + SLY K A+
Sbjct: 144 IGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVG 203
Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193
LT++ A E A IR N VAP V + E
Sbjct: 204 LTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEE 237
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259 | Back alignment and structure |
|---|
Score = 132 bits (334), Expect = 2e-38
Identities = 52/190 (27%), Positives = 76/190 (40%), Gaps = 7/190 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
T +V G R IG A A+ GA +V T + + E + G DL++
Sbjct: 10 TIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTN 69
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ E I F G+++ L++ A K ++ V N S+F ++
Sbjct: 70 AAEVEAAISAAADKF-GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKT 128
Query: 120 AHPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A P G+IV SS G G P Y KGA+ T+ LA E IR N V
Sbjct: 129 ALPKMAKG--GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KIRVNAV 185
Query: 179 APWVIKTSMI 188
P +I T+
Sbjct: 186 CPGMISTTFH 195
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 2e-38
Identities = 59/195 (30%), Positives = 84/195 (43%), Gaps = 12/195 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDAR--LHEWKNKGFKVTGSVC 56
ALVTGG GIG A AR GA I + + E DA+ + G K
Sbjct: 51 KALVTGGDSGIGRAAAIAYAREGADVAINYLPAE---EEDAQQVKALIEECGRKAVLLPG 107
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFH 115
DLS L+ G L+IL A P + D+T+E + N ++F
Sbjct: 108 DLSDESFARSLVHKAREAL-GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFW 166
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
++Q A PL SI+ SS+ + P + Y A K A+ ++ LA + A+ IR
Sbjct: 167 ITQEAIPLLPKGA--SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRV 224
Query: 176 NTVAPWVIKTSMIKP 190
N VAP I T++
Sbjct: 225 NIVAPGPIWTALQIS 239
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 3e-38
Identities = 48/196 (24%), Positives = 81/196 (41%), Gaps = 9/196 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVCDLS 59
TA VTGG G+G V +L G V Q +D E + G +V G D++
Sbjct: 10 TAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVA 69
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
SRE + + V + F G ++IL NNA + +P + + +D + N V +
Sbjct: 70 SREGFKMAADEVEARF-GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTT 128
Query: 120 AHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
P G +V +S+ S +Y K A+ L+++L K I
Sbjct: 129 FVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEI 188
Query: 174 RTNTVAPWVIKTSMIK 189
+ + P ++K+ +
Sbjct: 189 GVSVLCPGLVKSYIYA 204
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 3e-38
Identities = 63/192 (32%), Positives = 87/192 (45%), Gaps = 12/192 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG +RGIG A ELA GA + + + D + G + D+S
Sbjct: 30 IALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ 89
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
+ E L V + G+L++L+NNA I T D + +D +V N VF
Sbjct: 90 ESEVEALFAAVIERW-GRLDVLVNNAGI-----TRDTLLLRMKRDDWQSVLDLNLGGVFL 143
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
S+ A + +G I+ I+SV G G P + Y A K + LTK +A E A I
Sbjct: 144 CSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITV 203
Query: 176 NTVAPWVIKTSM 187
N VAP I T M
Sbjct: 204 NAVAPGFIATDM 215
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 4e-38
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 22/204 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV------------HTCSRNQIELDARLHEWKNKGF 49
A +TG RG G A LA GA + EL A + ++ G
Sbjct: 15 VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS 74
Query: 50 KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
++ D+ RE ++ G+L+I++ NA IA + + V N
Sbjct: 75 RIVARQADVRDRESLSAALQAGLDEL-GRLDIVVANAGIA----PMSAGDDGWHDVIDVN 129
Query: 110 FESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGI----PSVSLYGAYKGAMNQLTKNL 164
V+H ++A P G GSIV ISS G+ G+ P Y A K + L +
Sbjct: 130 LTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVY 189
Query: 165 ACEWAKDNIRTNTVAPWVIKTSMI 188
A A IR N++ P ++T MI
Sbjct: 190 ANLLAGQMIRVNSIHPSGVETPMI 213
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 4e-38
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 12/192 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
+VTG +RGIG A L + G ++ +R+ + + + G + D+S
Sbjct: 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
E +++T + G +++++NNA I T D + V N VF
Sbjct: 63 EADVEAMMKTAIDAW-GTIDVVVNNAGI-----TRDTLLIRMKKSQWDEVIDLNLTGVFL 116
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+Q A + G I+ I+SV G+ G + Y A K + +K A E A NI
Sbjct: 117 CTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINV 176
Query: 176 NTVAPWVIKTSM 187
N V P I + M
Sbjct: 177 NVVCPGFIASDM 188
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 4e-38
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 12/192 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG +RGIG A +LA+ GA +V + N+ + + + E K G D+++
Sbjct: 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN 65
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
E +++ +F G+++IL+NNA + T D + E+ TV +TN + VF
Sbjct: 66 AEDVTNMVKQTVDVF-GQVDILVNNAGV-----TKDNLLMRMKEEEWDTVINTNLKGVFL 119
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
++ +G IV I+SV GV G P + Y A K + LTK A E A NI
Sbjct: 120 CTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITV 179
Query: 176 NTVAPWVIKTSM 187
N +AP I T M
Sbjct: 180 NAIAPGFIATDM 191
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264 | Back alignment and structure |
|---|
Score = 131 bits (331), Expect = 5e-38
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 6/191 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
AL+T GT+G+G E+L G + T + ++ +K+ ++ D++
Sbjct: 9 HALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK 68
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHLSQ 118
+E K++E S F GK++ LINNA + VD ++ + + N +VFHL +
Sbjct: 69 KEDLHKIVEEAMSHF-GKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLK 127
Query: 119 LAHPLFKASGNGSIVFIS--SVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
L P+ + G I+ G S + A K + LTK +A E A+ I N
Sbjct: 128 LVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITAN 187
Query: 177 TVAPWVIKTSM 187
V P I M
Sbjct: 188 MVCPGDIIGEM 198
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246 | Back alignment and structure |
|---|
Score = 129 bits (328), Expect = 1e-37
Identities = 62/192 (32%), Positives = 97/192 (50%), Gaps = 12/192 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
+ALVTG +RGIG + +LA G + + ++ + +A + E K KG +++
Sbjct: 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVAD 65
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
++ + +I+ V S F G L++L+NNA I T D + ++ V TN + VF+
Sbjct: 66 ADEVKAMIKEVVSQF-GSLDVLVNNAGI-----TRDNLLMRMKEQEWDDVIDTNLKGVFN 119
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
Q A P +G+I+ +SSV G G P + Y A K + LTK+ A E A I
Sbjct: 120 CIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITV 179
Query: 176 NTVAPWVIKTSM 187
N VAP I + M
Sbjct: 180 NAVAPGFIVSDM 191
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 1e-37
Identities = 47/210 (22%), Positives = 78/210 (37%), Gaps = 28/210 (13%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV------------HTCSRNQIELDARLHEWKNKGF 49
LVTGG RG G + +LA GA + +L+ E + G
Sbjct: 12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR 71
Query: 50 KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109
K + D+ R + + + F GKL++++ NA I + + + +
Sbjct: 72 KAYTAEVDVRDRAAVSRELANAVAEF-GKLDVVVANAGIC--PLGAHLPVQAFADAFDVD 128
Query: 110 FESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSLYGAYKGAMN 158
F V + A P + SI+ SV G+ P + Y K ++
Sbjct: 129 FVGVINTVHAALPYLTSGA--SIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVD 186
Query: 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188
T LA + A +IR N + P + T M+
Sbjct: 187 SYTLQLAAQLAPQSIRANVIHPTNVNTDML 216
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 3e-37
Identities = 57/199 (28%), Positives = 82/199 (41%), Gaps = 18/199 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVT-------GS 54
ALVTG GIG A LA GA V C ++ + G K
Sbjct: 9 LALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAF 68
Query: 55 VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTN 109
D+S L+E V + F +++++ A I T D ++ +D V + N
Sbjct: 69 QADVSEARAARCLLEQVQACFSRPPSVVVSCAGI-----TQDEFLLHMSEDDWDKVIAVN 123
Query: 110 FESVFHLSQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
+ F ++Q A L GSI+ ISS+ G G + Y A K + LT+ A E
Sbjct: 124 LKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAAREL 183
Query: 169 AKDNIRTNTVAPWVIKTSM 187
+ IR N+V P I T M
Sbjct: 184 GRHGIRCNSVLPGFIATPM 202
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 8e-37
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 7/192 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
LVTGG+RGIG A AR G + + N+ DA + G + D+ +
Sbjct: 28 VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87
Query: 61 REQREKLIETVTSIFQGKLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ V F G+L+ L+NNA I + + +++ E + + N +
Sbjct: 88 AADIAAMFSAVDRQF-GRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAE 146
Query: 120 AHPLF---KASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
A + G+IV +SS+ + G Y A K A++ T LA E A + IR
Sbjct: 147 AVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRV 206
Query: 176 NTVAPWVIKTSM 187
N V P +I+T +
Sbjct: 207 NAVRPGIIETDL 218
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 9e-37
Identities = 66/193 (34%), Positives = 87/193 (45%), Gaps = 14/193 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
+LVTG TRGIG A E+LA G+ V + A E NK G K G +L S
Sbjct: 9 VSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS 68
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFH 115
E K E + ++ ++IL+NNA I T D ++ D V N F
Sbjct: 69 EESINKAFEEIYNLV-DGIDILVNNAGI-----TRDKLFLRMSLLDWEEVLKVNLTGTFL 122
Query: 116 LSQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
++Q + + K G IV ISSV G G Y K + TK+LA E A N+
Sbjct: 123 VTQNSLRKMIKQRW-GRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVL 181
Query: 175 TNTVAPWVIKTSM 187
N VAP I+T M
Sbjct: 182 VNAVAPGFIETDM 194
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 2e-36
Identities = 63/192 (32%), Positives = 92/192 (47%), Gaps = 16/192 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG A E LA GA V + ++ A G G ++++
Sbjct: 11 VALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL---GDNGKGMALNVTNP 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
E E +++ +T F G ++IL+NNA I T D + E+ S + TN S+F L
Sbjct: 68 ESIEAVLKAITDEF-GGVDILVNNAGI-----TRDNLLMRMKEEEWSDIMETNLTSIFRL 121
Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
S+ + K G I+ + SV G G + Y A K + TK++A E A +
Sbjct: 122 SKAVLRGMMKKRQ-GRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 180
Query: 176 NTVAPWVIKTSM 187
NTVAP I+T M
Sbjct: 181 NTVAPGFIETDM 192
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 3e-36
Identities = 47/214 (21%), Positives = 78/214 (36%), Gaps = 23/214 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLS 59
A++TGG R IGH+ L + G +V ++ + E + DLS
Sbjct: 13 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 72
Query: 60 SREQ----REKLIETVTSIFQGKLNILINNAAIAFVKP-----------TVDITAEDMST 104
E +I+ F G+ ++L+NNA+ + P ++
Sbjct: 73 LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 131
Query: 105 VSSTNFESVFHLSQLAHPLFKASG-----NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
+ +N + L + G N S+V + +P +Y K A+
Sbjct: 132 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 191
Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193
LT+ A E A +IR N VAP + P E
Sbjct: 192 LTRAAALELAPRHIRVNAVAPGLSLLPPAMPQET 225
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266 | Back alignment and structure |
|---|
Score = 125 bits (317), Expect = 6e-36
Identities = 59/192 (30%), Positives = 86/192 (44%), Gaps = 16/192 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG T GIG A GAIV + +L + G V +LS R
Sbjct: 29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKE---IAADLGKDVFVFSANLSDR 85
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
+ ++L E ++IL+NNA I T D + +D V + N + L
Sbjct: 86 KSIKQLAEVAEREM-EGIDILVNNAGI-----TRDGLFVRMQDQDWDDVLAVNLTAASTL 139
Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
++ H + + G I+ I+S+ GV G P + Y A K + +K LA E A NI
Sbjct: 140 TRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITV 198
Query: 176 NTVAPWVIKTSM 187
N +AP IK++M
Sbjct: 199 NCIAPGFIKSAM 210
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 9e-36
Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 17/191 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG GIG AT+E A+ GA + C + L + V D++
Sbjct: 7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAA-----EAVGAHPVVMDVADP 61
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
E+ + G+L+ +++ A I T D + ED V N F +
Sbjct: 62 ASVERGFAEALAHL-GRLDGVVHYAGI-----TRDNFHWKMPLEDWELVLRVNLTGSFLV 115
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
++ A + GSIV +S + G + Y A + LT+ LA E + IR N
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRTLALELGRWGIRVN 174
Query: 177 TVAPWVIKTSM 187
T+AP I+T M
Sbjct: 175 TLAPGFIETRM 185
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 1e-35
Identities = 34/185 (18%), Positives = 72/185 (38%), Gaps = 10/185 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
++TG + G+G + G + R++ ++L N V DL+S
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSE----SKLSTVTNCLSNNVGYRARDLAS 58
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
++ E+L E + + ++++A + + E + T+ N S ++ +
Sbjct: 59 HQEVEQLFEQL----DSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+K ++V I S + S Y A K A+ L +++ E ++ V P
Sbjct: 115 VKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP 173
Query: 181 WVIKT 185
+ T
Sbjct: 174 GGMAT 178
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-35
Identities = 61/194 (31%), Positives = 89/194 (45%), Gaps = 15/194 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFK-VTGSVCDLS 59
AL+TG +RGIG A LA G + +N+ + + E + +G V +L
Sbjct: 3 KALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLL 62
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVF 114
E L+ + G L+ L+NNA I T D + ED V N +VF
Sbjct: 63 EAEAATALVHQAAEVL-GGLDTLVNNAGI-----TRDTLLVRMKDEDWEAVLEANLSAVF 116
Query: 115 HLSQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
++ A + KA G IV I+SV G+ G P + Y A K + T+ +A E+A+ I
Sbjct: 117 RTTREAVKLMMKARF-GRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGI 175
Query: 174 RTNTVAPWVIKTSM 187
N VAP I+T M
Sbjct: 176 TVNAVAPGFIETEM 189
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267 | Back alignment and structure |
|---|
Score = 124 bits (314), Expect = 2e-35
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 22/215 (10%)
Query: 2 TALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
+ L+TG RG+G V+ L + T RN+ + L + + DL
Sbjct: 23 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 81
Query: 59 SSREQREKLIETVTSIFQG-KLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHL 116
+ + +KL+ + + + LN+L NNA IA + + ++++ TN L
Sbjct: 82 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 141
Query: 117 SQLAHPLFKAS-----------GNGSIVFISSVGG---VRGIPSVSLYGAYKGAMNQLTK 162
++ PL K + G +I+ +SS+ G + Y K A+N TK
Sbjct: 142 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 201
Query: 163 NLACEWAKDNIRTNTVAP-WVIKTSMIKPFEVLSV 196
+L+ + I ++ P WV KT M L V
Sbjct: 202 SLSVDLYPQRIMCVSLHPGWV-KTDMGGSSAPLDV 235
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 4e-35
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 5/185 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-WKNKGFKVTGSVCDLSS 60
A++TG +RGIG A LAR G + +R+ L+ HE + +G +V D+S
Sbjct: 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK 63
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E E+ + V F G +++++ NA + + K +++ E+ + N V+ +
Sbjct: 64 AESVEEFSKKVLERF-GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAF 122
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
K +G ++V S V R IP Y + K A L + E ++R + P
Sbjct: 123 LDSLKRTGGLALVTTSDVSA-RLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFELRP 179
Query: 181 WVIKT 185
+ T
Sbjct: 180 GAVDT 184
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 6e-35
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 7/182 (3%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
M LVTG T G G + G V R Q RL E K++ G + + D+
Sbjct: 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ----ERLQELKDELGDNLYIAQLDVR 56
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
+R E+++ ++ + + ++IL+NNA +A ++P + ED T+ TN + + ++++
Sbjct: 57 NRAAIEEMLASLPAEW-CNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTR 115
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
P +G I+ I S G ++YGA K + Q + NL + +R +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175
Query: 179 AP 180
P
Sbjct: 176 EP 177
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249 | Back alignment and structure |
|---|
Score = 121 bits (305), Expect = 2e-34
Identities = 58/192 (30%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T+L+TG + GIG A L + G+ V N+ +L + + K+ VC+L+++
Sbjct: 16 TSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIE---VCNLANK 72
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
E+ LI L+IL+ NA I T D + +D V N ++ F L
Sbjct: 73 EECSNLISKT-----SNLDILVCNAGI-----TSDTLAIRMKDQDFDKVIDINLKANFIL 122
Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
++ A + + G I+ ISS+ G+ G P + Y A K + +TK+L+ E A I
Sbjct: 123 NREAIKKMIQKR-YGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITV 181
Query: 176 NTVAPWVIKTSM 187
N VAP IK+ M
Sbjct: 182 NAVAPGFIKSDM 193
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 4e-34
Identities = 40/200 (20%), Positives = 74/200 (37%), Gaps = 15/200 (7%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
+A+V+GG G+G ATV L G V + A E G + +++S
Sbjct: 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE---LGNRAEFVSTNVTS 87
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST-----VSSTNFESVFH 115
+ IE + ++ + + V ++
Sbjct: 88 EDSVLAAIEAANQLG-RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYN 146
Query: 116 LSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
+++L A+ G++V +S+ G G + Y A K + LT A + +
Sbjct: 147 VARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDLS 206
Query: 170 KDNIRTNTVAPWVIKTSMIK 189
IR NT+AP +KT +++
Sbjct: 207 SAGIRVNTIAPGTMKTPIME 226
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253 | Back alignment and structure |
|---|
Score = 120 bits (304), Expect = 4e-34
Identities = 56/192 (29%), Positives = 82/192 (42%), Gaps = 24/192 (12%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ LVTGG RGIG A A G V R+ + CD++
Sbjct: 23 SVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDT 71
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
EQ E+ + + G + +LI NA + T D ++ ED ++V TN F +
Sbjct: 72 EQVEQAYKEIEETH-GPVEVLIANAGV-----TKDQLLMRMSEEDFTSVVETNLTGTFRV 125
Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+ A + +A G +V ISSV G+ G + Y A K + ++LA E NI
Sbjct: 126 VKRANRAMLRAKK-GRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITF 184
Query: 176 NTVAPWVIKTSM 187
N VAP + T M
Sbjct: 185 NVVAPGFVDTDM 196
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247 | Back alignment and structure |
|---|
Score = 119 bits (302), Expect = 6e-34
Identities = 52/192 (27%), Positives = 84/192 (43%), Gaps = 24/192 (12%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ LVTGG RGIG A + LA G V R + G D++
Sbjct: 17 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----------GLFGVEVDVTDS 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVFHL 116
+ ++ V G + +L++NA + + D +T E V + N F +
Sbjct: 66 DAVDRAFTAVEEHQ-GPVEVLVSNAGL-----SADAFLMRMTEEKFEKVINANLTGAFRV 119
Query: 117 SQLA-HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+Q A + + G ++FI SV G+ GI + + Y A K + + +++A E +K N+
Sbjct: 120 AQRASRSMQRNKF-GRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTA 178
Query: 176 NTVAPWVIKTSM 187
N VAP I T M
Sbjct: 179 NVVAPGYIDTDM 190
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 1e-33
Identities = 43/231 (18%), Positives = 81/231 (35%), Gaps = 40/231 (17%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
ALVTG + +G + E L G + R+ E +A + DLS
Sbjct: 11 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 70
Query: 60 S-----------------REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAED- 101
+ + +L+ + + G+ ++L+NNA+ + P + +
Sbjct: 71 NVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGH 129
Query: 102 -------------MSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVR 142
+ + +N + + L + + N SI+ + +
Sbjct: 130 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 189
Query: 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193
+ ++Y KGA+ LT++ A E A IR N V P + P V
Sbjct: 190 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAV 240
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 2e-33
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 2/184 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
AL+TG + GIG AT LA GA V +R +L A E G KV D++ R
Sbjct: 9 VALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADR 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + + + G L+IL+NNA I + P D D + + TN + ++++ A
Sbjct: 69 QGVDAAVASTVEAL-GGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAAL 127
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P G++V +SS+ G + + ++Y A K +N ++ L E + +R + P
Sbjct: 128 PHLLR-SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPG 186
Query: 182 VIKT 185
T
Sbjct: 187 TTDT 190
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 3e-33
Identities = 53/194 (27%), Positives = 80/194 (41%), Gaps = 19/194 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
A+VTG RGIG E AR GA + +L + D++
Sbjct: 215 VAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTAL-----TLDVT 269
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD-----ITAEDMSTVSSTNFESVF 114
+ + +K+ VT GK++IL+NNA I T D + + V + N +
Sbjct: 270 ADDAVDKITAHVTEHHGGKVDILVNNAGI-----TRDKLLANMDEKRWDAVIAVNLLAPQ 324
Query: 115 HLSQ-LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
L++ L G G ++ +SS+ G+ G + Y K M L + LA A I
Sbjct: 325 RLTEGLVGNGTIGEG-GRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGI 383
Query: 174 RTNTVAPWVIKTSM 187
N VAP I+T M
Sbjct: 384 TINAVAPGFIETKM 397
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 3e-33
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 7/184 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
++TG + GIG A + G + +R RL + D++ +
Sbjct: 18 LVVITGASSGIGEAIARRFSEEGHPLLLLARRV----ERLKALNLP--NTLCAQVDVTDK 71
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ I I+ G + ++NNA + + A + + N + + Q
Sbjct: 72 YTFDTAITRAEKIY-GPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVL 130
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
KA G+I+ ISS+ G + P + Y K A++ +++N+ E A N+R T+AP
Sbjct: 131 APMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPS 190
Query: 182 VIKT 185
+KT
Sbjct: 191 AVKT 194
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 4e-33
Identities = 43/231 (18%), Positives = 80/231 (34%), Gaps = 40/231 (17%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLS 59
ALVTG + +G + E L G + R+ E +A + DLS
Sbjct: 48 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 107
Query: 60 -----------------SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAED- 101
+ +L+ + + G+ ++L+NNA+ + P + +
Sbjct: 108 NVATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGH 166
Query: 102 -------------MSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVR 142
+ + +N + + L + + N SI+ + +
Sbjct: 167 EPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQ 226
Query: 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193
+ ++Y KGA+ LT++ A E A IR N V P + P V
Sbjct: 227 PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAV 277
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 8e-33
Identities = 50/218 (22%), Positives = 84/218 (38%), Gaps = 27/218 (12%)
Query: 2 TALVTGGTRGIGHATVEELARFGAI--VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
+ +VTG RGIG V++L + I + +R+ + L K+ V ++
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKSIKDSRVHVL--PLTVT 61
Query: 60 SREQREKLIETVTSIFQG-KLNILINNAAIAFVKPTV-DITAEDMSTVSSTNFESVFHLS 117
+ + + V I L++LINNA + T + ++ N SV L+
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 118 QLAHPLFKAS-----------GNGSIVFISSVGG-------VRGIPSVSLYGAYKGAMNQ 159
Q PL K + +++ ISS G V Y K A+N
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 160 LTKNLACEWAKDNIRTNTVAP-WVIKTSMIKPFEVLSV 196
+ LA + DN+ P WV +T++ L+V
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWV-QTNLGGKNAALTV 218
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 1e-32
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG + GIG EL GA + +R Q ++A E ++ G V D++ R
Sbjct: 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDR 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + G++++L+NNA + + P + ++ + N + V
Sbjct: 66 HSVAAFAQAAVDTW-GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVL 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P+ +A +G I+ I S+G + +P+ ++Y A K A+ ++ L E NIR V P
Sbjct: 125 PIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPG 182
Query: 182 VIKT 185
V+++
Sbjct: 183 VVES 186
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 1e-32
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 4/186 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T +TG T G G A A G + R + L A L + +V D+ R
Sbjct: 23 TLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA-LAGELSAKTRVLPLTLDVRDR 81
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
++ + F L LINNA +A P +D T+ TN + + + ++L
Sbjct: 82 AAMSAAVDNLPEEF-ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLL 140
Query: 121 HPLFKASGNGS-IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
P A G G+ IV + SV G P +YG K + Q + NL C+ +R +
Sbjct: 141 LPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLE 200
Query: 180 PWVIKT 185
P + ++
Sbjct: 201 PGLCES 206
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-31
Identities = 48/199 (24%), Positives = 82/199 (41%), Gaps = 16/199 (8%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
+ A++TGG G+G AT E L GA +A+ + G + D++S
Sbjct: 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAPADVTS 69
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDI------TAEDMSTVSSTNFESVF 114
+ + + F G++++ +N A IA T ++ T ED V N F
Sbjct: 70 EKDVQTALALAKGKF-GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 128
Query: 115 HLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
++ +L + G I+ +SV G + Y A KG + +T +A +
Sbjct: 129 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL 188
Query: 169 AKDNIRTNTVAPWVIKTSM 187
A IR T+AP + T +
Sbjct: 189 APIGIRVMTIAPGLFGTPL 207
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-31
Identities = 55/191 (28%), Positives = 89/191 (46%), Gaps = 9/191 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHT---CSRNQ---IELDARLHEWKNKGFKVTGSV 55
T L+TG + GIG AT E +R EL + + + KV +
Sbjct: 35 TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQ-EFPNAKVHVAQ 93
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVF 114
D++ E+ + IE + F ++IL+NNA A I ED+ V TN ++
Sbjct: 94 LDITQAEKIKPFIENLPQEF-KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALI 152
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
+++Q P+F+A +G IV + S+ G P+ S+Y A K A+ T +L E IR
Sbjct: 153 NITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIR 212
Query: 175 TNTVAPWVIKT 185
+AP +++T
Sbjct: 213 VILIAPGLVET 223
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257 | Back alignment and structure |
|---|
Score = 112 bits (283), Expect = 5e-31
Identities = 46/198 (23%), Positives = 75/198 (37%), Gaps = 14/198 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTG + G+G A LA+ GA V + E G V D+++
Sbjct: 9 VFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE---LGAAVRFRNADVTNE 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD----ITAEDMSTVSSTNFESVFHLS 117
+ F G ++ L+N A A + + + + + N F++
Sbjct: 66 ADATAALAFAKQEF-GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMI 124
Query: 118 QLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
+LA + G IV +S+ G + Y A KG + LT A E A+
Sbjct: 125 RLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAARELARF 184
Query: 172 NIRTNTVAPWVIKTSMIK 189
IR T+AP + T M+
Sbjct: 185 GIRVVTIAPGIFDTPMMA 202
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279 | Back alignment and structure |
|---|
Score = 112 bits (282), Expect = 1e-30
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLS 59
ALVTG + GIG A L + G V C+R ++ E K+ G+ + CDLS
Sbjct: 34 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 93
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ E + + S ++I INNA +A + + + + N ++ ++
Sbjct: 94 NEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 152
Query: 120 AHPLFKASG--NGSIVFISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEW--AKDNI 173
A+ K +G I+ I+S+ G R +P Y A K A+ LT+ L E A+ +I
Sbjct: 153 AYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHI 212
Query: 174 RTNTVAPWVIKT 185
R ++P V++T
Sbjct: 213 RATCISPGVVET 224
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 4e-30
Identities = 45/198 (22%), Positives = 78/198 (39%), Gaps = 20/198 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+VTGG G+G AT + L GA V ++ A L G + + D++
Sbjct: 11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL------GDRARFAAADVTDE 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD----ITAEDMSTVSSTNFESVFHLS 117
++ ++ G L I++N A + + + N F++
Sbjct: 65 AAVASALDLAETM--GTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVL 122
Query: 118 QLA-------HPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA 169
+LA P+ + G I+ +SV G + Y A KG + +T +A + A
Sbjct: 123 RLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARDLA 182
Query: 170 KDNIRTNTVAPWVIKTSM 187
IR T+AP + T +
Sbjct: 183 SHRIRVMTIAPGLFDTPL 200
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 4e-30
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 4/185 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTG + G G A E G V +R LD L + D++
Sbjct: 7 VWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD-LVAAYPDRAEAI--SLDVTDG 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E+ + + V + + G++++L+NNA V + T ++ + + L++
Sbjct: 64 ERIDVVAADVLARY-GRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALL 122
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + G+GS+V ISS GG S Y A K A+ QL++ LA E A I+ V P
Sbjct: 123 PQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPG 182
Query: 182 VIKTS 186
+T+
Sbjct: 183 AFRTN 187
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 3e-29
Identities = 42/191 (21%), Positives = 77/191 (40%), Gaps = 9/191 (4%)
Query: 2 TALVTGGTRGIGHATVEELARF---GAIVHTCSRN---QIELDARLHEWKNKGFKVTGSV 55
L+TG + GIG LA V+ R+ Q L +
Sbjct: 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQ 63
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
D+ + E VT +G++++L+ NA + + P + + +++V N
Sbjct: 64 LDVRDSKSVAAARERVT---EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVR 120
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+ Q P K G+G ++ SVGG+ G+P +Y A K A+ L ++LA +
Sbjct: 121 MLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHL 180
Query: 176 NTVAPWVIKTS 186
+ + + T+
Sbjct: 181 SLIECGPVHTA 191
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 112 bits (281), Expect = 4e-29
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 14/195 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
++TG G+G E A+ GA V + N D + E G
Sbjct: 10 VVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-- 67
Query: 53 GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
+V D ++ +K++ET F G ++++INNA I +T +D V +
Sbjct: 68 -AVADYNNVLDGDKIVETAVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNG 125
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
F +++ A P F+ G IV SS G+ G + Y + K A+ + LA E AK N
Sbjct: 126 AFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEGAKYN 185
Query: 173 IRTNTVAPWVIKTSM 187
I+ N +AP + ++ M
Sbjct: 186 IKANAIAP-LARSRM 199
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 2e-25
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 8/190 (4%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLS 59
L+TG G+G + A++GA V N + + E K G + D++
Sbjct: 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVV---NDFKDATKTVDEIKAAGGEAWPDQHDVA 379
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ E +I+ V + G ++IL+NNA I + ++ ++ +V + F+LS+L
Sbjct: 380 --KDSEAIIKNVIDKY-GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRL 436
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P F G I+ I+S G+ G + Y + K + L+K +A E AK+NI+ N VA
Sbjct: 437 AWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVA 496
Query: 180 PWVIKTSMIK 189
P +T+M
Sbjct: 497 P-HAETAMTL 505
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 7e-29
Identities = 46/196 (23%), Positives = 70/196 (35%), Gaps = 24/196 (12%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ALVTGG G+G A L G V + D E D++
Sbjct: 4 SALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIYVE------------GDVTRE 51
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVD----ITAEDMSTVSSTNFESVFHLS 117
E + + + L +++ A + + + E V N F++
Sbjct: 52 EDVRRAVARAQE--EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109
Query: 118 QLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD 171
+LA + + G IV +SV G + Y A KG + LT A E A
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 169
Query: 172 NIRTNTVAPWVIKTSM 187
IR TVAP + T +
Sbjct: 170 GIRVVTVAPGLFDTPL 185
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 9e-29
Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
LVTG G+G A A GA+V + D + E + +G K
Sbjct: 11 VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK-- 68
Query: 53 GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
+V + S E EKL++T F G++++++NNA I + I+ ED + +
Sbjct: 69 -AVANYDSVEAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 126
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
F +++ A K G I+ +S G+ G + Y A K + L L E K+N
Sbjct: 127 SFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNN 186
Query: 173 IRTNTVAPWVIKTSM 187
I NT+AP + M
Sbjct: 187 IHCNTIAP-NAGSRM 200
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 1e-28
Identities = 55/241 (22%), Positives = 84/241 (34%), Gaps = 49/241 (20%)
Query: 2 TALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
ALVTGG +GIG A V +L F V +R+ A + + + +G D+
Sbjct: 6 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDD 65
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ L + + + G L++L+NNA IAF TNF +
Sbjct: 66 LQSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTEL 124
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSL------------------------------- 149
PL K G +V +SS+ VR + S S
Sbjct: 125 LPLIKPQ--GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 182
Query: 150 ----------YGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSMIKPFEVLS 195
YG K + L++ A + ++ D I N P ++T M P S
Sbjct: 183 HQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKS 242
Query: 196 V 196
Sbjct: 243 P 243
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 1e-28
Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 7/192 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-----WKNKGFKVTGSVC 56
L+TG + G G T E LA G V+ R+ + +A E ++ +
Sbjct: 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLEL 66
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
D+ S+ ++ I+ + G++++LI+NA P T E + + N S +
Sbjct: 67 DVQSQVSVDRAIDQIIGED-GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRV 125
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
++ A P + +G +++ISS G P ++ Y A K AM+ + A E ++ I T
Sbjct: 126 NRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIET 185
Query: 176 NTVAPWVIKTSM 187
+ + P +
Sbjct: 186 SIIVPGAFTSGT 197
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 2e-28
Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 18/202 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV----------HTCSRNQIELDARLHEWKNKGFKV 51
+VTG GIG A A GA V + + + + E G +
Sbjct: 29 VVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEA 88
Query: 52 TGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE 111
+++ +Q LI+T F G L++L+NNA I + + + E+ V + + +
Sbjct: 89 VADGSNVADWDQAAGLIQTAVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLK 147
Query: 112 SVFHLSQLAHPLFKASGN------GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
F + A ++ G I+ SS G++G Y A K + LT A
Sbjct: 148 GHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLTLVGA 207
Query: 166 CEWAKDNIRTNTVAPWVIKTSM 187
E + + N +AP +T M
Sbjct: 208 AEMGRYGVTVNAIAP-SARTRM 228
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 4e-26
Identities = 53/188 (28%), Positives = 82/188 (43%), Gaps = 13/188 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
A+VTG G+G A GA V +Q D + E + G +
Sbjct: 21 VAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE-- 78
Query: 53 GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
+V D +S K+IET F G+++IL+NNA I + V + +D + V+ + +
Sbjct: 79 -AVADYNSVIDGAKVIETAIKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKG 136
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
F +Q A P K G I+ SS G+ G Y A K + L +A E A++N
Sbjct: 137 SFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGARNN 196
Query: 173 IRTNTVAP 180
+ N + P
Sbjct: 197 VLCNVIVP 204
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311 | Back alignment and structure |
|---|
Score = 95.4 bits (237), Expect = 6e-24
Identities = 53/270 (19%), Positives = 87/270 (32%), Gaps = 78/270 (28%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSS 60
A+VTGG +GIG ++L+ G +V R+ + + + KN V D++
Sbjct: 14 CAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD 73
Query: 61 REQ-REKLIETVTSIFQGKLNILINNAAIAFVKPTVD----------------------- 96
L + + + F GKL+IL+NNA +A D
Sbjct: 74 PIATMSSLADFIKTHF-GKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKP 132
Query: 97 -------ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS--- 146
T E N+ V ++++ PL + S + IV +SS G S
Sbjct: 133 EAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNET 192
Query: 147 ----------------------------------------VSLYGAYKGAMNQLTKNLAC 166
+ Y K +N T+ LA
Sbjct: 193 ALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLAN 252
Query: 167 EWAKDNIRTNTVAPWVIKTSMIKPFEVLSV 196
+ + N V P ++KT M +
Sbjct: 253 KI--PKFQVNCVCPGLVKTEMNYGIGNYTA 280
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 64.5 bits (157), Expect = 8e-13
Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 17/143 (11%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+V GT +G + LA GA V C R + A + FKV + + +
Sbjct: 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADD 179
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
R + ++ + + AI + SS + ++ A
Sbjct: 180 ASRAEAVKGA--------HFVFTAGAIGL----ELLPQAAWQNESSIEIVADYN----AQ 223
Query: 122 PLFKASGNGSIVFISSVGGVRGI 144
P G + GG R
Sbjct: 224 PPLGIGGIDATDKGKEYGGKRAF 246
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 58.0 bits (140), Expect = 3e-10
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 10/164 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVC 56
+ ++TGG G G + L GA +V T SR+ I ++ EW+ +G +V S
Sbjct: 1886 SYVITGGLGGFGLQLAQWLRLRGAQKLVLT-SRSGIRTGYQARQVREWRRQGVQVLVSTS 1944
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
+ SS + LI T G + + N A + + T E VS + +L
Sbjct: 1945 NASSLDGARSLITEATQ--LGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANL 2002
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160
++ V SSV RG + YG AM ++
Sbjct: 2003 DRVTREA--CPELDYFVIFSSVSCGRGNAGQANYGFANSAMERI 2044
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291 | Back alignment and structure |
|---|
Score = 56.1 bits (136), Expect = 6e-10
Identities = 37/142 (26%), Positives = 56/142 (39%), Gaps = 14/142 (9%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T ++TG G+G T ELAR GA V R+ + +A +V DL
Sbjct: 18 TVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG---QVEVRELDLQDL 74
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + V+ ++LINNA I V + T + + TN F L+ L
Sbjct: 75 SSVRRFADGVS-----GADVLINNAGIMAVPYAL--TVDGFESQIGTNHLGHFALTNLLL 127
Query: 122 PLFKASGNGSIVFISSVGGVRG 143
P +V +SS+ G
Sbjct: 128 PRLTD----RVVTVSSMAHWPG 145
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 3e-09
Identities = 25/150 (16%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE---- 111
CD++ + + + ++ K + ++ +I F P + + ++ V+ F+
Sbjct: 66 CDVAEDASIDTMFAELGKVW-PKFDGFVH--SIGFA-PGDQLDGDYVNAVTREGFKIAHD 121
Query: 112 -SVF---HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
S + +++ + +++ +S +G R IP+ ++ G K ++ + +A
Sbjct: 122 ISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANA 179
Query: 168 WAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
+ +R N ++ I+T S IK F +
Sbjct: 180 MGPEGVRVNAISAGPIRTLAASGIKDFRKM 209
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280 | Back alignment and structure |
|---|
Score = 52.6 bits (127), Expect = 9e-09
Identities = 32/150 (21%), Positives = 66/150 (44%), Gaps = 16/150 (10%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE---- 111
CD+ S ++ + L + ++ L+ +++ +IAF P + + V+ F
Sbjct: 82 CDVISDQEIKDLFVELGKVW-DGLDAIVH--SIAFA-PRDQLEGNFIDCVTREGFSIAHD 137
Query: 112 -SVF---HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
S + L++ + K S+V ++ +G + +PS + G K ++ + A
Sbjct: 138 ISAYSFAALAKEGRSMMKNRN-ASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALA 196
Query: 168 WAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
+D I+ N V+ IKT S I F+ +
Sbjct: 197 LGEDGIKVNAVSAGPIKTLAASGISNFKKM 226
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261 | Back alignment and structure |
|---|
Score = 52.2 bits (126), Expect = 1e-08
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 20/151 (13%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
D++ E+ + L V F G L+ L++ AIAF +D +D VS
Sbjct: 65 ADVTQDEELDALFAGVKEAF-GGLDYLVH--AIAFAPREAMEGRYIDTRRQDWLLALEVS 121
Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
+ + + +++ A PL + G IV ++ + +P ++ K A+ + LA
Sbjct: 122 AYSLVA---VARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAY 176
Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
E +R N ++ ++T I F +
Sbjct: 177 ELGPKGVRVNAISAGPVRTVAARSIPGFTKM 207
|
| >4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282 | Back alignment and structure |
|---|
Score = 52.3 bits (126), Expect = 2e-08
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 20/151 (13%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
D+ S E+ E + G ++ + + +IAF + + E +S
Sbjct: 91 IDVQSDEEVINGFEQIGKDV-GNIDGVYH--SIAFANMEDLRGRFSETSREGFLLAQDIS 147
Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
S + ++ A L GSIV + +GG + + ++ G K ++ K LA
Sbjct: 148 SYSLTI---VAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLAL 202
Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
+ DNIR N ++ I+T + F +
Sbjct: 203 DLGPDNIRVNAISAGPIRTLSAKGVGGFNTI 233
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 2e-08
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFE---- 111
CD++ Q + L ++ + + L+ L++ +I F P I + + ++ NF
Sbjct: 71 CDVADDAQIDALFASLKTHW-DSLDGLVH--SIGFA-PREAIAGDFLDGLTRENFRIAHD 126
Query: 112 -SVF---HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACE 167
S + L++ A P+ + S++ +S +G R IP+ + G K A+ + LA
Sbjct: 127 ISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVS 184
Query: 168 WAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
+R N ++ IKT S IK F +
Sbjct: 185 LGAKGVRVNAISAGPIKTLAASGIKSFGKI 214
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 3e-08
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 19/151 (12%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
CD+S E + L + + + G L+I+++ +IA+ +D + E +S
Sbjct: 78 CDVSLDEDIKNLKKFLEENW-GSLDIIVH--SIAYAPKEEFKGGVIDTSREGFKIAMDIS 134
Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
+ + L++ PL + G+IV +S G + +P ++ G K A+ + LA
Sbjct: 135 VYSLIA---LTRELLPLMEGRN-GAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAY 190
Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
+ AK R N ++ +KT I F +L
Sbjct: 191 DIAKHGHRINAISAGPVKTLAAYSITGFHLL 221
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 3e-08
Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
CD+++ + E ++ G ++ + + IAF ++ + +S
Sbjct: 66 CDVTNDAEIETCFASIKEQV-GVIHGIAH--CIAFANKEELVGEYLNTNRDGFLLAHNIS 122
Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
S + + + + A P+ GSIV ++ +GG +P+ ++ G K +++ K LA
Sbjct: 123 SYSLTA---VVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAA 177
Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
+ K+NIR N+++ I+T I F +
Sbjct: 178 DLGKENIRVNSISAGPIRTLSAKGISDFNSI 208
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-08
Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 20/151 (13%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
D+S E + L +V G L+ +++ ++AF ++ + +T +S
Sbjct: 63 LDVSKEEHFKSLYNSVKKDL-GSLDFIVH--SVAFAPKEALEGSLLETSKSAFNTAMEIS 119
Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
+ L+ PL S++ +S +G + + ++ G K A+ + LA
Sbjct: 120 VYSLIE---LTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAV 174
Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
+ K +IR N ++ I+T S I F ++
Sbjct: 175 DLGKHHIRVNALSAGPIRTLASSGIADFRMI 205
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296 | Back alignment and structure |
|---|
Score = 50.3 bits (121), Expect = 7e-08
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
CD+S E + + + + + G L+ +++ A+AF VD + + T +S
Sbjct: 87 CDVSDAESVDNMFKVLAEEW-GSLDFVVH--AVAFSDKNELKGRYVDTSLGNFLTSMHIS 143
Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
+F ++ A PL GSI+ +S G + +P ++ G K A+ K LA
Sbjct: 144 CYSFTY---IASKAEPLMT--NGGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAV 198
Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
+ K IR N ++ ++T S I F +
Sbjct: 199 DLGKQQIRVNAISAGPVRTLASSGISDFHYI 229
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 1e-07
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVK------PTVDITAEDMST---VS 106
CD++ + + ET+ + GKL+ L++ AI F +D + + + +S
Sbjct: 88 CDVADAASIDAVFETLEKKW-GKLDFLVH--AIGFSDKDELTGRYIDTSEANFTNTMLIS 144
Query: 107 STNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLAC 166
+ + +S+ A L GSI+ ++ G + +P+ ++ G K A+ K LA
Sbjct: 145 VYSLTA---VSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAV 199
Query: 167 EWAKDNIRTNTVAPWVIKT---SMIKPFEVL 194
+ NIR N ++ IKT S I F +
Sbjct: 200 DLGPQNIRVNAISAGPIKTLAASGIGDFRYI 230
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496 | Back alignment and structure |
|---|
Score = 48.6 bits (116), Expect = 3e-07
Identities = 47/164 (28%), Positives = 64/164 (39%), Gaps = 27/164 (16%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSR------NQIELDARLHEWKNKGFKVTG 53
+ LVTGGT GIG LA GA +V T SR EL A L + G +VT
Sbjct: 241 SVLVTGGTGGIGGRVARRLAEQGAAHLVLT-SRRGADAPGAAELRAELEQ---LGVRVTI 296
Query: 54 SVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFES 112
+ CD + RE L+ + L + ++A +A P D+T + + +
Sbjct: 297 AACDAADREALAALLAELPE--DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTA 354
Query: 113 VFHLSQLA--HPL--FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
HL +L L F V SS V G Y A
Sbjct: 355 ARHLHELTADLDLDAF--------VLFSSGAAVWGSGGQPGYAA 390
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} Length = 525 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 7e-07
Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 18/167 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSR-------------NQIELDARLHEWKN 46
T LVTG LAR GA ++ + L + E +
Sbjct: 253 TVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD 312
Query: 47 KGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVS 106
G T CDL+ E +L+ V+ L+ +++ +P A+ ++ V
Sbjct: 313 LGATATVVTCDLTDAEAAARLLAGVSD--AHPLSAVLHLPPTVDSEPLAATDADALARVV 370
Query: 107 STNFESVFHLSQL-AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152
+ + HL +L +V SSV + G Y A
Sbjct: 371 TAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYAA 417
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-06
Identities = 43/163 (26%), Positives = 61/163 (37%), Gaps = 26/163 (15%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSR------NQIELDARLHEWKNKGFKVTG 53
T LVTGGT G+G LAR GA ++ SR EL A L G + T
Sbjct: 228 TVLVTGGTGGVGGQIARWLARRGAPHLLLV-SRSGPDADGAGELVAELEA---LGARTTV 283
Query: 54 SVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV 113
+ CD++ RE +L+ + L+ + + AA +T E + S
Sbjct: 284 AACDVTDRESVRELLGGIGD--DVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGA 341
Query: 114 FHLSQLA--HPL--FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
+L +L L F V SS G P + Y
Sbjct: 342 RNLHELTRELDLTAF--------VLFSSFASAFGAPGLGGYAP 376
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-06
Identities = 38/168 (22%), Positives = 58/168 (34%), Gaps = 37/168 (22%)
Query: 2 TALVTGGTRGIGHATVEELA-RFGA--IVHTCSRNQI---ELDARLHEWKNKGFKVTGSV 55
T LVTGGT +G L G +V SR + + G +V+
Sbjct: 532 TVLVTGGTGALGAEVARHLVIERGVRNLVLV-SRRGPAASGAAELVAQLTAYGAEVSLQA 590
Query: 56 CDLSSREQREKLIET------VTSIFQGKLNILINNAAIAFV---KPTVDITAEDMSTVS 106
CD++ RE K++ + +T++ A V + +T E + V
Sbjct: 591 CDVADRETLAKVLASIPDEHPLTAVVHA-----------AGVLDDGVSESLTVERLDQVL 639
Query: 107 STNFESVFHLSQLAHPL--FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
+ +L +L P V SSV GV G Y A
Sbjct: 640 RPKVDGARNLLELIDPDVAL--------VLFSSVSGVLGSGGQGNYAA 679
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269 | Back alignment and structure |
|---|
Score = 43.4 bits (103), Expect = 1e-05
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
Query: 56 CDLSSREQREKLIETVTSIF--QGKLNILINNAAIAFVKPT-------VDITAEDMST-- 104
D+ + E L VT KL+ +++ +I F+ T D D+S
Sbjct: 63 LDVQNEEHLASLAGRVTEAIGAGNKLDGVVH--SIGFMPQTGMGINPFFDAPYADVSKGI 120
Query: 105 -VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN 163
+S+ ++ S +++ P+ GSIV + R +P+ + K A+ + +
Sbjct: 121 HISAYSYAS---MAKALLPIMNP--GGSIVGMDF-DPSRAMPAYNWMTVAKSALESVNRF 174
Query: 164 LACEWAKDNIRTNTVAPWVIKT 185
+A E K +R+N VA I+T
Sbjct: 175 VAREAGKYGVRSNLVAAGPIRT 196
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 2e-05
Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 26/151 (17%)
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAF----VKPTVDITAEDMST---VSST 108
++ E + + + GK+N+L++ ++A K ++ + + SS
Sbjct: 92 YNMLQNYTIEDVANLIHQKY-GKINMLVH--SLANAKEVQKDLLNTSRKGYLDALSKSSY 148
Query: 109 NFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLY----GAYKGAMNQLTKNL 164
+ S L + + K SI+ ++ + +P Y + K A+ T+ L
Sbjct: 149 SLIS---LCKYFVNIMK--PQSSIISLTYHASQKVVPG---YGGGMSSAKAALESDTRVL 200
Query: 165 ACEW-AKDNIRTNTVAPWVIKT---SMIKPF 191
A NIR NT++ +K+ + I
Sbjct: 201 AYHLGRNYNIRINTISAGPLKSRAATAINKL 231
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 4e-05
Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 17/143 (11%)
Query: 56 CDLSSREQREKLIE-TVTSIFQ------GKLNILINNAAIAF----VKPTVDITAEDMST 104
D+ ++ + T+ + G ++IL++ ++A KP ++ + +
Sbjct: 91 QDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH--SLANGPEVTKPLLETSRKGYLA 148
Query: 105 VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-VSLYGAYKGAMNQLTKN 163
SS + S L Q P+ GS V +S + R +P + K A+ T+
Sbjct: 149 ASSNSAYSFVSLLQHFGPIMNE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRT 206
Query: 164 LACEW-AKDNIRTNTVAPWVIKT 185
LA E K +R N ++ +K+
Sbjct: 207 LAWEAGQKYGVRVNAISAGPLKS 229
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319 | Back alignment and structure |
|---|
Score = 42.1 bits (99), Expect = 4e-05
Identities = 30/146 (20%), Positives = 63/146 (43%), Gaps = 23/146 (15%)
Query: 56 CDLSSREQREKLIE-TVTSIFQ------GKLNILINNAAIAF----VKPTVDITAEDMST 104
++SS ++ + T++ + + G+++IL++ ++A KP + + +
Sbjct: 104 PEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVH--SLANGPEVTKPLLQTSRKGYLA 161
Query: 105 VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLY----GAYKGAMNQL 160
S++ S L Q PL K GS + +S + + IP Y + K A+
Sbjct: 162 AVSSSSYSFVSLLQHFLPLMKE--GGSALALSYIASEKVIPG---YGGGMSSAKAALESD 216
Query: 161 TKNLACEW-AKDNIRTNTVAPWVIKT 185
+ LA E +R N ++ +K+
Sbjct: 217 CRTLAFEAGRARAVRVNCISAGPLKS 242
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} Length = 511 | Back alignment and structure |
|---|
Score = 42.5 bits (100), Expect = 5e-05
Identities = 43/164 (26%), Positives = 55/164 (33%), Gaps = 31/164 (18%)
Query: 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSR------NQIELDARLHEWKNKGFKVTG 53
T L+TGG IG LA GA +V T SR EL L G +V
Sbjct: 261 TVLITGGMGAIGRRLARRLAAEGAERLVLT-SRRGPEAPGAAELAEELRG---HGCEVVH 316
Query: 54 SVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESV 113
+ CD++ R+ L+ N + + A I ++ E TV
Sbjct: 317 AACDVAERDALAALVTAYP------PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGA 370
Query: 114 FHLSQL---AHPL--FKASGNGSIVFISSVGGVRGIPSVSLYGA 152
L QL L F V SSV G G Y A
Sbjct: 371 ELLHQLTADIKGLDAF--------VLFSSVTGTWGNAGQGAYAA 406
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 6e-05
Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 14/145 (9%)
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVF 114
SS ++ E V F G ++IL++ ++A KP ++ + + S + S
Sbjct: 101 SSNWTVQEAAECVRQDF-GSIDILVH--SLANGPEVSKPLLETSRKGYLAAISASSYSFV 157
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLY-GAYKGAMNQLTKNLACEW-AKDN 172
L P+ G+ + ++ + R IP + K A+ T+ LA E K N
Sbjct: 158 SLLSHFLPIMNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQN 215
Query: 173 IRTNTVAPWVIKT---SMIKPFEVL 194
IR NT++ + + I + +
Sbjct: 216 IRVNTISAGPLGSRAAKAIGFIDTM 240
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} Length = 422 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 2e-04
Identities = 32/234 (13%), Positives = 62/234 (26%), Gaps = 50/234 (21%)
Query: 2 TALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQIELDARL------------HEWKNKG 48
LV G + G G A+ A FGA + ++ K G
Sbjct: 63 KVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG 122
Query: 49 FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI-------------------- 88
D S R ++IE + + G++++++ + A
Sbjct: 123 LYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIG 182
Query: 89 -AFVKPTVDITAEDM--------------STVSSTNFESVFHLSQLAHPLFKASGNGSIV 133
+ +D + + T++ + + V
Sbjct: 183 QTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSV 242
Query: 134 FISSVGGVRGIP--SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185
S +G P G K +++ + L AK N + T
Sbjct: 243 AFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVT 296
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 202 | |||
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 100.0 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 100.0 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 100.0 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 100.0 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 100.0 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 100.0 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 100.0 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 100.0 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 100.0 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 100.0 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 100.0 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 100.0 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 100.0 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 100.0 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 100.0 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 100.0 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 100.0 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 100.0 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 100.0 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 100.0 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 100.0 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 100.0 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 100.0 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 100.0 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 100.0 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 100.0 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 100.0 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 100.0 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 100.0 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 100.0 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 100.0 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 100.0 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 100.0 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 100.0 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 100.0 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 100.0 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 100.0 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 100.0 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 100.0 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 100.0 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 100.0 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 100.0 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 100.0 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 100.0 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 100.0 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 100.0 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 100.0 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 100.0 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 100.0 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 100.0 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 100.0 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 100.0 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 100.0 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 100.0 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 100.0 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 100.0 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 100.0 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 100.0 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 100.0 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 100.0 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 100.0 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 100.0 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 100.0 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 100.0 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 100.0 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 100.0 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 100.0 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 100.0 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 100.0 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 100.0 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 100.0 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 100.0 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 100.0 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 100.0 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 100.0 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 100.0 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 100.0 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 100.0 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 100.0 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 100.0 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 100.0 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 100.0 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 100.0 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 100.0 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 100.0 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 100.0 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 100.0 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 100.0 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 100.0 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 100.0 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 100.0 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 100.0 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 100.0 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 100.0 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 100.0 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 100.0 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 100.0 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 100.0 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 100.0 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 100.0 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 100.0 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 100.0 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 100.0 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 100.0 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 100.0 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 100.0 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 100.0 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 100.0 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 100.0 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 100.0 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 100.0 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 100.0 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 100.0 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 100.0 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 100.0 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 100.0 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 100.0 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 100.0 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 100.0 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 100.0 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 100.0 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 100.0 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 100.0 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 100.0 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 100.0 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 100.0 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 100.0 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 100.0 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 100.0 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 100.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 100.0 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 100.0 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 100.0 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 100.0 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 100.0 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 100.0 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 100.0 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 100.0 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 100.0 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 100.0 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 100.0 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 100.0 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 100.0 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 100.0 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 100.0 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 100.0 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 100.0 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 100.0 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 100.0 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 100.0 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 100.0 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 100.0 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 100.0 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 100.0 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 100.0 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 100.0 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 100.0 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 100.0 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 100.0 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 100.0 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 100.0 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 100.0 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 100.0 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 100.0 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 100.0 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 100.0 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 100.0 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 100.0 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 100.0 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 100.0 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 100.0 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 100.0 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 100.0 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 100.0 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 100.0 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 100.0 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 100.0 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 100.0 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 100.0 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 100.0 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 100.0 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 100.0 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 100.0 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 100.0 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 100.0 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 100.0 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 100.0 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 100.0 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 100.0 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 100.0 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 100.0 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 100.0 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 100.0 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 100.0 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.98 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.98 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.98 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.97 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.97 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.97 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.97 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.96 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.95 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.93 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.93 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.93 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.93 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.93 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.92 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.92 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.92 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.92 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 99.92 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.92 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.92 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.91 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.91 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.91 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.91 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.9 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.9 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.9 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.9 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.9 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.9 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.89 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.89 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.89 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.89 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.89 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.89 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.89 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.89 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.89 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.89 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.88 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.88 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.88 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.88 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.88 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.88 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.88 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.88 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.88 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.88 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.87 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.87 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.87 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.87 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.87 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.87 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.87 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.86 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.86 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.86 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.85 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.85 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.85 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.85 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.85 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.85 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.85 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.85 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.84 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.84 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.83 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.83 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.83 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.82 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.81 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.81 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.8 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.79 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.79 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.79 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.78 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.76 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.76 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.74 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.74 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.74 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.71 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.71 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.7 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.69 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.69 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.67 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.67 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.66 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.65 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.64 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.62 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.49 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.38 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.38 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 99.06 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.0 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.99 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.95 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 98.92 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.74 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 98.7 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 98.69 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.67 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 98.66 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.64 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 98.56 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 98.55 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 98.53 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.53 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 98.51 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 98.5 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 98.49 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 98.48 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 98.46 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.46 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.44 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 98.43 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 98.43 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.43 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 98.41 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 98.4 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 98.4 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.35 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 98.33 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 98.33 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.31 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.29 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.23 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 98.22 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 98.2 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 98.19 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 98.19 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 98.18 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 98.17 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 98.13 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.09 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 98.08 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 98.08 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.06 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 98.06 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 98.05 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 98.03 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.01 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.96 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.96 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 97.95 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.94 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 97.94 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.93 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.93 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.87 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 97.85 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.82 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.82 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 97.8 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.74 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 97.73 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 97.73 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.73 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.73 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.71 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.69 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.66 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 97.65 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 97.64 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 97.61 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.59 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 97.57 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 97.57 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 97.57 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 97.56 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.54 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.53 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.53 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 97.52 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 97.51 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 97.48 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 97.48 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.46 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 97.42 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 97.42 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 97.38 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 97.37 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 97.36 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.35 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 97.34 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.33 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 97.32 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 97.31 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.3 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.29 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 97.26 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.25 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.23 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 97.22 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.19 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 97.17 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 97.14 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 97.12 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 97.11 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 97.1 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 97.08 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.07 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.06 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.05 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 97.05 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 97.05 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 97.05 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 97.04 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.02 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 97.01 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.01 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.01 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.97 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.96 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 96.96 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 96.95 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 96.91 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 96.89 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.88 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.88 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 96.87 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 96.87 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.86 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 96.84 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 96.82 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.8 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.79 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 96.79 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 96.78 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 96.78 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 96.77 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 96.76 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.76 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 96.75 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 96.74 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 96.73 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 96.73 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 96.72 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 96.71 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.69 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 96.69 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.65 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.63 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 96.6 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 96.6 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.59 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 96.59 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 96.52 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 96.5 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 96.49 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 96.48 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.45 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 96.43 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 96.41 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.41 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.41 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 96.38 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 96.35 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.33 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 96.33 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 96.3 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.29 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 96.27 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 96.22 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.21 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 96.2 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 96.18 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.14 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.11 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.11 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 96.09 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 96.03 | |
| 3ado_A | 319 | Lambda-crystallin; L-gulonate 3-dehydrogenase, str | 95.98 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 95.97 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 95.97 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 95.97 |
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-51 Score=315.47 Aligned_cols=190 Identities=27% Similarity=0.384 Sum_probs=182.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++.+|++|+++++++++++.++| ++||
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G~iD 86 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY-SRID 86 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 799999999999999999999999999999999999999999999889999999999999999999999999999 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||+.. ..++.+.+.++|++++++|+.|+++++|+++|+|.+++.|+||++||.++..+.|+...|++||+++.+
T Consensus 87 iLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ 166 (254)
T 4fn4_A 87 VLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIG 166 (254)
T ss_dssp EEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHHHH
T ss_pred EEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHHHH
Confidence 9999999764 568899999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
|+|+|+.|++++|||||+|+||+|+|||....
T Consensus 167 ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~ 198 (254)
T 4fn4_A 167 LTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGS 198 (254)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSSCTTSC
T ss_pred HHHHHHHHhhhhCeEEEEEEeCCCCCcccccc
Confidence 99999999999999999999999999987543
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-50 Score=312.11 Aligned_cols=191 Identities=34% Similarity=0.441 Sum_probs=183.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.++..+.+|++|+++++++++++.++| ++||
T Consensus 10 KvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD 88 (255)
T 4g81_D 10 KTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG-IHVD 88 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT-CCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC-CCCc
Confidence 799999999999999999999999999999999999999999999888899999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||+....++.+.+.++|++++++|+.|+++++|+++|+|.+ ++.|+||++||.++..+.|+...|++||+++.+
T Consensus 89 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ 168 (255)
T 4g81_D 89 ILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKM 168 (255)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHHH
Confidence 9999999998899999999999999999999999999999999965 467999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+|+++.|++++|||||+|+||+|+|||.....
T Consensus 169 ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~ 201 (255)
T 4g81_D 169 LTCSMAAEWAQFNIQTNAIGPGYILTDMNTALI 201 (255)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHH
T ss_pred HHHHHHHHhcccCeEEEEEeeCCCCCchhhccc
Confidence 999999999999999999999999999987544
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-48 Score=303.81 Aligned_cols=186 Identities=28% Similarity=0.396 Sum_probs=171.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++..+.+|++|+++++++++++.++| ++||
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD 105 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA-GRID 105 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-SCEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 78999999999999999999999999999999999998887776 5578899999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+....++.+.+.++|++++++|+.|+++++|+++|+|++ .|+||++||.++..+.|+...|++||+|+.+|
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~~~~~~~~~~~~Y~asKaav~~l 183 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGSTAGSTGTPAFSVYAASKAALRSF 183 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGGSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeehhhccCCCCchHHHHHHHHHHHH
Confidence 9999999998899999999999999999999999999999999976 58999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+|+.|++++|||||+|+||+|+||+..+..
T Consensus 184 tr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~ 215 (273)
T 4fgs_A 184 ARNWILDLKDRGIRINTLSPGPTETTGLVELA 215 (273)
T ss_dssp HHHHHHHTTTSCEEEEEEEECSBCC-------
T ss_pred HHHHHHHhcccCeEEEEEeeCCCCChhHHHhh
Confidence 99999999999999999999999999876543
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-47 Score=295.02 Aligned_cols=186 Identities=20% Similarity=0.266 Sum_probs=171.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++.. +.+.++.++.+|++|+++++++++++.++| ++||
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~iD 77 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA----KERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRID 77 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----TTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 89999999999999999999999999999999987766544 345678999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.|++.++|++.|+|.++ .|+||++||..+..+.|+...|++||+++.+|
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~~~~~~Y~asKaal~~l 156 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSEPDSEAYASAKGGIVAL 156 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCCCCCHHHHHHHHHHHHH
Confidence 99999999988899999999999999999999999999999999876 49999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+|+++.|+++ |||||+|+||+|+|++..+..+
T Consensus 157 tk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~~ 188 (247)
T 3ged_A 157 THALAMSLGP-DVLVNCIAPGWINVTEQQEFTQ 188 (247)
T ss_dssp HHHHHHHHTT-TSEEEEEEECSBCCCC---CCH
T ss_pred HHHHHHHHCC-CCEEEEEecCcCCCCCcHHHHH
Confidence 9999999987 9999999999999998876544
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-47 Score=295.53 Aligned_cols=188 Identities=27% Similarity=0.323 Sum_probs=170.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++..+ ..+++.+.+.++.++.+|++|+++++++++++.++| ++||
T Consensus 8 KvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-G~iD 85 (258)
T 4gkb_A 8 KVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF-GRLD 85 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence 79999999999999999999999999999999987754 445566667789999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+.... ..+.+.++|++.+++|+.|++.++|+++|+|+++ .|+||++||.++..+.|+...|++||+++.+|
T Consensus 86 iLVNnAGi~~~~-~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~l 163 (258)
T 4gkb_A 86 GLVNNAGVNDGI-GLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSKTAVTGQGNTSGYCASKGAQLAL 163 (258)
T ss_dssp EEEECCCCCCCC-CTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTHHHHCCSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCC-CccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeehhhccCCCCchHHHHHHHHHHHH
Confidence 999999987544 4578999999999999999999999999999865 59999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+++.|++++|||||+|+||+|+|||.+...
T Consensus 164 tr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~ 195 (258)
T 4gkb_A 164 TREWAVALREHGVRVNAVIPAEVMTPLYRNWI 195 (258)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBCCSCC----
T ss_pred HHHHHHHhcccCeEEEEEecCCCCChhHhhhh
Confidence 99999999999999999999999999987543
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-47 Score=294.80 Aligned_cols=184 Identities=29% Similarity=0.351 Sum_probs=169.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.+ ++..+++.+.+.++..+.+|++|+++++++++ + ++||
T Consensus 10 KvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~-g~iD 81 (247)
T 4hp8_A 10 RKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----D-AGFD 81 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----T-TCCC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----h-CCCC
Confidence 79999999999999999999999999999999864 35566677778899999999999998877764 3 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||+....++.+.+.++|++++++|+.|+++++|+++|+|.++ +.|+||++||..+..+.|+...|++||+++.+
T Consensus 82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ 161 (247)
T 4hp8_A 82 ILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAG 161 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHH
Confidence 99999999988999999999999999999999999999999999765 47999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+|+++.|++++|||||+|+||+|+|||.....
T Consensus 162 ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~ 194 (247)
T 4hp8_A 162 LTKLLANEWAAKGINVNAIAPGYIETNNTEALR 194 (247)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHH
T ss_pred HHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcc
Confidence 999999999999999999999999999987543
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-46 Score=285.87 Aligned_cols=178 Identities=32% Similarity=0.474 Sum_probs=159.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.++. ..+.++..+.+|++|++++++++++ + ++||
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~~----~-g~iD 80 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFEA----L-PRLD 80 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHHH----C-SCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHHh----c-CCCC
Confidence 799999999999999999999999999999999876543 2345789999999999999887754 5 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+. .+..+.+.++|++++++|+.|++.++|+++|+|+++ .|+||++||.++..+.|+...|++||+++.+|
T Consensus 81 iLVNNAGi~--~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaav~~l 157 (242)
T 4b79_A 81 VLVNNAGIS--RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQR-GGSILNIASMYSTFGSADRPAYSASKGAIVQL 157 (242)
T ss_dssp EEEECCCCC--CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-CEEEEEECCGGGTSCCSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeeccccCCCCCCHHHHHHHHHHHHH
Confidence 999999985 367788999999999999999999999999999865 59999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+|+.|++++|||||+|+||+|+|||.....
T Consensus 158 tr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~ 189 (242)
T 4b79_A 158 TRSLACEYAAERIRVNAIAPGWIDTPLGAGLK 189 (242)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCC-----C
T ss_pred HHHHHHHhhhcCeEEEEEEeCCCCChhhhccc
Confidence 99999999999999999999999999986543
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-45 Score=285.29 Aligned_cols=181 Identities=25% Similarity=0.296 Sum_probs=165.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.++ ...+..++++|++++++++++++++.++| +++|
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD 80 (261)
T 4h15_A 12 KRALITAGTKGAGAATVSLFLELGAQVLTTARARPE----------GLPEELFVEADLTTKEGCAIVAEATRQRL-GGVD 80 (261)
T ss_dssp CEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT----------TSCTTTEEECCTTSHHHHHHHHHHHHHHT-SSCS
T ss_pred CEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh----------CCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 799999999999999999999999999999997542 11234578899999999999999999999 7999
Q ss_pred EEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC-CChhhhhhHHHH
Q 028868 81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~y~asK~a~ 157 (202)
++|||||+.. ..++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||..+..+.| +...|++||+|+
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal 160 (261)
T 4h15_A 81 VIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAAL 160 (261)
T ss_dssp EEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHH
T ss_pred EEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHH
Confidence 9999999763 3578899999999999999999999999999999988889999999999999876 678999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
.+|+|+++.|++++|||||+|+||+|+||+.....
T Consensus 161 ~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~ 195 (261)
T 4h15_A 161 STYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLA 195 (261)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHH
T ss_pred HHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhh
Confidence 99999999999999999999999999999876543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-44 Score=278.96 Aligned_cols=188 Identities=34% Similarity=0.482 Sum_probs=179.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++...+++.+.+.++.++.+|++|+++++++++++.+++ +++|
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id 91 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF-GKIT 91 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999999999999988888889999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++ +.+.++|+..+++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||+++++|
T Consensus 92 ~lv~nAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 170 (256)
T 3gaf_A 92 VLVNNAGGGGPKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHL 170 (256)
T ss_dssp EEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHH
Confidence 99999999877777 88999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|++++||+||+|+||+++|++...
T Consensus 171 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 200 (256)
T 3gaf_A 171 TRNIAFDVGPMGIRVNAIAPGAIKTDALAT 200 (256)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred HHHHHHHHhhhCcEEEEEEEccccCchhhh
Confidence 999999999999999999999999998754
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-44 Score=278.45 Aligned_cols=191 Identities=28% Similarity=0.411 Sum_probs=181.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|+++ +|+.+.++...+++.+.+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 83 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-GRL 83 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999986 899999999888888778889999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||+++++
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 163 (258)
T 3oid_A 84 DVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEA 163 (258)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence 99999999888888889999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+++++.|++++||+||+|+||+++|++.....
T Consensus 164 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~ 196 (258)
T 3oid_A 164 LTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP 196 (258)
T ss_dssp HHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT
T ss_pred HHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc
Confidence 999999999999999999999999999987553
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-44 Score=277.35 Aligned_cols=191 Identities=18% Similarity=0.227 Sum_probs=171.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|+++++++++++.+. +++|
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~id 85 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--APLE 85 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SCEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CCce
Confidence 68999999999999999999999999999999999999999999888889999999999999999999999888 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||+++++|
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 165 (252)
T 3h7a_A 86 VTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAV 165 (252)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHH
Confidence 99999999888888899999999999999999999999999999988789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEE-EEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRT-NTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v-~~v~pG~v~t~~~~~~~~ 193 (202)
+++++.|+++.||+| |+|+||+++|++.....+
T Consensus 166 ~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~ 199 (252)
T 3h7a_A 166 AQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE 199 (252)
T ss_dssp HHHHHHHHGGGTEEEEEEEEC-------------
T ss_pred HHHHHHHhhhcCCEEEEEecCCccCChhhhccch
Confidence 999999999999999 999999999999876543
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=278.35 Aligned_cols=191 Identities=27% Similarity=0.340 Sum_probs=180.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCC-eEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGF-KVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++.. .+. ++.++.+|++|+++++++++++.+.+ ++
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~ 87 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL-GC 87 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH-CS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence 6899999999999999999999999999999999999998888876 333 59999999999999999999999999 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++|||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.|+||++||..+..+.++...|++||++++
T Consensus 88 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 167 (265)
T 3lf2_A 88 ASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVK 167 (265)
T ss_dssp CSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHHH
Confidence 99999999998888899999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+++++.|++++||+||+|+||+++|++.....
T Consensus 168 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 201 (265)
T 3lf2_A 168 NLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRF 201 (265)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHH
T ss_pred HHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhh
Confidence 9999999999999999999999999999876543
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=278.33 Aligned_cols=189 Identities=24% Similarity=0.415 Sum_probs=173.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 83 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTW-GRID 83 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999999999999998888899999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+.++++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||+++++|
T Consensus 84 ~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l 163 (264)
T 3tfo_A 84 VLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAI 163 (264)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHHH
Confidence 99999999888888999999999999999999999999999999988789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++++.|+ + ||+||+|+||+|+|++.....
T Consensus 164 ~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~ 193 (264)
T 3tfo_A 164 SDGLRQES-T-NIRVTCVNPGVVESELAGTIT 193 (264)
T ss_dssp HHHHHHHC-S-SEEEEEEEECCC---------
T ss_pred HHHHHHhC-C-CCEEEEEecCCCcCccccccc
Confidence 99999998 4 999999999999999986543
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-44 Score=277.92 Aligned_cols=189 Identities=20% Similarity=0.186 Sum_probs=174.0
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+| |||+++|++|+++|++|++++|+++.++++.+++.+.+ .++.++++|++|+++++++++++.+++ +
T Consensus 7 K~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G 85 (256)
T 4fs3_A 7 KTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV-G 85 (256)
T ss_dssp CEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 8999999876 99999999999999999999999999988888887654 478999999999999999999999999 7
Q ss_pred CccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 78 KLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 78 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
++|++|||||+... .++.+.+.++|+..+++|+.+++.+++.+.|++++ .|+||++||.++..+.|+...|++|
T Consensus 86 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~IVnisS~~~~~~~~~~~~Y~as 163 (256)
T 4fs3_A 86 NIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE--GGSIVATTYLGGEFAVQNYNVMGVA 163 (256)
T ss_dssp CCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT--CEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred CCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCEEEEEeccccccCcccchhhHHH
Confidence 99999999998643 34567899999999999999999999999988864 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+++.+|+|+|+.|++++|||||+|+||+++|++.+...
T Consensus 164 Kaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~ 202 (256)
T 4fs3_A 164 KASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG 202 (256)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc
Confidence 999999999999999999999999999999999986543
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-43 Score=279.18 Aligned_cols=190 Identities=31% Similarity=0.415 Sum_probs=179.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.+++++..+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 107 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF-GHLD 107 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999999999999988778889999999999999999999999999 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc--CCCCChhhhhhHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR--GIPSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--~~~~~~~y~asK~a~ 157 (202)
++|||||+.. ..++.+.+.++|++.+++|+.|++.++++++|+|++++.|+||++||.++.. +.++...|++||+++
T Consensus 108 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~ 187 (283)
T 3v8b_A 108 IVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQ 187 (283)
T ss_dssp EEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHHH
Confidence 9999999864 3788899999999999999999999999999999988889999999999987 778899999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++++.|++++||+||+|+||+++|++....
T Consensus 188 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 221 (283)
T 3v8b_A 188 VAIVQQLALELGKHHIRVNAVCPGAIETNISDNT 221 (283)
T ss_dssp HHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCT
T ss_pred HHHHHHHHHHhCccCcEEEEEEeCCCcCCccccc
Confidence 9999999999999999999999999999998654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=277.07 Aligned_cols=189 Identities=31% Similarity=0.425 Sum_probs=179.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+ .++.++.+|++|+++++++++++.+++ +++
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 89 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF-GGI 89 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh-CCC
Confidence 789999999999999999999999999999999999999988887765 689999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~ 158 (202)
|++|||||.....++.+.+.++|++.+++|+.|++.++++++|+|++++.++||++||..+. .+.++...|++||++++
T Consensus 90 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~ 169 (262)
T 3pk0_A 90 DVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQL 169 (262)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHHHH
Confidence 99999999988888999999999999999999999999999999998878999999999986 78899999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++++.|++++||+||+|+||+++|++...
T Consensus 170 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 201 (262)
T 3pk0_A 170 GFMRTAAIELAPHKITVNAIMPGNIMTEGLLE 201 (262)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCCHHHHT
T ss_pred HHHHHHHHHHHhhCcEEEEEEeCcCcCccccc
Confidence 99999999999999999999999999997654
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-44 Score=280.06 Aligned_cols=190 Identities=30% Similarity=0.442 Sum_probs=182.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 105 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG-IDVD 105 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT-CCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence 689999999999999999999999999999999999999999998888889999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||+....++.+.+.++|+..+++|+.|++.++++++|+|.+++.|+||++||..+..+.++...|++||+++++|
T Consensus 106 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l 185 (271)
T 4ibo_A 106 ILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKML 185 (271)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHHH
Confidence 99999999888888899999999999999999999999999999988789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+++.||+||+|+||+++|++....
T Consensus 186 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 216 (271)
T 4ibo_A 186 TRAMAAEWAQYGIQANAIGPGYMLTDMNQAL 216 (271)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred HHHHHHHHhhhCeEEEEEEeccEeCcchhhc
Confidence 9999999999999999999999999997654
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-43 Score=277.87 Aligned_cols=189 Identities=27% Similarity=0.341 Sum_probs=178.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|++|||||++|||+++|++|+++|++|++++|+ .+.++...+++...+.++.++.+|++|++++++++
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 689999999999999999999999999999997 66677777777777888999999999999999999
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCCh
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVS 148 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~ 148 (202)
+++.+.+ +++|++|||||+....++.+.+.++|++.+++|+.|++.++++++|+|.+++.|+||++||..+..+.++..
T Consensus 91 ~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 169 (281)
T 3s55_A 91 AEAEDTL-GGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQA 169 (281)
T ss_dssp HHHHHHH-TCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTTCH
T ss_pred HHHHHhc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCCCc
Confidence 9999999 799999999999888888999999999999999999999999999999887789999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.|++||+++++|+++++.|++++||+||+|+||+|+||+...
T Consensus 170 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 211 (281)
T 3s55_A 170 SYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHN 211 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSS
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccc
Confidence 999999999999999999999999999999999999999764
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-43 Score=275.63 Aligned_cols=187 Identities=32% Similarity=0.400 Sum_probs=176.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.++...+++.. ....+.+|++|+++++++++++.+++ +++|
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 85 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDEF-GGVD 85 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHH-CCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999999999999988888777644 47789999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+....++.+.+.++|++.+++|+.|++.++++++|+|.+++.|+||++||.++..+.++...|++||+++++|
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l 165 (248)
T 3op4_A 86 ILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGF 165 (248)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHH
Confidence 99999999888888899999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|++++||+||+|+||+++|++.+..
T Consensus 166 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 196 (248)
T 3op4_A 166 TKSMAREVASRGVTVNTVAPGFIETDMTKAL 196 (248)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBSSTTTTTS
T ss_pred HHHHHHHHHHhCeEEEEEeeCCCCCchhhhc
Confidence 9999999999999999999999999998654
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=274.06 Aligned_cols=191 Identities=32% Similarity=0.412 Sum_probs=179.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|+++++ +.++++...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 83 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-GSL 83 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999998877 5677888888888778889999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||||.....++.+.+.++|++.+++|+.|++.++++++|+|.+++.|+||++||.++..+.++...|++||+++++
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 163 (246)
T 3osu_A 84 DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIG 163 (246)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHH
Confidence 99999999988888889999999999999999999999999999988788999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++++++.|++++||+||+|+||+++|++.....
T Consensus 164 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 196 (246)
T 3osu_A 164 LTKSAARELASRGITVNAVAPGFIVSDMTDALS 196 (246)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC
T ss_pred HHHHHHHHhcccCeEEEEEEECCCcCCcccccC
Confidence 999999999999999999999999999876543
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=277.37 Aligned_cols=189 Identities=29% Similarity=0.452 Sum_probs=179.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-------------ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-------------NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~ 67 (202)
|++|||||++|||+++|++|+++|++|++++| +.+++++..+++...+.++.++.+|++|+++++++
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 68999999999999999999999999999998 67788888888887788899999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCC
Q 028868 68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPS 146 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~ 146 (202)
++++.+.+ +++|+||||||.....++.+.+.++|++++++|+.|++.++++++|+|.+++ .|+||++||..+..+.++
T Consensus 96 ~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 174 (280)
T 3pgx_A 96 VADGMEQF-GRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPG 174 (280)
T ss_dssp HHHHHHHH-CCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTT
T ss_pred HHHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCC
Confidence 99999999 7999999999998888888999999999999999999999999999998764 789999999999999999
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
...|++||+++++|+++++.|++++||+||+|+||+++|++..+
T Consensus 175 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 218 (280)
T 3pgx_A 175 NGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEP 218 (280)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCH
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccch
Confidence 99999999999999999999999999999999999999999864
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-43 Score=273.94 Aligned_cols=189 Identities=27% Similarity=0.376 Sum_probs=177.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id 85 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-GRID 85 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 789999999999999999999999999999999999999988887777889999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHH-hcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|+..+++|+.|++.++++++|+| +++..|+||++||..+..+.++...|++||+++++
T Consensus 86 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 165 (257)
T 3imf_A 86 ILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLA 165 (257)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHHH
Confidence 99999999888888999999999999999999999999999999 44557999999999999999999999999999999
Q ss_pred HHHHHHHHHc-cCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWA-KDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~-~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|+++++.|++ +.||+||+|+||+++|++...
T Consensus 166 l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~ 197 (257)
T 3imf_A 166 MTKTLAVEWGRKYGIRVNAIAPGPIERTGGAD 197 (257)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-
T ss_pred HHHHHHHHhccccCeEEEEEEECCCcCCcchh
Confidence 9999999997 679999999999999997643
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-43 Score=270.50 Aligned_cols=188 Identities=28% Similarity=0.388 Sum_probs=177.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id 86 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-GGLD 86 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999999888888887767789999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+.++++|+.|++.++++++|+|.+++ |+||++||.++..+.++...|++||+++++|
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 165 (247)
T 2jah_A 87 ILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATKFGVNAF 165 (247)
T ss_dssp EEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHHHHHHHH
Confidence 999999988777888899999999999999999999999999998766 9999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.++||+||+|+||+++|++...
T Consensus 166 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 195 (247)
T 2jah_A 166 SETLRQEVTERGVRVVVIEPGTTDTELRGH 195 (247)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBSSSGGGG
T ss_pred HHHHHHHhcccCcEEEEEECCCCCCcchhc
Confidence 999999999999999999999999998754
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-43 Score=279.08 Aligned_cols=190 Identities=33% Similarity=0.455 Sum_probs=180.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 107 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF-GALN 107 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999999999888888777789999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||+....++.+.+.++|+..+++|+.|++.++++++|.|.+++.|+||++||.++..+.++...|++||+++++|
T Consensus 108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 187 (270)
T 3ftp_A 108 VLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGM 187 (270)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHHH
Confidence 99999999888888899999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+++.||+||+|+||+|+|++....
T Consensus 188 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 218 (270)
T 3ftp_A 188 TRALAREIGSRGITVNCVAPGFIDTDMTKGL 218 (270)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSHHHHHS
T ss_pred HHHHHHHHhhhCeEEEEEEeCCCcCcchhhc
Confidence 9999999999999999999999999987643
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-43 Score=276.09 Aligned_cols=189 Identities=28% Similarity=0.388 Sum_probs=178.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-------------ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-------------NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-------------~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~ 67 (202)
|++|||||++|||+++|++|+++|++|++++| +.+.++...+++...+.++.++.+|++|+++++++
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 91 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV 91 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 68999999999999999999999999999998 67778888888877788899999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCC
Q 028868 68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPS 146 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~ 146 (202)
++++.+.+ +++|+||||||+....++.+.+.++|++.+++|+.|++.++++++|+|.+++ .|+||++||.++..+.++
T Consensus 92 ~~~~~~~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 170 (277)
T 3tsc_A 92 VDDGVAAL-GRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPF 170 (277)
T ss_dssp HHHHHHHH-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSS
T ss_pred HHHHHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCC
Confidence 99999999 7999999999998878888999999999999999999999999999998765 689999999999999999
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
...|++||+++++|+++++.|++++||+||+|+||+++|++...
T Consensus 171 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 214 (277)
T 3tsc_A 171 MIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSG 214 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred chhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccc
Confidence 99999999999999999999999999999999999999999764
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-43 Score=276.35 Aligned_cols=191 Identities=32% Similarity=0.380 Sum_probs=179.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++| +.+.++...+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-g~i 107 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW-GRL 107 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999988 6777788888887778889999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|.+++.|+||++||.++..+.++...|++||+++++
T Consensus 108 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 187 (269)
T 4dmm_A 108 DVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIG 187 (269)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence 99999999988888889999999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+++++.|++++||+||+|+||+|+|++.....
T Consensus 188 l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~ 220 (269)
T 4dmm_A 188 LTKTVAKELASRGITVNAVAPGFIATDMTSELA 220 (269)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHH
T ss_pred HHHHHHHHHhhhCcEEEEEEECCCcCccccccc
Confidence 999999999999999999999999999987543
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-43 Score=277.48 Aligned_cols=190 Identities=31% Similarity=0.440 Sum_probs=180.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id 103 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-GPIG 103 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCCc
Confidence 689999999999999999999999999999999999999999988878889999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhH--HHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHP--LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+||||||.....++.+.+.++|++.+++|+.|++.++++++| .|.+++.|+||++||.++..+.++...|++||++++
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~ 183 (279)
T 3sju_A 104 ILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVV 183 (279)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHHH
Confidence 999999998888888999999999999999999999999999 577777899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+++++.|+++.||+||+|+||+|+|++....
T Consensus 184 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 216 (279)
T 3sju_A 184 GFTKSVGFELAKTGITVNAVCPGYVETPMAERV 216 (279)
T ss_dssp HHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHH
T ss_pred HHHHHHHHHHHhhCcEEEEEeeCcccchHHHHH
Confidence 999999999999999999999999999987654
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-43 Score=276.43 Aligned_cols=189 Identities=26% Similarity=0.372 Sum_probs=176.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC----------------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN----------------QIELDARLHEWKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~----------------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i 64 (202)
|++|||||++|||+++|++|+++|++|++++|+ .++++...+++...+.++.++.+|++|++++
T Consensus 12 k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 91 (286)
T 3uve_A 12 KVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDAL 91 (286)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHH
Confidence 789999999999999999999999999999887 6778888888877788899999999999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCCCCCCC-CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCcc
Q 028868 65 EKLIETVTSIFQGKLNILINNAAIAFVKP-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR 142 (202)
Q Consensus 65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~ 142 (202)
+++++++.+.+ +++|+||||||+....+ +.+.+.++|+.++++|+.|++.++++++|+|.+++ .|+||++||..+..
T Consensus 92 ~~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 170 (286)
T 3uve_A 92 KAAVDSGVEQL-GRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLK 170 (286)
T ss_dssp HHHHHHHHHHH-SCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHh-CCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhcc
Confidence 99999999999 79999999999876554 78899999999999999999999999999998764 68999999999999
Q ss_pred CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 143 ~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+.++...|++||+++++|+++++.|++++||+||+|+||+|+|+|...
T Consensus 171 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 218 (286)
T 3uve_A 171 AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHN 218 (286)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSS
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccc
Confidence 999999999999999999999999999999999999999999999864
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-43 Score=274.59 Aligned_cols=187 Identities=29% Similarity=0.389 Sum_probs=176.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++ +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id 82 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALT-GGID 82 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence 78999999999999999999999999999999998888877766 5578999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|++.+++|+.|++.++++++|+|++++ .|+||++||..+..+.++...|++||+++++
T Consensus 83 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 162 (247)
T 3rwb_A 83 ILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIG 162 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHH
Confidence 999999998888888999999999999999999999999999998765 6999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
|+++++.|++++||+||+|+||+++|++....
T Consensus 163 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 194 (247)
T 3rwb_A 163 FTRALATELGKYNITANAVTPGLIESDGVKAS 194 (247)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred HHHHHHHHhhhcCeEEEEEeeCcCcCcccccc
Confidence 99999999999999999999999999987654
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-43 Score=274.92 Aligned_cols=190 Identities=22% Similarity=0.287 Sum_probs=179.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++...+++.+.+.++.++.+|++|+++++++++++.+++ +++|
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id 90 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY-GRVD 90 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-SCCS
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCCc
Confidence 689999999999999999999999999999999999999999988888889999999999999999999999998 7999
Q ss_pred EEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.. ...++.+.+.++|++.+++|+.+++.++++++|+|.+++ |+||++||..+..+.++...|++||+++++
T Consensus 91 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 169 (264)
T 3ucx_A 91 VVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHSQAKYGAYKMAKSALLA 169 (264)
T ss_dssp EEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccCCCccHHHHHHHHHHHH
Confidence 999999985 567888999999999999999999999999999998764 999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+++++.|++++||+||+|+||+|+|++.....
T Consensus 170 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~ 202 (264)
T 3ucx_A 170 MSQTLATELGEKGIRVNSVLPGYIWGGTLKSYF 202 (264)
T ss_dssp HHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHH
T ss_pred HHHHHHHHhCccCeEEEEEecCccccccHHHHH
Confidence 999999999999999999999999999876543
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-43 Score=270.85 Aligned_cols=187 Identities=24% Similarity=0.253 Sum_probs=167.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++.. ++.++.+|++|+++++++++++.+.+ +++|
T Consensus 4 k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id 79 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWG-GLPE 79 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHH-CSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhc-CCCc
Confidence 6899999999999999999999999999999999998888877733 58999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++ ++||++||.++..+.++...|++||+++++|
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 158 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSAAQVGKANESLYCASKWGMRGF 158 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEECCSSCSSHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHHhcCCCCCCcHHHHHHHHHHHH
Confidence 999999998778888999999999999999999999999999998764 5999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++++.|+++.||+||+|+||+++|++.....
T Consensus 159 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 190 (235)
T 3l6e_A 159 LESLRAELKDSPLRLVNLYPSGIRSEFWDNTD 190 (235)
T ss_dssp HHHHHHHTTTSSEEEEEEEEEEECCCC-----
T ss_pred HHHHHHHhhccCCEEEEEeCCCccCcchhccC
Confidence 99999999999999999999999999986543
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=276.62 Aligned_cols=189 Identities=27% Similarity=0.394 Sum_probs=177.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|++|||||++|||+++|++|+++|++|++++|+ .++++...+++...+.++.++.+|++|++++++++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 108 (299)
T 3t7c_A 29 KVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAV 108 (299)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence 689999999999999999999999999999987 77788888888877888999999999999999999
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCC-CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCC
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKP-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPS 146 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~ 146 (202)
+++.+.+ +++|+||||||+....+ +.+.+.++|+..+++|+.|++.++++++|+|.+++ .|+||++||.++..+.++
T Consensus 109 ~~~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~ 187 (299)
T 3t7c_A 109 DDGVTQL-GRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAEN 187 (299)
T ss_dssp HHHHHHH-SCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTT
T ss_pred HHHHHHh-CCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCC
Confidence 9999999 79999999999876554 88899999999999999999999999999987654 789999999999999999
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
...|++||+++++|+++++.|+++.||+||+|+||+|+|++...
T Consensus 188 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 231 (299)
T 3t7c_A 188 IGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLN 231 (299)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccc
Confidence 99999999999999999999999999999999999999999864
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-43 Score=276.50 Aligned_cols=190 Identities=29% Similarity=0.394 Sum_probs=179.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++.+ .+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 99 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF-GGL 99 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH-TSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999999999999999988888865 47789999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|.+++ .|+||++||.++..+.++...|++||++++
T Consensus 100 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 179 (266)
T 4egf_A 100 DVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLV 179 (266)
T ss_dssp SEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHHH
Confidence 9999999998888888999999999999999999999999999998765 689999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+++++.|++++||+||+|+||+|+|++....
T Consensus 180 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 212 (266)
T 4egf_A 180 MATKVLARELGPHGIRANSVCPTVVLTEMGQRV 212 (266)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHH
T ss_pred HHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhh
Confidence 999999999999999999999999999987543
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-43 Score=276.01 Aligned_cols=191 Identities=29% Similarity=0.367 Sum_probs=174.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++| +.+.++...+++... +.++.++.+|++|+++++++++++.+.+ ++
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~ 104 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF-GG 104 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT-SS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC-CC
Confidence 68999999999999999999999999999999 667777777777655 5689999999999999999999999998 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|+||||||.....++.+.+.++|+.++++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||++++
T Consensus 105 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 184 (281)
T 3v2h_A 105 ADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIM 184 (281)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHHHH
Confidence 99999999998888888999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++++++.|++++||+||+|+||+++|++.....
T Consensus 185 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~ 218 (281)
T 3v2h_A 185 GLTKTVALEVAESGVTVNSICPGYVLTPLVEKQI 218 (281)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCC-------
T ss_pred HHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhc
Confidence 9999999999999999999999999999976543
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-43 Score=276.01 Aligned_cols=189 Identities=30% Similarity=0.350 Sum_probs=178.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 87 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF-GGLD 87 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999999999998887777889999999999999999999999999 7999
Q ss_pred EEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~ 158 (202)
+||||||+. ...++.+.+.++|+..+++|+.|++.++++++|+|.+++.|+||++||..+. .+.++...|++||++++
T Consensus 88 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~ 167 (280)
T 3tox_A 88 TAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLI 167 (280)
T ss_dssp EEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHHH
Confidence 999999976 4567888999999999999999999999999999998888999999999988 78889999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+|+++++.|+++.||+||+|+||+|+|++...
T Consensus 168 ~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 199 (280)
T 3tox_A 168 GLVQALAVELGARGIRVNALLPGGTDTPANFA 199 (280)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBSSTTSGG
T ss_pred HHHHHHHHHhhhcCeEEEEEEECCCCCchhhh
Confidence 99999999999999999999999999998765
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-43 Score=275.82 Aligned_cols=190 Identities=25% Similarity=0.344 Sum_probs=179.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC---eEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++.+.+. ++.++.+|++|+++++++++++.+.+ +
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 90 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH-G 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc-C
Confidence 6899999999999999999999999999999999999999988876654 89999999999999999999999999 7
Q ss_pred CccEEEEcCCC-CCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 78 KLNILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 78 ~id~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
++|++|||||. ....++.+.+.++|++.+++|+.|++.++++++|+|.+++.|+||++||.++..+.++...|++||++
T Consensus 91 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 170 (281)
T 3svt_A 91 RLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSA 170 (281)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHHH
Confidence 99999999997 45667888999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++++++.|++++||+||+|+||+++|++....
T Consensus 171 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 205 (281)
T 3svt_A 171 VDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAI 205 (281)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhc
Confidence 99999999999999999999999999999998653
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-43 Score=276.37 Aligned_cols=192 Identities=28% Similarity=0.338 Sum_probs=172.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+. .+.++.+|++|+++++++++++.+.+ +++
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 112 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-ARL 112 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999999999999999888888865543 35899999999999999999999999 799
Q ss_pred cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--CCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
|+||||||.... .++.+.+.++|+..+++|+.|++.++++++|+|.+++ .|+||++||.++..+.++...|++||++
T Consensus 113 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa 192 (281)
T 4dry_A 113 DLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHA 192 (281)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHHH
Confidence 999999998644 6788899999999999999999999999999998764 6899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+++++++++.|+++.||+||+|+||+|+|++.....+
T Consensus 193 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~ 229 (281)
T 4dry_A 193 ITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST 229 (281)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C
T ss_pred HHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc
Confidence 9999999999999999999999999999999876543
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-43 Score=273.03 Aligned_cols=190 Identities=23% Similarity=0.280 Sum_probs=170.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--C-CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--G-FKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++... + .++.++.+|++|+++++++++++.+.+ +
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 86 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY-G 86 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc-C
Confidence 68999999999999999999999999999999999999888887654 3 578899999999999999999999999 7
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
++|++|||||+....++ +.+.++|+..+++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||+++
T Consensus 87 ~iD~lvnnAg~~~~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 165 (250)
T 3nyw_A 87 AVDILVNAAAMFMDGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFAL 165 (250)
T ss_dssp CEEEEEECCCCCCCCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHH
Confidence 99999999999877677 78999999999999999999999999999988789999999999999777799999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++|+++++.|+++.||+||+|+||+++|++.....
T Consensus 166 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~ 200 (250)
T 3nyw_A 166 LGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG 200 (250)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT
T ss_pred HHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC
Confidence 99999999999999999999999999999876543
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=278.14 Aligned_cols=190 Identities=31% Similarity=0.374 Sum_probs=179.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++.+.+ .++.++.+|++|+++++++++++.+.+ +++
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 120 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF-GAL 120 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999999999999999998887765 689999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~ 158 (202)
|+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.++||++||..+. .+.++...|++||++++
T Consensus 121 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~ 200 (293)
T 3rih_A 121 DVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQL 200 (293)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHHHHH
Confidence 99999999988888899999999999999999999999999999998878999999999986 88899999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
.|+++++.|++++||+||+|+||+|+|++....
T Consensus 201 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~ 233 (293)
T 3rih_A 201 GFMRTAAIELAPRGVTVNAILPGNILTEGLVDM 233 (293)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT
T ss_pred HHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc
Confidence 999999999999999999999999999987543
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=274.19 Aligned_cols=187 Identities=28% Similarity=0.397 Sum_probs=177.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++ +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 105 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF-GGVD 105 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999998888877766 5578899999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|++.+++|+.|++.++++++|+|.+++.|+||++||..+..+.++...|++||++++.+
T Consensus 106 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l 185 (277)
T 3gvc_A 106 KLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQL 185 (277)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHH
Confidence 99999999888888899999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|++++||+||+|+||+|+|++....
T Consensus 186 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~ 216 (277)
T 3gvc_A 186 SRITAAELRSSGIRSNTLLPAFVDTPMQQTA 216 (277)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred HHHHHHHhcccCeEEEEEeeCCccCchHHHh
Confidence 9999999999999999999999999987654
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=273.54 Aligned_cols=185 Identities=33% Similarity=0.476 Sum_probs=175.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.++...+++ +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 103 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKW-GRVD 103 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999998888777664 4578999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||+....++.+.+.++|+..+++|+.|++.++++++|+|++++.|+||++||..+..+.++...|++||+++++|
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 183 (277)
T 4dqx_A 104 VLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSL 183 (277)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHH
Confidence 99999999888888899999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++.|++++||+||+|+||+++|++..
T Consensus 184 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~ 212 (277)
T 4dqx_A 184 TRAMAMDHAKEGIRVNAVAPGTIDSPYFT 212 (277)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHH
T ss_pred HHHHHHHhhhcCeEEEEEeeCcCcCchhh
Confidence 99999999999999999999999999843
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=276.54 Aligned_cols=190 Identities=26% Similarity=0.434 Sum_probs=181.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id 110 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL-GGVD 110 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC-CCCC
Confidence 689999999999999999999999999999999999999999998878889999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|.+++ .++||++||.++..+.++...|++||+++++
T Consensus 111 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 190 (301)
T 3tjr_A 111 VVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVG 190 (301)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHHH
Confidence 999999998888888999999999999999999999999999998765 7899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++.|+.+.||+|++|+||+|+|++....
T Consensus 191 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 222 (301)
T 3tjr_A 191 LAETLAREVKPNGIGVSVLCPMVVETKLVSNS 222 (301)
T ss_dssp HHHHHHHHHGGGTEEEEEECCSCCCSSHHHHH
T ss_pred HHHHHHHHhcccCcEEEEEECCcccccccccc
Confidence 99999999999999999999999999998654
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=272.06 Aligned_cols=190 Identities=31% Similarity=0.433 Sum_probs=177.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.++...+++...+.++.++.+|++|+++++++++++.+++ +++|
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~iD 111 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL-GGID 111 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 789999999999999999999999999999999999999999988878889999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCC--CCChhhhhhHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI--PSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~--~~~~~y~asK~a~ 157 (202)
+||||||.....++.+.+.++|++.+++|+.|++.++++++|+|.+++ .++||++||..+..+. ++...|++||+++
T Consensus 112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~ 191 (276)
T 3r1i_A 112 IAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAV 191 (276)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHHH
Confidence 999999998888888999999999999999999999999999998765 4899999999887654 3678999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+.++++++.|++++||+||+|+||+|+|++....
T Consensus 192 ~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~ 225 (276)
T 3r1i_A 192 VHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL 225 (276)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG
T ss_pred HHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc
Confidence 9999999999999999999999999999998754
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=268.85 Aligned_cols=192 Identities=27% Similarity=0.374 Sum_probs=174.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id 108 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH-GRCD 108 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999999999999988888899999999999999999999999998 7999
Q ss_pred EEEEcCCC-CCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||. ....++.+.+.++|+..+++|+.|++.++++++|+|.+++.|+||++||..+..+.++...|++||+++++
T Consensus 109 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 188 (262)
T 3rkr_A 109 VLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNG 188 (262)
T ss_dssp EEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHHHH
Confidence 99999998 45567888999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
++++++.|+.+.||+|++|+||+++|++......
T Consensus 189 l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~ 222 (262)
T 3rkr_A 189 LMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA 222 (262)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCC----------
T ss_pred HHHHHHHHhhhcCcEEEEEecCCCcCCccccccc
Confidence 9999999999999999999999999999865543
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=269.08 Aligned_cols=189 Identities=28% Similarity=0.348 Sum_probs=176.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecC--CCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDL--SSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv--~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++.+.+ ..+.++.+|+ +|+++++++++++.+.+ +
T Consensus 13 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~-g 91 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY-P 91 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC-S
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC-C
Confidence 689999999999999999999999999999999999988888886553 3788999999 99999999999999998 7
Q ss_pred CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 78 KLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 78 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
++|++|||||.. ...++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||..+..+.++...|++||++
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 171 (252)
T 3f1l_A 92 RLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFA 171 (252)
T ss_dssp CCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHHH
Confidence 999999999985 4568888999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++|+++++.|+++. |+||+|+||+++|++....
T Consensus 172 ~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~ 205 (252)
T 3f1l_A 172 TEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASA 205 (252)
T ss_dssp HHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHH
T ss_pred HHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhh
Confidence 999999999999876 9999999999999987543
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-42 Score=268.32 Aligned_cols=191 Identities=32% Similarity=0.399 Sum_probs=181.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++.+.+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 84 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAEN-LAID 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTT-CCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 789999999999999999999999999999999999999988888878889999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|++||++++.+
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 164 (247)
T 3lyl_A 85 ILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGF 164 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHHH
Confidence 99999999887888889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++++.|+.++||+|++|+||+++|++.....
T Consensus 165 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 196 (247)
T 3lyl_A 165 SKSLAYEVASRNITVNVVAPGFIATDMTDKLT 196 (247)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC
T ss_pred HHHHHHHHHHcCeEEEEEeeCcEecccchhcc
Confidence 99999999999999999999999999987543
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-42 Score=272.06 Aligned_cols=189 Identities=25% Similarity=0.274 Sum_probs=169.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.+++++..+++. .++.++.+|++|+++++++++++.+.+ +++|
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 104 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG---DDALCVPTDVTDPDSVRALFTATVEKF-GRVD 104 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT---SCCEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC---CCeEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999998888877763 578899999999999999999999999 7999
Q ss_pred EEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--CCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+||||||.... .++.+.+.++|++.+++|+.|++.++++++|+|++++ .|+||++||..+..+.++...|++||+++
T Consensus 105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~ 184 (272)
T 4dyv_A 105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAI 184 (272)
T ss_dssp EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHH
Confidence 99999998644 6788899999999999999999999999999998765 68999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
++|+++++.|+++.||+||+|+||+|+|++.+....
T Consensus 185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~ 220 (272)
T 4dyv_A 185 TGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKA 220 (272)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEEEECC---------
T ss_pred HHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcc
Confidence 999999999999999999999999999999876543
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=273.42 Aligned_cols=191 Identities=20% Similarity=0.259 Sum_probs=178.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-------HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-------ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-------~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++|||||++|||+++|++|+++|++|++++|+.+ .++...+++...+.++.++.+|++|+++++++++++.+
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 89 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVE 89 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999876 46677777777788999999999999999999999999
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-CCChhhhh
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGA 152 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~~~y~a 152 (202)
.+ +++|++|||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.++||++||..+..+. ++...|++
T Consensus 90 ~~-g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~a 168 (285)
T 3sc4_A 90 QF-GGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMM 168 (285)
T ss_dssp HH-SCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHHH
Confidence 99 79999999999988888999999999999999999999999999999998888999999999998886 78899999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCC-cccCCCccchh
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPW-VIKTSMIKPFE 192 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG-~v~t~~~~~~~ 192 (202)
||+++++|+++++.|++++||+||+|+|| +++|++.....
T Consensus 169 sKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~ 209 (285)
T 3sc4_A 169 AKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLL 209 (285)
T ss_dssp HHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhc
Confidence 99999999999999999999999999999 68999876554
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=269.11 Aligned_cols=187 Identities=29% Similarity=0.367 Sum_probs=175.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++...+++ +.++.++.+|++|+++++++++++.+++ +++|
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id 84 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHA-GGLD 84 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHS-SSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999998888877776 3468899999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|++.+++|+.|++.++++++|.|.+++ .|+||++||.++..+.++...|++||+++++
T Consensus 85 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 164 (259)
T 4e6p_A 85 ILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVIS 164 (259)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHH
Confidence 999999998888888999999999999999999999999999998765 7899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++.|++++||+||+|+||+++|++....
T Consensus 165 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 196 (259)
T 4e6p_A 165 LTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV 196 (259)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH
T ss_pred HHHHHHHHhhhcCCEEEEEEECCCccchhhhh
Confidence 99999999999999999999999999987654
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-43 Score=276.84 Aligned_cols=188 Identities=29% Similarity=0.399 Sum_probs=177.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||++|||+++|++|+++|+ +|++++|+.++++++.+++... +.++.++.+|++|+++++++++++.+.+
T Consensus 34 k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 113 (287)
T 3rku_A 34 KTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEF 113 (287)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGG
T ss_pred CEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 7899999999999999999999998 9999999999999988888754 5689999999999999999999999998
Q ss_pred CCCccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 76 QGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 76 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+++|+||||||... ..++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||
T Consensus 114 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asK 192 (287)
T 3rku_A 114 -KDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASK 192 (287)
T ss_dssp -CSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHHH
Confidence 79999999999875 5678889999999999999999999999999999888889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++|+++++.|++++||+||+|+||+|+|++..
T Consensus 193 aa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~ 227 (287)
T 3rku_A 193 FAVGAFTDSLRKELINTKIRVILIAPGLVETEFSL 227 (287)
T ss_dssp HHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHH
T ss_pred HHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCcccc
Confidence 99999999999999999999999999999999853
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=267.56 Aligned_cols=189 Identities=33% Similarity=0.429 Sum_probs=177.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++| ++++++...+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i 83 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF-GQV 83 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999 8888888888887667789999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||||.....++.+.+.++|+..+++|+.|++.+++.++|+|++++.++||++||.++..+.++...|++||++++.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 163 (246)
T 2uvd_A 84 DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIG 163 (246)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHH
Confidence 99999999887777888999999999999999999999999999987777999999999998888999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+.++||+||+|+||+++|++...
T Consensus 164 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 194 (246)
T 2uvd_A 164 LTKTSAKELASRNITVNAIAPGFIATDMTDV 194 (246)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBGGGCSSC
T ss_pred HHHHHHHHhhhcCeEEEEEEeccccCcchhh
Confidence 9999999999999999999999999998764
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=271.73 Aligned_cols=189 Identities=24% Similarity=0.331 Sum_probs=172.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-------HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-------LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++|||||++|||+++|++|+++|++|++++|+.++ ++...+++...+.++.++.+|++|+++++++++++.+
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 86 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVD 86 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 789999999999999999999999999999998753 6666777777788999999999999999999999999
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--CCCChhhh
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYG 151 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~y~ 151 (202)
++ +++|++|||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.++||++||..+..+ .++...|+
T Consensus 87 ~~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~ 165 (274)
T 3e03_A 87 TF-GGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYT 165 (274)
T ss_dssp HH-SCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHHH
T ss_pred Hc-CCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchHH
Confidence 99 7999999999998888888999999999999999999999999999999888899999999999888 67889999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCC-cccCCCccc
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPW-VIKTSMIKP 190 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG-~v~t~~~~~ 190 (202)
+||+++++|+++++.|++++||+||+|+|| +++|++...
T Consensus 166 asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~ 205 (274)
T 3e03_A 166 LAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM 205 (274)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----
T ss_pred HHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh
Confidence 999999999999999999999999999999 689998743
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-42 Score=268.96 Aligned_cols=190 Identities=58% Similarity=0.933 Sum_probs=174.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++...+.++.++.+|++|+++++++++++.+.+++++|
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 101 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 101 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCc
Confidence 68999999999999999999999999999999999888888888776778999999999999999999999998745899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.++||++||.++..+.++...|++||++++.+
T Consensus 102 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 181 (273)
T 1ae1_A 102 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQM 181 (273)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999877779999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|++++||+||+|+||+++|++...
T Consensus 182 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 211 (273)
T 1ae1_A 182 TKSLACEWAKDNIRVNSVAPGVILTPLVET 211 (273)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred HHHHHHHHhhcCcEEEEEEeCCCcCchhhh
Confidence 999999999999999999999999998754
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=273.75 Aligned_cols=191 Identities=26% Similarity=0.348 Sum_probs=164.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++| +++.++...+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 108 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF-GRI 108 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH-SCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999985 7778888888888778889999999999999999999999999 799
Q ss_pred cEEEEcCCC--CCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC---CCeEEEecCCCCccCCCCChhhhhhH
Q 028868 80 NILINNAAI--AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 80 d~vi~~ag~--~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
|+||||||+ ....++.+.+.++|+..+++|+.|++.++++++|+|.+++ .|+||++||.++..+.++...|++||
T Consensus 109 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK 188 (280)
T 4da9_A 109 DCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSK 188 (280)
T ss_dssp CEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHHH
T ss_pred CEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHHH
Confidence 999999998 4556788899999999999999999999999999998754 68999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++++++++++.|++++||+||+|+||+|+|++.....
T Consensus 189 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 226 (280)
T 4da9_A 189 AGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS 226 (280)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------
T ss_pred HHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc
Confidence 99999999999999999999999999999999986543
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-42 Score=272.06 Aligned_cols=187 Identities=30% Similarity=0.342 Sum_probs=165.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++ +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 103 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVAEREM-EGID 103 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHHHHHH-TSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999998887776654 5579999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|++.+++|+.|++.++++++|.|.+++.|+||++||..+..+.++...|++||++++++
T Consensus 104 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 183 (266)
T 3grp_A 104 ILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGF 183 (266)
T ss_dssp EEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHH
Confidence 99999999887888889999999999999999999999999999888789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|++++||+||+|+||+++|++....
T Consensus 184 ~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~ 214 (266)
T 3grp_A 184 SKALAQEIASRNITVNCIAPGFIKSAMTDKL 214 (266)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSHHHHTC
T ss_pred HHHHHHHhhhhCcEEEEEeeCcCCCchhhcc
Confidence 9999999999999999999999999987643
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-42 Score=269.04 Aligned_cols=184 Identities=30% Similarity=0.404 Sum_probs=173.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id 84 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTL-GAID 84 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-SSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 68999999999999999999999999999999998888877766 3478999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++.+++|+.|++.++++++|+|++ .|+||++||.++..+.++...|++||+++++|
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 162 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVADEGGHPGMSVYSASKAALVSF 162 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGGGSSBCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence 9999999988888899999999999999999999999999999976 58999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|++++||+||+|+||+++|++...
T Consensus 163 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 192 (255)
T 4eso_A 163 ASVLAAELLPRGIRVNSVSPGFIDTPTKGV 192 (255)
T ss_dssp HHHHHHHTGGGTCEEEEEEECSBCCSSTTC
T ss_pred HHHHHHHHhhhCcEEEEEecCcccCccccc
Confidence 999999999999999999999999998653
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-42 Score=267.68 Aligned_cols=189 Identities=34% Similarity=0.505 Sum_probs=176.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH-HhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW-KNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++ ...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i 100 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-GKL 100 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999998888887777 4446678999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC-CccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG-GVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~-~~~~~~~~~~y~asK~a~~ 158 (202)
|+||||||.....++.+.+.++|+.++++|+.|++.++++++|+|++++.++||++||.. +..+.++...|++||++++
T Consensus 101 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~ 180 (267)
T 1vl8_A 101 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVA 180 (267)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHHHH
Confidence 999999998877788889999999999999999999999999999887789999999998 8888899999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++++.|+++.||+||+|+||+++|++...
T Consensus 181 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 212 (267)
T 1vl8_A 181 SLTKALAKEWGRYGIRVNVIAPGWYRTKMTEA 212 (267)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBCSTTTHH
T ss_pred HHHHHHHHHhcccCeEEEEEEeccCccccccc
Confidence 99999999999999999999999999999764
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-42 Score=273.62 Aligned_cols=189 Identities=31% Similarity=0.318 Sum_probs=179.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|.++++++++++.+. +++|
T Consensus 34 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~iD 111 (275)
T 4imr_A 34 RTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--APVD 111 (275)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CCCC
Confidence 78999999999999999999999999999999999999998888887888999999999999999999999876 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.|+||++||..+..+.++...|++||+++++|
T Consensus 112 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l 191 (275)
T 4imr_A 112 ILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNL 191 (275)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHHH
Confidence 99999999888888899999999999999999999999999999888789999999999999888889999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|++++||+||+|+||+++|++....
T Consensus 192 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 222 (275)
T 4imr_A 192 IQSQARDFAGDNVLLNTLAPGLVDTDRNADR 222 (275)
T ss_dssp HHHHHHHHGGGTEEEEEEEESSBCSHHHHHH
T ss_pred HHHHHHHhcccCcEEEEEEeccccCcccccc
Confidence 9999999999999999999999999987654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-42 Score=269.44 Aligned_cols=185 Identities=27% Similarity=0.365 Sum_probs=173.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++ +.++.++.+|++|+++++++++++.+++ +++|
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id 87 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTF-GRLD 87 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999998888887766 4568889999999999999999999999 7999
Q ss_pred EEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
++|||||... ..++.+.+.++|++.+++|+.|++.++++++|+|++++.++||++||..+..+.++...|++||++++
T Consensus 88 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 167 (271)
T 3tzq_B 88 IVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIE 167 (271)
T ss_dssp EEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHH
Confidence 9999999862 44567889999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+|+++++.|++++||+||+|+||+++|++..
T Consensus 168 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~ 198 (271)
T 3tzq_B 168 TLTRYVATQYGRHGVRCNAIAPGLVRTPRLE 198 (271)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCCTTTC
T ss_pred HHHHHHHHHHhhcCEEEEEEEeCCCcCcccc
Confidence 9999999999999999999999999999876
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-42 Score=269.47 Aligned_cols=189 Identities=33% Similarity=0.439 Sum_probs=176.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++.+. +.++.++.+|++|+++++++++++.+.+ ++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 92 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF-GR 92 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 68999999999999999999999999999999998888887777654 6679999999999999999999999999 79
Q ss_pred ccEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|+||||||.... .++.+.+.++|+..+++|+.|++.+++.++|.|++++.++||++||..+..+.++...|++||+++
T Consensus 93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 172 (267)
T 1iy8_A 93 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGV 172 (267)
T ss_dssp CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHHH
Confidence 9999999998765 677889999999999999999999999999999887789999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+.++++++.|++++||+||+|+||+++|++...
T Consensus 173 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 205 (267)
T 1iy8_A 173 VGLTRNSAVEYGRYGIRINAIAPGAIWTPMVEN 205 (267)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHH
T ss_pred HHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhc
Confidence 999999999999999999999999999998654
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-42 Score=274.85 Aligned_cols=188 Identities=28% Similarity=0.429 Sum_probs=177.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|++|||||++|||+++|++|+++|++|++++|+ .+.++...+++...+.++.++.+|++|++++++++
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 126 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVV 126 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 689999999999999999999999999999876 67777878888777888999999999999999999
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCC
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSV 147 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~ 147 (202)
+++.+.+ +++|+||||||+....++.+.+.++|+..+++|+.|++.++++++|+|.+++ .|+||++||..+..+.++.
T Consensus 127 ~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~ 205 (317)
T 3oec_A 127 DEALAEF-GHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQ 205 (317)
T ss_dssp HHHHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTB
T ss_pred HHHHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCC
Confidence 9999999 7999999999998888889999999999999999999999999999998764 6899999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
..|++||++++.|+++++.|++++||+||+|+||+|+|++..
T Consensus 206 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~ 247 (317)
T 3oec_A 206 SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMAL 247 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCcccc
Confidence 999999999999999999999999999999999999999864
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-42 Score=268.17 Aligned_cols=189 Identities=30% Similarity=0.395 Sum_probs=177.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE--LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~--~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|++++ ++...+++...+.++.++.+|++|+++++++++++.+.+ ++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~ 81 (258)
T 3a28_C 3 KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-GG 81 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-TC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence 789999999999999999999999999999999887 777777777667789999999999999999999999999 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC-CeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++. ++||++||..+..+.++...|++||+++
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 161 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAV 161 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHH
Confidence 999999999887778888999999999999999999999999999987666 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+.++++++.|++++||+||+|+||+++|++...
T Consensus 162 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 194 (258)
T 3a28_C 162 RGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQ 194 (258)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHH
T ss_pred HHHHHHHHHHHHhhCeEEEEEECCccCChhhhh
Confidence 999999999999999999999999999998654
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-42 Score=267.93 Aligned_cols=190 Identities=29% Similarity=0.358 Sum_probs=172.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|++++ ++...+++... +.++.++.+|++|+++++++++++.+.+ ++
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 83 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM-GR 83 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence 689999999999999999999999999999999887 77777777654 6678999999999999999999999998 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.++||++||..+..+.++...|++||++++
T Consensus 84 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 163 (260)
T 1x1t_A 84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVV 163 (260)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHH
Confidence 99999999987777788899999999999999999999999999998877899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
.++++++.|++++||+||+|+||+++|++....
T Consensus 164 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 196 (260)
T 1x1t_A 164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQ 196 (260)
T ss_dssp HHHHHHHHHHTTTTEEEEEEEECCBCC------
T ss_pred HHHHHHHHHhccCCEEEEEEeecCccCchHHHh
Confidence 999999999999999999999999999987643
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=272.30 Aligned_cols=187 Identities=27% Similarity=0.367 Sum_probs=176.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++...+++.. .+.++.++.+|++|+++++++++++.+++ +++
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 106 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF-GRI 106 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999999999999988888887754 36789999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||.....++.+.+.++|+.++++|+.|++.++++++|.|.+++.|+||++||..+..+.++...|++||+++++
T Consensus 107 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 186 (277)
T 4fc7_A 107 DILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDA 186 (277)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHHHH
T ss_pred CEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHH
Confidence 99999999888788889999999999999999999999999999987778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
|+++++.|++++||+||+|+||+|+|++.
T Consensus 187 l~~~la~e~~~~gi~vn~v~PG~v~t~~~ 215 (277)
T 4fc7_A 187 MTRHLAVEWGPQNIRVNSLAPGPISGTEG 215 (277)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBSSSHH
T ss_pred HHHHHHHHhhhcCeEEEEEEECCEecchh
Confidence 99999999999999999999999999864
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-42 Score=270.74 Aligned_cols=184 Identities=23% Similarity=0.300 Sum_probs=171.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++... ...+.++.+|++|.++++++++++.+.+ +++|
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 89 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEKIY-GPAD 89 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHHHH-CSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHHHC-CCCC
Confidence 68999999999999999999999999999999987654432 2368899999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|++++++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||++++++
T Consensus 90 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~ 169 (266)
T 3p19_A 90 AIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAI 169 (266)
T ss_dssp EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHH
Confidence 99999999888888999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|++++||+||+|+||+|+|++....
T Consensus 170 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~ 200 (266)
T 3p19_A 170 SENVREEVAASNVRVMTIAPSAVKTELLSHT 200 (266)
T ss_dssp HHHHHHHHGGGTCEEEEEEECSBSSSGGGGC
T ss_pred HHHHHHHhcccCcEEEEEeeCccccchhhcc
Confidence 9999999999999999999999999998654
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-42 Score=267.29 Aligned_cols=189 Identities=30% Similarity=0.361 Sum_probs=177.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id 81 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD 81 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999998888888887667789999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|+..+++|+.|++.++++++|.|.+++ .++||++||..+..+.++...|++||++++.
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 161 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 161 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence 999999988777888899999999999999999999999999998766 6899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|++++||+||+|+||+++|++...
T Consensus 162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 192 (256)
T 1geg_A 162 LTQTAARDLAPLGITVNGYCPGIVKTPMWAE 192 (256)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSHHHHH
T ss_pred HHHHHHHHHHHcCeEEEEEEECCCccchhhh
Confidence 9999999999999999999999999998654
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-42 Score=268.74 Aligned_cols=189 Identities=30% Similarity=0.444 Sum_probs=177.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+.++++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 86 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-GKID 86 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999998888888887767789999999999999999999999999 7999
Q ss_pred EEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|.+++.|+||++||..+..+.++...|++||++++.
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 166 (262)
T 1zem_A 87 FLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIA 166 (262)
T ss_dssp EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHHH
Confidence 999999987 6677888999999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|++++||+||+|+||+++|++...
T Consensus 167 ~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~ 197 (262)
T 1zem_A 167 LTETAALDLAPYNIRVNAISPGYMGPGFMWE 197 (262)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSSHHHH
T ss_pred HHHHHHHHHHhhCeEEEEEecCCcCcchhhh
Confidence 9999999999999999999999999998654
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=266.44 Aligned_cols=190 Identities=59% Similarity=0.896 Sum_probs=178.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|+++++++++++.+.+++++|
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id 89 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 89 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCC
Confidence 68999999999999999999999999999999999888888888776778999999999999999999999999845899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.++||++||..+..+.++...|++||++++.+
T Consensus 90 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 169 (260)
T 2ae2_A 90 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQL 169 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHHHH
Confidence 99999998877778889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+++.||+||+|+||+++|++...
T Consensus 170 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 199 (260)
T 2ae2_A 170 TRCLAFEWAKDNIRVNGVGPGVIATSLVEM 199 (260)
T ss_dssp HHHHHHHTGGGTEEEEEEEECSBCSHHHHH
T ss_pred HHHHHHHHhhcCcEEEEEecCCCCCcchhh
Confidence 999999999999999999999999998653
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=267.37 Aligned_cols=187 Identities=28% Similarity=0.365 Sum_probs=174.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|+++++ +.+.++...+++...+.++.++.+|++|+++++++++++.+++ +++
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 97 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF-GHL 97 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 78999999999999999999999999999765 5666777888888778889999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC-CccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG-GVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~-~~~~~~~~~~y~asK~a~~ 158 (202)
|++|||||+....++.+.+.++|++.+++|+.|++.++++++|+|++ .|+||++||.. +..+.++...|++||++++
T Consensus 98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~ 175 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSKDFSVPKHSLYSGSKGAVD 175 (270)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTTTCCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhccCCCCCCchhHHHHHHHH
Confidence 99999999988888889999999999999999999999999999976 68999999988 5678889999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+|+++++.|++++||+||+|+||+++|++..+
T Consensus 176 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 207 (270)
T 3is3_A 176 SFVRIFSKDCGDKKITVNAVAPGGTVTDMFHE 207 (270)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSTTHHH
T ss_pred HHHHHHHHHhcccCeEEEEEEeCCccChhhhh
Confidence 99999999999999999999999999999764
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=269.84 Aligned_cols=187 Identities=25% Similarity=0.307 Sum_probs=170.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|+++ .|+.+.++...+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i 106 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF-GGV 106 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999987 567777888888887778889999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||+....++.+.+.++|+.++++|+.|++.++++++|+|++ .|+||++||..+..+.++...|++||+++++
T Consensus 107 D~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 184 (267)
T 3u5t_A 107 DVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQVGLLHPSYGIYAAAKAGVEA 184 (267)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChhhccCCCCchHHHHHHHHHHH
Confidence 99999999988888899999999999999999999999999999965 5899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|+++++.|+++.||+||+|+||+++|++...
T Consensus 185 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 215 (267)
T 3u5t_A 185 MTHVLSKELRGRDITVNAVAPGPTATDLFLE 215 (267)
T ss_dssp HHHHHHHHTTTSCCEEEEEEECCBC------
T ss_pred HHHHHHHHhhhhCCEEEEEEECCCcCccccc
Confidence 9999999999999999999999999998754
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-42 Score=268.24 Aligned_cols=189 Identities=24% Similarity=0.277 Sum_probs=160.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.++...+++ +.++.++.+|++|+++++++++++.+++ +++|
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id 83 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQEF-GHVH 83 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999998887776665 4468899999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCC----CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC------CCCeEEEecCCCCccCCCCChhh
Q 028868 81 ILINNAAIAFVKPT----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLY 150 (202)
Q Consensus 81 ~vi~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS~~~~~~~~~~~~y 150 (202)
++|||||.....++ .+.+.++|++.+++|+.|++.++++++|+|+++ +.|+||++||.++..+.++...|
T Consensus 84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 163 (257)
T 3tpc_A 84 GLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAY 163 (257)
T ss_dssp EEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHH
T ss_pred EEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcch
Confidence 99999998755443 267899999999999999999999999999874 57899999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
++||+++++|+++++.|++++||+||+|+||+|+|++.....+
T Consensus 164 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~ 206 (257)
T 3tpc_A 164 AASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ 206 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH
Confidence 9999999999999999999999999999999999999865443
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-42 Score=267.49 Aligned_cols=190 Identities=29% Similarity=0.372 Sum_probs=178.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++ |+.++.....+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 92 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV-GEI 92 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT-CCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc-CCC
Confidence 6899999999999999999999999999888 67777778888887778889999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||.....++.+.+.++|++.+++|+.|++.+++.++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus 93 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 172 (256)
T 3ezl_A 93 DVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHG 172 (256)
T ss_dssp EEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHHHH
Confidence 99999999988788889999999999999999999999999999998878999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
|+++++.|+.++||+|++|+||+++|++.+..
T Consensus 173 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 204 (256)
T 3ezl_A 173 FTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI 204 (256)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS
T ss_pred HHHHHHHHHHHhCCEEEEEEECcccCcccccc
Confidence 99999999999999999999999999987654
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=267.54 Aligned_cols=188 Identities=30% Similarity=0.387 Sum_probs=173.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+ +.++...+++...+.++.++.+|++|.++++++.+.+ +.+ +++|
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-~~~-g~iD 108 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL-AAT-RRVD 108 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH-HHH-SCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH-Hhc-CCCc
Confidence 689999999999999999999999999999966 5566777777777888999999999999999995555 445 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||+....++.+.+.++|+..+++|+.|++.++++++|+|.+++.|+||++||..+..+.++...|++||++++.|
T Consensus 109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l 188 (273)
T 3uf0_A 109 VLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGL 188 (273)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHH
Confidence 99999999888888999999999999999999999999999999888789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|++++||+||+|+||+|+|++....
T Consensus 189 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 219 (273)
T 3uf0_A 189 TRALASEWAGRGVGVNALAPGYVVTANTAAL 219 (273)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCSGGGHHH
T ss_pred HHHHHHHHhhcCcEEEEEEeCCCcCCchhhc
Confidence 9999999999999999999999999987654
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=272.43 Aligned_cols=190 Identities=25% Similarity=0.331 Sum_probs=173.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+||||+++|++|+++|++|++++|++++++...+++...+. ++.++.+|++|.++++++++.+.+.+ ++
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 87 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF-GP 87 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT-CC
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC-CC
Confidence 6899999999999999999999999999999999999999888876554 79999999999999999999999998 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC------CCCeEEEecCCCCccCCCCChhhhh
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGA 152 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS~~~~~~~~~~~~y~a 152 (202)
+|+||||||+....++.+.+.++|+.++++|+.|++.++++++|.|.++ +.|+||++||.++..+.++...|++
T Consensus 88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~a 167 (319)
T 3ioy_A 88 VSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNT 167 (319)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHHH
Confidence 9999999999888888999999999999999999999999999999764 5789999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
||+++++|+++++.|+.+.||+|++|+||+|+|++....
T Consensus 168 SKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 206 (319)
T 3ioy_A 168 TKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASD 206 (319)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------
T ss_pred HHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCccccc
Confidence 999999999999999999999999999999999998654
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=263.80 Aligned_cols=185 Identities=31% Similarity=0.387 Sum_probs=166.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|++ ++++. ++.+.+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 83 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRC 83 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999999999998 66655 334446678999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.++||++||..+..+.++...|++||++++.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 163 (249)
T 2ew8_A 84 DILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIG 163 (249)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHH
Confidence 99999999887777888999999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++++++.|++++||+||+|+||+++|++..
T Consensus 164 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 193 (249)
T 2ew8_A 164 FTRALASDLGKDGITVNAIAPSLVRTATTE 193 (249)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCC------
T ss_pred HHHHHHHHHHhcCcEEEEEecCcCcCccch
Confidence 999999999999999999999999999876
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-42 Score=268.01 Aligned_cols=192 Identities=30% Similarity=0.382 Sum_probs=177.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++ ++.+..+....++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i 104 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF-GKV 104 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999999998 66667777777777667789999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||+....++.+.+.++|+..+++|+.+++.+++.++|+|.+++.++||++||..+..+.++...|++||+++++
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 184 (269)
T 3gk3_A 105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHG 184 (269)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHHH
Confidence 99999999988888889999999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
|+++++.|+.++||+|++|+||+++|++.....+
T Consensus 185 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~ 218 (269)
T 3gk3_A 185 FTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ 218 (269)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCTTTTC---
T ss_pred HHHHHHHHhhhcCCEEEEEecCcccchhhhhhch
Confidence 9999999999999999999999999999876543
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=265.43 Aligned_cols=189 Identities=29% Similarity=0.367 Sum_probs=177.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++... +.++.++.+|++|+++++++++++.+.+ +++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i 86 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF-GGA 86 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH-SSC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999998888887777654 6678999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||.....++.+.+.++|+..+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||++++.
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 166 (263)
T 3ai3_A 87 DILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMM 166 (263)
T ss_dssp SEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHHH
Confidence 99999999887778888999999999999999999999999999987778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|++++||+||+|+||+++||+...
T Consensus 167 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 197 (263)
T 3ai3_A 167 FSKTLATEVIKDNIRVNCINPGLILTPDWIK 197 (263)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCCHHHHH
T ss_pred HHHHHHHHhhhcCcEEEEEecCcccCcchhh
Confidence 9999999999999999999999999998654
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-41 Score=265.10 Aligned_cols=187 Identities=33% Similarity=0.367 Sum_probs=173.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++++ .+.++...+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 110 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL-GGL 110 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999998654 567777888887778889999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-CCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-~~~~~~y~asK~a~~ 158 (202)
|+||||||+....++.+.+.++|++.+++|+.|++.++++++|+|++ .|+||++||..+... .++...|++||++++
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~ 188 (271)
T 3v2g_A 111 DILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAELVPWPGISLYSASKAALA 188 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTCCCSTTCHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhccCCCCCchHHHHHHHHHH
Confidence 99999999988888899999999999999999999999999999965 689999999877665 788999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+|+++++.|++++||+||+|+||+|+|++...
T Consensus 189 ~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~ 220 (271)
T 3v2g_A 189 GLTKGLARDLGPRGITVNIVHPGSTDTDMNPA 220 (271)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSSSSCS
T ss_pred HHHHHHHHHhhhhCeEEEEEecCCCcCCcccc
Confidence 99999999999999999999999999998754
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=267.24 Aligned_cols=185 Identities=30% Similarity=0.398 Sum_probs=170.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|++|||||++|||+++|++|+++|++|++++|+ .+.++...+++...+.++.++.+|++|++++++++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 93 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAAL 93 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 689999999999999999999999999999987 67777777777777888999999999999999999
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCC---
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI--- 144 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~--- 144 (202)
+++.+.+ +++|+||||||+....+ +.++|++.+++|+.|++.++++++|+|.+++ .|+||++||.++..+.
T Consensus 94 ~~~~~~~-g~id~lv~nAg~~~~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 168 (278)
T 3sx2_A 94 QAGLDEL-GRLDIVVANAGIAPMSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA 168 (278)
T ss_dssp HHHHHHH-CCCCEEEECCCCCCCSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS
T ss_pred HHHHHHc-CCCCEEEECCCCCCCCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC
Confidence 9999999 79999999999865433 5899999999999999999999999998764 7899999999988876
Q ss_pred -CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 145 -PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 145 -~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++...|++||+++++|+++++.|++++||+||+|+||+|+|++...
T Consensus 169 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 215 (278)
T 3sx2_A 169 DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINN 215 (278)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchh
Confidence 7788999999999999999999999999999999999999999864
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-41 Score=266.86 Aligned_cols=192 Identities=32% Similarity=0.382 Sum_probs=174.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++| +++..+...+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i 108 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD-GGL 108 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence 68999999999999999999999999999999 5555666677777778889999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||||+....++.+.+.++|++.+++|+.|++.+++.++|+|++++.++||++||..+..+.++...|++||++++.
T Consensus 109 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 188 (271)
T 4iin_A 109 SYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIA 188 (271)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHHH
Confidence 99999999988888888999999999999999999999999999998878999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
++++++.|+.++||+|++|+||+++|++.....+
T Consensus 189 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~ 222 (271)
T 4iin_A 189 MSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD 222 (271)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCCC-------
T ss_pred HHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH
Confidence 9999999999999999999999999999876543
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-41 Score=263.48 Aligned_cols=190 Identities=29% Similarity=0.370 Sum_probs=174.3
Q ss_pred CEEEEecCC-CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT-RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas-~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+ +|||+++|++|+++|++|++++|+.+++++..+++.+.+ .++.++.+|++|.++++++++++.+.+ ++
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 101 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA-GR 101 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh-CC
Confidence 689999998 599999999999999999999999999999888886553 579999999999999999999999998 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|+||||||+....++.+.+.++|++.+++|+.+++.++++++|+|.++ +.++||++||..+..+.++...|+++|+++
T Consensus 102 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~ 181 (266)
T 3o38_A 102 LDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGV 181 (266)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred CcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHHHH
Confidence 9999999999888888899999999999999999999999999999876 678999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+.|+++++.|+.++||+||+|+||+++|++....
T Consensus 182 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 215 (266)
T 3o38_A 182 MALTRCSAIEAVEFGVRINAVSPSIARHKFLEKT 215 (266)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred HHHHHHHHHHHHHcCcEEEEEeCCcccchhhhcc
Confidence 9999999999999999999999999999997654
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=261.54 Aligned_cols=190 Identities=31% Similarity=0.386 Sum_probs=175.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecC--CCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDL--SSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv--~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+ ..+.++.+|+ ++.++++++++++.+.+ +
T Consensus 15 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~-g 93 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF-G 93 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH-S
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC-C
Confidence 689999999999999999999999999999999999999988887664 4566677766 99999999999999998 7
Q ss_pred CccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 78 KLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 78 ~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
++|++|||||.. ...++.+.+.++|++.+++|+.|++.++++++|+|++++.++||++||..+..+.++...|++||++
T Consensus 94 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 173 (247)
T 3i1j_A 94 RLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFA 173 (247)
T ss_dssp CCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHHH
Confidence 999999999985 4567888999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcc-CCcEEEEeeCCcccCCCccch
Q 028868 157 MNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 157 ~~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++|+++++.|+.+ .||+||+|+||+++|+|....
T Consensus 174 ~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~ 209 (247)
T 3i1j_A 174 TEGLMQTLADELEGVTAVRANSINPGATRTGMRAQA 209 (247)
T ss_dssp HHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhc
Confidence 99999999999976 799999999999999987644
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-41 Score=262.12 Aligned_cols=189 Identities=35% Similarity=0.520 Sum_probs=176.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 15 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD 93 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH-GGVD 93 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999998888888887767789999999999999999999999998 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||... ..++.+.+.++|+..+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||++++.
T Consensus 94 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 173 (260)
T 2zat_A 94 ILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLG 173 (260)
T ss_dssp EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHHH
Confidence 9999999864 456778899999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+++.||+||+|+||+++|++...
T Consensus 174 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 204 (260)
T 2zat_A 174 LTKNLAVELAPRNIRVNCLAPGLIKTNFSQV 204 (260)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSSTTHH
T ss_pred HHHHHHHHhcccCeEEEEEEECcccCccchh
Confidence 9999999999999999999999999998753
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-41 Score=266.60 Aligned_cols=186 Identities=27% Similarity=0.317 Sum_probs=172.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|+++.++...+++... +..+..+.+|+++++++++++++ + ++
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~----~-g~ 85 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK----Y-PK 85 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH----C-CC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh----c-CC
Confidence 68999999999999999999999999999999999999888888765 45788999999999998877654 5 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++|||||.....++.+.+.++|++.+++|+.|++.++++++|+|.+++.|+||++||..+..+.++...|++||++++
T Consensus 86 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 165 (267)
T 3t4x_A 86 VDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQL 165 (267)
T ss_dssp CSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHH
Confidence 99999999998888888999999999999999999999999999999887899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++++.|++++||+||+|+||+++|++...+
T Consensus 166 ~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~ 198 (267)
T 3t4x_A 166 SLSRSLAELTTGTNVTVNTIMPGSTLTEGVETM 198 (267)
T ss_dssp HHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHH
T ss_pred HHHHHHHHHhCCCCeEEEEEeCCeecCccHHHH
Confidence 999999999999999999999999999976543
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=267.25 Aligned_cols=186 Identities=23% Similarity=0.245 Sum_probs=173.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHH-hcCCeEEEEEecCCCHH----------------
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWK-NKGFKVTGSVCDLSSRE---------------- 62 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~Dv~~~~---------------- 62 (202)
|++|||||++|||+++|++|+++|++|++++ |++++++...+++. ..+.++.++.+|+++.+
T Consensus 10 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 89 (291)
T 1e7w_A 10 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 89 (291)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchH
Confidence 6899999999999999999999999999999 99998888888876 45678999999999999
Q ss_pred -HHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCC--------------HHHHHHHHHHHhHhHHHHHHHHhHHHhcC
Q 028868 63 -QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDIT--------------AEDMSTVSSTNFESVFHLSQLAHPLFKAS 127 (202)
Q Consensus 63 -~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 127 (202)
+++++++++.+.+ +++|+||||||+....++.+.+ .++|+.++++|+.+++.+++.++|+|.++
T Consensus 90 ~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~ 168 (291)
T 1e7w_A 90 TRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 168 (291)
T ss_dssp HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 9999999999998 7999999999988777778888 99999999999999999999999999877
Q ss_pred C------CCeEEEecCCCCccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 128 G------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 128 ~------~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+ .++||++||..+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++
T Consensus 169 ~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~ 234 (291)
T 1e7w_A 169 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 234 (291)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG
T ss_pred CCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc
Confidence 6 68999999999999999999999999999999999999999999999999999999998
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-41 Score=264.20 Aligned_cols=185 Identities=24% Similarity=0.365 Sum_probs=167.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++. .++.++.+|++|+++++++++++.+.+ +++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 76 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG---DNLYIAQLDVRNRAAIEEMLASLPAEW-CNID 76 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---TTEEEEECCTTCHHHHHHHHHTSCTTT-CCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHhC-CCCC
Confidence 789999999999999999999999999999999988877776653 468899999999999999999998888 7899
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||... ..++.+.+.++|+..+++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||+++++
T Consensus 77 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 156 (248)
T 3asu_A 77 ILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQ 156 (248)
T ss_dssp EEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence 9999999863 567788899999999999999999999999999987778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCccc-CCCcc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIK-TSMIK 189 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~-t~~~~ 189 (202)
++++++.|+++.||+||+|+||+++ |++..
T Consensus 157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~ 187 (248)
T 3asu_A 157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSN 187 (248)
T ss_dssp HHHHHHHHTTTSCCEEEEEEECSBCC-----
T ss_pred HHHHHHHHhhhcCcEEEEEeccccccCcchh
Confidence 9999999999999999999999999 99864
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-41 Score=265.84 Aligned_cols=188 Identities=29% Similarity=0.426 Sum_probs=175.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+ ++.++.+|++|+++++++++++.+.+ +++|
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 107 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS-ARLD 107 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC-SCCS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999988888888776544 78899999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC----CeEEEecCCCCccCCCCCh-hhhhhHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN----GSIVFISSVGGVRGIPSVS-LYGAYKG 155 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~----~~iv~vsS~~~~~~~~~~~-~y~asK~ 155 (202)
+||||||.....++.+.+.++|+..+++|+.|++.++++++|.|++++. ++||++||.++..+.++.. .|++||+
T Consensus 108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK~ 187 (276)
T 2b4q_A 108 ILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKA 187 (276)
T ss_dssp EEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHHH
Confidence 9999999887778888999999999999999999999999999987654 8999999999998888888 9999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++++++.|+.+.||+||+|+||+++|++...
T Consensus 188 a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~ 222 (276)
T 2b4q_A 188 ALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH 222 (276)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh
Confidence 99999999999999999999999999999999764
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-41 Score=266.98 Aligned_cols=189 Identities=25% Similarity=0.404 Sum_probs=175.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC---eEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+. ++.++.+|++|+++++++++++.+.+ +
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g 105 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF-G 105 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc-C
Confidence 6899999999999999999999999999999999998888888876655 78999999999999999999999999 7
Q ss_pred CccEEEEcCCCCCCCC--CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-CCChhhhhhH
Q 028868 78 KLNILINNAAIAFVKP--TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGAYK 154 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~~~y~asK 154 (202)
++|+||||||.....+ +.+.+.++|+..+++|+.|++.++++++|.|.+++ |+||++||.++..+. ++...|++||
T Consensus 106 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~~~~~~~~Y~asK 184 (297)
T 1xhl_A 106 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACAK 184 (297)
T ss_dssp CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHHHH
T ss_pred CCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccCCCCCcchHHHHH
Confidence 9999999999876666 77889999999999999999999999999998766 999999999998888 8899999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++.++++++.|++++||+||+|+||+++|++....
T Consensus 185 aa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~ 221 (297)
T 1xhl_A 185 AALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM 221 (297)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCCcCcccccc
Confidence 9999999999999999999999999999999987543
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=264.12 Aligned_cols=188 Identities=28% Similarity=0.328 Sum_probs=169.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|+++ .++.+..+...+++.+.+.++.++.+|++|+++++++++++.+++ +++
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 87 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF-GEI 87 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH-CSE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-CCC
Confidence 689999999999999999999999999998 667777888888887778889999999999999999999999999 799
Q ss_pred cEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHH
Q 028868 80 NILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAM 157 (202)
Q Consensus 80 d~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~ 157 (202)
|++|||||.. ...++.+.+.++|+..+++|+.|++.++++++|+|++ .|+||++||..+. .+.++...|++||+++
T Consensus 88 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~ 165 (259)
T 3edm_A 88 HGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQAGRDGGGPGALAYATSKGAV 165 (259)
T ss_dssp EEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHCCSTTCHHHHHHHHHH
T ss_pred CEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHHhccCCCCCcHHHHHHHHHH
Confidence 9999999987 6678889999999999999999999999999999976 5899999999988 7888999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++++++++.|+++. |+||+|+||+++|++.....
T Consensus 166 ~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~ 199 (259)
T 3edm_A 166 MTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFT 199 (259)
T ss_dssp HHHHHHHHHHHTTT-CEEEEEEECCBCC-------
T ss_pred HHHHHHHHHHHCCC-CEEEEEEECCCcCccccccc
Confidence 99999999999876 99999999999999987553
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-41 Score=265.01 Aligned_cols=189 Identities=28% Similarity=0.416 Sum_probs=175.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC---eEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~---~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+. ++.++.+|++|+++++++++++.+.+ +
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 85 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF-G 85 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc-C
Confidence 6899999999999999999999999999999999988888888776555 78999999999999999999999998 7
Q ss_pred CccEEEEcCCCCCCCC----CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-CCChhhhh
Q 028868 78 KLNILINNAAIAFVKP----TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-PSVSLYGA 152 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-~~~~~y~a 152 (202)
++|+||||||.....+ +.+.+.++|+..+++|+.+++.++++++|.|.+++ ++||++||..+..+. ++...|++
T Consensus 86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~a 164 (280)
T 1xkq_A 86 KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAI 164 (280)
T ss_dssp CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHHHH
T ss_pred CCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccccCCCCCcccHHHH
Confidence 9999999999876655 67889999999999999999999999999998765 999999999998887 88999999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
||++++.++++++.|+.+.||+||+|+||+++|++....
T Consensus 165 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 203 (280)
T 1xkq_A 165 AKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM 203 (280)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT
T ss_pred HHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCccccc
Confidence 999999999999999999999999999999999986543
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=263.66 Aligned_cols=186 Identities=31% Similarity=0.361 Sum_probs=173.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++ +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD 81 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD 81 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999988877766554 4468899999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.|++.+++.++|.|++++.++||++||..+..+.++...|++||++++.+
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 161 (254)
T 1hdc_A 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL 161 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHH
Confidence 99999998877778889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.++||+||+|+||+++|++...
T Consensus 162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (254)
T 1hdc_A 162 SKLAAVELGTDRIRVNSVHPGMTYTPMTAE 191 (254)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHhhhcCeEEEEEecccCcCccccc
Confidence 999999999999999999999999998654
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-41 Score=261.53 Aligned_cols=187 Identities=29% Similarity=0.333 Sum_probs=156.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 88 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-GGID 88 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999999999999998888899999999999999999999999999 7999
Q ss_pred EEEEcCCCC---CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 81 ILINNAAIA---FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+||||||+. ...++.+.+.++|++.+++|+.|++.+++.++|.|.+++.++||++||..+. ++...|++||+++
T Consensus 89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~asK~a~ 165 (253)
T 3qiv_A 89 YLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGI 165 (253)
T ss_dssp EEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHHHH
T ss_pred EEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHHHHHH
Confidence 999999983 4456778899999999999999999999999999998888999999998876 4567899999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++++.|+.++||+|++|+||+++|++....
T Consensus 166 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 199 (253)
T 3qiv_A 166 NGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT 199 (253)
T ss_dssp HHHHHHHHHHTTTTTEEEEEEEC-----------
T ss_pred HHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc
Confidence 9999999999999999999999999999987654
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-41 Score=260.42 Aligned_cols=185 Identities=27% Similarity=0.374 Sum_probs=170.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++| ++|++++|++++++.+.+++ +.++.++.+|++|+++++++++++.+.+ ++
T Consensus 3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~ 78 (254)
T 3kzv_A 3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGH-GK 78 (254)
T ss_dssp CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence 789999999999999999999985 69999999998888777665 4578999999999999999999999999 79
Q ss_pred ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|+||||||... ..++.+.+.++|+..+++|+.|++.++++++|+|++++ |+||++||..+..+.++...|++||+++
T Consensus 79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~ 157 (254)
T 3kzv_A 79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMYFSSWGAYGSSKAAL 157 (254)
T ss_dssp CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCSSCCSHHHHHHHHHH
T ss_pred ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccCCCCcchHHHHHHHH
Confidence 999999999853 47888999999999999999999999999999998765 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++|+++++.|+ +||+||+|+||+++|++.....
T Consensus 158 ~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~ 190 (254)
T 3kzv_A 158 NHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIR 190 (254)
T ss_dssp HHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCC
T ss_pred HHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhh
Confidence 99999999998 5899999999999999987643
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=266.28 Aligned_cols=188 Identities=27% Similarity=0.389 Sum_probs=170.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++... .++.++.+|++|+++++++++++.+.+ +++|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 99 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF-ATLR 99 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG-SSCC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 68999999999999999999999999999999998888887777543 568899999999999999999998888 7999
Q ss_pred EEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCC-eEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+||||||.... .++.+.+.++|+.++++|+.|++.+++.++|.|.+++.| +||++||..+..+.++...|+++|++++
T Consensus 100 ~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~ 179 (272)
T 2nwq_A 100 GLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVE 179 (272)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHH
Confidence 99999998753 678889999999999999999999999999999877778 9999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++++.|+++.||+||+|+||+++|++...
T Consensus 180 ~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~ 211 (272)
T 2nwq_A 180 QFSLNLRCDLQGTGVRVTNLEPGLCESEFSLV 211 (272)
T ss_dssp HHHHHHHTTCTTSCCEEEEEEECSBC------
T ss_pred HHHHHHHHHhCccCeEEEEEEcCCCcCcchhc
Confidence 99999999999999999999999999998653
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-41 Score=261.67 Aligned_cols=188 Identities=28% Similarity=0.411 Sum_probs=165.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 10 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 85 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKF-GKVD 85 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence 68999999999999999999999999999999999888877765 4578999999999999999999999998 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC----CCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG----NGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~----~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+..+.++...|++||+
T Consensus 86 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKa 165 (261)
T 3n74_A 86 ILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKG 165 (261)
T ss_dssp EEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHH
T ss_pred EEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHH
Confidence 9999999875 56677789999999999999999999999999998653 678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++++|+++++.|+++.||+|++|+||+++|++.....
T Consensus 166 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 202 (261)
T 3n74_A 166 WVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFM 202 (261)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEC-----------
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhc
Confidence 9999999999999999999999999999999987543
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-42 Score=269.62 Aligned_cols=187 Identities=22% Similarity=0.290 Sum_probs=169.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC---hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN---QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++...+.++.++.+|++|+++++++++++.+.+ +
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g 90 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF-G 90 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH-C
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence 689999999999999999999999999998764 456777788887778899999999999999999999999999 7
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
++|+||||||+....++.+.+.++|+..+++|+.|++.++++++|+|++ .|+||++||..+..+.++...|++||+++
T Consensus 91 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 168 (262)
T 3ksu_A 91 KVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP--NGHIITIATSLLAAYTGFYSTYAGNKAPV 168 (262)
T ss_dssp SEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEEEEEECCCHHHHHHCCCCC-----CHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCEEEEEechhhccCCCCCchhHHHHHHH
Confidence 9999999999988888889999999999999999999999999999943 68999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++|+++++.|++++||+||+|+||+|+|++...
T Consensus 169 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 201 (262)
T 3ksu_A 169 EHYTRAASKELMKQQISVNAIAPGPMDTSFFYG 201 (262)
T ss_dssp HHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHT
T ss_pred HHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc
Confidence 999999999999999999999999999998754
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-41 Score=259.19 Aligned_cols=183 Identities=27% Similarity=0.327 Sum_probs=169.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++ + +.++.+|++|+++++++++++.+.+ +++|
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~-g~id 79 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHL-GRLD 79 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999988776665443 2 7788999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|++.+++|+.|++.++++++|+|++++.++||++||.. ..+.++...|++||+++..+
T Consensus 80 ~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~ 158 (245)
T 1uls_A 80 GVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGL 158 (245)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHH
Confidence 99999998877778889999999999999999999999999999887789999999998 88888999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.++||+||+|+||+++|++...
T Consensus 159 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 188 (245)
T 1uls_A 159 TRTLALELGRWGIRVNTLAPGFIETRMTAK 188 (245)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCTTTSS
T ss_pred HHHHHHHHhHhCeEEEEEEeCcCcCcchhh
Confidence 999999999999999999999999998764
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-41 Score=265.50 Aligned_cols=189 Identities=32% Similarity=0.475 Sum_probs=177.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++.+.+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 101 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPVD 101 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999998888888887767789999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHH--HhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL--FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+||||||.....++.+.+.++|+..+++|+.|++.++++++|. |.+++.++||++||..+..+.++...|++||++++
T Consensus 102 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 181 (277)
T 2rhc_B 102 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV 181 (277)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHHHH
Confidence 9999999887777888999999999999999999999999999 88766799999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++++.|+.+.||+||+|+||+++|++...
T Consensus 182 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 213 (277)
T 2rhc_B 182 GFTKALGLELARTGITVNAVCPGFVETPMAAS 213 (277)
T ss_dssp HHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH
T ss_pred HHHHHHHHHHHHhCcEEEEEecCcCcCchhhh
Confidence 99999999999999999999999999998654
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-41 Score=257.47 Aligned_cols=189 Identities=24% Similarity=0.294 Sum_probs=173.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++...+++. ..+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 3 k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i 81 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-GDV 81 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-SSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-CCC
Confidence 789999999999999999999999999999999999998888876 447789999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||||.....++.+.+.++|+..+++|+.|++.++++++|+|++ +.+++|+++|..+..+.++...|+++|+++++
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~ 160 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKR-TGGLALVTTSDVSARLIPYGGGYVSTKWAARA 160 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HTCEEEEECCGGGSSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCcEEEEecchhcccCCCcchHHHHHHHHHH
Confidence 99999999988888899999999999999999999999999999954 46899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
++++++.+ .+||+||+|+||+++|++......
T Consensus 161 ~~~~l~~~--~~~i~v~~v~PG~v~T~~~~~~~~ 192 (235)
T 3l77_A 161 LVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPG 192 (235)
T ss_dssp HHHHHHHH--CTTSEEEEEEECSBSSSTTTCCSC
T ss_pred HHHHHhhc--CCCeEEEEEeCCccccccccccCC
Confidence 99999444 679999999999999999876543
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-41 Score=261.81 Aligned_cols=187 Identities=25% Similarity=0.294 Sum_probs=174.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++... +.++.++.+|++|+++++++++++.+.+ +
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g- 85 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG-G- 85 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT-C-
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc-C-
Confidence 68999999999999999999999999999999998888887777643 3378899999999999999999999998 5
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|+||||||.....++.+.+.++|+..+++|+.|++.+++.++|+|.+++.++||++||..+..+.++...|++||++++
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 165 (260)
T 2z1n_A 86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVI 165 (260)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence 99999999988777788899999999999999999999999999998877899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.+++.++.|++++||+||+|+||+++|++..
T Consensus 166 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 196 (260)
T 2z1n_A 166 GVVRTLALELAPHGVTVNAVLPSLILTDRVR 196 (260)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECHHHHCCCC
T ss_pred HHHHHHHHHHhhhCeEEEEEEECCcccchhh
Confidence 9999999999999999999999999999876
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-41 Score=260.99 Aligned_cols=187 Identities=34% Similarity=0.418 Sum_probs=173.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+++ +...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id 81 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-GGVD 81 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-SSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999876 44556665556678999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.|++.+++.++|.|++++.++||++||.++..+.++...|+++|++++.+
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 161 (255)
T 2q2v_A 82 ILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGL 161 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHH
Confidence 99999998877778889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+.||+||+|+||+++|++...
T Consensus 162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (255)
T 2q2v_A 162 TKVVGLETATSNVTCNAICPGWVLTPLVQK 191 (255)
T ss_dssp HHHHHHHTTTSSEEEEEEEESSBCCHHHHH
T ss_pred HHHHHHHhcccCcEEEEEeeCCCcCcchhh
Confidence 999999999999999999999999998654
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=270.11 Aligned_cols=189 Identities=23% Similarity=0.302 Sum_probs=176.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-------HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-------LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-------~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++|||||++|||+++|++|+++|++|++++|+.++ +....+++...+.++.++.+|++|+++++++++++.+
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~ 125 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIK 125 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 689999999999999999999999999999998764 5667777777788999999999999999999999999
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--CCCChhhh
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYG 151 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~y~ 151 (202)
.+ +++|+||||||+....++.+.+.++|+.++++|+.|++.++++++|+|++++.++||++||..+..+ .++...|+
T Consensus 126 ~~-g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y~ 204 (346)
T 3kvo_A 126 KF-GGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYT 204 (346)
T ss_dssp HH-SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHHH
T ss_pred Hc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHHH
Confidence 99 7999999999998888889999999999999999999999999999999888899999999999887 78899999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCc-ccCCCccch
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWV-IKTSMIKPF 191 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~-v~t~~~~~~ 191 (202)
+||+++++++++++.|++ .||+||+|+||+ ++|++.+..
T Consensus 205 aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~ 244 (346)
T 3kvo_A 205 IAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDML 244 (346)
T ss_dssp HHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhh
Confidence 999999999999999999 899999999995 999876543
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=262.27 Aligned_cols=188 Identities=29% Similarity=0.439 Sum_probs=164.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH---HhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW---KNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~---~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++ ...+.++.++.+|++|+++++++++++.+.+ +
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g 85 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF-G 85 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc-C
Confidence 68999999999999999999999999999999999888887777 3334578999999999999999999999999 7
Q ss_pred CccEEEEcCCCCCCCCCCCC----CHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC-ccCCCCChhhhh
Q 028868 78 KLNILINNAAIAFVKPTVDI----TAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSLYGA 152 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~-~~~~~~~~~y~a 152 (202)
++|+||||||.....++.+. +.++|+..+++|+.|++.++++++|.|++++ ++||++||..+ ..+.++...|++
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~Y~~ 164 (278)
T 1spx_A 86 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSI 164 (278)
T ss_dssp CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHH
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccCCCCccHHHH
Confidence 99999999998766677777 9999999999999999999999999998765 99999999998 888899999999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
||++++.++++++.|+.+.||++|+|+||+++|++...
T Consensus 165 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 202 (278)
T 1spx_A 165 AKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA 202 (278)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC---
T ss_pred HHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccc
Confidence 99999999999999999999999999999999998754
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=259.17 Aligned_cols=185 Identities=30% Similarity=0.371 Sum_probs=172.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++.. .+.++.+|++|+++++++++++.+.+ +++|
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD 83 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTAF-GGLH 83 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999999999999888777666543 48889999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|++.+++|+.|++.+++.++|.|++++.++||++||..+..+.++...|++||++++.+
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 163 (260)
T 1nff_A 84 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL 163 (260)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.++.|+.++||++|+|+||+++|++..
T Consensus 164 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~ 192 (260)
T 1nff_A 164 TKSTALELGPSGIRVNSIHPGLVKTPMTD 192 (260)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCSGGGT
T ss_pred HHHHHHHhCccCcEEEEEEeCCCCCCccc
Confidence 99999999999999999999999999864
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=266.96 Aligned_cols=187 Identities=23% Similarity=0.313 Sum_probs=167.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC-----hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-----QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-----~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||++|||+++|++|+++|++|++++|+ .++++.+.+.+...+.++.++.+|++|+++++++++++.+.+
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 85 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED 85 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 689999999999999999999999999988775 456666666666667789999999999999999999999999
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-CCCCChhhhhhH
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYK 154 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~y~asK 154 (202)
+++|+||||||+....++.+.+.++|+..+++|+.|++.++++++|+|++++.|+||++||.++.. +.++.+.|++||
T Consensus 86 -g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK 164 (324)
T 3u9l_A 86 -GRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAK 164 (324)
T ss_dssp -SCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHHH
T ss_pred -CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHHH
Confidence 799999999999888888999999999999999999999999999999988889999999999884 456788999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+++++++++++.|+++.||+|++|+||+++|++.
T Consensus 165 aa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~ 198 (324)
T 3u9l_A 165 AAMDAIAVQYARELSRWGIETSIIVPGAFTSGTN 198 (324)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECCC-----
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEECCccccCch
Confidence 9999999999999999999999999999998764
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=262.59 Aligned_cols=187 Identities=26% Similarity=0.339 Sum_probs=175.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++...+++ +.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id 81 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY---PDRAEAISLDVTDGERIDVVAADVLARY-GRVD 81 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC---TTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCceEEEeeCCCHHHHHHHHHHHHHhC-CCCC
Confidence 68999999999999999999999999999999998877766543 4578999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|++.+++|+.|++.+++.++|+|++++.++||++||..+..+.++...|++||++++.+
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 161 (281)
T 3m1a_A 82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQL 161 (281)
T ss_dssp EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHH
Confidence 99999999877788899999999999999999999999999999988789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+++.||++++|+||+++|++..+.
T Consensus 162 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 192 (281)
T 3m1a_A 162 SEGLADEVAPFGIKVLIVEPGAFRTNLFGKG 192 (281)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCCTTTCCC
T ss_pred HHHHHHHhhccCcEEEEEecCcccccccccc
Confidence 9999999999999999999999999997643
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=262.58 Aligned_cols=186 Identities=27% Similarity=0.265 Sum_probs=169.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHH-hcCCeEEEEEecCCC----HHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWK-NKGFKVTGSVCDLSS----REQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~-~~~~~v~~~~~Dv~~----~~~i~~~~~~~~~~ 74 (202)
|++|||||++|||+++|++|+++|++|++++|++ ++++.+.+++. ..+.++.++.+|++| .++++++++++.+.
T Consensus 24 k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~ 103 (288)
T 2x9g_A 24 PAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRA 103 (288)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999999998 88888888776 456789999999999 99999999999999
Q ss_pred hCCCccEEEEcCCCCCCCCC-----CC-----CCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC------CCeEEEecCC
Q 028868 75 FQGKLNILINNAAIAFVKPT-----VD-----ITAEDMSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSV 138 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~vsS~ 138 (202)
+ +++|+||||||+....++ .+ .+.++|+..+++|+.+++.+++.++|+|.+++ .++||++||.
T Consensus 104 ~-g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~ 182 (288)
T 2x9g_A 104 F-GRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDA 182 (288)
T ss_dssp H-SCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCT
T ss_pred c-CCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecc
Confidence 8 799999999998766666 56 78899999999999999999999999998765 6899999999
Q ss_pred CCccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 139 GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 139 ~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+..+.++...|++||+++++|+++++.|++++||+||+|+||+++|++
T Consensus 183 ~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~ 231 (288)
T 2x9g_A 183 MVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV 231 (288)
T ss_dssp TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT
T ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc
Confidence 9999999999999999999999999999999999999999999999998
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=264.32 Aligned_cols=185 Identities=30% Similarity=0.309 Sum_probs=170.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC--hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN--QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~--~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|+ .+..+...+++...+.++.++.+|++|+++++++++++.+.+ ++
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~ 128 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL-GG 128 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH-TC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc-CC
Confidence 689999999999999999999999999999987 345566666666667889999999999999999999999999 79
Q ss_pred ccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
+|++|||||... ..++.+.+.++|+..+++|+.|++.++++++|+|++ .|+||++||..+..+.++...|++||+++
T Consensus 129 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaa~ 206 (294)
T 3r3s_A 129 LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQAYQPSPHLLDYAATKAAI 206 (294)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChhhccCCCCchHHHHHHHHH
Confidence 999999999864 467788999999999999999999999999999965 58999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
++|+++++.|++++||+||+|+||+|+|++.
T Consensus 207 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~ 237 (294)
T 3r3s_A 207 LNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ 237 (294)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSHHH
T ss_pred HHHHHHHHHHHhhcCeEEEEEecCcCccccc
Confidence 9999999999999999999999999999984
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=259.30 Aligned_cols=185 Identities=32% Similarity=0.341 Sum_probs=173.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++ +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id 82 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN 82 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999998887777665 4568899999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.+++.+++.++|.|++++ ++||++||..+..+.++...|++||++++.+
T Consensus 83 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 161 (253)
T 1hxh_A 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSAL 161 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCCCCCccHHHHHHHHHHH
Confidence 999999988777888899999999999999999999999999998876 9999999999999999999999999999999
Q ss_pred HHHHHHHHccC--CcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKD--NIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~--gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+. ||++++|+||+++|++...
T Consensus 162 ~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~ 193 (253)
T 1hxh_A 162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQA 193 (253)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEESEECCHHHHH
T ss_pred HHHHHHHhhhcCCCeEEEEEEeCCccCchhhh
Confidence 99999999887 9999999999999998654
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=257.79 Aligned_cols=183 Identities=32% Similarity=0.443 Sum_probs=169.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++ +...+++. . .++.+|++|+++++++++++.+.+ +++|
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~-g~iD 79 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL-GRVD 79 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999877 65555553 3 788999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|++.+++|+.|++.++++++|+|++++.++||++||..+..+.++...|++||++++.+
T Consensus 80 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 159 (256)
T 2d1y_A 80 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNL 159 (256)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999987789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+++.||+||+|+||+++|++...
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 189 (256)
T 2d1y_A 160 TRSLALDLAPLRIRVNAVAPGAIATEAVLE 189 (256)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHHhhcCeEEEEEeeCCccCchhhh
Confidence 999999999999999999999999998654
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=263.32 Aligned_cols=187 Identities=19% Similarity=0.249 Sum_probs=169.6
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+| |||+++|++|+++|++|++++|+++..+...+.....+ .+.++.+|++|+++++++++++.+.+ ++
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~ 108 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVLAEEW-GS 108 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence 6899999997 99999999999999999999999765554444433333 46889999999999999999999999 79
Q ss_pred ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|+||||||+... .++.+.+.++|+..+++|+.+++.++++++|+|++ .|+||++||..+..+.++...|++||
T Consensus 109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~~~~~~~~~~~Y~asK 186 (296)
T 3k31_A 109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYGAEKVVPHYNVMGVCK 186 (296)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTTHHHHHH
T ss_pred CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehhhccCCCCchhhHHHH
Confidence 9999999998754 67788999999999999999999999999999976 68999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++|+++++.|++++||+||+|+||+|+|++....
T Consensus 187 aal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~ 223 (296)
T 3k31_A 187 AALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI 223 (296)
T ss_dssp HHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc
Confidence 9999999999999999999999999999999997654
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-40 Score=262.49 Aligned_cols=187 Identities=20% Similarity=0.273 Sum_probs=164.0
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+| |||+++|++|+++|++|++++|+++..+ ..+++.....++.++.+|++|+++++++++++.+.+ ++
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~ 109 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKK-RVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW-GK 109 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHH-HHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT-SC
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc-CC
Confidence 6899999994 5999999999999999999999965433 333333333468899999999999999999999998 79
Q ss_pred ccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|+||||||+.. ..++.+.+.++|+..+++|+.+++.++++++|+|++ .|+||++||..+..+.++...|++||
T Consensus 110 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asK 187 (293)
T 3grk_A 110 LDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYGAEKVMPNYNVMGVAK 187 (293)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred CCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehhhccCCCchHHHHHHH
Confidence 999999999875 567888999999999999999999999999999975 68999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++|+++++.|++++||+||+|+||+|+|++....
T Consensus 188 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 224 (293)
T 3grk_A 188 AALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI 224 (293)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------
T ss_pred HHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc
Confidence 9999999999999999999999999999999987654
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=259.00 Aligned_cols=181 Identities=20% Similarity=0.248 Sum_probs=162.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++.+...+. + +.++.+|++|+++++++++++.+.+ +++|
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 101 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---G--AVALYGDFSCETGIMAFIDLLKTQT-SSLR 101 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---T--CEEEECCTTSHHHHHHHHHHHHHHC-SCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---C--CeEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 67999999999999999999999999999999987765444432 2 7789999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....+ .+.+.++|+..+++|+.|++.++++++|+|++++.|+||++||..+..+.++...|++||+++++|
T Consensus 102 ~lv~nAg~~~~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 180 (260)
T 3gem_A 102 AVVHNASEWLAET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESL 180 (260)
T ss_dssp EEEECCCCCCCCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHH
T ss_pred EEEECCCccCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHH
Confidence 9999999875554 567889999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++++.|+++ +|+||+|+||+++|++..
T Consensus 181 ~~~la~e~~~-~Irvn~v~PG~v~t~~~~ 208 (260)
T 3gem_A 181 TLSFAARFAP-LVKVNGIAPALLMFQPKD 208 (260)
T ss_dssp HHHHHHHHTT-TCEEEEEEECTTCC----
T ss_pred HHHHHHHHCC-CCEEEEEeecccccCCCC
Confidence 9999999987 799999999999998754
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=263.68 Aligned_cols=187 Identities=28% Similarity=0.360 Sum_probs=170.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|+++++++++++.+++ +++
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 126 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL-GSL 126 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH-SSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999999998765 444455555667789999999999999999999999999 799
Q ss_pred cEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++|||||... ..++.+.+.++|++.+++|+.|++.++++++|+|++ .++||++||..+..+.++...|++||++++
T Consensus 127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 204 (291)
T 3ijr_A 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIVAYEGNETLIDYSATKGAIV 204 (291)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechHhcCCCCCChhHHHHHHHHH
Confidence 99999999864 456788899999999999999999999999999964 579999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+|+++++.|++++||+||+|+||+|+|++...
T Consensus 205 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 236 (291)
T 3ijr_A 205 AFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPS 236 (291)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSTHHHH
T ss_pred HHHHHHHHHHhhcCEEEEEEeeCCCcCCcccc
Confidence 99999999999999999999999999998643
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-40 Score=265.37 Aligned_cols=186 Identities=23% Similarity=0.245 Sum_probs=173.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHH-hcCCeEEEEEecCCCHH----------------
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWK-NKGFKVTGSVCDLSSRE---------------- 62 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~-~~~~~v~~~~~Dv~~~~---------------- 62 (202)
|++|||||++|||+++|++|+++|++|++++ |++++++.+.+++. ..+.++.++.+|++|.+
T Consensus 47 k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~ 126 (328)
T 2qhx_A 47 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 126 (328)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccH
Confidence 6899999999999999999999999999999 99998888888876 44667999999999999
Q ss_pred -HHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCC--------------HHHHHHHHHHHhHhHHHHHHHHhHHHhcC
Q 028868 63 -QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDIT--------------AEDMSTVSSTNFESVFHLSQLAHPLFKAS 127 (202)
Q Consensus 63 -~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 127 (202)
+++++++++.+.+ +++|+||||||+....++.+.+ .++|+..+++|+.+++.++++++|+|.++
T Consensus 127 ~~v~~~~~~~~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 205 (328)
T 2qhx_A 127 TRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 205 (328)
T ss_dssp HHHHHHHHHHHHHH-SCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhc-CCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999998 7999999999988777777788 99999999999999999999999999877
Q ss_pred C------CCeEEEecCCCCccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 128 G------NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 128 ~------~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+ .++||++||..+..+.++...|++||++++.|++.++.|+++.||+||+|+||+|+|++
T Consensus 206 ~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~ 271 (328)
T 2qhx_A 206 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD 271 (328)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC
T ss_pred CCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc
Confidence 6 78999999999999999999999999999999999999999999999999999999998
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=253.50 Aligned_cols=190 Identities=26% Similarity=0.371 Sum_probs=178.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++|||||++|||++++++|+++|+ +|++++|++++++...+++...+.++.++.+|++|.++++++++++.+
T Consensus 3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (244)
T 2bd0_A 3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 82 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence 6899999999999999999999999 999999999888888888876677899999999999999999999999
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
.+ +++|+||||||.....++.+.+.++|+..+++|+.+++.+++.++|+|++++.++||++||..+..+.++...|++|
T Consensus 83 ~~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s 161 (244)
T 2bd0_A 83 RY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS 161 (244)
T ss_dssp HT-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred hC-CCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHH
Confidence 98 79999999999887777888899999999999999999999999999987778999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
|++++.+++.++.|+.++||++++|+||+++|++....
T Consensus 162 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 199 (244)
T 2bd0_A 162 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV 199 (244)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC
T ss_pred HHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc
Confidence 99999999999999999999999999999999997653
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-41 Score=262.36 Aligned_cols=179 Identities=30% Similarity=0.417 Sum_probs=165.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.. ...+..+.+|++|+++++++++++.+.+ +++|
T Consensus 15 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 83 (269)
T 3vtz_A 15 KVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTTKKY-GRID 83 (269)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 7899999999999999999999999999999987543 1246778999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||+....++.+.+.++|++.+++|+.|++.++++++|+|.+++.|+||++||..+..+.++...|++||+++++|
T Consensus 84 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 163 (269)
T 3vtz_A 84 ILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGL 163 (269)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHH
Confidence 99999999888888899999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+++ ||+||+|+||+|+|++....
T Consensus 164 ~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~ 193 (269)
T 3vtz_A 164 TRSVAIDYAP-KIRCNAVCPGTIMTPMVIKA 193 (269)
T ss_dssp HHHHHHHHTT-TEEEEEEEECSBCCHHHHHH
T ss_pred HHHHHHHhcC-CCEEEEEEECCCcCcchhhh
Confidence 9999999987 89999999999999987543
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-40 Score=257.38 Aligned_cols=188 Identities=27% Similarity=0.367 Sum_probs=170.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH-hCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI-FQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~-~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++...+.++.++.+|++|+++++++++++.+. + +++
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~-g~i 84 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ-GRL 84 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT-TCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC-CCc
Confidence 68999999999999999999999999999999999888888888766778999999999999999999999886 7 799
Q ss_pred cEEEEcCC--CC-----CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhh
Q 028868 80 NILINNAA--IA-----FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGA 152 (202)
Q Consensus 80 d~vi~~ag--~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~a 152 (202)
|+|||||| .. ...++.+.+.++|+.++++|+.+++.+++.++|+|.+++.|+||++||..+..+. +...|++
T Consensus 85 d~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y~a 163 (260)
T 2qq5_A 85 DVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPYGV 163 (260)
T ss_dssp CEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHHHH
T ss_pred eEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCchHH
Confidence 99999995 32 2456778889999999999999999999999999988778999999999887754 4688999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
||+++++++++++.|+++.||+||+|+||+++|+|...
T Consensus 164 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 201 (260)
T 2qq5_A 164 GKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKE 201 (260)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--
T ss_pred HHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHH
Confidence 99999999999999999999999999999999999764
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-41 Score=268.53 Aligned_cols=190 Identities=25% Similarity=0.322 Sum_probs=177.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC----------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN----------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~----------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
|++|||||++|||+++|++|+++|++|++++|+ .+.++...+++...+.++.++.+|++|++++++++++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 107 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQT 107 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 689999999999999999999999999999988 7788888888888788999999999999999999999
Q ss_pred HHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC------CCeEEEecCCCCccCC
Q 028868 71 VTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG------NGSIVFISSVGGVRGI 144 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~------~~~iv~vsS~~~~~~~ 144 (202)
+.+.+ +++|+||||||+....++.+.+.++|+..+++|+.|++.++++++|+|.+.+ .|+||++||..+..+.
T Consensus 108 ~~~~~-g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~ 186 (322)
T 3qlj_A 108 AVETF-GGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGS 186 (322)
T ss_dssp HHHHH-SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCB
T ss_pred HHHHc-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCC
Confidence 99999 7999999999998888888999999999999999999999999999997532 3799999999999999
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++...|++||+++++|+++++.|+++.||+||+|+|| ++|++.....
T Consensus 187 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~ 233 (322)
T 3qlj_A 187 VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVF 233 (322)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhh
Confidence 9999999999999999999999999999999999999 9999876543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-40 Score=258.39 Aligned_cols=190 Identities=30% Similarity=0.334 Sum_probs=176.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++ ..|+.+.++...+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i 105 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH-GAW 105 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-CCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCc
Confidence 68999999999999999999999999966 5678888888888888878889999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHh-cCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++|||||.....++.+.+.++|+..+++|+.|++.+++.+++.|. +++.++||++||..+..+.++...|++||++++
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 185 (267)
T 4iiu_A 106 YGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGII 185 (267)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHHH
Confidence 9999999998878888899999999999999999999999998885 556799999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
.|+++++.|+.+.||+|++|+||+++|++....
T Consensus 186 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 218 (267)
T 4iiu_A 186 GATKALAIELAKRKITVNCIAPGLIDTGMIEME 218 (267)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC
T ss_pred HHHHHHHHHHhhcCeEEEEEEEeeecCCccccc
Confidence 999999999999999999999999999998643
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=258.94 Aligned_cols=192 Identities=28% Similarity=0.351 Sum_probs=170.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+.+. .+...+.+...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i 86 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF-GKI 86 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence 689999999999999999999999999999776544 444444444556689999999999999999999999999 799
Q ss_pred cEEEEcCC--CCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCC-CC-ccCCCCChhhhhhHH
Q 028868 80 NILINNAA--IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV-GG-VRGIPSVSLYGAYKG 155 (202)
Q Consensus 80 d~vi~~ag--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~-~~-~~~~~~~~~y~asK~ 155 (202)
|+|||||| .....++.+.+.++|++.+++|+.|++.++++++|+|++++.++||++||. .+ ..+.++...|++||+
T Consensus 87 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKa 166 (264)
T 3i4f_A 87 DFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKV 166 (264)
T ss_dssp CEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHH
T ss_pred CEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHH
Confidence 99999999 445567888999999999999999999999999999998888999999998 44 566778899999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
++++|+++++.|+.+.||+|++|+||+++|++.....+
T Consensus 167 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~ 204 (264)
T 3i4f_A 167 GLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQ 204 (264)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHH
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccH
Confidence 99999999999999999999999999999999876543
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=259.63 Aligned_cols=184 Identities=24% Similarity=0.267 Sum_probs=167.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhc-CCeEEEEEecCCCH----HHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNK-GFKVTGSVCDLSSR----EQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~----~~i~~~~~~~~~~ 74 (202)
|++|||||++|||+++|++|+++|++|++++| ++++++...+++... +.++.++.+|++|. ++++++++++.+.
T Consensus 12 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 91 (276)
T 1mxh_A 12 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 91 (276)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999999 988888888887655 66799999999999 9999999999999
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCH-----------HHHHHHHHHHhHhHHHHHHHHhHHHhcCCC------CeEEEecC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITA-----------EDMSTVSSTNFESVFHLSQLAHPLFKASGN------GSIVFISS 137 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~------~~iv~vsS 137 (202)
+ +++|+||||||.....++.+.+. ++|+..+++|+.+++.++++++|+|. ++. ++||++||
T Consensus 92 ~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~iv~isS 169 (276)
T 1mxh_A 92 F-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLSVVNLCD 169 (276)
T ss_dssp H-SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEECC
T ss_pred c-CCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcEEEEECc
Confidence 8 79999999999887777777888 99999999999999999999999997 444 89999999
Q ss_pred CCCccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 138 VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 138 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
..+..+.++...|++||++++.|+++++.|++++||+||+|+||+++|+
T Consensus 170 ~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~ 218 (276)
T 1mxh_A 170 AMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP 218 (276)
T ss_dssp GGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC
T ss_pred hhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC
Confidence 9999999999999999999999999999999999999999999999999
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-40 Score=263.15 Aligned_cols=185 Identities=25% Similarity=0.363 Sum_probs=169.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC------------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~------------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|++|||||++|||+++|++|+++|++|++++|+ .+.++....++...+.++.++.+|++|.+++++++
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 90 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSREL 90 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 689999999999999999999999999999987 67777777777777888999999999999999999
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC----
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---- 144 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---- 144 (202)
+++.+.+ +++|+||||||+.... .+.+.++|+..+++|+.|++.++++++|+|. +.++||++||..+..+.
T Consensus 91 ~~~~~~~-g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~ 165 (287)
T 3pxx_A 91 ANAVAEF-GKLDVVVANAGICPLG--AHLPVQAFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGLIAAAQPP 165 (287)
T ss_dssp HHHHHHH-SCCCEEEECCCCCCCC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC--TTCEEEEECCHHHHHHHHCCC
T ss_pred HHHHHHc-CCCCEEEECCCcCccc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh--cCcEEEEeccchhcccccccc
Confidence 9999999 7999999999987544 3378899999999999999999999999993 46899999999887665
Q ss_pred -------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 145 -------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 145 -------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++...|++||+++++++++++.|++++||+||+|+||+|+|+|...
T Consensus 166 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 218 (287)
T 3pxx_A 166 GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS 218 (287)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS
T ss_pred cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence 6778999999999999999999999999999999999999999864
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=258.11 Aligned_cols=189 Identities=28% Similarity=0.333 Sum_probs=169.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|+++ .|+.+.++...+++.+.+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~i 105 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF-GRL 105 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-CCC
Confidence 689999999999999999999999999876 788888888888888778899999999999999999999999999 799
Q ss_pred cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC---CCCeEEEecCCCCccCCC-CChhhhhhH
Q 028868 80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIP-SVSLYGAYK 154 (202)
Q Consensus 80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~-~~~~y~asK 154 (202)
|+||||||.... .++.+.+.++|++.+++|+.|++.+++.++|.|.+. +.++||++||.++..+.+ +...|++||
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 185 (272)
T 4e3z_A 106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK 185 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHH
Confidence 999999998754 678889999999999999999999999999999763 468999999999888766 678899999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++.|+++++.|+.+.||+|++|+||+++|++...
T Consensus 186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 221 (272)
T 4e3z_A 186 AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHAS 221 (272)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC------
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccc
Confidence 999999999999999999999999999999998754
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-40 Score=258.87 Aligned_cols=184 Identities=29% Similarity=0.365 Sum_probs=164.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.+++++..+++ +.++.++.+|++++++++++++++.+.+ +++|
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 81 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAF-GKID 81 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 78999999999999999999999999999999998877766543 4578999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCC-CC----CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 81 ILINNAAIAFVK-PT----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 81 ~vi~~ag~~~~~-~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
+||||||+.... ++ .+.+.++|+.++++|+.|++.++++++|+|.++ .|+||++||..+..+.++...|++||+
T Consensus 82 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa 160 (281)
T 3zv4_A 82 TLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNAGFYPNGGGPLYTATKH 160 (281)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSSSSSCHHHHHHHH
T ss_pred EEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecchhccCCCCCchhHHHHH
Confidence 999999986432 22 345567899999999999999999999999875 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++++++.|+++. |+||+|+||+++|+|...
T Consensus 161 a~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~ 194 (281)
T 3zv4_A 161 AVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGP 194 (281)
T ss_dssp HHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCC
T ss_pred HHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccc
Confidence 9999999999999876 999999999999998753
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-40 Score=257.92 Aligned_cols=180 Identities=28% Similarity=0.392 Sum_probs=165.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.+... ..++.++.+|++|+++++++++++.+.+ +++|
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 98 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIERF-GRID 98 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHHC-CCCC
Confidence 68999999999999999999999999999999865432 2258899999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--CCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~y~asK~a~~ 158 (202)
++|||||+....++.+.+.++|++.+++|+.|++.++++++|.|.+++.++||++||..+..+ .++...|++||++++
T Consensus 99 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~ 178 (260)
T 3un1_A 99 SLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLN 178 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHH
Confidence 999999998888888999999999999999999999999999999888899999999887643 446689999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++.|++++||+||+|+||+++|++..+
T Consensus 179 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~ 210 (260)
T 3un1_A 179 AVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA 210 (260)
T ss_dssp HHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG
T ss_pred HHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH
Confidence 99999999999999999999999999999764
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-40 Score=257.03 Aligned_cols=186 Identities=32% Similarity=0.411 Sum_probs=171.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++.. ++.++.+|++|.++++++++++.+++ +++|
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~d~~~v~~~~~~~~~~~-g~iD 88 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN---GGFAVEVDVTKRASVDAAMQKAIDAL-GGFD 88 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT---CCEEEECCTTCHHHHHHHHHHHHHHH-TCCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCeEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999999999998877766554432 57889999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|+..+++|+.+++.++++++|+|.+++ .++||++||..+..+.++...|++||++++.
T Consensus 89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 168 (263)
T 3ak4_A 89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFG 168 (263)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHH
Confidence 999999988777788899999999999999999999999999998776 6999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|+++.||+|++|+||+++|++...
T Consensus 169 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 199 (263)
T 3ak4_A 169 WTQALAREMAPKNIRVNCVCPGFVKTAMQER 199 (263)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBTTHHHHH
T ss_pred HHHHHHHHHhHcCeEEEEEecccccChhhhh
Confidence 9999999999999999999999999998654
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-40 Score=258.42 Aligned_cols=187 Identities=28% Similarity=0.394 Sum_probs=170.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+.+. .+...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i 108 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-GKL 108 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999999998754 555666676667789999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCC-ChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-VSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-~~~y~asK~a~~ 158 (202)
|+||||||.....++.+.+.++|+..+++|+.|++.++++++|+|+ +.++||++||..+..+.++ ...|++||++++
T Consensus 109 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~ 186 (283)
T 1g0o_A 109 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--IGGRLILMGSITGQAKAVPKHAVYSGSKGAIE 186 (283)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--TTCEEEEECCGGGTCSSCSSCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--cCCeEEEEechhhccCCCCCCcchHHHHHHHH
Confidence 9999999988777788899999999999999999999999999993 4689999999998887764 899999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++.|++++||+||+|+||+++|++...
T Consensus 187 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 218 (283)
T 1g0o_A 187 TFARCMAIDMADKKITVNVVAPGGIKTDMYHA 218 (283)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHH
T ss_pred HHHHHHHHHhcccCeEEEEEecCcccchhhhh
Confidence 99999999999999999999999999998654
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-41 Score=260.62 Aligned_cols=184 Identities=23% Similarity=0.316 Sum_probs=160.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.++... + .+.++.++.+|++|+++++++++.+.+ + +++|
T Consensus 10 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~---~~~~~~~~~~D~~~~~~v~~~~~~~~~-~-g~id 81 (257)
T 3tl3_A 10 AVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA---D---LGDRARFAAADVTDEAAVASALDLAET-M-GTLR 81 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH---H---TCTTEEEEECCTTCHHHHHHHHHHHHH-H-SCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH---h---cCCceEEEECCCCCHHHHHHHHHHHHH-h-CCCC
Confidence 689999999999999999999999999999997644322 2 255789999999999999999998877 7 7999
Q ss_pred EEEEcCCCCCCCC----CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc--------CCCCeEEEecCCCCccCCCCCh
Q 028868 81 ILINNAAIAFVKP----TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA--------SGNGSIVFISSVGGVRGIPSVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--------~~~~~iv~vsS~~~~~~~~~~~ 148 (202)
++|||||.....+ ..+.+.++|++.+++|+.|++.++++++|+|.+ ++.|+||++||..+..+.++..
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 161 (257)
T 3tl3_A 82 IVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQA 161 (257)
T ss_dssp EEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHH
T ss_pred EEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCc
Confidence 9999999864322 235799999999999999999999999999987 5678999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
.|++||+++++|+++++.|++++||+||+|+||+|+|++.....
T Consensus 162 ~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 205 (257)
T 3tl3_A 162 AYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP 205 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C
T ss_pred cHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc
Confidence 99999999999999999999999999999999999999987543
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-40 Score=256.24 Aligned_cols=190 Identities=25% Similarity=0.396 Sum_probs=172.7
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHH-HHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|++|||||+ +|||+++|++|+++|++|++++|+.+.. +...+++.+ .+.++.++.+|++|+++++++++++.+.+
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 99 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADF- 99 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHT-
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHc-
Confidence 689999999 9999999999999999999999876554 566666653 36789999999999999999999999998
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC--CCChhhhhhH
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--PSVSLYGAYK 154 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~~~~y~asK 154 (202)
+++|+||||||+....++.+.+.++|++.+++|+.|++.+++.++|+|++++.++||++||..+..+. ++...|++||
T Consensus 100 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK 179 (267)
T 3gdg_A 100 GQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAK 179 (267)
T ss_dssp SCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHHH
Confidence 79999999999988888889999999999999999999999999999998878999999999988765 5789999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++++++++.++.|+++. |+||+|+||+++|++.+...
T Consensus 180 ~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~~ 216 (267)
T 3gdg_A 180 AGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFVP 216 (267)
T ss_dssp HHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGSC
T ss_pred HHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhCC
Confidence 99999999999999877 99999999999999986543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-40 Score=255.52 Aligned_cols=190 Identities=30% Similarity=0.345 Sum_probs=175.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC---
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ--- 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~--- 76 (202)
|++|||||++|||+++|++|+++|++|+++ .|+.++++...+++...+.++.++.+|+++.++++++++++.+.++
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 87 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRT 87 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccc
Confidence 689999999999999999999999999885 7788888888888888888899999999999999999999988762
Q ss_pred --CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 77 --GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 77 --~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+++|++|||||+....++.+.+.++|++.+++|+.|++.+++.++|+|++ .++||++||.++..+.|+...|++||
T Consensus 88 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~Y~asK 165 (255)
T 3icc_A 88 GSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAATRISLPDFIAYSMTK 165 (255)
T ss_dssp SSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred cCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC--CCEEEEeCChhhccCCCCcchhHHhH
Confidence 24999999999987778888999999999999999999999999999954 57999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++++|+++++.|+.++||+|++|+||+++|++..+..
T Consensus 166 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~ 203 (255)
T 3icc_A 166 GAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELL 203 (255)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTT
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhc
Confidence 99999999999999999999999999999999987653
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-40 Score=256.79 Aligned_cols=188 Identities=26% Similarity=0.291 Sum_probs=170.4
Q ss_pred CEEEEecCCCchHHHHHHHHHH---CCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHH--
Q 028868 1 MTALVTGGTRGIGHATVEELAR---FGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTS-- 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~---~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~-- 73 (202)
|++|||||++|||+++|++|++ +|++|++++|++++++...+++... +.++.++.+|++|+++++++++++.+
T Consensus 7 k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP 86 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred cEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhcc
Confidence 6899999999999999999999 8999999999999988888887654 56899999999999999999999988
Q ss_pred HhCCCcc--EEEEcCCCCCC--CCCCC-CCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC--CCCeEEEecCCCCccCCCC
Q 028868 74 IFQGKLN--ILINNAAIAFV--KPTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVGGVRGIPS 146 (202)
Q Consensus 74 ~~~~~id--~vi~~ag~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~~~~~~~~ 146 (202)
.+ +++| +||||||+... .++.+ .+.++|+..+++|+.|++.++++++|+|.++ +.|+||++||.++..+.++
T Consensus 87 ~~-g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 165 (259)
T 1oaa_A 87 RP-EGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKG 165 (259)
T ss_dssp CC-TTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTT
T ss_pred cc-ccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCC
Confidence 55 5788 99999998643 45666 6899999999999999999999999999876 5689999999999999999
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
...|++||+++++++++++.|++ +|+||+|+||+++|+|....
T Consensus 166 ~~~Y~asKaa~~~~~~~la~e~~--~i~vn~v~PG~v~T~~~~~~ 208 (259)
T 1oaa_A 166 WGLYCAGKAARDMLYQVLAAEEP--SVRVLSYAPGPLDNDMQQLA 208 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCSBSSHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhhCC--CceEEEecCCCcCcchHHHH
Confidence 99999999999999999999996 39999999999999987643
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=258.96 Aligned_cols=183 Identities=27% Similarity=0.370 Sum_probs=165.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++ ..++.++.+|++|.++++++++++.+.+ +++|
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD 82 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH 82 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc-CCCc
Confidence 68999999999999999999999999999999988877766554 2468899999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++.+++|+.|++.++++++|+| ++ .++||++||..+. +.++...|++||++++.+
T Consensus 83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~ 159 (263)
T 2a4k_A 83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGL 159 (263)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-CHHHHHHHHHCSSHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-CCCCcHHHHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999 54 7899999999988 878889999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.++||+||+|+||+++|++...
T Consensus 160 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 189 (263)
T 2a4k_A 160 ARTLALELARKGVRVNVLLPGLIQTPMTAG 189 (263)
T ss_dssp HHHHHHHHTTTTCEEEEEEECSBCCGGGTT
T ss_pred HHHHHHHhhhhCcEEEEEEeCcCcCchhhh
Confidence 999999999999999999999999998764
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=254.89 Aligned_cols=189 Identities=20% Similarity=0.230 Sum_probs=170.8
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+ +|||+++|++|+++|++|++++|+++..+...+...+.+. ++.++.+|++|.++++++++++.+.+ +
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g 86 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV-G 86 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH-S
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh-C
Confidence 689999999 6699999999999999999999997655555544444444 79999999999999999999999999 7
Q ss_pred CccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 78 KLNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 78 ~id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
++|++|||||... ..++.+.+.++|+..+++|+.+++.+++.++|+|++ .|+||++||.++..+.++...|++|
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as 164 (266)
T 3oig_A 87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE--GGSIVTLTYLGGELVMPNYNVMGVA 164 (266)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGGGTSCCTTTHHHHHH
T ss_pred CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC--CceEEEEecccccccCCCcchhHHH
Confidence 9999999999875 467788999999999999999999999999999974 5899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+++++|+++++.|++++||+|++|+||+++|++.....
T Consensus 165 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 203 (266)
T 3oig_A 165 KASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS 203 (266)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc
Confidence 999999999999999999999999999999999876543
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=261.79 Aligned_cols=189 Identities=27% Similarity=0.338 Sum_probs=170.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCH-HHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSR-EQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~-~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|+.+++++..+++.+.+ .++.++.+|++|. ++++++++++.+++ ++
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~-g~ 91 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF-GK 91 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH-SS
T ss_pred cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC-CC
Confidence 689999999999999999999999999999999999999998887664 4799999999997 99999999999998 79
Q ss_pred ccEEEEcCCCCCC------------------------------CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC
Q 028868 79 LNILINNAAIAFV------------------------------KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG 128 (202)
Q Consensus 79 id~vi~~ag~~~~------------------------------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 128 (202)
+|+||||||+... .++.+.+.++++..+++|+.|++.+++.++|+|++++
T Consensus 92 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~ 171 (311)
T 3o26_A 92 LDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD 171 (311)
T ss_dssp CCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred CCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCC
Confidence 9999999998632 2445678999999999999999999999999999887
Q ss_pred CCeEEEecCCCCccCC-------------------------------------------CCChhhhhhHHHHHHHHHHHH
Q 028868 129 NGSIVFISSVGGVRGI-------------------------------------------PSVSLYGAYKGAMNQLTKNLA 165 (202)
Q Consensus 129 ~~~iv~vsS~~~~~~~-------------------------------------------~~~~~y~asK~a~~~~~~~la 165 (202)
.++||++||.++..+. ++...|++||++++++++.++
T Consensus 172 ~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la 251 (311)
T 3o26_A 172 SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLA 251 (311)
T ss_dssp SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHH
Confidence 8999999999887653 456789999999999999999
Q ss_pred HHHccCCcEEEEeeCCcccCCCccchh
Q 028868 166 CEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 166 ~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
.+++ +|+||+|+||+|+|+|.....
T Consensus 252 ~e~~--~i~v~~v~PG~v~T~~~~~~~ 276 (311)
T 3o26_A 252 NKIP--KFQVNCVCPGLVKTEMNYGIG 276 (311)
T ss_dssp HHCT--TSEEEEECCCSBCSGGGTTCC
T ss_pred hhcC--CceEEEecCCceecCCcCCCC
Confidence 9986 499999999999999987543
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=254.00 Aligned_cols=185 Identities=18% Similarity=0.193 Sum_probs=161.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|+++.++++++++++.+ ..|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~----~~d 74 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS----IPS 74 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS----CCS
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh----cCC
Confidence 67999999999999999999999999999999998887776654 55788999999999999999887643 349
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++.+++|+.|++.+++.++|+|.+++ ++||++||..+..+.++...|++||++++.|
T Consensus 75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 153 (230)
T 3guy_A 75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTAAQQPKAQESTYCAVKWAVKGL 153 (230)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecccCCCCCCCchhHHHHHHHHHH
Confidence 999999998888888999999999999999999999999999998765 4999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+++++.|++++||+||+|+||+++|++......
T Consensus 154 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~ 186 (230)
T 3guy_A 154 IESVRLELKGKPMKIIAVYPGGMATEFWETSGK 186 (230)
T ss_dssp HHHHHHHTTTSSCEEEEEEECCC----------
T ss_pred HHHHHHHHHhcCeEEEEEECCcccChHHHhcCC
Confidence 999999999999999999999999999875443
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-39 Score=251.00 Aligned_cols=189 Identities=28% Similarity=0.351 Sum_probs=174.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH-HhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW-KNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~-~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++ ...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 3 k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~i 81 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-GAI 81 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence 68999999999999999999999999999999998888877776 4445678999999999999999999999998 789
Q ss_pred cEEEEcCCCCCCCC---CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 80 NILINNAAIAFVKP---TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 80 d~vi~~ag~~~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
|+||||||.....+ +.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a 161 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGA 161 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHH
Confidence 99999999876555 777899999999999999999999999999988778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.+++.++.|+.++||++++|+||+++|++...
T Consensus 162 ~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~ 195 (250)
T 2cfc_A 162 VLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQW 195 (250)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHH
T ss_pred HHHHHHHHHHHhcccCeEEEEEEeCcCccCcccc
Confidence 9999999999999899999999999999998764
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-39 Score=251.55 Aligned_cols=190 Identities=27% Similarity=0.359 Sum_probs=177.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||++++++|+++|++|++++| ++++++...+++...+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i 86 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-GKL 86 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999 8888888878877667789999999999999999999999998 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|+||||||.....++.+.+.++|++.+++|+.+++.++++++|.|.+++ .++||++||..+..+.++...|++||++++
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 166 (261)
T 1gee_A 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMK 166 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHHH
Confidence 9999999988777778889999999999999999999999999998876 789999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
.+++.++.|+.+.||++++|+||+++|++....
T Consensus 167 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 199 (261)
T 1gee_A 167 LMTETLALEYAPKGIRVNNIGPGAINTPINAEK 199 (261)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH
T ss_pred HHHHHHHHHhcccCeEEEEEeeCCcCCchhhhc
Confidence 999999999998999999999999999987643
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=253.23 Aligned_cols=191 Identities=61% Similarity=0.946 Sum_probs=159.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|+++.++++++++++.+.+++++|
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id 94 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD 94 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCc
Confidence 68999999999999999999999999999999999888888888776778999999999999999999999998856899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+.++...|+++|++++.+
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 174 (266)
T 1xq1_A 95 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQL 174 (266)
T ss_dssp EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHHHHH
Confidence 99999998877778888999999999999999999999999999887789999999999999889999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+.++||++++|+||++.|++....
T Consensus 175 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 205 (266)
T 1xq1_A 175 ARNLACEWASDGIRANAVAPAVIATPLAEAV 205 (266)
T ss_dssp HHHHHHHHGGGTCEEEEEECCSCC-------
T ss_pred HHHHHHHHhHhCcEEEEEeeCCCccchhhhh
Confidence 9999999998999999999999999987643
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=259.96 Aligned_cols=179 Identities=32% Similarity=0.412 Sum_probs=166.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.+.+.. ...+.+|+++.++++++++++.+.+ +++|
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----------~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iD 96 (266)
T 3uxy_A 29 KVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----------DLHLPGDLREAAYADGLPGAVAAGL-GRLD 96 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----------SEECCCCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----------hhccCcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999998654321 2345799999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||+....++.+.+.++|+..+++|+.|++.++++++|+|++++.|+||++||..+..+.++...|++||++++++
T Consensus 97 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l 176 (266)
T 3uxy_A 97 IVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASL 176 (266)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHH
Confidence 99999999888888899999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+++.||+||+|+||+++|++.+..
T Consensus 177 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~ 207 (266)
T 3uxy_A 177 TQCMGMDHAPQGIRINAVCPNEVNTPMLRTG 207 (266)
T ss_dssp HHHHHHHHGGGTEEEEEEEESSBCCHHHHHH
T ss_pred HHHHHHHhhhcCcEEEEEeeCCCcchHhhhh
Confidence 9999999999999999999999999987643
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=255.21 Aligned_cols=188 Identities=21% Similarity=0.246 Sum_probs=163.9
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+ +|||+++|++|+++|++|++++|+.... ...+++......+.++.+|++|+++++++++++.+++ ++
T Consensus 15 k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~ 92 (271)
T 3ek2_A 15 KRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFK-DRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW-DS 92 (271)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC-SC
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhH-HHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence 789999999 9999999999999999999999985444 3344443334458899999999999999999999998 79
Q ss_pred ccEEEEcCCCCCC----CCCCC-CCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 79 LNILINNAAIAFV----KPTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 79 id~vi~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+|++|||||+... .++.+ .+.++|+..+++|+.+++.++++++|+|++ .++||++||.++..+.++...|++|
T Consensus 93 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as 170 (271)
T 3ek2_A 93 LDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLGAERAIPNYNTMGLA 170 (271)
T ss_dssp EEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred CCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccccccCCCCccchhHH
Confidence 9999999998754 55555 899999999999999999999999999975 5899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+++++|+++++.|++++||+|++|+||+|+|++.....
T Consensus 171 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 209 (271)
T 3ek2_A 171 KAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK 209 (271)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc
Confidence 999999999999999999999999999999999986543
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-39 Score=249.43 Aligned_cols=188 Identities=28% Similarity=0.408 Sum_probs=175.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 92 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE-GRVD 92 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999988888888887767789999999999999999999999998 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC--hhhhhhHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~y~asK~a~ 157 (202)
+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|.+++.++||++||..+..+.++. ..|+++|+++
T Consensus 93 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~ 172 (260)
T 3awd_A 93 ILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGV 172 (260)
T ss_dssp EEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHHHH
Confidence 9999999876 667788899999999999999999999999999987778999999999988887777 8999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+.+++.++.|+.+.||++++|+||+++|++..
T Consensus 173 ~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~ 204 (260)
T 3awd_A 173 HQYIRSLAAEWAPHGIRANAVAPTYIETTLTR 204 (260)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTH
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeeeeccchhh
Confidence 99999999999989999999999999999876
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=256.18 Aligned_cols=186 Identities=19% Similarity=0.256 Sum_probs=168.0
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+ +|||+++|++|+++|++|++++|+++ .+...+++......+.++.+|++|.++++++++++.+.+ ++
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 84 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL-GS 84 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-SC
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence 689999999 99999999999999999999999976 444555554432347889999999999999999999998 79
Q ss_pred ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|+||||||+... .++.+.+.++|+..+++|+.|++.++++++|+|++ .|+||++||..+..+.++...|++||
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK 162 (275)
T 2pd4_A 85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGSTKYMAHYNVMGLAK 162 (275)
T ss_dssp EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchhcCCCCCchhhHHHH
Confidence 9999999998754 56778899999999999999999999999999975 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++.++++++.|++++||+||+|+||+|+|++...
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~ 198 (275)
T 2pd4_A 163 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSG 198 (275)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGG
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhh
Confidence 999999999999999999999999999999998764
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-39 Score=255.97 Aligned_cols=188 Identities=21% Similarity=0.265 Sum_probs=169.2
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+ +|||+++|++|+++|++|++++|+. ..+..+++.+...++.++.+|++|.++++++++++.+.+ ++
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 103 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW-DG 103 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC-SS
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence 689999998 7799999999999999999999987 344455554444568899999999999999999999998 79
Q ss_pred ccEEEEcCCCCCC----CCCCC-CCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 79 LNILINNAAIAFV----KPTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 79 id~vi~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+|+||||||+... .++.+ .+.++|+..+++|+.+++.++++++|+|.++ .++||++||.++..+.++...|++|
T Consensus 104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as 182 (280)
T 3nrc_A 104 LDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIGAEKAMPSYNTMGVA 182 (280)
T ss_dssp CCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGGGTSCCTTTHHHHHH
T ss_pred CCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccccccCCCCchhhHHH
Confidence 9999999998754 34444 8999999999999999999999999999866 6999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|++++.|+++++.|++++||+|++|+||+|+|++.....
T Consensus 183 Kaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 221 (280)
T 3nrc_A 183 KASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS 221 (280)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT
T ss_pred HHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc
Confidence 999999999999999999999999999999999986543
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=251.09 Aligned_cols=189 Identities=26% Similarity=0.326 Sum_probs=175.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||++++++|+++|++|++ .+|++++++...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i 80 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI 80 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence 78999999999999999999999999998 5899888888777777667789999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||.....++.+.+.++|++.+++|+.+++.+++.+.|+|.+++.++||++||..+..+.++...|+++|++++.
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 160 (244)
T 1edo_A 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 160 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHH
Confidence 99999999887777788899999999999999999999999999987778999999999888888999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++.|+.++||++++|+||+++|++...
T Consensus 161 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 191 (244)
T 1edo_A 161 FSKTAAREGASRNINVNVVCPGFIASDMTAK 191 (244)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred HHHHHHHHhhhcCCEEEEEeeCccccchhhh
Confidence 9999999999899999999999999998754
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=256.40 Aligned_cols=184 Identities=28% Similarity=0.412 Sum_probs=168.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++. .+.++.+|++|+++++++++++.+.+ +++|
T Consensus 10 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD 84 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRRF-GRLD 84 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999888776665542 37889999999999999999999999 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||... ..++.+.+.++|+..+++|+.|++.++++++|+|+++ .++||++||..+..+.++...|+++|++++.
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 163 (270)
T 1yde_A 85 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTA 163 (270)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHHHH
Confidence 9999999864 3577888999999999999999999999999999765 5899999999988898999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|++++||+||+|+||+++|++...
T Consensus 164 ~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~ 194 (270)
T 1yde_A 164 MTKALALDESPYGVRVNCISPGNIWTPLWEE 194 (270)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHHhhhhCcEEEEEEeCccccchhhh
Confidence 9999999999999999999999999998654
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=252.17 Aligned_cols=179 Identities=26% Similarity=0.320 Sum_probs=160.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+++. ...+ +.++.+|++|+++++++++++.+.+ +++|
T Consensus 8 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~~-g~id 76 (250)
T 2fwm_X 8 KNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQYP--FATEVMDVADAAQVAQVCQRLLAET-ERLD 76 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCCS--SEEEECCTTCHHHHHHHHHHHHHHC-SCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcCC--ceEEEcCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999998752 1112 7788999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.+++.++++++|+|++++.++||++||..+..+.++...|++||++++.+
T Consensus 77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 156 (250)
T 2fwm_X 77 ALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSL 156 (250)
T ss_dssp EEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|++++||+||+|+||+++|++...
T Consensus 157 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 186 (250)
T 2fwm_X 157 ALSVGLELAGSGVRCNVVSPGSTDTDMQRT 186 (250)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCC-------
T ss_pred HHHHHHHhCccCCEEEEEECCcccCccccc
Confidence 999999999999999999999999998754
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=254.76 Aligned_cols=187 Identities=25% Similarity=0.297 Sum_probs=166.9
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+ +|||+++|++|+++|++|++++|+++ .+...+++......+.++.+|++|.++++++++++.+.+ ++
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 99 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW-GS 99 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-SC
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc-CC
Confidence 689999999 99999999999999999999999975 444455554432347889999999999999999999998 79
Q ss_pred ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|+||||||.... .++.+.+.++|+..+++|+.|++.++++++|+|.++ .++||++||..+..+.++...|++||
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK 178 (285)
T 2p91_A 100 LDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGAEKVVPHYNVMGIAK 178 (285)
T ss_dssp CCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchhccCCCCccHHHHHH
Confidence 9999999998753 567788999999999999999999999999999754 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++++++.|+++.||+||+|+||+++|++...
T Consensus 179 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 214 (285)
T 2p91_A 179 AALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYS 214 (285)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhc
Confidence 999999999999999999999999999999998654
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=249.40 Aligned_cols=180 Identities=33% Similarity=0.482 Sum_probs=165.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++ ..+++ + +.++.+|+++ ++++++++++.+.+ +++|
T Consensus 3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~-g~id 72 (239)
T 2ekp_A 3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---G--AVPLPTDLEK-DDPKGLVKRALEAL-GGLH 72 (239)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---T--CEEEECCTTT-SCHHHHHHHHHHHH-TSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---C--cEEEecCCch-HHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999999866 22333 2 7788999999 99999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC--CCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--PSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--~~~~~y~asK~a~~ 158 (202)
++|||||.....++.+.+.++|++.+++|+.+++.++++++|+|++++.++||++||..+..+. ++...|++||++++
T Consensus 73 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~ 152 (239)
T 2ekp_A 73 VLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALL 152 (239)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHH
Confidence 9999999887778888999999999999999999999999999988778999999999998887 88999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++++.|+.++||++|+|+||+++|++...
T Consensus 153 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 184 (239)
T 2ekp_A 153 GLTRALAKEWARLGIRVNLLCPGYVETEFTLP 184 (239)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHH
T ss_pred HHHHHHHHHhhhcCcEEEEEEeCCccCchhhc
Confidence 99999999999999999999999999998754
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=246.87 Aligned_cols=185 Identities=26% Similarity=0.345 Sum_probs=164.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+||||++++++|+++|++|++++|++++++...+++. ++.++.+|++|.++++++++++.+.+ +++|
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 80 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAF-GELS 80 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 679999999999999999999999999999999887776665542 57888999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|+..+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.+
T Consensus 81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 160 (234)
T 2ehd_A 81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGL 160 (234)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHH
Confidence 99999998877778889999999999999999999999999999987789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.|+.+.||++++|+||+++|++...
T Consensus 161 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 190 (234)
T 2ehd_A 161 AGAAMLDLREANVRVVNVLPGSVDTGFAGN 190 (234)
T ss_dssp HHHHHHHHGGGTEEEEEEECC---------
T ss_pred HHHHHHHHhhcCcEEEEEEeCCCcCCcccc
Confidence 999999999999999999999999998764
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-39 Score=254.29 Aligned_cols=186 Identities=22% Similarity=0.308 Sum_probs=169.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++...+++ +.++.++.+|++|.++++++++++ +.+ +++|
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~-~~~-~~id 105 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA-NQL-GRLR 105 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH-TTS-SEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH-HHh-CCCC
Confidence 58999999999999999999999999999999999888887776 457999999999999999999999 776 7899
Q ss_pred EEEEc-CCCCCCCCC-----CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc------CCCCeEEEecCCCCccCCCCCh
Q 028868 81 ILINN-AAIAFVKPT-----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKA------SGNGSIVFISSVGGVRGIPSVS 148 (202)
Q Consensus 81 ~vi~~-ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~------~~~~~iv~vsS~~~~~~~~~~~ 148 (202)
++||| +|.....++ .+.+.++|++.+++|+.+++.+++.++|.|.+ ++.++||++||..+..+.++..
T Consensus 106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 185 (281)
T 3ppi_A 106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQT 185 (281)
T ss_dssp EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCH
T ss_pred eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCc
Confidence 99999 555444333 36889999999999999999999999999986 4578999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
.|++||+++++++++++.|+.+.||+|++|+||+|+|++....
T Consensus 186 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~ 228 (281)
T 3ppi_A 186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV 228 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc
Confidence 9999999999999999999999999999999999999987654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-39 Score=253.64 Aligned_cols=188 Identities=26% Similarity=0.333 Sum_probs=175.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+++.++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~iD 110 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI-GDVS 110 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC-CCCc
Confidence 689999999999999999999999999999999998888888887777789999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus 111 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l 190 (272)
T 1yb1_A 111 ILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGF 190 (272)
T ss_dssp EEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHH
Confidence 99999998877777888899999999999999999999999999887789999999999998888889999999999999
Q ss_pred HHHHHHHHc---cCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWA---KDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~---~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.++.|+. +.||++++|+||+++|++..
T Consensus 191 ~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~ 222 (272)
T 1yb1_A 191 HKTLTDELAALQITGVKTTCLCPNFVNTGFIK 222 (272)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEEETHHHHCSTT
T ss_pred HHHHHHHHHHhCCCCeEEEEEeCCcccCCccc
Confidence 999999996 67999999999999999865
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=252.28 Aligned_cols=183 Identities=31% Similarity=0.420 Sum_probs=151.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++. .++.++.+|+++.+++++++++. +++|
T Consensus 15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~-----~~id 86 (249)
T 3f9i_A 15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK---DNYTIEVCNLANKEECSNLISKT-----SNLD 86 (249)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC---SSEEEEECCTTSHHHHHHHHHTC-----SCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc---cCccEEEcCCCCHHHHHHHHHhc-----CCCC
Confidence 689999999999999999999999999999999988888777663 36889999999999988887653 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|+..+++|+.|++.++++++|+|.+++.++||++||.++..+.++...|++||++++++
T Consensus 87 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 166 (249)
T 3f9i_A 87 ILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGM 166 (249)
T ss_dssp EEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHH
Confidence 99999999877777788999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++++.|+.++||++++|+||+++|++....
T Consensus 167 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 197 (249)
T 3f9i_A 167 TKSLSYEVATRGITVNAVAPGFIKSDMTDKL 197 (249)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBC------C
T ss_pred HHHHHHHHHHcCcEEEEEecCccccCccccc
Confidence 9999999999999999999999999987654
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=256.00 Aligned_cols=178 Identities=30% Similarity=0.430 Sum_probs=159.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++ .+.++.+|++|+++++++++++.+.+ +++|
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~iD 89 (253)
T 2nm0_A 22 RSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKEIEETH-GPVE 89 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHHHHHHT-CSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999875432 16788999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.|++.++++++|.|++++.++||++||.++..+.++...|+++|++++.+
T Consensus 90 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 169 (253)
T 2nm0_A 90 VLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGF 169 (253)
T ss_dssp EEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHH
Confidence 99999998877778888999999999999999999999999999887789999999999998888889999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.|++++||+||+|+||+++|++...
T Consensus 170 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 199 (253)
T 2nm0_A 170 ARSLARELGSRNITFNVVAPGFVDTDMTKV 199 (253)
T ss_dssp HHHHHHHHCSSSEEEEEEEECSBCC-----
T ss_pred HHHHHHHhhhcCeEEEEEEeCcCcCcchhh
Confidence 999999999999999999999999998764
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=254.34 Aligned_cols=189 Identities=31% Similarity=0.396 Sum_probs=173.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+||||++++++|+++|++|++++|++++++...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 45 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-~~id 123 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH-KNVD 123 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC-SCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999988888888887667789999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.|++.+++.++|.|.+++.++||++||..+..+.++...|+++|++++.+
T Consensus 124 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 203 (285)
T 2c07_A 124 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGF 203 (285)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHHHH
Confidence 99999999877788889999999999999999999999999999877779999999999998989999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+.||++++|+||+++|++...
T Consensus 204 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 233 (285)
T 2c07_A 204 TKSLAKELASRNITVNAIAPGFISSDMTDK 233 (285)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCC-----
T ss_pred HHHHHHHHHHhCcEEEEEEeCcEecCchhh
Confidence 999999999899999999999999998764
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-39 Score=252.65 Aligned_cols=177 Identities=28% Similarity=0.349 Sum_probs=166.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++ +.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~iD 76 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY-GSIS 76 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence 689999999999999999999999999999998754 3467889999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.|++.++++++|.|++++.++||++||.++..+.++...|++||++++.+
T Consensus 77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 156 (264)
T 2dtx_A 77 VLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGL 156 (264)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+. |+||+|+||+++|++...
T Consensus 157 ~~~la~e~~~~-i~vn~v~PG~v~t~~~~~ 185 (264)
T 2dtx_A 157 TKSIALDYAPL-LRCNAVCPATIDTPLVRK 185 (264)
T ss_dssp HHHHHHHHTTT-SEEEEEEECSBCSHHHHH
T ss_pred HHHHHHHhcCC-cEEEEEEeCCCcCcchhh
Confidence 99999999888 999999999999998654
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-39 Score=250.41 Aligned_cols=187 Identities=26% Similarity=0.350 Sum_probs=168.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+.++++...+++ +.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id 88 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF-GRVD 88 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence 68999999999999999999999999999999988887776665 4568999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCC------CCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC------CCCeEEEecCCCCccCCCCCh
Q 028868 81 ILINNAAIAFVKPTV------DITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS~~~~~~~~~~~ 148 (202)
+||||||.....++. +.+.++|+..+++|+.+++.+++++.|+|.++ +.++||++||..+..+.++..
T Consensus 89 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~ 168 (265)
T 2o23_A 89 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA 168 (265)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred EEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCc
Confidence 999999987554443 37899999999999999999999999999876 578999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
.|+++|++++.+++.++.|+.++||++++|+||+++|++....
T Consensus 169 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 211 (265)
T 2o23_A 169 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL 211 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc
Confidence 9999999999999999999999999999999999999987643
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=247.77 Aligned_cols=189 Identities=30% Similarity=0.396 Sum_probs=174.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+++.++...+++... .++.++.+|++|+++++++++.+.+.+ +++|
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 84 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF-GPVS 84 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 68999999999999999999999999999999998887777666432 468999999999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC-CeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|++.+++|+.|++.+++.++|.|++++. ++||++||..+..+.++...|+++|++++.
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 164 (251)
T 1zk4_A 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRI 164 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHHH
Confidence 9999999887777888999999999999999999999999999987765 899999999999999999999999999999
Q ss_pred HHHHHHHHHc--cCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++++++.|+. +.||++++|+||+++|++....
T Consensus 165 ~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~ 198 (251)
T 1zk4_A 165 MSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL 198 (251)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS
T ss_pred HHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc
Confidence 9999999998 8899999999999999987643
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=252.03 Aligned_cols=186 Identities=22% Similarity=0.273 Sum_probs=166.7
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+ +|||+++|++|+++|++|++++|+++ .+...+++.+....+.++.+|++|+++++++++++.+.+ ++
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 86 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-GG 86 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence 689999999 99999999999999999999999975 344444544332347889999999999999999999999 79
Q ss_pred ccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|+||||||.... .++.+.+.++|+..+++|+.|++.++++++|+|++ .|+||++||..+..+.++...|++||
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK 164 (261)
T 2wyu_A 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAK 164 (261)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccccCCCCCchHHHHHH
Confidence 9999999998653 56778899999999999999999999999999964 48999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++.+++.++.|++++||+||+|+||+++|++...
T Consensus 165 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 200 (261)
T 2wyu_A 165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARS 200 (261)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGG
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhh
Confidence 999999999999999999999999999999998654
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-40 Score=253.48 Aligned_cols=178 Identities=29% Similarity=0.415 Sum_probs=155.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++.. ..+.+|++|+++++++++++.+.+ +++|
T Consensus 16 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----------~~~~~D~~~~~~~~~~~~~~~~~~-g~id 83 (247)
T 1uzm_A 16 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----------FGVEVDVTDSDAVDRAFTAVEEHQ-GPVE 83 (247)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----------EEEECCTTCHHHHHHHHHHHHHHH-SSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----------cCeeccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999999999987544321 137899999999999999999998 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|+..+++|+.|++.++++++|+|++++.++||++||..+..+.++...|++||++++.+
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 163 (247)
T 1uzm_A 84 VLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGM 163 (247)
T ss_dssp EEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHH
Confidence 99999998877778889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.|+.++||+||+|+||+++|++...
T Consensus 164 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 193 (247)
T 1uzm_A 164 ARSIARELSKANVTANVVAPGYIDTDMTRA 193 (247)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHH
T ss_pred HHHHHHHhhhcCcEEEEEEeCCCcccchhh
Confidence 999999999999999999999999998654
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=251.20 Aligned_cols=189 Identities=29% Similarity=0.370 Sum_probs=169.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-------CeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-------FKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-------~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++...+ .++.++.+|++|.++++++++.+.+
T Consensus 8 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 87 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQA 87 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999988877766654433 5688999999999999999999999
Q ss_pred HhCCCc-cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhh
Q 028868 74 IFQGKL-NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYG 151 (202)
Q Consensus 74 ~~~~~i-d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~ 151 (202)
.+ +++ |+||||||.....++.+.+.++|+..+++|+.|++.+++++.|.|.+++ .++||++||..+..+.++...|+
T Consensus 88 ~~-g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~ 166 (264)
T 2pd6_A 88 CF-SRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYA 166 (264)
T ss_dssp HH-SSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHHH
T ss_pred Hh-CCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhhH
Confidence 98 687 9999999988777778889999999999999999999999999998765 68999999999899999999999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+||++++.+++.++.|+.+.||++++|+||+++|++...
T Consensus 167 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 205 (264)
T 2pd6_A 167 ASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK 205 (264)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC---
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh
Confidence 999999999999999999999999999999999998754
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=250.20 Aligned_cols=189 Identities=32% Similarity=0.466 Sum_probs=154.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||++++++|+++|++|+++ .|+++.++...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 84 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF-GRI 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence 689999999999999999999999999998 677777777777777667789999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.
T Consensus 85 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 164 (247)
T 2hq1_A 85 DILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIG 164 (247)
T ss_dssp CEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHHH
Confidence 99999999877667777889999999999999999999999999987778999999999999998999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++.|+.+.||++++|+||+++|++...
T Consensus 165 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 195 (247)
T 2hq1_A 165 FTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV 195 (247)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred HHHHHHHHHHHcCcEEEEEEEEEEeccchhh
Confidence 9999999999999999999999999997654
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-39 Score=247.79 Aligned_cols=189 Identities=33% Similarity=0.362 Sum_probs=175.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+||||++++++|+++|++|++++|++++++...+++.. .+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 86 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLV-DGI 86 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHS-SCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhc-CCC
Confidence 6899999999999999999999999999999999888877777654 35678999999999999999999999998 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+||||||.....++.+.+.++|++.+++|+.+++.+++.++|.|.+++.++||++||..+..+.++...|+++|++++.
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 166 (248)
T 2pnf_A 87 DILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIG 166 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHHHH
Confidence 99999999887777788899999999999999999999999999987778999999999888888899999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++.|+.+.||++++|+||+++|++...
T Consensus 167 ~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~ 197 (248)
T 2pnf_A 167 FTKSLAKELAPRNVLVNAVAPGFIETDMTAV 197 (248)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCCGGGGG
T ss_pred HHHHHHHHhcccCeEEEEEEeceecCchhhh
Confidence 9999999999889999999999999998754
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-39 Score=248.49 Aligned_cols=189 Identities=31% Similarity=0.398 Sum_probs=175.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEE-EEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTG-SVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~-~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+||||++++++|+++|++|+++ +|++++++...+++...+.++.. +.+|++|.++++++++++.+.+ ++
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~ 80 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVL-GG 80 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHH-TC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhc-CC
Confidence 689999999999999999999999999998 89988888887777766666666 8999999999999999999998 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|++|||||.....++.+.+.++|++.+++|+.+++.+++.++|.|++++.++||++||..+..+.++...|+++|++++
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 160 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLI 160 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHH
Confidence 99999999988777778889999999999999999999999999998877799999999988888899999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.+++.++.|+.+.||+++.|+||+++|++...
T Consensus 161 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 192 (245)
T 2ph3_A 161 GFTRAVAKEYAQRGITVNAVAPGFIETEMTER 192 (245)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT
T ss_pred HHHHHHHHHHHHcCeEEEEEEEEeecCcchhh
Confidence 99999999999889999999999999998654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=247.07 Aligned_cols=188 Identities=31% Similarity=0.420 Sum_probs=174.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+||||++++++|+++|++|++++|++++++...+++...+.++.++.+|++|+++++++++++.+.+ +++|
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 90 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-GKVD 90 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 689999999999999999999999999999999988888888887767789999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++ +.+.++|+..+++|+.+++.++++++|+|++++.++||++||..+..+.++...|+++|++++.+
T Consensus 91 ~vi~~Ag~~~~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 169 (255)
T 1fmc_A 91 ILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL 169 (255)
T ss_dssp EEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHH
Confidence 99999998766555 68899999999999999999999999999887789999999999999989999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.++.|+.+.||++++|+||++.|++...
T Consensus 170 ~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~ 199 (255)
T 1fmc_A 170 VRNMAFDLGEKNIRVNGIAPGAILTDALKS 199 (255)
T ss_dssp HHHHHHHHHTTTEEEEEEEECSBCSHHHHT
T ss_pred HHHHHHHhhhcCcEEEEEecccCcchhhhh
Confidence 999999999899999999999999987643
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=252.60 Aligned_cols=186 Identities=17% Similarity=0.263 Sum_probs=165.8
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+ +|||+++|++|+++|++|++++|++ +.+...+++.+......++.+|++|+++++++++++.+.+ ++
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 87 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW-PK 87 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC-SS
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 689999999 9999999999999999999999987 4444455554432335788999999999999999999998 79
Q ss_pred ccEEEEcCCCCCC----CCCCC-CCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 79 LNILINNAAIAFV----KPTVD-ITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 79 id~vi~~ag~~~~----~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+|+||||||.... .++.+ .+.++|+..+++|+.|++.++++++|+|.+ .|+||++||..+..+.++...|++|
T Consensus 88 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~s 165 (265)
T 1qsg_A 88 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLA 165 (265)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred CCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhhccCCCCchHHHHH
Confidence 9999999998653 55666 899999999999999999999999999974 4899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|++++.++++++.|++++||+||+|+||+++|++...
T Consensus 166 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~ 202 (265)
T 1qsg_A 166 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG 202 (265)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGG
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhc
Confidence 9999999999999999999999999999999998754
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=250.47 Aligned_cols=178 Identities=22% Similarity=0.228 Sum_probs=162.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-e--CChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-S--RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~--r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|+++ + |++++++...+++ .+. |+.|.++++++++++.+.+ +
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~~-------~~~~~~~v~~~~~~~~~~~-g 71 (244)
T 1zmo_A 2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PGT-------IALAEQKPERLVDATLQHG-E 71 (244)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TTE-------EECCCCCGGGHHHHHGGGS-S
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CCC-------cccCHHHHHHHHHHHHHHc-C
Confidence 789999999999999999999999999999 6 9988887776665 222 3337778888999998888 7
Q ss_pred CccEEEEcCCCCCC---CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 78 KLNILINNAAIAFV---KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 78 ~id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
++|+||||||.... .++.+.+.++|+..+++|+.|++.++++++|+|++++.++||++||..+..+.++...|++||
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 151 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPAR 151 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHH
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHH
Confidence 99999999998876 788899999999999999999999999999999887789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+++++|+++++.|++++||+||+|+||+++|+|.
T Consensus 152 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~ 185 (244)
T 1zmo_A 152 AATVALVESAAKTLSRDGILLYAIGPNFFNNPTY 185 (244)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTT
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcc
Confidence 9999999999999999999999999999999997
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-38 Score=247.50 Aligned_cols=188 Identities=27% Similarity=0.327 Sum_probs=173.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||++++++|+++|++|++++|+.++++...+++...+ ..+.++.+|++|.++++++++++.+.+ ++
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g~ 111 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH-SG 111 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH-CC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC-CC
Confidence 689999999999999999999999999999999988888888777654 568899999999999999999999998 78
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC--CeEEEecCCCCc--cCCCCChhhhhhH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN--GSIVFISSVGGV--RGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~--~~iv~vsS~~~~--~~~~~~~~y~asK 154 (202)
+|+||||||.....++.+.+.++|+..+++|+.+++.+++.++|.|++++. ++||++||..+. .+.++...|+++|
T Consensus 112 iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK 191 (279)
T 1xg5_A 112 VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATK 191 (279)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHHH
Confidence 999999999887777888899999999999999999999999999987653 899999999887 5677888999999
Q ss_pred HHHHHHHHHHHHHHc--cCCcEEEEeeCCcccCCCcc
Q 028868 155 GAMNQLTKNLACEWA--KDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 155 ~a~~~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~ 189 (202)
++++.+++.++.|+. +.||++++|+||+++|++..
T Consensus 192 ~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~ 228 (279)
T 1xg5_A 192 YAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF 228 (279)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh
Confidence 999999999999998 78999999999999999853
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-39 Score=249.54 Aligned_cols=180 Identities=24% Similarity=0.332 Sum_probs=161.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++... ++ .++.++.+|++|+++++++. +.+ +++|
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~~~~----~~~-~~id 76 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQIDQFA----NEV-ERLD 76 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHHHHH----HHC-SCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHHHHH----HHh-CCCC
Confidence 68999999999999999999999999999999987665443 22 25888999999999988443 445 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC-CChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|+..+++|+.+++.++++++|+|.+++.++||++||.++..+.+ +...|++||++++.
T Consensus 77 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~ 156 (246)
T 2ag5_A 77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIG 156 (246)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHH
Confidence 99999998877788889999999999999999999999999999877789999999999988877 88999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++++.|++++||++|+|+||+++|++...
T Consensus 157 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 187 (246)
T 2ag5_A 157 LTKSVAADFIQQGIRCNCVCPGTVDTPSLQE 187 (246)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESCEECHHHHH
T ss_pred HHHHHHHHhhhcCcEEEEEeeCcCcCcchhh
Confidence 9999999999999999999999999998654
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-39 Score=251.62 Aligned_cols=183 Identities=21% Similarity=0.216 Sum_probs=163.8
Q ss_pred CEEEEecC--CCchHHHHHHHHHHCCCEEEEEeCChhHH-HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGa--s~giG~a~a~~l~~~g~~Vi~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++||||| ++|||+++|++|+++|++|++++|+.++. +...++ .+.++.++.+|++|+++++++++++.+.+ +
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 83 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGRVTEAI-G 83 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHHHHHHH-C
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 68999999 99999999999999999999999987653 333332 24568899999999999999999999998 6
Q ss_pred ---CccEEEEcCCCCC-----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChh
Q 028868 78 ---KLNILINNAAIAF-----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL 149 (202)
Q Consensus 78 ---~id~vi~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 149 (202)
++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++ .|+||++||..+ .+.+++..
T Consensus 84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-~~~~~~~~ 160 (269)
T 2h7i_A 84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-RAMPAYNW 160 (269)
T ss_dssp TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-SCCTTTHH
T ss_pred CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-cccCchHH
Confidence 8999999999875 467788999999999999999999999999999975 379999999876 67788899
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|++||+++++++++++.|++++||+||+|+||+++|++...
T Consensus 161 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~ 201 (269)
T 2h7i_A 161 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSA 201 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhc
Confidence 99999999999999999999999999999999999998653
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=245.22 Aligned_cols=185 Identities=30% Similarity=0.386 Sum_probs=170.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeE-EEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKV-TGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+||||++++++|+++|++|++++|++++++...+++ +.++ .++.+|++|.++++++++++.+ + +++
T Consensus 12 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~-~-~~i 86 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAEA-V-APV 86 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHHH-H-SCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHHh-h-CCC
Confidence 68999999999999999999999999999999998887777666 2356 8899999999999999999988 7 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC--hhhhhhHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAM 157 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~y~asK~a~ 157 (202)
|+||||||.....++.+.+.++|++.+++|+.|++.+++.++|.|++++.++||++||..+..+.++. ..|+++|+++
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~ 166 (254)
T 2wsb_A 87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAV 166 (254)
T ss_dssp CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHH
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHH
Confidence 99999999887777888899999999999999999999999999988778999999999988887877 8999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+.+++.++.|+.++||++++|+||+++|++...
T Consensus 167 ~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~ 199 (254)
T 2wsb_A 167 HQLTRALAAEWAGRGVRVNALAPGYVATEMTLK 199 (254)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHH
T ss_pred HHHHHHHHHHHhhcCeEEEEEEecccCchhhhc
Confidence 999999999999899999999999999998754
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=247.18 Aligned_cols=189 Identities=29% Similarity=0.414 Sum_probs=173.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+||||++++++|+++|++|++++|+ +++++...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i 86 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF-GGI 86 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-SSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-CCC
Confidence 689999999999999999999999999999999 888888888887767789999999999999999999999998 799
Q ss_pred cEEEEcCCC-CCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--C---CeEEEecCCCCcc-CCCCChhhhh
Q 028868 80 NILINNAAI-AFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--N---GSIVFISSVGGVR-GIPSVSLYGA 152 (202)
Q Consensus 80 d~vi~~ag~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~---~~iv~vsS~~~~~-~~~~~~~y~a 152 (202)
|+||||||. ....++.+.+.++|+..+++|+.+++.++++++|.|.+++ . ++||++||..+.. +.++...|++
T Consensus 87 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~ 166 (258)
T 3afn_B 87 DVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGA 166 (258)
T ss_dssp SEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHHH
T ss_pred CEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHHH
Confidence 999999997 5666777889999999999999999999999999997543 2 8999999998887 7888999999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
||++++.+++.++.|+.++||++++|+||+++|++...
T Consensus 167 sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~ 204 (258)
T 3afn_B 167 AKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD 204 (258)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT
T ss_pred HHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccc
Confidence 99999999999999999899999999999999998764
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=251.12 Aligned_cols=182 Identities=23% Similarity=0.242 Sum_probs=163.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+ +...+.++..+ |.++++++++++.+.+ +++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~-g~iD 74 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAY-GQVD 74 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHH-SCCC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999888776655 55445555443 6677888999998888 7999
Q ss_pred EEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.. ...++.+.+.++|+..+++|+.|++.++++++|+|++++.++||++||..+..+.++...|++||++++.
T Consensus 75 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 154 (254)
T 1zmt_A 75 VLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACT 154 (254)
T ss_dssp EEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHH
Confidence 999999987 6677888999999999999999999999999999988778999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcc---------cCCCcc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVI---------KTSMIK 189 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v---------~t~~~~ 189 (202)
++++++.|++++||+||+|+||++ +|++..
T Consensus 155 ~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~ 193 (254)
T 1zmt_A 155 LANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWK 193 (254)
T ss_dssp HHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHT
T ss_pred HHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccc
Confidence 999999999999999999999999 777654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-38 Score=245.63 Aligned_cols=189 Identities=25% Similarity=0.372 Sum_probs=172.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+.+..+...+++.. ..++.++.+|++|.++++++++++.+.+ +++|
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id 94 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS-PDVISFVHCDVTKDEDVRNLVDTTIAKH-GKLD 94 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC-CCceEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 6899999999999999999999999999999998877776666633 2368999999999999999999999998 7899
Q ss_pred EEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC-CChhhhhhHHHH
Q 028868 81 ILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-SVSLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-~~~~y~asK~a~ 157 (202)
+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|.+++.++||++||..+..+.+ +...|+++|+++
T Consensus 95 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~ 174 (278)
T 2bgk_A 95 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV 174 (278)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHH
T ss_pred EEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHHH
Confidence 9999999764 2567788999999999999999999999999999887789999999999988887 888999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+.+++.++.|+.+.||++++|+||++.|++....
T Consensus 175 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 208 (278)
T 2bgk_A 175 LGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDV 208 (278)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTS
T ss_pred HHHHHHHHHHHhhcCcEEEEEEeceecchhhhhh
Confidence 9999999999999999999999999999987643
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=248.49 Aligned_cols=187 Identities=28% Similarity=0.398 Sum_probs=170.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+.++.+...+++...+.++.++.+|++|.++++++++++.+.+ +++|
T Consensus 35 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~id 113 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF-GTID 113 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence 689999999999999999999999999999999887777776666556789999999999999999999999998 7999
Q ss_pred EEEEcCCCCCC-CCCC-CCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--CCCChhhhhhHHH
Q 028868 81 ILINNAAIAFV-KPTV-DITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGA 156 (202)
Q Consensus 81 ~vi~~ag~~~~-~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~y~asK~a 156 (202)
+||||||.... .++. +.+.++|++.+++|+.|++.+++.++|.|++++.++||++||..+..+ .++...|+++|++
T Consensus 114 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a 193 (279)
T 3ctm_A 114 VFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAA 193 (279)
T ss_dssp EEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHHHH
T ss_pred EEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHHHH
Confidence 99999998765 5666 788999999999999999999999999998877899999999998888 7888999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.++++++.|+.+.| ++++|+||+++|++..
T Consensus 194 ~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~ 225 (279)
T 3ctm_A 194 CTHLAKSLAIEWAPFA-RVNTISPGYIDTDITD 225 (279)
T ss_dssp HHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTS
T ss_pred HHHHHHHHHHHhcccC-CEEEEeccCCcccccc
Confidence 9999999999999889 9999999999999875
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=260.50 Aligned_cols=187 Identities=21% Similarity=0.270 Sum_probs=162.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH---HHHHH---hcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR---LHEWK---NKGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~---~~~~~---~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++.. .+.+. ..+.++.++.+|++|.++++++++++.
T Consensus 3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~-- 80 (327)
T 1jtv_A 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT-- 80 (327)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT--
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh--
Confidence 6899999999999999999999999988887765443333 32222 124578999999999999999999873
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+ +++|+||||||+....++.+.+.++|++++++|+.|++.++++++|+|++++.++||++||.++..+.++...|++||
T Consensus 81 ~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK 159 (327)
T 1jtv_A 81 E-GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK 159 (327)
T ss_dssp T-SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred c-CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHH
Confidence 4 689999999998877788889999999999999999999999999999877789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++++.|+++++.|+.+.||+|++|+||+|+|+|...
T Consensus 160 ~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~ 195 (327)
T 1jtv_A 160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEK 195 (327)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhh
Confidence 999999999999999999999999999999999764
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-38 Score=248.56 Aligned_cols=188 Identities=25% Similarity=0.365 Sum_probs=172.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+||||++++++|+++|++|++++|++++++...+++... +.++.++.+|++|.++++++++++.+.+ +++
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i 105 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-GHP 105 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT-CSC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999998888888877655 6679999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHh-cCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|+||||||.....++.+.+.++|+..+++|+.+++.+++.++|.|. +++.++||++||..+..+.++...|++||++++
T Consensus 106 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 185 (302)
T 1w6u_A 106 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVE 185 (302)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHHHH
Confidence 9999999987777778889999999999999999999999999997 445689999999999999899999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCC-Ccc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTS-MIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~-~~~ 189 (202)
.+++.++.++.++||++++|+||+++|+ +..
T Consensus 186 ~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~ 217 (302)
T 1w6u_A 186 AMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFS 217 (302)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCC-----
T ss_pred HHHHHHHHHhhhcCcEEEEEeeccCCCcchhh
Confidence 9999999999999999999999999998 443
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-39 Score=262.61 Aligned_cols=191 Identities=18% Similarity=0.142 Sum_probs=164.9
Q ss_pred CEEEEecCCCchHHHHHHHHHH-CCCEEEEEeCChhHHH------------HHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELD------------ARLHEWKNKGFKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~-~g~~Vi~~~r~~~~~~------------~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~ 67 (202)
|++|||||++|||+++|+.|++ .|++|++++|+.+.++ .+.+++...+..+..+.+|++++++++++
T Consensus 62 KvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~~~ 141 (422)
T 3s8m_A 62 KKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARAQV 141 (422)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHHHH
Confidence 7899999999999999999999 9999999998765432 23355566678899999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHHhHhH
Q 028868 68 IETVTSIFQGKLNILINNAAIA-------------FVKPT---------------------VDITAEDMSTVSSTNFESV 113 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~ 113 (202)
++.+.+.++|+||+||||||.. ...++ .+.+.++|+.++++|..+.
T Consensus 142 v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~ 221 (422)
T 3s8m_A 142 IELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQD 221 (422)
T ss_dssp HHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred HHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhchhH
Confidence 9999999845899999999972 23344 3679999999999999998
Q ss_pred H-HHHHHHhHH-HhcCCCCeEEEecCCCCccCCCCC--hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 114 F-HLSQLAHPL-FKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 114 ~-~~~~~~~~~-~~~~~~~~iv~vsS~~~~~~~~~~--~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+ .+++.+.+. |.+ +.|+||++||.++..+.|.+ +.|++||+++.+|+++|+.|+++.|||||+|+||+|+|++..
T Consensus 222 ~~~~~~a~~~~~m~~-~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~ 300 (422)
T 3s8m_A 222 WELWIDALEGAGVLA-DGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASA 300 (422)
T ss_dssp HHHHHHHHHHTTCEE-EEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG
T ss_pred HHHHHHHHHHHHHhh-CCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhh
Confidence 7 788887653 443 36899999999999988877 999999999999999999999999999999999999999987
Q ss_pred chh
Q 028868 190 PFE 192 (202)
Q Consensus 190 ~~~ 192 (202)
..+
T Consensus 301 ~ip 303 (422)
T 3s8m_A 301 AIP 303 (422)
T ss_dssp GST
T ss_pred cCC
Confidence 654
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=245.32 Aligned_cols=190 Identities=32% Similarity=0.422 Sum_probs=169.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||++++++|+++|++|++++|+.++.....+++.+ .+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~i 93 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-GPI 93 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS-CSE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence 5799999999999999999999999999999977666655555543 25678999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCC-------Chhhh
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPS-------VSLYG 151 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~-------~~~y~ 151 (202)
|+||||||.....++.+.+.++|+..+++|+.+++.++++++|.|.+++ .++||++||..+..+.+. ...|+
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~ 173 (265)
T 1h5q_A 94 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN 173 (265)
T ss_dssp EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHH
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccH
Confidence 9999999988777788889999999999999999999999999997654 489999999887766542 78999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++|++++.+++.++.|+.+.||++++|+||+++|++....
T Consensus 174 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 213 (265)
T 1h5q_A 174 SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM 213 (265)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc
Confidence 9999999999999999999999999999999999987653
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=245.49 Aligned_cols=186 Identities=25% Similarity=0.312 Sum_probs=169.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+||||++++++|+++|++|++++|++++++...+++.+.+. ++.++.+|++|.++++++++++.+.+ +++
T Consensus 29 k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g~i 107 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-GGL 107 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-TSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence 6899999999999999999999999999999999998888877766554 78999999999999999999999998 799
Q ss_pred cEEEEc-CCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINN-AAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~-ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++||| +|... .+..+.+.++++..+++|+.|++.++++++|+|+++ .++||++||.++..+.++...|++||++++
T Consensus 108 D~li~naag~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 185 (286)
T 1xu9_A 108 DMLILNHITNTS-LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALD 185 (286)
T ss_dssp SEEEECCCCCCC-CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCccCCC-CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHHHHHH
Confidence 999999 56543 355567899999999999999999999999999765 589999999999999999999999999999
Q ss_pred HHHHHHHHHH--ccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEW--AKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~--~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.++++++.|+ ...||++++|+||+++|++..
T Consensus 186 ~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~ 218 (286)
T 1xu9_A 186 GFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM 218 (286)
T ss_dssp HHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH
T ss_pred HHHHHHHHHHhhcCCCeEEEEeecCccCChhHH
Confidence 9999999999 567999999999999999864
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=273.04 Aligned_cols=184 Identities=29% Similarity=0.424 Sum_probs=164.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++.++.. ++...+++.+.+.++..+.+|++ ++.+++++++.+++ ++||
T Consensus 323 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~-G~iD 397 (604)
T 2et6_A 323 KVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY-GTID 397 (604)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH-SCCC
T ss_pred CeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc-CCCC
Confidence 6899999999999999999999999999998632 34556666666777888888884 45677888888888 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||+....++.+++.++|+.++++|+.|++.++++++|+|++++.|+||++||.++..+.++...|++||+++.+|
T Consensus 398 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~l 477 (604)
T 2et6_A 398 ILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGL 477 (604)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHH
Confidence 99999999877888999999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++|+.|++++||+||+|+||+ +|+|...
T Consensus 478 t~~la~El~~~gIrVn~v~PG~-~T~m~~~ 506 (604)
T 2et6_A 478 SKTMAIEGAKNNIKVNIVAPHA-ETAMTLS 506 (604)
T ss_dssp HHHHHHHHGGGTEEEEEEEECC-CCCC---
T ss_pred HHHHHHHhCccCeEEEEEcCCC-CCccccc
Confidence 9999999999999999999995 9998764
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=255.64 Aligned_cols=190 Identities=15% Similarity=0.055 Sum_probs=165.3
Q ss_pred CEEEEecCCCchHHHHHHHHHH-CCCEEEEEeCChhHH------------HHHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIEL------------DARLHEWKNKGFKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~-~g~~Vi~~~r~~~~~------------~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~ 67 (202)
|++|||||++|||+++|+.|++ .|++|++++|+.+.. +...+++...+..+..+.+|++++++++++
T Consensus 48 KvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~~~ 127 (405)
T 3zu3_A 48 KRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQLT 127 (405)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 7899999999999999999999 999999998875432 123335556677899999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHHhHhH
Q 028868 68 IETVTSIFQGKLNILINNAAIA-------------FVKPT---------------------VDITAEDMSTVSSTNFESV 113 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~~ 113 (202)
++++.+.| +++|+||||||.. ..+++ .+.+.++|+.++++|..+.
T Consensus 128 v~~i~~~~-G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~ 206 (405)
T 3zu3_A 128 IDAIKQDL-GQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGED 206 (405)
T ss_dssp HHHHHHHT-SCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred HHHHHHHc-CCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhH
Confidence 99999999 7999999999974 23454 6789999999999999999
Q ss_pred H-HHHHHHhH-HHhcCCCCeEEEecCCCCccCCCCC--hhhhhhHHHHHHHHHHHHHHHccC-CcEEEEeeCCcccCCCc
Q 028868 114 F-HLSQLAHP-LFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAMNQLTKNLACEWAKD-NIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 114 ~-~~~~~~~~-~~~~~~~~~iv~vsS~~~~~~~~~~--~~y~asK~a~~~~~~~la~e~~~~-gi~v~~v~pG~v~t~~~ 188 (202)
+ .+++.+.+ .|.+ ++|+||++||..+..+.|.+ +.|++||+++.+++|+|+.|+++. |||||+|+||++.|++.
T Consensus 207 ~~~~~~~~~~~~m~~-~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s 285 (405)
T 3zu3_A 207 WQMWIDALLDAGVLA-EGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQAS 285 (405)
T ss_dssp HHHHHHHHHHHTCEE-EEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHH
T ss_pred HHHHHHHHHHHhhhh-CCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchh
Confidence 8 78887764 4544 36899999999999999988 999999999999999999999999 99999999999999987
Q ss_pred cchh
Q 028868 189 KPFE 192 (202)
Q Consensus 189 ~~~~ 192 (202)
...+
T Consensus 286 ~~ip 289 (405)
T 3zu3_A 286 SAIP 289 (405)
T ss_dssp HTST
T ss_pred hcCC
Confidence 6544
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-38 Score=242.38 Aligned_cols=186 Identities=24% Similarity=0.274 Sum_probs=162.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG- 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~- 77 (202)
|++|||||++|||++++++|+++| ++|++++|+.++++.+.+ + .+.++.++.+|++++++++++++++.+.+ +
T Consensus 4 k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~ 79 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS-I--KDSRVHVLPLTVTCDKSLDTFVSKVGEIV-GS 79 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT-C--CCTTEEEEECCTTCHHHHHHHHHHHHHHH-GG
T ss_pred CEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh-c--cCCceEEEEeecCCHHHHHHHHHHHHHhc-CC
Confidence 689999999999999999999999 999999999877654422 1 25578999999999999999999999998 5
Q ss_pred -CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC------C-----CCeEEEecCCCCccCC
Q 028868 78 -KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------G-----NGSIVFISSVGGVRGI 144 (202)
Q Consensus 78 -~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~~~iv~vsS~~~~~~~ 144 (202)
++|+||||||... ..++.+.+.++++..+++|+.+++.++++++|+|.++ + .++||++||..+..+.
T Consensus 80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 159 (250)
T 1yo6_A 80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITD 159 (250)
T ss_dssp GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTT
T ss_pred CCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCC
Confidence 8999999999876 6778888999999999999999999999999999875 4 7899999999888776
Q ss_pred -------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 145 -------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 145 -------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++...|++||++++.++++++.|+.+.||++++|+||+++|++...
T Consensus 160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 212 (250)
T 1yo6_A 160 NTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK 212 (250)
T ss_dssp CCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred cccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC
Confidence 6788999999999999999999999899999999999999999764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=274.17 Aligned_cols=185 Identities=28% Similarity=0.374 Sum_probs=167.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh---------hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---------IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~---------~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
|++|||||++|||+++|++|+++|++|++.+|+. +.++...+++...+..+. +|++|.++++++++++
T Consensus 9 kvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~---~d~~d~~~~~~~v~~~ 85 (604)
T 2et6_A 9 KVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAV---ADYNNVLDGDKIVETA 85 (604)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEE---EECCCTTCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEE---EEcCCHHHHHHHHHHH
Confidence 6899999999999999999999999999998765 567777777776665543 5888888889999999
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhh
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG 151 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~ 151 (202)
.+.| ++||+||||||+....++.+.+.++|+.++++|+.|++.++|+++|+|++++.|+||++||.++..+.++...|+
T Consensus 86 ~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~ 164 (604)
T 2et6_A 86 VKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYA 164 (604)
T ss_dssp HHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHH
T ss_pred HHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHH
Confidence 9999 799999999999877888999999999999999999999999999999887789999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+||+|+.+|+++|+.|++++||+||+|+|| ++|+|...
T Consensus 165 asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~ 202 (604)
T 2et6_A 165 SAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTES 202 (604)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHT
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccc
Confidence 999999999999999999999999999998 68887543
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-38 Score=251.78 Aligned_cols=185 Identities=29% Similarity=0.400 Sum_probs=168.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE---------eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC---------SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~---------~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
|++|||||++|||+++|++|+++|++|++. +|+.++++...+++...+..+ .+|+++.++++++++++
T Consensus 10 k~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~~~~~~ 86 (319)
T 1gz6_A 10 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEKLVKTA 86 (319)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHHHHHHH
Confidence 689999999999999999999999999996 457778888888887665543 47999999999999999
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhh
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG 151 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~ 151 (202)
.+.+ +++|+||||||+....++.+.+.++|+..+++|+.|++.++++++|+|++++.++||++||.++..+.++...|+
T Consensus 87 ~~~~-g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~ 165 (319)
T 1gz6_A 87 LDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS 165 (319)
T ss_dssp HHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred HHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHH
Confidence 9998 799999999998877677888999999999999999999999999999887789999999998888888999999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+||++++.|++.++.|+.+.||+||+|+||++ |++...
T Consensus 166 aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~ 203 (319)
T 1gz6_A 166 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTET 203 (319)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGG
T ss_pred HHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccc
Confidence 99999999999999999999999999999998 887654
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=262.93 Aligned_cols=187 Identities=28% Similarity=0.321 Sum_probs=164.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|+.. .++...+++ .+.++.+|++|.++++++++++.+.++++
T Consensus 214 k~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~ 288 (454)
T 3u0b_A 214 KVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHVTEHHGGK 288 (454)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHHHHHSTTC
T ss_pred CEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHHcCCC
Confidence 68999999999999999999999999999998643 233333222 25688999999999999999999998546
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
||+||||||+....++.+.+.++|+.++++|+.|++++.+++.|.|.+++.++||++||.++..+.+++..|+++|++++
T Consensus 289 id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~ 368 (454)
T 3u0b_A 289 VDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMI 368 (454)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred ceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHH
Confidence 99999999998888889999999999999999999999999999998877899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+++++.|+.++||+||+|+||+++|+|....+
T Consensus 369 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~ 402 (454)
T 3u0b_A 369 GLAEALAPVLADKGITINAVAPGFIETKMTEAIP 402 (454)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECSBCC-------
T ss_pred HHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcc
Confidence 9999999999999999999999999999987543
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=246.05 Aligned_cols=177 Identities=28% Similarity=0.299 Sum_probs=160.7
Q ss_pred CEEEEecCCCchHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|++ .|++|++.+|+++. ....+.++.+|++|.++++++++.+. + +++
T Consensus 5 k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~-~~i 71 (244)
T 4e4y_A 5 ANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--N-VSF 71 (244)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--T-CCE
T ss_pred CeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--h-CCC
Confidence 5899999999999999999999 78899999988641 12247889999999999999996554 4 689
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||||+....++.+.+.++|++.+++|+.|++.++++++|+|+++ ++||++||..+..+.++...|++||+++++
T Consensus 72 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~ 149 (244)
T 4e4y_A 72 DGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQCFIAKPNSFAYTLSKGAIAQ 149 (244)
T ss_dssp EEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGGGTCCCTTBHHHHHHHHHHHH
T ss_pred CEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHHHccCCCCCchhHHHHHHHHH
Confidence 999999999888888999999999999999999999999999999764 899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+++++.|++++||+||+|+||+++|++.....
T Consensus 150 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~ 182 (244)
T 4e4y_A 150 MTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLI 182 (244)
T ss_dssp HHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHH
T ss_pred HHHHHHHHHHHcCeEEEEEecCccCchhhHHHH
Confidence 999999999999999999999999999876543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=246.18 Aligned_cols=178 Identities=19% Similarity=0.164 Sum_probs=162.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
|++|||||++|||++++++|+++|++|++++|++++.. ....++.+|++|+++++++++++.+.++ +++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~i 77 (241)
T 1dhr_A 8 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 77 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 68999999999999999999999999999999876532 1467788999999999999999999884 489
Q ss_pred cEEEEcCCCCCCCCC-CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPT-VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|+||||||.....++ .+.+.++|+..+++|+.+++.++++++|+|++ .|+||++||.++..+.++...|++||++++
T Consensus 78 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 155 (241)
T 1dhr_A 78 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVH 155 (241)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred CEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHHHccCCCCchHHHHHHHHHH
Confidence 999999998776677 77889999999999999999999999999975 489999999999999999999999999999
Q ss_pred HHHHHHHHHHc--cCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.++++++.|+. ++||+||+|+||+++|++...
T Consensus 156 ~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~ 189 (241)
T 1dhr_A 156 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRK 189 (241)
T ss_dssp HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHH
T ss_pred HHHHHHHHHhccCCCCeEEEEEecCcccCccccc
Confidence 99999999998 899999999999999998764
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=245.24 Aligned_cols=185 Identities=34% Similarity=0.487 Sum_probs=170.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-----KGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||++|||+++|++|+++|++|++++|+.++++...+++.. .+.++.++.+|++|.++++++++++.+.+
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 98 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 98 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999999999999988888888765 35679999999999999999999999998
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
+++|+||||||.....++.+.+.++|+..+++|+.|++.++++++|.+.++..++||++||.. ..+.++...|+++|+
T Consensus 99 -g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~sK~ 176 (303)
T 1yxm_A 99 -GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAARA 176 (303)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHHHH
T ss_pred -CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHHHH
Confidence 799999999998766777888999999999999999999999999965444468999999988 788888999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
++.++++.++.|+.+.||++++|+||+++|++
T Consensus 177 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~ 208 (303)
T 1yxm_A 177 GVYNLTKSLALEWACSGIRINCVAPGVIYSQT 208 (303)
T ss_dssp HHHHHHHHHHHHTGGGTEEEEEEEECSBCCTG
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCCcccch
Confidence 99999999999999899999999999999995
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=244.35 Aligned_cols=181 Identities=25% Similarity=0.339 Sum_probs=163.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++.+. +.++.++.+|++|+++++++++.+.+.+ ++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 86 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF-GR 86 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc-CC
Confidence 68999999999999999999999999999999998887777776543 4468899999999999999999999999 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC---CCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
+|+||||||... .++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|++||+
T Consensus 87 id~lv~~Ag~~~--------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~ 158 (267)
T 2gdz_A 87 LDILVNNAGVNN--------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKH 158 (267)
T ss_dssp CCEEEECCCCCC--------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCC--------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHH
Confidence 999999999742 356889999999999999999999997653 689999999999999999999999999
Q ss_pred HHHHHHHHH--HHHHccCCcEEEEeeCCcccCCCccc
Q 028868 156 AMNQLTKNL--ACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 156 a~~~~~~~l--a~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.+++++ +.|+.+.||+||+|+||+++|++...
T Consensus 159 a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~ 195 (267)
T 2gdz_A 159 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES 195 (267)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG
T ss_pred HHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc
Confidence 999999985 68898899999999999999998654
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-39 Score=260.66 Aligned_cols=189 Identities=18% Similarity=0.175 Sum_probs=164.1
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChh---------HHHHHHHHHHh---cCCeEEEEEecCCCH--H--
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQI---------ELDARLHEWKN---KGFKVTGSVCDLSSR--E-- 62 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~---------~~~~~~~~~~~---~~~~v~~~~~Dv~~~--~-- 62 (202)
|++|||||++ |||+++|++|+++|++|+++++++. +++........ ....+.++.+|+++. +
T Consensus 3 k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~ 82 (329)
T 3lt0_A 3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI 82 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGC
T ss_pred cEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhh
Confidence 7899999986 9999999999999999998877652 22221111111 123478889999988 8
Q ss_pred ----------------HHHHHHHHHHHHhCCCccEEEEcCCCC--CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHH
Q 028868 63 ----------------QREKLIETVTSIFQGKLNILINNAAIA--FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124 (202)
Q Consensus 63 ----------------~i~~~~~~~~~~~~~~id~vi~~ag~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 124 (202)
+++++++++.+++ +++|+||||||+. ...++.+.+.++|++++++|+.|++.++++++|+|
T Consensus 83 ~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~-g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 83 DEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CHHHHTSHHHHTCCSCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhcccccccccCHHHHHHHHHHHHHhc-CCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 9999999999999 7999999999974 46778889999999999999999999999999999
Q ss_pred hcCCCCeEEEecCCCCccCCCCCh-hhhhhHHHHHHHHHHHHHHHcc-CCcEEEEeeCCcccCCCccchh
Q 028868 125 KASGNGSIVFISSVGGVRGIPSVS-LYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 125 ~~~~~~~iv~vsS~~~~~~~~~~~-~y~asK~a~~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++ |+||++||.++..+.|+.. .|++||+++.+|+++|+.|+.+ +||+||+|+||+|+|+|.....
T Consensus 162 ~~~--g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~ 229 (329)
T 3lt0_A 162 KPQ--SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAIN 229 (329)
T ss_dssp EEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC
T ss_pred hhC--CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhh
Confidence 875 8999999999999999986 9999999999999999999988 8999999999999999987653
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-37 Score=242.22 Aligned_cols=190 Identities=24% Similarity=0.286 Sum_probs=168.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC---CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g---~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++| ++|++++|+.++.+.+ +++...+.++.++.+|++|.++++++++++.+.++.
T Consensus 22 k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 100 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 100 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred CEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 689999999999999999999999 9999999998765543 444444567999999999999999999999999832
Q ss_pred -CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC------C-----CCeEEEecCCCCccCC
Q 028868 78 -KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------G-----NGSIVFISSVGGVRGI 144 (202)
Q Consensus 78 -~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~-----~~~iv~vsS~~~~~~~ 144 (202)
++|+||||||... ..++.+.+.++++..+++|+.+++.++++++|+|.++ + .++||++||..+..+.
T Consensus 101 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 180 (267)
T 1sny_A 101 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQG 180 (267)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTT
T ss_pred CCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccC
Confidence 7999999999876 6677888999999999999999999999999999865 3 5899999999887765
Q ss_pred C---CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 145 P---SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 145 ~---~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+ +...|+++|++++.+++.++.|+.+.||++++|+||+|+|+|....
T Consensus 181 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~ 230 (267)
T 1sny_A 181 NTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS 230 (267)
T ss_dssp CCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCCC
Confidence 3 7788999999999999999999999999999999999999998643
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=242.10 Aligned_cols=186 Identities=27% Similarity=0.387 Sum_probs=172.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+||||++++++|+++|++|++++| ++++++...+++...+.++.++.+|++|+++++++++++.+++ +++
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~ 100 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-GGL 100 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence 68999999999999999999999999999999 7777887777877767789999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~ 158 (202)
|++|||||.....++.+.+.++|+..+++|+.+++.++++++|.|++ .++||++||..+. .+.++...|+++|++++
T Consensus 101 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~ 178 (274)
T 1ja9_A 101 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR--GGRIILTSSIAAVMTGIPNHALYAGSKAAVE 178 (274)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE--EEEEEEECCGGGTCCSCCSCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCEEEEEcChHhccCCCCCCchHHHHHHHHH
Confidence 99999999887777778899999999999999999999999999973 3899999999888 77888999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.+++.++.|+.++||++++|+||++.|++..
T Consensus 179 ~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~ 209 (274)
T 1ja9_A 179 GFCRAFAVDCGAKGVTVNCIAPGGVKTDMFD 209 (274)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBSSHHHH
T ss_pred HHHHHHHHHhhhcCeEEEEEeeCcccccchh
Confidence 9999999999989999999999999999865
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-38 Score=242.90 Aligned_cols=178 Identities=20% Similarity=0.172 Sum_probs=162.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
|++|||||++|||++++++|+++|++|++++|++++.. ....++.+|++|.++++++++++.+.++ +++
T Consensus 4 k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~i 73 (236)
T 1ooe_A 4 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV 73 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCC
Confidence 58999999999999999999999999999999876532 1356788999999999999999999884 489
Q ss_pred cEEEEcCCCCCCCCC-CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPT-VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|+||||||.....++ .+.+.++|+..+++|+.+++.++++++|+|++ .++||++||..+..+.++...|++||++++
T Consensus 74 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 151 (236)
T 1ooe_A 74 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVH 151 (236)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchhhccCCCCcHHHHHHHHHHH
Confidence 999999998766676 67889999999999999999999999999965 489999999999999999999999999999
Q ss_pred HHHHHHHHHHc--cCCcEEEEeeCCcccCCCccc
Q 028868 159 QLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 159 ~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++++.|+. ++||+|++|+||+++|++...
T Consensus 152 ~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~ 185 (236)
T 1ooe_A 152 HLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK 185 (236)
T ss_dssp HHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH
T ss_pred HHHHHHHHHhcccCCCeEEEEEecCcccCcchhh
Confidence 99999999998 899999999999999998764
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=236.55 Aligned_cols=181 Identities=35% Similarity=0.498 Sum_probs=163.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++...+++. ...++.+|++|+++++++++ .+ +++|
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----~~-~~id 78 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV-GPVD 78 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC-CCCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----Hc-CCCC
Confidence 689999999999999999999999999999999887776655432 24566999999999988876 34 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|+..+++|+.+++.+++++.|.|.+++ .++||++||..+..+.++...|++||++++.
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 158 (244)
T 3d3w_A 79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDM 158 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHH
Confidence 999999988777788889999999999999999999999999998765 7899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++.++.|+++.||++++|+||+++|++...
T Consensus 159 ~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~ 189 (244)
T 3d3w_A 159 LTKVMALELGPHKIRVNAVNPTVVMTSMGQA 189 (244)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBTTTTHHH
T ss_pred HHHHHHHHhcccCeEEEEEEeccccccchhh
Confidence 9999999999899999999999999998653
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-38 Score=243.24 Aligned_cols=177 Identities=18% Similarity=0.173 Sum_probs=161.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++.. -..+.+|++|.++++++++++.+.+ +++|
T Consensus 23 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~------------~~~~~~d~~d~~~v~~~~~~~~~~~-g~iD 89 (251)
T 3orf_A 23 KNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA------------DHSFTIKDSGEEEIKSVIEKINSKS-IKVD 89 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------SEEEECSCSSHHHHHHHHHHHHTTT-CCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc------------ccceEEEeCCHHHHHHHHHHHHHHc-CCCC
Confidence 68999999999999999999999999999999976432 1356789999999999999999998 7999
Q ss_pred EEEEcCCCCCCCC-CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKP-TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....+ ..+.+.++|++.+++|+.|++.++++++|+|++ .|+||++||..+..+.++...|++||++++.
T Consensus 90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 167 (251)
T 3orf_A 90 TFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASAALNRTSGMIAYGATKAATHH 167 (251)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechhhccCCCCCchhHHHHHHHHH
Confidence 9999999876554 677889999999999999999999999999976 5899999999999999999999999999999
Q ss_pred HHHHHHHHHc--cCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++++++.|++ +.||+|++|+||+++|++.....
T Consensus 168 ~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~ 202 (251)
T 3orf_A 168 IIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYM 202 (251)
T ss_dssp HHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHC
T ss_pred HHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhc
Confidence 9999999986 88999999999999999876543
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=240.38 Aligned_cols=179 Identities=22% Similarity=0.301 Sum_probs=157.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCH-HHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSR-EQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~-~~i~~~~~~~~~~~~ 76 (202)
|+++||||++|||+++|++|+++|++ |++++|+++. ...+++.+. +.++.++.+|++|+ ++++++++++.+.+
T Consensus 6 k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 82 (254)
T 1sby_A 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL- 82 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc-
Confidence 68999999999999999999999996 9999998632 122233222 45789999999998 99999999999998
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC---CCeEEEecCCCCccCCCCChhhhhh
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+++|+||||||.. +.++|++.+++|+.|++.++++++|+|.+++ .++||++||.++..+.++...|++|
T Consensus 83 g~id~lv~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 154 (254)
T 1sby_A 83 KTVDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSAS 154 (254)
T ss_dssp SCCCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHH
T ss_pred CCCCEEEECCccC--------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHH
Confidence 7899999999973 3467899999999999999999999997653 5899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
|++++.++++++.++++.||+|++|+||+++|++...
T Consensus 155 K~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~ 191 (254)
T 1sby_A 155 KAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHT 191 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHS
T ss_pred HHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccc
Confidence 9999999999999998889999999999999998754
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-37 Score=236.26 Aligned_cols=163 Identities=28% Similarity=0.319 Sum_probs=151.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.+ +|++|+++++++++++ +++|
T Consensus 7 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~-----g~id 61 (223)
T 3uce_A 7 TVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI-----GAFD 61 (223)
T ss_dssp EEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH-----CSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh-----CCCC
Confidence 57999999999999999999999999999999865 7999999999988764 7899
Q ss_pred EEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.. ...++.+.+.++|+..+++|+.+++.++++++|+|++ .|+||++||..+..+.++...|+++|++++.
T Consensus 62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~ 139 (223)
T 3uce_A 62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGMLSRKVVANTYVKAAINAAIEA 139 (223)
T ss_dssp EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchhhccCCCCchHHHHHHHHHHH
Confidence 999999987 6678889999999999999999999999999999976 5899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++++++.|+++ |+||+|+||+++|++.....
T Consensus 140 ~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~ 170 (223)
T 3uce_A 140 TTKVLAKELAP--IRVNAISPGLTKTEAYKGMN 170 (223)
T ss_dssp HHHHHHHHHTT--SEEEEEEECSBCSGGGTTSC
T ss_pred HHHHHHHhhcC--cEEEEEEeCCCcchhhhhcc
Confidence 99999999986 99999999999999886543
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-37 Score=245.83 Aligned_cols=178 Identities=25% Similarity=0.264 Sum_probs=155.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++ +.++.++.+|++|.++++++++++ +++|
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~-----~~iD 88 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV-----SGAD 88 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC-----CCEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc-----CCCC
Confidence 68999999999999999999999999999999998887766554 568999999999999999988875 5899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-------------CCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------IPSV 147 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------~~~~ 147 (202)
+||||||+.. +..+.+.++|+..+++|+.|++.++++++|+|.+ +||++||.++..+ .++.
T Consensus 89 ~lv~nAg~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~~~~~~~ 162 (291)
T 3rd5_A 89 VLINNAGIMA--VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRSRRYSPW 162 (291)
T ss_dssp EEEECCCCCS--CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSSSCCCHH
T ss_pred EEEECCcCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccccccCCCCc
Confidence 9999999864 3355678899999999999999999999999964 8999999987754 3456
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCC--cEEEEeeCCcccCCCccchh
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDN--IRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~g--i~v~~v~pG~v~t~~~~~~~ 192 (202)
..|++||++++.+++.++.|+++.| |++|+|+||+|+|++.+...
T Consensus 163 ~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~ 209 (291)
T 3rd5_A 163 LAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASG 209 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccc
Confidence 7899999999999999999999887 99999999999999987653
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=243.21 Aligned_cols=184 Identities=26% Similarity=0.266 Sum_probs=137.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|++ |++|++++|++++++...+ ..++.++.+|+++.++ .+.+.+..+.+ +++|
T Consensus 6 k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~-~~id 77 (245)
T 3e9n_A 6 KIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNL-DHVD 77 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTC-SCCS
T ss_pred CEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhc-CCCC
Confidence 6899999999999999999987 9999999999877765543 2358889999998876 34444444455 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|+..+++|+.|++.+++.++|.|++++ |+||++||..+..+.++...|++||++++.+
T Consensus 78 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~ 156 (245)
T 3e9n_A 78 TLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGPHPGNTIYAASKHALRGL 156 (245)
T ss_dssp EEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------CHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccCCCCchHHHHHHHHHHHH
Confidence 999999998777888889999999999999999999999999998764 8999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+++++.|+++.||+|++|+||+++|++......
T Consensus 157 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~ 189 (245)
T 3e9n_A 157 ADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD 189 (245)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCC----------
T ss_pred HHHHHHHhhhcCeEEEEEecCCccCchhhhhhh
Confidence 999999999999999999999999999876543
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=236.46 Aligned_cols=174 Identities=30% Similarity=0.359 Sum_probs=155.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++..+ ++ + .+.++ +|+ .++++++++++ .++|
T Consensus 20 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~---~-~~~~~-~D~--~~~~~~~~~~~-----~~iD 83 (249)
T 1o5i_A 20 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS---G-HRYVV-CDL--RKDLDLLFEKV-----KEVD 83 (249)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT---C-SEEEE-CCT--TTCHHHHHHHS-----CCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh---C-CeEEE-eeH--HHHHHHHHHHh-----cCCC
Confidence 68999999999999999999999999999999973322 22 2 46677 999 45666666654 3799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+||||||.....++.+.+.++|+..+++|+.|++.+++.++|.|++++.++||++||..+..+.++...|+++|++++.+
T Consensus 84 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 163 (249)
T 1o5i_A 84 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGF 163 (249)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHH
Confidence 99999998877778889999999999999999999999999999887789999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+++++.|+.+.||++|+|+||+++|++...
T Consensus 164 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~ 193 (249)
T 1o5i_A 164 LKTLSFEVAPYGITVNCVAPGWTETERVKE 193 (249)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCTTHHH
T ss_pred HHHHHHHhhhcCeEEEEEeeCCCccCcccc
Confidence 999999999999999999999999998753
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=233.54 Aligned_cols=180 Identities=36% Similarity=0.480 Sum_probs=162.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+||||++++++|+++|++|++++|++++++...+++ ..+.++.+|++|+++++++++ .+ +++|
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----~~-~~id 78 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI-GPVD 78 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC-CCCS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----Hc-CCCC
Confidence 68999999999999999999999999999999988776655442 135566999999999988877 34 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.....++.+.+.++|+..+++|+.+++.+++.+.|.|.+++ .++||++||..+..+.++...|++||++++.
T Consensus 79 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 158 (244)
T 1cyd_A 79 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTM 158 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence 999999988777788889999999999999999999999999998766 6899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++.++.+++++||++++|+||++.|++..
T Consensus 159 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~ 188 (244)
T 1cyd_A 159 LTKAMAMELGPHKIRVNSVNPTVVLTDMGK 188 (244)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBTTHHHH
T ss_pred HHHHHHHHhhhcCeEEEEEecCcccCcccc
Confidence 999999999989999999999999999765
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=236.94 Aligned_cols=186 Identities=29% Similarity=0.370 Sum_probs=164.3
Q ss_pred CEEEEecCCCchHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||++++++|++ +|++|++++|+.++.+...+++...+.++.++.+|++|.++++++++++.+.+ +++
T Consensus 5 k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g~i 83 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGL 83 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-CCC
Confidence 6899999999999999999999 99999999999988888888887767778999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCC-HHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC---------------
Q 028868 80 NILINNAAIAFVKPTVDIT-AEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--------------- 143 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--------------- 143 (202)
|+||||||...... .+.+ .++++..+++|+.|++.+++.++|+|++ .++||++||..+..+
T Consensus 84 d~li~~Ag~~~~~~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T 1wma_A 84 DVLVNNAGIAFKVA-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSE 160 (276)
T ss_dssp EEEEECCCCCCCTT-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCS
T ss_pred CEEEECCcccccCC-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHhhcccc
Confidence 99999999865433 2334 5899999999999999999999999875 479999999876532
Q ss_pred --------------------------CCCChhhhhhHHHHHHHHHHHHHHHcc----CCcEEEEeeCCcccCCCccc
Q 028868 144 --------------------------IPSVSLYGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 144 --------------------------~~~~~~y~asK~a~~~~~~~la~e~~~----~gi~v~~v~pG~v~t~~~~~ 190 (202)
..+...|++||++++.+++.++.++.+ .||+|++|+||+++|++...
T Consensus 161 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~ 237 (276)
T 1wma_A 161 TITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP 237 (276)
T ss_dssp SCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred ccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence 012378999999999999999999987 79999999999999999764
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=263.31 Aligned_cols=185 Identities=29% Similarity=0.370 Sum_probs=153.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC---------ChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR---------NQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r---------~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
|++|||||++|||+++|++|+++|++|++++| +.+.++...+++...+..+ .+|+++.++++++++++
T Consensus 20 k~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d~~~~~~~~~~~ 96 (613)
T 3oml_A 20 RVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNSVIDGAKVIETA 96 (613)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCCGGGHHHHHC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCCHHHHHHHHHHH
Confidence 78999999999999999999999999999988 6777888888887766544 37999999999999999
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhh
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG 151 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~ 151 (202)
.+.+ ++||+||||||+....++.+.+.++|+.++++|+.|++.++++++|+|++++.|+||++||.++..+.++...|+
T Consensus 97 ~~~~-g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~ 175 (613)
T 3oml_A 97 IKAF-GRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYT 175 (613)
T ss_dssp ---------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred HHHC-CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHH
Confidence 9998 799999999999888888899999999999999999999999999999988889999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+||+++.+|+++++.|+++.||+||+|+||++ |+|...
T Consensus 176 asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~ 213 (613)
T 3oml_A 176 AAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEG 213 (613)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CC
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhh
Confidence 99999999999999999999999999999975 666543
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=246.89 Aligned_cols=191 Identities=16% Similarity=0.091 Sum_probs=164.0
Q ss_pred CEEEEecCCCchHHH--HHHHHHHCCCEEEEEeCChhH------------HHHHHHHHHhcCCeEEEEEecCCCHHHHHH
Q 028868 1 MTALVTGGTRGIGHA--TVEELARFGAIVHTCSRNQIE------------LDARLHEWKNKGFKVTGSVCDLSSREQREK 66 (202)
Q Consensus 1 k~~lItGas~giG~a--~a~~l~~~g~~Vi~~~r~~~~------------~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~ 66 (202)
|++|||||++|||++ +++.|+++|++|++++|+.+. .+.+.+.+...+..+..+.+|+++.+++++
T Consensus 61 K~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~~ 140 (418)
T 4eue_A 61 KKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKDK 140 (418)
T ss_dssp SEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHHH
Confidence 789999999999999 999999999999999986543 234444455567789999999999999999
Q ss_pred HHHHHHHHhCCCccEEEEcCCCC-------------CCCCC---------------------CCCCHHHHHHHHHHHhHh
Q 028868 67 LIETVTSIFQGKLNILINNAAIA-------------FVKPT---------------------VDITAEDMSTVSSTNFES 112 (202)
Q Consensus 67 ~~~~~~~~~~~~id~vi~~ag~~-------------~~~~~---------------------~~~~~~~~~~~~~~n~~~ 112 (202)
+++++.+.+ ++||+||||||.. ..+++ .+.+.++|+..+++|..+
T Consensus 141 ~v~~i~~~~-G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~ 219 (418)
T 4eue_A 141 VIKYIKDEF-GKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGE 219 (418)
T ss_dssp HHHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHc-CCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHH
Confidence 999999998 7999999999974 22333 357999999999999998
Q ss_pred HH-HHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC--hhhhhhHHHHHHHHHHHHHHHcc-CCcEEEEeeCCcccCCCc
Q 028868 113 VF-HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV--SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 113 ~~-~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~--~~y~asK~a~~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~ 188 (202)
.+ .+++.+.+.+..++.|+||++||.++..+.|.+ +.|++||+++.+++++|+.|+++ .|||||+|+||+|+|++.
T Consensus 220 ~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s 299 (418)
T 4eue_A 220 DWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKAS 299 (418)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHH
T ss_pred HHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhh
Confidence 88 777777664433346899999999999999988 99999999999999999999999 899999999999999987
Q ss_pred cchh
Q 028868 189 KPFE 192 (202)
Q Consensus 189 ~~~~ 192 (202)
...+
T Consensus 300 ~~ip 303 (418)
T 4eue_A 300 AYIP 303 (418)
T ss_dssp HTST
T ss_pred hcCC
Confidence 6543
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-36 Score=242.80 Aligned_cols=188 Identities=23% Similarity=0.238 Sum_probs=130.2
Q ss_pred CEEEEecC--CCchHHHHHHHHHHCCCEEEEEeCCh-----------hHHH-----------HHHHHHHhcCCe---EEE
Q 028868 1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQ-----------IELD-----------ARLHEWKNKGFK---VTG 53 (202)
Q Consensus 1 k~~lItGa--s~giG~a~a~~l~~~g~~Vi~~~r~~-----------~~~~-----------~~~~~~~~~~~~---v~~ 53 (202)
|++||||| ++|||+++|++|+++|++|++++|++ ++++ ...+++.+.+.. ..+
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (319)
T 2ptg_A 10 KTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDKI 89 (319)
T ss_dssp CEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSEE
T ss_pred CEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccccc
Confidence 68999999 89999999999999999999998753 1221 122233222210 233
Q ss_pred EEec------------CCC--------HHHHHHHHHHHHHHhCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhH
Q 028868 54 SVCD------------LSS--------REQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFE 111 (202)
Q Consensus 54 ~~~D------------v~~--------~~~i~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~ 111 (202)
+.+| +++ +++++++++++.+.+ +++|+||||||+.. ..++.+.+.++|+..+++|+.
T Consensus 90 ~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~ 168 (319)
T 2ptg_A 90 YPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADV-GQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSY 168 (319)
T ss_dssp EECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHH-SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTH
T ss_pred ccccccccccccccchhcccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhH
Confidence 3333 333 448899999999998 79999999999763 567788999999999999999
Q ss_pred hHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCcEEEEeeCCcccCCCcc
Q 028868 112 SVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~y~asK~a~~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~ 189 (202)
|++.++++++|+|++ .|+||++||.++..+.++. ..|++||+++.+|+++++.|+++ +||+||+|+||+|+|+|..
T Consensus 169 g~~~l~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~ 246 (319)
T 2ptg_A 169 SFVSLLQHFLPLMKE--GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAAS 246 (319)
T ss_dssp HHHHHHHHHGGGEEE--EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-----
T ss_pred HHHHHHHHHHHHHhc--CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhh
Confidence 999999999999976 3899999999999988887 68999999999999999999985 8999999999999999876
Q ss_pred ch
Q 028868 190 PF 191 (202)
Q Consensus 190 ~~ 191 (202)
..
T Consensus 247 ~~ 248 (319)
T 2ptg_A 247 AI 248 (319)
T ss_dssp --
T ss_pred hc
Confidence 43
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=229.14 Aligned_cols=177 Identities=25% Similarity=0.268 Sum_probs=157.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|+++ . .++.++.+|++|+++++++++++ +.+ +++|
T Consensus 3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~-~~~d 68 (242)
T 1uay_A 3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEE-APLF 68 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHH-SCEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-Hhh-CCce
Confidence 68999999999999999999999999999999865 1 13578899999999999999999 777 6899
Q ss_pred EEEEcCCCCCCCCCCCC----CHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC---C---CeEEEecCCCCccCCCCChhh
Q 028868 81 ILINNAAIAFVKPTVDI----TAEDMSTVSSTNFESVFHLSQLAHPLFKASG---N---GSIVFISSVGGVRGIPSVSLY 150 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~---~~iv~vsS~~~~~~~~~~~~y 150 (202)
++|||||.....++.+. +.++|++.+++|+.+++.+++++.|.|.+++ . ++||++||..+..+.++...|
T Consensus 69 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y 148 (242)
T 1uay_A 69 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 148 (242)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred EEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchh
Confidence 99999998765555544 4459999999999999999999999998754 3 499999999999998999999
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+++|++++.+++.++.|+.++||++++|+||+++|++....
T Consensus 149 ~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~ 189 (242)
T 1uay_A 149 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL 189 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS
T ss_pred hHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc
Confidence 99999999999999999998999999999999999987543
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-36 Score=239.38 Aligned_cols=187 Identities=25% Similarity=0.278 Sum_probs=153.3
Q ss_pred CEEEEecC--CCchHHHHHHHHHHCCCEEEEEeCChhH------HH-HHHHHHHhc--CCe---EEEEEec---------
Q 028868 1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIE------LD-ARLHEWKNK--GFK---VTGSVCD--------- 57 (202)
Q Consensus 1 k~~lItGa--s~giG~a~a~~l~~~g~~Vi~~~r~~~~------~~-~~~~~~~~~--~~~---v~~~~~D--------- 57 (202)
|++||||| ++|||+++|++|+++|++|++++|++.. .. ...+++.+. +.. +.++.+|
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 89 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPEDV 89 (315)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTTSS
T ss_pred CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccchh
Confidence 68999999 8999999999999999999999986410 10 011111111 111 2333333
Q ss_pred ---CC--------CHHHHHHHHHHHHHHhCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHH
Q 028868 58 ---LS--------SREQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124 (202)
Q Consensus 58 ---v~--------~~~~i~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 124 (202)
++ |+++++++++++.+.+ +++|+||||||+.. ..++.+.+.++|+..+++|+.|++.++++++|+|
T Consensus 90 ~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m 168 (315)
T 2o2s_A 90 PQDIKDNKRYAGVDGYTIKEVAVKVKQDL-GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIM 168 (315)
T ss_dssp CHHHHTCGGGSSCCCCSHHHHHHHHHHHH-CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTE
T ss_pred hhhhhcccccccCCHHHHHHHHHHHHHhc-CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 33 2568999999999998 79999999999763 5677889999999999999999999999999999
Q ss_pred hcCCCCeEEEecCCCCccCCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCcEEEEeeCCcccCCCccc
Q 028868 125 KASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 125 ~~~~~~~iv~vsS~~~~~~~~~~-~~y~asK~a~~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~ 190 (202)
++ .|+||++||.++..+.++. ..|++||+++.+|+++++.|+++ +||+||+|+||+|+|+|...
T Consensus 169 ~~--~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~ 234 (315)
T 2o2s_A 169 NE--GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASA 234 (315)
T ss_dssp EE--EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHH
T ss_pred hc--CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhh
Confidence 76 3899999999999988887 58999999999999999999985 89999999999999998654
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-35 Score=232.10 Aligned_cols=186 Identities=22% Similarity=0.222 Sum_probs=153.1
Q ss_pred CEEEEecCC--CchHHHHHHHHHHCCCEEEEEeCChhHH-----------HHHHHHHHhcC--CeEEEEEec--------
Q 028868 1 MTALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIEL-----------DARLHEWKNKG--FKVTGSVCD-------- 57 (202)
Q Consensus 1 k~~lItGas--~giG~a~a~~l~~~g~~Vi~~~r~~~~~-----------~~~~~~~~~~~--~~v~~~~~D-------- 57 (202)
|++|||||+ +|||+++|++|+++|++|++++|++... +.. +++.... .....+.+|
T Consensus 9 k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d 87 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVFDNPED 87 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTCCSGGG
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceeccchhh
Confidence 689999999 9999999999999999999998764211 111 1111100 012333333
Q ss_pred CCC------------HHHHHHHHHHHHHHhCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHH
Q 028868 58 LSS------------REQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123 (202)
Q Consensus 58 v~~------------~~~i~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 123 (202)
+++ +++++++++++.+.+ +++|+||||||+.. ..++.+.+.++|++.+++|+.|++.++++++|+
T Consensus 88 v~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 166 (297)
T 1d7o_A 88 VPEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI 166 (297)
T ss_dssp SCHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhccccccccCHHHHHHHHHHHHHHc-CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 332 568999999999998 79999999999753 567788999999999999999999999999999
Q ss_pred HhcCCCCeEEEecCCCCccCCCCC-hhhhhhHHHHHHHHHHHHHHHcc-CCcEEEEeeCCcccCCCccc
Q 028868 124 FKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 124 ~~~~~~~~iv~vsS~~~~~~~~~~-~~y~asK~a~~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~~ 190 (202)
|++ .|+||++||.++..+.++. ..|++||+++++|+++++.|+++ .||+||+|+||+++|++...
T Consensus 167 m~~--~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~ 233 (297)
T 1d7o_A 167 MNP--GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA 233 (297)
T ss_dssp EEE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC
T ss_pred hcc--CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhh
Confidence 976 4899999999999988887 69999999999999999999985 79999999999999999764
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=229.70 Aligned_cols=167 Identities=20% Similarity=0.238 Sum_probs=138.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||++++++|+++|++|++++|++++++. . +.+|+++.++++++++++ + +++|
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~-~~~Dl~~~~~v~~~~~~~---~-~~id 64 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------D-LSTAEGRKQAIADVLAKC---S-KGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------C-TTSHHHHHHHHHHHHTTC---T-TCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------c-cccCCCCHHHHHHHHHHh---C-CCCC
Confidence 689999999999999999999999999999998754321 1 568999999998888743 2 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-------------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV------------------- 141 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~------------------- 141 (202)
+||||||..... +.|+..+++|+.|++.++++++|+|++++.++||++||..+.
T Consensus 65 ~lv~~Ag~~~~~-------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~ 137 (257)
T 1fjh_A 65 GLVLCAGLGPQT-------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp EEEECCCCCTTC-------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred EEEECCCCCCCc-------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence 999999975411 238999999999999999999999988778999999999887
Q ss_pred ---------cCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 142 ---------RGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 142 ---------~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
.+.++...|++||++++.+++.++.|++++||+|++|+||+++|++....
T Consensus 138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~ 196 (257)
T 1fjh_A 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG 196 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------
T ss_pred hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh
Confidence 34457789999999999999999999999999999999999999997654
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=243.52 Aligned_cols=183 Identities=22% Similarity=0.248 Sum_probs=162.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEE-eCC-------------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTC-SRN-------------QIELDARLHEWKNKGFKVTGSVCDLSSREQRE 65 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~-~r~-------------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~ 65 (202)
|++|||||++|||+++|++|+++|++ |+++ +|+ .+.+++..+++...+.++.++.+|++|.++++
T Consensus 252 ~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~ 331 (525)
T 3qp9_A 252 GTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAA 331 (525)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHH
Confidence 68999999999999999999999996 7777 888 35566777788777889999999999999999
Q ss_pred HHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCC
Q 028868 66 KLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI 144 (202)
Q Consensus 66 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~ 144 (202)
++++++. .+ ++||+||||||+....++.+.+.++++.++++|+.|++++.+.+.+.+++++ .++||++||.++..+.
T Consensus 332 ~~~~~i~-~~-g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~ 409 (525)
T 3qp9_A 332 RLLAGVS-DA-HPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG 409 (525)
T ss_dssp HHHHTSC-TT-SCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred HHHHHHH-hc-CCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence 9999988 66 7999999999998888899999999999999999999999999999998766 7899999999999999
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++++.|+++|+++++|+ .++.+.|+++++|+||+++|+|..
T Consensus 410 ~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~ 450 (525)
T 3qp9_A 410 AGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVT 450 (525)
T ss_dssp TTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGG
T ss_pred CCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCcccccccc
Confidence 99999999999998874 566778999999999999999983
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-34 Score=215.53 Aligned_cols=173 Identities=18% Similarity=0.217 Sum_probs=153.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||++++++|+++ +|++++|++++++...+++.. .++.+|++|++++++++++ + +++|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-----~~~~~D~~~~~~~~~~~~~----~-~~id 68 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-----RALPADLADELEAKALLEE----A-GPLD 68 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-----EECCCCTTSHHHHHHHHHH----H-CSEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-----cEEEeeCCCHHHHHHHHHh----c-CCCC
Confidence 78999999999999999999998 999999998888777666531 7888999999999998887 5 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+|||+||.....++.+.+.++|+..+++|+.+++.+++++ .+++.++||++||..+..+.++...|+++|++++.+
T Consensus 69 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 144 (207)
T 2yut_A 69 LLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAY 144 (207)
T ss_dssp EEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHH
Confidence 9999999887777888899999999999999999999988 344468999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.++.++.++|+++++++||++.|++..
T Consensus 145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~ 173 (207)
T 2yut_A 145 LEAARKELLREGVHLVLVRLPAVATGLWA 173 (207)
T ss_dssp HHHHHHHHHTTTCEEEEECCCCBCSGGGG
T ss_pred HHHHHHHHhhhCCEEEEEecCcccCCCcc
Confidence 99999999989999999999999999854
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=211.36 Aligned_cols=163 Identities=25% Similarity=0.312 Sum_probs=149.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||||++++++|+ +|++|++++|+++ .+.+|++++++++++++++ +++|
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~-----~~~d 60 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV-----GKVD 60 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH-----CCEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh-----CCCC
Confidence 379999999999999999999 9999999999864 4679999999999988764 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+|||+||.....++.+.+.++|++.+++|+.+++.+++++.|.|++ .++||++||..+..+.++...|+++|++++.+
T Consensus 61 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~ 138 (202)
T 3d7l_A 61 AIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIMMEDPIVQGASAAMANGAVTAF 138 (202)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchhhcCCCCccHHHHHHHHHHHHH
Confidence 9999999877777788899999999999999999999999999865 38999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.++.|+ ++|++++.|+||++.|++..
T Consensus 139 ~~~~~~e~-~~gi~v~~v~pg~v~~~~~~ 166 (202)
T 3d7l_A 139 AKSAAIEM-PRGIRINTVSPNVLEESWDK 166 (202)
T ss_dssp HHHHTTSC-STTCEEEEEEECCBGGGHHH
T ss_pred HHHHHHHc-cCCeEEEEEecCccCCchhh
Confidence 99999999 78999999999999999753
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-32 Score=253.14 Aligned_cols=185 Identities=21% Similarity=0.219 Sum_probs=162.6
Q ss_pred CEEEEecCCCc-hHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHh----cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRG-IGHATVEELARFGAIVHTC-SRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~g-iG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~----~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||++| ||+++|++|+++|++|+++ +|+.++++...+++.. .+.++.++.+|++|.++++++++++.+.
T Consensus 676 KvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~ 755 (1887)
T 2uv8_A 676 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDT 755 (1887)
T ss_dssp CEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHh
Confidence 68999999998 9999999999999999998 6887777776666532 2668999999999999999999999988
Q ss_pred -----hCC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHHHHhHhHHHHHHHH--hHHHhcCCCCeEEEecCCCCccC
Q 028868 75 -----FQG-KLNILINNAAIAFVK-PTVDIT--AEDMSTVSSTNFESVFHLSQLA--HPLFKASGNGSIVFISSVGGVRG 143 (202)
Q Consensus 75 -----~~~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~~iv~vsS~~~~~~ 143 (202)
+ + +||+||||||+.... ++.+.+ .++|+.++++|+.+++.+++.+ +|.|.+++.|+||++||.++..+
T Consensus 756 ~~~~G~-G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g 834 (1887)
T 2uv8_A 756 EKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG 834 (1887)
T ss_dssp TTTTSC-CCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS
T ss_pred cccccc-CCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC
Confidence 5 5 899999999988766 788888 8999999999999999999988 78887766789999999998877
Q ss_pred CCCChhhhhhHHHHHHH-HHHHHHHHccCCcEEEEeeCCccc-CCCcc
Q 028868 144 IPSVSLYGAYKGAMNQL-TKNLACEWAKDNIRTNTVAPWVIK-TSMIK 189 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~-~~~la~e~~~~gi~v~~v~pG~v~-t~~~~ 189 (202)
+...|++||+++++| ++.++.++++. |+||+|+||+++ |+|..
T Consensus 835 --g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~ 879 (1887)
T 2uv8_A 835 --GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS 879 (1887)
T ss_dssp --CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC----
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccc
Confidence 678999999999999 99999999877 999999999999 88865
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.2e-31 Score=246.66 Aligned_cols=186 Identities=19% Similarity=0.213 Sum_probs=161.8
Q ss_pred CEEEEecCCCc-hHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHH----hcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRG-IGHATVEELARFGAIVHTCS-RNQIELDARLHEWK----NKGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~g-iG~a~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~----~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||++| ||+++|++|+++|++|++++ |+.+.+....+++. ..+.++.++.+|++|.++++++++++.+.
T Consensus 653 KvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~ 732 (1878)
T 2uv9_A 653 KHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDT 732 (1878)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCS
T ss_pred CEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 68999999999 99999999999999999985 66766665555442 23678999999999999999999999988
Q ss_pred ---hCC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHHHHhHhHHHHHHH--HhHHHhcCCCCeEEEecCCCCccCCC
Q 028868 75 ---FQG-KLNILINNAAIAFVK-PTVDIT--AEDMSTVSSTNFESVFHLSQL--AHPLFKASGNGSIVFISSVGGVRGIP 145 (202)
Q Consensus 75 ---~~~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~~~~~~~~~iv~vsS~~~~~~~~ 145 (202)
+ + +||+||||||+.... ++.+.+ .++|+.++++|+.|++.+++. ++|.|.+++.|+||++||.++..+
T Consensus 733 ~~~~-G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g-- 809 (1878)
T 2uv9_A 733 KNGL-GWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG-- 809 (1878)
T ss_dssp SSSC-CCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--
T ss_pred hccc-CCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--
Confidence 7 6 899999999988776 788888 899999999999999999977 778887766689999999998877
Q ss_pred CChhhhhhHHHHHHHHHHHHH-HHccCCcEEEEeeCCccc-CCCccc
Q 028868 146 SVSLYGAYKGAMNQLTKNLAC-EWAKDNIRTNTVAPWVIK-TSMIKP 190 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~-e~~~~gi~v~~v~pG~v~-t~~~~~ 190 (202)
+...|++||+++++|++.++. ++++. |+||+|+||+++ |+|...
T Consensus 810 g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~ 855 (1878)
T 2uv9_A 810 NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSA 855 (1878)
T ss_dssp CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCccccc
Confidence 467899999999999987655 47665 999999999999 998754
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-31 Score=224.45 Aligned_cols=179 Identities=24% Similarity=0.277 Sum_probs=158.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh---hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|++|||||+||||+++|++|+++|+ +|++++|+. +..++..+++...+.++.++.+|++|.++++++++++.+.
T Consensus 240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-- 317 (496)
T 3mje_A 240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-- 317 (496)
T ss_dssp SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT--
T ss_pred CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh--
Confidence 6899999999999999999999999 899999964 3466777788888889999999999999999999988765
Q ss_pred CCccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 77 GKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 77 ~~id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
+++|+||||||+. ...++.+.+.++|+.++++|+.|++++.+.+.+ ...++||++||.++..+.+++..|+++|+
T Consensus 318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~----~~~~~iV~~SS~a~~~g~~g~~~YaAaKa 393 (496)
T 3mje_A 318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD----LDLDAFVLFSSGAAVWGSGGQPGYAAANA 393 (496)
T ss_dssp SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT----SCCSEEEEEEEHHHHTTCTTCHHHHHHHH
T ss_pred CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc----cCCCEEEEEeChHhcCCCCCcHHHHHHHH
Confidence 4899999999997 777889999999999999999999999988744 34689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+++.|++. +.+.|+++++|+||++.++.+.
T Consensus 394 ~ldala~~----~~~~Gi~v~sV~pG~w~~~gm~ 423 (496)
T 3mje_A 394 YLDALAEH----RRSLGLTASSVAWGTWGEVGMA 423 (496)
T ss_dssp HHHHHHHH----HHHTTCCCEEEEECEESSSCC-
T ss_pred HHHHHHHH----HHhcCCeEEEEECCcccCCccc
Confidence 99988874 4457999999999999766543
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.9e-33 Score=250.00 Aligned_cols=185 Identities=21% Similarity=0.219 Sum_probs=163.9
Q ss_pred CEEEEecCCCc-hHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHh----cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRG-IGHATVEELARFGAIVHTC-SRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~g-iG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~----~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||++| ||+++|++|+++|++|+++ +|+.++++...+++.. .+.++.++.+|++|.++++++++++.+.
T Consensus 477 KvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~ 556 (1688)
T 2pff_A 477 KYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDT 556 (1688)
T ss_dssp CCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSC
T ss_pred CEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 67999999998 9999999999999999998 6777776666666532 2568999999999999999999999988
Q ss_pred -----hCC-CccEEEEcCCCCCCC-CCCCCC--HHHHHHHHHHHhHhHHHHHHHH--hHHHhcCCCCeEEEecCCCCccC
Q 028868 75 -----FQG-KLNILINNAAIAFVK-PTVDIT--AEDMSTVSSTNFESVFHLSQLA--HPLFKASGNGSIVFISSVGGVRG 143 (202)
Q Consensus 75 -----~~~-~id~vi~~ag~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~~~~~~~~~iv~vsS~~~~~~ 143 (202)
+ + +||+||||||+.... ++.+.+ .++|+.++++|+.+++.+++.+ +|.|.+++.|+||++||.++..+
T Consensus 557 ~~~~Gf-G~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G 635 (1688)
T 2pff_A 557 EKNGGL-GWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG 635 (1688)
T ss_dssp TTSSSC-CCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS
T ss_pred cccccc-CCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC
Confidence 6 5 899999999988766 788888 9999999999999999999998 78888776789999999988876
Q ss_pred CCCChhhhhhHHHHHHH-HHHHHHHHccCCcEEEEeeCCccc-CCCcc
Q 028868 144 IPSVSLYGAYKGAMNQL-TKNLACEWAKDNIRTNTVAPWVIK-TSMIK 189 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~-~~~la~e~~~~gi~v~~v~pG~v~-t~~~~ 189 (202)
+...|++||+++++| ++.++.++++. |+||+|+||+++ |+|..
T Consensus 636 --g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~ 680 (1688)
T 2pff_A 636 --GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMS 680 (1688)
T ss_dssp --CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSC
T ss_pred --CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccC
Confidence 678999999999999 78888888876 999999999999 78765
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-32 Score=238.38 Aligned_cols=177 Identities=23% Similarity=0.276 Sum_probs=161.9
Q ss_pred CEEEEecCCCchHHHHHHHHH-HCCC-EEEEEeCC---hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELA-RFGA-IVHTCSRN---QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~-~~g~-~Vi~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||++|||+++|++|+ ++|+ +|++++|+ .+..++..+++...+.++.++.+|++|.++++++++++.+.+
T Consensus 531 ~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~ 610 (795)
T 3slk_A 531 GTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEH 610 (795)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred cceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC
Confidence 689999999999999999999 7999 69999998 456777888888888999999999999999999999987764
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
+||+||||||+....++.+++.++|+..+++|+.|++++.+++.|.| +||++||.++..+.++++.|+++|+
T Consensus 611 --~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~ag~~g~~g~~~YaAaka 682 (795)
T 3slk_A 611 --PLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSVSGVLGSGGQGNYAAANS 682 (795)
T ss_dssp --CEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEETHHHHTCSSCHHHHHHHH
T ss_pred --CCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccHHhcCCCCCCHHHHHHHH
Confidence 89999999999888889999999999999999999999999997776 7999999999999999999999995
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+++|++++.+.||++++|+||++.|+++.
T Consensus 683 ----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~ 712 (795)
T 3slk_A 683 ----FLDALAQQRQSRGLPTRSLAWGPWAEHGMA 712 (795)
T ss_dssp ----HHHHHHHHHHHTTCCEEEEEECCCSCCCHH
T ss_pred ----HHHHHHHHHHHcCCeEEEEECCeECcchhh
Confidence 677777788888999999999999998654
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=205.75 Aligned_cols=167 Identities=23% Similarity=0.289 Sum_probs=144.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+||||++++++|+++|++|++++|+++++.. .+.+|+++.++++++++++ .+++|
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~----~~~~d 64 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC----GGVLD 64 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH----TTCCS
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc----CCCcc
Confidence 689999999999999999999999999999998754321 1568999999998888754 26899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC----------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---------------- 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------- 144 (202)
+|||+||.... .+.++..+++|+.+++.+++++.|.|++++.++||++||..+..+.
T Consensus 65 ~vi~~Ag~~~~-------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
T 2dkn_A 65 GLVCCAGVGVT-------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA 137 (255)
T ss_dssp EEEECCCCCTT-------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred EEEECCCCCCc-------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence 99999997541 1237899999999999999999999988777999999999887654
Q ss_pred ----------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 145 ----------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 145 ----------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++...|+++|++++.+++.++.++.+.|+++++++||++.|++....
T Consensus 138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~ 194 (255)
T 2dkn_A 138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS 194 (255)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH
T ss_pred hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc
Confidence 56778999999999999999999988899999999999999987543
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=213.39 Aligned_cols=178 Identities=25% Similarity=0.263 Sum_probs=155.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChh---HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|++|||||+||||++++++|+++|+ +|++++|+.. ..++..+++...+.++.++.+|++|.++++++++.+ ..+
T Consensus 227 ~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~~- 304 (486)
T 2fr1_A 227 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GDD- 304 (486)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CTT-
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hhc-
Confidence 6899999999999999999999999 5999999875 456667777777888999999999999999999988 455
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
+++|+|||+||+....++.+.+.++++.++++|+.|++++.+.+. +.+.++||++||.++..+.++...|+++|++
T Consensus 305 g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~----~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~ 380 (486)
T 2fr1_A 305 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTR----ELDLTAFVLFSSFASAFGAPGLGGYAPGNAY 380 (486)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHT----TSCCSEEEEEEEHHHHTCCTTCTTTHHHHHH
T ss_pred CCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhC----cCCCCEEEEEcChHhcCCCCCCHHHHHHHHH
Confidence 689999999999877788889999999999999999999999873 3457899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCC-Cc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTS-MI 188 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~-~~ 188 (202)
++.|++. +...|+++++|+||++.++ |.
T Consensus 381 l~~la~~----~~~~gi~v~~i~pG~~~~~gm~ 409 (486)
T 2fr1_A 381 LDGLAQQ----RRSDGLPATAVAWGTWAGSGMA 409 (486)
T ss_dssp HHHHHHH----HHHTTCCCEEEEECCBC-----
T ss_pred HHHHHHH----HHhcCCeEEEEECCeeCCCccc
Confidence 9988664 4456999999999999886 44
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-28 Score=208.82 Aligned_cols=177 Identities=24% Similarity=0.278 Sum_probs=156.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChh---HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQI---ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|++|||||+||||++++++|+++|+ +|++++|+.. ..++..+++...+.++.++.+|++|.++++++++.
T Consensus 260 ~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~------ 333 (511)
T 2z5l_A 260 GTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA------ 333 (511)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc------
Confidence 6899999999999999999999999 6999999864 45667777777788899999999999999998886
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
+++|+||||||+....++.+.+.++++.++++|+.|++++.+.+.+. .+.++||++||.++..+.++...|+++|++
T Consensus 334 ~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ 410 (511)
T 2z5l_A 334 YPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVTGTWGNAGQGAYAAANAA 410 (511)
T ss_dssp SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGGGTTCCTTBHHHHHHHHH
T ss_pred CCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHHhcCCCCCCHHHHHHHHH
Confidence 58999999999988778888999999999999999999998876432 146899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcc-cCCCccc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVI-KTSMIKP 190 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v-~t~~~~~ 190 (202)
++.|++.+ ...|+++++|+||++ +|+|...
T Consensus 411 ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~ 441 (511)
T 2z5l_A 411 LDALAERR----RAAGLPATSVAWGLWGGGGMAAG 441 (511)
T ss_dssp HHHHHHHH----HTTTCCCEEEEECCBCSTTCCCC
T ss_pred HHHHHHHH----HHcCCcEEEEECCcccCCccccc
Confidence 99998864 356999999999999 7888754
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-28 Score=234.75 Aligned_cols=185 Identities=19% Similarity=0.179 Sum_probs=149.0
Q ss_pred CEEEEecCCCc-hHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH-
Q 028868 1 MTALVTGGTRG-IGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS- 73 (202)
Q Consensus 1 k~~lItGas~g-iG~a~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~- 73 (202)
|++|||||++| ||+++|+.|++.|++|++++|+.+. ++++.+++...+..+..+.+|+++.++++++++++.+
T Consensus 2137 KvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~ 2216 (3089)
T 3zen_D 2137 EVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTE 2216 (3089)
T ss_dssp CEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSC
T ss_pred CEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhh
Confidence 78999999999 9999999999999999999998776 5666666666677899999999999999999999988
Q ss_pred ---HhCCCccEEEEcCCC----CCC-CCCCCCCHHH----HHHHHHHHhHhHHHHHHHHhHHHhcCCCC----eEEEecC
Q 028868 74 ---IFQGKLNILINNAAI----AFV-KPTVDITAED----MSTVSSTNFESVFHLSQLAHPLFKASGNG----SIVFISS 137 (202)
Q Consensus 74 ---~~~~~id~vi~~ag~----~~~-~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~~~~~~~~----~iv~vsS 137 (202)
.| |++|+||||||+ ... ....+.+.++ ++..+++|+.+++.+++.+.|.|.+++.+ .++..++
T Consensus 2217 ~~~~f-G~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss 2295 (3089)
T 3zen_D 2217 QTESL-GPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSP 2295 (3089)
T ss_dssp CEEEE-SSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECS
T ss_pred hhhhc-CCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCc
Confidence 78 799999999997 211 1222223333 45559999999999999999999875432 2333343
Q ss_pred CCCccCCCCChhhhhhHHHHHHHHHHHHHH--HccCCcEEEEeeCCccc-CCCcc
Q 028868 138 VGGVRGIPSVSLYGAYKGAMNQLTKNLACE--WAKDNIRTNTVAPWVIK-TSMIK 189 (202)
Q Consensus 138 ~~~~~~~~~~~~y~asK~a~~~~~~~la~e--~~~~gi~v~~v~pG~v~-t~~~~ 189 (202)
..+ ..++...|++||+|+.+|+++|+.| ++ .+|+||+|+||+|+ |++..
T Consensus 2296 ~~g--~~g~~~aYsASKaAl~~LtrslA~E~~~a-~~IrVn~v~PG~v~tT~l~~ 2347 (3089)
T 3zen_D 2296 NRG--MFGGDGAYGEAKSALDALENRWSAEKSWA-ERVSLAHALIGWTKGTGLMG 2347 (3089)
T ss_dssp STT--SCSSCSSHHHHGGGHHHHHHHHHHCSTTT-TTEEEEEEECCCEECSTTTT
T ss_pred ccc--cCCCchHHHHHHHHHHHHHHHHHhccccC-CCeEEEEEeecccCCCcccc
Confidence 333 2345668999999999999999999 66 46999999999999 77654
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-27 Score=186.60 Aligned_cols=157 Identities=20% Similarity=0.242 Sum_probs=132.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|++.+.. +.++.++.+|++|.+++.++++ .+|
T Consensus 4 k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~--------~~D 66 (267)
T 3rft_A 4 KRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA--------GCD 66 (267)
T ss_dssp EEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT--------TCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc--------CCC
Confidence 57999999999999999999999999999999875432 4568999999999999887765 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc------------cCCCCCh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV------------RGIPSVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~------------~~~~~~~ 148 (202)
+||||||.. +.+.|+.++++|+.|++.+++++ ++++.++||++||..++ .+.++..
T Consensus 67 ~vi~~Ag~~--------~~~~~~~~~~~N~~g~~~l~~a~----~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~ 134 (267)
T 3rft_A 67 GIVHLGGIS--------VEKPFEQILQGNIIGLYNLYEAA----RAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDG 134 (267)
T ss_dssp EEEECCSCC--------SCCCHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCS
T ss_pred EEEECCCCc--------CcCCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCC
Confidence 999999973 22457889999999999999998 44457899999998776 3445668
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.|+.||++.+.+++.++.++ |++++.|.||.+.+++..
T Consensus 135 ~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~ 172 (267)
T 3rft_A 135 LYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNN 172 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCS
T ss_pred hHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCC
Confidence 89999999999999999886 688888888888776543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-25 Score=172.29 Aligned_cols=155 Identities=17% Similarity=0.149 Sum_probs=128.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeE-EEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKV-TGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v-~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+|+||++++++|+++|++|++++|+++++....+. ++ .++.+|++ +.+.+.+ +.+
T Consensus 22 ~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~------~~~~~~~~Dl~---------~~~~~~~-~~~ 85 (236)
T 3e8x_A 22 MRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRER------GASDIVVANLE---------EDFSHAF-ASI 85 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHT------TCSEEEECCTT---------SCCGGGG-TTC
T ss_pred CeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhC------CCceEEEcccH---------HHHHHHH-cCC
Confidence 6899999999999999999999999999999998877654321 46 88899999 2344455 579
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC---CCChhhhhhHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---PSVSLYGAYKGA 156 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---~~~~~y~asK~a 156 (202)
|+|||+||.... ++++..+++|+.++..+++++ ++.+.++||++||..+..+. ++...|+.+|++
T Consensus 86 D~vi~~ag~~~~--------~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~ 153 (236)
T 3e8x_A 86 DAVVFAAGSGPH--------TGADKTILIDLWGAIKTIQEA----EKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRL 153 (236)
T ss_dssp SEEEECCCCCTT--------SCHHHHHHTTTHHHHHHHHHH----HHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHH
T ss_pred CEEEECCCCCCC--------CCccccchhhHHHHHHHHHHH----HHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHH
Confidence 999999997532 457889999999999999988 44457899999998776654 567899999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
++.+++ ..|++++.++||++.++....
T Consensus 154 ~e~~~~-------~~gi~~~~lrpg~v~~~~~~~ 180 (236)
T 3e8x_A 154 ADDELK-------RSSLDYTIVRPGPLSNEESTG 180 (236)
T ss_dssp HHHHHH-------HSSSEEEEEEECSEECSCCCS
T ss_pred HHHHHH-------HCCCCEEEEeCCcccCCCCCC
Confidence 999876 468999999999999987543
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=217.39 Aligned_cols=176 Identities=23% Similarity=0.265 Sum_probs=140.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhH---HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIE---LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~---~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|++|||||++|||+++|++|+++|++ |++++|+..+ .....+++...+.++.++.+|++|.++++++++++.+ +
T Consensus 1885 k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~-~- 1962 (2512)
T 2vz8_A 1885 KSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ-L- 1962 (2512)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-H-
T ss_pred CEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-c-
Confidence 68999999999999999999999996 8888998644 3455566666678899999999999999999999874 6
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
++||+||||||+....++.+++.++|+..+++|+.|++++.+.+.+.|.+ .++||++||.++..+.++.+.|+++|++
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS~ag~~g~~g~~~Y~aaKaa 2040 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSSVSCGRGNAGQANYGFANSA 2040 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECCHHHHTTCTTCHHHHHHHHH
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecchhhcCCCCCcHHHHHHHHH
Confidence 79999999999887778899999999999999999999999999998865 4899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCccc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIK 184 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~ 184 (202)
+++|++..+.+ |+...++..|.+.
T Consensus 2041 l~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A 2041 MERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp HHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred HHHHHHHHHHC----CCcEEEEEccCcC
Confidence 99999976654 6777777777663
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=8.1e-25 Score=176.27 Aligned_cols=171 Identities=20% Similarity=0.170 Sum_probs=138.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++|++|++++|+.+......+.+... +.++.++.+|++|.++++++++. .++
T Consensus 6 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~------~~~ 79 (341)
T 3enk_A 6 GTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA------HPI 79 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH------SCC
T ss_pred cEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc------cCC
Confidence 58999999999999999999999999999999876655555554432 45688999999999999998876 479
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CCCCCh
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIPSVS 148 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~ 148 (202)
|+|||+||..... ...+..++.+++|+.++..+++++ ++.+.++||++||.+.+. +..+..
T Consensus 80 d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~ 151 (341)
T 3enk_A 80 TAAIHFAALKAVG----ESVAKPIEYYRNNLDSLLSLLRVM----RERAVKRIVFSSSATVYGVPERSPIDETFPLSATN 151 (341)
T ss_dssp CEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSS
T ss_pred cEEEECccccccC----ccccChHHHHHHHHHHHHHHHHHH----HhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCC
Confidence 9999999975432 133445678889999999887765 555568999999976542 223457
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.|+.+|.+.+.+++.++.+++ |++++.+.||.+..+.
T Consensus 152 ~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~ 188 (341)
T 3enk_A 152 PYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAH 188 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCC
T ss_pred hhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCc
Confidence 899999999999999998864 6999999999998763
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=176.39 Aligned_cols=166 Identities=19% Similarity=0.190 Sum_probs=139.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++ |+ +|++++|++.+.....+++. ..++.++.+|++|.+++.++++ .
T Consensus 22 k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~--------~ 91 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE--------G 91 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT--------T
T ss_pred CEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh--------c
Confidence 68999999999999999999999 98 99999999888777666553 2468899999999888776653 5
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|+|||+||..... ....+..+.+++|+.|+.++++++.+ .+.+++|++||..+..+ ...|+++|++.+
T Consensus 92 ~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~l~~aa~~----~~v~~~V~~SS~~~~~p---~~~Y~~sK~~~E 160 (344)
T 2gn4_A 92 VDICIHAAALKHVP----IAEYNPLECIKTNIMGASNVINACLK----NAISQVIALSTDKAANP---INLYGATKLCSD 160 (344)
T ss_dssp CSEEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEECCGGGSSC---CSHHHHHHHHHH
T ss_pred CCEEEECCCCCCCC----chhcCHHHHHHHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCC---ccHHHHHHHHHH
Confidence 89999999975321 12344568999999999999999855 34689999999766543 578999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+++.++.++.+.|++++++.||++.++.
T Consensus 161 ~~~~~~~~~~~~~g~~~~~vRpg~v~g~~ 189 (344)
T 2gn4_A 161 KLFVSANNFKGSSQTQFSVVRYGNVVGSR 189 (344)
T ss_dssp HHHHHGGGCCCSSCCEEEEECCCEETTCT
T ss_pred HHHHHHHHHhCCCCcEEEEEEeccEECCC
Confidence 99999999888789999999999999865
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-24 Score=173.15 Aligned_cols=171 Identities=15% Similarity=0.076 Sum_probs=136.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++|++|++++|+. .......+.+.. ..++.++.+|++|.++++++++. .++
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~Dl~d~~~~~~~~~~------~~~ 74 (347)
T 1orr_A 2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITK------YMP 74 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHH------HCC
T ss_pred cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc-CCceEEEEcCCCCHHHHHHHHhc------cCC
Confidence 6899999999999999999999999999999853 222233344433 23588899999999999888875 268
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------------
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------------- 142 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------- 142 (202)
|+|||+||.... +.+.++++..+++|+.++..+++++.+... .++||++||.+.+.
T Consensus 75 d~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~ 147 (347)
T 1orr_A 75 DSCFHLAGQVAM----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTCV 147 (347)
T ss_dssp SEEEECCCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred CEEEECCcccCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCccccccccccc
Confidence 999999996431 123457788999999999999999977542 26999999976432
Q ss_pred ----------CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 143 ----------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 143 ----------~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+.++...|+.+|.+.+.+++.++.++ |++++.+.||++.++..
T Consensus 148 ~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~ 200 (347)
T 1orr_A 148 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQ 200 (347)
T ss_dssp TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTC
T ss_pred ccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCC
Confidence 22356789999999999999999886 79999999999999865
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-24 Score=174.87 Aligned_cols=174 Identities=17% Similarity=0.119 Sum_probs=140.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+.++.....+.+. .+.++.++.+|++|.+++.++++.. ++|
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~d 82 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF------QPE 82 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc------CCC
Confidence 689999999999999999999999999999998765444333332 2346888999999999988888753 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc------------CCCCCh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIPSVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~~~~ 148 (202)
+|||+||... .+.+.++++..+++|+.++..+++++.+. ...+++|++||...+. +..+..
T Consensus 83 ~vih~A~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~ 155 (357)
T 1rkx_A 83 IVFHMAAQPL----VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYD 155 (357)
T ss_dssp EEEECCSCCC----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSS
T ss_pred EEEECCCCcc----cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCC
Confidence 9999999632 12345677899999999999999998652 2357999999975321 233567
Q ss_pred hhhhhHHHHHHHHHHHHHHHc------cCCcEEEEeeCCcccCCCc
Q 028868 149 LYGAYKGAMNQLTKNLACEWA------KDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~------~~gi~v~~v~pG~v~t~~~ 188 (202)
.|+.+|.+.+.+++.++.++. +.|++++.+.||++.+|..
T Consensus 156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~ 201 (357)
T 1rkx_A 156 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGD 201 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTC
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCC
Confidence 899999999999999999874 4589999999999998754
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-24 Score=174.05 Aligned_cols=171 Identities=18% Similarity=0.181 Sum_probs=137.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEE-EecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGS-VCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~-~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++|++|++++|+.++.....+.+... +.++.++ .+|++|.++++++++ +
T Consensus 12 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~--------~ 83 (342)
T 1y1p_A 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--------G 83 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--------T
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc--------C
Confidence 68999999999999999999999999999999987766655544322 3467777 799999877665543 5
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-CC-------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GI------------- 144 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~------------- 144 (202)
+|+|||+||..... +++++.+++|+.++..+++++.+ ..+.+++|++||.+.+. +.
T Consensus 84 ~d~vih~A~~~~~~-------~~~~~~~~~n~~g~~~ll~~~~~---~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~ 153 (342)
T 1y1p_A 84 AAGVAHIASVVSFS-------NKYDEVVTPAIGGTLNALRAAAA---TPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSW 153 (342)
T ss_dssp CSEEEECCCCCSCC-------SCHHHHHHHHHHHHHHHHHHHHT---CTTCCEEEEECCGGGTCCCCTTCCCCEECTTCC
T ss_pred CCEEEEeCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHh---CCCCcEEEEeccHHHhcCCCCCCCCcccCcccc
Confidence 89999999975421 24567899999999999998854 23468999999986652 11
Q ss_pred -----------------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 145 -----------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 145 -----------------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
.+...|+.+|.+.+.+++.++.++.. +++++.+.||++.++...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~ 215 (342)
T 1y1p_A 154 NLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDP 215 (342)
T ss_dssp CHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCT
T ss_pred CchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCC
Confidence 12367999999999999999999865 8999999999999987653
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=171.51 Aligned_cols=163 Identities=20% Similarity=0.128 Sum_probs=134.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+.+. .. + ++.++.+|++|.+++.++++. +++|
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~~~------~~~d 76 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVISD------IKPD 76 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHHHh------cCCC
Confidence 689999999999999999999999999999998754 21 1 578889999999999888875 3689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-------------CCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------IPSV 147 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------~~~~ 147 (202)
+|||+||..... .+.++++..+++|+.++..+++++ +.+. +.++||++||.+.+.. .++.
T Consensus 77 ~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~ 149 (321)
T 2pk3_A 77 YIFHLAAKSSVK----DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--LDCRILTIGSSEEYGMILPEESPVSEENQLRPM 149 (321)
T ss_dssp EEEECCSCCCHH----HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--CCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCC
T ss_pred EEEEcCcccchh----hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--CCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCC
Confidence 999999975321 123457889999999999999998 5442 4689999999865432 2456
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
..|+.+|++.+.+++.++.++ |++++.+.||++.+|...
T Consensus 150 ~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~ 188 (321)
T 2pk3_A 150 SPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQS 188 (321)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred CccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCC
Confidence 789999999999999998875 799999999999988654
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.5e-24 Score=172.26 Aligned_cols=187 Identities=18% Similarity=0.082 Sum_probs=150.8
Q ss_pred CEEEEecCCCchHHHHHHHHH-HCCCEEEEEeCChh------------HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQI------------ELDARLHEWKNKGFKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~-~~g~~Vi~~~r~~~------------~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~ 67 (202)
|++||||||+|||+|++..|+ +.|+.|+++.+..+ ......+++.+.|.....+.+|++++++++++
T Consensus 51 K~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~v 130 (401)
T 4ggo_A 51 KNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQV 130 (401)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHH
Confidence 789999999999999999999 68999999887543 23445566777799999999999999999999
Q ss_pred HHHHHHHhCCCccEEEEcCCCCCC-------------CCC---------------------CCCCHHHHHHHHHH---Hh
Q 028868 68 IETVTSIFQGKLNILINNAAIAFV-------------KPT---------------------VDITAEDMSTVSST---NF 110 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~-------------~~~---------------------~~~~~~~~~~~~~~---n~ 110 (202)
++++++++ |+||+|||+++.... +|+ ...+.++++.+..+ ..
T Consensus 131 i~~i~~~~-G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~ 209 (401)
T 4ggo_A 131 IEEAKKKG-IKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGED 209 (401)
T ss_dssp HHHHHHTT-CCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHH
T ss_pred HHHHHHhc-CCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhH
Confidence 99999998 899999999997621 111 12355666655555 45
Q ss_pred HhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCC--ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 111 ESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS--VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~--~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+.+...+...++|.+ +++++.+|+..+....|. .+.++++|++++..++.|+.+++ +++++.++||.+.|.-.
T Consensus 210 ~s~w~~al~~a~lla~--G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~vT~As 285 (401)
T 4ggo_A 210 WERWIKQLSKEGLLEE--GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGLVTRAS 285 (401)
T ss_dssp HHHHHHHHHHTTCEEE--EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCCCCTTG
T ss_pred HHHHHHHHHhhhcccC--CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCccccchh
Confidence 5566677777777855 689999999988766664 45899999999999999999997 48999999999999876
Q ss_pred cchh
Q 028868 189 KPFE 192 (202)
Q Consensus 189 ~~~~ 192 (202)
...|
T Consensus 286 saIP 289 (401)
T 4ggo_A 286 AVIP 289 (401)
T ss_dssp GGSS
T ss_pred hcCC
Confidence 6544
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-23 Score=159.00 Aligned_cols=143 Identities=9% Similarity=0.040 Sum_probs=119.3
Q ss_pred CEEEEecCCCchHHHHHHHHH-HCCCEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~-~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|+||++++++|+ ++|++|++++|+++ +++.+. ..+.++.++.+|++|.++++++++ .
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~--------~ 73 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT--------N 73 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT--------T
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc--------C
Confidence 579999999999999999999 89999999999987 554432 234578999999999998887764 5
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCCh----------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVS---------- 148 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~---------- 148 (202)
+|+|||++|.. |+. ++.+++.|++++.++||++||..+..+.+...
T Consensus 74 ~d~vv~~ag~~-------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~ 129 (221)
T 3r6d_A 74 AEVVFVGAMES-------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI 129 (221)
T ss_dssp CSEEEESCCCC-------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred CCEEEEcCCCC-------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence 79999999953 222 77888888887778999999998887666544
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.|+.+|.+++.+++. .|++++.|+||++.++
T Consensus 130 ~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 130 SYVQGERQARNVLRE-------SNLNYTILRLTWLYND 160 (221)
T ss_dssp HHHHHHHHHHHHHHH-------SCSEEEEEEECEEECC
T ss_pred HHHHHHHHHHHHHHh-------CCCCEEEEechhhcCC
Confidence 899999999988763 6899999999999988
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-23 Score=169.95 Aligned_cols=174 Identities=16% Similarity=0.126 Sum_probs=135.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH----------------HHHHH-HhcCCeEEEEEecCCCHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA----------------RLHEW-KNKGFKVTGSVCDLSSREQ 63 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~----------------~~~~~-~~~~~~v~~~~~Dv~~~~~ 63 (202)
+++|||||+|+||++++++|+++|++|++++|....... ....+ ...+.++.++.+|++|.++
T Consensus 12 ~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~~~ 91 (404)
T 1i24_A 12 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF 91 (404)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred CeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCHHH
Confidence 479999999999999999999999999999987543211 11111 1124568889999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC-CeEEEecCCCCcc
Q 028868 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVR 142 (202)
Q Consensus 64 i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~ 142 (202)
+.++++.. ++|+|||+||...... ...+.++++..+++|+.|+..+++++.+. +. .++|++||.+.+.
T Consensus 92 ~~~~~~~~------~~D~Vih~A~~~~~~~-~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS~~vyg 160 (404)
T 1i24_A 92 LAESFKSF------EPDSVVHFGEQRSAPY-SMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGTMGEYG 160 (404)
T ss_dssp HHHHHHHH------CCSEEEECCSCCCHHH-HTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECCGGGGC
T ss_pred HHHHHhcc------CCCEEEECCCCCCccc-hhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCcHHHhC
Confidence 88887753 5899999999753221 12356677889999999999999988542 33 4999999975432
Q ss_pred ------------------------CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 143 ------------------------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 143 ------------------------~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+..+...|+.+|.+.+.+++.++.++ |++++.+.||+|.+|..
T Consensus 161 ~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~ 227 (404)
T 1i24_A 161 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT 227 (404)
T ss_dssp CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred CCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence 23346789999999999999998876 79999999999998754
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4.2e-25 Score=169.98 Aligned_cols=155 Identities=18% Similarity=0.223 Sum_probs=124.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|+||++++++|+++|+ +|++++|+++++.... ...+.++.+|++|.++++++++ +
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~--------~ 84 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ--------G 84 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS--------S
T ss_pred CeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc--------C
Confidence 6899999999999999999999999 9999999876543211 1247788999999887665543 6
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|+|||+||... ..++++..+++|+.++..+++++ .+.+.++||++||..+..+ +...|+++|++++
T Consensus 85 ~d~vi~~ag~~~-------~~~~~~~~~~~n~~~~~~~~~~~----~~~~~~~iv~~SS~~~~~~--~~~~Y~~sK~~~e 151 (242)
T 2bka_A 85 HDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKS--SNFLYLQVKGEVE 151 (242)
T ss_dssp CSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred CCEEEECCCccc-------ccCCcccceeeeHHHHHHHHHHH----HHCCCCEEEEEccCcCCCC--CcchHHHHHHHHH
Confidence 899999999642 22457889999999999988875 4455689999999877653 3468999999999
Q ss_pred HHHHHHHHHHccCCc-EEEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNI-RTNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi-~v~~v~pG~v~t~~~~ 189 (202)
.+++.+ ++ +++.|+||++.|++..
T Consensus 152 ~~~~~~-------~~~~~~~vrpg~v~~~~~~ 176 (242)
T 2bka_A 152 AKVEEL-------KFDRYSVFRPGVLLCDRQE 176 (242)
T ss_dssp HHHHTT-------CCSEEEEEECCEEECTTGG
T ss_pred HHHHhc-------CCCCeEEEcCceecCCCCC
Confidence 998753 46 8999999999999653
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.4e-23 Score=170.93 Aligned_cols=171 Identities=17% Similarity=0.151 Sum_probs=134.3
Q ss_pred CEEEEecCCCchHHHHHHHHH-HCCCEEEEEeCChhH---------HHHHHHHHHhcC-----Ce---EEEEEecCCCHH
Q 028868 1 MTALVTGGTRGIGHATVEELA-RFGAIVHTCSRNQIE---------LDARLHEWKNKG-----FK---VTGSVCDLSSRE 62 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~-~~g~~Vi~~~r~~~~---------~~~~~~~~~~~~-----~~---v~~~~~Dv~~~~ 62 (202)
|++|||||+|+||++++++|+ ++|++|++++|+... .....+.+.+.. .+ +.++.+|++|.+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 82 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence 589999999999999999999 999999999987543 333322222221 23 888999999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc
Q 028868 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR 142 (202)
Q Consensus 63 ~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 142 (202)
++.+++++ + +++|+|||+||..... .+.++++..+++|+.++..+++++ .+.+.++||++||.+.+.
T Consensus 83 ~~~~~~~~----~-~~~d~vih~A~~~~~~----~~~~~~~~~~~~Nv~g~~~ll~a~----~~~~~~~iv~~SS~~v~g 149 (397)
T 1gy8_A 83 FLNGVFTR----H-GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIFG 149 (397)
T ss_dssp HHHHHHHH----S-CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGTB
T ss_pred HHHHHHHh----c-CCCCEEEECCCccCcC----cchhhHHHHHHHHhHHHHHHHHHH----HHhCCCEEEEECCHHHhC
Confidence 98887764 3 4699999999975321 134667889999999999999986 444567999999965432
Q ss_pred CCC------------------CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 143 GIP------------------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 143 ~~~------------------~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
... +...|+.+|++.+.+++.++.++ |++++.+.||++..+.
T Consensus 150 ~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~ 209 (397)
T 1gy8_A 150 NPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH 209 (397)
T ss_dssp SCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred CCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence 211 25789999999999999999887 7999999999997664
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=3.4e-24 Score=173.83 Aligned_cols=174 Identities=18% Similarity=0.176 Sum_probs=137.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChh--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+|+||++++++|+++ |++|++++|+.. ..+.. +++. .+.++.++.+|++|.+++.+++++ .
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~ 72 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQ------Y 72 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHH------H
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhh------c
Confidence 57999999999999999999998 799999998641 22211 1121 134688999999999999888875 2
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-----CCeEEEecCCCCcc----------
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-----NGSIVFISSVGGVR---------- 142 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----~~~iv~vsS~~~~~---------- 142 (202)
++|+|||+||.... +.+.++++..+++|+.++..+++++.+.|..-+ .++||++||.+.+.
T Consensus 73 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~ 148 (361)
T 1kew_A 73 QPDAVMHLAAESHV----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN 148 (361)
T ss_dssp CCSEEEECCSCCCH----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccc
Confidence 68999999997531 224466788999999999999999998875311 35999999965321
Q ss_pred -----------CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 143 -----------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 143 -----------~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+.++...|+.+|++.+.+++.++.++ |++++.+.||++.++...
T Consensus 149 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~ 203 (361)
T 1kew_A 149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHF 203 (361)
T ss_dssp TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCC
T ss_pred cccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCC
Confidence 23456789999999999999999886 799999999999998753
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5e-24 Score=171.54 Aligned_cols=174 Identities=20% Similarity=0.086 Sum_probs=135.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH-HHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~-~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++|++|++++|+++.... ..+.+. ...++.++.+|++|.+++.++++.. ++
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~ 76 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKV------QP 76 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHH------CC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc-ccCceeEEECCCCCHHHHHHHHHhc------CC
Confidence 689999999999999999999999999999998754321 122221 1236888999999999998888764 68
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-----------cCCCCCh
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-----------RGIPSVS 148 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-----------~~~~~~~ 148 (202)
|+|||+||.... +.+.++++..+++|+.++..+++++.+. ...++||++||.+.+ .+.++..
T Consensus 77 d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~ 149 (345)
T 2z1m_A 77 DEVYNLAAQSFV----GVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRS 149 (345)
T ss_dssp SEEEECCCCCCH----HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred CEEEECCCCcch----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCCCCCC
Confidence 999999996431 1234567889999999999999998642 113799999998532 2344567
Q ss_pred hhhhhHHHHHHHHHHHHHHHc---cCCcEEEEeeCCcccCCCc
Q 028868 149 LYGAYKGAMNQLTKNLACEWA---KDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~---~~gi~v~~v~pG~v~t~~~ 188 (202)
.|+.+|++.+.+++.++.+++ ..++.++.+.||...|.+.
T Consensus 150 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~ 192 (345)
T 2z1m_A 150 PYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVT 192 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchh
Confidence 899999999999999999875 3456778888998887653
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=161.93 Aligned_cols=162 Identities=14% Similarity=0.097 Sum_probs=125.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|+||++++++|+++ |++|++++|++++.... ..++.++.+|++|.+++.++++ .
T Consensus 5 ~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~--------~ 69 (253)
T 1xq6_A 5 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ--------G 69 (253)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT--------T
T ss_pred CEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc--------C
Confidence 68999999999999999999999 89999999997655332 3457788999999988877764 4
Q ss_pred ccEEEEcCCCCCCCCC---------CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChh
Q 028868 79 LNILINNAAIAFVKPT---------VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL 149 (202)
Q Consensus 79 id~vi~~ag~~~~~~~---------~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 149 (202)
+|+|||+||....... .+...++++..+++|+.++..+++++. +.+.++||++||..+..+.++...
T Consensus 70 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~iv~~SS~~~~~~~~~~~~ 145 (253)
T 1xq6_A 70 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPDHPLNK 145 (253)
T ss_dssp CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTTCGGGG
T ss_pred CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH----HcCCCEEEEEcCccCCCCCCcccc
Confidence 8999999997532110 112234455678899999999988873 344679999999887655444444
Q ss_pred -----hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 150 -----YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 150 -----y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
|+.+|.+++.+++. .|++++.++||++.++..
T Consensus 146 ~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~ 182 (253)
T 1xq6_A 146 LGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEG 182 (253)
T ss_dssp GGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCS
T ss_pred ccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCc
Confidence 55589999888752 689999999999998764
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-23 Score=165.87 Aligned_cols=170 Identities=20% Similarity=0.187 Sum_probs=132.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH------HHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE------LDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~------~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++|||||+|+||++++++|+++|++|++++|+... .....+.+.. .+.++.++.+|++|.+++.++++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~--- 79 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--- 79 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH---
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHh---
Confidence 689999999999999999999999999999875322 1122222322 244688899999999998888765
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC----------
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------- 143 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------- 143 (202)
.++|+|||+||..... .+.++++..+++|+.++..+++++ ++.+.++||++||...+..
T Consensus 80 ---~~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~E~~ 148 (348)
T 1ek6_A 80 ---YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDEAH 148 (348)
T ss_dssp ---CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred ---cCCCEEEECCCCcCcc----chhhchHHHHHHHHHHHHHHHHHH----HHhCCCEEEEECcHHHhCCCCCCCcCCCC
Confidence 2699999999965321 134567889999999999999876 4445679999999765421
Q ss_pred --CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 144 --IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 144 --~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.|....|+.+|++.+.+++.++.+ ..++++..+.|+.+..+
T Consensus 149 ~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~ 191 (348)
T 1ek6_A 149 PTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA 191 (348)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred CCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCC
Confidence 123678999999999999999887 34699999999988765
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.7e-23 Score=166.86 Aligned_cols=170 Identities=16% Similarity=0.111 Sum_probs=134.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh----HHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI----ELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||+|+||++++++|+++|++|++++|+.. .+....+++... +.++.++.+|++|.+++.++++
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 101 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA------ 101 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT------
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc------
Confidence 68999999999999999999999999999999753 333333222111 2468899999999888777654
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC----------
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP---------- 145 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------- 145 (202)
.+|+|||+||..... .+.++++..+++|+.++..+++++.+ .+.+++|++||...+.+.+
T Consensus 102 --~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~E~~~~ 171 (352)
T 1sb8_A 102 --GVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAARD----AKVQSFTYAASSSTYGDHPGLPKVEDTIG 171 (352)
T ss_dssp --TCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred --CCCEEEECCcccCch----hhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhcCCCCCCCCCCCCCC
Confidence 589999999964321 13466788999999999999998844 3567999999987654332
Q ss_pred -CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 146 -SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 146 -~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+...|+.+|.+.+.+++.++.++ |++++.+.||++.++...
T Consensus 172 ~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~ 213 (352)
T 1sb8_A 172 KPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQD 213 (352)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCC
T ss_pred CCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCC
Confidence 36789999999999999998876 799999999999988653
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.7e-24 Score=160.51 Aligned_cols=151 Identities=13% Similarity=0.152 Sum_probs=126.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+|+||++++++|+++|++|++++|++++.... .++.++.+|++| .+++.++++ .+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~--------~~ 64 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH--------GM 64 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT--------TC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc--------CC
Confidence 6899999999999999999999999999999998654332 468899999999 887766654 58
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCC-------Chhhhh
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-------VSLYGA 152 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-------~~~y~a 152 (202)
|+|||+||.... ..+++|+.++..+++++ ++.+.+++|++||..+..+.+. ...|+.
T Consensus 65 d~vi~~ag~~~~------------~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~ 128 (219)
T 3dqp_A 65 DAIINVSGSGGK------------SLLKVDLYGAVKLMQAA----EKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYI 128 (219)
T ss_dssp SEEEECCCCTTS------------SCCCCCCHHHHHHHHHH----HHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHH
T ss_pred CEEEECCcCCCC------------CcEeEeHHHHHHHHHHH----HHhCCCEEEEECcccccCCCcccccccccccHHHH
Confidence 999999997642 15568899999988887 4555679999999988776665 789999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+|.+.+.+++ ...|++++.+.||++.++...
T Consensus 129 sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~ 159 (219)
T 3dqp_A 129 AKHFADLYLT------KETNLDYTIIQPGALTEEEAT 159 (219)
T ss_dssp HHHHHHHHHH------HSCCCEEEEEEECSEECSCCC
T ss_pred HHHHHHHHHH------hccCCcEEEEeCceEecCCCC
Confidence 9999999887 357899999999999987543
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.4e-23 Score=167.34 Aligned_cols=169 Identities=17% Similarity=0.091 Sum_probs=132.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChh--HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQI--ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~--~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|++|||||+|+||++++++|+++| ++|++++|+.. ..+.. +++. .+.++.++.+|++|.+++.+++.
T Consensus 4 m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------- 74 (336)
T 2hun_A 4 MKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELVR------- 74 (336)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHH-------
T ss_pred CeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHhh-------
Confidence 579999999999999999999997 89999998642 11111 1111 13468899999999998887762
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CCC
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIP 145 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~ 145 (202)
++|+|||+||.... +.+.++++..+++|+.++..+++++.+. ...++||++||.+.+. +.+
T Consensus 75 -~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~ 146 (336)
T 2hun_A 75 -KVDGVVHLAAESHV----DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTENDRLM 146 (336)
T ss_dssp -TCSEEEECCCCCCH----HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTBCCC
T ss_pred -CCCEEEECCCCcCh----hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCCCCC
Confidence 58999999997531 1234567889999999999999999765 2247999999975322 334
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+...|+.+|++.+.+++.++.++ |++++.+.||++.++...
T Consensus 147 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~ 187 (336)
T 2hun_A 147 PSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQF 187 (336)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCC
T ss_pred CCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCC
Confidence 56789999999999999998875 799999999999998753
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=167.15 Aligned_cols=165 Identities=23% Similarity=0.182 Sum_probs=130.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|....... ....++.++.+|++|.+++++++++ ..+|
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~d 68 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFRE------FRPT 68 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHH------HCCS
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHh------cCCC
Confidence 689999999999999999999999999999985322111 1112467889999999998888764 2689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-------------CCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------IPSV 147 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------~~~~ 147 (202)
.|||+|+.... ..+.++++..+++|+.|+..+++++. +.+.+++|++||.++..+ ..+.
T Consensus 69 ~vi~~a~~~~~----~~~~~~~~~~~~~N~~g~~~l~~a~~----~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~ 140 (311)
T 2p5y_A 69 HVSHQAAQASV----KVSVEDPVLDFEVNLLGGLNLLEACR----QYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPK 140 (311)
T ss_dssp EEEECCSCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHH----HTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC
T ss_pred EEEECccccCc----hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC
Confidence 99999996432 12456678899999999999999874 344679999999722111 1246
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
..|+.+|++.+.+++.++.++ |++++.+.||.+.+|..
T Consensus 141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~ 178 (311)
T 2p5y_A 141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQ 178 (311)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCC
Confidence 789999999999999998875 79999999999998864
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-23 Score=168.16 Aligned_cols=163 Identities=15% Similarity=0.137 Sum_probs=124.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+.+......+.+ .++.++.+|++|.+++.+++++. ++|
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~------~~D 90 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF------KPT 90 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc------CCC
Confidence 68999999999999999999999999999999654322111111 35888999999999998888753 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-----C------CChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----P------SVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----~------~~~~ 149 (202)
+|||+||..... +.++++ +++|+.++..+++++. +.+.++||++||.+.+... + +...
T Consensus 91 ~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~----~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~ 159 (330)
T 2pzm_A 91 HVVHSAAAYKDP-----DDWAED--AATNVQGSINVAKAAS----KAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTS 159 (330)
T ss_dssp EEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHH----HHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSH
T ss_pred EEEECCccCCCc-----cccChh--HHHHHHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCCh
Confidence 999999975432 334555 9999999999999985 3346899999998765433 2 5678
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcE-EEEeeCCcccCCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIR-TNTVAPWVIKTSM 187 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~-v~~v~pG~v~t~~ 187 (202)
|+.+|++.+.+++.+ ++....+| ++.+.||. .+++
T Consensus 160 Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~ 195 (330)
T 2pzm_A 160 YGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGP 195 (330)
T ss_dssp HHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSH
T ss_pred HHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCH
Confidence 999999999999987 44334456 55666664 3443
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=162.09 Aligned_cols=169 Identities=21% Similarity=0.130 Sum_probs=128.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+|+||++++++|+++|++|+++.|+.+...+... +.+. ..++.++.+|++|.+++.++++
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------- 76 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK-------- 76 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT--------
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc--------
Confidence 689999999999999999999999999999998764433222 1111 1257889999999888776654
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-------------
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------- 144 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------- 144 (202)
.+|+|||+|+... .. ..+..+..+++|+.|+.++++++.+.. ..++||++||.++..+.
T Consensus 77 ~~d~Vih~A~~~~---~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E~~~~ 148 (337)
T 2c29_D 77 GCTGVFHVATPMD---FE--SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDESCWS 148 (337)
T ss_dssp TCSEEEECCCCCC---SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECTTCCC
T ss_pred CCCEEEEeccccC---CC--CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCcccCC
Confidence 4799999998542 11 122345688999999999999886532 25799999998754321
Q ss_pred ---------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 145 ---------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 145 ---------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++...|+.||.+.+.+++.++.+. |++++.+.||++.+|...
T Consensus 149 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~ 199 (337)
T 2c29_D 149 DMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN---NIDFITIIPTLVVGPFIM 199 (337)
T ss_dssp CHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH---TCCEEEEEECEEESCCSC
T ss_pred chhhhcccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCC
Confidence 123469999999999988776543 799999999999998653
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-23 Score=165.98 Aligned_cols=162 Identities=22% Similarity=0.210 Sum_probs=129.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+.+...... ...+.++.+|++|.+ +.++++ . |
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~Dl~d~~-~~~~~~--------~-d 64 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV------NPSAELHVRDLKDYS-WGAGIK--------G-D 64 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS------CTTSEEECCCTTSTT-TTTTCC--------C-S
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc------CCCceEEECccccHH-HHhhcC--------C-C
Confidence 78999999999999999999999999999999765432221 345788899999976 443322 2 9
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CCCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~~ 149 (202)
+|||+||.... ..+.++++..+++|+.++..+++++ ++.+.+++|++||...+. +..+...
T Consensus 65 ~vih~A~~~~~----~~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~ 136 (312)
T 3ko8_A 65 VVFHFAANPEV----RLSTTEPIVHFNENVVATFNVLEWA----RQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISV 136 (312)
T ss_dssp EEEECCSSCSS----SGGGSCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred EEEECCCCCCc----hhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence 99999996432 2355667888999999999999988 334567999999976542 2335678
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+.+|.+.+.+++.++.++ |++++.+.||++.+|...
T Consensus 137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~ 173 (312)
T 3ko8_A 137 YGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLR 173 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCC
T ss_pred HHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCC
Confidence 9999999999999999887 799999999999998643
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=161.65 Aligned_cols=169 Identities=18% Similarity=0.132 Sum_probs=126.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++|++|++++|.........+.+.. .+.++.++.+|++|.+++.++++. .++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~------~~~ 74 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHD------HAI 74 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHH------TTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhc------cCC
Confidence 6899999999999999999999999999988643211111122221 134578889999999998888764 258
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CC-CCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GI-PSV 147 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~-~~~ 147 (202)
|+|||+||..... ...++++..+++|+.++..+++++ ++.+.++||++||.+.+. +. |+.
T Consensus 75 D~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~ 146 (338)
T 1udb_A 75 DTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQ 146 (338)
T ss_dssp SEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCS
T ss_pred CEEEECCccCccc----cchhcHHHHHHHHHHHHHHHHHHH----HhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCC
Confidence 9999999964321 123456778999999999998875 444567999999976432 11 236
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
..|+.+|++.+.+++.++.+. .|+++..+.|+.+..
T Consensus 147 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G 182 (338)
T 1udb_A 147 SPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVG 182 (338)
T ss_dssp SHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEEC
T ss_pred ChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecC
Confidence 789999999999999998874 378998888876643
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=162.68 Aligned_cols=169 Identities=18% Similarity=0.156 Sum_probs=135.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-----CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-----FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-----~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||+|+||++++++|+++|++|++++|+..........+.... .++.++.+|++|.+++.++++
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 99 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK------ 99 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT------
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc------
Confidence 689999999999999999999999999999997654444444443321 468999999999888776654
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC----------
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP---------- 145 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~---------- 145 (202)
.+|+|||+||.... ..+.+++...+++|+.++..+++++ ++.+.+++|++||...+...+
T Consensus 100 --~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~ 169 (351)
T 3ruf_A 100 --GVDHVLHQAALGSV----PRSIVDPITTNATNITGFLNILHAA----KNAQVQSFTYAASSSTYGDHPALPKVEENIG 169 (351)
T ss_dssp --TCSEEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred --CCCEEEECCccCCc----chhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEecHHhcCCCCCCCCccCCCC
Confidence 58999999996432 1245567788999999999999987 444567999999986553322
Q ss_pred -CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 146 -SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 146 -~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+...|+.+|.+.+.+++.++.+. |++++.+.||++..+..
T Consensus 170 ~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 210 (351)
T 3ruf_A 170 NPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQ 210 (351)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTC
T ss_pred CCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCC
Confidence 35689999999999999998876 79999999999987754
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.6e-22 Score=160.87 Aligned_cols=164 Identities=16% Similarity=0.148 Sum_probs=131.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+..... +. ...++.++.+|++|.+++.+++++ .++|
T Consensus 2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~---~~~~~~~~~~D~~~~~~~~~~~~~------~~~d 69 (330)
T 2c20_A 2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DA---ITEGAKFYNGDLRDKAFLRDVFTQ------ENIE 69 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GG---SCTTSEEEECCTTCHHHHHHHHHH------SCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hh---cCCCcEEEECCCCCHHHHHHHHhh------cCCC
Confidence 68999999999999999999999999999998754322 11 112578889999999998888775 3799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 149 (202)
+|||+||..... .+.++++..+++|+.++..+++++ .+.+.+++|++||...+.. ..+...
T Consensus 70 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~ 141 (330)
T 2c20_A 70 AVMHFAADSLVG----VSMEKPLQYYNNNVYGALCLLEVM----DEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT 141 (330)
T ss_dssp EEEECCCCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred EEEECCcccCcc----ccccCHHHHHHHHhHHHHHHHHHH----HHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence 999999965321 134567889999999999999987 4445679999999765432 124578
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
|+.+|.+.+.+++.++.++ |++++.+.||++..+.
T Consensus 142 Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~ 176 (330)
T 2c20_A 142 YGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGAT 176 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCC
Confidence 9999999999999998764 7999999999998764
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=163.93 Aligned_cols=160 Identities=13% Similarity=0.110 Sum_probs=124.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|++++.... .. .++.++.+|++|.+++.++++ .+|
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~Dl~d~~~~~~~~~--------~~d 79 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--LEPECRVAEMLDHAGLERALR--------GLD 79 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--GCCEEEECCTTCHHHHHHHTT--------TCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--CCeEEEEecCCCHHHHHHHHc--------CCC
Confidence 4799999999999999999999999999999987654321 11 257788999999888776654 489
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCC--------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-------------- 146 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-------------- 146 (202)
+|||+||... ...+++++.+++|+.++..+++++.+ .+.+++|++||...+...++
T Consensus 80 ~vih~a~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~ 149 (342)
T 2x4g_A 80 GVIFSAGYYP------SRPRRWQEEVASALGQTNPFYAACLQ----ARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP 149 (342)
T ss_dssp EEEEC------------------CHHHHHHHHHHHHHHHHHH----HTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred EEEECCccCc------CCCCCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence 9999999643 23456788999999999999999855 34679999999876654433
Q ss_pred --ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 147 --VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 147 --~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
...|+.+|.+.+.+++.++. + |++++.+.||++.++..
T Consensus 150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~ 189 (342)
T 2x4g_A 150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELD 189 (342)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCC
T ss_pred cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCC
Confidence 67899999999999999876 3 89999999999998865
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.6e-23 Score=159.74 Aligned_cols=154 Identities=21% Similarity=0.226 Sum_probs=125.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|++++.. ...+.++.+|++|.+++.++++ .+|
T Consensus 3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~--------~~d 65 (267)
T 3ay3_A 3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK--------DCD 65 (267)
T ss_dssp EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT--------TCS
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc--------CCC
Confidence 47999999999999999999999999999999875311 1246888999999888777664 489
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC------------CCh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP------------SVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~ 148 (202)
+|||+||... .++++..+++|+.++..+++++.+ .+.++||++||...+...+ +..
T Consensus 66 ~vi~~a~~~~--------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~ 133 (267)
T 3ay3_A 66 GIIHLGGVSV--------ERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS 133 (267)
T ss_dssp EEEECCSCCS--------CCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred EEEECCcCCC--------CCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence 9999999751 234678899999999999998843 4567999999987654332 357
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcc-cCC
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVI-KTS 186 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v-~t~ 186 (202)
.|+.+|++.+.+++.++.+ .|++++.+.||++ .++
T Consensus 134 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~ 169 (267)
T 3ay3_A 134 LYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKP 169 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSC
T ss_pred hHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCC
Confidence 8999999999999988643 5899999999998 444
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=8.1e-22 Score=160.44 Aligned_cols=171 Identities=18% Similarity=0.078 Sum_probs=124.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHHh----cCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-ARLHEWKN----KGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~----~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+.. .+.++.++.+|++|.+++.++++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---- 77 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc----
Confidence 68999999999999999999999999999999865421 11122211 1346888999999999998888753
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------C
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------I 144 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~ 144 (202)
++|+|||+||..... .+.++++..+++|+.++..+++++.+...+ +.+++|++||.+.+.. .
T Consensus 78 --~~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~~~~ 150 (372)
T 1db3_A 78 --QPDEVYNLGAMSHVA----VSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKETTPF 150 (372)
T ss_dssp --CCSEEEECCCCCTTT----TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred --CCCEEEECCcccCcc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence 589999999975322 234567788999999999999998665432 2379999999764432 2
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
.+...|+.+|++.+.+++.++.++ |+.+..+.|..+..
T Consensus 151 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~g 188 (372)
T 1db3_A 151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHES 188 (372)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEEC
T ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccC
Confidence 346789999999999999999876 46555555554433
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.89 E-value=2e-22 Score=160.96 Aligned_cols=169 Identities=17% Similarity=0.075 Sum_probs=120.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeC-ChhHHHHH--HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSR-NQIELDAR--LHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r-~~~~~~~~--~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+|+||++++++|+++|++|+++.| +++..... ...+.....++.++.+|++|.++++++++
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------- 73 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE-------- 73 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT--------
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc--------
Confidence 68999999999999999999999999999988 65321111 11111011257788999999988777664
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHH-HHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC-----------
Q 028868 78 KLNILINNAAIAFVKPTVDITAED-MSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----------- 145 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------- 145 (202)
.+|+|||+|+.. . .+.++ ++..+++|+.|+.++++++.+.. +.++||++||.++..+.+
T Consensus 74 ~~d~vih~A~~~---~---~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~e~~~ 144 (322)
T 2p4h_X 74 GCVGIFHTASPI---D---FAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLDESDW 144 (322)
T ss_dssp TCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEECTTCC
T ss_pred CCCEEEEcCCcc---c---CCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecCCccc
Confidence 479999999632 1 12222 35689999999999999985431 357999999987543221
Q ss_pred -----------CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 146 -----------SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 146 -----------~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
....|+.||.+.+.+++.++.+ .|++++.+.||++.+|+..
T Consensus 145 ~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~ 196 (322)
T 2p4h_X 145 SDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVC 196 (322)
T ss_dssp CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCS
T ss_pred cchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCC
Confidence 1116999999888877766543 5899999999999998754
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-22 Score=154.33 Aligned_cols=156 Identities=13% Similarity=0.123 Sum_probs=124.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|++++.... ...+.++.+|++|.+++.++++ .+|
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~--------~~d 69 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK--------GAD 69 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT--------TCS
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc--------CCC
Confidence 5899999999999999999999999999999998664322 2468999999999988877765 479
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC----------CChhh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----------SVSLY 150 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~y 150 (202)
+|||+||..... ...+++|+.++..+++++ ++.+.+++|++||.....+.+ +...|
T Consensus 70 ~vi~~a~~~~~~----------~~~~~~n~~~~~~l~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y 135 (227)
T 3dhn_A 70 AVISAFNPGWNN----------PDIYDETIKVYLTIIDGV----KKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL 135 (227)
T ss_dssp EEEECCCC----------------CCSHHHHHHHHHHHHH----HHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred EEEEeCcCCCCC----------hhHHHHHHHHHHHHHHHH----HHhCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence 999999864211 126778999999988887 444567999999987665432 36789
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+.+|.+.+.+.+.++.+ .|++++.+.||++.++..
T Consensus 136 ~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~ 170 (227)
T 3dhn_A 136 PGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGV 170 (227)
T ss_dssp HHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCC
T ss_pred HHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCc
Confidence 99999999988877653 589999999999987653
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=8.6e-22 Score=160.70 Aligned_cols=172 Identities=19% Similarity=0.055 Sum_probs=129.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||+|+||++++++|+++|++|++++|+.+. ++...+.... .+.++.++.+|++|.+++.++++..
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 101 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--- 101 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence 579999999999999999999999999999997543 2211111100 1346888999999999988888753
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------- 143 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------- 143 (202)
++|+|||+||..... .+.++++..+++|+.++..+++++.+...+ +.++||++||.+.+..
T Consensus 102 ---~~d~vih~A~~~~~~----~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~E~~~ 173 (375)
T 1t2a_A 102 ---KPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETTP 173 (375)
T ss_dssp ---CCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred ---CCCEEEECCCccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-ccceEEEecchhhhCCCCCCCCCccCC
Confidence 589999999964321 234667889999999999999998664431 1379999999765432
Q ss_pred CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
..+...|+.+|++.+.+++.++.++ |+.+..+.|+.+..|
T Consensus 174 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp 213 (375)
T 1t2a_A 174 FYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP 213 (375)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCC
Confidence 2246789999999999999998875 577777777766544
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.6e-22 Score=160.59 Aligned_cols=168 Identities=19% Similarity=0.127 Sum_probs=130.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHC---C---CEEEEEeCChhHH-HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARF---G---AIVHTCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~---g---~~Vi~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++|||||+|+||++++++|+++ | ++|++++|+.... ....+.+. .+.++.++.+|++|.+++.+++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~----- 74 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFVHGDIRDAGLLAREL----- 74 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence 68999999999999999999997 8 9999999864210 01111111 1346889999999988877665
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------- 142 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------- 142 (202)
.++|+|||+||.... +.+.++++..+++|+.++..+++++.+. +.++||++||.+.+.
T Consensus 75 ---~~~d~Vih~A~~~~~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~ 143 (337)
T 1r6d_A 75 ---RGVDAIVHFAAESHV----DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTESS 143 (337)
T ss_dssp ---TTCCEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred ---cCCCEEEECCCccCc----hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCCC
Confidence 368999999996431 1234566788999999999999998553 457999999975432
Q ss_pred CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 143 ~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+..+...|+.+|.+.+.+++.++.++ |++++.+.||++.++..
T Consensus 144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~ 186 (337)
T 1r6d_A 144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ 186 (337)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCC
Confidence 23456789999999999999998875 79999999999998764
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.9e-22 Score=163.21 Aligned_cols=164 Identities=18% Similarity=0.081 Sum_probs=130.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+.+..... ...++.++.+|++|.+++.++++ .+|
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~--------~~d 95 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE--------GVD 95 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT--------TCS
T ss_pred CeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC--------CCC
Confidence 5899999999999999999999999999999986543211 12357788999999988777663 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc------------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------------ 142 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------------ 142 (202)
+|||+||....... ..++++..+++|+.++..+++++. +.+.+++|++||...+.
T Consensus 96 ~Vih~A~~~~~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~----~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~ 168 (379)
T 2c5a_A 96 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAAR----INGIKRFFYASSACIYPEFKQLETTNVSLKESDAW 168 (379)
T ss_dssp EEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHHH----HTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred EEEECceecCcccc---cccCHHHHHHHHHHHHHHHHHHHH----HcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC
Confidence 99999996532111 134577889999999999999883 34567999999976443
Q ss_pred CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 143 ~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+..+...|+.+|.+.+.+++.++.++ |++++.+.||++.++..
T Consensus 169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~ 211 (379)
T 2c5a_A 169 PAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFG 211 (379)
T ss_dssp SBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCC
Confidence 22346789999999999999998775 79999999999998754
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-22 Score=159.79 Aligned_cols=161 Identities=20% Similarity=0.176 Sum_probs=125.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|+.|++..++...... ....+.++.+|+++ +++.++++ .+|
T Consensus 2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-------~~~~~~~~~~Dl~~-~~~~~~~~--------~~d 65 (313)
T 3ehe_A 2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-------VNEAARLVKADLAA-DDIKDYLK--------GAE 65 (313)
T ss_dssp -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-------SCTTEEEECCCTTT-SCCHHHHT--------TCS
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-------cCCCcEEEECcCCh-HHHHHHhc--------CCC
Confidence 579999999999999999999999555555554432211 13458889999998 77766554 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CCCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~~ 149 (202)
.|||+|+... ...+.++++..+++|+.++..+++++ .+.+.+++|++||...+. +..+...
T Consensus 66 ~vih~a~~~~----~~~~~~~~~~~~~~nv~~~~~l~~~~----~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~ 137 (313)
T 3ehe_A 66 EVWHIAANPD----VRIGAENPDEIYRNNVLATYRLLEAM----RKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL 137 (313)
T ss_dssp EEEECCCCCC----CC-CCCCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred EEEECCCCCC----hhhhhhCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence 9999999542 22345668889999999999999886 444567999999976542 3345678
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
|+.+|.+.+.+++.++.++ |++++.+.|+.+.+|..
T Consensus 138 Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 173 (313)
T 3ehe_A 138 YGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRS 173 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTC
T ss_pred HHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCC
Confidence 9999999999999999885 79999999999988754
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=157.54 Aligned_cols=151 Identities=21% Similarity=0.119 Sum_probs=125.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||.+++++|+++|++|++++|+++. .++.++.+|++|.+++.++++ .+|
T Consensus 20 ~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~--------~~d 79 (347)
T 4id9_A 20 HMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM--------GVS 79 (347)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT--------TCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh--------CCC
Confidence 579999999999999999999999999999998754 357889999999988776654 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-------------CCCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-------------GIPSV 147 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-------------~~~~~ 147 (202)
+|||+|+.... +.++++..+++|+.++..+++++ .+.+.++||++||...+. +..+.
T Consensus 80 ~vih~A~~~~~------~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~ 149 (347)
T 4id9_A 80 AVLHLGAFMSW------APADRDRMFAVNVEGTRRLLDAA----SAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPN 149 (347)
T ss_dssp EEEECCCCCCS------SGGGHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCC
T ss_pred EEEECCcccCc------chhhHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCC
Confidence 99999996532 33455899999999999999987 445567999999965432 23356
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCccc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIK 184 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~ 184 (202)
..|+.+|.+.+.+++.++.+. |++++.+.|+++.
T Consensus 150 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~ 183 (347)
T 4id9_A 150 SPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQ 183 (347)
T ss_dssp SHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEE
T ss_pred ChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEe
Confidence 789999999999999988874 7999999999998
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=160.88 Aligned_cols=167 Identities=20% Similarity=0.157 Sum_probs=130.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhH-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+|+||++++++|+++ |++|++++|+... .....+++ .+.++.++.+|++|.+++.++++
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------- 74 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------- 74 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT--------
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh--------
Confidence 57999999999999999999999 8999999986421 11111111 12468899999999988777664
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc---------------
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR--------------- 142 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--------------- 142 (202)
.+|+|||+||.... +.+.++++..+++|+.++..+++++.+. + .++|++||.+.+.
T Consensus 75 ~~d~vih~A~~~~~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~ 145 (348)
T 1oc2_A 75 KADAIVHYAAESHN----DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP 145 (348)
T ss_dssp TCSEEEECCSCCCH----HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred cCCEEEECCcccCc----cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence 35999999996531 1234567789999999999999998654 3 3999999975331
Q ss_pred --------CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 143 --------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 143 --------~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+.++...|+.+|.+.+.+++.++.++ |++++.+.||++.++...
T Consensus 146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~ 197 (348)
T 1oc2_A 146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQH 197 (348)
T ss_dssp TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCC
T ss_pred CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCC
Confidence 23356789999999999999998876 799999999999988753
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-22 Score=161.74 Aligned_cols=168 Identities=21% Similarity=0.188 Sum_probs=131.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-------CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-------AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-------~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++|||||+|+||++++++|+++| ++|++++|+.+.... ....++.++.+|++|.++++++++
T Consensus 15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~---- 84 (342)
T 2hrz_A 15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVE---- 84 (342)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHH----
T ss_pred CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHh----
Confidence 479999999999999999999999 899999997643221 134578899999999998887775
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCC-C------
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGI-P------ 145 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~-~------ 145 (202)
+++|+|||+||.... .+.++++..+++|+.|+..+++++.+...+. ..++||++||.+.+.+. +
T Consensus 85 ---~~~d~vih~A~~~~~-----~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~ 156 (342)
T 2hrz_A 85 ---ARPDVIFHLAAIVSG-----EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDE 156 (342)
T ss_dssp ---TCCSEEEECCCCCHH-----HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTT
T ss_pred ---cCCCEEEECCccCcc-----cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCC
Confidence 368999999996431 2456788999999999999999987644322 25799999998665432 1
Q ss_pred ----CChhhhhhHHHHHHHHHHHHHHH--ccCCcEEEEee--CCcccCC
Q 028868 146 ----SVSLYGAYKGAMNQLTKNLACEW--AKDNIRTNTVA--PWVIKTS 186 (202)
Q Consensus 146 ----~~~~y~asK~a~~~~~~~la~e~--~~~gi~v~~v~--pG~v~t~ 186 (202)
+...|+.+|++.+.+++.++.+. ....+|++.++ ||.+.++
T Consensus 157 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~ 205 (342)
T 2hrz_A 157 FHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAA 205 (342)
T ss_dssp CCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCS
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcch
Confidence 56789999999999999888764 22346777777 8876554
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=159.72 Aligned_cols=158 Identities=20% Similarity=0.081 Sum_probs=122.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||+|+||.+++++|+++|++|++++|+.+. +......+...+. ++.++.+|++|.+++.++++..
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 105 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--- 105 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence 589999999999999999999999999999997653 2222222111122 6888999999999998888753
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCCCcc----------C
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVR----------G 143 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~----------~ 143 (202)
++|+|||+||.... ..+.++++..+++|+.++..+++++.+...+ .+.++||++||.+.+. +
T Consensus 106 ---~~d~Vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~ 178 (381)
T 1n7h_A 106 ---KPDEVYNLAAQSHV----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 178 (381)
T ss_dssp ---CCSEEEECCSCCCH----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred ---CCCEEEECCcccCc----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence 68999999996432 1235678899999999999999999887643 2346999999976443 2
Q ss_pred CCCChhhhhhHHHHHHHHHHHHHHH
Q 028868 144 IPSVSLYGAYKGAMNQLTKNLACEW 168 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~~~~la~e~ 168 (202)
..+...|+.+|.+.+.+++.++.++
T Consensus 179 ~~~~~~Y~~sK~~~E~~~~~~~~~~ 203 (381)
T 1n7h_A 179 FHPRSPYAASKCAAHWYTVNYREAY 203 (381)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHh
Confidence 3456789999999999999998876
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=157.64 Aligned_cols=169 Identities=19% Similarity=0.068 Sum_probs=129.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++|++|++++|+.+... ...+.+. ...++.++.+|++|.+++.++++.. ++
T Consensus 15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~------~~ 87 (335)
T 1rpn_A 15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA------QP 87 (335)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH------CC
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc------CC
Confidence 67999999999999999999999999999999865421 1111211 2346888999999999998888753 58
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccCC-----------CCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRGI-----------PSV 147 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----------~~~ 147 (202)
|+|||+||..... .+.++++..+++|+.++..+++++.+ .+ .+++|++||.+.+... .+.
T Consensus 88 d~Vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~ 159 (335)
T 1rpn_A 88 QEVYNLAAQSFVG----ASWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPFYPR 159 (335)
T ss_dssp SEEEECCSCCCHH----HHTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred CEEEECccccchh----hhhhChHHHHHHHHHHHHHHHHHHHH----hCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCC
Confidence 9999999964311 11235678899999999999998844 23 3799999997654322 235
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
..|+.+|.+.+.+++.++.++ |+.+..+.|+.+..|.
T Consensus 160 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~ 196 (335)
T 1rpn_A 160 SPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPL 196 (335)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTT
T ss_pred ChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCC
Confidence 689999999999999998775 6888888888876653
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.6e-22 Score=158.91 Aligned_cols=170 Identities=16% Similarity=0.075 Sum_probs=128.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhH-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+|+||.+++++|+++| ++|+..+|.... .....+.+ ....++.++.+|++|.+++.++++. .
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~------~ 97 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKE------R 97 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHH------H
T ss_pred CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhh------c
Confidence 579999999999999999999999 688888875421 11111111 1124689999999999999988875 2
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC------------C
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------P 145 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~ 145 (202)
++|+|||+||..... ...++++..+++|+.++..+++++ ++.+.+++|++||...+... .
T Consensus 98 ~~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~ 169 (346)
T 4egb_A 98 DVQVIVNFAAESHVD----RSIENPIPFYDTNVIGTVTLLELV----KKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLA 169 (346)
T ss_dssp TCCEEEECCCCC-------------CHHHHHHTHHHHHHHHHH----HHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCC
T ss_pred CCCEEEECCcccchh----hhhhCHHHHHHHHHHHHHHHHHHH----HhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCC
Confidence 689999999975432 245667889999999999999988 44456789999997544332 1
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+...|+.+|.+.+.+++.++.+. |++++.+.||++.+|..
T Consensus 170 p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~ 209 (346)
T 4egb_A 170 PNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQ 209 (346)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred CCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCC
Confidence 34789999999999999998875 79999999999988754
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=146.51 Aligned_cols=150 Identities=19% Similarity=0.172 Sum_probs=114.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+++++.... ..++.++.+|++|.++ +.+ ..+|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~---------~~~-~~~d 64 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE---------ADL-DSVD 64 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH---------HHH-TTCS
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH---------hhc-ccCC
Confidence 67999999999999999999999999999999987665331 2358889999999877 223 5789
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCC--------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS-------------- 146 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~-------------- 146 (202)
+|||+||..+... . .+.|+.++..++++ +++.+ +++|++||..+....+.
T Consensus 65 ~vi~~ag~~~~~~----~-------~~~n~~~~~~l~~a----~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~ 128 (224)
T 3h2s_A 65 AVVDALSVPWGSG----R-------GYLHLDFATHLVSL----LRNSD-TLAVFILGSASLAMPGADHPMILDFPESAAS 128 (224)
T ss_dssp EEEECCCCCTTSS----C-------THHHHHHHHHHHHT----CTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG
T ss_pred EEEECCccCCCcc----h-------hhHHHHHHHHHHHH----HHHcC-CcEEEEecceeeccCCCCccccccCCCCCcc
Confidence 9999999762111 1 24577776555554 46666 89999999876654433
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
...|+.+|.+.+.+ + ......|++++.+.||++.++
T Consensus 129 ~~~y~~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~ 164 (224)
T 3h2s_A 129 QPWYDGALYQYYEY-Q---FLQMNANVNWIGISPSEAFPS 164 (224)
T ss_dssp STTHHHHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCC
T ss_pred chhhHHHHHHHHHH-H---HHHhcCCCcEEEEcCccccCC
Confidence 67899999988854 2 222356899999999999987
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.7e-21 Score=143.45 Aligned_cols=151 Identities=15% Similarity=0.082 Sum_probs=118.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|++++.... ...++.++.+|++|.+++.++++ .+|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~--------~~d 69 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA--------GQD 69 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT--------TCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc--------CCC
Confidence 5899999999999999999999999999999998654321 13468899999999988777654 479
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC----CChhhhhhHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----SVSLYGAYKGA 156 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----~~~~y~asK~a 156 (202)
+|||++|..... +. .++|+.++..+++++ ++.+.+++|++||.......+ +...|+.+|.+
T Consensus 70 ~vi~~a~~~~~~---~~--------~~~n~~~~~~~~~~~----~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~ 134 (206)
T 1hdo_A 70 AVIVLLGTRNDL---SP--------TTVMSEGARNIVAAM----KAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR 134 (206)
T ss_dssp EEEECCCCTTCC---SC--------CCHHHHHHHHHHHHH----HHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHH
T ss_pred EEEECccCCCCC---Cc--------cchHHHHHHHHHHHH----HHhCCCeEEEEeeeeeccCcccccccchhHHHHHHH
Confidence 999999975431 11 137788888887776 334567999999987655444 56789999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcc-cCCC
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVI-KTSM 187 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v-~t~~ 187 (202)
++.+.+ ..|++++.+.||++ .++.
T Consensus 135 ~e~~~~-------~~~i~~~~lrp~~~~~~~~ 159 (206)
T 1hdo_A 135 MHKVLR-------ESGLKYVAVMPPHIGDQPL 159 (206)
T ss_dssp HHHHHH-------HTCSEEEEECCSEEECCCC
T ss_pred HHHHHH-------hCCCCEEEEeCCcccCCCC
Confidence 999884 25899999999998 3443
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.4e-22 Score=163.90 Aligned_cols=164 Identities=13% Similarity=0.115 Sum_probs=124.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh---HHHHHHHHHHh---------cCCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI---ELDARLHEWKN---------KGFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~---~~~~~~~~~~~---------~~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|++|||||+|+||++++++|++.|++|++++|+++ ....+.+.+.. ...++.++.+|++|.+++.
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--- 146 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--- 146 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC---
T ss_pred CEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC---
Confidence 47999999999999999999999999999999876 33333333321 1356899999999988776
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC--------
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-------- 140 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~-------- 140 (202)
.+ ..+|+|||+||... ..++++..+++|+.++..+++++.+ +..++|++||...
T Consensus 147 -----~~-~~~d~Vih~A~~~~-------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~G~~~~~~~ 208 (427)
T 4f6c_A 147 -----LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDT 208 (427)
T ss_dssp -----CS-SCCSEEEECCCCC--------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGGGSEECSSC
T ss_pred -----Cc-CCCCEEEECCcccC-------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHhCCCccCCC
Confidence 23 68999999999753 2356788999999999999999855 3579999999876
Q ss_pred ----------ccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 141 ----------VRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 141 ----------~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
..+..+...|+.+|.+.+.+++.++. .|++++.+.||+|.++...
T Consensus 209 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~ 263 (427)
T 4f6c_A 209 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNG 263 (427)
T ss_dssp SCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSS
T ss_pred CCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCC
Confidence 00122567899999999999998653 5899999999999887654
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=157.74 Aligned_cols=158 Identities=16% Similarity=0.030 Sum_probs=120.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+......... .. .++.++.+|++|.++++++++. .++|
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~---~~-~~~~~~~~Dl~d~~~~~~~~~~------~~~D 91 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK---DH-PNLTFVEGSIADHALVNQLIGD------LQPD 91 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC---CC-TTEEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh---hc-CCceEEEEeCCCHHHHHHHHhc------cCCc
Confidence 679999999999999999999999999999997543211111 11 3588899999999998888775 3689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc----CC--------CCC-
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----GI--------PSV- 147 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----~~--------~~~- 147 (202)
+|||+||..... +.++++ +++|+.++..+++++.+ .+.++||++||.+.+. .. .+.
T Consensus 92 ~vih~A~~~~~~-----~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~ 160 (333)
T 2q1w_A 92 AVVHTAASYKDP-----DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPAN 160 (333)
T ss_dssp EEEECCCCCSCT-----TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTT
T ss_pred EEEECceecCCC-----ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCC
Confidence 999999975432 234444 89999999999999854 4467999999976543 21 234
Q ss_pred hhhhhhHHHHHHHHHH-HHHHHccCCcEEEEeeCCcccCCC
Q 028868 148 SLYGAYKGAMNQLTKN-LACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~-la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
..|+.+|++.+.+++. ++ .+..+.|+.+..|.
T Consensus 161 ~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~ 193 (333)
T 2q1w_A 161 SSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPR 193 (333)
T ss_dssp CHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTT
T ss_pred CchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcC
Confidence 7899999999999987 64 45667777666554
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-22 Score=161.50 Aligned_cols=169 Identities=20% Similarity=0.128 Sum_probs=122.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH--HHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR--LHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~--~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++|++|+++.|+.++.... ...+. ...++.++.+|++|.+++.++++ .
T Consensus 10 ~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--------~ 80 (338)
T 2rh8_A 10 KTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA--------G 80 (338)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT--------T
T ss_pred CEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc--------C
Confidence 6799999999999999999999999999988876542211 12232 23458889999999887776654 4
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC--------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-------------- 144 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------- 144 (202)
+|+|||+|+.... . ..+..++.+++|+.|+.++++++.+.. +.++||++||.++..+.
T Consensus 81 ~D~Vih~A~~~~~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~ 152 (338)
T 2rh8_A 81 CDFVFHVATPVHF---A--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEKNW 152 (338)
T ss_dssp CSEEEEESSCCCC--------------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTTTT
T ss_pred CCEEEEeCCccCC---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChhhc
Confidence 7999999985421 1 112234588999999999999885432 25799999997632100
Q ss_pred -------C---CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 145 -------P---SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 145 -------~---~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
| ....|+.||.+.+.+++.++.+. |++++.+.||.+.+|...
T Consensus 153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~~lrp~~v~Gp~~~ 204 (338)
T 2rh8_A 153 TDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN---NIDLITVIPTLMAGSSLT 204 (338)
T ss_dssp TCC-------CCCCCCTTSCCHHHHHHHHHHHHH---TCCEEEEEECEEESCCSS
T ss_pred cchhhccccCCccchHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCC
Confidence 0 11259999999999888776553 799999999999998654
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.87 E-value=2e-21 Score=154.42 Aligned_cols=161 Identities=19% Similarity=0.170 Sum_probs=129.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++ |++|++++|+..... +.. ++.++.+|++|.+++.+++++ .+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~---~~~~~~~D~~d~~~~~~~~~~------~~ 68 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN---SGPFEVVNALDFNQIEHLVEV------HK 68 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH---SSCEEECCTTCHHHHHHHHHH------TT
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC---CCceEEecCCCHHHHHHHHhh------cC
Confidence 57999999999999999999999 899999999865521 111 366889999999998888765 26
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC------------CC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------PS 146 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~ 146 (202)
+|+|||+||.... ...++++..+++|+.++..+++++. +.+.+++|++||...+... .+
T Consensus 69 ~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~ 139 (312)
T 2yy7_A 69 ITDIYLMAALLSA-----TAEKNPAFAWDLNMNSLFHVLNLAK----AKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEP 139 (312)
T ss_dssp CCEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----TTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCC
T ss_pred CCEEEECCccCCC-----chhhChHHHHHHHHHHHHHHHHHHH----HcCCCEEEEeccHHHhCCCCCCCCccccCcCCC
Confidence 8999999996421 1235678889999999999999873 3456799999998654331 23
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
...|+.+|.+.+.+++.++.++ |++++.+.||++..+.
T Consensus 140 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~ 177 (312)
T 2yy7_A 140 STVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWS 177 (312)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSS
T ss_pred CchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCC
Confidence 5689999999999999988775 7999999999998754
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=159.72 Aligned_cols=165 Identities=13% Similarity=0.040 Sum_probs=129.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++| ++|++++|+.+..... +. ...++.++.+|++|.+++.++++ .+
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~---l~-~~~~v~~~~~Dl~d~~~l~~~~~--------~~ 100 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN---VP-DHPAVRFSETSITDDALLASLQD--------EY 100 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG---SC-CCTTEEEECSCTTCHHHHHHCCS--------CC
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh---cc-CCCceEEEECCCCCHHHHHHHhh--------CC
Confidence 579999999999999999999999 9999999986432211 11 13468899999999887665543 68
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCc-----------c-----
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGV-----------R----- 142 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~-----------~----- 142 (202)
|+|||+||..... .+.++++..+++|+.++..+++++ ++. +.+++|++||...+ .
T Consensus 101 d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~ 172 (377)
T 2q1s_A 101 DYVFHLATYHGNQ----SSIHDPLADHENNTLTTLKLYERL----KHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIV 172 (377)
T ss_dssp SEEEECCCCSCHH----HHHHCHHHHHHHHTHHHHHHHHHH----TTCSSCCEEEEEEEC--------------CCCCCC
T ss_pred CEEEECCCccCch----hhhhCHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccc
Confidence 9999999964321 234567889999999999999987 444 46799999997532 1
Q ss_pred CC-CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 143 GI-PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 143 ~~-~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+. .+...|+.+|.+.+.+++.++.++ |++++.+.||++.++..
T Consensus 173 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~ 216 (377)
T 2q1s_A 173 SLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGE 216 (377)
T ss_dssp CSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred cccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCC
Confidence 22 456789999999999999998775 79999999999998765
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.86 E-value=6.6e-22 Score=160.74 Aligned_cols=165 Identities=18% Similarity=0.167 Sum_probs=122.5
Q ss_pred CEEEEecCCCchHHHHHHHHHH--CCCEEEEEeCChhHHHHHH-------HHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELAR--FGAIVHTCSRNQIELDARL-------HEWKNKGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~--~g~~Vi~~~r~~~~~~~~~-------~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
|++|||||+|+||++++++|++ +|++|++++|+........ ......+..+.++.+|++|.++++++
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---- 86 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL---- 86 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH----
T ss_pred CEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh----
Confidence 6899999999999999999999 9999999999764211100 00011234678999999999988776
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--------
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------- 143 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------- 143 (202)
.. .++|+|||+||.... +.++++..+++|+.++..+++++ ++.+ .+||++||...+..
T Consensus 87 --~~-~~~D~vih~A~~~~~------~~~~~~~~~~~Nv~gt~~ll~aa----~~~~-~~~V~~SS~~vyg~~~~~~~E~ 152 (362)
T 3sxp_A 87 --EK-LHFDYLFHQAAVSDT------TMLNQELVMKTNYQAFLNLLEIA----RSKK-AKVIYASSAGVYGNTKAPNVVG 152 (362)
T ss_dssp --TT-SCCSEEEECCCCCGG------GCCCHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEEEEGGGGCSCCSSBCTT
T ss_pred --hc-cCCCEEEECCccCCc------cccCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEeCcHHHhCCCCCCCCCC
Confidence 12 579999999995432 33567889999999999999988 4333 45999999553322
Q ss_pred --CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 144 --IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 144 --~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
..+...|+.+|.+.+.+++.++.+ +++..+.|+.+..|..
T Consensus 153 ~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~ 194 (362)
T 3sxp_A 153 KNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPRE 194 (362)
T ss_dssp SCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTC
T ss_pred CCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCC
Confidence 123456999999999999988765 6677777777766543
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.6e-21 Score=153.38 Aligned_cols=163 Identities=17% Similarity=0.086 Sum_probs=126.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCH-HHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR-EQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~-~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++ |++|++++|+.++..... ...++.++.+|++|. +.++++++ .
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--------~ 67 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K 67 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH--------H
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc--------C
Confidence 68999999999999999999998 899999999876543221 123588899999984 55665554 3
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC-------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP------------- 145 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------- 145 (202)
+|+|||+||..... ...++++..+++|+.++..+++++. +.+ +++|++||...+...+
T Consensus 68 ~d~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~ 138 (345)
T 2bll_A 68 CDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCV----KYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV 138 (345)
T ss_dssp CSEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHH----HTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred CCEEEEcccccCcc----chhcCHHHHHHHHHHHHHHHHHHHH----HhC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence 69999999964321 1234567889999999999988873 344 7999999975432211
Q ss_pred -----CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 146 -----SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 146 -----~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+...|+.+|.+.+.+++.++.+. |++++.+.||++.++..
T Consensus 139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 183 (345)
T 2bll_A 139 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL 183 (345)
T ss_dssp CCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSC
T ss_pred CcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCc
Confidence 22379999999999999998775 79999999999987764
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.85 E-value=9.7e-21 Score=145.37 Aligned_cols=142 Identities=12% Similarity=0.097 Sum_probs=104.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++| ++|++++|+++++... ...++.++.+|++|.++++++++ .+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~--------~~ 89 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ--------GQ 89 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT--------TC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc--------CC
Confidence 579999999999999999999999 8999999998765332 12368899999999998887765 47
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC------------
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV------------ 147 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~------------ 147 (202)
|+||||+|.. .. ...++.+++.|++++.++||++||.....+.++.
T Consensus 90 D~vv~~a~~~--------~~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~ 147 (236)
T 3qvo_A 90 DIVYANLTGE--------DL--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEP 147 (236)
T ss_dssp SEEEEECCST--------TH--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGG
T ss_pred CEEEEcCCCC--------ch--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccch
Confidence 9999999851 11 1235577788888778899999998876654432
Q ss_pred -hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 148 -SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 148 -~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
..|..++ ..+.+.|++++.|+||++.++...
T Consensus 148 ~~~~~~~~-----------~~l~~~gi~~~~vrPg~i~~~~~~ 179 (236)
T 3qvo_A 148 LKPFRRAA-----------DAIEASGLEYTILRPAWLTDEDII 179 (236)
T ss_dssp GHHHHHHH-----------HHHHTSCSEEEEEEECEEECCSCC
T ss_pred HHHHHHHH-----------HHHHHCCCCEEEEeCCcccCCCCc
Confidence 2232222 223467999999999999987654
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.4e-20 Score=142.42 Aligned_cols=149 Identities=15% Similarity=0.159 Sum_probs=110.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+++++.... .++.++.+|++|.++ +.+ ..+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~---------~~~-~~~d 63 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL---------SDL-SDQN 63 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH---------HHH-TTCS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh---------hhh-cCCC
Confidence 68999999999999999999999999999999987655432 357889999999877 223 4689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC------------CCh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP------------SVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~------------~~~ 148 (202)
+|||++|.... ....|+.++..++++ +++.+.+++|++||..+..+.+ +..
T Consensus 64 ~vi~~ag~~~~-------------~~~~~~~~~~~l~~a----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~ 126 (221)
T 3ew7_A 64 VVVDAYGISPD-------------EAEKHVTSLDHLISV----LNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAP 126 (221)
T ss_dssp EEEECCCSSTT-------------TTTSHHHHHHHHHHH----HCSCCSSEEEEECCCC-------------------CC
T ss_pred EEEECCcCCcc-------------ccchHHHHHHHHHHH----HHhcCCceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence 99999997421 022456655555554 4666678999999987765433 245
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.|+.+|.+.+.+. .+.. ...|++++.+.||++.++
T Consensus 127 ~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~ 161 (221)
T 3ew7_A 127 YYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEP 161 (221)
T ss_dssp CSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCC
T ss_pred HHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecC
Confidence 6999999998862 2222 156899999999999887
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4.5e-21 Score=152.80 Aligned_cols=153 Identities=18% Similarity=0.171 Sum_probs=94.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+.+. . + ++.+|++|.+++.++++.. ++|
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~------~~d 62 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF------QPH 62 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH------CCS
T ss_pred CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh------CCC
Confidence 689999999999999999999999999999987543 0 1 6778999998888887753 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC----------CCCChhh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------IPSVSLY 150 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------~~~~~~y 150 (202)
+|||+||..... .+.++++..+++|+.++..+++++.+ .+ +++|++||...+.+ ..+...|
T Consensus 63 ~vih~A~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y 133 (315)
T 2ydy_A 63 VIVHCAAERRPD----VVENQPDAASQLNVDASGNLAKEAAA----VG-AFLIYISSDYVFDGTNPPYREEDIPAPLNLY 133 (315)
T ss_dssp EEEECC-----------------------CHHHHHHHHHHHH----HT-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSHH
T ss_pred EEEECCcccChh----hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchHHHcCCCCCCCCCCCCCCCcCHH
Confidence 999999975321 24567889999999999999999854 23 49999999876543 3456789
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
+.+|.+.+.+++.++.++ ..+|++.|+ |+..+
T Consensus 134 ~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~ 165 (315)
T 2ydy_A 134 GKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEK 165 (315)
T ss_dssp HHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSS
T ss_pred HHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCc
Confidence 999999999999875443 245666666 55554
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=9.2e-22 Score=148.49 Aligned_cols=150 Identities=13% Similarity=0.149 Sum_probs=120.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|+||++++++|+++|+ +|++++|++++ ...++.++.+|++|.+++.+++
T Consensus 6 ~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~---------- 65 (215)
T 2a35_A 6 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS---------- 65 (215)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC----------
T ss_pred ceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh----------
Confidence 5899999999999999999999998 99999998765 1235778888988776554433
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|+|||++|.... +.+++++.+++|+.++..+++++. +.+.+++|++||.....+ +...|+.+|.+++
T Consensus 66 ~d~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e 133 (215)
T 2a35_A 66 IDTAFCCLGTTIK------EAGSEEAFRAVDFDLPLAVGKRAL----EMGARHYLVVSALGADAK--SSIFYNRVKGELE 133 (215)
T ss_dssp CSEEEECCCCCHH------HHSSHHHHHHHHTHHHHHHHHHHH----HTTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred hcEEEECeeeccc------cCCCHHHHHHhhHHHHHHHHHHHH----HcCCCEEEEECCcccCCC--CccHHHHHHHHHH
Confidence 7999999996421 234677889999999999999873 345679999999876543 3468999999999
Q ss_pred HHHHHHHHHHccCCcE-EEEeeCCcccCCCcc
Q 028868 159 QLTKNLACEWAKDNIR-TNTVAPWVIKTSMIK 189 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~-v~~v~pG~v~t~~~~ 189 (202)
.+++. .|++ ++.+.||++.++...
T Consensus 134 ~~~~~-------~~~~~~~~vrp~~v~g~~~~ 158 (215)
T 2a35_A 134 QALQE-------QGWPQLTIARPSLLFGPREE 158 (215)
T ss_dssp HHHTT-------SCCSEEEEEECCSEESTTSC
T ss_pred HHHHH-------cCCCeEEEEeCceeeCCCCc
Confidence 98874 3898 999999999988643
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.85 E-value=9.7e-21 Score=154.23 Aligned_cols=163 Identities=17% Similarity=0.127 Sum_probs=129.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCC-CHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS-SREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~-~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++ |++|++++|+.++...... ..++.++.+|++ |.+++.++++ .
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~--------~ 91 (372)
T 3slg_A 25 KKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK--------K 91 (372)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH--------H
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc--------c
Confidence 68999999999999999999998 9999999998765443321 246899999999 9888888776 3
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC--------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-------------- 144 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------- 144 (202)
+|+|||+|+..... ...++....+++|+.++..+++++ ++.+ .++|++||...+...
T Consensus 92 ~d~Vih~A~~~~~~----~~~~~~~~~~~~nv~~~~~ll~a~----~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 162 (372)
T 3slg_A 92 CDVILPLVAIATPA----TYVKQPLRVFELDFEANLPIVRSA----VKYG-KHLVFPSTSEVYGMCADEQFDPDASALTY 162 (372)
T ss_dssp CSEEEECBCCCCHH----HHHHCHHHHHHHHTTTTHHHHHHH----HHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEEE
T ss_pred CCEEEEcCccccHH----HHhhCHHHHHHHHHHHHHHHHHHH----HHhC-CcEEEeCcHHHhCCCCCCCCCcccccccc
Confidence 79999999975421 123456788899999999998887 3344 799999996533221
Q ss_pred ----CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 145 ----PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 145 ----~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
.+...|+.+|.+.+.+++.++.+ |++++.+.|+.+..|...
T Consensus 163 ~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~ 207 (372)
T 3slg_A 163 GPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLD 207 (372)
T ss_dssp CCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCC
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcc
Confidence 23447999999999999988765 799999999999877643
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=150.24 Aligned_cols=155 Identities=18% Similarity=0.179 Sum_probs=124.2
Q ss_pred EEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 2 TALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++|||||+|+||++++++|+++ |++|++++|+..... .+.++.+|++|.+++.++++. .++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~------~~~ 63 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEK------YSI 63 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHH------TTC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhh------cCC
Confidence 4899999999999999999998 899999998754321 356788999999998888775 368
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC------------CCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------PSV 147 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~~~ 147 (202)
|+|||+|+.... ...++++..+++|+.++..+++++. +.+.+++|++||...+.+. .+.
T Consensus 64 d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~ 134 (317)
T 3ajr_A 64 DAIFHLAGILSA-----KGEKDPALAYKVNMNGTYNILEAAK----QHRVEKVVIPSTIGVFGPETPKNKVPSITITRPR 134 (317)
T ss_dssp CEEEECCCCCHH-----HHHHCHHHHHHHHHHHHHHHHHHHH----HTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred cEEEECCcccCC-----ccccChHHHhhhhhHHHHHHHHHHH----HcCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence 999999996421 1235678889999999999999874 3456799999998765432 136
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
..|+.+|.+.+.+++.++.+. |++++.+.|+.+..
T Consensus 135 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g 169 (317)
T 3ajr_A 135 TMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIIS 169 (317)
T ss_dssp SHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEEC
T ss_pred chHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEec
Confidence 789999999999999887664 79999998666654
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-20 Score=162.88 Aligned_cols=171 Identities=20% Similarity=0.142 Sum_probs=130.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++|++|++++|+........+.+.. .+.++.++.+|+++.+++.++++. -++
T Consensus 12 ~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~------~~~ 85 (699)
T 1z45_A 12 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKE------YKI 85 (699)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHH------SCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHh------CCC
Confidence 6899999999999999999999999999999875432222222221 134678899999999998888764 268
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC---------------C
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------------I 144 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------~ 144 (202)
|+|||+||...... ..+..++.+++|+.++..+++++ ++.+.++||++||.+.+.. .
T Consensus 86 D~Vih~A~~~~~~~----~~~~~~~~~~~Nv~gt~~ll~a~----~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~ 157 (699)
T 1z45_A 86 DSVIHFAGLKAVGE----STQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPL 157 (699)
T ss_dssp CEEEECCSCCCHHH----HHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC
T ss_pred CEEEECCcccCcCc----cccCHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECcHHHhCCCccccccCCccccCCC
Confidence 99999999753211 12334678899999999998776 4445679999999764321 1
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.+...|+.+|++++.+++.++.+. +.|+++..+.|+.+..+
T Consensus 158 ~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~ 198 (699)
T 1z45_A 158 GPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA 198 (699)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred CCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCC
Confidence 235689999999999999998775 35899999999887654
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-21 Score=157.19 Aligned_cols=164 Identities=14% Similarity=0.147 Sum_probs=126.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++| ++|++++|+..... ...+. . +. +.+|+++.++++++++. ..+ +++
T Consensus 47 ~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~--~~-~~~d~~~~~~~~~~~~~--~~~-~~~ 116 (357)
T 2x6t_A 47 RMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--D--LN-IADYMDKEDFLIQIMAG--EEF-GDV 116 (357)
T ss_dssp -CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT--T--SC-CSEEEEHHHHHHHHHTT--CCC-SSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc--C--ce-EeeecCcHHHHHHHHhh--ccc-CCC
Confidence 469999999999999999999999 89999999764421 11111 1 22 67899998888777653 123 479
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC-----------CCh
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-----------SVS 148 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~ 148 (202)
|+|||+||.... +.++++..+++|+.++..+++++.+ .+. ++|++||...+...+ +..
T Consensus 117 d~Vih~A~~~~~------~~~~~~~~~~~n~~~~~~ll~a~~~----~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~ 185 (357)
T 2x6t_A 117 EAIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLN 185 (357)
T ss_dssp CEEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGCSCSSCCCSSGGGCCCSS
T ss_pred CEEEECCcccCC------ccCCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEcchHHhCCCCCCCcCCcCCCCCCC
Confidence 999999997543 2234678899999999999999855 345 999999986543322 256
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.|+.+|.+.+.+++.++.+ .|++++.+.||++.+|..
T Consensus 186 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~ 222 (357)
T 2x6t_A 186 VFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE 222 (357)
T ss_dssp HHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred hhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCC
Confidence 8999999999999998776 379999999999988754
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.84 E-value=4e-20 Score=147.23 Aligned_cols=156 Identities=16% Similarity=0.101 Sum_probs=123.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|++.... .+ ++.++.+|++ .+++.++++ ++|
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~-------~~~~~~~Dl~-~~~~~~~~~--------~~d 64 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA--IN-------DYEYRVSDYT-LEDLINQLN--------DVD 64 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT--------TCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc--CC-------ceEEEEcccc-HHHHHHhhc--------CCC
Confidence 68999999999999999999999999999999844332 21 5788999999 887776654 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 149 (202)
+|||+|+..... +.+..+++|+.++..+++++ ++.+.+++|++||...+.. ..+...
T Consensus 65 ~Vih~a~~~~~~--------~~~~~~~~n~~~~~~ll~a~----~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~ 132 (311)
T 3m2p_A 65 AVVHLAATRGSQ--------GKISEFHDNEILTQNLYDAC----YENNISNIVYASTISAYSDETSLPWNEKELPLPDLM 132 (311)
T ss_dssp EEEECCCCCCSS--------SCGGGTHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSH
T ss_pred EEEEccccCCCC--------ChHHHHHHHHHHHHHHHHHH----HHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCch
Confidence 999999976432 33456789999999998887 4455678999999654422 123568
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+.+|.+.+.+++.++.+ .|++++.+.||.+..+...
T Consensus 133 Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~ 169 (311)
T 3m2p_A 133 YGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEK 169 (311)
T ss_dssp HHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC-
T ss_pred hHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCC
Confidence 999999999999988875 4899999999999887554
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.3e-20 Score=154.12 Aligned_cols=162 Identities=19% Similarity=0.166 Sum_probs=123.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHC---CCEEEEEeCChhHHHHHHHHHHh----------------cCCeEEEEEecCC--
Q 028868 1 MTALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEWKN----------------KGFKVTGSVCDLS-- 59 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~---g~~Vi~~~r~~~~~~~~~~~~~~----------------~~~~v~~~~~Dv~-- 59 (202)
|+||||||+|+||++++++|+++ |++|++++|+++...... .+.+ ...++.++.+|++
T Consensus 74 ~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~ 152 (478)
T 4dqv_A 74 RTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARR-RLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEP 152 (478)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHH-HHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSG
T ss_pred CEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHH-HHHHHHHhcchhhhhhhhhhccCceEEEEeECCCc
Confidence 68999999999999999999999 899999999875442221 1111 1357999999999
Q ss_pred ----CHHHHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEe
Q 028868 60 ----SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFI 135 (202)
Q Consensus 60 ----~~~~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~v 135 (202)
+.++++++++ .+|+|||+||.... +.++..+++|+.++..+++++ .+.+.+++|++
T Consensus 153 ~~gld~~~~~~~~~--------~~D~Vih~Aa~~~~--------~~~~~~~~~Nv~gt~~ll~aa----~~~~~~~~V~i 212 (478)
T 4dqv_A 153 DLGLDQPMWRRLAE--------TVDLIVDSAAMVNA--------FPYHELFGPNVAGTAELIRIA----LTTKLKPFTYV 212 (478)
T ss_dssp GGGCCHHHHHHHHH--------HCCEEEECCSSCSB--------SSCCEEHHHHHHHHHHHHHHH----TSSSCCCEEEE
T ss_pred ccCCCHHHHHHHHc--------CCCEEEECccccCC--------cCHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEE
Confidence 5555555554 47999999997643 223466789999999999987 44455799999
Q ss_pred cCCCCccCCCC----------------------ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 136 SSVGGVRGIPS----------------------VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 136 sS~~~~~~~~~----------------------~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
||.+.+..... ...|+.+|.+.+.+++.++.+. |++++.+.||+|..+
T Consensus 213 SS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~ 282 (478)
T 4dqv_A 213 STADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD 282 (478)
T ss_dssp EEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred eehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence 99654322111 1349999999999999988765 799999999999765
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=6.9e-20 Score=146.21 Aligned_cols=152 Identities=13% Similarity=0.076 Sum_probs=122.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+. .+|++|.+++.++++.. .+|
T Consensus 4 ~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~------~~d 57 (321)
T 1e6u_A 4 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE------RID 57 (321)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc------CCC
Confidence 4799999999999999999999999999988863 27999999888887652 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC----------------C
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------------I 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------~ 144 (202)
+|||+|+..... ....++.+..+++|+.++..+++++.+ .+.+++|++||...+.. .
T Consensus 58 ~vih~a~~~~~~---~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~ 130 (321)
T 1e6u_A 58 QVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE 130 (321)
T ss_dssp EEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC
T ss_pred EEEEcCeecCCc---chhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccCCCC
Confidence 999999964311 113455678899999999999998743 44579999999765421 1
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
|....|+.+|.+.+.+++.++.+. |++++.+.||++..+..
T Consensus 131 p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 171 (321)
T 1e6u_A 131 PTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD 171 (321)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCC
Confidence 113589999999999999998765 79999999999987754
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.9e-20 Score=147.51 Aligned_cols=164 Identities=15% Similarity=0.157 Sum_probs=123.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++|||||+|+||++++++|+++| ++|++++|++.... ...+.. +. +.+|+++.+.++++++... + +++|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~----~~-~~~d~~~~~~~~~~~~~~~--~-~~~d 70 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD----LN-IADYMDKEDFLIQIMAGEE--F-GDVE 70 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT----SC-CSEEEEHHHHHHHHHTTCC--C-SSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc----ce-eccccccHHHHHHHHhccc--c-CCCc
Confidence 48999999999999999999999 89999999765421 111221 12 6789998887776654210 1 2699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-----------CCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~ 149 (202)
+|||+||.... ..++++..+++|+.++..+++++.+ .+. ++|++||...+... .+...
T Consensus 71 ~vi~~a~~~~~------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~ 139 (310)
T 1eq2_A 71 AIFHEGACSST------TEWDGKYMMDNNYQYSKELLHYCLE----REI-PFLYASSAATYGGRTSDFIESREYEKPLNV 139 (310)
T ss_dssp EEEECCSCCCT------TCCCHHHHHHHTHHHHHHHHHHHHH----HTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred EEEECcccccC------cccCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence 99999997542 2234678899999999999998843 345 99999997644322 22568
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+.+|.+.+.+++.++.+ .|++++.+.||++.++...
T Consensus 140 Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~ 176 (310)
T 1eq2_A 140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREG 176 (310)
T ss_dssp HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCG
T ss_pred hHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCC
Confidence 999999999999988765 4899999999999887643
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.2e-20 Score=145.70 Aligned_cols=143 Identities=24% Similarity=0.179 Sum_probs=114.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+ .+|++|.+++.++++.. ++|
T Consensus 13 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~------~~d 65 (292)
T 1vl0_A 13 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK------KPN 65 (292)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH------CCS
T ss_pred ceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc------CCC
Confidence 579999999999999999999999999999996 27999999988887753 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC-----------CChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP-----------SVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~-----------~~~~ 149 (202)
+|||+||.... +.+.++++..+++|+.++..+++++.+ .+. ++|++||.+.+.+.+ +...
T Consensus 66 ~vih~A~~~~~----~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~ 136 (292)
T 1vl0_A 66 VVINCAAHTAV----DKCEEQYDLAYKINAIGPKNLAAAAYS----VGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSA 136 (292)
T ss_dssp EEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----HTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred EEEECCccCCH----HHHhcCHHHHHHHHHHHHHHHHHHHHH----cCC-eEEEechHHeECCCCCCCCCCCCCCCCccH
Confidence 99999996432 123467889999999999999999854 334 999999976543322 3578
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
|+.+|.+.+.+++.++. .+..+.|+.+..+
T Consensus 137 Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~ 166 (292)
T 1vl0_A 137 YGKTKLEGENFVKALNP-------KYYIVRTAWLYGD 166 (292)
T ss_dssp HHHHHHHHHHHHHHHCS-------SEEEEEECSEESS
T ss_pred HHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC
Confidence 99999999999987753 3566677776644
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.8e-20 Score=148.63 Aligned_cols=162 Identities=13% Similarity=0.067 Sum_probs=122.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|++|++++|+..........+. ...++.++.+|+.+.. + ..+|
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~------------~-~~~d 93 (343)
T 2b69_A 28 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL------------Y-IEVD 93 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC------------C-CCCS
T ss_pred CEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh------------h-cCCC
Confidence 679999999999999999999999999999986432211111111 1245888899998742 3 4699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc----------------CC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------------GI 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------------~~ 144 (202)
+|||+||....... .++++..+++|+.++..+++++.+ .+ .++|++||...+. +.
T Consensus 94 ~vih~A~~~~~~~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~ 164 (343)
T 2b69_A 94 QIYHLASPASPPNY----MYNPIKTLKTNTIGTLNMLGLAKR----VG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI 164 (343)
T ss_dssp EEEECCSCCSHHHH----TTCHHHHHHHHHHHHHHHHHHHHH----HT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred EEEECccccCchhh----hhCHHHHHHHHHHHHHHHHHHHHH----hC-CcEEEECcHHHhCCCCCCCCcccccccCCCC
Confidence 99999996532111 123567889999999999998843 23 4899999975432 22
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+...|+.+|.+.+.+++.++.+. |++++.+.||++.+|..
T Consensus 165 ~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~ 205 (343)
T 2b69_A 165 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM 205 (343)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCC
Confidence 345679999999999999988765 79999999999988753
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=156.63 Aligned_cols=163 Identities=15% Similarity=0.075 Sum_probs=126.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHH-HHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ-REKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~-i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++ |++|++++|+++...... ...++.++.+|++|.++ ++++++ .
T Consensus 316 ~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~--------~ 382 (660)
T 1z7e_A 316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK--------K 382 (660)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH--------H
T ss_pred ceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc--------C
Confidence 47999999999999999999998 899999999876543211 13468889999998654 544443 4
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC--------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-------------- 144 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-------------- 144 (202)
+|+|||+||..... ...++++..+++|+.++..+++++.+ .+ +++|++||...+...
T Consensus 383 ~D~Vih~Aa~~~~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~ 453 (660)
T 1z7e_A 383 CDVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV 453 (660)
T ss_dssp CSEEEECCCCCCTH----HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCSSSBCTTTCCEEE
T ss_pred CCEEEECceecCcc----ccccCHHHHHHhhhHHHHHHHHHHHH----hC-CEEEEEecHHHcCCCCCcccCCCcccccc
Confidence 79999999975321 12345678999999999999988743 34 799999997654221
Q ss_pred ----CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 ----PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ----~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+...|+.+|.+.+.+++.++.+. |++++.+.||++.++..
T Consensus 454 ~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~ 498 (660)
T 1z7e_A 454 GPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL 498 (660)
T ss_dssp CCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTS
T ss_pred CcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCc
Confidence 123479999999999999998775 79999999999988764
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=141.18 Aligned_cols=145 Identities=23% Similarity=0.181 Sum_probs=114.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+ +|++|++++|+++.. .+ +.+|++|.+++.++++.. ++|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~---------~~-----~~~Dl~~~~~~~~~~~~~------~~d 59 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ---------GG-----YKLDLTDFPRLEDFIIKK------RPD 59 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT---------TC-----EECCTTSHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC---------CC-----ceeccCCHHHHHHHHHhc------CCC
Confidence 579999999999999999999 589999999987421 11 789999999998888753 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC----------CChhh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----------SVSLY 150 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----------~~~~y 150 (202)
+|||+||.... +.+.++++..+++|+.++..+++++.+ .+ +++|++||...+.+.+ +...|
T Consensus 60 ~vi~~a~~~~~----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y 130 (273)
T 2ggs_A 60 VIINAAAMTDV----DKCEIEKEKAYKINAEAVRHIVRAGKV----ID-SYIVHISTDYVFDGEKGNYKEEDIPNPINYY 130 (273)
T ss_dssp EEEECCCCCCH----HHHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHH
T ss_pred EEEECCcccCh----hhhhhCHHHHHHHhHHHHHHHHHHHHH----hC-CeEEEEecceeEcCCCCCcCCCCCCCCCCHH
Confidence 99999997532 123567889999999999999999843 33 5999999987664432 35789
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEee
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVA 179 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~ 179 (202)
+.+|++++.+++. +....+|++.|+
T Consensus 131 ~~sK~~~e~~~~~----~~~~~iR~~~v~ 155 (273)
T 2ggs_A 131 GLSKLLGETFALQ----DDSLIIRTSGIF 155 (273)
T ss_dssp HHHHHHHHHHHCC----TTCEEEEECCCB
T ss_pred HHHHHHHHHHHhC----CCeEEEeccccc
Confidence 9999999999987 222345666665
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=1.4e-19 Score=143.00 Aligned_cols=148 Identities=17% Similarity=0.129 Sum_probs=117.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+ +|++|++++|++. .+.+|++|.+++.++++.. ++|
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~------~~d 56 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL------RPD 56 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH------CCS
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc------CCC
Confidence 689999999999999999999 8999999999861 3468999999888887652 589
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-----------CCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~~~ 149 (202)
+|||+||..... .+.++++..+++|+.++..+++++ ++.+ .++|++||...+.+. .+...
T Consensus 57 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~a~----~~~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~ 127 (299)
T 1n2s_A 57 VIVNAAAHTAVD----KAESEPELAQLLNATSVEAIAKAA----NETG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNV 127 (299)
T ss_dssp EEEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHH----TTTT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred EEEECcccCCHh----hhhcCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEecccEEeCCCCCCCCCCCCCCCccH
Confidence 999999964321 122456788899999999999988 3333 389999997654322 23568
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
|+.+|.+.+.+++.++. +++.+.||++.++..
T Consensus 128 Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~ 159 (299)
T 1n2s_A 128 YGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKG 159 (299)
T ss_dssp HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSS
T ss_pred HHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCc
Confidence 99999999999987642 789999999988754
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-18 Score=136.49 Aligned_cols=155 Identities=18% Similarity=0.041 Sum_probs=117.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||++++++|+++|+ +.. .....+..+.+|++|.+++.++++. .++|
T Consensus 7 ~~vlVtGatG~iG~~l~~~L~~~g~------~~~-----------~~~~~~~~~~~D~~d~~~~~~~~~~------~~~d 63 (319)
T 4b8w_A 7 MRILVTGGSGLVGKAIQKVVADGAG------LPG-----------EDWVFVSSKDADLTDTAQTRALFEK------VQPT 63 (319)
T ss_dssp CEEEEETCSSHHHHHHHHHHHTTTC------CTT-----------CEEEECCTTTCCTTSHHHHHHHHHH------SCCS
T ss_pred CeEEEECCCcHHHHHHHHHHHhcCC------ccc-----------ccccccCceecccCCHHHHHHHHhh------cCCC
Confidence 6899999999999999999999997 110 0011234457899999998888875 3699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC----------------C
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------------I 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------~ 144 (202)
+|||+|+..... ..+.++.+..+++|+.++..+++++ ++.+.+++|++||...+.. .
T Consensus 64 ~Vih~A~~~~~~---~~~~~~~~~~~~~nv~gt~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~ 136 (319)
T 4b8w_A 64 HVIHLAAMVGGL---FRNIKYNLDFWRKNVHMNDNVLHSA----FEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPH 136 (319)
T ss_dssp EEEECCCCCCCH---HHHTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCC
T ss_pred EEEECceecccc---cccccCHHHHHHHHHHHHHHHHHHH----HHcCCCeEEEEcchhhcCCCCCCCccccccccCCCC
Confidence 999999974311 1123445678899999999999887 4445679999999864321 1
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
|....|+.+|.+.+.+++.++.+. |++++.+.|+++..|..
T Consensus 137 p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~ 177 (319)
T 4b8w_A 137 NSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHD 177 (319)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTC
T ss_pred CCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCC
Confidence 222369999999999999998875 79999999999987754
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.79 E-value=2.3e-19 Score=141.08 Aligned_cols=144 Identities=19% Similarity=0.230 Sum_probs=115.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
++|||||+|+||++++++|+++|++|++++|. .+|++|.+++.++++.. ++|+
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~------~~d~ 59 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI------RPHI 59 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH------CCSE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc------CCCE
Confidence 89999999999999999999999999999992 37999999988888763 6899
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChhh
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSLY 150 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~y 150 (202)
|||+||..... ...++++..+++|+.++..+++++.+ .+ .++|++||...+.+ ..+...|
T Consensus 60 vi~~a~~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y 130 (287)
T 3sc6_A 60 IIHCAAYTKVD----QAEKERDLAYVINAIGARNVAVASQL----VG-AKLVYISTDYVFQGDRPEGYDEFHNPAPINIY 130 (287)
T ss_dssp EEECCCCCCHH----HHTTCHHHHHHHHTHHHHHHHHHHHH----HT-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred EEECCcccChH----HHhcCHHHHHHHHHHHHHHHHHHHHH----cC-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence 99999975421 12245788999999999999998833 33 38999999765422 2245789
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+.+|.+.+.+++.++. +++.+.|+.+..|..
T Consensus 131 ~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~ 161 (287)
T 3sc6_A 131 GASKYAGEQFVKELHN-------KYFIVRTSWLYGKYG 161 (287)
T ss_dssp HHHHHHHHHHHHHHCS-------SEEEEEECSEECSSS
T ss_pred HHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCC
Confidence 9999999999987643 457899999877643
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.79 E-value=1.5e-18 Score=136.34 Aligned_cols=145 Identities=14% Similarity=0.101 Sum_probs=115.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+++||||+|+||++++++|+++ |++|++++|++++..... . .++.++.+|++|.+++.++++ .
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~--------~ 66 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA--------G 66 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT--------T
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh--------c
Confidence 67999999999999999999999 999999999876654332 2 246788999999888776654 4
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|+|||+|+... . + ++|+.++..+++++ ++.+.+++|++||..... ....|+.+|.+.+
T Consensus 67 ~d~vi~~a~~~~-------~-~------~~n~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E 125 (287)
T 2jl1_A 67 VSKLLFISGPHY-------D-N------TLLIVQHANVVKAA----RDAGVKHIAYTGYAFAEE---SIIPLAHVHLATE 125 (287)
T ss_dssp CSEEEECCCCCS-------C-H------HHHHHHHHHHHHHH----HHTTCSEEEEEEETTGGG---CCSTHHHHHHHHH
T ss_pred CCEEEEcCCCCc-------C-c------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCCC---CCCchHHHHHHHH
Confidence 799999999521 1 1 57888988888877 445567999999987642 2247999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+.+. .|++++.+.||++.++.
T Consensus 126 ~~~~~-------~~~~~~ilrp~~~~~~~ 147 (287)
T 2jl1_A 126 YAIRT-------TNIPYTFLRNALYTDFF 147 (287)
T ss_dssp HHHHH-------TTCCEEEEEECCBHHHH
T ss_pred HHHHH-------cCCCeEEEECCEecccc
Confidence 98862 58999999999987654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.78 E-value=1e-18 Score=148.11 Aligned_cols=164 Identities=14% Similarity=0.102 Sum_probs=123.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH---HHHHHHHHH---------hcCCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE---LDARLHEWK---------NKGFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~---~~~~~~~~~---------~~~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|+||||||+|+||.+++++|.+.|++|+.++|+.+. .....+.+. ....++.++.+|+++.+++.
T Consensus 151 ~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--- 227 (508)
T 4f6l_B 151 GNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--- 227 (508)
T ss_dssp EEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC---
T ss_pred CeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC---
Confidence 579999999999999999999999999999998763 222222221 12457999999999977766
Q ss_pred HHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC--cc----
Q 028868 69 ETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG--VR---- 142 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~--~~---- 142 (202)
.. ..+|+|||+|+... ....++..+++|+.++..+++++.+ +..++|++||... ..
T Consensus 228 -----~~-~~~D~Vih~Aa~~~-------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~vG~~~~~~~ 289 (508)
T 4f6l_B 228 -----LP-ENMDTIIHAGARTD-------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISVGTYFDIDT 289 (508)
T ss_dssp -----CS-SCCSEEEECCCC---------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCTTSEECTTC
T ss_pred -----Cc-cCCCEEEECCceec-------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhhccCCccCC
Confidence 22 57999999999753 1234677888999999999998844 3579999999876 10
Q ss_pred ------------CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 143 ------------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 143 ------------~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
+..+...|+.+|.+.+.+++.++. .|++++.+.||.|..+...
T Consensus 290 ~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~ 344 (508)
T 4f6l_B 290 EDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNG 344 (508)
T ss_dssp SCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSS
T ss_pred cCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCC
Confidence 012457899999999999987643 5899999999999876543
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.76 E-value=9.4e-18 Score=132.75 Aligned_cols=153 Identities=14% Similarity=0.069 Sum_probs=111.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+|+||++++++|+++| ++|++++|++++... +.+... .+.++.+|++|.+++.++++ .+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~--~~~~~~~D~~d~~~l~~~~~--------~~ 73 (299)
T 2wm3_A 6 KLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQ--GAEVVQGDQDDQVIMELALN--------GA 73 (299)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHT--TCEEEECCTTCHHHHHHHHT--------TC
T ss_pred CEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHC--CCEEEEecCCCHHHHHHHHh--------cC
Confidence 579999999999999999999999 999999998765422 223222 46788999999988877664 48
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC---CCChhhhhhHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---PSVSLYGAYKGA 156 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---~~~~~y~asK~a 156 (202)
|.|||+++..... . .+.|+.+...++++ +++.+.++||++|+.. ..+. +....|..+|.+
T Consensus 74 d~vi~~a~~~~~~-----~-------~~~~~~~~~~~~~a----a~~~gv~~iv~~S~~~-~~~~~~~~~~~~y~~sK~~ 136 (299)
T 2wm3_A 74 YATFIVTNYWESC-----S-------QEQEVKQGKLLADL----ARRLGLHYVVYSGLEN-IKKLTAGRLAAAHFDGKGE 136 (299)
T ss_dssp SEEEECCCHHHHT-----C-------HHHHHHHHHHHHHH----HHHHTCSEEEECCCCC-HHHHTTTSCCCHHHHHHHH
T ss_pred CEEEEeCCCCccc-----c-------chHHHHHHHHHHHH----HHHcCCCEEEEEcCcc-ccccCCCcccCchhhHHHH
Confidence 9999999853110 1 22445555444444 4555678999966543 3221 224679999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
++.+.+. .|++++.+.||++.+++..
T Consensus 137 ~e~~~~~-------~gi~~~ilrp~~~~~~~~~ 162 (299)
T 2wm3_A 137 VEEYFRD-------IGVPMTSVRLPCYFENLLS 162 (299)
T ss_dssp HHHHHHH-------HTCCEEEEECCEEGGGGGT
T ss_pred HHHHHHH-------CCCCEEEEeecHHhhhchh
Confidence 9988864 3799999999999887643
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.76 E-value=5e-19 Score=139.24 Aligned_cols=149 Identities=13% Similarity=0.073 Sum_probs=115.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||| +|+||++++++|+++|++|++++|+++++ ..++.++.+|++|.+++.++++ +++|
T Consensus 4 ~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~-------~~~d 65 (286)
T 3gpi_A 4 SKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH-------LRPE 65 (286)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG-------GCCS
T ss_pred CcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc-------CCCC
Confidence 5799999 59999999999999999999999987652 2458889999999888776654 3699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 149 (202)
+|||+|+.. .++.+..+++|+.++..+++++ ++.+.+++|++||...+.. ..+...
T Consensus 66 ~vih~a~~~---------~~~~~~~~~~n~~~~~~ll~a~----~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~ 132 (286)
T 3gpi_A 66 ILVYCVAAS---------EYSDEHYRLSYVEGLRNTLSAL----EGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDF 132 (286)
T ss_dssp EEEECHHHH---------HHC-----CCSHHHHHHHHHHT----TTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSH
T ss_pred EEEEeCCCC---------CCCHHHHHHHHHHHHHHHHHHH----hhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCCh
Confidence 999999853 2345677789999999998887 4455689999999764322 224678
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
|+.+|.+.+.+ +.. ++++.+.||++..+...
T Consensus 133 Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~ 163 (286)
T 3gpi_A 133 SGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRL 163 (286)
T ss_dssp HHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBC
T ss_pred hhHHHHHHHHH-Hhc--------CCeEEEecccccCCCch
Confidence 99999999888 532 88999999999877654
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=130.86 Aligned_cols=142 Identities=15% Similarity=0.100 Sum_probs=106.7
Q ss_pred EEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 2 TALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
+++||||+|+||++++++|+++ |++|++++|++++..... . ..+.++.+|++|.+++.++++ .+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~--------~~ 66 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSALQ--------GV 66 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHTT--------TC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHHh--------CC
Confidence 4899999999999999999998 999999999876654322 2 246788999999888776654 47
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+|||++|... ..|+.++..+++++ ++.+.+++|++||.... + ....|+.+|.+.+.
T Consensus 67 d~vi~~a~~~~----------------~~~~~~~~~l~~a~----~~~~~~~~v~~Ss~~~~-~--~~~~y~~sK~~~e~ 123 (286)
T 2zcu_A 67 EKLLLISSSEV----------------GQRAPQHRNVINAA----KAAGVKFIAYTSLLHAD-T--SPLGLADEHIETEK 123 (286)
T ss_dssp SEEEECC------------------------CHHHHHHHHH----HHHTCCEEEEEEETTTT-T--CCSTTHHHHHHHHH
T ss_pred CEEEEeCCCCc----------------hHHHHHHHHHHHHH----HHcCCCEEEEECCCCCC-C--CcchhHHHHHHHHH
Confidence 99999999521 03566666666655 44456799999998765 2 23579999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+.+. .|++++.+.||++.+++
T Consensus 124 ~~~~-------~~~~~~ilrp~~~~~~~ 144 (286)
T 2zcu_A 124 MLAD-------SGIVYTLLRNGWYSENY 144 (286)
T ss_dssp HHHH-------HCSEEEEEEECCBHHHH
T ss_pred HHHH-------cCCCeEEEeChHHhhhh
Confidence 8863 48999999999987654
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.74 E-value=8.6e-19 Score=139.58 Aligned_cols=159 Identities=17% Similarity=0.074 Sum_probs=112.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+|+||++++++|+++|++|++++|+..........+.. ...++.++.+|++ +
T Consensus 8 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~------------------~ 69 (321)
T 3vps_A 8 HRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS------------------D 69 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT------------------T
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc------------------c
Confidence 5799999999999999999999999999999976521000000000 0122344444443 6
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC-----------CCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI-----------PSV 147 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~-----------~~~ 147 (202)
+|+|||+|+........ ++....++ |+.++..+++++ ++.+.+++|++||...+... .+.
T Consensus 70 ~d~vi~~a~~~~~~~~~----~~~~~~~~-n~~~~~~ll~a~----~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~ 140 (321)
T 3vps_A 70 VRLVYHLASHKSVPRSF----KQPLDYLD-NVDSGRHLLALC----TSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPR 140 (321)
T ss_dssp EEEEEECCCCCCHHHHT----TSTTTTHH-HHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred CCEEEECCccCChHHHH----hCHHHHHH-HHHHHHHHHHHH----HHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCC
Confidence 89999999975421111 11223455 999999998887 33446799999997654321 235
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCc-EEEEeeCCcccCCCcc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNI-RTNTVAPWVIKTSMIK 189 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi-~v~~v~pG~v~t~~~~ 189 (202)
..|+.+|.+.+.+++.++.+ .|+ +++.+.|+++..+...
T Consensus 141 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~ 180 (321)
T 3vps_A 141 SPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGER 180 (321)
T ss_dssp SHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCC
T ss_pred ChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCC
Confidence 78999999999999988876 478 9999999999887543
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=5.1e-17 Score=131.75 Aligned_cols=149 Identities=16% Similarity=0.043 Sum_probs=110.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEec-CCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCD-LSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~D-v~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++||||+|+||++++++|+++|++|++++|++++.. .+.+.. ...+.++.+| ++|.+++.++++ .+
T Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~--------~~ 74 (352)
T 1xgk_A 6 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE--------GA 74 (352)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT--------TC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh--------cC
Confidence 57999999999999999999999999999999876542 122322 2357888999 999988877654 47
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCC-CccCCCCChhhhhhHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVG-GVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~-~~~~~~~~~~y~asK~a~ 157 (202)
|.|||+++.... +.|..+ ..++++ +++.+ .+++|++||.. +..+.++...|+.+|.+.
T Consensus 75 d~Vi~~a~~~~~---------------~~~~~~-~~l~~a----a~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~ 134 (352)
T 1xgk_A 75 HLAFINTTSQAG---------------DEIAIG-KDLADA----AKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV 134 (352)
T ss_dssp SEEEECCCSTTS---------------CHHHHH-HHHHHH----HHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred CEEEEcCCCCCc---------------HHHHHH-HHHHHH----HHHcCCccEEEEeCCccccccCCCCCccHHHHHHHH
Confidence 999999875310 124443 444444 45555 67999999986 344444557899999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
+.+++. .|++++.+.||++-++.
T Consensus 135 E~~~~~-------~gi~~~ivrpg~~g~~~ 157 (352)
T 1xgk_A 135 ENYVRQ-------LGLPSTFVYAGIYNNNF 157 (352)
T ss_dssp HHHHHT-------SSSCEEEEEECEEGGGC
T ss_pred HHHHHH-------cCCCEEEEecceecCCc
Confidence 999875 27999999999875543
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.71 E-value=3.6e-16 Score=123.85 Aligned_cols=145 Identities=16% Similarity=0.183 Sum_probs=105.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-------hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-------IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-------~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|+++||||+|+||++++++|+++|++|++++|++ ++.+.. +++... .+.++.+|++|.+++.++++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~--~v~~v~~D~~d~~~l~~~~~---- 75 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSL--GVILLEGDINDHETLVKAIK---- 75 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHT--TCEEEECCTTCHHHHHHHHT----
T ss_pred cEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhC--CCEEEEeCCCCHHHHHHHHh----
Confidence 5799999999999999999999999999999986 444332 333332 47788999999988777665
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCcc------CCCC
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR------GIPS 146 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~------~~~~ 146 (202)
.+|+|||++|... +.+...+++++ ++.+ .+++|+ |..+.. ..|.
T Consensus 76 ----~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~--S~~g~~~~~~~~~~p~ 126 (307)
T 2gas_A 76 ----QVDIVICAAGRLL-------------------IEDQVKIIKAI----KEAGNVKKFFP--SEFGLDVDRHDAVEPV 126 (307)
T ss_dssp ----TCSEEEECSSSSC-------------------GGGHHHHHHHH----HHHCCCSEEEC--SCCSSCTTSCCCCTTH
T ss_pred ----CCCEEEECCcccc-------------------cccHHHHHHHH----HhcCCceEEee--cccccCcccccCCCcc
Confidence 4899999999632 23444444444 4444 567773 444421 1233
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCcc
Q 028868 147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~ 189 (202)
...| .+|.+++.+++. .|++++.+.||++.+++..
T Consensus 127 ~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~ 161 (307)
T 2gas_A 127 RQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLR 161 (307)
T ss_dssp HHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGG
T ss_pred hhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccc
Confidence 5678 999999887762 3799999999999887654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=6.8e-16 Score=124.53 Aligned_cols=148 Identities=14% Similarity=0.061 Sum_probs=112.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh----hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ----IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~----~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++||||+|+||++++++|+++|++|++++|++ ++.. ..+.+.. ..+.++.+|++|.+++.+++++
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~------ 81 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKE------ 81 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHH------
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhh------
Confidence 4799999999999999999999999999999976 3332 2233332 3578899999999999888875
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCc----cCCCCChhhh
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGV----RGIPSVSLYG 151 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~----~~~~~~~~y~ 151 (202)
..+|+|||+++. .|+.+...+++++ ++.+ ..++|+ |+.... .+.++...|+
T Consensus 82 ~~~d~Vi~~a~~-------------------~n~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~ 137 (346)
T 3i6i_A 82 HEIDIVVSTVGG-------------------ESILDQIALVKAM----KAVGTIKRFLP-SEFGHDVNRADPVEPGLNMY 137 (346)
T ss_dssp TTCCEEEECCCG-------------------GGGGGHHHHHHHH----HHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHH
T ss_pred CCCCEEEECCch-------------------hhHHHHHHHHHHH----HHcCCceEEee-cccCCCCCccCcCCCcchHH
Confidence 368999999996 2788888888776 4444 567765 443221 1224567899
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+|..++.+.+. .|+.+..+.||++...+.
T Consensus 138 ~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~ 167 (346)
T 3i6i_A 138 REKRRVRQLVEE-------SGIPFTYICCNSIASWPY 167 (346)
T ss_dssp HHHHHHHHHHHH-------TTCCBEEEECCEESSCCC
T ss_pred HHHHHHHHHHHH-------cCCCEEEEEecccccccC
Confidence 999998888764 589999999999877553
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-16 Score=124.65 Aligned_cols=147 Identities=17% Similarity=0.103 Sum_probs=104.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|.+. |++|++++|++++.... ....+.++.+|++|.+++.++++ .+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~--------~~ 66 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK--------GM 66 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT--------TC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh--------CC
Confidence 57999999999999999999998 99999999998764332 12358889999999988776654 58
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|.|||++|.... . ..|+.++..+++++ ++.+.++||++||.......+ |..++...
T Consensus 67 d~vi~~a~~~~~-------~-------~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~~~~~----~~~~~~~~-- 122 (289)
T 3e48_A 67 DTVVFIPSIIHP-------S-------FKRIPEVENLVYAA----KQSGVAHIIFIGYYADQHNNP----FHMSPYFG-- 122 (289)
T ss_dssp SEEEECCCCCCS-------H-------HHHHHHHHHHHHHH----HHTTCCEEEEEEESCCSTTCC----STTHHHHH--
T ss_pred CEEEEeCCCCcc-------c-------hhhHHHHHHHHHHH----HHcCCCEEEEEcccCCCCCCC----CccchhHH--
Confidence 999999996421 1 12555555555544 666678999999965443322 33333211
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.....+...|++++.+.||++.+++.
T Consensus 123 ---~~e~~~~~~g~~~~ilrp~~~~~~~~ 148 (289)
T 3e48_A 123 ---YASRLLSTSGIDYTYVRMAMYMDPLK 148 (289)
T ss_dssp ---HHHHHHHHHCCEEEEEEECEESTTHH
T ss_pred ---HHHHHHHHcCCCEEEEeccccccccH
Confidence 22223335689999999999998764
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.69 E-value=5e-16 Score=121.93 Aligned_cols=141 Identities=13% Similarity=-0.009 Sum_probs=105.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|||| |+||.+++++|+++|++|++++|++++...... .++.++.+|++|.+ + ..+|
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~-~~~d 65 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------L-DGVT 65 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------C-TTCC
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------c-CCCC
Confidence 58999998 999999999999999999999999877654432 25888999999822 3 5789
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc--CCCCeEEEecCCCCccC-----------CCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA--SGNGSIVFISSVGGVRG-----------IPSV 147 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~vsS~~~~~~-----------~~~~ 147 (202)
+|||+|+..... .. . .+.++..+++ .+..++|++||...+.. ..+.
T Consensus 66 ~vi~~a~~~~~~-----~~--~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~ 124 (286)
T 3ius_A 66 HLLISTAPDSGG-----DP--V--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPT 124 (286)
T ss_dssp EEEECCCCBTTB-----CH--H--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCC
T ss_pred EEEECCCccccc-----cH--H--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCC
Confidence 999999965321 10 0 1233333344 34679999999754322 1234
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
..|+.+|.+.+.+.+.+ .|++++.+.||++..+..
T Consensus 125 ~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~ 159 (286)
T 3ius_A 125 AARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGR 159 (286)
T ss_dssp SHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTB
T ss_pred CHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCc
Confidence 57999999999998876 589999999999987754
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.69 E-value=1.1e-16 Score=130.36 Aligned_cols=136 Identities=17% Similarity=0.160 Sum_probs=110.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||+|+||++++++|+++|+ +|+..+|+ +|.+++.++++ .+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~--------~~ 47 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL--------KA 47 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH--------HC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc--------cC
Confidence 6899999999999999999999998 88877765 66777777665 37
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCC-eEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|+|||+||..... +++..+++|+.++..+++++ ++.+.. ++|++||..... ...|+.+|.+.+
T Consensus 48 d~Vih~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E 111 (369)
T 3st7_A 48 DFIVHLAGVNRPE--------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKLQGE 111 (369)
T ss_dssp SEEEECCCSBCTT--------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHH
T ss_pred CEEEECCcCCCCC--------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHHHHH
Confidence 9999999975432 23345668999999998887 444444 899999987654 578999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+++.++.+. |+++..+.|+++..+..
T Consensus 112 ~~~~~~~~~~---g~~~~i~R~~~v~G~~~ 138 (369)
T 3st7_A 112 QLLREYAEEY---GNTVYIYRWPNLFGKWC 138 (369)
T ss_dssp HHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred HHHHHHHHHh---CCCEEEEECCceeCCCC
Confidence 9999998875 69999999999987754
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.67 E-value=1.5e-15 Score=120.59 Aligned_cols=147 Identities=16% Similarity=0.171 Sum_probs=106.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-----hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-----IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-----~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|+++||||+|+||++++++|+++|++|++++|+. ++.+. .+.+. ...+.++.+|++|.+++.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~d~~~l~~~~~------ 75 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK--QLGAKLIEASLDDHQRLVDALK------ 75 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH--TTTCEEECCCSSCHHHHHHHHT------
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH--hCCeEEEeCCCCCHHHHHHHHh------
Confidence 5799999999999999999999999999999984 33322 22332 2347888999999988777664
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCcc-C------CCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR-G------IPSV 147 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~-~------~~~~ 147 (202)
.+|.|||+++..... .|+.+...+++++ ++.+ .+++|+ | ..+.. . .|..
T Consensus 76 --~~d~vi~~a~~~~~~---------------~~~~~~~~l~~aa----~~~g~v~~~v~-S-~~g~~~~~~~~~~~p~~ 132 (313)
T 1qyd_A 76 --QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLP-S-EFGMDPDIMEHALQPGS 132 (313)
T ss_dssp --TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEEC-S-CCSSCTTSCCCCCSSTT
T ss_pred --CCCEEEECCccccch---------------hhHHHHHHHHHHH----HhcCCCceEEe-c-CCcCCccccccCCCCCc
Confidence 489999999965321 2566666666665 5555 678875 4 33321 1 2345
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
..| .+|.+++.+.+ ..|++++.+.||++.+++
T Consensus 133 ~~y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~ 164 (313)
T 1qyd_A 133 ITF-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYF 164 (313)
T ss_dssp HHH-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHH
T ss_pred chH-HHHHHHHHHHH-------hcCCCeEEEEeceecccc
Confidence 678 99999988775 247889999999886543
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=3.8e-16 Score=126.47 Aligned_cols=158 Identities=13% Similarity=0.071 Sum_probs=113.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-----CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-----AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-----~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||+|+||++++++|+++| ++|++++|++.... ....++.++.+|++|.+++.++++..
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 70 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL---- 70 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC----
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC----
Confidence 589999999999999999999999 99999999865432 12346788999999998877766531
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEE-------EecCCCCccC-----
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIV-------FISSVGGVRG----- 143 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv-------~vsS~~~~~~----- 143 (202)
.++|+|||+||... ++.+..+++|+.++..+++++.+... +..++| ++||...+..
T Consensus 71 -~~~d~vih~a~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~~--~~~~~v~~~g~~i~~Ss~~vyg~~~~~~ 138 (364)
T 2v6g_A 71 -TDVTHVFYVTWANR---------STEQENCEANSKMFRNVLDAVIPNCP--NLKHISLQTGRKHYMGPFESYGKIESHD 138 (364)
T ss_dssp -TTCCEEEECCCCCC---------SSHHHHHHHHHHHHHHHHHHHTTTCT--TCCEEEEECCTHHHHCCGGGTTTSCCCC
T ss_pred -CCCCEEEECCCCCc---------chHHHHHHHhHHHHHHHHHHHHHhcc--ccceEEeccCceEEEechhhccccccCC
Confidence 24999999999642 23567889999999999999854321 345676 6887643211
Q ss_pred ---------CCCChhhhhhHHHHHHHHHHHHHHHccCC-cEEEEeeCCcccCCCc
Q 028868 144 ---------IPSVSLYGAYKGAMNQLTKNLACEWAKDN-IRTNTVAPWVIKTSMI 188 (202)
Q Consensus 144 ---------~~~~~~y~asK~a~~~~~~~la~e~~~~g-i~v~~v~pG~v~t~~~ 188 (202)
.|....| .+.+.+.+.++. ..| +++..+.|+++..+..
T Consensus 139 ~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~ 186 (364)
T 2v6g_A 139 PPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSP 186 (364)
T ss_dssp SSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCT
T ss_pred CCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCC
Confidence 1123345 234444444432 245 9999999999987644
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.66 E-value=7.2e-16 Score=130.89 Aligned_cols=153 Identities=13% Similarity=0.120 Sum_probs=112.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|+||.+++++|+++|++|++++|+..+.. .+..|+.+. ..+.+ ..+|
T Consensus 148 m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~---------~~~~l-~~~D 203 (516)
T 3oh8_A 148 LTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNP---------ASDLL-DGAD 203 (516)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSC---------CTTTT-TTCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccch---------hHHhc-CCCC
Confidence 58999999999999999999999999999999875421 145677642 12223 4799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CCCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~~ 149 (202)
+|||+||..... ..+.+..+..+++|+.++..+++++. ++.+.+++|++||...+. ..++...
T Consensus 204 ~Vih~A~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~ 277 (516)
T 3oh8_A 204 VLVHLAGEPIFG---RFNDSHKEAIRESRVLPTKFLAELVA---ESTQCTTMISASAVGFYGHDRGDEILTEESESGDDF 277 (516)
T ss_dssp EEEECCCC--------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSH
T ss_pred EEEECCCCcccc---ccchhHHHHHHHHHHHHHHHHHHHHH---hcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcCh
Confidence 999999975332 34556788899999999999999742 334567999999976433 1124556
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
|+.+|...+.+.+ .....|++++.+.||++.++.
T Consensus 278 y~~~~~~~E~~~~----~~~~~gi~~~ilRp~~v~Gp~ 311 (516)
T 3oh8_A 278 LAEVCRDWEHATA----PASDAGKRVAFIRTGVALSGR 311 (516)
T ss_dssp HHHHHHHHHHTTH----HHHHTTCEEEEEEECEEEBTT
T ss_pred HHHHHHHHHHHHH----HHHhCCCCEEEEEeeEEECCC
Confidence 8888887776543 234568999999999998875
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.65 E-value=8.4e-16 Score=122.60 Aligned_cols=144 Identities=17% Similarity=0.183 Sum_probs=101.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-h----HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-I----ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~----~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|+++||||+|+||++++++|+++|++|++++|+. . ......+.+.. ..+.++.+|++|.+++.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~--~~v~~v~~D~~d~~~l~~a~~------ 76 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS--MGVTIIEGEMEEHEKMVSVLK------ 76 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH--TTCEEEECCTTCHHHHHHHHT------
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc--CCcEEEEecCCCHHHHHHHHc------
Confidence 5799999999999999999999999999999986 1 22222333333 247888999999988877765
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCcc------CCCCCh
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR------GIPSVS 148 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~------~~~~~~ 148 (202)
.+|+|||+++... +.+...+++++ ++.+ .+++| .|..+.. ..|...
T Consensus 77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v--~S~~g~~~~~~~~~~p~~~ 129 (321)
T 3c1o_A 77 --QVDIVISALPFPM-------------------ISSQIHIINAI----KAAGNIKRFL--PSDFGCEEDRIKPLPPFES 129 (321)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCCEEE--CSCCSSCGGGCCCCHHHHH
T ss_pred --CCCEEEECCCccc-------------------hhhHHHHHHHH----HHhCCccEEe--ccccccCccccccCCCcch
Confidence 3899999999532 33334444443 5544 56777 3444421 112245
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.| .+|.+++.+++. .|++++.+.||++.+++
T Consensus 130 ~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~ 160 (321)
T 3c1o_A 130 VL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYF 160 (321)
T ss_dssp HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHH
T ss_pred HH-HHHHHHHHHHHH-------cCCCeEEEEeceecccc
Confidence 79 999999988862 36888889999886543
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.2e-15 Score=121.68 Aligned_cols=143 Identities=20% Similarity=0.229 Sum_probs=100.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+|+||++++++|+++|++|++++|+++......+++... .+.++.+|++|.+++.++++ .+|
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~a~~--------~~d 81 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL--GAIIVKGELDEHEKLVELMK--------KVD 81 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT--TCEEEECCTTCHHHHHHHHT--------TCS
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC--CCEEEEecCCCHHHHHHHHc--------CCC
Confidence 47999999999999999999999999999999875222223333332 47788999999988877765 489
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccC------CCCChhhhhh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRG------IPSVSLYGAY 153 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~------~~~~~~y~as 153 (202)
+|||+++... +.+...+++++ ++.+ .+++|+ |+ .+... .|....| .+
T Consensus 82 ~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~s 135 (318)
T 2r6j_A 82 VVISALAFPQ-------------------ILDQFKILEAI----KVAGNIKRFLP-SD-FGVEEDRINALPPFEALI-ER 135 (318)
T ss_dssp EEEECCCGGG-------------------STTHHHHHHHH----HHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-HH
T ss_pred EEEECCchhh-------------------hHHHHHHHHHH----HhcCCCCEEEe-ec-cccCcccccCCCCcchhH-HH
Confidence 9999998531 23333444443 5444 567774 43 33211 1223568 99
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
|.+++.+.+. .|+.+..+.||++..+
T Consensus 136 K~~~e~~~~~-------~~~~~~~lr~~~~~~~ 161 (318)
T 2r6j_A 136 KRMIRRAIEE-------ANIPYTYVSANCFASY 161 (318)
T ss_dssp HHHHHHHHHH-------TTCCBEEEECCEEHHH
T ss_pred HHHHHHHHHh-------cCCCeEEEEcceehhh
Confidence 9998888763 4788889999987654
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=4.5e-15 Score=117.54 Aligned_cols=143 Identities=15% Similarity=0.147 Sum_probs=100.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-----HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-----LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-----~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|+++||||+|+||++++++|+++|++|++++|+... .....+.+.. ..+.++.+|++|.+++.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~l~~~~~------ 76 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK------ 76 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH------
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh--CCCEEEEeccCCHHHHHHHHc------
Confidence 579999999999999999999999999999997422 1122223322 347888999999988887765
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCcc-----C-CCCCh
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR-----G-IPSVS 148 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~-----~-~~~~~ 148 (202)
.+|+|||+++... +.+...+++++ ++.+ .+++|+ |+ .+.. + .|...
T Consensus 77 --~~d~vi~~a~~~~-------------------~~~~~~l~~aa----~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~ 129 (308)
T 1qyc_A 77 --NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFP-SE-FGNDVDNVHAVEPAKS 129 (308)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEEC-SC-CSSCTTSCCCCTTHHH
T ss_pred --CCCEEEECCcchh-------------------hhhHHHHHHHH----HhcCCCceEee-cc-cccCccccccCCcchh
Confidence 3799999998531 23334444443 4444 577873 44 3321 1 22245
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
.| .+|.+++.+.+. .|+++..+.||++.++
T Consensus 130 ~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~ 159 (308)
T 1qyc_A 130 VF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGY 159 (308)
T ss_dssp HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHH
T ss_pred HH-HHHHHHHHHHHh-------cCCCeEEEEeceeccc
Confidence 78 999999888763 3688889999988654
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=8.9e-13 Score=104.04 Aligned_cols=153 Identities=18% Similarity=0.136 Sum_probs=103.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+||||||||.||++++++|.++|++|+++.|++.. .++ ..| .+. .+.+ ..+|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~---~~~-----~~~------~~~l-~~~d 53 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRI---TWD-----ELA------ASGL-PSCD 53 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEE---EHH-----HHH------HHCC-CSCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Cee---ecc-----hhh------Hhhc-cCCC
Confidence 689999999999999999999999999999997532 111 111 110 1223 5799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 149 (202)
.+||.||.....+....+.+..+.+++.|+.++..+.+++.. ...+...+|+.||...+.+ ..+...
T Consensus 54 ~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~--~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~ 131 (298)
T 4b4o_A 54 AAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITK--APQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDF 131 (298)
T ss_dssp EEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHH--CSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSH
T ss_pred EEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHH--hCCCceEEEEEeeeeeecCCCCCcccccCCccccch
Confidence 999999865444445567888889999999999888776622 1223445777777654322 112334
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
|+..+...+.. ......++++..+.||.|..+-
T Consensus 132 ~~~~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~ 164 (298)
T 4b4o_A 132 FSNLVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRG 164 (298)
T ss_dssp HHHHHHHHHHH-----HCCSSSSSEEEEEEECEEECTT
T ss_pred hHHHHHHHHHH-----HHhhccCCceeeeeeeeEEcCC
Confidence 55444433321 2234568999999999998764
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=9.9e-13 Score=105.50 Aligned_cols=164 Identities=11% Similarity=0.076 Sum_probs=109.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQ--IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
++++||||+|+||.+++..|+++|+ +|+++++.+ ++.......+.+.... ++ .|+.+.+++.+.+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~--~~-~di~~~~~~~~a~--- 78 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFP--LL-AGLEATDDPKVAF--- 78 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCT--TE-EEEEEESCHHHHT---
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccc--cc-CCeEeccChHHHh---
Confidence 3699999999999999999999986 899999875 3333333344332111 12 4555433333222
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc--------c-
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV--------R- 142 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~--------~- 142 (202)
...|+|||.||..... ..+ ..+.++.|+.++..+++++..+= ....+++++|+.... .
T Consensus 79 -----~~~D~Vih~Ag~~~~~---~~~---~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~ 145 (327)
T 1y7t_A 79 -----KDADYALLVGAAPRKA---GME---RRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP 145 (327)
T ss_dssp -----TTCSEEEECCCCCCCT---TCC---HHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred -----CCCCEEEECCCcCCCC---CCC---HHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence 3589999999975421 123 35678999999999999884421 123578888876521 1
Q ss_pred CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 143 ~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
+.++...|+.+|...+.+.+.++..+ |+.+..+.|.+|..|
T Consensus 146 ~~~p~~~yg~tkl~~er~~~~~a~~~---g~~~~~vr~~~V~G~ 186 (327)
T 1y7t_A 146 GLNPRNFTAMTRLDHNRAKAQLAKKT---GTGVDRIRRMTVWGN 186 (327)
T ss_dssp TSCGGGEEECCHHHHHHHHHHHHHHH---TCCGGGEECCEEEBC
T ss_pred CCChhheeccchHHHHHHHHHHHHHh---CcChhheeeeEEEcC
Confidence 24455679999999999988888765 466666666665443
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=6.1e-14 Score=110.58 Aligned_cols=105 Identities=21% Similarity=0.289 Sum_probs=77.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||+||+|+++++.|+++|++|++++|+.++.+...+++... ..+.++.+|++++++++++++ .+|
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~--------~~D 190 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK--------GAH 190 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT--------TCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH--------hCC
Confidence 68999999999999999999999999999999998888877776542 235677899999887765544 479
Q ss_pred EEEEcCCCCCC-CCCCCCCH-HHHHHHHHHHhHhHH
Q 028868 81 ILINNAAIAFV-KPTVDITA-EDMSTVSSTNFESVF 114 (202)
Q Consensus 81 ~vi~~ag~~~~-~~~~~~~~-~~~~~~~~~n~~~~~ 114 (202)
+||||+|.... .+..+.+. +.++..+++|+.+++
T Consensus 191 vlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~ 226 (287)
T 1lu9_A 191 FVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL 226 (287)
T ss_dssp EEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred EEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence 99999986421 12111221 334445666666655
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=5.6e-10 Score=84.43 Aligned_cols=79 Identities=25% Similarity=0.256 Sum_probs=59.3
Q ss_pred CEEEEecC----------------CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 028868 1 MTALVTGG----------------TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 1 k~~lItGa----------------s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i 64 (202)
|++||||| ||+||.++|++|+++|++|++++++.. +. ....+ -.+|+++.+
T Consensus 9 k~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~--------~~~g~--~~~dv~~~~-- 75 (226)
T 1u7z_A 9 LNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP--------TPPFV--KRVDVMTAL-- 75 (226)
T ss_dssp CEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC--------CCTTE--EEEECCSHH--
T ss_pred CEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc--------cCCCC--eEEccCcHH--
Confidence 68999999 689999999999999999999887642 11 01112 246777754
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCCCCCCCC
Q 028868 65 EKLIETVTSIFQGKLNILINNAAIAFVKPT 94 (202)
Q Consensus 65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~ 94 (202)
++++.+.+.+ +++|++|||||+....+.
T Consensus 76 -~~~~~v~~~~-~~~Dili~~Aav~d~~p~ 103 (226)
T 1u7z_A 76 -EMEAAVNASV-QQQNIFIGCAAVADYRAA 103 (226)
T ss_dssp -HHHHHHHHHG-GGCSEEEECCBCCSEEES
T ss_pred -HHHHHHHHhc-CCCCEEEECCcccCCCCc
Confidence 4566667777 789999999998755544
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.1e-09 Score=72.67 Aligned_cols=72 Identities=18% Similarity=0.187 Sum_probs=59.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|+|+ |++|.++++.|.++| ++|++++|++++.+... . ..+..+.+|+++.+++.+++ ..+
T Consensus 6 ~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~--------~~~ 70 (118)
T 3ic5_A 6 WNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--MGVATKQVDAKDEAGLAKAL--------GGF 70 (118)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--TTCEEEECCTTCHHHHHHHT--------TTC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--CCCcEEEecCCCHHHHHHHH--------cCC
Confidence 47899999 999999999999999 89999999987776554 2 23567889999987766554 258
Q ss_pred cEEEEcCC
Q 028868 80 NILINNAA 87 (202)
Q Consensus 80 d~vi~~ag 87 (202)
|++|++++
T Consensus 71 d~vi~~~~ 78 (118)
T 3ic5_A 71 DAVISAAP 78 (118)
T ss_dssp SEEEECSC
T ss_pred CEEEECCC
Confidence 99999996
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.99 E-value=7.3e-10 Score=84.01 Aligned_cols=90 Identities=19% Similarity=0.225 Sum_probs=64.5
Q ss_pred CEEEEecC----------------CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 028868 1 MTALVTGG----------------TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 1 k~~lItGa----------------s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i 64 (202)
|++||||| ||++|.++|++++++|++|++++|..... . .....+.. .|+. +.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~------~~~~~~~~--~~v~---s~ 71 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P------EPHPNLSI--REIT---NT 71 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C------CCCTTEEE--EECC---SH
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c------cCCCCeEE--EEHh---HH
Confidence 78999999 78899999999999999999999875311 0 00112322 3444 56
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHH
Q 028868 65 EKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS 103 (202)
Q Consensus 65 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~ 103 (202)
++.++.+.+.+ +++|++|++|++...++....+.+.+.
T Consensus 72 ~em~~~v~~~~-~~~Dili~aAAvsD~~p~~~~~~e~~~ 109 (232)
T 2gk4_A 72 KDLLIEMQERV-QDYQVLIHSMAVSDYTPVYMTGLEEVQ 109 (232)
T ss_dssp HHHHHHHHHHG-GGCSEEEECSBCCSEEEEEEEEHHHHH
T ss_pred HHHHHHHHHhc-CCCCEEEEcCccccccchhhcchhhhh
Confidence 66777777777 789999999998876665444444433
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.95 E-value=6.1e-09 Score=85.77 Aligned_cols=81 Identities=23% Similarity=0.207 Sum_probs=70.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC---CEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG---AIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g---~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++|+|| |+||+++++.|+++| .+|++.+|+.++++...+++... +.++..+.+|++|.++++++++..
T Consensus 2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----- 75 (405)
T 4ina_A 2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----- 75 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence 57999999 899999999999998 48999999999999888887653 245888999999999999888763
Q ss_pred CCccEEEEcCCC
Q 028868 77 GKLNILINNAAI 88 (202)
Q Consensus 77 ~~id~vi~~ag~ 88 (202)
++|+|||+++.
T Consensus 76 -~~DvVin~ag~ 86 (405)
T 4ina_A 76 -KPQIVLNIALP 86 (405)
T ss_dssp -CCSEEEECSCG
T ss_pred -CCCEEEECCCc
Confidence 58999999984
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1.2e-09 Score=78.47 Aligned_cols=78 Identities=15% Similarity=0.049 Sum_probs=64.9
Q ss_pred CchHHHHHHHHHHCCCEEEEEeCChhHHH---HHHHHHHhcCCeEEEEEecCCCH--HHHHHHHHHHHHHhCCCccEEEE
Q 028868 10 RGIGHATVEELARFGAIVHTCSRNQIELD---ARLHEWKNKGFKVTGSVCDLSSR--EQREKLIETVTSIFQGKLNILIN 84 (202)
Q Consensus 10 ~giG~a~a~~l~~~g~~Vi~~~r~~~~~~---~~~~~~~~~~~~v~~~~~Dv~~~--~~i~~~~~~~~~~~~~~id~vi~ 84 (202)
+.++.++++.|++.|++|++..|+++... ...+.+.+.|.++..+++|++++ ++++++++.+.+.+ ++ |++||
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~-G~-dVLVn 103 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHK-GK-DVLVH 103 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTT-TS-CEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcC-CC-CEEEE
Confidence 46889999999999999999988654432 23445556688899999999999 99999999999888 67 99999
Q ss_pred cCCCC
Q 028868 85 NAAIA 89 (202)
Q Consensus 85 ~ag~~ 89 (202)
|+|+.
T Consensus 104 nAgg~ 108 (157)
T 3gxh_A 104 CLANY 108 (157)
T ss_dssp CSBSH
T ss_pred CCCCC
Confidence 99963
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.74 E-value=3.8e-08 Score=72.86 Aligned_cols=101 Identities=19% Similarity=0.236 Sum_probs=69.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+||||.++++.+...|++|+++++++++.+.+. +.+.+. .+|.++.+..+.+.+... +..+|
T Consensus 40 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~g~~~---~~d~~~~~~~~~~~~~~~---~~~~D 109 (198)
T 1pqw_A 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RLGVEY---VGDSRSVDFADEILELTD---GYGVD 109 (198)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TTCCSE---EEETTCSTHHHHHHHHTT---TCCEE
T ss_pred CEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCCE---EeeCCcHHHHHHHHHHhC---CCCCe
Confidence 57999999999999999999999999999999987665432 234332 247776554443333221 13699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
++|+++|. + ..+.+++.+++ .|++|.+++..
T Consensus 110 ~vi~~~g~-----------~---------------~~~~~~~~l~~--~G~~v~~g~~~ 140 (198)
T 1pqw_A 110 VVLNSLAG-----------E---------------AIQRGVQILAP--GGRFIELGKKD 140 (198)
T ss_dssp EEEECCCT-----------H---------------HHHHHHHTEEE--EEEEEECSCGG
T ss_pred EEEECCch-----------H---------------HHHHHHHHhcc--CCEEEEEcCCC
Confidence 99999972 0 02344556654 58999998754
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.70 E-value=5.2e-08 Score=78.44 Aligned_cols=102 Identities=17% Similarity=0.176 Sum_probs=72.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++||+||+|+||+++++.+...|++|+++++++++++.+. + .+.+. .+|.++.+++.+.+.++.. +.+|
T Consensus 171 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~---~g~~~---~~d~~~~~~~~~~~~~~~~---~~~D 240 (347)
T 2hcy_A 171 HWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S---IGGEV---FIDFTKEKDIVGAVLKATD---GGAH 240 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-H---TTCCE---EEETTTCSCHHHHHHHHHT---SCEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-H---cCCce---EEecCccHhHHHHHHHHhC---CCCC
Confidence 57999999999999999999999999999999987774432 2 23332 2477755555555544432 3799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
++|+++|.. ..++.+++.+++ .|+++.+++..
T Consensus 241 ~vi~~~g~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~ 272 (347)
T 2hcy_A 241 GVINVSVSE-------------------------AAIEASTRYVRA--NGTTVLVGMPA 272 (347)
T ss_dssp EEEECSSCH-------------------------HHHHHHTTSEEE--EEEEEECCCCT
T ss_pred EEEECCCcH-------------------------HHHHHHHHHHhc--CCEEEEEeCCC
Confidence 999999831 034555666654 58999988754
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=98.69 E-value=1.4e-11 Score=102.69 Aligned_cols=41 Identities=22% Similarity=0.174 Sum_probs=36.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH 42 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~ 42 (202)
|+++|||++ +||+++|+.|...|++|+++++++.+...+..
T Consensus 266 KtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~ 306 (488)
T 3ond_A 266 KVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATM 306 (488)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 689999997 99999999999999999999999877655543
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.67 E-value=7.6e-08 Score=78.26 Aligned_cols=104 Identities=17% Similarity=0.202 Sum_probs=70.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |+||+++++.+...|++|++++|++++++.+.+.+ +.. +.+|.++.+++.+.+. ..|
T Consensus 167 ~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~---~~~~~~~~~~l~~~~~--------~~D 231 (369)
T 2eez_A 167 ASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGR---VITLTATEANIKKSVQ--------HAD 231 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTS---EEEEECCHHHHHHHHH--------HCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cce---EEEecCCHHHHHHHHh--------CCC
Confidence 58999999 99999999999999999999999988776654433 332 3467777777665543 469
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
++|++++..... .+..+.+..++.|++ ++.||++++..+
T Consensus 232 vVi~~~g~~~~~-------------------~~~li~~~~l~~mk~--gg~iV~v~~~~g 270 (369)
T 2eez_A 232 LLIGAVLVPGAK-------------------APKLVTRDMLSLMKE--GAVIVDVAVDQG 270 (369)
T ss_dssp EEEECCC--------------------------CCSCHHHHTTSCT--TCEEEECC----
T ss_pred EEEECCCCCccc-------------------cchhHHHHHHHhhcC--CCEEEEEecCCC
Confidence 999999964210 012234555666653 678999988653
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=5.6e-08 Score=77.77 Aligned_cols=77 Identities=13% Similarity=0.195 Sum_probs=57.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++||||+||||.++++.+...|++|+++++++++++.+ +++ +.+. .+|.++.+++.+.+.++. ++.+|
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~---g~~~---~~d~~~~~~~~~~~~~~~---~~~~d 216 (333)
T 1v3u_A 147 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQI---GFDA---AFNYKTVNSLEEALKKAS---PDGYD 216 (333)
T ss_dssp CEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHT---TCSE---EEETTSCSCHHHHHHHHC---TTCEE
T ss_pred CEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-Hhc---CCcE---EEecCCHHHHHHHHHHHh---CCCCe
Confidence 5799999999999999999999999999999998777665 333 3322 247776344444444332 24799
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
++|+++|
T Consensus 217 ~vi~~~g 223 (333)
T 1v3u_A 217 CYFDNVG 223 (333)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999999
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.64 E-value=6.4e-08 Score=80.69 Aligned_cols=76 Identities=14% Similarity=0.114 Sum_probs=60.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+| +|++|+++++.|++.|++|++++|+.++.+.+.+.+ ..+..+.+|+++.+++.+++. .+|
T Consensus 4 k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~--------~~D 70 (450)
T 1ff9_A 4 KSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA--------KHD 70 (450)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT--------TSS
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc--------CCc
Confidence 5799998 799999999999999999999999987665543322 236778899999887766543 589
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
+|||+++..
T Consensus 71 vVIn~a~~~ 79 (450)
T 1ff9_A 71 LVISLIPYT 79 (450)
T ss_dssp EEEECCC--
T ss_pred EEEECCccc
Confidence 999999853
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=8.2e-09 Score=87.65 Aligned_cols=95 Identities=17% Similarity=0.131 Sum_probs=66.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF-QGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~-~~~i 79 (202)
|+++|||| ||+|+++++.|+++|++|++++|+.++++.+.+++. ..+. ++.+ + +.+ ...+
T Consensus 365 k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~---~~~~----~~~d---l--------~~~~~~~~ 425 (523)
T 2o7s_A 365 KTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG---GKAL----SLTD---L--------DNYHPEDG 425 (523)
T ss_dssp -CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT---C-CE----ETTT---T--------TTC--CCS
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC---Ccee----eHHH---h--------hhccccCc
Confidence 46899999 599999999999999999999999988877766552 2222 2222 1 111 1358
Q ss_pred cEEEEcCCCCCC-----CCCCCCCHHHHHHHHHHHhHhHH
Q 028868 80 NILINNAAIAFV-----KPTVDITAEDMSTVSSTNFESVF 114 (202)
Q Consensus 80 d~vi~~ag~~~~-----~~~~~~~~~~~~~~~~~n~~~~~ 114 (202)
|++|||+|.... .++.+.+.+.+..++++|+.+..
T Consensus 426 DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~ 465 (523)
T 2o7s_A 426 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRI 465 (523)
T ss_dssp EEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSS
T ss_pred eEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCcc
Confidence 999999997532 34555566777888888887653
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.55 E-value=2.4e-08 Score=78.50 Aligned_cols=77 Identities=22% Similarity=0.219 Sum_probs=56.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|||++ |+|+++++.|++.| +|++++|+.++++.+.+++...+.....+.+|+++. .+.+ +.+|
T Consensus 129 k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~-~~~D 195 (287)
T 1nvt_A 129 KNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDL-DGVD 195 (287)
T ss_dssp CEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCC-TTCC
T ss_pred CEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhh-CCCC
Confidence 689999997 99999999999999 999999999888888777654210000112344441 2334 6899
Q ss_pred EEEEcCCCCC
Q 028868 81 ILINNAAIAF 90 (202)
Q Consensus 81 ~vi~~ag~~~ 90 (202)
++||++|...
T Consensus 196 ilVn~ag~~~ 205 (287)
T 1nvt_A 196 IIINATPIGM 205 (287)
T ss_dssp EEEECSCTTC
T ss_pred EEEECCCCCC
Confidence 9999999753
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=98.53 E-value=5.2e-07 Score=72.21 Aligned_cols=149 Identities=12% Similarity=0.113 Sum_probs=96.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCC----hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRN----QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~----~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
+++||||+|++|.+++..|+..|. .|++.+++ +++++.....+.+....+. .|+...++..+.
T Consensus 7 KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~a--- 80 (329)
T 1b8p_A 7 RVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTA--- 80 (329)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHH---
T ss_pred EEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHH---
Confidence 689999999999999999999885 79999998 6666665555654211111 233322222222
Q ss_pred HHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc--------c
Q 028868 71 VTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV--------R 142 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~--------~ 142 (202)
+ ...|+|||.||..... ..+. .+.+..|+..+..+++.+..+- ...+.++++|+..+. .
T Consensus 81 ----l-~~aD~Vi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~~~ 147 (329)
T 1b8p_A 81 ----F-KDADVALLVGARPRGP---GMER---KDLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMKSA 147 (329)
T ss_dssp ----T-TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTC
T ss_pred ----h-CCCCEEEEeCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHHHc
Confidence 2 3579999999975321 1233 3467889998888887774421 135689999886521 1
Q ss_pred -CCCCChhhhhhHHHHHHHHHHHHHHHc
Q 028868 143 -GIPSVSLYGAYKGAMNQLTKNLACEWA 169 (202)
Q Consensus 143 -~~~~~~~y~asK~a~~~~~~~la~e~~ 169 (202)
++|..-.|+.++.--..+...++..+.
T Consensus 148 ~~~p~~~v~g~t~Ld~~r~~~~la~~lg 175 (329)
T 1b8p_A 148 PSLPAKNFTAMLRLDHNRALSQIAAKTG 175 (329)
T ss_dssp TTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence 334444577776555566666776663
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.6e-07 Score=63.87 Aligned_cols=73 Identities=14% Similarity=0.201 Sum_probs=57.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |.+|.++++.|.++|++|+++++++++.+...+ . .+.++..|.++++.++++ .. ...|
T Consensus 7 ~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~--~~~~~~gd~~~~~~l~~~------~~-~~~d 72 (141)
T 3llv_A 7 YEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----E--GFDAVIADPTDESFYRSL------DL-EGVS 72 (141)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEECCTTCHHHHHHS------CC-TTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----C--CCcEEECCCCCHHHHHhC------Cc-ccCC
Confidence 35899998 789999999999999999999999877665543 2 256778999998776543 11 4689
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.+|.+.+
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 9998776
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=98.51 E-value=4.3e-07 Score=75.56 Aligned_cols=108 Identities=17% Similarity=0.177 Sum_probs=74.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEe--cCC---------CHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--DLS---------SREQREKLIE 69 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~--Dv~---------~~~~i~~~~~ 69 (202)
++++|+||+|+||.+.++.+...|++|+++++++++++.+. +.+.+..+... |+. +.++++++.+
T Consensus 222 ~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~----~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (447)
T 4a0s_A 222 DIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVR----ALGCDLVINRAELGITDDIADDPRRVVETGRKLAK 297 (447)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCCEEEecccccccccccccccccchhhhHHHH
Confidence 47999999999999999999999999999999887776553 23443322221 221 1244555667
Q ss_pred HHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 70 TVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 70 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
.+.+..+..+|++|+++|.. . .+.+++.++ ..|++|.+++..+
T Consensus 298 ~v~~~~g~g~Dvvid~~G~~-----------~---------------~~~~~~~l~--~~G~iv~~G~~~~ 340 (447)
T 4a0s_A 298 LVVEKAGREPDIVFEHTGRV-----------T---------------FGLSVIVAR--RGGTVVTCGSSSG 340 (447)
T ss_dssp HHHHHHSSCCSEEEECSCHH-----------H---------------HHHHHHHSC--TTCEEEESCCTTC
T ss_pred HHHHHhCCCceEEEECCCch-----------H---------------HHHHHHHHh--cCCEEEEEecCCC
Confidence 77776655799999999930 0 133444554 3689999987654
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=98.50 E-value=5.1e-07 Score=72.17 Aligned_cols=78 Identities=15% Similarity=0.207 Sum_probs=56.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|+||.++++.+...|++|+++++++++++.+.+ + +.+. .+|.++.+..+.+.+... +..+|
T Consensus 147 ~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~---g~~~---~~d~~~~~~~~~i~~~~~---~~~~d 216 (333)
T 1wly_A 147 DYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-L---GCHH---TINYSTQDFAEVVREITG---GKGVD 216 (333)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHHT---TCCEE
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCHHHHHHHHHHhC---CCCCe
Confidence 579999999999999999999999999999999877765533 3 3332 246666544444333221 23699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|+++|.
T Consensus 217 ~vi~~~g~ 224 (333)
T 1wly_A 217 VVYDSIGK 224 (333)
T ss_dssp EEEECSCT
T ss_pred EEEECCcH
Confidence 99999994
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.49 E-value=4.2e-07 Score=72.45 Aligned_cols=102 Identities=15% Similarity=0.145 Sum_probs=70.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|+||.++++.+...|++|+++++++++++.+.+ + +.+. .+|.++.+..+.+.+... +..+|
T Consensus 142 ~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~---g~~~---~~~~~~~~~~~~~~~~~~---~~~~D 211 (327)
T 1qor_A 142 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ---VINYREEDLVERLKEITG---GKKVR 211 (327)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE---EEETTTSCHHHHHHHHTT---TCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-c---CCCE---EEECCCccHHHHHHHHhC---CCCce
Confidence 579999999999999999999999999999999877765543 3 3322 246666544444333221 23699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
++|+++|. . ..+.+++.+++ .|+++.+++..+
T Consensus 212 ~vi~~~g~-~-------------------------~~~~~~~~l~~--~G~iv~~g~~~~ 243 (327)
T 1qor_A 212 VVYDSVGR-D-------------------------TWERSLDCLQR--RGLMVSFGNSSG 243 (327)
T ss_dssp EEEECSCG-G-------------------------GHHHHHHTEEE--EEEEEECCCTTC
T ss_pred EEEECCch-H-------------------------HHHHHHHHhcC--CCEEEEEecCCC
Confidence 99999992 1 02444555554 589999987654
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=98.48 E-value=3.7e-06 Score=67.15 Aligned_cols=118 Identities=14% Similarity=0.131 Sum_probs=74.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
++++||||+|.+|.+++..|+.+| .+|++.+++++ +....++.+... ++.. +.+.++..+++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al-------- 74 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAAL-------- 74 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHH--------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHc--------
Confidence 368999999999999999999998 78999998775 333334443221 2222 22233433332
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
...|+||+++|...... .+. .+.+..|+.++..+++.+.++ ...+.|+++|...+.
T Consensus 75 ~gaDvVi~~ag~~~~~g---~~r---~dl~~~N~~~~~~i~~~i~~~---~p~~~viv~SNPv~~ 130 (326)
T 1smk_A 75 TGMDLIIVPAGVPRKPG---MTR---DDLFKINAGIVKTLCEGIAKC---CPRAIVNLISNPVNS 130 (326)
T ss_dssp TTCSEEEECCCCCCCSS---CCC---SHHHHHHHHHHHHHHHHHHHH---CTTSEEEECCSSHHH
T ss_pred CCCCEEEEcCCcCCCCC---CCH---HHHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCchHH
Confidence 35899999999753221 121 244778998888888777442 223455555555443
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=4.2e-07 Score=73.36 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=55.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|+||+|+||.++++.+...|+ +|+++++++++++.+.+++ +.+. .+|..+.+.. +.+.+..++.+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~----~~~~~~~~~~~ 231 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFDA---AINYKKDNVA----EQLRESCPAGV 231 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCSE---EEETTTSCHH----HHHHHHCTTCE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCce---EEecCchHHH----HHHHHhcCCCC
Confidence 5799999999999999999999999 9999999987776654333 3322 2466653322 22333332369
Q ss_pred cEEEEcCC
Q 028868 80 NILINNAA 87 (202)
Q Consensus 80 d~vi~~ag 87 (202)
|++|+++|
T Consensus 232 d~vi~~~G 239 (357)
T 2zb4_A 232 DVYFDNVG 239 (357)
T ss_dssp EEEEESCC
T ss_pred CEEEECCC
Confidence 99999999
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.46 E-value=5.5e-07 Score=75.33 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=60.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|+|| |++|+++++.|++. |++|.+.+|+.++.+.+.+. ..+..+.+|+.+.+++.+++. .+
T Consensus 24 k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-----~~~~~~~~D~~d~~~l~~~l~--------~~ 89 (467)
T 2axq_A 24 KNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-----SGSKAISLDVTDDSALDKVLA--------DN 89 (467)
T ss_dssp EEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-----GTCEEEECCTTCHHHHHHHHH--------TS
T ss_pred CEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-----cCCcEEEEecCCHHHHHHHHc--------CC
Confidence 46899998 99999999999998 67999999998877665433 135567899999887766553 47
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+|||+++..
T Consensus 90 DvVIn~tp~~ 99 (467)
T 2axq_A 90 DVVISLIPYT 99 (467)
T ss_dssp SEEEECSCGG
T ss_pred CEEEECCchh
Confidence 9999999854
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=7.7e-07 Score=71.82 Aligned_cols=77 Identities=17% Similarity=0.224 Sum_probs=56.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
++++|+||+|+||.++++.+...|++|+++++++++++.+ +++ +.+. .+|..+.+..+.+ .+..+ ..+
T Consensus 164 ~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~---g~~~---~~~~~~~~~~~~~----~~~~~~~~~ 232 (354)
T 2j8z_A 164 DYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKL---GAAA---GFNYKKEDFSEAT----LKFTKGAGV 232 (354)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSE---EEETTTSCHHHHH----HHHTTTSCE
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHc---CCcE---EEecCChHHHHHH----HHHhcCCCc
Confidence 4799999999999999999999999999999998877665 333 3332 2466654433333 33222 369
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|+++|.
T Consensus 233 d~vi~~~G~ 241 (354)
T 2j8z_A 233 NLILDCIGG 241 (354)
T ss_dssp EEEEESSCG
T ss_pred eEEEECCCc
Confidence 999999994
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=4.3e-07 Score=72.69 Aligned_cols=101 Identities=12% Similarity=0.161 Sum_probs=70.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|+||.++++.+...|++|+++++++++++.+.+++ +.+.. .|..+.+..+ .+.+..++.+|
T Consensus 151 ~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~---g~~~~---~~~~~~~~~~----~~~~~~~~~~d 220 (336)
T 4b7c_A 151 ETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL---GFDGA---IDYKNEDLAA----GLKRECPKGID 220 (336)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT---CCSEE---EETTTSCHHH----HHHHHCTTCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCEE---EECCCHHHHH----HHHHhcCCCce
Confidence 57999999999999999999999999999999988776654433 33222 3555543333 33333335799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
++|+++|.. .++.+++.+++ .|+++.++...
T Consensus 221 ~vi~~~g~~--------------------------~~~~~~~~l~~--~G~iv~~G~~~ 251 (336)
T 4b7c_A 221 VFFDNVGGE--------------------------ILDTVLTRIAF--KARIVLCGAIS 251 (336)
T ss_dssp EEEESSCHH--------------------------HHHHHHTTEEE--EEEEEECCCGG
T ss_pred EEEECCCcc--------------------------hHHHHHHHHhh--CCEEEEEeecc
Confidence 999999831 12334455554 58999987755
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.43 E-value=1.6e-06 Score=69.58 Aligned_cols=101 Identities=15% Similarity=0.164 Sum_probs=69.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
++++|+||+|++|..+++.+...|++|+++++++++++.+. ++ +.+. .+|.++.+- .+.+.+..+ ..+
T Consensus 168 ~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~---ga~~---~~d~~~~~~----~~~~~~~~~~~~~ 236 (343)
T 2eih_A 168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL---GADE---TVNYTHPDW----PKEVRRLTGGKGA 236 (343)
T ss_dssp CEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HH---TCSE---EEETTSTTH----HHHHHHHTTTTCE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hc---CCCE---EEcCCcccH----HHHHHHHhCCCCc
Confidence 47999999999999999999999999999999988776653 33 3332 246665432 222333322 369
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
|++|+++| .. . .+.+++.+++ .|+++.+++..+
T Consensus 237 d~vi~~~g-~~-------~------------------~~~~~~~l~~--~G~~v~~g~~~~ 269 (343)
T 2eih_A 237 DKVVDHTG-AL-------Y------------------FEGVIKATAN--GGRIAIAGASSG 269 (343)
T ss_dssp EEEEESSC-SS-------S------------------HHHHHHHEEE--EEEEEESSCCCS
T ss_pred eEEEECCC-HH-------H------------------HHHHHHhhcc--CCEEEEEecCCC
Confidence 99999999 21 0 2344455554 579999887654
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=3e-06 Score=67.28 Aligned_cols=79 Identities=18% Similarity=0.210 Sum_probs=59.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC---hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN---QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~---~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
|+++|+|+ ||+|++++..|++.|+ +|.+++|+ .++.+.+.+++..... +.+...++.+.+++.+.+
T Consensus 155 k~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l-------- 224 (315)
T 3tnl_A 155 KKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEI-------- 224 (315)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHH--------
T ss_pred CEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhh--------
Confidence 68999998 7999999999999999 89999999 8888888877765422 223334666655544332
Q ss_pred CCccEEEEcCCCC
Q 028868 77 GKLNILINNAAIA 89 (202)
Q Consensus 77 ~~id~vi~~ag~~ 89 (202)
...|+|||+....
T Consensus 225 ~~aDiIINaTp~G 237 (315)
T 3tnl_A 225 AESVIFTNATGVG 237 (315)
T ss_dssp HTCSEEEECSSTT
T ss_pred cCCCEEEECccCC
Confidence 2479999987653
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=4.6e-07 Score=72.73 Aligned_cols=78 Identities=14% Similarity=0.259 Sum_probs=57.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|+||.++++.+...|++|+++++++++++.+.+++ +.+. .+|.++.+++.+.+.++ .++.+|
T Consensus 157 ~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~---g~~~---~~d~~~~~~~~~~~~~~---~~~~~d 227 (345)
T 2j3h_A 157 ETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLTAALKRC---FPNGID 227 (345)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS---CCSE---EEETTSCSCSHHHHHHH---CTTCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCce---EEecCCHHHHHHHHHHH---hCCCCc
Confidence 57999999999999999999999999999999987776554332 3332 23666544444444433 224699
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
++|+++|
T Consensus 228 ~vi~~~g 234 (345)
T 2j3h_A 228 IYFENVG 234 (345)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=98.40 E-value=1.3e-06 Score=70.42 Aligned_cols=76 Identities=17% Similarity=0.236 Sum_probs=55.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
++++|+||+|+||.++++.+...|++|+++++++++++.+ .+ .+.+. .+|..+.+..+.+ .+..+ ..+
T Consensus 172 ~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~---~ga~~---~~d~~~~~~~~~~----~~~~~~~~~ 240 (351)
T 1yb5_A 172 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQ---NGAHE---VFNHREVNYIDKI----KKYVGEKGI 240 (351)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HH---TTCSE---EEETTSTTHHHHH----HHHHCTTCE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HH---cCCCE---EEeCCCchHHHHH----HHHcCCCCc
Confidence 5799999999999999999999999999999998877633 22 33332 2466664433333 33332 369
Q ss_pred cEEEEcCC
Q 028868 80 NILINNAA 87 (202)
Q Consensus 80 d~vi~~ag 87 (202)
|++|+++|
T Consensus 241 D~vi~~~G 248 (351)
T 1yb5_A 241 DIIIEMLA 248 (351)
T ss_dssp EEEEESCH
T ss_pred EEEEECCC
Confidence 99999998
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=98.40 E-value=6.8e-07 Score=69.59 Aligned_cols=73 Identities=12% Similarity=0.283 Sum_probs=54.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+|+ ||+|+++++.|++.|++|++++|+.++++.+.+++...+ .+. ..|. +++ .+ +..|
T Consensus 120 k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~---~~~D 182 (271)
T 1nyt_A 120 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG---HEFD 182 (271)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT---CCCS
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc---CCCC
Confidence 68999998 799999999999999999999999988888777664422 221 1232 111 11 4789
Q ss_pred EEEEcCCCCC
Q 028868 81 ILINNAAIAF 90 (202)
Q Consensus 81 ~vi~~ag~~~ 90 (202)
+||++++...
T Consensus 183 ivVn~t~~~~ 192 (271)
T 1nyt_A 183 LIINATSSGI 192 (271)
T ss_dssp EEEECCSCGG
T ss_pred EEEECCCCCC
Confidence 9999999753
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=4.8e-07 Score=62.98 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=55.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |++|..+++.|.+.|++|+++++++++.+... ..+ ...+..|.++.+.+.++ .. ...|
T Consensus 7 ~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~----~~~--~~~~~~d~~~~~~l~~~------~~-~~~d 72 (144)
T 2hmt_A 7 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSL------GI-RNFE 72 (144)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT----TTC--SEEEECCTTCHHHHHTT------TG-GGCS
T ss_pred CcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HhC--CEEEEeCCCCHHHHHhc------CC-CCCC
Confidence 35899998 99999999999999999999999976654322 222 34567898886554332 12 4689
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|++++.
T Consensus 73 ~vi~~~~~ 80 (144)
T 2hmt_A 73 YVIVAIGA 80 (144)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99999883
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=3e-06 Score=67.43 Aligned_cols=102 Identities=14% Similarity=0.112 Sum_probs=69.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
++++|+||+|++|.+.++.+...|++|+++++++++++.+. ++ +.+.. .|.++.+.. +.+.+..+ ..+
T Consensus 142 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~----~~~~~~~~~~g~ 210 (325)
T 3jyn_A 142 EIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-AL---GAWET---IDYSHEDVA----KRVLELTDGKKC 210 (325)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHH----HHHHHHTTTCCE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EeCCCccHH----HHHHHHhCCCCc
Confidence 47999999999999999999999999999999988776554 33 33222 354443333 33333332 369
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
|++++++|.. ..+.+++.+++ .|+++.++...+.
T Consensus 211 Dvvid~~g~~--------------------------~~~~~~~~l~~--~G~iv~~g~~~~~ 244 (325)
T 3jyn_A 211 PVVYDGVGQD--------------------------TWLTSLDSVAP--RGLVVSFGNASGP 244 (325)
T ss_dssp EEEEESSCGG--------------------------GHHHHHTTEEE--EEEEEECCCTTCC
T ss_pred eEEEECCChH--------------------------HHHHHHHHhcC--CCEEEEEecCCCC
Confidence 9999999941 12233445544 6899998876543
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=3.3e-06 Score=67.44 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=68.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF-QGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~-~~~i 79 (202)
++++|+||+|+||.+.++.+...|++|+++++++++++.+. + .+.+.. .|..+.+.. +.+.+.. +..+
T Consensus 150 ~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~~---~~~~~~~~~----~~~~~~~~~~g~ 218 (334)
T 3qwb_A 150 DYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-E---YGAEYL---INASKEDIL----RQVLKFTNGKGV 218 (334)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-H---TTCSEE---EETTTSCHH----HHHHHHTTTSCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-H---cCCcEE---EeCCCchHH----HHHHHHhCCCCc
Confidence 47999999999999999999999999999999988776442 2 343322 344443332 3333333 2369
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
|++++++|.. ..+.+++++++ .|++|.++...+
T Consensus 219 D~vid~~g~~--------------------------~~~~~~~~l~~--~G~iv~~G~~~~ 251 (334)
T 3qwb_A 219 DASFDSVGKD--------------------------TFEISLAALKR--KGVFVSFGNASG 251 (334)
T ss_dssp EEEEECCGGG--------------------------GHHHHHHHEEE--EEEEEECCCTTC
T ss_pred eEEEECCChH--------------------------HHHHHHHHhcc--CCEEEEEcCCCC
Confidence 9999999841 12334455554 589999887544
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.31 E-value=1.4e-05 Score=63.22 Aligned_cols=115 Identities=10% Similarity=-0.036 Sum_probs=73.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeC--ChhHHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSR--NQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r--~~~~~~~~~~~~~~~---~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
++++||||+|++|.+++..|+..|. ++++.++ ++++++....++.+. ..++.+.. | +. +
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-----------~ 66 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-----------E 66 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-----------G
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-----------H
Confidence 5799999999999999999998885 6888998 776665444444332 22222222 2 11 1
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
.+ ...|+||+.+|..... ..+. .+.+..|+..+..+++.+..+ ...+.++++|...
T Consensus 67 a~-~~aDvVi~~ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~---~p~~~viv~SNPv 122 (303)
T 1o6z_A 67 DT-AGSDVVVITAGIPRQP---GQTR---IDLAGDNAPIMEDIQSSLDEH---NDDYISLTTSNPV 122 (303)
T ss_dssp GG-TTCSEEEECCCCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHTT---CSCCEEEECCSSH
T ss_pred Hh-CCCCEEEEcCCCCCCC---CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEeCChH
Confidence 12 4689999999975321 1233 245789999888888777332 2244555555544
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=8.8e-06 Score=64.58 Aligned_cols=146 Identities=14% Similarity=0.109 Sum_probs=88.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeC--ChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSR--NQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVT 72 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r--~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~ 72 (202)
++++||||+|++|.+++..|+..|. .+++.++ ++++++....++.+. +.++.+...| ++ +.
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~-------l~ 69 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DE-------NL 69 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TT-------CG
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cc-------hH
Confidence 5799999999999999999998885 6888998 665554433333321 1222222211 00 11
Q ss_pred HHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc--------CC
Q 028868 73 SIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR--------GI 144 (202)
Q Consensus 73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~--------~~ 144 (202)
+.+ ...|+|||.||..... ..+. .+.++.|+.++..+++.+..+ ....++++|...... ++
T Consensus 70 ~al-~gaD~Vi~~Ag~~~~~---g~~r---~dl~~~N~~i~~~i~~~i~~~----~~~~vlv~SNPv~~~t~~~~k~~~~ 138 (313)
T 1hye_A 70 RII-DESDVVIITSGVPRKE---GMSR---MDLAKTNAKIVGKYAKKIAEI----CDTKIFVITNPVDVMTYKALVDSKF 138 (313)
T ss_dssp GGG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHHHHHHHHHHHHH----CCCEEEECSSSHHHHHHHHHHHHCC
T ss_pred HHh-CCCCEEEECCCCCCCC---CCcH---HHHHHHHHHHHHHHHHHHHHh----CCeEEEEecCcHHHHHHHHHHhhCc
Confidence 123 4689999999975321 1232 355889999998888887442 244666666654321 24
Q ss_pred CCChhhhh-hHHHHHHHHHHHHHHH
Q 028868 145 PSVSLYGA-YKGAMNQLTKNLACEW 168 (202)
Q Consensus 145 ~~~~~y~a-sK~a~~~~~~~la~e~ 168 (202)
|..-.++. +..--..+-..++..+
T Consensus 139 p~~rviG~gt~LD~~r~~~~la~~l 163 (313)
T 1hye_A 139 ERNQVFGLGTHLDSLRFKVAIAKFF 163 (313)
T ss_dssp CTTSEEECTTHHHHHHHHHHHHHHH
T ss_pred ChhcEEEeCccHHHHHHHHHHHHHh
Confidence 44445555 4444445555556555
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.23 E-value=7.1e-06 Score=56.65 Aligned_cols=74 Identities=12% Similarity=0.038 Sum_probs=55.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |.+|..+++.|.+.|++|++++++++..+...+. . .+.++..|.++.+.+.+. .. ...|
T Consensus 5 m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~--~~~~~~~d~~~~~~l~~~------~~-~~~d 71 (140)
T 1lss_A 5 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I--DALVINGDCTKIKTLEDA------GI-EDAD 71 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C--SSEEEESCTTSHHHHHHT------TT-TTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---c--CcEEEEcCCCCHHHHHHc------Cc-ccCC
Confidence 46899987 9999999999999999999999998766554322 1 244667888886654321 12 4689
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
++|.+.+
T Consensus 72 ~vi~~~~ 78 (140)
T 1lss_A 72 MYIAVTG 78 (140)
T ss_dssp EEEECCS
T ss_pred EEEEeeC
Confidence 9999875
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.1e-05 Score=64.88 Aligned_cols=102 Identities=9% Similarity=0.065 Sum_probs=67.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|++|...++.+...|++|+++++++++++.+. ++ +.+.. .|..+.+-.+.+ .++... ..+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~~~~~v-~~~~~~--~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DI---GAAHV---LNEKAPDFEATL-REVMKA--EQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HH---TCSEE---EETTSTTHHHHH-HHHHHH--HCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCCEE---EECCcHHHHHHH-HHHhcC--CCCc
Confidence 47999999999999999999999999999999988876654 33 33322 244443332222 222221 2699
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
+++.++|.. .++.++++++ ..|+++.+++..+
T Consensus 236 ~vid~~g~~--------------------------~~~~~~~~l~--~~G~iv~~G~~~~ 267 (349)
T 3pi7_A 236 IFLDAVTGP--------------------------LASAIFNAMP--KRARWIIYGRLDP 267 (349)
T ss_dssp EEEESSCHH--------------------------HHHHHHHHSC--TTCEEEECCCSCC
T ss_pred EEEECCCCh--------------------------hHHHHHhhhc--CCCEEEEEeccCC
Confidence 999999841 0123345554 3689999986543
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.20 E-value=7.6e-06 Score=65.92 Aligned_cols=77 Identities=21% Similarity=0.267 Sum_probs=55.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|+||.++++.+...|++|+++++++++++.+.+ + +.+.. .|..+.+..+.+.+ ..+..+|
T Consensus 169 ~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~~---~~~~~~~~~~~~~~----~~~~g~D 237 (353)
T 4dup_A 169 ESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-L---GAKRG---INYRSEDFAAVIKA----ETGQGVD 237 (353)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-H---TCSEE---EETTTSCHHHHHHH----HHSSCEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEE---EeCCchHHHHHHHH----HhCCCce
Confidence 479999999999999999999999999999999888765543 3 33322 35554433333322 2235799
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|+++|.
T Consensus 238 vvid~~g~ 245 (353)
T 4dup_A 238 IILDMIGA 245 (353)
T ss_dssp EEEESCCG
T ss_pred EEEECCCH
Confidence 99999994
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=98.19 E-value=1.1e-05 Score=63.17 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=56.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.+.+.+++......+.+...+..+ +.+.+. ..
T Consensus 128 k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~--------~~ 195 (283)
T 3jyo_A 128 DSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA--------AA 195 (283)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH--------HS
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh--------cC
Confidence 68999998 7999999999999999 79999999999988888876542222232334333 222222 35
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+|||+....
T Consensus 196 DiVInaTp~G 205 (283)
T 3jyo_A 196 DGVVNATPMG 205 (283)
T ss_dssp SEEEECSSTT
T ss_pred CEEEECCCCC
Confidence 9999988653
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=4.7e-06 Score=67.47 Aligned_cols=97 Identities=22% Similarity=0.244 Sum_probs=65.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh---hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
++++|+|| |++|..+++.+...|++|+++++++ ++.+.+ .++ +.+ .+ | .+ +-.+.+.+ .. +
T Consensus 182 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~---ga~--~v--~-~~-~~~~~~~~----~~-~ 245 (366)
T 2cdc_A 182 RKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EET---KTN--YY--N-SS-NGYDKLKD----SV-G 245 (366)
T ss_dssp CEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHH---TCE--EE--E-CT-TCSHHHHH----HH-C
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHh---CCc--ee--c-hH-HHHHHHHH----hC-C
Confidence 47999999 9999999999999999999999987 666433 333 332 22 5 44 22222222 11 4
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHH-HHHhHHHhcCCCCeEEEecCCCC
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS-QLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
.+|++|+++|... .+ +.+++.|++ .|++|.++...+
T Consensus 246 ~~d~vid~~g~~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~~ 282 (366)
T 2cdc_A 246 KFDVIIDATGADV-------------------------NILGNVIPLLGR--NGVLGLFGFSTS 282 (366)
T ss_dssp CEEEEEECCCCCT-------------------------HHHHHHGGGEEE--EEEEEECSCCCS
T ss_pred CCCEEEECCCChH-------------------------HHHHHHHHHHhc--CCEEEEEecCCC
Confidence 7999999999521 22 556666754 589999877543
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=5.8e-06 Score=66.42 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=55.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~ 78 (202)
++++|+|++|+||.++++.+... |++|+++++++++++.+. ++ +.+.. .|.++.+..+. +.+... +.
T Consensus 172 ~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~---g~~~~---~~~~~~~~~~~----~~~~~~~~~ 240 (347)
T 1jvb_A 172 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RA---GADYV---INASMQDPLAE----IRRITESKG 240 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HH---TCSEE---EETTTSCHHHH----HHHHTTTSC
T ss_pred CEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hh---CCCEE---ecCCCccHHHH----HHHHhcCCC
Confidence 57999999999999999999999 999999999988776553 33 33322 35555433322 222222 47
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|+++|.
T Consensus 241 ~d~vi~~~g~ 250 (347)
T 1jvb_A 241 VDAVIDLNNS 250 (347)
T ss_dssp EEEEEESCCC
T ss_pred ceEEEECCCC
Confidence 9999999994
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.8e-05 Score=61.55 Aligned_cols=73 Identities=11% Similarity=0.192 Sum_probs=54.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+|+ ||+|++++..|++.|++|++.+|+.++.+.+.+++...+ .+.. .|+. ++. + +..|
T Consensus 120 ~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~~---~~~-------~---~~~D 182 (272)
T 1p77_A 120 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSMD---SIP-------L---QTYD 182 (272)
T ss_dssp CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEGG---GCC-------C---SCCS
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeHH---Hhc-------c---CCCC
Confidence 67999998 799999999999999999999999999888887775422 2222 2321 110 0 3689
Q ss_pred EEEEcCCCCC
Q 028868 81 ILINNAAIAF 90 (202)
Q Consensus 81 ~vi~~ag~~~ 90 (202)
+||++++...
T Consensus 183 ivIn~t~~~~ 192 (272)
T 1p77_A 183 LVINATSAGL 192 (272)
T ss_dssp EEEECCCC--
T ss_pred EEEECCCCCC
Confidence 9999999653
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=98.13 E-value=2.1e-05 Score=63.03 Aligned_cols=76 Identities=21% Similarity=0.247 Sum_probs=53.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-Cc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~i 79 (202)
++++|+||+|+||...++.+...|++|+++++++++++.+.+ + +.+. ++ |.. ++ +.+.+.+..++ .+
T Consensus 161 ~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~---ga~~-v~--~~~--~~---~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 161 ETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-V---GADI-VL--PLE--EG---WAKAVREATGGAGV 228 (342)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSE-EE--ESS--TT---HHHHHHHHTTTSCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcE-Ee--cCc--hh---HHHHHHHHhCCCCc
Confidence 479999999999999999999999999999999888755443 3 3332 22 333 22 23333343333 69
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++++++|.
T Consensus 229 Dvvid~~g~ 237 (342)
T 4eye_A 229 DMVVDPIGG 237 (342)
T ss_dssp EEEEESCC-
T ss_pred eEEEECCch
Confidence 999999994
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.09 E-value=7.2e-05 Score=60.49 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=53.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |++|+++++.+...|++|++++|++++++.+.+.... .+.. +..+.+++.+.+ ...|
T Consensus 168 ~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~~---~~~~~~~~~~~~--------~~~D 232 (361)
T 1pjc_A 168 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAV--------AEAD 232 (361)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHH--------HTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeEe---eeCCHHHHHHHH--------cCCC
Confidence 57999999 9999999999999999999999999888776554322 1211 223344433222 2579
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
++|++++..
T Consensus 233 vVI~~~~~~ 241 (361)
T 1pjc_A 233 LLIGAVLVP 241 (361)
T ss_dssp EEEECCCCT
T ss_pred EEEECCCcC
Confidence 999999864
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=98.08 E-value=2.6e-05 Score=62.35 Aligned_cols=100 Identities=17% Similarity=0.172 Sum_probs=67.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|| |++|..+++.+...|++|+++++++++++.+. + .+.+. .+|..+.+- . +.+.+.. +.+|
T Consensus 166 ~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~---~~d~~~~~~-~---~~~~~~~-~~~d 232 (339)
T 1rjw_A 166 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-E---LGADL---VVNPLKEDA-A---KFMKEKV-GGVH 232 (339)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-H---TTCSE---EECTTTSCH-H---HHHHHHH-SSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-H---CCCCE---EecCCCccH-H---HHHHHHh-CCCC
Confidence 47999999 88999999999999999999999988776543 2 34332 246654322 2 2222223 4799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
++|+++|.. + .++.+++.+++ .|+++.+++..+
T Consensus 233 ~vid~~g~~----------~---------------~~~~~~~~l~~--~G~~v~~g~~~~ 265 (339)
T 1rjw_A 233 AAVVTAVSK----------P---------------AFQSAYNSIRR--GGACVLVGLPPE 265 (339)
T ss_dssp EEEESSCCH----------H---------------HHHHHHHHEEE--EEEEEECCCCSS
T ss_pred EEEECCCCH----------H---------------HHHHHHHHhhc--CCEEEEecccCC
Confidence 999999841 0 23444555554 578998877543
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=98.08 E-value=1.7e-05 Score=64.09 Aligned_cols=76 Identities=9% Similarity=0.101 Sum_probs=53.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|++|...++.+...|++|+++++++++++.+.+ .+.+.. .|..+.+ +. +.+.+..+..+|
T Consensus 165 ~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~Ga~~~---~~~~~~~-~~---~~~~~~~~~g~D 233 (362)
T 2c0c_A 165 KKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----LGCDRP---INYKTEP-VG---TVLKQEYPEGVD 233 (362)
T ss_dssp CEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----TTCSEE---EETTTSC-HH---HHHHHHCTTCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----cCCcEE---EecCChh-HH---HHHHHhcCCCCC
Confidence 479999999999999999999999999999999877755432 343322 2443322 22 223333334699
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
++|+++|
T Consensus 234 ~vid~~g 240 (362)
T 2c0c_A 234 VVYESVG 240 (362)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999998
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.06 E-value=2.5e-05 Score=55.19 Aligned_cols=76 Identities=13% Similarity=0.041 Sum_probs=56.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
+.++|+|+ |.+|+.+++.|.+.|++|+++++++ ++.+...+.. ...+.++..|.++++.+.++ .. ...
T Consensus 4 ~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a------~i-~~a 72 (153)
T 1id1_A 4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKA------GI-DRC 72 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHH------TT-TTC
T ss_pred CcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHc------Ch-hhC
Confidence 35889996 9999999999999999999999974 4444443332 12367888999998765443 12 367
Q ss_pred cEEEEcCC
Q 028868 80 NILINNAA 87 (202)
Q Consensus 80 d~vi~~ag 87 (202)
|.+|.+.+
T Consensus 73 d~vi~~~~ 80 (153)
T 1id1_A 73 RAILALSD 80 (153)
T ss_dssp SEEEECSS
T ss_pred CEEEEecC
Confidence 99988776
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=98.06 E-value=3e-05 Score=64.61 Aligned_cols=83 Identities=11% Similarity=0.144 Sum_probs=61.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEe--c--------CCCHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC--D--------LSSREQREKLIET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~--D--------v~~~~~i~~~~~~ 70 (202)
++++|+||+|++|...++.+...|++|+++++++++++.+ +++ |.+..+-.. | .++.++.+++.+.
T Consensus 230 ~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~l---Ga~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~ 305 (456)
T 3krt_A 230 DNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAM---GAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR 305 (456)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHH---TCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-Hhh---CCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence 4799999999999999999989999999999988777655 333 333222111 1 2455666777777
Q ss_pred HHHHhCC-CccEEEEcCC
Q 028868 71 VTSIFQG-KLNILINNAA 87 (202)
Q Consensus 71 ~~~~~~~-~id~vi~~ag 87 (202)
+++..++ .+|++|.++|
T Consensus 306 i~~~t~g~g~Dvvid~~G 323 (456)
T 3krt_A 306 IRELTGGEDIDIVFEHPG 323 (456)
T ss_dssp HHHHHTSCCEEEEEECSC
T ss_pred HHHHhCCCCCcEEEEcCC
Confidence 7776643 7999999998
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=98.05 E-value=6.3e-05 Score=59.55 Aligned_cols=78 Identities=19% Similarity=0.173 Sum_probs=56.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC---hhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN---QIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~---~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|+++|+|+ ||.|++++..|++.|+ +|.++.|+ .++.+.+.+++... +..+.. .+..+.+.+.+.+
T Consensus 149 k~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~--~~~~~l~~~~~~l------- 218 (312)
T 3t4e_A 149 KTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTV--TDLADQHAFTEAL------- 218 (312)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEE--EETTCHHHHHHHH-------
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEE--echHhhhhhHhhc-------
Confidence 68999998 8999999999999998 89999999 77888887777643 223333 4555533222222
Q ss_pred CCCccEEEEcCCCC
Q 028868 76 QGKLNILINNAAIA 89 (202)
Q Consensus 76 ~~~id~vi~~ag~~ 89 (202)
...|+|||+....
T Consensus 219 -~~~DiIINaTp~G 231 (312)
T 3t4e_A 219 -ASADILTNGTKVG 231 (312)
T ss_dssp -HHCSEEEECSSTT
T ss_pred -cCceEEEECCcCC
Confidence 2469999987654
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=98.03 E-value=1.1e-05 Score=64.56 Aligned_cols=77 Identities=19% Similarity=0.129 Sum_probs=55.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
++++|+||+|+||...++.+...|++|+++++++++++.+.+ + +.+.. .|..+.+.. +.+.+..+ ..+
T Consensus 146 ~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-l---ga~~~---~~~~~~~~~----~~~~~~~~~~g~ 214 (340)
T 3gms_A 146 DVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-L---GAAYV---IDTSTAPLY----ETVMELTNGIGA 214 (340)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EETTTSCHH----HHHHHHTTTSCE
T ss_pred CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-C---CCcEE---EeCCcccHH----HHHHHHhCCCCC
Confidence 479999999999999999988899999999999888765543 3 33322 244443332 23333332 369
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|+++|.
T Consensus 215 Dvvid~~g~ 223 (340)
T 3gms_A 215 DAAIDSIGG 223 (340)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCC
Confidence 999999994
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.7e-05 Score=64.25 Aligned_cols=71 Identities=20% Similarity=0.183 Sum_probs=56.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+|+|.|| |++|+.+++.|.+ .+.|.+.+++.++++++.+ .+..+.+|+.|.+++.+++. +.|
T Consensus 17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~~--------~~D 79 (365)
T 3abi_A 17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVMK--------EFE 79 (365)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHHT--------TCS
T ss_pred cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHHh--------CCC
Confidence 56999999 9999999998864 5799999999877765432 35567899999888766654 469
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+||++++.
T Consensus 80 vVi~~~p~ 87 (365)
T 3abi_A 80 LVIGALPG 87 (365)
T ss_dssp EEEECCCG
T ss_pred EEEEecCC
Confidence 99999874
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00012 Score=59.55 Aligned_cols=74 Identities=18% Similarity=0.179 Sum_probs=54.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |+||+++++.+...|++|++.++++++++.+.+.+ +..+. .+.++.+++.+.+. ..|
T Consensus 169 ~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~~---~~~~~~~~l~~~l~--------~aD 233 (377)
T 2vhw_A 169 ADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRIH---TRYSSAYELEGAVK--------RAD 233 (377)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSSE---EEECCHHHHHHHHH--------HCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCeeE---eccCCHHHHHHHHc--------CCC
Confidence 58999999 99999999999999999999999988776655433 22221 23445555444332 469
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
++|++++..
T Consensus 234 vVi~~~~~p 242 (377)
T 2vhw_A 234 LVIGAVLVP 242 (377)
T ss_dssp EEEECCCCT
T ss_pred EEEECCCcC
Confidence 999998854
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=2e-05 Score=63.77 Aligned_cols=98 Identities=19% Similarity=0.267 Sum_probs=67.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |++|...++.+...|++|+++++++++++.+.+++ +.+.. .|..+.+.+ .+.. +.+|
T Consensus 189 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l---Ga~~v---~~~~~~~~~-------~~~~-~~~D 253 (366)
T 1yqd_A 189 KHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF---GADSF---LVSRDQEQM-------QAAA-GTLD 253 (366)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS---CCSEE---EETTCHHHH-------HHTT-TCEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---CCceE---EeccCHHHH-------HHhh-CCCC
Confidence 47899996 99999999999999999999999988876654333 43322 355554332 2223 4799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
++|.++|... .++.+++.+++ .|+++.+++..+
T Consensus 254 ~vid~~g~~~-------------------------~~~~~~~~l~~--~G~iv~~g~~~~ 286 (366)
T 1yqd_A 254 GIIDTVSAVH-------------------------PLLPLFGLLKS--HGKLILVGAPEK 286 (366)
T ss_dssp EEEECCSSCC-------------------------CSHHHHHHEEE--EEEEEECCCCSS
T ss_pred EEEECCCcHH-------------------------HHHHHHHHHhc--CCEEEEEccCCC
Confidence 9999998531 11233445544 589999887553
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.95 E-value=2.7e-05 Score=58.28 Aligned_cols=74 Identities=14% Similarity=0.047 Sum_probs=57.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+|+ |.+|.++++.|.++|+.|+++++++++.+...+.. ++.++..|.++++.+.++ .. ...|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a------~i-~~ad 67 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDA------EV-SKND 67 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHH------TC-CTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhc------Cc-ccCC
Confidence 56899997 89999999999999999999999988776654331 356788999997765533 12 4678
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.+|.+.+
T Consensus 68 ~vi~~~~ 74 (218)
T 3l4b_C 68 VVVILTP 74 (218)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 8887665
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.94 E-value=3.4e-05 Score=53.75 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=56.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
.++|.|+ |.+|..+++.|.+.|+.|+++++++++.+.+.+ . .+.++..|.++++.++++ .. ...|.
T Consensus 9 ~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~--g~~~i~gd~~~~~~l~~a------~i-~~ad~ 74 (140)
T 3fwz_A 9 HALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R--GVRAVLGNAANEEIMQLA------HL-ECAKW 74 (140)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T--TCEEEESCTTSHHHHHHT------TG-GGCSE
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c--CCCEEECCCCCHHHHHhc------Cc-ccCCE
Confidence 5889997 899999999999999999999999887765543 2 356788999998765543 11 35788
Q ss_pred EEEcCC
Q 028868 82 LINNAA 87 (202)
Q Consensus 82 vi~~ag 87 (202)
+|.+.+
T Consensus 75 vi~~~~ 80 (140)
T 3fwz_A 75 LILTIP 80 (140)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 888766
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=97.94 E-value=0.00014 Score=58.61 Aligned_cols=80 Identities=15% Similarity=0.104 Sum_probs=55.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~ 78 (202)
+++||+|+ |++|...++.....|++ |+++++++++++.+.+ + ...+..+..|..+.+++. +++++..+ ..
T Consensus 181 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---~~~~~~~~~~~~~~~~~~---~~v~~~t~g~g 252 (363)
T 3m6i_A 181 DPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I---CPEVVTHKVERLSAEESA---KKIVESFGGIE 252 (363)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H---CTTCEEEECCSCCHHHHH---HHHHHHTSSCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---chhcccccccccchHHHH---HHHHHHhCCCC
Confidence 36899998 99999999888889997 9999999888765543 3 223444445545555543 33444332 36
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|+++.++|.
T Consensus 253 ~Dvvid~~g~ 262 (363)
T 3m6i_A 253 PAVALECTGV 262 (363)
T ss_dssp CSEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.93 E-value=7.7e-05 Score=58.24 Aligned_cols=71 Identities=14% Similarity=0.224 Sum_probs=54.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.+.+.+++...+ .+.....+ + + ....
T Consensus 127 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~--~---l-----------~~~a 188 (281)
T 3o8q_A 127 ATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE--Q---L-----------KQSY 188 (281)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG--G---C-----------CSCE
T ss_pred CEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH--H---h-----------cCCC
Confidence 68999998 7999999999999996 99999999999988888876543 34443322 1 0 0357
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+||++....
T Consensus 189 DiIInaTp~g 198 (281)
T 3o8q_A 189 DVIINSTSAS 198 (281)
T ss_dssp EEEEECSCCC
T ss_pred CEEEEcCcCC
Confidence 9999988654
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=0.00013 Score=58.39 Aligned_cols=101 Identities=13% Similarity=0.209 Sum_probs=67.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
++++|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +.+.. .|..+++ +.+.+.+..++ .
T Consensus 169 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~---Ga~~~---~~~~~~~----~~~~v~~~~~g~g 236 (348)
T 2d8a_A 169 KSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KV---GADYV---INPFEED----VVKEVMDITDGNG 236 (348)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HH---TCSEE---ECTTTSC----HHHHHHHHTTTSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh---CCCEE---ECCCCcC----HHHHHHHHcCCCC
Confidence 46899999 9999999999989999 9999999987766543 33 33221 3444322 22333333322 6
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
+|++|.++|.. ..++.+++.+++ .|+++.+++..+
T Consensus 237 ~D~vid~~g~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~~ 271 (348)
T 2d8a_A 237 VDVFLEFSGAP-------------------------KALEQGLQAVTP--AGRVSLLGLYPG 271 (348)
T ss_dssp EEEEEECSCCH-------------------------HHHHHHHHHEEE--EEEEEECCCCSS
T ss_pred CCEEEECCCCH-------------------------HHHHHHHHHHhc--CCEEEEEccCCC
Confidence 99999999841 123445555654 589999887554
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.87 E-value=3e-05 Score=61.08 Aligned_cols=73 Identities=16% Similarity=0.190 Sum_probs=53.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.+.+.+++..... ++.+.++ +.+.. ...
T Consensus 142 ~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~-------~~~~~~~-------~~~~~-~~a 205 (297)
T 2egg_A 142 KRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRS-------AYFSLAE-------AETRL-AEY 205 (297)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSC-------CEECHHH-------HHHTG-GGC
T ss_pred CEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccC-------ceeeHHH-------HHhhh-ccC
Confidence 57999998 7999999999999998 999999999888777766532111 1112222 22233 468
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+||++.+..
T Consensus 206 DivIn~t~~~ 215 (297)
T 2egg_A 206 DIIINTTSVG 215 (297)
T ss_dssp SEEEECSCTT
T ss_pred CEEEECCCCC
Confidence 9999999865
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=97.85 E-value=6.7e-05 Score=60.16 Aligned_cols=76 Identities=13% Similarity=0.184 Sum_probs=53.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|++|...++.+...|++|+++++++++++.+.+ + +.+.. .|-.+ + +.+.+.+..+..+|
T Consensus 152 ~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---i~~~~--~---~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 152 KTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-M---GADIV---LNHKE--S---LLNQFKTQGIELVD 219 (346)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-H---TCSEE---ECTTS--C---HHHHHHHHTCCCEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCcEE---EECCc--c---HHHHHHHhCCCCcc
Confidence 479999999999999999999999999999999887765543 3 33322 23322 2 22333333335799
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++.++|.
T Consensus 220 vv~d~~g~ 227 (346)
T 3fbg_A 220 YVFCTFNT 227 (346)
T ss_dssp EEEESSCH
T ss_pred EEEECCCc
Confidence 99999884
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.82 E-value=6.5e-05 Score=60.19 Aligned_cols=74 Identities=24% Similarity=0.365 Sum_probs=50.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++||+||+|++|...++.+...|++|+++ +++++++.+ .+ .+.+. +| .+.+ +.+.+.+... +..+|
T Consensus 152 ~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~---lGa~~----i~-~~~~-~~~~~~~~~~--~~g~D 218 (343)
T 3gaz_A 152 QTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RD---LGATP----ID-ASRE-PEDYAAEHTA--GQGFD 218 (343)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HH---HTSEE----EE-TTSC-HHHHHHHHHT--TSCEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HH---cCCCE----ec-cCCC-HHHHHHHHhc--CCCce
Confidence 479999999999999999999999999999 777665543 33 34443 34 3322 2222222211 23699
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++.++|
T Consensus 219 ~vid~~g 225 (343)
T 3gaz_A 219 LVYDTLG 225 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999998
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00041 Score=55.66 Aligned_cols=80 Identities=26% Similarity=0.336 Sum_probs=51.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~~~i 79 (202)
++++|+|+ |++|...++.+...|++|+++++++++++.+. +.+.+. + .|..+ .+..+++.+......+..+
T Consensus 170 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~-~--~~~~~~~~~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 170 TTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGADV-T--LVVDPAKEEESSIIERIRSAIGDLP 241 (352)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSE-E--EECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH----HhCCCE-E--EcCcccccHHHHHHHHhccccCCCC
Confidence 47999997 89999999888889999999999987776543 234432 2 24332 2222222221110012469
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.++|.
T Consensus 242 D~vid~~g~ 250 (352)
T 1e3j_A 242 NVTIDCSGN 250 (352)
T ss_dssp SEEEECSCC
T ss_pred CEEEECCCC
Confidence 999999984
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0001 Score=59.41 Aligned_cols=83 Identities=14% Similarity=0.133 Sum_probs=50.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh---CC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF---QG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~---~~ 77 (202)
++++|+||+|++|...++.+...|++|++++++.+++.+..+.+++.|.+..+ |-.+. .-.++.+++.+.. +.
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~-~~~~~~~~i~~~t~~~~~ 244 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQN-NSREFGPTIKEWIKQSGG 244 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHH-HCGGGHHHHHHHHHHHTC
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCcc-chHHHHHHHHHHhhccCC
Confidence 47999999999999988887788999999987766532222222333443222 21110 0012223333322 34
Q ss_pred CccEEEEcCC
Q 028868 78 KLNILINNAA 87 (202)
Q Consensus 78 ~id~vi~~ag 87 (202)
.+|++|.++|
T Consensus 245 g~Dvvid~~G 254 (364)
T 1gu7_A 245 EAKLALNCVG 254 (364)
T ss_dssp CEEEEEESSC
T ss_pred CceEEEECCC
Confidence 7999999998
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00014 Score=56.48 Aligned_cols=71 Identities=15% Similarity=0.195 Sum_probs=53.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|+|+ ||+|++++..|++.|+ +|.+.+|+.++.+.+.+++.. ..+.....+ + +. + ...
T Consensus 121 k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~~~--~---l~-------~---~~~ 182 (272)
T 3pwz_A 121 RRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISRYE--A---LE-------G---QSF 182 (272)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEECSG--G---GT-------T---CCC
T ss_pred CEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEeeHH--H---hc-------c---cCC
Confidence 68999998 7999999999999996 999999999998888887754 223333221 1 10 0 357
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+|||+....
T Consensus 183 DivInaTp~g 192 (272)
T 3pwz_A 183 DIVVNATSAS 192 (272)
T ss_dssp SEEEECSSGG
T ss_pred CEEEECCCCC
Confidence 9999987653
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00039 Score=55.12 Aligned_cols=118 Identities=16% Similarity=0.117 Sum_probs=73.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcCC--eEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~~--~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
+++.|+||+|.+|..++..|+..| ..|++.++++ .+....++.+... ++..... .++.++++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~-------- 66 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLG----PEQLPDCL-------- 66 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEES----GGGHHHHH--------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecC----CCCHHHHh--------
Confidence 578999999999999999999888 6899999987 3334444443221 1221100 11222222
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
...|++|+++|...... .+.. +.+..|+.....+++.+.++ ...+.++++|...+.
T Consensus 67 ~~aDvVvi~ag~~~~~g---~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~sNPv~~ 122 (314)
T 1mld_A 67 KGCDVVVIPAGVPRKPG---MTRD---DLFNTNATIVATLTAACAQH---CPDAMICIISNPVNS 122 (314)
T ss_dssp TTCSEEEECCSCCCCTT---CCGG---GGHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCHHH
T ss_pred CCCCEEEECCCcCCCCC---CcHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEECCCcch
Confidence 36799999999753221 1211 23567777666666665433 245788888776543
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00039 Score=53.22 Aligned_cols=77 Identities=16% Similarity=0.204 Sum_probs=56.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhc--CCeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNK--GFKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~--~~~v~~~~~Dv 58 (202)
++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+.+.+.+.+. ..++..+..++
T Consensus 32 ~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 32 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 57899997 7999999999999997 899999987 6777777777654 34566666666
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 59 SSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 59 ~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
++ +++.+++ ...|+||.+.+
T Consensus 111 ~~-~~~~~~~--------~~~DvVi~~~d 130 (249)
T 1jw9_B 111 DD-AELAALI--------AEHDLVLDCTD 130 (249)
T ss_dssp CH-HHHHHHH--------HTSSEEEECCS
T ss_pred CH-hHHHHHH--------hCCCEEEEeCC
Confidence 53 3333322 25799998765
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00011 Score=57.81 Aligned_cols=72 Identities=17% Similarity=0.216 Sum_probs=51.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|++|...++.+...|++|+++++++++++.+. + .+.+.. .|..+.++ +.+.+ ..+|
T Consensus 127 ~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~---~ga~~~---~~~~~~~~---~~~~~-----~~~d 191 (302)
T 1iz0_A 127 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-A---LGAEEA---ATYAEVPE---RAKAW-----GGLD 191 (302)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-H---TTCSEE---EEGGGHHH---HHHHT-----TSEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-h---cCCCEE---EECCcchh---HHHHh-----cCce
Confidence 47999999999999999999999999999999988776553 2 233322 34443111 22222 4699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|+ +|.
T Consensus 192 ~vid-~g~ 198 (302)
T 1iz0_A 192 LVLE-VRG 198 (302)
T ss_dssp EEEE-CSC
T ss_pred EEEE-CCH
Confidence 9999 884
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=4.6e-05 Score=53.95 Aligned_cols=74 Identities=12% Similarity=0.056 Sum_probs=53.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |.+|..+++.|.+.|++|++++|++++.+.+.. ..+ ...+..|.++.+.+.+. .. ...|
T Consensus 20 ~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g--~~~~~~d~~~~~~l~~~------~~-~~ad 86 (155)
T 2g1u_A 20 KYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFS--GFTVVGDAAEFETLKEC------GM-EKAD 86 (155)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCC--SEEEESCTTSHHHHHTT------TG-GGCS
T ss_pred CcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCC--CcEEEecCCCHHHHHHc------Cc-ccCC
Confidence 46899997 999999999999999999999999877644321 122 34566788876543321 12 3579
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
++|.+.+
T Consensus 87 ~Vi~~~~ 93 (155)
T 2g1u_A 87 MVFAFTN 93 (155)
T ss_dssp EEEECSS
T ss_pred EEEEEeC
Confidence 9999877
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.69 E-value=2.9e-05 Score=54.32 Aligned_cols=70 Identities=13% Similarity=0.154 Sum_probs=51.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|+|+ |++|+++++.|.+.|++|.+.+|++++.+.+.+++. ..+ . +..+ +.+.+ ...|
T Consensus 22 ~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~--~--~~~~---~~~~~--------~~~D 82 (144)
T 3oj0_A 22 NKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEY--V--LIND---IDSLI--------KNND 82 (144)
T ss_dssp CEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEE--E--ECSC---HHHHH--------HTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---Cce--E--eecC---HHHHh--------cCCC
Confidence 57999997 999999999999999999999999988877766653 111 1 2222 22222 2469
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
++|.+.+..
T Consensus 83 ivi~at~~~ 91 (144)
T 3oj0_A 83 VIITATSSK 91 (144)
T ss_dssp EEEECSCCS
T ss_pred EEEEeCCCC
Confidence 999988754
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.66 E-value=7e-05 Score=54.38 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=54.2
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|.|+ |.+|..+++.|.+. |++|+++++++++.+.+. +.+ +..+..|.++.+.+.++ ... ...|
T Consensus 41 ~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g--~~~~~gd~~~~~~l~~~-----~~~-~~ad 107 (183)
T 3c85_A 41 QVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEG--RNVISGDATDPDFWERI-----LDT-GHVK 107 (183)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTT--CCEEECCTTCHHHHHTB-----CSC-CCCC
T ss_pred cEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCC--CCEEEcCCCCHHHHHhc-----cCC-CCCC
Confidence 5788985 89999999999999 999999999987765543 223 45667898887654322 012 4689
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.+|.+.+
T Consensus 108 ~vi~~~~ 114 (183)
T 3c85_A 108 LVLLAMP 114 (183)
T ss_dssp EEEECCS
T ss_pred EEEEeCC
Confidence 9998776
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=4.2e-05 Score=61.26 Aligned_cols=99 Identities=12% Similarity=0.092 Sum_probs=64.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|+|| |++|...++.+...|+ +|+++++++++++.+.+ + .+. + .|..++ ++.+.+.++ .+..+
T Consensus 166 ~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~~-v--~~~~~~-~~~~~~~~~---~~~g~ 232 (343)
T 2dq4_A 166 KSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----ADR-L--VNPLEE-DLLEVVRRV---TGSGV 232 (343)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CSE-E--ECTTTS-CHHHHHHHH---HSSCE
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HHh-c--cCcCcc-CHHHHHHHh---cCCCC
Confidence 36899999 9999999998888999 99999999877654422 1 111 1 344432 233333332 23579
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
|++|.++|. . ..++.+++.+++ .|+++.++...
T Consensus 233 D~vid~~g~----------~---------------~~~~~~~~~l~~--~G~iv~~g~~~ 265 (343)
T 2dq4_A 233 EVLLEFSGN----------E---------------AAIHQGLMALIP--GGEARILGIPS 265 (343)
T ss_dssp EEEEECSCC----------H---------------HHHHHHHHHEEE--EEEEEECCCCS
T ss_pred CEEEECCCC----------H---------------HHHHHHHHHHhc--CCEEEEEecCC
Confidence 999999984 0 113444555554 57899887643
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.0005 Score=55.79 Aligned_cols=77 Identities=18% Similarity=0.208 Sum_probs=52.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCC--CHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS--SREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~--~~~~i~~~~~~~~~~~~~ 77 (202)
+++||+| +|++|...++.+...| ++|+++++++++++.+. + .+.+. + .|.. +.+++ .+.+.+..++
T Consensus 197 ~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~-v--i~~~~~~~~~~---~~~v~~~~~g 265 (380)
T 1vj0_A 197 KTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E---IGADL-T--LNRRETSVEER---RKAIMDITHG 265 (380)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H---TTCSE-E--EETTTSCHHHH---HHHHHHHTTT
T ss_pred CEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-H---cCCcE-E--EeccccCcchH---HHHHHHHhCC
Confidence 4799999 8999999999888899 59999999988776543 2 34332 2 2333 13333 3334443333
Q ss_pred -CccEEEEcCCC
Q 028868 78 -KLNILINNAAI 88 (202)
Q Consensus 78 -~id~vi~~ag~ 88 (202)
.+|++|.++|.
T Consensus 266 ~g~Dvvid~~g~ 277 (380)
T 1vj0_A 266 RGADFILEATGD 277 (380)
T ss_dssp SCEEEEEECSSC
T ss_pred CCCcEEEECCCC
Confidence 69999999984
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00058 Score=54.55 Aligned_cols=99 Identities=21% Similarity=0.276 Sum_probs=63.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
++++|+|+ |++|...++.+... |++|+++++++++++.+. ++ +.+.. .|..+. .+...++.+ +..
T Consensus 172 ~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~---~~~~~~~~~--g~g 238 (344)
T 2h6e_A 172 PVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-EL---GADYV---SEMKDA---ESLINKLTD--GLG 238 (344)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HH---TCSEE---ECHHHH---HHHHHHHHT--TCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-Hh---CCCEE---eccccc---hHHHHHhhc--CCC
Confidence 47999999 89999998888888 999999999988776553 33 33221 132220 122333322 237
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
+|++|.++|.. ..++.+++.+++ .|+++.++...
T Consensus 239 ~D~vid~~g~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~~ 272 (344)
T 2h6e_A 239 ASIAIDLVGTE-------------------------ETTYNLGKLLAQ--EGAIILVGMEG 272 (344)
T ss_dssp EEEEEESSCCH-------------------------HHHHHHHHHEEE--EEEEEECCCCS
T ss_pred ccEEEECCCCh-------------------------HHHHHHHHHhhc--CCEEEEeCCCC
Confidence 99999999841 122344455554 58899887654
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0015 Score=50.79 Aligned_cols=42 Identities=24% Similarity=0.163 Sum_probs=36.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE 43 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~ 43 (202)
|++.|.|+ |.+|..+|+.|++.|++|++.+++++.++...+.
T Consensus 5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (283)
T 4e12_A 5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR 46 (283)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence 46888887 7999999999999999999999999887776654
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0002 Score=56.89 Aligned_cols=75 Identities=23% Similarity=0.212 Sum_probs=50.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++|+||+|++|...++.+...|++|+.+++++++++.+. + .+.+.. .|..+.+ .+... +..++.+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~---lGa~~~---i~~~~~~--~~~~~---~~~~~~~d~ 219 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-V---LGAKEV---LAREDVM--AERIR---PLDKQRWAA 219 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-H---TTCSEE---EECC--------------CCSCCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-H---cCCcEE---EecCCcH--HHHHH---HhcCCcccE
Confidence 6999999999999999988889999999999987776553 2 343322 2444332 11122 212246999
Q ss_pred EEEcCCC
Q 028868 82 LINNAAI 88 (202)
Q Consensus 82 vi~~ag~ 88 (202)
+|.++|.
T Consensus 220 vid~~g~ 226 (328)
T 1xa0_A 220 AVDPVGG 226 (328)
T ss_dssp EEECSTT
T ss_pred EEECCcH
Confidence 9999984
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00032 Score=56.76 Aligned_cols=74 Identities=18% Similarity=0.284 Sum_probs=50.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|++|...++.+...|++|+.++ ++++.+.+ . +.+.+.. .|..+.+.. +.+.+. ..+|
T Consensus 185 ~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~-~---~lGa~~v---~~~~~~~~~----~~~~~~--~g~D 250 (375)
T 2vn8_A 185 KRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELV-R---KLGADDV---IDYKSGSVE----EQLKSL--KPFD 250 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-H---HTTCSEE---EETTSSCHH----HHHHTS--CCBS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHH-H---HcCCCEE---EECCchHHH----HHHhhc--CCCC
Confidence 4799999999999999998888999999988 45554433 3 3344322 244443222 223222 4699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|.++|.
T Consensus 251 ~vid~~g~ 258 (375)
T 2vn8_A 251 FILDNVGG 258 (375)
T ss_dssp EEEESSCT
T ss_pred EEEECCCC
Confidence 99999985
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00053 Score=54.76 Aligned_cols=117 Identities=11% Similarity=0.065 Sum_probs=73.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--E-----EEEEeCCh--hHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA--I-----VHTCSRNQ--IELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~--~-----Vi~~~r~~--~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
++.||||+|+||.+++..|+..|. + +++++.++ ++++....++.+.. ....- ..+++ + .
T Consensus 5 kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~--~~~~~--~-------~ 73 (333)
T 5mdh_A 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKD--VIATD--K-------E 73 (333)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEE--EEEES--C-------H
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCC--EEEcC--C-------c
Confidence 689999999999999999998775 4 89999864 46666666676532 11111 11111 1 1
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCC-eEEEecCCCC
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNG-SIVFISSVGG 140 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~-~iv~vsS~~~ 140 (202)
.+.+ ..-|++|+.||.... +- .+ -.+.++.|+.....+++.+ .+. ..+ .++++|....
T Consensus 74 ~~~~-~daDvVvitAg~prk-pG--~t---R~dll~~N~~i~~~i~~~i----~~~~~~~~~vivvsNPvd 133 (333)
T 5mdh_A 74 EIAF-KDLDVAILVGSMPRR-DG--ME---RKDLLKANVKIFKCQGAAL----DKYAKKSVKVIVVGNPAN 133 (333)
T ss_dssp HHHT-TTCSEEEECCSCCCC-TT--CC---TTTTHHHHHHHHHHHHHHH----HHHSCTTCEEEECSSSHH
T ss_pred HHHh-CCCCEEEEeCCCCCC-CC--CC---HHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEEcCCchH
Confidence 1112 468999999986532 21 12 2345667887766666655 433 345 5888887653
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0014 Score=53.00 Aligned_cols=77 Identities=16% Similarity=0.135 Sum_probs=51.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~~~ 78 (202)
++++|+|+ |++|...++.+...|+ +|+++++++++++.+. + .+.+.. .|..+ .+++.+.+. +..++.
T Consensus 194 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~~~~---~~~~~g 262 (374)
T 1cdo_A 194 STCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-V---FGATDF---VNPNDHSEPISQVLS---KMTNGG 262 (374)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCCEE---ECGGGCSSCHHHHHH---HHHTSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-H---hCCceE---EeccccchhHHHHHH---HHhCCC
Confidence 47899996 8999999998888999 8999999988876553 2 343322 23332 112333332 222347
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 263 ~D~vid~~g~ 272 (374)
T 1cdo_A 263 VDFSLECVGN 272 (374)
T ss_dssp BSEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00094 Score=52.29 Aligned_cols=86 Identities=14% Similarity=0.241 Sum_probs=62.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh------------------hHHHHHHHHHHhc--CCeEEEEEecCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ------------------IELDARLHEWKNK--GFKVTGSVCDLS 59 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~------------------~~~~~~~~~~~~~--~~~v~~~~~Dv~ 59 (202)
++|+|.|+ ||+|.++++.|+..|. ++.++|.+. .|.+.+.+.+.+. ..++..+..+++
T Consensus 37 ~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~~l~ 115 (292)
T 3h8v_A 37 FAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNYNIT 115 (292)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECCCTT
T ss_pred CeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecccCC
Confidence 46899998 7999999999999997 899998765 4555555555544 456777778888
Q ss_pred CHHHHHHHHHHHHHHh---CCCccEEEEcCC
Q 028868 60 SREQREKLIETVTSIF---QGKLNILINNAA 87 (202)
Q Consensus 60 ~~~~i~~~~~~~~~~~---~~~id~vi~~ag 87 (202)
+.++++.+++.+.... ....|+||.+..
T Consensus 116 ~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D 146 (292)
T 3h8v_A 116 TVENFQHFMDRISNGGLEEGKPVDLVLSCVD 146 (292)
T ss_dssp SHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred cHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence 7777777766543211 025788887654
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.0011 Score=51.32 Aligned_cols=42 Identities=29% Similarity=0.281 Sum_probs=38.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
|+++|+|+ ||.|++++..|.+.|.+|.+..|+.++.+.+. ++
T Consensus 119 k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~ 160 (269)
T 3phh_A 119 QNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL 160 (269)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC
Confidence 68999997 89999999999999999999999999888777 54
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00023 Score=52.82 Aligned_cols=43 Identities=28% Similarity=0.400 Sum_probs=37.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE 43 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~ 43 (202)
+++.|+||+|.+|.++++.|++.|++|.+.+|++++.+...+.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~ 43 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE 43 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 5789999999999999999999999999999998877665544
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0017 Score=52.40 Aligned_cols=77 Identities=14% Similarity=0.108 Sum_probs=51.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~~~ 78 (202)
++++|+|+ |++|...++.+...|+ +|+++++++++++.+. + .+.+.. .|..+ .+++.+ .+.+..++.
T Consensus 197 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~~~---~v~~~~~~g 265 (376)
T 1e3i_A 197 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-A---LGATDC---LNPRELDKPVQD---VITELTAGG 265 (376)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHH---HHHHHHTSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCcEE---EccccccchHHH---HHHHHhCCC
Confidence 47999996 8999999988888999 8999999988876553 2 343322 23322 112222 222322347
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 266 ~Dvvid~~G~ 275 (376)
T 1e3i_A 266 VDYSLDCAGT 275 (376)
T ss_dssp BSEEEESSCC
T ss_pred ccEEEECCCC
Confidence 9999999984
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.002 Score=51.94 Aligned_cols=77 Identities=16% Similarity=0.156 Sum_probs=51.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~~~ 78 (202)
+++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +.+.. .|..+ .+++. +.+.+..++.
T Consensus 192 ~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~~~~~---~~v~~~~~~g 260 (373)
T 2fzw_A 192 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EF---GATEC---INPQDFSKPIQ---EVLIEMTDGG 260 (373)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HH---TCSEE---ECGGGCSSCHH---HHHHHHTTSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-Hc---CCceE---eccccccccHH---HHHHHHhCCC
Confidence 47999996 8999999988888899 8999999988876554 33 33222 23322 11222 2333333347
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 261 ~D~vid~~g~ 270 (373)
T 2fzw_A 261 VDYSFECIGN 270 (373)
T ss_dssp BSEEEECSCC
T ss_pred CCEEEECCCc
Confidence 9999999984
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0011 Score=53.42 Aligned_cols=100 Identities=19% Similarity=0.168 Sum_probs=65.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-Cc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~i 79 (202)
++++|+| +|++|...++.+...|++|+++++++++++.+ +++ +.+.. .| .+.+++.+ .+.+..++ .+
T Consensus 191 ~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~l---Ga~~v---i~-~~~~~~~~---~v~~~~~g~g~ 258 (363)
T 3uog_A 191 DRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FAL---GADHG---IN-RLEEDWVE---RVYALTGDRGA 258 (363)
T ss_dssp CEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHH---TCSEE---EE-TTTSCHHH---HHHHHHTTCCE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHc---CCCEE---Ec-CCcccHHH---HHHHHhCCCCc
Confidence 4799999 79999999998888999999999998877664 333 33322 24 33223322 23332223 69
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
|+++.++|.. . ++.+++.+++ .|+++.++...+
T Consensus 259 D~vid~~g~~--------~------------------~~~~~~~l~~--~G~iv~~G~~~~ 291 (363)
T 3uog_A 259 DHILEIAGGA--------G------------------LGQSLKAVAP--DGRISVIGVLEG 291 (363)
T ss_dssp EEEEEETTSS--------C------------------HHHHHHHEEE--EEEEEEECCCSS
T ss_pred eEEEECCChH--------H------------------HHHHHHHhhc--CCEEEEEecCCC
Confidence 9999999821 1 1233445544 689999887654
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0028 Score=51.19 Aligned_cols=77 Identities=16% Similarity=0.169 Sum_probs=51.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~~~ 78 (202)
++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. + .+.+.. .|..+ .+++.+ .+.+..++.
T Consensus 193 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~~~~~~~---~~~~~~~~g 261 (374)
T 2jhf_A 193 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-E---VGATEC---VNPQDYKKPIQE---VLTEMSNGG 261 (374)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCHHH---HHHHHTTSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-H---hCCceE---ecccccchhHHH---HHHHHhCCC
Confidence 47999995 8999999998888999 8999999988876553 2 343322 23332 112222 233333347
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 262 ~D~vid~~g~ 271 (374)
T 2jhf_A 262 VDFSFEVIGR 271 (374)
T ss_dssp BSEEEECSCC
T ss_pred CcEEEECCCC
Confidence 9999999984
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00034 Score=55.25 Aligned_cols=82 Identities=11% Similarity=0.018 Sum_probs=50.3
Q ss_pred chHHHHHHHHHHCCCEEEEEeCChhHH--------HHHHHHHHh---cCCeEEEEEecCCCHHHHHHHHHHH--------
Q 028868 11 GIGHATVEELARFGAIVHTCSRNQIEL--------DARLHEWKN---KGFKVTGSVCDLSSREQREKLIETV-------- 71 (202)
Q Consensus 11 giG~a~a~~l~~~g~~Vi~~~r~~~~~--------~~~~~~~~~---~~~~v~~~~~Dv~~~~~i~~~~~~~-------- 71 (202)
-+|.++|++++++|+.|+++.+..... ....+.+.. ....+..+..|+.....+.+++...
T Consensus 66 kmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~ 145 (313)
T 1p9o_A 66 RRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPALSGLLSLEAEENALPGFAEALRSYQEAAAAGT 145 (313)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccccccccceeeeccccHHHHHHHHHHHhhhhcccc
Confidence 399999999999999999988743210 011111110 1122445666666655555444332
Q ss_pred ----------------------HHHhCCCccEEEEcCCCCCCCC
Q 028868 72 ----------------------TSIFQGKLNILINNAAIAFVKP 93 (202)
Q Consensus 72 ----------------------~~~~~~~id~vi~~ag~~~~~~ 93 (202)
.+.+ ++.|++|++|+++...+
T Consensus 146 l~~i~f~tv~eyl~~L~~~~~~l~~~-~~~di~i~aAAVsDf~~ 188 (313)
T 1p9o_A 146 FLVVEFTTLADYLHLLQAAAQALNPL-GPSAMFYLAAAVSDFYV 188 (313)
T ss_dssp EEEEEECBHHHHHHHHHHHHHHHGGG-GGGEEEEECSBCCSEEC
T ss_pred ceeeccccHHHHHHHHHHhhHHhhcc-CCCCEEEECCchhhccC
Confidence 1334 57899999999987664
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0013 Score=53.06 Aligned_cols=101 Identities=26% Similarity=0.348 Sum_probs=65.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH---HhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS---IFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~---~~~ 76 (202)
+++||+|+ |++|...++.+...|+ +|+++++++++.+.+ +++ |.+.. .|.++.+. .+.+.+ ..+
T Consensus 184 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l---Ga~~v---i~~~~~~~----~~~i~~~~~~~~ 251 (370)
T 4ej6_A 184 STVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEV---GATAT---VDPSAGDV----VEAIAGPVGLVP 251 (370)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHH---TCSEE---ECTTSSCH----HHHHHSTTSSST
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHc---CCCEE---ECCCCcCH----HHHHHhhhhccC
Confidence 47899998 8999999888888999 899999998776543 333 33322 24444322 233333 233
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
+.+|++|.++|.. ..++.+++.++. +|+++.++...+
T Consensus 252 gg~Dvvid~~G~~-------------------------~~~~~~~~~l~~--~G~vv~~G~~~~ 288 (370)
T 4ej6_A 252 GGVDVVIECAGVA-------------------------ETVKQSTRLAKA--GGTVVILGVLPQ 288 (370)
T ss_dssp TCEEEEEECSCCH-------------------------HHHHHHHHHEEE--EEEEEECSCCCT
T ss_pred CCCCEEEECCCCH-------------------------HHHHHHHHHhcc--CCEEEEEeccCC
Confidence 5799999998841 122344455554 589998876543
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00096 Score=53.92 Aligned_cols=76 Identities=18% Similarity=0.256 Sum_probs=52.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|++|...++.+...|++|+.+. ++++++.+ . +.|.+.. .|-.+.+ +.+.+++..++.+|
T Consensus 166 ~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~-~---~lGa~~v---i~~~~~~----~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 166 VYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA-K---SRGAEEV---FDYRAPN----LAQTIRTYTKNNLR 233 (371)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-H---HTTCSEE---EETTSTT----HHHHHHHHTTTCCC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHH-H---HcCCcEE---EECCCch----HHHHHHHHccCCcc
Confidence 3699999999999999999889999999887 56665433 3 3343322 2444432 33344444445699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++.++|.
T Consensus 234 ~v~d~~g~ 241 (371)
T 3gqv_A 234 YALDCITN 241 (371)
T ss_dssp EEEESSCS
T ss_pred EEEECCCc
Confidence 99999994
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0064 Score=48.35 Aligned_cols=115 Identities=11% Similarity=0.011 Sum_probs=75.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++.+. +.++.....|. +.
T Consensus 6 ~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~--------------~a 70 (326)
T 3pqe_A 6 NKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY--------------ED 70 (326)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG--------------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH--------------HH
Confidence 46899997 9999999999999986 8999999998888766666543 12233322220 11
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
+ ..-|++|.++|.... + ..+. .+.++.|..-...+.+.+.++ ...+.++++|....
T Consensus 71 ~-~~aDvVvi~ag~p~k-p--G~~R---~dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvtNPvd 126 (326)
T 3pqe_A 71 C-KDADIVCICAGANQK-P--GETR---LELVEKNLKIFKGIVSEVMAS---GFDGIFLVATNPVD 126 (326)
T ss_dssp G-TTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred h-CCCCEEEEecccCCC-C--CccH---HHHHHHHHHHHHHHHHHHHHh---cCCeEEEEcCChHH
Confidence 2 468999999996432 2 1232 245667776555555554332 24567888887654
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00094 Score=53.84 Aligned_cols=75 Identities=17% Similarity=0.199 Sum_probs=50.8
Q ss_pred EEEEecCCCchHHHHHHHHHH-CCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~-~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|+||+|++|...++.+.. .|++|+++++++++++.+. +.|.+.. .|-.+ + +.+.+.+..++.+|
T Consensus 174 ~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~----~lGad~v---i~~~~--~---~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 174 AILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK----SLGAHHV---IDHSK--P---LAAEVAALGLGAPA 241 (363)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH----HTTCSEE---ECTTS--C---HHHHHHTTCSCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH----HcCCCEE---EeCCC--C---HHHHHHHhcCCCce
Confidence 689999999999887766555 4889999999987776543 2344322 23332 2 23334443335799
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++.++|.
T Consensus 242 vvid~~g~ 249 (363)
T 4dvj_A 242 FVFSTTHT 249 (363)
T ss_dssp EEEECSCH
T ss_pred EEEECCCc
Confidence 99999883
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00065 Score=54.44 Aligned_cols=118 Identities=12% Similarity=0.128 Sum_probs=71.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
+++.|+|++|.+|.++|..++.+|. +|++.+.++++++....++.+.... ..++.-.++.. +.+ ..
T Consensus 9 ~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~----~~~i~~t~d~~-------~al-~d 76 (343)
T 3fi9_A 9 EKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE----GLNLTFTSDIK-------EAL-TD 76 (343)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT----TCCCEEESCHH-------HHH-TT
T ss_pred CEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC----CCceEEcCCHH-------HHh-CC
Confidence 4789999999999999999999984 8999999998887766666543110 01111001111 112 36
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCe-EEEecCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGS-IVFISSVG 139 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~-iv~vsS~~ 139 (202)
-|++|.++|.... + ..+ =.+.++.|+.-...+.+.+.++ ...+. ++++|...
T Consensus 77 ADvVvitaG~p~k-p--G~~---R~dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvsNPv 129 (343)
T 3fi9_A 77 AKYIVSSGGAPRK-E--GMT---REDLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIFNPA 129 (343)
T ss_dssp EEEEEECCC----------C---HHHHHHHHHHHHHHHHHHHHHH---CTTCCEEEECSSSH
T ss_pred CCEEEEccCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh---ccCcEEEEEecCch
Confidence 7999999996422 1 122 2345667776555555544322 23453 67777654
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0069 Score=47.44 Aligned_cols=115 Identities=9% Similarity=-0.017 Sum_probs=71.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++.|+|| |.+|.+++..|+..|. +|++.++++++++....++.+. .....+...+ |. +.
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~--d~-----------~a 66 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY-----------SL 66 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CG-----------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeC--CH-----------HH
Confidence 57899999 9999999999999987 8999999998876443333321 1222222111 11 11
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG 140 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 140 (202)
+ ..-|++|.++|..... ..+.. +.++.|..-...+.+.+ .+. ..+.++++|....
T Consensus 67 ~-~~aDiVViaag~~~kp---G~~R~---dl~~~N~~i~~~i~~~i----~~~~p~a~iivvsNPvd 122 (294)
T 1oju_A 67 L-KGSEIIVVTAGLARKP---GMTRL---DLAHKNAGIIKDIAKKI----VENAPESKILVVTNPMD 122 (294)
T ss_dssp G-TTCSEEEECCCCCCCS---SCCHH---HHHHHHHHHHHHHHHHH----HTTSTTCEEEECSSSHH
T ss_pred h-CCCCEEEECCCCCCCC---CCcHH---HHHHHHHHHHHHHHHHH----HhhCCCeEEEEeCCcch
Confidence 2 3579999999975321 13332 34666655444444443 433 4577888877653
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0014 Score=52.65 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=51.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
++++|+|| |++|...++.+... |++|+++++++++++.+. + .|.+.. .|..+. +.+.+. +..++ .
T Consensus 188 ~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~---lGa~~v---i~~~~~--~~~~v~---~~~~g~g 254 (359)
T 1h2b_A 188 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-R---LGADHV---VDARRD--PVKQVM---ELTRGRG 254 (359)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-H---TTCSEE---EETTSC--HHHHHH---HHTTTCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-H---hCCCEE---Eeccch--HHHHHH---HHhCCCC
Confidence 47999999 89999998888788 999999999987776553 2 343322 244442 222222 22223 6
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 255 ~Dvvid~~G~ 264 (359)
T 1h2b_A 255 VNVAMDFVGS 264 (359)
T ss_dssp EEEEEESSCC
T ss_pred CcEEEECCCC
Confidence 9999999984
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0082 Score=47.82 Aligned_cols=116 Identities=9% Similarity=-0.000 Sum_probs=76.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|+ |.+|.+++..|+.+|. .|++.+.++++++....++.+.. ........+ |. + .+
T Consensus 20 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~-------~----~~ 85 (331)
T 4aj2_A 20 NKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DY-------S----VT 85 (331)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SG-------G----GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CH-------H----Hh
Confidence 46889998 8999999999999987 89999999988888777776431 111122111 11 1 12
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
..-|++|.++|.... | .++. .+.++.|..-...+.+.+.++ ...+.++++|....
T Consensus 86 -~~aDiVvi~aG~~~k-p--G~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPvd 140 (331)
T 4aj2_A 86 -ANSKLVIITAGARQQ-E--GESR---LNLVQRNVNIFKFIIPNVVKY---SPQCKLLIVSNPVD 140 (331)
T ss_dssp -TTEEEEEECCSCCCC-T--TCCG---GGGHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred -CCCCEEEEccCCCCC-C--CccH---HHHHHHHHHHHHHHHHHHHHH---CCCeEEEEecChHH
Confidence 468999999997532 2 1222 245667766555555555332 34578888887654
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00048 Score=55.36 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=48.7
Q ss_pred CEEEEecCCCchHHHH-HHHH-HHCCCE-EEEEeCChh---HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHAT-VEEL-ARFGAI-VHTCSRNQI---ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~-a~~l-~~~g~~-Vi~~~r~~~---~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
++++|+|| |++|... ++.+ ...|++ |+.++++++ +++.+. + .+.+. + |..+.+ +.+ +.++
T Consensus 174 ~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~---lGa~~--v--~~~~~~-~~~-i~~~--- 239 (357)
T 2b5w_A 174 SSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-E---LDATY--V--DSRQTP-VED-VPDV--- 239 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-H---TTCEE--E--ETTTSC-GGG-HHHH---
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-H---cCCcc--c--CCCccC-HHH-HHHh---
Confidence 47999999 9999998 6665 567997 999999887 665543 2 34332 2 444322 222 2222
Q ss_pred hCCCccEEEEcCCC
Q 028868 75 FQGKLNILINNAAI 88 (202)
Q Consensus 75 ~~~~id~vi~~ag~ 88 (202)
++.+|++|.++|.
T Consensus 240 -~gg~Dvvid~~g~ 252 (357)
T 2b5w_A 240 -YEQMDFIYEATGF 252 (357)
T ss_dssp -SCCEEEEEECSCC
T ss_pred -CCCCCEEEECCCC
Confidence 2479999999983
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0012 Score=52.69 Aligned_cols=100 Identities=16% Similarity=0.210 Sum_probs=65.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |++|...++.+...|++|+++++++++++.+. +.+.+.. .|-.+.+..+. +.+.. +.+|
T Consensus 168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---i~~~~~~~~~~----~~~~~-g~~d 234 (340)
T 3s2e_A 168 QWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR----RLGAEVA---VNARDTDPAAW----LQKEI-GGAH 234 (340)
T ss_dssp SEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEE---EETTTSCHHHH----HHHHH-SSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----HcCCCEE---EeCCCcCHHHH----HHHhC-CCCC
Confidence 47899997 89999999888889999999999988776543 2344332 24444333222 22233 5799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
.++.++|.. + .++.+++.++. .|+++.++...+
T Consensus 235 ~vid~~g~~----------~---------------~~~~~~~~l~~--~G~iv~~G~~~~ 267 (340)
T 3s2e_A 235 GVLVTAVSP----------K---------------AFSQAIGMVRR--GGTIALNGLPPG 267 (340)
T ss_dssp EEEESSCCH----------H---------------HHHHHHHHEEE--EEEEEECSCCSS
T ss_pred EEEEeCCCH----------H---------------HHHHHHHHhcc--CCEEEEeCCCCC
Confidence 999998731 1 12334455544 588988876543
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00033 Score=58.45 Aligned_cols=74 Identities=11% Similarity=0.122 Sum_probs=57.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|.|+ |.+|..+|+.|.++|+.|++++++++.++.+.+.+ ++..+..|.++++.++++=- ..-|
T Consensus 4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi-------~~ad 70 (461)
T 4g65_A 4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGA-------QDAD 70 (461)
T ss_dssp EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTT-------TTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCC-------CcCC
Confidence 56888888 79999999999999999999999998887766543 47788899999777655421 3567
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
++|-..+
T Consensus 71 ~~ia~t~ 77 (461)
T 4g65_A 71 MLVAVTN 77 (461)
T ss_dssp EEEECCS
T ss_pred EEEEEcC
Confidence 7776444
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00085 Score=54.99 Aligned_cols=69 Identities=16% Similarity=0.253 Sum_probs=50.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|.|+ |++|+.+++.+...|+ +|++++|+.++.....+++ +.. . .+. +++.+.+ ...
T Consensus 168 ~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~--~--~~~---~~l~~~l--------~~a 228 (404)
T 1gpj_A 168 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGE--A--VRF---DELVDHL--------ARS 228 (404)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCE--E--CCG---GGHHHHH--------HTC
T ss_pred CEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCc--e--ecH---HhHHHHh--------cCC
Confidence 57999998 9999999999999999 9999999988776665554 222 1 122 2222222 247
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+||.+.+.
T Consensus 229 DvVi~at~~ 237 (404)
T 1gpj_A 229 DVVVSATAA 237 (404)
T ss_dssp SEEEECCSS
T ss_pred CEEEEccCC
Confidence 999998764
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0025 Score=51.14 Aligned_cols=77 Identities=22% Similarity=0.223 Sum_probs=51.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCC--CHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS--SREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~--~~~~i~~~~~~~~~~~~~ 77 (202)
++++|+|+ |++|...++.+...|+ +|+++++++++++.+. + .+.+. + .|.. +.++ ..+++.+..+.
T Consensus 173 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~-v--i~~~~~~~~~---~~~~i~~~~~~ 241 (356)
T 1pl8_A 173 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E---IGADL-V--LQISKESPQE---IARKVEGQLGC 241 (356)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCSE-E--EECSSCCHHH---HHHHHHHHHTS
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-H---hCCCE-E--EcCcccccch---HHHHHHHHhCC
Confidence 47899996 8999999888888999 8999999987765543 2 34332 2 2433 2222 23333333334
Q ss_pred CccEEEEcCCC
Q 028868 78 KLNILINNAAI 88 (202)
Q Consensus 78 ~id~vi~~ag~ 88 (202)
.+|++|.++|.
T Consensus 242 g~D~vid~~g~ 252 (356)
T 1pl8_A 242 KPEVTIECTGA 252 (356)
T ss_dssp CCSEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 69999999983
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.005 Score=48.94 Aligned_cols=114 Identities=10% Similarity=0.029 Sum_probs=67.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++.+.. ..+.....| .+.+
T Consensus 10 ~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~--------------~~a~ 74 (326)
T 3vku_A 10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE--------------YSDA 74 (326)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC--------------GGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc--------------HHHh
Confidence 46899997 9999999999999887 89999999988887777776432 122222111 1123
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG 140 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 140 (202)
..-|++|.++|.... + ..+ =.+.++.|..-...+.+.+ .+. ..+.++++|....
T Consensus 75 -~~aDiVvi~ag~~~k-p--G~t---R~dL~~~N~~I~~~i~~~i----~~~~p~a~ilvvtNPvd 129 (326)
T 3vku_A 75 -KDADLVVITAGAPQK-P--GET---RLDLVNKNLKILKSIVDPI----VDSGFNGIFLVAANPVD 129 (326)
T ss_dssp -TTCSEEEECCCCC----------------------CHHHHHHHH----HTTTCCSEEEECSSSHH
T ss_pred -cCCCEEEECCCCCCC-C--Cch---HHHHHHHHHHHHHHHHHHH----HhcCCceEEEEccCchH
Confidence 468999999997432 1 111 2345566766555555444 433 4577888777654
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0005 Score=51.85 Aligned_cols=71 Identities=10% Similarity=-0.027 Sum_probs=52.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+... . .+.++..|.++.+.+.++- . ...|
T Consensus 10 ~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a~------i-~~ad 73 (234)
T 2aef_A 10 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKAN------V-RGAR 73 (234)
T ss_dssp CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHTT------C-TTCS
T ss_pred CEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhcC------c-chhc
Confidence 46899998 8999999999999999 999999987765443 1 3667888888876544320 1 2467
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.+|.+.+
T Consensus 74 ~vi~~~~ 80 (234)
T 2aef_A 74 AVIVDLE 80 (234)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 7776554
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00073 Score=53.43 Aligned_cols=72 Identities=18% Similarity=0.181 Sum_probs=49.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++|+||+|++|...++.+...|++|+.+++++++.+.+.+ + +.+..+-.-|.. . +++..++.+|+
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~vi~~~~~~---~-------~~~~~~~~~d~ 214 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS-L---GANRILSRDEFA---E-------SRPLEKQLWAG 214 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH-H---TCSEEEEGGGSS---C-------CCSSCCCCEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-c---CCCEEEecCCHH---H-------HHhhcCCCccE
Confidence 38999999999999999888999999999999888766543 3 333322212211 1 11112346899
Q ss_pred EEEcCC
Q 028868 82 LINNAA 87 (202)
Q Consensus 82 vi~~ag 87 (202)
++.++|
T Consensus 215 v~d~~g 220 (324)
T 3nx4_A 215 AIDTVG 220 (324)
T ss_dssp EEESSC
T ss_pred EEECCC
Confidence 999887
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0027 Score=51.43 Aligned_cols=80 Identities=19% Similarity=0.189 Sum_probs=54.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecC------------CCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL------------SSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv------------~~~~~i~~~~ 68 (202)
++++|+|+ |.+|..+++.+...|++|++.++++++++.+.+ .+.+ ++..|+ ++ +....-.
T Consensus 185 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lGa~--~~~l~~~~~~~~gya~~~~~-~~~~~~~ 256 (381)
T 3p2y_A 185 ASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VGAQ--WLDLGIDAAGEGGYARELSE-AERAQQQ 256 (381)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TTCE--ECCCC-------------CH-HHHHHHH
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCe--EEeccccccccccchhhhhH-HHHhhhH
Confidence 47899999 799999999999999999999999988776643 2332 222221 11 1122334
Q ss_pred HHHHHHhCCCccEEEEcCCCC
Q 028868 69 ETVTSIFQGKLNILINNAAIA 89 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag~~ 89 (202)
..+.+.. ...|++|.++...
T Consensus 257 ~~l~e~l-~~aDIVI~tv~iP 276 (381)
T 3p2y_A 257 QALEDAI-TKFDIVITTALVP 276 (381)
T ss_dssp HHHHHHH-TTCSEEEECCCCT
T ss_pred HHHHHHH-hcCCEEEECCCCC
Confidence 4444544 5789999987654
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0018 Score=52.36 Aligned_cols=77 Identities=12% Similarity=0.127 Sum_probs=52.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~~~ 78 (202)
++++|+|+ |++|...++.+...|+ +|+++++++++++.+. +.+.+.. .|..+ .++ +.+.+++..++.
T Consensus 195 ~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~----~lGa~~v---i~~~~~~~~---~~~~i~~~~~gg 263 (378)
T 3uko_A 195 SNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETAK----KFGVNEF---VNPKDHDKP---IQEVIVDLTDGG 263 (378)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHH----TTTCCEE---ECGGGCSSC---HHHHHHHHTTSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCcEE---EccccCchh---HHHHHHHhcCCC
Confidence 36899998 9999999888888899 8999999988876442 3344332 23221 112 233333433457
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 264 ~D~vid~~g~ 273 (378)
T 3uko_A 264 VDYSFECIGN 273 (378)
T ss_dssp BSEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0029 Score=51.79 Aligned_cols=39 Identities=21% Similarity=0.245 Sum_probs=35.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
++++|+|+ |.+|+.+++.+...|++|+++++++++++.+
T Consensus 173 ~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 173 AKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 47899997 8999999999999999999999998877665
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0042 Score=50.71 Aligned_cols=76 Identities=21% Similarity=0.316 Sum_probs=52.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
.+++|+|+ |++|...++.+...|+ +|+++++++++++.+. ++ |.+.. .|-.+.+ +.+++.+..++ .
T Consensus 215 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~----~~~~i~~~t~g~g 282 (404)
T 3ip1_A 215 DNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-EL---GADHV---IDPTKEN----FVEAVLDYTNGLG 282 (404)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HH---TCSEE---ECTTTSC----HHHHHHHHTTTCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hc---CCCEE---EcCCCCC----HHHHHHHHhCCCC
Confidence 47899998 8999999888888999 8999999987776543 33 33322 2433332 23334443333 6
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 283 ~D~vid~~g~ 292 (404)
T 3ip1_A 283 AKLFLEATGV 292 (404)
T ss_dssp CSEEEECSSC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.11 E-value=0.0016 Score=52.66 Aligned_cols=72 Identities=17% Similarity=0.246 Sum_probs=51.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|+|+ |++|...++.+...|++|+++++++++++.+.+ + +.+.. .|..+.+.++ ++ . +.+|
T Consensus 196 ~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-l---Ga~~v---i~~~~~~~~~----~~---~-~g~D 259 (369)
T 1uuf_A 196 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-L---GADEV---VNSRNADEMA----AH---L-KSFD 259 (369)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-H---TCSEE---EETTCHHHHH----TT---T-TCEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-c---CCcEE---eccccHHHHH----Hh---h-cCCC
Confidence 37899998 899999998888899999999999888766543 3 33222 3555543222 21 1 4699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|.++|.
T Consensus 260 vvid~~g~ 267 (369)
T 1uuf_A 260 FILNTVAA 267 (369)
T ss_dssp EEEECCSS
T ss_pred EEEECCCC
Confidence 99999985
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0011 Score=53.64 Aligned_cols=77 Identities=17% Similarity=0.140 Sum_probs=51.5
Q ss_pred EEEEec-CCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTG-GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItG-as~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|.| |+|++|...++.+...|++|+.+++++++++.+.+ .+.+.. .|-.+.+-.+++. ++... ..+|
T Consensus 173 ~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~~---~~~~~~~~~~~v~-~~t~~--~g~d 242 (379)
T 3iup_A 173 SALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLKA----QGAVHV---CNAASPTFMQDLT-EALVS--TGAT 242 (379)
T ss_dssp SCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHHH----TTCSCE---EETTSTTHHHHHH-HHHHH--HCCC
T ss_pred EEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHh----CCCcEE---EeCCChHHHHHHH-HHhcC--CCce
Confidence 578886 89999999998888899999999999887765542 343322 2333332222222 22211 2699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++.++|.
T Consensus 243 ~v~d~~g~ 250 (379)
T 3iup_A 243 IAFDATGG 250 (379)
T ss_dssp EEEESCEE
T ss_pred EEEECCCc
Confidence 99999995
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.014 Score=45.75 Aligned_cols=114 Identities=12% Similarity=0.039 Sum_probs=66.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|| |.+|..++..|+..|. +|++.++++++++.....+.+.. .+..+. .+ +. +.+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~~--~~-----------~a~ 65 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-HG--GH-----------SEL 65 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-EE--CG-----------GGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-EC--CH-----------HHh
Confidence 57899998 9999999999999998 99999999887766555554321 111111 11 11 112
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
..-|+||.++|...... .+ -.+.+..|+.-...+.+.+.++ ...+.++++|...
T Consensus 66 -~~aDvVIi~~~~~~~~g---~~---r~dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~tNP~ 119 (304)
T 2v6b_A 66 -ADAQVVILTAGANQKPG---ES---RLDLLEKNADIFRELVPQITRA---APDAVLLVTSNPV 119 (304)
T ss_dssp -TTCSEEEECC------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECSSSH
T ss_pred -CCCCEEEEcCCCCCCCC---Cc---HHHHHHhHHHHHHHHHHHHHHh---CCCeEEEEecCch
Confidence 46799999998643211 11 1234556666555555555443 2345666666554
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.027 Score=44.48 Aligned_cols=118 Identities=17% Similarity=0.088 Sum_probs=73.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-C--CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARF-G--AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
+++.|+||+|.+|.+++..|..+ + ..+++++.++ +.+....++.+....+......-++ ..+.+ .
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~----------~~~~~-~ 68 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGED----------ATPAL-E 68 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSC----------CHHHH-T
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCC----------cHHHh-C
Confidence 57899999999999999999876 5 4899999987 4555555665543322222110011 01112 4
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
..|++|.++|.... | .++. .+.++.|..-...+.+.+.++ ...+.++++|...
T Consensus 69 ~aDivii~ag~~rk-p--G~~R---~dll~~N~~I~~~i~~~i~~~---~p~a~vlvvtNPv 121 (312)
T 3hhp_A 69 GADVVLISAGVARK-P--GMDR---SDLFNVNAGIVKNLVQQVAKT---CPKACIGIITNPV 121 (312)
T ss_dssp TCSEEEECCSCSCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTSEEEECSSCH
T ss_pred CCCEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHH---CCCcEEEEecCcc
Confidence 68999999997532 2 2333 456677776666665555332 3456788877754
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.019 Score=45.37 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=71.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++.|+|+ |.+|.+++..|+..|. .|++.++++++++....++.+. ..+......|.. +.
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~~-------------~a 66 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTNDY-------------GP 66 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESSS-------------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCCH-------------HH
Confidence 57899997 9999999999999886 8999999998877655555432 122222212211 12
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG 140 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 140 (202)
+ ..-|++|.++|...... .+ =.+.++.|..-...+.+.+ .+. +.+.++++|....
T Consensus 67 ~-~~aDvVii~ag~~~kpG---~~---R~dl~~~N~~i~~~i~~~i----~~~~p~a~vivvtNPvd 122 (314)
T 3nep_X 67 T-EDSDVCIITAGLPRSPG---MS---RDDLLAKNTEIVGGVTEQF----VEGSPDSTIIVVANPLD 122 (314)
T ss_dssp G-TTCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHH----HTTCTTCEEEECCSSHH
T ss_pred h-CCCCEEEECCCCCCCCC---CC---HHHHHHhhHHHHHHHHHHH----HHhCCCcEEEecCCchh
Confidence 2 46899999999753211 11 2345566665444444444 433 4577888877653
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0014 Score=52.74 Aligned_cols=73 Identities=18% Similarity=0.245 Sum_probs=51.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |++|...++.+...|++|+++++++++++.+.++ .+.+.. .|..+.+.+ .+.. +.+|
T Consensus 182 ~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~---lGa~~v---i~~~~~~~~-------~~~~-~g~D 246 (357)
T 2cf5_A 182 LRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQD---LGADDY---VIGSDQAKM-------SELA-DSLD 246 (357)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTT---SCCSCE---EETTCHHHH-------HHST-TTEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHH---cCCcee---eccccHHHH-------HHhc-CCCC
Confidence 47899996 9999999988888899999999998777655423 333321 244443322 2222 4699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|.++|.
T Consensus 247 ~vid~~g~ 254 (357)
T 2cf5_A 247 YVIDTVPV 254 (357)
T ss_dssp EEEECCCS
T ss_pred EEEECCCC
Confidence 99999985
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0044 Score=49.98 Aligned_cols=77 Identities=16% Similarity=0.172 Sum_probs=51.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS-REQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~-~~~i~~~~~~~~~~~~~~ 78 (202)
++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. + .+.+.. .|..+ .+++ .+.+.+..++.
T Consensus 193 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v---i~~~~~~~~~---~~~i~~~t~gg 261 (373)
T 1p0f_A 193 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-E---LGATEC---LNPKDYDKPI---YEVICEKTNGG 261 (373)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-H---TTCSEE---ECGGGCSSCH---HHHHHHHTTSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-H---cCCcEE---EecccccchH---HHHHHHHhCCC
Confidence 47899996 8999999888878899 8999999988876553 2 343322 23221 0122 22333333347
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 262 ~Dvvid~~g~ 271 (373)
T 1p0f_A 262 VDYAVECAGR 271 (373)
T ss_dssp BSEEEECSCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0053 Score=49.46 Aligned_cols=76 Identities=13% Similarity=0.225 Sum_probs=50.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. ++ +.+.. .|-.+.+ +.+++.+..++.+
T Consensus 192 ~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~-~l---Ga~~v---i~~~~~~----~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 192 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL---GATHV---INSKTQD----PVAAIKEITDGGV 259 (371)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH---TCSEE---EETTTSC----HHHHHHHHTTSCE
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-Hc---CCCEE---ecCCccC----HHHHHHHhcCCCC
Confidence 47899996 8999999888878899 6999999988776553 33 33222 2333322 2233333333479
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.++|.
T Consensus 260 D~vid~~g~ 268 (371)
T 1f8f_A 260 NFALESTGS 268 (371)
T ss_dssp EEEEECSCC
T ss_pred cEEEECCCC
Confidence 999999983
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0059 Score=48.72 Aligned_cols=85 Identities=13% Similarity=0.186 Sum_probs=52.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhc--CCeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNK--GFKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~--~~~v~~~~~Dv 58 (202)
++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+.+.+.+.+. ..++..+..++
T Consensus 35 ~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~~~~i 113 (340)
T 3rui_A 35 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 113 (340)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEEeccc
Confidence 47899998 7999999999999998 788888753 3555555555544 34555555444
Q ss_pred -------CCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 59 -------SSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 59 -------~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
+++.....-.+.+.+.+ ...|+||.+..
T Consensus 114 ~~~g~~~~~~~~~~~~~~~l~~~l-~~~DlVvd~tD 148 (340)
T 3rui_A 114 PMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVD 148 (340)
T ss_dssp CCTTSCCSCHHHHHHHHHHHHHHH-HHCSEEEECCS
T ss_pred cccCcccchhhhhcCCHHHHHhhh-ccCCEEEecCC
Confidence 22211111111222222 34688888766
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.028 Score=44.69 Aligned_cols=115 Identities=10% Similarity=-0.024 Sum_probs=73.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc---CCeEEEE-EecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---GFKVTGS-VCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~---~~~v~~~-~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+|+ |.+|..++..++..|. .|++.+.++++++....++.+. ....... ..|..+
T Consensus 22 ~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------------- 86 (330)
T 3ldh_A 22 NKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------------- 86 (330)
T ss_dssp CEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS--------------
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH--------------
Confidence 46889999 9999999999999997 8999999998887776666542 1111111 223221
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
+ ..-|++|.++|...... .+. .+.+..|..-.-.+.+.+.++ ...+.++++|....
T Consensus 87 ~-~daDiVIitaG~p~kpG---~tR---~dll~~N~~I~k~i~~~I~k~---~P~a~ilvvtNPvd 142 (330)
T 3ldh_A 87 S-AGSKLVVITAGARQQEG---ESR---LNLVQRNVNIFKFIIPNIVKH---SPDCLKELHPELGT 142 (330)
T ss_dssp C-SSCSEEEECCSCCCCSS---CCT---TGGGHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHH
T ss_pred h-CCCCEEEEeCCCCCCCC---CCH---HHHHHhhHHHHHHHHHHHHhh---CCCceEEeCCCccH
Confidence 2 46899999999753222 121 134445555444444444332 34677888887654
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00072 Score=54.40 Aligned_cols=73 Identities=15% Similarity=0.100 Sum_probs=50.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |++|...++.+...|++|+.+++++++++.+.+ + +.+.. .|..+.++ ..+.+. +.+|
T Consensus 181 ~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-l---Ga~~v---~~~~~~~~---~~~~~~----~~~D 245 (360)
T 1piw_A 181 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-M---GADHY---IATLEEGD---WGEKYF----DTFD 245 (360)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-H---TCSEE---EEGGGTSC---HHHHSC----SCEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-c---CCCEE---EcCcCchH---HHHHhh----cCCC
Confidence 47999999 999999998888899999999999888765543 3 33222 23322201 122221 4699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|.++|.
T Consensus 246 ~vid~~g~ 253 (360)
T 1piw_A 246 LIVVCASS 253 (360)
T ss_dssp EEEECCSC
T ss_pred EEEECCCC
Confidence 99999985
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.015 Score=46.19 Aligned_cols=117 Identities=9% Similarity=0.030 Sum_probs=71.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|| |.+|.+++..|+..|. +|++.++++++++....++.+. +....+...+ |. +.+
T Consensus 8 ~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~--d~-----------~a~ 73 (324)
T 3gvi_A 8 NKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAN--DY-----------AAI 73 (324)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEES--SG-----------GGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeC--CH-----------HHH
Confidence 46889998 9999999999999998 9999999998876554444432 1112221111 10 112
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
..-|++|.++|...... .+. .+.+..|..-...+.+.+..+ ...+.++++|.....
T Consensus 74 -~~aDiVIiaag~p~k~G---~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~iivvtNPvd~ 129 (324)
T 3gvi_A 74 -EGADVVIVTAGVPRKPG---MSR---DDLLGINLKVMEQVGAGIKKY---APEAFVICITNPLDA 129 (324)
T ss_dssp -TTCSEEEECCSCCCC-----------CHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHHH
T ss_pred -CCCCEEEEccCcCCCCC---CCH---HHHHHhhHHHHHHHHHHHHHH---CCCeEEEecCCCcHH
Confidence 46799999999743211 121 234556665555554444322 245778888776543
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.018 Score=45.36 Aligned_cols=113 Identities=11% Similarity=0.033 Sum_probs=66.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCeEEEEE-ecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSV-CDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~-~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+|| |.+|..++..|+..|. .|++.+.++++++....++.+. ........ .|. +.
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--------------~a 67 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY--------------AD 67 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG--------------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH--------------HH
Confidence 47899999 9999999999999996 8999999988877655555432 11221111 221 11
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
+ ...|++|.++|...... .+. .+.+..|..-...+.+.+ .+. ..+.++++|...
T Consensus 68 ~-~~aD~Vi~a~g~p~~~g---~~r---~dl~~~n~~i~~~i~~~i----~~~~p~a~vi~~tNPv 122 (309)
T 1ur5_A 68 T-ANSDVIVVTSGAPRKPG---MSR---EDLIKVNADITRACISQA----APLSPNAVIIMVNNPL 122 (309)
T ss_dssp G-TTCSEEEECCCC--------------CHHHHHHHHHHHHHHHHH----GGGCTTCEEEECCSSH
T ss_pred H-CCCCEEEEcCCCCCCCC---CCH---HHHHHHHHHHHHHHHHHH----HhhCCCeEEEEcCCch
Confidence 2 46899999999753211 111 123445555444444444 433 344555555543
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0076 Score=46.03 Aligned_cols=77 Identities=13% Similarity=0.211 Sum_probs=51.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhc--CCeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNK--GFKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~--~~~v~~~~~Dv 58 (202)
++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+.+.+.+.+. ..++..+..++
T Consensus 29 ~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 107 (251)
T 1zud_1 29 SQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL 107 (251)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence 47899998 6899999999999998 788886642 4555566666543 34555655555
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 59 SSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 59 ~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
+. +++.++++ ..|+||.+..
T Consensus 108 ~~-~~~~~~~~--------~~DvVi~~~d 127 (251)
T 1zud_1 108 TG-EALKDAVA--------RADVVLDCTD 127 (251)
T ss_dssp CH-HHHHHHHH--------HCSEEEECCS
T ss_pred CH-HHHHHHHh--------cCCEEEECCC
Confidence 43 33333332 3588888654
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0014 Score=52.33 Aligned_cols=67 Identities=24% Similarity=0.290 Sum_probs=49.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+|+ |++|...++.+...|++|+++++++++.+.+. +.+.+..+ ++.+.+. ..+|
T Consensus 178 ~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v~-----~~~~~~~-----------~~~D 236 (348)
T 3two_A 178 TKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL----SMGVKHFY-----TDPKQCK-----------EELD 236 (348)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH----HTTCSEEE-----SSGGGCC-----------SCEE
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH----hcCCCeec-----CCHHHHh-----------cCCC
Confidence 47899997 89999999888889999999999988876543 23443333 2322211 2689
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++.++|.
T Consensus 237 ~vid~~g~ 244 (348)
T 3two_A 237 FIISTIPT 244 (348)
T ss_dssp EEEECCCS
T ss_pred EEEECCCc
Confidence 99999985
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0032 Score=48.86 Aligned_cols=82 Identities=12% Similarity=0.016 Sum_probs=53.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-------h--cCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-------N--KGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-------~--~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
+++.|.|++|.+|.++++.|.+.|++|++.+|++++.+.+.+ .. + ...++.++.+ ....+.++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~-~g~~~~~~~~~~~~aDvVi~av---~~~~~~~v~~~l 87 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG-MGIPLTDGDGWIDEADVVVLAL---PDNIIEKVAEDI 87 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH-TTCCCCCSSGGGGTCSEEEECS---CHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh-cCCCcCCHHHHhcCCCEEEEcC---CchHHHHHHHHH
Confidence 478999999999999999999999999999999887766543 10 0 0123333222 234467777777
Q ss_pred HHHhCCCccEEEEcCC
Q 028868 72 TSIFQGKLNILINNAA 87 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag 87 (202)
.... .+=.+++++..
T Consensus 88 ~~~l-~~~~ivv~~s~ 102 (286)
T 3c24_A 88 VPRV-RPGTIVLILDA 102 (286)
T ss_dssp GGGS-CTTCEEEESCS
T ss_pred HHhC-CCCCEEEECCC
Confidence 6544 22235555443
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.025 Score=44.69 Aligned_cols=116 Identities=16% Similarity=0.086 Sum_probs=71.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC--hhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN--QIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~--~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
+++.|+|+ |.+|.++|..++..|. +|++.+++ +++.+....++.+. .........+ +. +
T Consensus 9 ~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~-----------~ 74 (315)
T 3tl2_A 9 KKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY-----------A 74 (315)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG-----------G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH-----------H
Confidence 46889997 9999999999999999 99999999 55555444444321 1111111111 11 1
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
.+ ..-|++|.++|.... | ..+. .+.++.|..-.-.+.+.+.++ ...+.++++|....
T Consensus 75 a~-~~aDvVIiaag~p~k-p--g~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvsNPvd 131 (315)
T 3tl2_A 75 DT-ADSDVVVITAGIARK-P--GMSR---DDLVATNSKIMKSITRDIAKH---SPNAIIVVLTNPVD 131 (315)
T ss_dssp GG-TTCSEEEECCSCCCC-T--TCCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred Hh-CCCCEEEEeCCCCCC-C--CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCeEEEECCChHH
Confidence 23 468999999997532 2 1333 345667766555555554332 34567888876543
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0026 Score=51.05 Aligned_cols=80 Identities=14% Similarity=0.193 Sum_probs=47.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC--CC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ--GK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~--~~ 78 (202)
+++||+||+|++|...++.+...|++|+++.++.++..+..+.+++.|.+..+ | .++. ..+.+.+..+ +.
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~---~~~~--~~~~~~~~~~~~~~ 240 (357)
T 1zsy_A 169 DSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---T---EEEL--RRPEMKNFFKDMPQ 240 (357)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---E---HHHH--HSGGGGGTTSSSCC
T ss_pred CEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---e---cCcc--hHHHHHHHHhCCCC
Confidence 47999999999999988877778999888776543322222233344543222 2 1110 0112222221 24
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 241 ~Dvvid~~g~ 250 (357)
T 1zsy_A 241 PRLALNCVGG 250 (357)
T ss_dssp CSEEEESSCH
T ss_pred ceEEEECCCc
Confidence 8999999883
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0032 Score=51.26 Aligned_cols=77 Identities=21% Similarity=0.309 Sum_probs=52.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
++++|+|+ |++|...++.+...|+ +|+++++++++++.+. +.|.+ . .|.++.+.+. +++++..++ .
T Consensus 187 ~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~----~lGa~--~--i~~~~~~~~~---~~v~~~t~g~g 254 (398)
T 1kol_A 187 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFE--I--ADLSLDTPLH---EQIAALLGEPE 254 (398)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCE--E--EETTSSSCHH---HHHHHHHSSSC
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHH----HcCCc--E--EccCCcchHH---HHHHHHhCCCC
Confidence 47899995 9999998888778899 7999999988776553 23443 2 3444333222 233333323 6
Q ss_pred ccEEEEcCCCC
Q 028868 79 LNILINNAAIA 89 (202)
Q Consensus 79 id~vi~~ag~~ 89 (202)
+|++|.++|..
T Consensus 255 ~Dvvid~~G~~ 265 (398)
T 1kol_A 255 VDCAVDAVGFE 265 (398)
T ss_dssp EEEEEECCCTT
T ss_pred CCEEEECCCCc
Confidence 99999999953
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.004 Score=48.34 Aligned_cols=85 Identities=13% Similarity=0.017 Sum_probs=57.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH-------HHhcCCeEEEEEecCCCHHHHHHHH---HH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLI---ET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dv~~~~~i~~~~---~~ 70 (202)
|++.|.|+ |.+|.++++.|++.|++|++.+|++++.+.+.+. +.+.-.+..++..-+.+...+++.+ +.
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 80 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG 80 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence 57888887 8999999999999999999999998877665431 0000001233344455566777777 66
Q ss_pred HHHHhCCCccEEEEcCC
Q 028868 71 VTSIFQGKLNILINNAA 87 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag 87 (202)
+.... .+=.++|+..+
T Consensus 81 l~~~l-~~~~~vi~~st 96 (287)
T 3pef_A 81 VLEGI-GEGRGYVDMST 96 (287)
T ss_dssp HHHHC-CTTCEEEECSC
T ss_pred HhhcC-CCCCEEEeCCC
Confidence 66554 33356677654
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0022 Score=52.71 Aligned_cols=56 Identities=11% Similarity=0.033 Sum_probs=43.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i 64 (202)
.++|.|. |-+|..+++.|.+.|+.|++++++++..+.+.+ . .+.++..|.++++.+
T Consensus 6 ~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~--g~~vi~GDat~~~~L 61 (413)
T 3l9w_A 6 RVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----F--GMKVFYGDATRMDLL 61 (413)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----T--TCCCEESCTTCHHHH
T ss_pred eEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----C--CCeEEEcCCCCHHHH
Confidence 4889997 789999999999999999999999987765542 2 244555677765544
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=96.87 E-value=0.036 Score=43.61 Aligned_cols=116 Identities=15% Similarity=0.042 Sum_probs=75.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|| |.+|.+++..|+..+ .+|++.+.++++++....++.+.. .++.+.. | +.+ .+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~-----------a~ 65 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG-----------DL 65 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH-----------Hh
Confidence 57899998 999999999999887 489999999988887666665421 1222221 2 111 12
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
..-|+||..+|..... ..+.+ +.+..|..-...+.+.+.++ ...+.++++|...+.
T Consensus 66 -~~aD~Vii~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~ 121 (310)
T 2xxj_A 66 -EGARAVVLAAGVAQRP---GETRL---QLLDRNAQVFAQVVPRVLEA---APEAVLLVATNPVDV 121 (310)
T ss_dssp -TTEEEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECSSSHHH
T ss_pred -CCCCEEEECCCCCCCC---CcCHH---HHHHhhHHHHHHHHHHHHHH---CCCcEEEEecCchHH
Confidence 4689999999975322 22333 34566666555555444332 346788887776543
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.043 Score=43.43 Aligned_cols=117 Identities=9% Similarity=0.025 Sum_probs=73.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|+ |.+|.+++..|+..|. +|++.++++++++....++.+. +....+...+ +. +.+
T Consensus 6 ~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~-----------~a~ 71 (321)
T 3p7m_A 6 KKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY-----------KDL 71 (321)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG-----------GGG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH-----------HHH
Confidence 46889995 9999999999999888 9999999998877666666542 1122222111 11 112
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
..-|++|.++|...... .+. .+.+..|..-...+.+.+.++ ...+.++++|.....
T Consensus 72 -~~aDvVIi~ag~p~k~G---~~R---~dl~~~N~~i~~~i~~~i~~~---~p~a~vivvtNPvd~ 127 (321)
T 3p7m_A 72 -ENSDVVIVTAGVPRKPG---MSR---DDLLGINIKVMQTVGEGIKHN---CPNAFVICITNPLDI 127 (321)
T ss_dssp -TTCSEEEECCSCCCCTT---CCH---HHHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHHH
T ss_pred -CCCCEEEEcCCcCCCCC---CCH---HHHHHHhHHHHHHHHHHHHHH---CCCcEEEEecCchHH
Confidence 45799999999753221 233 234566766555555554332 245677877766543
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0055 Score=50.07 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=35.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
.+++|+|+ |.+|..+++.+...|++|++.++++++++.+.
T Consensus 191 ~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~ 230 (405)
T 4dio_A 191 AKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA 230 (405)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 36899999 79999999999999999999999988776654
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0072 Score=49.21 Aligned_cols=77 Identities=16% Similarity=0.260 Sum_probs=51.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. +.+.+ . .|..+.+.+ .+.+.+..++ .
T Consensus 187 ~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~----~lGa~--~--i~~~~~~~~---~~~~~~~~~g~g 254 (398)
T 2dph_A 187 SHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS----DAGFE--T--IDLRNSAPL---RDQIDQILGKPE 254 (398)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----TTTCE--E--EETTSSSCH---HHHHHHHHSSSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCc--E--EcCCCcchH---HHHHHHHhCCCC
Confidence 47899997 9999998888777899 9999999987775543 33443 2 344432221 1222222223 6
Q ss_pred ccEEEEcCCCC
Q 028868 79 LNILINNAAIA 89 (202)
Q Consensus 79 id~vi~~ag~~ 89 (202)
+|++|.++|..
T Consensus 255 ~Dvvid~~g~~ 265 (398)
T 2dph_A 255 VDCGVDAVGFE 265 (398)
T ss_dssp EEEEEECSCTT
T ss_pred CCEEEECCCCc
Confidence 99999999853
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0024 Score=50.91 Aligned_cols=43 Identities=12% Similarity=-0.116 Sum_probs=36.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~ 44 (202)
+++.|+|| |.+|.++|..|+..|. .|++.++++++++.....+
T Consensus 10 ~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l 53 (331)
T 1pzg_A 10 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDL 53 (331)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHH
Confidence 36899998 9999999999999998 9999999998777644443
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0018 Score=51.19 Aligned_cols=72 Identities=18% Similarity=0.213 Sum_probs=48.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|++|...++.+...|++|+.++++ ++. +...++ +.+. + .|-.+.+.+. +.. ..+|
T Consensus 154 ~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~~-~~~~~l---Ga~~-~--i~~~~~~~~~-------~~~-~g~D 217 (321)
T 3tqh_A 154 DVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RNH-AFLKAL---GAEQ-C--INYHEEDFLL-------AIS-TPVD 217 (321)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HHH-HHHHHH---TCSE-E--EETTTSCHHH-------HCC-SCEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-chH-HHHHHc---CCCE-E--EeCCCcchhh-------hhc-cCCC
Confidence 479999999999999999999999999988854 333 333333 4332 2 2444332111 112 4689
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++.++|.
T Consensus 218 ~v~d~~g~ 225 (321)
T 3tqh_A 218 AVIDLVGG 225 (321)
T ss_dssp EEEESSCH
T ss_pred EEEECCCc
Confidence 99999883
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0025 Score=49.67 Aligned_cols=41 Identities=20% Similarity=0.131 Sum_probs=36.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLH 42 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~ 42 (202)
|+++|+|+ ||.|++++..|.+.|+ +|.++.|+.++.+.+.+
T Consensus 123 k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~ 164 (282)
T 3fbt_A 123 NICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG 164 (282)
T ss_dssp SEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred CEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence 57999998 6999999999999998 99999999887766544
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.04 Score=43.08 Aligned_cols=115 Identities=8% Similarity=-0.038 Sum_probs=73.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++-|+|| |++|.++|..|+.++. ++++.+.++++.+....++.+. +........+ |.+ .
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~-----------~ 66 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYS-----------L 66 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGG-----------G
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHH-----------H
Confidence 57889996 9999999999998875 8999999988777766666542 2223333222 111 1
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGG 140 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~ 140 (202)
+ ..-|++|..||..... .++.+ +.++.|..=. +.+.+.+.+. ..+.++.+|....
T Consensus 67 ~-~~aDvVvitAG~prkp---GmtR~---dLl~~Na~I~----~~i~~~i~~~~p~aivlvvsNPvd 122 (294)
T 2x0j_A 67 L-KGSEIIVVTAGLARKP---GMTRL---DLAHKNAGII----KDIAKKIVENAPESKILVVTNPMD 122 (294)
T ss_dssp G-TTCSEEEECCCCCCCS---SSCHH---HHHHHHHHHH----HHHHHHHHTTSTTCEEEECSSSHH
T ss_pred h-CCCCEEEEecCCCCCC---CCchH---HHHHHHHHHH----HHHHHHHHhcCCceEEEEecCcch
Confidence 2 3579999999975432 23443 4566776633 4444444443 4567777777653
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0039 Score=49.85 Aligned_cols=76 Identities=17% Similarity=0.237 Sum_probs=50.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
++++|+|+ |++|...++.+...|+ +|+.+++++++++.+. ++ +.+.. .|-.+.+ +.+++.+..++ .
T Consensus 168 ~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~l---Ga~~v---i~~~~~~----~~~~v~~~t~g~g 235 (352)
T 3fpc_A 168 DTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EY---GATDI---INYKNGD----IVEQILKATDGKG 235 (352)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HH---TCCEE---ECGGGSC----HHHHHHHHTTTCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-Hh---CCceE---EcCCCcC----HHHHHHHHcCCCC
Confidence 36899996 8999998888888899 8999999987765443 33 33322 2322222 33344444333 6
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|+++.++|.
T Consensus 236 ~D~v~d~~g~ 245 (352)
T 3fpc_A 236 VDKVVIAGGD 245 (352)
T ss_dssp EEEEEECSSC
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.036 Score=43.95 Aligned_cols=116 Identities=9% Similarity=-0.003 Sum_probs=73.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|| |.+|.+++..|+..+. .|++.+.++++++....++.+.. .++.+. .| + .+.+
T Consensus 10 ~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~-----------~~a~ 74 (326)
T 2zqz_A 10 QKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--E-----------YSDA 74 (326)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--C-----------GGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--C-----------HHHh
Confidence 46899999 9999999999998875 89999999988877666665431 222222 12 1 1112
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
..-|+||..+|..... ..+.+ +.+..|+.-...+.+.+..+ ...+.++++|...+.
T Consensus 75 -~~aDvVii~ag~~~k~---g~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~ 130 (326)
T 2zqz_A 75 -KDADLVVITAGAPQKP---GETRL---DLVNKNLKILKSIVDPIVDS---GFNGIFLVAANPVDI 130 (326)
T ss_dssp -GGCSEEEECCCCC--------CHH---HHHHHHHHHHHHHHHHHHHH---TCCSEEEECSSSHHH
T ss_pred -CCCCEEEEcCCCCCCC---CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCcHHH
Confidence 3679999999975321 12322 34566666555555444332 346788888776543
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0071 Score=48.16 Aligned_cols=100 Identities=17% Similarity=0.226 Sum_probs=63.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
++++|+|+ |++|...++.+... |.+|+.+++++++++.+. +.+.+..+ |-.+ +. .+++.+..++ .
T Consensus 173 ~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~----~lGa~~~i---~~~~-~~----~~~v~~~t~g~g 239 (345)
T 3jv7_A 173 STAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR----EVGADAAV---KSGA-GA----ADAIRELTGGQG 239 (345)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH----HTTCSEEE---ECST-TH----HHHHHHHHGGGC
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH----HcCCCEEE---cCCC-cH----HHHHHHHhCCCC
Confidence 47899998 99999887777666 679999999988776543 23443322 2222 22 2333333223 6
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
+|+++.++|.. ..++.+++.+++ .|+++.++...+
T Consensus 240 ~d~v~d~~G~~-------------------------~~~~~~~~~l~~--~G~iv~~G~~~~ 274 (345)
T 3jv7_A 240 ATAVFDFVGAQ-------------------------STIDTAQQVVAV--DGHISVVGIHAG 274 (345)
T ss_dssp EEEEEESSCCH-------------------------HHHHHHHHHEEE--EEEEEECSCCTT
T ss_pred CeEEEECCCCH-------------------------HHHHHHHHHHhc--CCEEEEECCCCC
Confidence 99999999841 123344455554 589998876544
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.047 Score=43.07 Aligned_cols=114 Identities=11% Similarity=0.038 Sum_probs=71.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
++.|+|| |.+|.+++..|+..|. .|++.+.++++++.....+.+. +.++.+. .| + .+.+
T Consensus 8 KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~-----------~~a~ 72 (317)
T 3d0o_A 8 KVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E-----------YSDC 72 (317)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C-----------GGGG
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C-----------HHHh
Confidence 6899999 9999999999998884 8999999988776654444331 1222222 22 1 1112
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
..-|++|..+|..... ..+.+ +.+..|..-...+.+.+.++ ...+.++++|...+
T Consensus 73 -~~aDvVvi~ag~~~~~---g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv~ 127 (317)
T 3d0o_A 73 -HDADLVVICAGAAQKP---GETRL---DLVSKNLKIFKSIVGEVMAS---KFDGIFLVATNPVD 127 (317)
T ss_dssp -TTCSEEEECCCCCCCT---TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHH
T ss_pred -CCCCEEEECCCCCCCC---CCcHH---HHHHHHHHHHHHHHHHHHHh---CCCcEEEEecCcHH
Confidence 4689999999975322 12322 34566666555555544333 24567777666543
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.76 E-value=0.012 Score=50.35 Aligned_cols=85 Identities=13% Similarity=0.186 Sum_probs=54.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhc--CCeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNK--GFKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~--~~~v~~~~~Dv 58 (202)
++|+|.|+ ||+|.++++.|+..|. ++.++|.+. .+.+.+.+.+.+. ..++..+..++
T Consensus 327 arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~~~~I 405 (615)
T 4gsl_A 327 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 405 (615)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEeeccc
Confidence 46899999 6999999999999998 888988753 3555566666544 34555655544
Q ss_pred -------CCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 59 -------SSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 59 -------~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
++++...--.+.+.+.+ ...|+||.+..
T Consensus 406 pm~gh~v~~e~~~~l~~~~l~~ll-~~~DlVvd~tD 440 (615)
T 4gsl_A 406 PMIGHKLVNEEAQHKDFDRLRALI-KEHDIIFLLVD 440 (615)
T ss_dssp CCTTCCCSCHHHHHHHHHHHHHHH-HHCSEEEECCS
T ss_pred cccCccccchhhhcCCHHHHHHHh-hcCCEEEecCC
Confidence 23211111112222223 35799998766
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0015 Score=51.83 Aligned_cols=74 Identities=20% Similarity=0.214 Sum_probs=49.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++|+||+|++|...++.+...|++|+++++++++++.+. ++ +.+.. + |..+.+ . +.+.+..++.+|+
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~l---Ga~~v-~--~~~~~~--~---~~~~~~~~~~~d~ 220 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QL---GASEV-I--SREDVY--D---GTLKALSKQQWQG 220 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HH---TCSEE-E--EHHHHC--S---SCCCSSCCCCEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hc---CCcEE-E--ECCCch--H---HHHHHhhcCCccE
Confidence 6999999999999999988889999999999987776543 33 33222 1 211110 0 0111111246999
Q ss_pred EEEcCC
Q 028868 82 LINNAA 87 (202)
Q Consensus 82 vi~~ag 87 (202)
+|.++|
T Consensus 221 vid~~g 226 (330)
T 1tt7_A 221 AVDPVG 226 (330)
T ss_dssp EEESCC
T ss_pred EEECCc
Confidence 999998
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.74 E-value=0.034 Score=43.99 Aligned_cols=116 Identities=7% Similarity=0.007 Sum_probs=70.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|| |.+|.+++..|+..+. +|++.+.++++++....++.+.. .++.+. .| + .+.+
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~-----------~~a~ 70 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E-----------YSDC 70 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C-----------GGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C-----------HHHh
Confidence 36899999 9999999999998886 89999999988887666665431 222222 12 1 1113
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV 141 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~ 141 (202)
..-|+||..+|...... .+ -.+.+..|..-...+.+.+.++ ...+.++++|...+.
T Consensus 71 -~~aDvVii~ag~~~~~g---~~---R~dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~~ 126 (318)
T 1ez4_A 71 -KDADLVVITAGAPQKPG---ES---RLDLVNKNLNILSSIVKPVVDS---GFDGIFLVAANPVDI 126 (318)
T ss_dssp -TTCSEEEECCCC----------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECSSSHHH
T ss_pred -CCCCEEEECCCCCCCCC---CC---HHHHHHHHHHHHHHHHHHHHHh---CCCeEEEEeCCcHHH
Confidence 46899999999753211 11 1234455555444444443222 346788887776543
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0054 Score=47.94 Aligned_cols=84 Identities=6% Similarity=-0.014 Sum_probs=57.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH-------HHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
++.|.|. |.+|..+|+.|++.|++|++.+|++++.+.+.+. +.+.-. ..++..-+.+...+++.++.+...
T Consensus 17 ~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~~ 94 (296)
T 3qha_A 17 KLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAGH 94 (296)
T ss_dssp CEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHTT
T ss_pred eEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHHh
Confidence 5778885 8999999999999999999999998876655431 111111 334445566667777777777665
Q ss_pred hCCCccEEEEcCCC
Q 028868 75 FQGKLNILINNAAI 88 (202)
Q Consensus 75 ~~~~id~vi~~ag~ 88 (202)
. .+=.++|+....
T Consensus 95 l-~~g~ivv~~st~ 107 (296)
T 3qha_A 95 A-KPGTVIAIHSTI 107 (296)
T ss_dssp C-CTTCEEEECSCC
T ss_pred c-CCCCEEEEeCCC
Confidence 4 344667776553
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.013 Score=45.51 Aligned_cols=83 Identities=17% Similarity=0.092 Sum_probs=58.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---EEEEEeCChhHHHHHHHHHH--------h--cCCeEEEEEecCCCHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRNQIELDARLHEWK--------N--KGFKVTGSVCDLSSREQREKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~---~Vi~~~r~~~~~~~~~~~~~--------~--~~~~v~~~~~Dv~~~~~i~~~ 67 (202)
+++.|+|+ |.+|.++++.|.+.|+ +|++.+|++++++.+.+.+. + ...++.++.+ .+..+.++
T Consensus 4 ~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~~v 79 (280)
T 3tri_A 4 SNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIKMV 79 (280)
T ss_dssp SCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHHHH
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHHHH
Confidence 35778888 8999999999999998 89999999988877665321 0 1334555544 35677888
Q ss_pred HHHHHHH-hCCCccEEEEcCCC
Q 028868 68 IETVTSI-FQGKLNILINNAAI 88 (202)
Q Consensus 68 ~~~~~~~-~~~~id~vi~~ag~ 88 (202)
++++... +. +=.++|.+++.
T Consensus 80 l~~l~~~~l~-~~~iiiS~~ag 100 (280)
T 3tri_A 80 CEELKDILSE-TKILVISLAVG 100 (280)
T ss_dssp HHHHHHHHHT-TTCEEEECCTT
T ss_pred HHHHHhhccC-CCeEEEEecCC
Confidence 8888776 52 22367776553
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.068 Score=42.72 Aligned_cols=115 Identities=17% Similarity=0.096 Sum_probs=68.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCChh--HHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQI--ELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~~~--~~~~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
+|.|+||+|+||.+++..|+.... .+.+.+.++. .++....++.+-. ........+ +. .
T Consensus 26 KVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~---~----- 95 (345)
T 4h7p_A 26 KVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DP---R----- 95 (345)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CH---H-----
T ss_pred EEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--Ch---H-----
Confidence 589999999999999999987542 6888887653 4455555555432 222222221 11 1
Q ss_pred HHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC--CCCeEEEecCCC
Q 028868 71 VTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS--GNGSIVFISSVG 139 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~iv~vsS~~ 139 (202)
+.+ ..-|++|..||.... | .++.+ +.++.|..=.-.+ .+.+.+. +...|+.+|...
T Consensus 96 --~a~-~~advVvi~aG~prk-p--GmtR~---DLl~~Na~I~~~~----~~~i~~~a~~~~~vlvvsNPv 153 (345)
T 4h7p_A 96 --VAF-DGVAIAIMCGAFPRK-A--GMERK---DLLEMNARIFKEQ----GEAIAAVAASDCRVVVVGNPA 153 (345)
T ss_dssp --HHT-TTCSEEEECCCCCCC-T--TCCHH---HHHHHHHHHHHHH----HHHHHHHSCTTCEEEECSSSH
T ss_pred --HHh-CCCCEEEECCCCCCC-C--CCCHH---HHHHHhHHHHHHH----HHHHHhhccCceEEEEeCCCc
Confidence 123 468999999997542 2 23443 4567776644444 4444432 234566677653
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.019 Score=45.38 Aligned_cols=114 Identities=11% Similarity=0.010 Sum_probs=68.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
++.|+|+ |.+|.+++..|+..|. +|++.+.++++++....++.+.. .++.+. . .+ .+.+
T Consensus 9 KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~-----------~~a~- 72 (318)
T 1y6j_A 9 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD-----------YSDV- 72 (318)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C-----------GGGG-
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC-----------HHHh-
Confidence 5889998 9999999999999987 89999999887766566654421 112111 1 11 1113
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
..-|++|.++|.... + ..+. .+.+..|+.-...+++.+.++ ...+.++++|...+
T Consensus 73 ~~aDvVii~~g~p~k-~--g~~r---~dl~~~n~~i~~~i~~~i~~~---~p~a~viv~tNPv~ 127 (318)
T 1y6j_A 73 KDCDVIVVTAGANRK-P--GETR---LDLAKKNVMIAKEVTQNIMKY---YNHGVILVVSNPVD 127 (318)
T ss_dssp TTCSEEEECCCC---------CH---HHHHHHHHHHHHHHHHHHHHH---CCSCEEEECSSSHH
T ss_pred CCCCEEEEcCCCCCC-C--CcCH---HHHHHhhHHHHHHHHHHHHHh---CCCcEEEEecCcHH
Confidence 468999999997432 1 1222 245667777666666665444 34567777665543
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.01 Score=45.21 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=55.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
+++.|+|++|.+|+.+++.+.+. +++|+......+.++.... ...+ +..|.+.++...+.+..+.+. .+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~----~~~D---vvIDfT~p~a~~~~~~~a~~~---g~ 70 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD----GNTE---VVIDFTHPDVVMGNLEFLIDN---GI 70 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH----TTCC---EEEECSCTTTHHHHHHHHHHT---TC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc----cCCc---EEEEccChHHHHHHHHHHHHc---CC
Confidence 46899999999999999999876 8888755443333333221 2233 446889888888777776554 57
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
++|+-..|+
T Consensus 71 ~~VigTTG~ 79 (245)
T 1p9l_A 71 HAVVGTTGF 79 (245)
T ss_dssp EEEECCCCC
T ss_pred CEEEcCCCC
Confidence 889888874
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.054 Score=42.56 Aligned_cols=115 Identities=17% Similarity=0.086 Sum_probs=71.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+|+ |.+|.+++..|+.. |.+|++.++++++++....++.+. .....+... +|. .+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~----------~~- 66 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY----------AD- 66 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG----------GG-
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH----------HH-
Confidence 57889998 99999999999985 789999999988777654344321 111111111 111 11
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVG 139 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~ 139 (202)
+ ...|++|.+++.... + ..+ -.+.++.|+.-...+.+.+.++ ...+.+++++...
T Consensus 67 l-~~aDvViiav~~p~~-~--g~~---r~dl~~~n~~i~~~i~~~i~~~---~~~~~viv~tNP~ 121 (310)
T 1guz_A 67 T-ANSDIVIITAGLPRK-P--GMT---REDLLMKNAGIVKEVTDNIMKH---SKNPIIIVVSNPL 121 (310)
T ss_dssp G-TTCSEEEECCSCCCC-T--TCC---HHHHHHHHHHHHHHHHHHHHHH---CSSCEEEECCSSH
T ss_pred H-CCCCEEEEeCCCCCC-C--CCC---HHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEEcCch
Confidence 2 467999999985321 1 112 2345667766666666666554 2356777776644
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0065 Score=49.36 Aligned_cols=40 Identities=20% Similarity=0.197 Sum_probs=35.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
++++|+|+ |.+|+.+++.+...|++|++.++++++++.+.
T Consensus 173 ~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 173 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE 212 (384)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 57999997 89999999999999999999999987776553
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.017 Score=44.20 Aligned_cols=85 Identities=12% Similarity=0.108 Sum_probs=55.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHH--------hcCCeEEEEEecCCCHHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWK--------NKGFKVTGSVCDLSSREQREKLIETVT 72 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~--------~~~~~v~~~~~Dv~~~~~i~~~~~~~~ 72 (202)
++.|.|+ |.+|..+++.|.+.|++ |.+.+|++++.+...+.+. +.-.++.++..-+. ...+.++++++.
T Consensus 12 ~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi~av~-~~~~~~v~~~l~ 89 (266)
T 3d1l_A 12 PIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYIVSLK-DSAFAELLQGIV 89 (266)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEEECCC-HHHHHHHHHHHH
T ss_pred eEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEEEecC-HHHHHHHHHHHH
Confidence 5788997 89999999999999998 8899999988777665421 10011222222222 345677777776
Q ss_pred HHhCCCccEEEEcCCCC
Q 028868 73 SIFQGKLNILINNAAIA 89 (202)
Q Consensus 73 ~~~~~~id~vi~~ag~~ 89 (202)
... .+=.+++++.+..
T Consensus 90 ~~~-~~~~ivv~~s~~~ 105 (266)
T 3d1l_A 90 EGK-REEALMVHTAGSI 105 (266)
T ss_dssp TTC-CTTCEEEECCTTS
T ss_pred hhc-CCCcEEEECCCCC
Confidence 544 2334677776543
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.048 Score=42.99 Aligned_cols=113 Identities=12% Similarity=0.009 Sum_probs=67.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG----FKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~----~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+|+ |.+|.+++..|+..|. +|++.++++++++.....+.+.. .++.+.. | +. +.
T Consensus 7 ~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~-----------~a 71 (316)
T 1ldn_A 7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--DY-----------DD 71 (316)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--CG-----------GG
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--cH-----------HH
Confidence 47899999 9999999999998874 89999999876665444444321 1233221 2 10 11
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVG 139 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~ 139 (202)
+ ..-|+||.++|....... +.+ +.+..|.. +.+.+.+.+.+ ...+.++++|...
T Consensus 72 l-~~aDvViia~~~~~~~g~---~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~~iv~tNPv 126 (316)
T 1ldn_A 72 C-RDADLVVICAGANQKPGE---TRL---DLVDKNIA----IFRSIVESVMASGFQGLFLVATNPV 126 (316)
T ss_dssp T-TTCSEEEECCSCCCCTTT---CSG---GGHHHHHH----HHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred h-CCCCEEEEcCCCCCCCCC---CHH---HHHHcChH----HHHHHHHHHHHHCCCCEEEEeCCch
Confidence 2 468999999997543221 211 22445543 33333333333 2345666666543
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.01 Score=46.90 Aligned_cols=86 Identities=12% Similarity=0.094 Sum_probs=56.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH-------HHhcCCeEEEEEecCCCHHHHHHHHH--HH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLIE--TV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dv~~~~~i~~~~~--~~ 71 (202)
+++.|.|+ |.+|..+++.|++.|++|++.+|++++.+.+.+. +.+.-.+..++..-+.+...++.++. .+
T Consensus 32 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~~~~ 110 (320)
T 4dll_A 32 RKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFAQGV 110 (320)
T ss_dssp SEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTTTCH
T ss_pred CEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcchhH
Confidence 36788877 8999999999999999999999999887665432 11100112333344555666776665 45
Q ss_pred HHHhCCCccEEEEcCCC
Q 028868 72 TSIFQGKLNILINNAAI 88 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~ 88 (202)
.+.. .+=.++|+....
T Consensus 111 ~~~l-~~~~~vi~~st~ 126 (320)
T 4dll_A 111 AAAM-KPGSLFLDMASI 126 (320)
T ss_dssp HHHC-CTTCEEEECSCC
T ss_pred HhhC-CCCCEEEecCCC
Confidence 5544 344566766553
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0011 Score=51.65 Aligned_cols=40 Identities=15% Similarity=0.224 Sum_probs=34.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~ 41 (202)
|+++|+|+ ||+|++++..|.+.|+ +|.+.+|+.++.+.+.
T Consensus 118 k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la 158 (277)
T 3don_A 118 AYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS 158 (277)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 57999998 7999999999999999 8999999987765543
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.024 Score=43.62 Aligned_cols=82 Identities=18% Similarity=0.116 Sum_probs=52.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH---------HHh-cCCeEEEEEecCCCHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE---------WKN-KGFKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~---------~~~-~~~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
+++.|.|+ |.+|.++++.|.+.|++|++.+|++++.+.+.+. +.+ ...++.++. + ....+.+++++
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~vi~a--v-~~~~~~~~~~~ 76 (279)
T 2f1k_A 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLC--T-PIQLILPTLEK 76 (279)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEEC--S-CHHHHHHHHHH
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCCCCccccCCHHHhCCCCEEEEE--C-CHHHHHHHHHH
Confidence 57889995 8999999999999999999999998877664321 000 011222222 2 24566777777
Q ss_pred HHHHhCCCccEEEEcCC
Q 028868 71 VTSIFQGKLNILINNAA 87 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag 87 (202)
+.... .+=.++++.++
T Consensus 77 l~~~~-~~~~~vv~~~~ 92 (279)
T 2f1k_A 77 LIPHL-SPTAIVTDVAS 92 (279)
T ss_dssp HGGGS-CTTCEEEECCS
T ss_pred HHhhC-CCCCEEEECCC
Confidence 76554 22235555533
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.05 Score=43.07 Aligned_cols=73 Identities=10% Similarity=-0.013 Sum_probs=51.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCeEEEEE-ecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSV-CDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~-~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+|| |.+|..++..|+..|. .|++.+.++++++.....+.+. .....+.. .|. +.
T Consensus 5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~--------------~a 69 (322)
T 1t2d_A 5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY--------------DD 69 (322)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG--------------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH--------------HH
Confidence 46889998 9999999999999998 8999999998887655555431 11111111 221 11
Q ss_pred hCCCccEEEEcCCCC
Q 028868 75 FQGKLNILINNAAIA 89 (202)
Q Consensus 75 ~~~~id~vi~~ag~~ 89 (202)
+ ..-|+||.++|..
T Consensus 70 l-~~aD~Vi~a~g~p 83 (322)
T 1t2d_A 70 L-AGADVVIVTAGFT 83 (322)
T ss_dssp G-TTCSEEEECCSCS
T ss_pred h-CCCCEEEEeCCCC
Confidence 2 4679999999965
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0075 Score=47.18 Aligned_cols=39 Identities=21% Similarity=0.175 Sum_probs=34.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
|++.|.|+ |.+|.++|..|++.|++|++.++++++++..
T Consensus 16 ~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 46889998 8999999999999999999999998877654
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=96.48 E-value=0.03 Score=43.33 Aligned_cols=162 Identities=14% Similarity=0.157 Sum_probs=92.4
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CCEEE-EEeCChhHH--HHH----------------HHHHHhcCCeEEEEEecCCCH
Q 028868 2 TALVTGGTRGIGHATVEELARF-GAIVH-TCSRNQIEL--DAR----------------LHEWKNKGFKVTGSVCDLSSR 61 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~-g~~Vi-~~~r~~~~~--~~~----------------~~~~~~~~~~v~~~~~Dv~~~ 61 (202)
++.|+|++|.+|+.+++.+.+. |++|+ +++++++.. ..+ .+++.. ..++ -.|.+.+
T Consensus 7 kV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~-~~Dv---VIDft~p 82 (273)
T 1dih_A 7 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD-DFDV---FIDFTRP 82 (273)
T ss_dssp EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT-SCSE---EEECSCH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc-CCCE---EEEcCCh
Confidence 6899999999999999998854 66776 555554221 000 011111 2233 3488888
Q ss_pred HHHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHH----------H----hHhHHHHHHHHhHHHhcC
Q 028868 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSST----------N----FESVFHLSQLAHPLFKAS 127 (202)
Q Consensus 62 ~~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~----------n----~~~~~~~~~~~~~~~~~~ 127 (202)
+...+.+..+.+. .+++|+-+.|+ +.++.+.+.+. | +--.+.+++.+.++|..
T Consensus 83 ~~~~~~~~~a~~~---G~~vVigTtG~---------~~e~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~- 149 (273)
T 1dih_A 83 EGTLNHLAFCRQH---GKGMVIGTTGF---------DEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGD- 149 (273)
T ss_dssp HHHHHHHHHHHHT---TCEEEECCCCC---------CHHHHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHhC---CCCEEEECCCC---------CHHHHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCC-
Confidence 8877777776654 46788877764 22333222221 1 01133445555555532
Q ss_pred CCCeEEEecCCCCccCCCCChhhhhhHHHHHHHHHHHHHHHc---------------cCCcEEEEeeCCccc
Q 028868 128 GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA---------------KDNIRTNTVAPWVIK 184 (202)
Q Consensus 128 ~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~---------------~~gi~v~~v~pG~v~ 184 (202)
.-.|=.+ -.+....-.++|+.++...+.+.+.+...+. +.+|.|.++.-|-+.
T Consensus 150 -~~dieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vv 217 (273)
T 1dih_A 150 -YTDIEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIV 217 (273)
T ss_dssp -TSEEEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCC
T ss_pred -CCCEEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCC
Confidence 1122222 1233444456789999888888776654321 357889988866553
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.068 Score=42.02 Aligned_cols=114 Identities=15% Similarity=0.120 Sum_probs=70.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCeEEEEE-ecCCCHHHHHHHHHHHHHHh
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSV-CDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~-~Dv~~~~~i~~~~~~~~~~~ 75 (202)
++.|+|| |.+|.+++..++..|. .|++.+.++++++....++.+. +....+.. .|. +.+
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--------------~a~ 65 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY--------------EDM 65 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG--------------GGG
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH--------------HHh
Confidence 3678998 9999999999998887 7999999988887655555432 22222222 221 112
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG 140 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~ 140 (202)
..-|+||..+|...... .+.+ +.+..|..-...+++.+.++ ...+.++++|....
T Consensus 66 -~~aD~Vi~~ag~~~k~G---~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~tNPv~ 120 (308)
T 2d4a_B 66 -RGSDIVLVTAGIGRKPG---MTRE---QLLEANANTMADLAEKIKAY---AKDAIVVITTNPVD 120 (308)
T ss_dssp -TTCSEEEECCSCCCCSS---CCTH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECCSSHH
T ss_pred -CCCCEEEEeCCCCCCCC---CcHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCchH
Confidence 46899999999754222 2222 33555555444444443322 34567777777543
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=96.43 E-value=0.003 Score=50.25 Aligned_cols=71 Identities=11% Similarity=-0.009 Sum_probs=52.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+.++|.|+ |.+|+.+++.|.++|. |+++++++++.+ ..+ .++.++..|.++++.++++- . .+.|
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a~------i-~~a~ 179 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKAN------V-RGAR 179 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHTC------S-TTEE
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhcC------h-hhcc
Confidence 36899997 8999999999999999 999999998776 332 24677888988877655431 1 2456
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.++...+
T Consensus 180 ~vi~~~~ 186 (336)
T 1lnq_A 180 AVIVDLE 186 (336)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 6665443
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0054 Score=47.45 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=38.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~ 44 (202)
|+++|.|+ ||.|++++..|.+.|+ +|.+..|+.++.+.+.+++
T Consensus 120 ~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~ 163 (271)
T 1npy_A 120 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 163 (271)
T ss_dssp SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc
Confidence 46899997 7999999999999998 8999999998888877665
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0078 Score=48.57 Aligned_cols=43 Identities=21% Similarity=0.214 Sum_probs=37.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
|+++|+|+ |.+|..+|++|.+.|++|++.+++.++++...+++
T Consensus 174 ktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ 216 (364)
T 1leh_A 174 LAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 216 (364)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence 68999997 89999999999999999999999988877766654
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0087 Score=47.06 Aligned_cols=85 Identities=16% Similarity=0.030 Sum_probs=54.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH-------HHhcCCeEEEEEecCCCHHHHHHHH---HH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLI---ET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dv~~~~~i~~~~---~~ 70 (202)
+++.|.|+ |.+|..+|+.|++.|++|++.+|++++.+.+.+. ..+.-.+..++..=+.+...+++++ +.
T Consensus 22 ~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~ 100 (310)
T 3doj_A 22 MEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEHGASVCESPAEVIKKCKYTIAMLSDPCAALSVVFDKGG 100 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCeEcCCHHHHHHhCCEEEEEcCCHHHHHHHHhCchh
Confidence 46788876 7999999999999999999999999877665431 0000001233334455566666666 44
Q ss_pred HHHHhCCCccEEEEcCC
Q 028868 71 VTSIFQGKLNILINNAA 87 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag 87 (202)
+.... .+=.++|+...
T Consensus 101 l~~~l-~~g~~vv~~st 116 (310)
T 3doj_A 101 VLEQI-CEGKGYIDMST 116 (310)
T ss_dssp GGGGC-CTTCEEEECSC
T ss_pred hhhcc-CCCCEEEECCC
Confidence 44433 23356666654
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0081 Score=49.85 Aligned_cols=75 Identities=23% Similarity=0.337 Sum_probs=51.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|.|. |+.|.+.|+.|.++|++|.+.++++.......+.+.+.+..+. ...-.+ +.+.+..|
T Consensus 10 k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~--~g~~~~------------~~~~~~~d 74 (451)
T 3lk7_A 10 KKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVV--CGSHPL------------ELLDEDFC 74 (451)
T ss_dssp CEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEE--ESCCCG------------GGGGSCEE
T ss_pred CEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEE--ECCChH------------HhhcCCCC
Confidence 57899999 7999999999999999999999865432233445555555433 221111 11112389
Q ss_pred EEEEcCCCCC
Q 028868 81 ILINNAAIAF 90 (202)
Q Consensus 81 ~vi~~ag~~~ 90 (202)
.||.++|+..
T Consensus 75 ~vv~spgi~~ 84 (451)
T 3lk7_A 75 YMIKNPGIPY 84 (451)
T ss_dssp EEEECTTSCT
T ss_pred EEEECCcCCC
Confidence 9999999854
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.025 Score=44.95 Aligned_cols=76 Identities=21% Similarity=0.215 Sum_probs=47.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-C
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-K 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~ 78 (202)
.+++|+|| |++|...+..+... |++|+.+++++++++.+. +.+.+..+ |-.+.+.. +++.+..++ .
T Consensus 165 ~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~----~~Ga~~~i---~~~~~~~~----~~v~~~t~g~g 232 (348)
T 4eez_A 165 DWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK----KIGADVTI---NSGDVNPV----DEIKKITGGLG 232 (348)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH----HTTCSEEE---EC-CCCHH----HHHHHHTTSSC
T ss_pred CEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh----hcCCeEEE---eCCCCCHH----HHhhhhcCCCC
Confidence 37899987 78888777777765 679999999987765433 33443332 33333332 333333323 5
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|.++.+++.
T Consensus 233 ~d~~~~~~~~ 242 (348)
T 4eez_A 233 VQSAIVCAVA 242 (348)
T ss_dssp EEEEEECCSC
T ss_pred ceEEEEeccC
Confidence 8888888773
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.012 Score=45.95 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=54.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH--------HhcCCeEEEEEecCCCHHHHHHHH---H
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW--------KNKGFKVTGSVCDLSSREQREKLI---E 69 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~--------~~~~~~v~~~~~Dv~~~~~i~~~~---~ 69 (202)
+++.|.|+ |.+|.++++.|++.|++|++.+|++++.+.+.+.- .+.-.+..++..-+.+...++.++ +
T Consensus 8 ~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e~~~~aDvvi~~vp~~~~~~~v~~~~~ 86 (303)
T 3g0o_A 8 FHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFGED 86 (303)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCSEEESSSTTTTTTCSEEEECCSSHHHHHHHHC--C
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccCCHHHHHhcCCEEEEECCCHHHHHHHHhChh
Confidence 45778876 89999999999999999999999998877665420 000012233344445555566655 4
Q ss_pred HHHHHhCCCccEEEEcCC
Q 028868 70 TVTSIFQGKLNILINNAA 87 (202)
Q Consensus 70 ~~~~~~~~~id~vi~~ag 87 (202)
.+.... .+=.++|+...
T Consensus 87 ~l~~~l-~~g~ivv~~st 103 (303)
T 3g0o_A 87 GVAHLM-KPGSAVMVSST 103 (303)
T ss_dssp CCGGGS-CTTCEEEECSC
T ss_pred hHHhhC-CCCCEEEecCC
Confidence 444433 23356666654
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0058 Score=45.45 Aligned_cols=39 Identities=18% Similarity=0.096 Sum_probs=33.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
+++.|+| .|.+|.++++.|.+.|++|++.+|++++.+..
T Consensus 29 ~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~ 67 (215)
T 2vns_A 29 PKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL 67 (215)
T ss_dssp CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred CEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3578898 69999999999999999999999998766543
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.022 Score=45.18 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=48.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|+|+ |++|...++.+...|++ ++.+++++++++.+. +.|.+..+ |-.+.+ ..+....+.+. ...
T Consensus 162 ~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~----~lGa~~~i---~~~~~~-~~~~~~~~~~~--~g~ 230 (346)
T 4a2c_A 162 KNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK----SFGAMQTF---NSSEMS-APQMQSVLREL--RFN 230 (346)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCSEEE---ETTTSC-HHHHHHHHGGG--CSS
T ss_pred CEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH----HcCCeEEE---eCCCCC-HHHHHHhhccc--CCc
Confidence 47899987 89999999888889985 567788877765432 33443332 333222 22223333222 468
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+++.++|.
T Consensus 231 d~v~d~~G~ 239 (346)
T 4a2c_A 231 QLILETAGV 239 (346)
T ss_dssp EEEEECSCS
T ss_pred ccccccccc
Confidence 999998883
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=96.29 E-value=0.032 Score=47.73 Aligned_cols=57 Identities=14% Similarity=0.187 Sum_probs=42.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC-------------------hhHHHHHHHHHHhc--CCeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN-------------------QIELDARLHEWKNK--GFKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~-------------------~~~~~~~~~~~~~~--~~~v~~~~~Dv 58 (202)
++|+|.|+ ||+|.++++.|+..|. ++.++|.+ ..+.+.+.+.+.+. ..++..+..++
T Consensus 328 ~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~~~~~I 406 (598)
T 3vh1_A 328 TKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGVKLSI 406 (598)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEEECCCC
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEEEeccc
Confidence 46899998 6999999999999998 88888654 13566666666654 44566665554
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.27 E-value=0.011 Score=46.17 Aligned_cols=79 Identities=13% Similarity=0.101 Sum_probs=51.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++.|.||.|.||.++++.|.+.|++|++.+|+++.. ..+.+ ...++.++.+-.. .+.++++++.... .+=.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~--~~aDvVilavp~~---~~~~vl~~l~~~l-~~~~ 93 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESIL--ANADVVIVSVPIN---LTLETIERLKPYL-TENM 93 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHH--TTCSEEEECSCGG---GHHHHHHHHGGGC-CTTS
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHh--cCCCEEEEeCCHH---HHHHHHHHHHhhc-CCCc
Confidence 3688999889999999999999999999999987531 11112 2345666555433 3666677765544 2223
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+|+..++
T Consensus 94 iv~~~~s 100 (298)
T 2pv7_A 94 LLADLTS 100 (298)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 5555544
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.011 Score=46.10 Aligned_cols=41 Identities=17% Similarity=0.133 Sum_probs=35.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH 42 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~ 42 (202)
+++.|.|+ |.+|..+|..|.+.|++|.+.+|++++.+.+.+
T Consensus 4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~ 44 (316)
T 2ew2_A 4 MKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRK 44 (316)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHh
Confidence 46889997 899999999999999999999999887766544
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0076 Score=46.62 Aligned_cols=41 Identities=24% Similarity=0.249 Sum_probs=35.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH 42 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~ 42 (202)
|+++|.|+ |++|+++++.|.+.|++|.+.+|++++.+.+.+
T Consensus 130 ~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~ 170 (275)
T 2hk9_A 130 KSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ 170 (275)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH
Confidence 57899997 799999999999999999999999877665543
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=96.20 E-value=0.014 Score=44.25 Aligned_cols=82 Identities=13% Similarity=0.133 Sum_probs=52.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC----EEEEEeCChhHHHHHHHHHH--------h--cCCeEEEEEecCCCHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA----IVHTCSRNQIELDARLHEWK--------N--KGFKVTGSVCDLSSREQREK 66 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~----~Vi~~~r~~~~~~~~~~~~~--------~--~~~~v~~~~~Dv~~~~~i~~ 66 (202)
+++.|.|+ |.+|.++++.|.+.|+ +|.+.+|++++.+.+.+++. + ...++.++.+. +..+.+
T Consensus 3 ~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~e~~~~aDvVilav~---~~~~~~ 78 (247)
T 3gt0_A 3 KQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYGLTTTTDNNEVAKNADILILSIK---PDLYAS 78 (247)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHCCEECSCHHHHHHHCSEEEECSC---TTTHHH
T ss_pred CeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhCCEEeCChHHHHHhCCEEEEEeC---HHHHHH
Confidence 35778885 8999999999999998 99999999988877765431 0 02345555553 445556
Q ss_pred HHHHHHHHhCCCccEEEEcCC
Q 028868 67 LIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 67 ~~~~~~~~~~~~id~vi~~ag 87 (202)
+++++.... .+=.++|...+
T Consensus 79 v~~~l~~~l-~~~~~vvs~~~ 98 (247)
T 3gt0_A 79 IINEIKEII-KNDAIIVTIAA 98 (247)
T ss_dssp HC---CCSS-CTTCEEEECSC
T ss_pred HHHHHHhhc-CCCCEEEEecC
Confidence 666654433 12235665544
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.034 Score=41.04 Aligned_cols=72 Identities=11% Similarity=0.063 Sum_probs=51.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++.|.| .|.+|.++++.|.+.|++|++.+|+++ .-...++.++.+- ...+.++++++.... . =.
T Consensus 20 ~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------~~~~aD~vi~av~---~~~~~~v~~~l~~~~-~-~~ 84 (209)
T 2raf_A 20 MEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------ATTLGEIVIMAVP---YPALAALAKQYATQL-K-GK 84 (209)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------CSSCCSEEEECSC---HHHHHHHHHHTHHHH-T-TS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------HhccCCEEEEcCC---cHHHHHHHHHHHHhc-C-CC
Confidence 4688999 589999999999999999999999876 1123345554443 667778888776665 2 23
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++....
T Consensus 85 ~vi~~~~ 91 (209)
T 2raf_A 85 IVVDITN 91 (209)
T ss_dssp EEEECCC
T ss_pred EEEEECC
Confidence 5555544
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0077 Score=46.72 Aligned_cols=85 Identities=15% Similarity=0.028 Sum_probs=53.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH-------HHhcCCeEEEEEecCCCHHHHHHHH---HH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE-------WKNKGFKVTGSVCDLSSREQREKLI---ET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~-------~~~~~~~v~~~~~Dv~~~~~i~~~~---~~ 70 (202)
|++.|.|+ |.+|.++++.|++.|++|.+.+|++++.+.+.+. ..+.-.+..++..=+.+...+++.+ +.
T Consensus 2 ~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~advvi~~v~~~~~~~~v~~~~~~ 80 (287)
T 3pdu_A 2 TTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVALGARQASSPAEVCAACDITIAMLADPAAAREVCFGANG 80 (287)
T ss_dssp CCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHHTCEECSCHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHHcCCEEEEEcCCHHHHHHHHcCchh
Confidence 35777874 8999999999999999999999999877665432 0000001233334445555666665 44
Q ss_pred HHHHhCCCccEEEEcCC
Q 028868 71 VTSIFQGKLNILINNAA 87 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag 87 (202)
+.+.. .+=.++|+...
T Consensus 81 l~~~l-~~g~~vv~~st 96 (287)
T 3pdu_A 81 VLEGI-GGGRGYIDMST 96 (287)
T ss_dssp GGGTC-CTTCEEEECSC
T ss_pred hhhcc-cCCCEEEECCC
Confidence 44433 23356666554
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.013 Score=45.87 Aligned_cols=38 Identities=24% Similarity=0.252 Sum_probs=33.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA 39 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~ 39 (202)
|+++|.|+ |.||+++++.+...|++|++.+|+.++.+.
T Consensus 158 ~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~ 195 (300)
T 2rir_A 158 SQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR 195 (300)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 68999997 899999999999999999999999866544
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.11 E-value=0.017 Score=46.41 Aligned_cols=77 Identities=16% Similarity=0.183 Sum_probs=53.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh-------------------hHHHHHHHHHHhc--CCeEEEEEecC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ-------------------IELDARLHEWKNK--GFKVTGSVCDL 58 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~-------------------~~~~~~~~~~~~~--~~~v~~~~~Dv 58 (202)
++|+|.|+ ||+|.++++.|+..|. ++.+++++. .+.+.+.+.+.+. ..++..+..++
T Consensus 119 ~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~i 197 (353)
T 3h5n_A 119 AKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNI 197 (353)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEECCC
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeeccc
Confidence 46899998 7999999999999998 888988753 2444455555443 44667777777
Q ss_pred CCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 59 SSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 59 ~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
+....+ .+ + ...|+||.+..
T Consensus 198 ~~~~~~-------~~-~-~~~DlVvd~~D 217 (353)
T 3h5n_A 198 NDYTDL-------HK-V-PEADIWVVSAD 217 (353)
T ss_dssp CSGGGG-------GG-S-CCCSEEEECCC
T ss_pred Cchhhh-------hH-h-ccCCEEEEecC
Confidence 664421 12 3 46788888654
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.025 Score=45.05 Aligned_cols=74 Identities=16% Similarity=0.220 Sum_probs=44.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++++|+||+|++|...++.+...| .+|+.++ +.++.+.+. .+.+.. + | .+.+- .+++++..++.+
T Consensus 144 ~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-----~ga~~~-~--~-~~~~~----~~~~~~~~~~g~ 209 (349)
T 4a27_A 144 MSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-----DSVTHL-F--D-RNADY----VQEVKRISAEGV 209 (349)
T ss_dssp CEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-----GGSSEE-E--E-TTSCH----HHHHHHHCTTCE
T ss_pred CEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-----cCCcEE-E--c-CCccH----HHHHHHhcCCCc
Confidence 479999999999998877665564 5888877 444443332 233222 2 3 22222 223333334579
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+++.++|.
T Consensus 210 Dvv~d~~g~ 218 (349)
T 4a27_A 210 DIVLDCLCG 218 (349)
T ss_dssp EEEEEECC-
T ss_pred eEEEECCCc
Confidence 999999984
|
| >3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.018 Score=45.62 Aligned_cols=43 Identities=16% Similarity=0.125 Sum_probs=36.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
++|.|.|| |-+|..+|..++..|++|++.+.+++.+++..+.+
T Consensus 7 ~~VaViGa-G~MG~giA~~~a~~G~~V~l~D~~~~~l~~~~~~i 49 (319)
T 3ado_A 7 GDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGALENI 49 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHHH
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHH
Confidence 36788988 79999999999999999999999988776655444
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.021 Score=47.49 Aligned_cols=74 Identities=16% Similarity=0.178 Sum_probs=56.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|.++|.|| |.+|..+|+.| +.+++|.++.++.++.+.+.+++. +..++..|.+|.+-+.+. .. ...|
T Consensus 236 ~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~----~~~Vi~GD~td~~~L~ee------~i-~~~D 302 (461)
T 4g65_A 236 RRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELE----NTIVFCGDAADQELLTEE------NI-DQVD 302 (461)
T ss_dssp CEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCT----TSEEEESCTTCHHHHHHT------TG-GGCS
T ss_pred cEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCC----CceEEeccccchhhHhhc------Cc-hhhc
Confidence 56888887 69999999997 467899999999999888887764 477889999996553322 11 3578
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.+|-..+
T Consensus 303 ~~ia~T~ 309 (461)
T 4g65_A 303 VFIALTN 309 (461)
T ss_dssp EEEECCS
T ss_pred EEEEccc
Confidence 8877555
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.97 E-value=0.036 Score=43.00 Aligned_cols=40 Identities=18% Similarity=0.182 Sum_probs=34.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
+++.|.|+ |.+|..+++.|.+.|++|.+.+|++++.+...
T Consensus 6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~ 45 (299)
T 1vpd_A 6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI 45 (299)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH
Confidence 36889995 89999999999999999999999988766544
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=95.97 E-value=0.033 Score=42.89 Aligned_cols=73 Identities=12% Similarity=0.004 Sum_probs=47.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHH------HHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE------WKNKGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~------~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|.|+ |.+|..+++.|.+ |++|.+.+|++++.+...+. ..+.-.+..++..-+.+...+..+++.+...
T Consensus 2 ~~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~D~vi~~v~~~~~~~~v~~~l~~~ 79 (289)
T 2cvz_A 2 EKVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPY 79 (289)
T ss_dssp CCEEEECC-STTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTT
T ss_pred CeEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHCCCcccCHHHHHhCCCEEEEeCCChHHHHHHHHHHHhh
Confidence 35778886 8999999999999 99999999998877665442 0010012233334444455566666666544
Q ss_pred h
Q 028868 75 F 75 (202)
Q Consensus 75 ~ 75 (202)
.
T Consensus 80 l 80 (289)
T 2cvz_A 80 L 80 (289)
T ss_dssp C
T ss_pred C
Confidence 3
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 202 | ||||
| d2ae2a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-56 | |
| d1xq1a_ | 259 | c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara | 2e-55 | |
| d2ew8a1 | 247 | c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas | 3e-52 | |
| d2d1ya1 | 248 | c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T | 7e-52 | |
| d1ae1a_ | 258 | c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu | 2e-49 | |
| d1spxa_ | 264 | c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato | 3e-49 | |
| d1yb1a_ | 244 | c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase | 3e-49 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 4e-47 | |
| d1xkqa_ | 272 | c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh | 1e-45 | |
| d1ydea1 | 250 | c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase | 4e-44 | |
| d1cyda_ | 242 | c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul | 4e-44 | |
| d2c07a1 | 251 | c.2.1.2 (A:54-304) beta-keto acyl carrier protein | 5e-44 | |
| d1hxha_ | 253 | c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge | 2e-43 | |
| d1xhla_ | 274 | c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh | 5e-43 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 6e-43 | |
| d1zk4a1 | 251 | c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase | 1e-42 | |
| d1hdca_ | 254 | c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr | 1e-42 | |
| d1pr9a_ | 244 | c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie | 1e-42 | |
| d1h5qa_ | 260 | c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga | 1e-42 | |
| d2bd0a1 | 240 | c.2.1.2 (A:2-241) Bacterial sepiapterin reductase | 2e-42 | |
| d1ulsa_ | 242 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 4e-41 | |
| d2gdza1 | 254 | c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog | 8e-41 | |
| d1vl8a_ | 251 | c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga | 2e-40 | |
| d1g0oa_ | 272 | c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase | 8e-40 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 1e-39 | |
| d2bgka1 | 268 | c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de | 2e-39 | |
| d1sbya1 | 254 | c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase | 7e-39 | |
| d1wmaa1 | 275 | c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox | 7e-39 | |
| d1zema1 | 260 | c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba | 8e-39 | |
| d2rhca1 | 257 | c.2.1.2 (A:5-261) beta-keto acyl carrier protein r | 1e-38 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 2e-38 | |
| d1bdba_ | 276 | c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy | 4e-38 | |
| d1fmca_ | 255 | c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase | 2e-37 | |
| d1ja9a_ | 259 | c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc | 3e-37 | |
| d1zmta1 | 252 | c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag | 3e-37 | |
| d1xu9a_ | 269 | c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase | 3e-37 | |
| d1jtva_ | 285 | c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi | 5e-37 | |
| d1edoa_ | 244 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-36 | |
| d1nffa_ | 244 | c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob | 3e-36 | |
| d1uaya_ | 241 | c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena | 5e-36 | |
| d1q7ba_ | 243 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-35 | |
| d1iy8a_ | 258 | c.2.1.2 (A:) Levodione reductase {Corynebacterium | 1e-35 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 8e-35 | |
| d1geea_ | 261 | c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat | 1e-34 | |
| d1w6ua_ | 294 | c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr | 1e-34 | |
| d1o5ia_ | 234 | c.2.1.2 (A:) beta-keto acyl carrier protein reduct | 1e-34 | |
| d1x1ta1 | 260 | c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge | 1e-34 | |
| d2a4ka1 | 241 | c.2.1.2 (A:2-242) beta-keto acyl carrier protein r | 1e-34 | |
| d1uzma1 | 237 | c.2.1.2 (A:9-245) beta-keto acyl carrier protein r | 3e-33 | |
| d1gega_ | 255 | c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl | 3e-32 | |
| d1k2wa_ | 256 | c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s | 1e-30 | |
| d1oaaa_ | 259 | c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus | 5e-30 | |
| d1ulua_ | 256 | c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph | 9e-30 | |
| d1mxha_ | 266 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 8e-29 | |
| d2o23a1 | 248 | c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr | 2e-28 | |
| d1dhra_ | 236 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 3e-27 | |
| d1qsga_ | 258 | c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli | 3e-25 | |
| d1ooea_ | 235 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 9e-25 | |
| d1snya_ | 248 | c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly | 2e-24 | |
| d1fjha_ | 257 | c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase | 3e-20 | |
| d1luaa1 | 191 | c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter | 2e-16 | |
| d1e7wa_ | 284 | c.2.1.2 (A:) Dihydropteridin reductase (pteridine | 4e-16 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 5e-16 | |
| d2pd4a1 | 274 | c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte | 4e-15 | |
| d2fr1a1 | 259 | c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI | 2e-13 | |
| d2h7ma1 | 268 | c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri | 5e-10 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 6e-07 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-06 | |
| d1d7oa_ | 297 | c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B | 5e-06 | |
| d1uh5a_ | 329 | c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite | 1e-05 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 5e-05 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-04 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 2e-04 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 6e-04 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 0.002 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 0.002 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 0.002 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.003 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 0.003 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 0.003 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 0.004 |
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Score = 177 bits (449), Expect = 2e-56
Identities = 113/190 (59%), Positives = 139/190 (73%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTGG+RGIG+ VEELA GA V+TCSRNQ EL+ L +W++KGFKV SVCDLSSR
Sbjct: 10 TALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSR 69
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+R++L+ TV + F GKLNIL+NNA I K D T ED S + S NFE+ +HLS LAH
Sbjct: 70 SERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAH 129
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P KAS G++VFISSV G +P ++YGA KGAM+QLT+ LA EWAKDNIR N V P
Sbjct: 130 PFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPG 189
Query: 182 VIKTSMIKPF 191
VI TS+++
Sbjct: 190 VIATSLVEMT 199
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 174 bits (443), Expect = 2e-55
Identities = 116/190 (61%), Positives = 142/190 (74%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+ L +W+ KGF+VTGSVCD S R
Sbjct: 10 TVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR 69
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+REKL++TV+S+F GKL+ILINN KPT+D TAED S STN ES +HLSQLAH
Sbjct: 70 PEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAH 129
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL KASG G+I+F+SS+ GV S+Y A KGA+NQL +NLACEWA D IR N VAP
Sbjct: 130 PLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPA 189
Query: 182 VIKTSMIKPF 191
VI T + +
Sbjct: 190 VIATPLAEAV 199
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Score = 166 bits (421), Expect = 3e-52
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TGG GIG A E A GA + +N G +V CD+S
Sbjct: 7 LAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--AIRNLGRRVLTVKCDVSQP 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + V S F G+ +IL+NNA I + P ++T E N +S F +++
Sbjct: 65 GDVEAFGKQVISTF-GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFV 123
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P K +G G I+ ++S I + + Y + K A T+ LA + KD I N +AP
Sbjct: 124 PGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPS 183
Query: 182 VIKTSMIKPF 191
+++T+ +
Sbjct: 184 LVRTATTEAS 193
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Score = 165 bits (418), Expect = 7e-52
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 7/188 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTGG RGIG A + AR GA+V C E F+ DL
Sbjct: 7 GVLVTGGARGIGRAIAQAFAREGALVALCDLRP-EGKEVAEAIGGAFFQ-----VDLEDE 60
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+R + +E G++++L+NNAAIA + + + V N + HLS LA
Sbjct: 61 RERVRFVEEAAYAL-GRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAA 119
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+ G G+IV ++SV G+ + Y A KG + LT++LA + A IR N VAP
Sbjct: 120 REMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPG 179
Query: 182 VIKTSMIK 189
I T +
Sbjct: 180 AIATEAVL 187
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Score = 159 bits (402), Expect = 2e-49
Identities = 111/188 (59%), Positives = 144/188 (76%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TALVTGG++GIG+A VEELA GA V+TCSRN+ ELD L W+ KG V GSVCDL SR
Sbjct: 8 TALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSR 67
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+R+KL++TV +F GKLNIL+NNA + K D T +D + + TNFE+ +HLSQ+A+
Sbjct: 68 TERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAY 127
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
PL KAS NG+++F+SS+ G +PSVSLY A KGA+NQ+TK+LACEWAKDNIR N+VAP
Sbjct: 128 PLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPG 187
Query: 182 VIKTSMIK 189
VI T +++
Sbjct: 188 VILTPLVE 195
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 158 bits (402), Expect = 3e-49
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
A++TG + GIG AT AR GA V R+ L+ + G V V D+
Sbjct: 7 VAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV 66
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIA----FVKPTVDITAEDMSTVSSTNFESVF 114
++ +++++ T F GKL+IL+NNA A K + E + N SV
Sbjct: 67 TTDAGQDEILSTTLGKF-GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 125
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
L++ A P ++ + S G+ P Y K A++Q T+N A + + IR
Sbjct: 126 ALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIR 185
Query: 175 TNTVAPWVIKTSMIKPF 191
N+++P ++ T
Sbjct: 186 VNSISPGLVATGFGSAM 202
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 3e-49
Identities = 48/191 (25%), Positives = 78/191 (40%), Gaps = 4/191 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG GIG T E A+ + + N+ L+ + K G KV V D S+R
Sbjct: 9 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNR 68
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + V + G ++IL+NNA + + + N + F ++
Sbjct: 69 EDIYSSAKKVKAEI-GDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFL 127
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK---DNIRTNTV 178
P + +G IV ++S G +P + Y + K A K L E A ++T +
Sbjct: 128 PAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCL 187
Query: 179 APWVIKTSMIK 189
P + T IK
Sbjct: 188 CPNFVNTGFIK 198
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 153 bits (387), Expect = 4e-47
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 9/198 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLS 59
ALVTG + GIG A L + G V C+R ++ E K+ G+ + CDLS
Sbjct: 12 LALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLS 71
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ E + + S ++I INNA +A + + + + N ++ ++
Sbjct: 72 NEEDILSMFSAIRSQH-SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTRE 130
Query: 120 AHPLFKASG--NGSIVFISSVGGVRGIPS--VSLYGAYKGAMNQLTKNLACEW--AKDNI 173
A+ K +G I+ I+S+ G R +P Y A K A+ LT+ L E A+ +I
Sbjct: 131 AYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHI 190
Query: 174 RTNTVAPWVIKTSMIKPF 191
R ++P V++T
Sbjct: 191 RATCISPGVVETQFAFKL 208
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Score = 149 bits (378), Expect = 1e-45
Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
T ++TG + GIG T A+ GA V R+ L+ G +V V D+
Sbjct: 7 TVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV 66
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAI----AFVKPTVDITAEDMSTVSSTNFESVF 114
++ + ++++I + F GK+++L+NNA AF D + N ++V
Sbjct: 67 TTEDGQDQIINSTLKQF-GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVI 125
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
+++ P AS + S V G + P Y K A++Q T++ A + AK IR
Sbjct: 126 EMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIR 185
Query: 175 TNTVAPWVIKTSMIKPF 191
N+V+P +++T
Sbjct: 186 VNSVSPGMVETGFTNAM 202
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (367), Expect = 4e-44
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 7/191 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTGG RGIG V GA V C +++ + + + +CD++
Sbjct: 8 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE----SGGRALEQELPGAVFILCDVTQE 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAA-IAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ + L+ F +L+ ++NNA + + +A+ + N + L++LA
Sbjct: 64 DDVKTLVSETIRRFG-RLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLA 122
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P + S G+++ ISS+ G G Y A KGA+ +TK LA + + +R N ++P
Sbjct: 123 LPYLRKSQ-GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISP 181
Query: 181 WVIKTSMIKPF 191
I T + +
Sbjct: 182 GNIWTPLWEEL 192
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 145 bits (366), Expect = 4e-44
Identities = 63/191 (32%), Positives = 92/191 (48%), Gaps = 10/191 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +GIG TV+ L GA V +R +L + E + DL
Sbjct: 7 RALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCVDLGDW 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ EK + + G +++L+NNAA+ ++P +++T E S N SVF +SQ+
Sbjct: 63 DATEKALGGI-----GPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVA 117
Query: 122 PLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
GSIV +SS+ P++ Y + KGAM LTK +A E IR N+V P
Sbjct: 118 RDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP 177
Query: 181 WVIKTSMIKPF 191
V+ T M K
Sbjct: 178 TVVLTDMGKKV 188
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 145 bits (366), Expect = 5e-44
Identities = 58/186 (31%), Positives = 94/186 (50%), Gaps = 1/186 (0%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG RGIG + LA+ + V SR Q D+ + E K+ G++ +G D+S +
Sbjct: 12 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKK 71
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E+ ++I + ++IL+NNA I + + ++ V TN S+F+++Q
Sbjct: 72 EEISEVINKIL-TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPIS 130
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+ G I+ ISS+ G+ G + Y + K + TK+LA E A NI N +AP
Sbjct: 131 KRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPG 190
Query: 182 VIKTSM 187
I + M
Sbjct: 191 FISSDM 196
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 143 bits (362), Expect = 2e-43
Identities = 60/190 (31%), Positives = 82/190 (43%), Gaps = 7/190 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGG G+G V+ L GA V N+ E + V D+SS
Sbjct: 8 VALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFV---RHDVSSE 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ V G LN+L+NNA I ED S + N ESVF Q
Sbjct: 65 ADWTLVMAAVQRRL-GTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGI 123
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTVA 179
K +G GSI+ ++SV I + Y A K A++ LT+ A K IR N++
Sbjct: 124 AAMKETG-GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH 182
Query: 180 PWVIKTSMIK 189
P I T M++
Sbjct: 183 PDGIYTPMMQ 192
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Score = 143 bits (361), Expect = 5e-43
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 6/193 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF---KVTGSVCDL 58
+ ++TG + GIG + A+ GA V RN+ L+ + G K+ V D+
Sbjct: 6 SVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADV 65
Query: 59 SSREQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHL 116
+ ++ +I T + F GK++IL+NNA T D E NF++V +
Sbjct: 66 TEASGQDDIINTTLAKF-GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEM 124
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+Q + + S V G + Y K A++Q T+ A + + +R N
Sbjct: 125 TQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVN 184
Query: 177 TVAPWVIKTSMIK 189
+V+P + T +
Sbjct: 185 SVSPGAVATGFMG 197
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 143 bits (363), Expect = 6e-43
Identities = 50/195 (25%), Positives = 80/195 (41%), Gaps = 13/195 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIV---------HTCSRNQIELDARLHEWKNKGFKVT 52
LVTG G+G A A GA+V + D + E + +G K
Sbjct: 9 VVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAV 68
Query: 53 GSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFES 112
+ + E EKL++T F G++++++NNA I + I+ ED + +
Sbjct: 69 ANYDSV---EAGEKLVKTALDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRG 124
Query: 113 VFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
F +++ A K G I+ +S G+ G + Y A K + L L E K+N
Sbjct: 125 SFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNN 184
Query: 173 IRTNTVAPWVIKTSM 187
I NT+AP
Sbjct: 185 IHCNTIAPNAGSRMT 199
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Score = 142 bits (358), Expect = 1e-42
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TGGT GIG A + GA V R+ + ++ D S
Sbjct: 8 VAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQHDSSDE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ KL + F G ++ L+NNA IA K + T + + + N + VF ++L
Sbjct: 67 DGWTKLFDATEKAF-GPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGI 125
Query: 122 PLFKASGNGS-IVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNTV 178
K G G+ I+ +SS+ G G PS+ Y A KGA+ ++K+ A + A ++R NTV
Sbjct: 126 QRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTV 185
Query: 179 APWVIKTSMIKPF 191
P IKT ++
Sbjct: 186 HPGYIKTPLVDDL 198
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Score = 142 bits (358), Expect = 1e-42
Identities = 57/188 (30%), Positives = 80/188 (42%), Gaps = 4/188 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T ++TGG RG+G + GA V E A E G D++
Sbjct: 7 TVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIE 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E ++++ F G ++ L+NNA I+ + E V N VF +
Sbjct: 64 EDWQRVVAYAREEF-GSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVI 122
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P K +G GSIV ISS G+ G+ S YGA K + L+K A E D IR N+V P
Sbjct: 123 PAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPG 182
Query: 182 VIKTSMIK 189
+ T M
Sbjct: 183 MTYTPMTA 190
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 141 bits (356), Expect = 1e-42
Identities = 64/189 (33%), Positives = 97/189 (51%), Gaps = 10/189 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTG +GIG TV+ L GA V SR Q +LD+ + E + DL
Sbjct: 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEPVCVDLGDW 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E E+ + +V G +++L+NNAA+A ++P +++T E N +V +SQ+
Sbjct: 65 EATERALGSV-----GPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVA 119
Query: 122 PLFKASGNG-SIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A G +IV +SS R + + S+Y + KGA++ LTK +A E IR N V P
Sbjct: 120 RGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP 179
Query: 181 WVIKTSMIK 189
V+ TSM +
Sbjct: 180 TVVMTSMGQ 188
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Score = 141 bits (357), Expect = 1e-42
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 10/200 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW-KNKGFKVTGSVCDLSS 60
T +VTGG RGIG A +A GA V R+ + + K G K CD+S+
Sbjct: 11 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN 70
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ K I+ + + G ++ LI NA ++ VKP ++T ED + V N VF+ +
Sbjct: 71 TDIVTKTIQQIDADL-GPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAV 129
Query: 121 HPLFKASGNGSIVFISS--------VGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDN 172
L+ + ++S + G + Y + K A + L K LA EWA
Sbjct: 130 AKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAG 189
Query: 173 IRTNTVAPWVIKTSMIKPFE 192
IR N ++P + T +
Sbjct: 190 IRVNALSPGYVNTDQTAHMD 209
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Score = 140 bits (354), Expect = 2e-42
Identities = 50/194 (25%), Positives = 79/194 (40%), Gaps = 8/194 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQIELDARLHEWKNKGFKVTGSV 55
L+TG +GIG A E AR ++ SR +L+ E + +G
Sbjct: 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 63
Query: 56 CDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFH 115
D+S +L + + G ++ L+NNA + D+T ED +TN + F
Sbjct: 64 ADISDMADVRRLTTHIVERY-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFF 122
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
L+Q L + +G I FI+SV + S+Y K L + + K N+R
Sbjct: 123 LTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRI 182
Query: 176 NTVAPWVIKTSMIK 189
V P + T M
Sbjct: 183 TDVQPGAVYTPMWG 196
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Score = 137 bits (346), Expect = 4e-41
Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 7/190 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TG GIG AT+E A+ GA + C + L V D++
Sbjct: 7 AVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPV-----VMDVADP 61
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E+ + G+L+ +++ A I + ED V N F +++ A
Sbjct: 62 ASVERGFAEALAHL-GRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAAS 120
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+ GSIV +S + G + Y A + LT+ LA E + IR NT+AP
Sbjct: 121 EAMREKNPGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPG 179
Query: 182 VIKTSMIKPF 191
I+T M
Sbjct: 180 FIETRMTAKV 189
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Score = 137 bits (345), Expect = 8e-41
Identities = 48/198 (24%), Positives = 77/198 (38%), Gaps = 16/198 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLS 59
ALVTG +GIG A E L GA V N + K CD++
Sbjct: 5 VALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVA 64
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
++Q V F G+L+IL+NNA + ++ N SV + L
Sbjct: 65 DQQQLRDTFRKVVDHF-GRLDILVNNAGV--------NNEKNWEKTLQINLVSVISGTYL 115
Query: 120 AHPLFKASGN---GSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN--LACEWAKDNIR 174
G I+ +SS+ G+ + +Y A K + T++ LA +R
Sbjct: 116 GLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVR 175
Query: 175 TNTVAPWVIKTSMIKPFE 192
N + P + T++++ E
Sbjct: 176 LNAICPGFVNTAILESIE 193
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Score = 135 bits (341), Expect = 2e-40
Identities = 65/192 (33%), Positives = 96/192 (50%), Gaps = 3/192 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
ALVTGG+RG+G + LA G V SRN E + K G + CD+S+
Sbjct: 7 VALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN 66
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E+ +KL+E V F GKL+ ++N A I P + ++ V N +++ + A
Sbjct: 67 YEEVKKLLEAVKEKF-GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREA 125
Query: 121 HPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
L + S N SI+ I S+ +P++S Y A KG + LTK LA EW + IR N +A
Sbjct: 126 FSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIA 185
Query: 180 PWVIKTSMIKPF 191
P +T M +
Sbjct: 186 PGWYRTKMTEAV 197
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 134 bits (339), Expect = 8e-40
Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 3/191 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
ALVTG RGIG EL R G V N E + + K G ++
Sbjct: 20 VALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV 79
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E ++ E IF GKL+I+ +N+ + D+T E+ V + N F +++ A
Sbjct: 80 VEDIVRMFEEAVKIF-GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREA 138
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ + G ++ + G + +P ++Y KGA+ + +A + A I N VAP
Sbjct: 139 YKHLEIGGRLILMGSIT-GQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAP 197
Query: 181 WVIKTSMIKPF 191
IKT M
Sbjct: 198 GGIKTDMYHAV 208
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 135 bits (340), Expect = 1e-39
Identities = 63/193 (32%), Positives = 91/193 (47%), Gaps = 7/193 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-----NKGFKVTGSVC 56
A+VTGG GIG A V+EL G+ V SR L + E + K +V C
Sbjct: 14 VAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQC 73
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
++ + E+ L+++ F GK+N L+NN F+ P I+++ V TN F++
Sbjct: 74 NIRNEEEVNNLVKSTLDTF-GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYM 132
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+ + + GSIV I V G P GA + + LTK+LA EWA IR N
Sbjct: 133 CKAVYSSWMKEHGGSIVNI-IVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRIN 191
Query: 177 TVAPWVIKTSMIK 189
VAP VI +
Sbjct: 192 CVAPGVIYSQTAV 204
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Score = 133 bits (336), Expect = 2e-39
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 5/191 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TGG GIG T + R+GA V + + ++ CD++
Sbjct: 8 VAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKD 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHLSQL 119
E L++T + GKL+I+ N + P ++ ED V N F +++
Sbjct: 67 EDVRNLVDTTIAKH-GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKH 125
Query: 120 AHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
A + + GSIVF +S+ G +Y A K A+ LT +L E + IR N V
Sbjct: 126 AARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCV 185
Query: 179 APWVIKTSMIK 189
+P+++ + ++
Sbjct: 186 SPYIVASPLLT 196
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Score = 132 bits (332), Expect = 7e-39
Identities = 37/193 (19%), Positives = 67/193 (34%), Gaps = 14/193 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA-RLHEWKNKGFKVTGSVCDLS- 59
+ GIG T EL + A + N +T D++
Sbjct: 7 NVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV 66
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ +KL++ + ++ILIN A I + + + NF + + +
Sbjct: 67 PVAESKKLLKKIFDQL-KTVDILINGAGI--------LDDHQIERTIAINFTGLVNTTTA 117
Query: 120 AHPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+ G I I SV G I V +Y A K A+ T +LA +
Sbjct: 118 ILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAY 177
Query: 177 TVAPWVIKTSMIK 189
++ P + +T ++
Sbjct: 178 SINPGITRTPLVH 190
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 132 bits (333), Expect = 7e-39
Identities = 56/240 (23%), Positives = 85/240 (35%), Gaps = 49/240 (20%)
Query: 3 ALVTGGTRGIGHATVEELAR-FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTGG +GIG A V +L R F V +R+ A + + + +G D+
Sbjct: 6 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDL 65
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ L + + + G L++L+NNA IAF TNF +
Sbjct: 66 QSIRALRDFLRKEY-GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELL 124
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSL-------------------------------- 149
PL K G +V +SS+ VR + S S
Sbjct: 125 PLIKPQG--RVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182
Query: 150 ---------YGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSMIKPFEVLSV 196
YG K + L++ A + ++ D I N P ++T M P S
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSP 242
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Score = 132 bits (332), Expect = 8e-39
Identities = 57/190 (30%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LVTG IG AT LA G + N+ L+ + KG + VCD++S
Sbjct: 7 VCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSE 66
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E +++V F GK++ L NNA P D ++D + V + N FH+ +
Sbjct: 67 EAVIGTVDSVVRDF-GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAV 125
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
G IV +S+ GV+G P+++ YG KGA+ LT+ A + A NIR N ++P
Sbjct: 126 SRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISP 185
Query: 181 WVIKTSMIKP 190
+ +
Sbjct: 186 GYMGPGFMWE 195
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Score = 131 bits (330), Expect = 1e-38
Identities = 60/192 (31%), Positives = 86/192 (44%), Gaps = 3/192 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG T GIG L + G V C+R + L L E + G + G CD+ S
Sbjct: 4 VALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ E L+ V + G +++L+NNA T ++ E V TN VF +++
Sbjct: 64 PEIEALVAAVVERY-GPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVL 122
Query: 122 PLF--KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
G G IV I+S GG +G+ + Y A K + TK L E A+ I N V
Sbjct: 123 KAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 182
Query: 180 PWVIKTSMIKPF 191
P ++T M
Sbjct: 183 PGFVETPMAASV 194
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 130 bits (328), Expect = 2e-38
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 11/191 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
++T +GIG A AR GA V N+ +L K + V D++ +
Sbjct: 8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-----LEKYPGIQTRVLDVTKK 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+Q ++ V + +L N A +D +D + N S++ + +
Sbjct: 63 KQIDQFANEVERLD-----VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFL 117
Query: 122 PLFKASGNGSIVFISSV-GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
P A +G+I+ +SSV V+G+ + +Y K A+ LTK++A ++ + IR N V P
Sbjct: 118 PKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP 177
Query: 181 WVIKTSMIKPF 191
+ T ++
Sbjct: 178 GTVDTPSLQER 188
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Score = 130 bits (328), Expect = 4e-38
Identities = 52/195 (26%), Positives = 76/195 (38%), Gaps = 11/195 (5%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
L+TGG G+G A V+ GA V ++ L + G V G V D+ S
Sbjct: 7 AVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELE---TDHGDNVLGIVGDVRSL 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDI-----TAEDMSTVSSTNFESVFHL 116
E +++ + F GK++ LI NA I + V N + H
Sbjct: 64 EDQKQAASRCVARF-GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHA 122
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
+ P AS G+++F S G LY A K A+ L + LA E A +R N
Sbjct: 123 VKACLPALVASR-GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PYVRVN 180
Query: 177 TVAPWVIKTSMIKPF 191
V I + + P
Sbjct: 181 GVGSGGINSDLRGPS 195
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Score = 128 bits (322), Expect = 2e-37
Identities = 58/188 (30%), Positives = 89/188 (47%), Gaps = 2/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TG GIG A GA V N + + E + G + CD++S
Sbjct: 13 CAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE 72
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ L + S GK++IL+NNA KP D+ D N S FHLSQL
Sbjct: 73 QELSALADFAISKL-GKVDILVNNAGGGGPKP-FDMPMADFRRAYELNVFSFFHLSQLVA 130
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P + +G G I+ I+S+ +++ Y + K A + L +N+A + + NIR N +AP
Sbjct: 131 PEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPG 190
Query: 182 VIKTSMIK 189
I T +K
Sbjct: 191 AILTDALK 198
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 127 bits (321), Expect = 3e-37
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 3/189 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
AL TG RGIG EL R GA +V + + + E K G + D+S
Sbjct: 8 VALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK 67
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ L + S F G L+ +++N+ + +++T E V + N F ++Q
Sbjct: 68 PSEVVALFDKAVSHF-GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQG 126
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ G I+ S + GIP+ +LY K A+ + A + + N +AP
Sbjct: 127 LKHCRRGGRI-ILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAP 185
Query: 181 WVIKTSMIK 189
+KT M
Sbjct: 186 GGVKTDMFD 194
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Score = 127 bits (321), Expect = 3e-37
Identities = 42/191 (21%), Positives = 70/191 (36%), Gaps = 8/191 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TA+VT G + L+ G V + + D + F T S
Sbjct: 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDEL------EAFAETYPQLKPMSE 55
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
++ +LIE VTS + G++++L++N A +P ED F L
Sbjct: 56 QEPAELIEAVTSAY-GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 114
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
K +G I+FI+S +S Y + + L L+ E + NI + P
Sbjct: 115 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 174
Query: 181 WVIKTSMIKPF 191
+ + F
Sbjct: 175 NYLHSEDSPYF 185
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 127 bits (321), Expect = 3e-37
Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 5/191 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
+VTG ++GIG LA+ GA V +R++ L + +
Sbjct: 16 KVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMED 75
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
E+ + + G L++LI N + NF S L+ A
Sbjct: 76 MTFAEQFVAQAGKLM-GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAA 134
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKD--NIRTNTV 178
P+ K S GSIV +SS+ G P V+ Y A K A++ ++ E++ N+
Sbjct: 135 LPMLKQSN-GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLC 193
Query: 179 APWVIKTSMIK 189
+I T
Sbjct: 194 VLGLIDTETAM 204
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (321), Expect = 5e-37
Identities = 39/193 (20%), Positives = 72/193 (37%), Gaps = 9/193 (4%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSR------NQIELDARLHEWKNKGFKVTGSVC 56
L+TG + GIG LA + Q L +
Sbjct: 5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQL 64
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
D+ + E VT ++L+ NA + + P + + +++V N +
Sbjct: 65 DVRDSKSVAAARERVTEGRV---DVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRM 121
Query: 117 SQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTN 176
Q P K G+G ++ SVGG+ G+P +Y A K A+ L ++LA + +
Sbjct: 122 LQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLS 181
Query: 177 TVAPWVIKTSMIK 189
+ + T+ ++
Sbjct: 182 LIECGPVHTAFME 194
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 126 bits (317), Expect = 1e-36
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 2/190 (1%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVH-TCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+VTG +RGIG A L + G V +R+ + + + G + D+S
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKE 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E +++T G +++++NNA I + + V N VF +Q A
Sbjct: 64 ADVEAMMKTAID-AWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAAT 122
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+ G I+ I+SV G+ G + Y A K + +K A E A NI N V P
Sbjct: 123 KIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPG 182
Query: 182 VIKTSMIKPF 191
I + M
Sbjct: 183 FIASDMTAKL 192
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 124 bits (313), Expect = 3e-36
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALV+GG RG+G + V + GA V E A E + V D++
Sbjct: 8 VALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYV---HLDVTQP 64
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
Q + ++T + F G L++L+NNA I + D + + N VF +
Sbjct: 65 AQWKAAVDTAVTAF-GGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVV 123
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
K +G GSI+ ISS+ G+ G + Y A K A+ LTK+ A E IR N++ P
Sbjct: 124 KPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPG 183
Query: 182 VIKTSMIK 189
++KT M
Sbjct: 184 LVKTPMTD 191
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Score = 124 bits (311), Expect = 5e-36
Identities = 44/198 (22%), Positives = 67/198 (33%), Gaps = 20/198 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ALVTGG G+G A L G V + +G + D++
Sbjct: 3 SALVTGGASGLGRAAALALKARGYRVVVLDLRR------------EGEDLIYVEGDVTRE 50
Query: 62 EQREKLIETVTSIFQGK--LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E + + ++ A + E V N F++ +L
Sbjct: 51 EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110
Query: 120 AHPLFKA------SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
A + G IV +SV G + Y A KG + LT A E A I
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170
Query: 174 RTNTVAPWVIKTSMIKPF 191
R TVAP + T +++
Sbjct: 171 RVVTVAPGLFDTPLLQGL 188
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Score = 123 bits (310), Expect = 1e-35
Identities = 57/190 (30%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +RGIG A E LA GA V + ++ A G + + +++
Sbjct: 6 IALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGL---MLNVTDP 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
E + G+++IL+NNA I + + E+ + + TN SVF LS+
Sbjct: 63 ASIES-VLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVM 121
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+G I+ I SV G G + Y A K + +K+LA E A I N VAP
Sbjct: 122 RAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPG 181
Query: 182 VIKTSMIKPF 191
I+T M +
Sbjct: 182 FIETDMTRAL 191
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Score = 123 bits (310), Expect = 1e-35
Identities = 63/191 (32%), Positives = 91/191 (47%), Gaps = 4/191 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF--KVTGSVCDLS 59
L+TGG G+G AT LA GA + + L+A +V +V D+S
Sbjct: 6 VVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS 65
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQ 118
Q E + T F G+++ NNA I PT TA + V S N VF +
Sbjct: 66 DEAQVEAYVTATTERF-GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLE 124
Query: 119 LAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTV 178
+ + G+G +V +SVGG+RGI + S Y A K + LT+N A E+ + IR N +
Sbjct: 125 KVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAI 184
Query: 179 APWVIKTSMIK 189
AP I T M++
Sbjct: 185 APGAIWTPMVE 195
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 121 bits (304), Expect = 8e-35
Identities = 45/217 (20%), Positives = 77/217 (35%), Gaps = 25/217 (11%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVH--TCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
+ +VTG RGIG V++L + I H +R+ + K +V ++
Sbjct: 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVT 61
Query: 60 SREQREKLIETVTSIFQGK-LNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLS 117
+ + + V I L++LINNA + + ++ N SV L+
Sbjct: 62 CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121
Query: 118 QLAHPLFKASGNGSIVFISSV------------------GGVRGIPSVSLYGAYKGAMNQ 159
Q PL K + + SV V Y K A+N
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181
Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVLSV 196
+ LA + DN+ P ++T++ L+V
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTV 218
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Score = 121 bits (304), Expect = 1e-34
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 3/190 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSS 60
++TG + G+G + A A V R++ + ++ L E K G + D++
Sbjct: 9 VVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV 68
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
L+++ F GKL+++INNA + + +++ D + V TN F S+ A
Sbjct: 69 ESDVINLVQSAIKEF-GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREA 127
Query: 121 HP-LFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
+ G+++ +SSV P Y A KG M +T+ LA E+A IR N +
Sbjct: 128 IKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187
Query: 180 PWVIKTSMIK 189
P I T +
Sbjct: 188 PGAINTPINA 197
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Score = 122 bits (306), Expect = 1e-34
Identities = 48/188 (25%), Positives = 80/188 (42%), Gaps = 3/188 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSS 60
A +TGG G+G L+ GA SR L A + ++ G KV CD+
Sbjct: 27 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRD 86
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ + + + + G NI+INNAA F+ PT ++ T++ ++
Sbjct: 87 PDMVQNTVSELIKVA-GHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEI 145
Query: 121 HPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
KA + + I+++ G V + K + ++K+LA EW K +R N +
Sbjct: 146 GKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 205
Query: 180 PWVIKTSM 187
P IKT
Sbjct: 206 PGPIKTKG 213
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Score = 120 bits (302), Expect = 1e-34
Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 16/190 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LV +RGIG A + L++ GA V C+RN+ L H + VCDL R
Sbjct: 6 GVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCDL--R 54
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ + L E V +++IL+ NA ++T ED + F ++ + +
Sbjct: 55 KDLDLLFEKV-----KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYL 109
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
P K G G IV I+S + I ++ + + A+ K L+ E A I N VAP
Sbjct: 110 PAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG 169
Query: 182 VIKTSMIKPF 191
+T +K
Sbjct: 170 WTETERVKEL 179
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Score = 121 bits (303), Expect = 1e-34
Identities = 55/192 (28%), Positives = 80/192 (41%), Gaps = 3/192 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW--KNKGFKVTGSVCDLS 59
A+VTG T GIG LA GA + ++ G KV DLS
Sbjct: 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS 65
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E L++ G+++IL+NNA I D E + + N +VFH +
Sbjct: 66 KGEAVRGLVDNAVRQM-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAA 124
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVA 179
A P K G G I+ I+S G+ + S Y A K + TK A E A I N +
Sbjct: 125 ALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAIC 184
Query: 180 PWVIKTSMIKPF 191
P ++T +++
Sbjct: 185 PGWVRTPLVEKQ 196
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Score = 120 bits (302), Expect = 1e-34
Identities = 49/188 (26%), Positives = 79/188 (42%), Gaps = 7/188 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
T LVTG GIG A ++ AR GA + R + L + + + V V D+S
Sbjct: 7 TILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAV---VADVSDP 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ E + F G+L+ + + A +A + ++ E V N F +++
Sbjct: 64 KAVEAVFAEALEEF-GRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVAR--K 120
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
GS+V SV G+ Y A K + L + LA E A+ +R N + P
Sbjct: 121 AGEVLEEGGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNVLLPG 179
Query: 182 VIKTSMIK 189
+I+T M
Sbjct: 180 LIQTPMTA 187
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 117 bits (293), Expect = 3e-33
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 12/191 (6%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ LVTGG RGIG A + LA G V R + G D++
Sbjct: 9 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG-----------LFGVEVDVTDS 57
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+ ++ V + +L++NA ++ + +T E V + N F ++Q A
Sbjct: 58 DAVDRAFTAVEEHQG-PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRAS 116
Query: 122 PLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181
+ + G ++FI SV G+ GI + + Y A K + + +++A E +K N+ N VAP
Sbjct: 117 RSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPG 176
Query: 182 VIKTSMIKPFE 192
I T M + +
Sbjct: 177 YIDTDMTRALD 187
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Score = 114 bits (287), Expect = 3e-32
Identities = 55/192 (28%), Positives = 79/192 (41%), Gaps = 2/192 (1%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
ALVTG +GIG A L + G V N A E G D+S R
Sbjct: 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDR 62
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
+Q +E G ++++NNA +A P IT E + V + N + V Q A
Sbjct: 63 DQVFAAVEQARKTL-GGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAV 121
Query: 122 PL-FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
K G I+ S G G P +++Y + K A+ LT+ A + A I N P
Sbjct: 122 EAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCP 181
Query: 181 WVIKTSMIKPFE 192
++KT M +
Sbjct: 182 GIVKTPMWAEID 193
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Score = 110 bits (276), Expect = 1e-30
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 5/192 (2%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
TAL+TG RGIG A E R GA V N A E G D++ +
Sbjct: 7 TALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQ 63
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAH 121
++ + + + G ++IL+NNAA+ + P V+IT E + + N + Q
Sbjct: 64 ASIDRCVAELLDRW-GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVA 122
Query: 122 PLFKASGNGSIVF-ISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
A G G + ++S G RG V +Y A K A+ LT++ + I N +AP
Sbjct: 123 RAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAP 182
Query: 181 WVIKTSMIKPFE 192
V+ +
Sbjct: 183 GVVDGEHWDGVD 194
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 109 bits (273), Expect = 5e-30
Identities = 46/201 (22%), Positives = 82/201 (40%), Gaps = 15/201 (7%)
Query: 2 TALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVC 56
++TG +RG G A +LAR G+++ +R++ L E + KV +
Sbjct: 8 VCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAA 67
Query: 57 DLSSREQREKLI---ETVTSIFQGKLNILINNAAIAFV---KPTVDITAEDMSTVSSTNF 110
DL + ++L+ + + +LINNAA +++ + N
Sbjct: 68 DLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNL 127
Query: 111 ESVFHLSQLAHPLFKASGNGSIV--FISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEW 168
S+ L+ F+ S S ISS+ ++ LY A K A + L + LA E
Sbjct: 128 TSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEE 187
Query: 169 AKDNIRTNTVAPWVIKTSMIK 189
++R + AP + M +
Sbjct: 188 --PSVRVLSYAPGPLDNDMQQ 206
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Score = 108 bits (270), Expect = 9e-30
Identities = 39/192 (20%), Positives = 72/192 (37%), Gaps = 10/192 (5%)
Query: 2 TALVTGGT--RGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
ALV G T R +G A +L GA V + + L + D++
Sbjct: 10 KALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-RLRPEAEKLAEALGGALLFRADVT 68
Query: 60 SREQREKLIETVTSIFQGKLNILINNA----AIAFVKPTVDITAEDMSTVSSTNFESVFH 115
E+ + L V G L+ L++ A +D +D + S+
Sbjct: 69 QDEELDALFAGVKE-AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVA 127
Query: 116 LSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRT 175
+++ A PL + G IV ++ + +P ++ K A+ + LA E +R
Sbjct: 128 VARRAEPLLREGGG--IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRV 185
Query: 176 NTVAPWVIKTSM 187
N ++ ++T
Sbjct: 186 NAISAGPVRTVA 197
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Score = 106 bits (264), Expect = 8e-29
Identities = 48/215 (22%), Positives = 77/215 (35%), Gaps = 23/215 (10%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVC----- 56
A++TGG R IGH+ L + G V R+ RL N + +C
Sbjct: 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62
Query: 57 -DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST----------- 104
S + E +I+ F G+ ++L+NNA+ + P + + +
Sbjct: 63 LSSSLLDCCEDIIDCSFRAF-GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAE 121
Query: 105 -----VSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159
+ F + S N S+V + +P +Y K A+
Sbjct: 122 LFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGG 181
Query: 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194
LT+ A E A +IR N VAP + P E
Sbjct: 182 LTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQ 216
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Score = 104 bits (260), Expect = 2e-28
Identities = 42/198 (21%), Positives = 68/198 (34%), Gaps = 8/198 (4%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A++TGG G+G AT E L GA +A+ + N V
Sbjct: 7 VAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDV 66
Query: 62 EQREKLIETVTSIF--QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
+ L + + + +K T ED V N F++ +L
Sbjct: 67 QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRL 126
Query: 120 AHPLFKAS------GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
+ G I+ +SV G + Y A KG + +T +A + A I
Sbjct: 127 VAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGI 186
Query: 174 RTNTVAPWVIKTSMIKPF 191
R T+AP + T ++
Sbjct: 187 RVMTIAPGLFGTPLLTSL 204
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 101 bits (252), Expect = 3e-27
Identities = 36/192 (18%), Positives = 66/192 (34%), Gaps = 16/192 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
LV GG +G V+ V + + E + K S
Sbjct: 4 RVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVK----------MTDSFT 53
Query: 62 EQREKLIETVTSIF-QGKLNILINNA-AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
EQ +++ V + K++ ++ A A ++ + + + S L
Sbjct: 54 EQADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHL 113
Query: 120 AHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWA--KDNIRTNT 177
A K G + + + G P + YG KGA++QL ++LA + +
Sbjct: 114 ATKHLK--EGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIA 171
Query: 178 VAPWVIKTSMIK 189
V P + T M +
Sbjct: 172 VLPVTLDTPMNR 183
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Score = 96.9 bits (240), Expect = 3e-25
Identities = 31/193 (16%), Positives = 74/193 (38%), Gaps = 11/193 (5%)
Query: 2 TALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
LVTG I + + + R GA + +N +L R+ E+ + CD++
Sbjct: 7 RILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVA 65
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKP-----TVDITAEDMSTVSSTNFESVF 114
+ + + ++ K + +++ A +T E + S
Sbjct: 66 EDASIDTMFAELGKVWP-KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFV 124
Query: 115 HLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIR 174
+++ + +++ +S +G R IP+ ++ G K ++ + +A + +R
Sbjct: 125 AMAKACRSMLN--PGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVR 182
Query: 175 TNTVAPWVIKTSM 187
N ++ I+T
Sbjct: 183 VNAISAGPIRTLA 195
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Score = 94.9 bits (235), Expect = 9e-25
Identities = 32/191 (16%), Positives = 66/191 (34%), Gaps = 16/191 (8%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
+V GG +G A +E + G V + + + + E
Sbjct: 5 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVD----------GNKNWTE 54
Query: 63 QREKLIETVTSIFQ-GKLNILINN-AAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
Q + ++E S Q +++ + A + ++ + + S ++
Sbjct: 55 QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAK-- 112
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAK--DNIRTNTV 178
G + + + PS+ YG K A++ LT +LA + + DN T+
Sbjct: 113 LATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTI 172
Query: 179 APWVIKTSMIK 189
P + T M +
Sbjct: 173 MPVTLDTPMNR 183
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Score = 94.0 bits (232), Expect = 2e-24
Identities = 40/214 (18%), Positives = 73/214 (34%), Gaps = 20/214 (9%)
Query: 2 TALVTGGTRGIGHATVEELARF---GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58
+ L+TG RG+G V+ L + T RN+ + L + + DL
Sbjct: 4 SILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDL 62
Query: 59 SSREQREKLIETVTSI--FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
+ + +KL+ + + QG + N + ++++ TN L
Sbjct: 63 RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIML 122
Query: 117 SQLAHPLFKASGNGSIVF--------------ISSVGGVRGIPSVSLYGAYKGAMNQLTK 162
++ PL K + + I + Y K A+N TK
Sbjct: 123 AKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATK 182
Query: 163 NLACEWAKDNIRTNTVAPWVIKTSMIKPFEVLSV 196
+L+ + I ++ P +KT M L V
Sbjct: 183 SLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDV 216
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Score = 83.0 bits (204), Expect = 3e-20
Identities = 37/210 (17%), Positives = 69/210 (32%), Gaps = 38/210 (18%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE 62
+++G GIG AT + L G + E+ + DLS+ E
Sbjct: 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLSTAE 46
Query: 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAE--------------------DM 102
R++ I V + ++ L+ A + +
Sbjct: 47 GRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQ 106
Query: 103 STVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL-YGAYKGAMNQLT 161
+ + HL+ +PL A G ++ G +L Y K A+
Sbjct: 107 PAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAV 166
Query: 162 KNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191
+ A W + +R NT+AP +T +++
Sbjct: 167 RKRAAAWGEAGVRLNTIAPGATETPLLQAG 196
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Score = 71.5 bits (174), Expect = 2e-16
Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 15/173 (8%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
A+V GT +G + LA GA V C R + A + V + + +
Sbjct: 25 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK-VNVTAAETADD 83
Query: 62 EQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN-FESVFHLSQLA 120
R + ++ + + AI + SS L
Sbjct: 84 ASRAEAVKGA--------HFVFTAGAIGL----ELLPQAAWQNESSIEIVADYNAQPPLG 131
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNI 173
A+ G G GI + ++ + +L ++ + + I
Sbjct: 132 IGGIDATDKGKEYGGKRAFGALGIGGLK-LKLHRACIAKLFESSEGVFDAEEI 183
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Score = 72.4 bits (176), Expect = 4e-16
Identities = 43/231 (18%), Positives = 75/231 (32%), Gaps = 40/231 (17%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-------------------IELDARLHE 43
ALVTG + +G + E L G V I + A L
Sbjct: 5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN 64
Query: 44 WKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS 103
++ + +L+ + + G+ ++L+NNA+ + P + +
Sbjct: 65 VATAPVSGADGSAPVTLFTRCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHE 123
Query: 104 T------VSSTNFESVFHLSQLAH--------------PLFKASGNGSIVFISSVGGVRG 143
T +F + +A P N SI+ + +
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183
Query: 144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194
+ ++Y KGA+ LT++ A E A IR N V P + P V
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVW 234
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 71.2 bits (173), Expect = 5e-16
Identities = 21/199 (10%), Positives = 57/199 (28%), Gaps = 2/199 (1%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSS 60
M + GGT +G LA G + SR + + +A+ E++ + +
Sbjct: 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60
Query: 61 REQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLA 120
+ + ++ + I K V + S +++
Sbjct: 61 AAEACDIAVLTIPWEHA-IDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIV 119
Query: 121 HPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAP 180
+ ++ S + + + + +K + + +
Sbjct: 120 AEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDA 179
Query: 181 WVIKTS-MIKPFEVLSVGI 198
+ S +++ L + I
Sbjct: 180 GPLSNSRLVESLTPLILNI 198
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Score = 69.7 bits (169), Expect = 4e-15
Identities = 34/190 (17%), Positives = 68/190 (35%), Gaps = 6/190 (3%)
Query: 2 TALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
L+ G + I + + GA + N+ L+ R+ + D+S
Sbjct: 7 KGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-SLEKRVRPIAQELNSPYVYELDVS 65
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQL 119
E + L +V G L+ ++++ A A + E + +T E +
Sbjct: 66 KEEHFKSLYNSVKK-DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIE 124
Query: 120 AHPLFKASGNGSIVFISSV--GGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
K N ++ G + + ++ G K A+ + LA + K +IR N
Sbjct: 125 LTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNA 184
Query: 178 VAPWVIKTSM 187
++ I+T
Sbjct: 185 LSAGPIRTLA 194
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Score = 64.6 bits (156), Expect = 2e-13
Identities = 45/191 (23%), Positives = 72/191 (37%), Gaps = 14/191 (7%)
Query: 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDA---RLHEWKNKGFKVTGSVCD 57
T LVTGGT G+G LAR GA + SR+ + D + E + G + T + CD
Sbjct: 11 TVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACD 70
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
++ RE +L+ + + + + AA +T E + S +L
Sbjct: 71 VTDRESVRELLGGIGDDVPL--SAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+L L + V SS G P + Y ++ LA + D +
Sbjct: 129 ELTREL----DLTAFVLFSSFASAFGAPGLGGYAPGNAYLD----GLAQQRRSDGLPATA 180
Query: 178 VAPWVIKTSMI 188
VA S +
Sbjct: 181 VAWGTWAGSGM 191
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Score = 55.2 bits (131), Expect = 5e-10
Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 4/192 (2%)
Query: 2 TALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLS 59
LV+G I GA + +++ L R+ + +
Sbjct: 8 RILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNE 67
Query: 60 SREQREKLIETVTSIFQGKLNILINNAAIA--FVKPTVDITAEDMSTVSSTNFESVFHLS 117
T KL+ ++++ + VS S + +
Sbjct: 68 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYA 127
Query: 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNT 177
+A L G + R +P+ + K A+ + + +A E K +R+N
Sbjct: 128 SMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVRSNL 187
Query: 178 VAPWVIKTSMIK 189
VA I+T +
Sbjct: 188 VAAGPIRTLAMS 199
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 46.3 bits (109), Expect = 6e-07
Identities = 32/180 (17%), Positives = 51/180 (28%), Gaps = 27/180 (15%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSR-----NQIELDARLHEWKNKGFKVTGSVC 56
AL+TG T G E L G VH R N +D + K
Sbjct: 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
DLS +++ + + + + N A++ V + + + L
Sbjct: 63 DLSDTSNLTRILR------EVQPDEVYNLGAMSHVAVSFESPEYTA----DVDAMGTLRL 112
Query: 117 SQLAHPLFKASGNGSIVFISSV---GGVRGIP--------SVSLYGAYKGAMNQLTKNLA 165
+ S+ G V+ IP S Y K +T N
Sbjct: 113 LEAIR-FLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYR 171
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 44.4 bits (104), Expect = 3e-06
Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 41/194 (21%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN---QIELDARLHEWKNKGFKVTGSVCD 57
M L+TGG IG A V + + L++ ++ + D
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFE--HAD 58
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117
+ + ++ E Q + + +++ AA + V ++ A + TN + L
Sbjct: 59 ICDSAEITRIFE------QYQPDAVMHLAAESHVDRSITGPAAFI----ETNIVGTYALL 108
Query: 118 QLAH-----PLFKASGNGSIVFISSV---GGVRGIPSV------------------SLYG 151
++A N IS+ G + V S Y
Sbjct: 109 EVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYS 168
Query: 152 AYKGAMNQLTKNLA 165
A K + + L +
Sbjct: 169 ASKASSDHLVRAWR 182
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Score = 43.6 bits (101), Expect = 5e-06
Identities = 10/49 (20%), Positives = 15/49 (30%), Gaps = 2/49 (4%)
Query: 2 TALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG 48
A + G G G A + LA GA + + + K
Sbjct: 10 RAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKF 58
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Score = 42.6 bits (98), Expect = 1e-05
Identities = 32/222 (14%), Positives = 68/222 (30%), Gaps = 39/222 (17%)
Query: 3 ALVTG--GTRGIGHATVEELARFGAIVHTCSRNQI-----------ELDARLHEWKNKGF 49
+ G T G G +EL++ + + + D + K+K
Sbjct: 5 CFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKM 64
Query: 50 KVTGSV---------------------CDLSSREQREKLIETVTSIFQGKLNILINNAAI 88
+ + ++ E + + + GK+N+L+++ A
Sbjct: 65 NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLAN 123
Query: 89 AFV--KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPS 146
A K ++ + + S + S+ L + + I
Sbjct: 124 AKEVQKDLLNTSRKGYLDALSKSSYSLISLCK-YFVNIMKPQSSIISLTYHASQKVVPGY 182
Query: 147 VSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVIKTSM 187
+ K A+ T+ LA NIR NT++ +K+
Sbjct: 183 GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA 224
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 40.7 bits (94), Expect = 5e-05
Identities = 19/107 (17%), Positives = 37/107 (34%), Gaps = 11/107 (10%)
Query: 1 MTALVTGGTRGIGHATVEELARFGAIVHTC---SRNQIELDARLHEWKNKGFKVTGSVCD 57
M LVTGG+ IG T +L + G V ++ + + K D
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFV--EGD 58
Query: 58 LSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMST 104
+ + +++ ++ +I+ A + V +V E
Sbjct: 59 IRNEALMTEILH------DHAIDTVIHFAGLKAVGESVQKPLEYYDN 99
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.6 bits (91), Expect = 1e-04
Identities = 33/180 (18%), Positives = 47/180 (26%), Gaps = 28/180 (15%)
Query: 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHE------WKNKGFKVTGSVC 56
AL+TG T G E L G VH R + E + +
Sbjct: 4 ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYG 63
Query: 57 DLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHL 116
DL+ K+I I A V I+ + + + L
Sbjct: 64 DLTDSTCLVKIINE-----VKPTEIYNLGAQSH-----VKISFDLAEYTADVDGVGTLRL 113
Query: 117 SQLAHPLFKASGNGSIVFISS---VGGVRGIPS--------VSLYGAYKGAMNQLTKNLA 165
+ S+ G V+ IP S YGA K + N
Sbjct: 114 LDAVK-TCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFR 172
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 39.0 bits (89), Expect = 2e-04
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKGFKVTGSVCDLS 59
LVTG + VE+L G V +R+ +L + + K G T V D+
Sbjct: 13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72
Query: 60 SR 61
+
Sbjct: 73 KQ 74
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 37.5 bits (85), Expect = 6e-04
Identities = 13/61 (21%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFK-VTGSVCDLS 59
VTG T G L GA V S + + + G + G + D +
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN 69
Query: 60 S 60
Sbjct: 70 K 70
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 35.9 bits (81), Expect = 0.002
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 4/52 (7%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD----ARLHEWKNKGFKV 51
L+ GGT IG V G + R ++ + L +K G K+
Sbjct: 7 LIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL 58
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.8 bits (82), Expect = 0.002
Identities = 26/178 (14%), Positives = 47/178 (26%), Gaps = 39/178 (21%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ 63
L+TGG +G ++L G V + W +L + +
Sbjct: 5 LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGH------ENFELINHDV 58
Query: 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL 123
E L V I+ + A+ A + + + TN ++ LA
Sbjct: 59 VEPLYIEVDQIY--------HLASPASPPNYMYNPIKTL----KTNTIGTLNMLGLAK-- 104
Query: 124 FKASGNGSIVFISS----------------VGGVRGIPSVSLYGAYKGAMNQLTKNLA 165
++ S+ G V I + Y K +
Sbjct: 105 ---RVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYM 159
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 35.5 bits (80), Expect = 0.002
Identities = 11/53 (20%), Positives = 15/53 (28%), Gaps = 5/53 (9%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRN-----QIELDARLHEWKNKGFKV 51
L+ G T IG + G R E L +K G +
Sbjct: 7 LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANI 59
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 35.4 bits (80), Expect = 0.003
Identities = 12/65 (18%), Positives = 20/65 (30%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSR 61
+ALVTG T G + L G VH + + D++
Sbjct: 2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61
Query: 62 EQREK 66
++
Sbjct: 62 CSVQR 66
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 35.0 bits (79), Expect = 0.003
Identities = 7/30 (23%), Positives = 12/30 (40%)
Query: 4 LVTGGTRGIGHATVEELARFGAIVHTCSRN 33
+ G T G T+ + + G V R+
Sbjct: 7 AIFGATGQTGLTTLAQAVQAGYEVTVLVRD 36
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 35.4 bits (80), Expect = 0.003
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRN 33
T V G T G + + A G V +
Sbjct: 5 TIAVVGATGRQGASLIRVAAAVGHHVRAQVHS 36
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 35.0 bits (79), Expect = 0.004
Identities = 17/76 (22%), Positives = 23/76 (30%), Gaps = 10/76 (13%)
Query: 2 TALVTGGTRGIGHATVEELARFGAIVHTCSR--------NQIELDARLHEWKNKGFKVTG 53
AL+TG T G E L G VH R + H K+
Sbjct: 3 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKL-- 60
Query: 54 SVCDLSSREQREKLIE 69
DL+ + I+
Sbjct: 61 HYADLTDASSLRRWID 76
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 202 | |||
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 100.0 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 100.0 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 100.0 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 100.0 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 100.0 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 100.0 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 100.0 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 100.0 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 100.0 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 100.0 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 100.0 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 100.0 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 100.0 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 100.0 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 100.0 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 100.0 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 100.0 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 100.0 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 100.0 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 100.0 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 100.0 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 100.0 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 100.0 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 100.0 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 100.0 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 100.0 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 100.0 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 100.0 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 100.0 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 100.0 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 100.0 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 100.0 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 100.0 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 100.0 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 100.0 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 100.0 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 100.0 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 100.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 100.0 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 100.0 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 100.0 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 100.0 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 100.0 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 100.0 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 100.0 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 100.0 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 100.0 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 100.0 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 100.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 100.0 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 100.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 100.0 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 100.0 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 100.0 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 100.0 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 100.0 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 100.0 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 100.0 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 100.0 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 100.0 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 100.0 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 100.0 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.97 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.87 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.84 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.81 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.8 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.8 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.79 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.78 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.78 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.77 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.77 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.76 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.75 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.75 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.75 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.73 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.72 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.7 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.7 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.7 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.7 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.68 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.68 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.57 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.56 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.43 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.41 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.4 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.31 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 99.29 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.26 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.24 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.21 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.28 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 98.2 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.19 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 98.15 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 98.12 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 98.07 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 98.04 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 98.03 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 98.02 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.99 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.97 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.93 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.9 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.89 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.87 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 97.85 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.81 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.79 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 97.72 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.7 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 97.68 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 97.67 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.67 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 97.66 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.56 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.54 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.53 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.49 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.46 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 97.46 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.43 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.42 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.41 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.4 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.37 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.37 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 97.37 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 97.35 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 97.34 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.34 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.31 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.31 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.29 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 97.27 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.21 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 97.21 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.19 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.19 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.19 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.12 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.12 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 97.09 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 97.06 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.06 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.05 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 97.04 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 97.02 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.0 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.99 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 96.97 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 96.9 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.89 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.88 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 96.88 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 96.7 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.66 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.63 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 96.62 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.57 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 96.54 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 96.54 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.5 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.49 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.49 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 96.47 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.43 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.4 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.39 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 96.32 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.27 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.26 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.23 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.2 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.18 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.16 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.13 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.13 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.11 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 96.05 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.0 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 95.99 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 95.99 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 95.87 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 95.73 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 95.69 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.64 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.63 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.6 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 95.54 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 95.49 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.45 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 95.29 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.12 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.07 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 94.94 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 94.84 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 94.8 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 94.61 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 94.56 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 94.56 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.5 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.5 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.49 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 94.49 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 94.37 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 94.31 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 94.25 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.17 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 94.14 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 94.09 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 93.96 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 93.9 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 93.87 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.84 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.81 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.8 | |
| d1wy7a1 | 201 | Hypothetical protein PH1948 {Archaeon Pyrococcus h | 93.75 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 93.54 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 93.45 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.43 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 93.41 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 93.32 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 93.29 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 93.26 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.25 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 93.25 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 93.19 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 93.16 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 93.05 | |
| d1u0sy_ | 118 | CheY protein {Thermotoga maritima [TaxId: 2336]} | 92.86 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 92.63 | |
| d1byia_ | 224 | Dethiobiotin synthetase {Escherichia coli [TaxId: | 92.49 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 92.35 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 92.33 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 92.24 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 92.23 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 92.2 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 92.2 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 92.14 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 91.95 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 91.75 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 91.63 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.6 | |
| d2fr1a2 | 209 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 91.59 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 91.52 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 91.44 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 91.32 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 91.17 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 91.13 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 91.12 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 91.03 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 90.93 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 90.92 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 90.79 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 90.75 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 90.74 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 90.74 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 90.68 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 90.57 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.26 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 90.21 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 90.14 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 90.07 | |
| d2fhpa1 | 182 | Putative methylase EF2452 {Enterococcus faecalis [ | 90.01 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 90.0 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 89.71 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 89.53 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 89.38 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 89.35 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 89.22 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 89.18 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 89.14 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 89.1 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 89.08 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 89.07 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 88.77 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 88.74 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.71 | |
| d2b3ta1 | 274 | N5-glutamine methyltransferase, HemK {Escherichia | 88.43 | |
| d1ihua2 | 279 | Arsenite-translocating ATPase ArsA {Escherichia co | 88.1 | |
| d1hyqa_ | 232 | Cell division regulator MinD {Archaeon Archaeoglob | 87.99 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 87.95 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 87.77 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 87.72 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 87.71 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 87.64 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 87.48 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 87.48 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 87.24 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 87.22 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 87.04 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 87.03 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 86.99 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 86.84 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 86.76 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 86.64 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 86.49 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 86.43 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 86.37 | |
| d1v71a1 | 318 | Hypothetical protein C320.14 (SPCC320.14, SPCC330. | 86.06 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 86.01 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 86.0 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 85.78 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 85.76 | |
| d1g3qa_ | 237 | Cell division regulator MinD {Archaeon Pyrococcus | 85.68 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 85.68 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 85.46 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 85.39 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 85.03 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 85.02 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 84.99 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 84.99 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 84.95 | |
| d1a9xa2 | 138 | Carbamoyl phosphate synthetase, large subunit allo | 84.85 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 84.82 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 84.62 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 84.62 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 84.5 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 84.46 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 84.37 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 84.34 | |
| d1cp2a_ | 269 | Nitrogenase iron protein {Clostridium pasteurianum | 84.2 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 84.08 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 83.95 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 83.94 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 83.91 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 83.82 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 83.76 | |
| d1h9aa1 | 195 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 83.67 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 83.46 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 83.44 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 83.15 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 82.8 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 82.64 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 82.49 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 82.3 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 82.24 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 82.24 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 82.16 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 81.98 | |
| d1ydhb_ | 181 | Hypothetical protein At5g11950 {Thale cress (Arabi | 81.98 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 81.91 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 81.87 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 81.79 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 81.78 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 81.38 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 81.37 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 80.4 |
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=100.00 E-value=2.4e-49 Score=304.35 Aligned_cols=192 Identities=26% Similarity=0.355 Sum_probs=184.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCE-------EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAI-------VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~-------Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
++|||||++|||+++|++|+++|++ |++++|++++++++.+++.+.+.++.++.+|++|+++++++++++.++
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999999997 999999999999999999888889999999999999999999999999
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
| +++|++|||||.....++.+.+.++|++++++|+.|++.++|+++|+|++++.|+||++||.++..+.|+.+.|++||
T Consensus 83 ~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK 161 (240)
T d2bd0a1 83 Y-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSK 161 (240)
T ss_dssp T-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred c-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHH
Confidence 9 799999999999988999999999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhhh
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~ 194 (202)
+|+.+|+|+|+.|++++|||||+|+||+|+|+|.....+.
T Consensus 162 ~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~ 201 (240)
T d2bd0a1 162 FGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE 201 (240)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST
T ss_pred HHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh
Confidence 9999999999999999999999999999999998765544
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=2.8e-49 Score=305.98 Aligned_cols=192 Identities=30% Similarity=0.389 Sum_probs=180.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.++..+.+|++|+++++++++++.+++ ++||
T Consensus 11 KvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g~iD 89 (251)
T d2c07a1 11 KVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH-KNVD 89 (251)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc-CCce
Confidence 799999999999999999999999999999999999999999998888899999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||.++..+.++..+|++||+|+.+|
T Consensus 90 ilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~l 169 (251)
T d2c07a1 90 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGF 169 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHH
T ss_pred eeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHHH
Confidence 99999999988899999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+|+++.|++++|||||+|+||+|+|+|....++
T Consensus 170 tr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~ 202 (251)
T d2c07a1 170 TKSLAKELASRNITVNAIAPGFISSDMTDKISE 202 (251)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCC-----CCH
T ss_pred HHHHHHHhhhhCeEEEEEccCCEecccccccCH
Confidence 999999999999999999999999999876543
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=100.00 E-value=3.1e-49 Score=306.86 Aligned_cols=192 Identities=31% Similarity=0.465 Sum_probs=182.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++.+|++|+++++++++++.++| ++||
T Consensus 3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iD 81 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPVD 81 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence 799999999999999999999999999999999999999999999888899999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHH--HhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPL--FKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
++|||||+....++.+.+.++|++++++|+.|+++++|+++|+ |.+++.|+||+++|..+..+.|+..+|++||+|+.
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~ 161 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVV 161 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHH
Confidence 9999999998889999999999999999999999999999997 45566789999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+|+|+|+.|++++|||||+|+||+|+|||.....+
T Consensus 162 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~ 196 (257)
T d2rhca1 162 GFTKALGLELARTGITVNAVCPGFVETPMAASVRE 196 (257)
T ss_dssp HHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHH
T ss_pred HHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHh
Confidence 99999999999999999999999999999865543
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=100.00 E-value=5e-49 Score=305.32 Aligned_cols=192 Identities=29% Similarity=0.344 Sum_probs=182.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++.+|++|+++++++++++.++| ++||
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 80 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFD 80 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence 678999999999999999999999999999999999999999999888899999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||+....++.+.+.++|++++++|+.|+++++|+++|+|.++ +.++|+++||.++..+.|+.+.|++||+|+.+
T Consensus 81 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 160 (255)
T d1gega_ 81 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 160 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence 99999999988899999999999999999999999999999987655 46889999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
|+|+|+.|+++.|||||+|+||+++|||..+..+
T Consensus 161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~ 194 (255)
T d1gega_ 161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDR 194 (255)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHH
T ss_pred hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhh
Confidence 9999999999999999999999999999865543
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=100.00 E-value=9.1e-49 Score=304.35 Aligned_cols=191 Identities=59% Similarity=0.888 Sum_probs=184.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++.+|++|+++++++++++.+++++++|
T Consensus 9 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~id 88 (259)
T d2ae2a_ 9 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN 88 (259)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCce
Confidence 79999999999999999999999999999999999999999999988889999999999999999999999999856899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+....++.+.+.++|++++++|+.+++.++|+++|+|.+++.|+||++||..+..+.|+...|+++|+++.+|
T Consensus 89 ilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l 168 (259)
T d2ae2a_ 89 ILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQL 168 (259)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHHHH
Confidence 99999999988899999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+++.|++++|||||+|+||+|+|+|.+..
T Consensus 169 t~~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 199 (259)
T d2ae2a_ 169 TRCLAFEWAKDNIRVNGVGPGVIATSLVEMT 199 (259)
T ss_dssp HHHHHHHTGGGTEEEEEEEECSBCSHHHHHH
T ss_pred HHHHHHHhCcCceEEEEeeeCcccCHHHHhh
Confidence 9999999999999999999999999987644
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.8e-48 Score=299.90 Aligned_cols=190 Identities=29% Similarity=0.330 Sum_probs=180.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++.+.+++. .++.++.+|++|+++++++++++.+++ +++|
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id 82 (244)
T d1nffa_ 7 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDTAVTAF-GGLH 82 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---CcceEEEeecCCHHHHHHHHHHHHHHh-CCCe
Confidence 799999999999999999999999999999999999988887764 468889999999999999999999999 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.+++.++|.+.|+|.+++.|+||++||.++..+.++...|+++|+++.+|
T Consensus 83 ilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l 162 (244)
T d1nffa_ 83 VLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGL 162 (244)
T ss_dssp EEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHH
Confidence 99999999988999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~ 194 (202)
+|+++.|++++|||||+|+||+|+|||....++.
T Consensus 163 tk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~ 196 (244)
T d1nffa_ 163 TKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED 196 (244)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT
T ss_pred HHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH
Confidence 9999999999999999999999999998765543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.6e-48 Score=302.93 Aligned_cols=192 Identities=60% Similarity=0.936 Sum_probs=163.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+.+.++..+.+|++++++++++++++.++|++++|
T Consensus 9 K~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id 88 (259)
T d1xq1a_ 9 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLD 88 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcc
Confidence 79999999999999999999999999999999999999999999888889999999999999999999999999867899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.|++.++|+++|+|++++.|+||++||..+..+.++...|+++|+|+.+|
T Consensus 89 ilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 168 (259)
T d1xq1a_ 89 ILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQL 168 (259)
T ss_dssp EEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHH
T ss_pred cccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchhhh
Confidence 99999999988899999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+++.|++++|||||+|+||+|+|||.....
T Consensus 169 t~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~ 200 (259)
T d1xq1a_ 169 ARNLACEWASDGIRANAVAPAVIATPLAEAVY 200 (259)
T ss_dssp HHHHHHHHGGGTCEEEEEECCSCC--------
T ss_pred hHHHHHHhcccCeEEEEeccCcccCHHhhhhc
Confidence 99999999999999999999999999987544
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=5.2e-49 Score=303.20 Aligned_cols=193 Identities=25% Similarity=0.309 Sum_probs=182.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEE-eCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTC-SRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~-~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
+++|||||++|||+++|++|+++|++|++. .|+++.++.+.++++..+.++.++.+|++|+++++++++++.+++ +++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 80 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTI 80 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCC
Confidence 579999999999999999999999999986 567778888888888888899999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|++|||||.....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.++...|++||+|+.+
T Consensus 81 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ 160 (244)
T d1edoa_ 81 DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG 160 (244)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred CccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence 99999999998899999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchhhh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~ 194 (202)
|+|+|+.|++++|||||+|+||+++|+|.....+.
T Consensus 161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~ 195 (244)
T d1edoa_ 161 FSKTAAREGASRNINVNVVCPGFIASDMTAKLGED 195 (244)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHH
T ss_pred ChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHH
Confidence 99999999999999999999999999998765443
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=100.00 E-value=1.6e-48 Score=303.25 Aligned_cols=192 Identities=29% Similarity=0.353 Sum_probs=174.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|+ .+.++++.+++.+. +.++.++.+|++|+++++++++++.+++ ++
T Consensus 5 K~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~ 83 (260)
T d1x1ta1 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM-GR 83 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh-CC
Confidence 799999999999999999999999999999997 46677777777544 6789999999999999999999999999 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
||++|||||+....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||.++..+.|+..+|++||+|+.
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~ 163 (260)
T d1x1ta1 84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVV 163 (260)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhHH
Confidence 99999999999888999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+|+|+++.|++++|||||+|+||+|+|||......
T Consensus 164 ~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~ 198 (260)
T d1x1ta1 164 GFTKVTALETAGQGITANAICPGWVRTPLVEKQIS 198 (260)
T ss_dssp HHHHHHHHHHTTTTEEEEEEEECCBCC--------
T ss_pred HhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhh
Confidence 99999999999999999999999999999865543
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.7e-48 Score=302.18 Aligned_cols=189 Identities=31% Similarity=0.418 Sum_probs=181.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++.++.+|++++++++++++++.+++ ++||
T Consensus 12 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g~iD 90 (255)
T d1fmca_ 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-GKVD 90 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence 799999999999999999999999999999999999999999999888899999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+....++ +.+.++|++++++|+.|++.++|+++|+|.+++.++||++||.++..+.|+..+|++||+|+.+|
T Consensus 91 ilvnnAG~~~~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~l 169 (255)
T d1fmca_ 91 ILVNNAGGGGPKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHL 169 (255)
T ss_dssp EEEECCCCCCCCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHH
T ss_pred EeeeCCcCCCCCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHH
Confidence 99999998876665 78999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+++.|++++|||||+|+||+|+|++....
T Consensus 170 t~~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 200 (255)
T d1fmca_ 170 VRNMAFDLGEKNIRVNGIAPGAILTDALKSV 200 (255)
T ss_dssp HHHHHHHHHTTTEEEEEEEECSBCSHHHHTT
T ss_pred HHHHHHHhCccCeEEEEeeeCcCcChHhhcc
Confidence 9999999999999999999999999987644
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.2e-48 Score=299.24 Aligned_cols=191 Identities=34% Similarity=0.496 Sum_probs=179.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+. +.++.++.+|++|+++++++++++.+++ ++|
T Consensus 6 K~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 84 (251)
T d1vl8a_ 6 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF-GKL 84 (251)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc-CCC
Confidence 79999999999999999999999999999999999999988887544 7789999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCC-ccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGG-VRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~-~~~~~~~~~y~asK~a~~ 158 (202)
|++|||||+....++.+.+.++|++.+++|+.+++.++|.++|+|++++.|+||+++|..+ ..+.++..+|+++|+|+.
T Consensus 85 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~ 164 (251)
T d1vl8a_ 85 DTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVA 164 (251)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhHH
Confidence 9999999998888999999999999999999999999999999999988899999999766 457788999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+|+|+.|++++|||||+|+||+|+|+|.....
T Consensus 165 ~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~ 198 (251)
T d1vl8a_ 165 SLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVF 198 (251)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHH
T ss_pred HHHHHHHHHhcccCeEEEEEeeCcccCHHHHhcc
Confidence 9999999999999999999999999999987543
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=8.6e-49 Score=301.78 Aligned_cols=189 Identities=31% Similarity=0.386 Sum_probs=179.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+...+.+|++|+++++++++++.+++ ++||
T Consensus 5 K~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 80 (243)
T d1q7ba_ 5 KIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG---ANGKGLMLNVTDPASIESVLEKIRAEF-GEVD 80 (243)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG---GGEEEEECCTTCHHHHHHHHHHHHHHT-CSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC---CCCcEEEEEecCHHHhhhhhhhhhccc-CCcc
Confidence 799999999999999999999999999999999999998888774 367889999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||.++..+.++.++|++||+|+.+|
T Consensus 81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~l 160 (243)
T d1q7ba_ 81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGF 160 (243)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHH
T ss_pred eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHH
Confidence 99999999988999999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+|+++.|++++|||||+|+||+++|+|.+...+
T Consensus 161 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~ 193 (243)
T d1q7ba_ 161 SKSLAREVASRGITVNVVAPGFIETDMTRALSD 193 (243)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCH
T ss_pred HHHHHHHhCccCeEEEEEecceEechhhhhhhh
Confidence 999999999999999999999999998765443
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=100.00 E-value=3e-48 Score=299.49 Aligned_cols=189 Identities=29% Similarity=0.357 Sum_probs=170.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++ ...+.+++.+.++.++.+|++|+++++++++++.++| ++||
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-G~iD 82 (247)
T d2ew8a1 6 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRCD 82 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-CCCC
Confidence 799999999999999999999999999999998753 2334455667889999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++.+++|+.++++++|+++|+|++++.|+||++||.++..+.|+...|++||+|+.+|
T Consensus 83 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 162 (247)
T d2ew8a1 83 ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGF 162 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHH
Confidence 99999999988899999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+|+.|+++.|||||+|+||+|+|+|.....
T Consensus 163 tk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~ 194 (247)
T d2ew8a1 163 TRALASDLGKDGITVNAIAPSLVRTATTEASA 194 (247)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCC---------
T ss_pred HHHHHHHhcccCeEEEEEeeCCCCCccccccc
Confidence 99999999999999999999999999986543
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=100.00 E-value=1.5e-48 Score=303.28 Aligned_cols=190 Identities=30% Similarity=0.431 Sum_probs=181.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++..+.+|++|+++++++++++.+++ +++|
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 84 (260)
T d1zema1 6 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-GKID 84 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-CCCC
Confidence 799999999999999999999999999999999999999999998888899999999999999999999999999 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||... ..++.+.+.++|+.++++|+.++++++|+++|+|.+++.|+||++||.++..+.|+..+|++||+|+.+
T Consensus 85 ilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~ 164 (260)
T d1zema1 85 FLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIA 164 (260)
T ss_dssp EEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHH
T ss_pred eehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHHH
Confidence 9999999864 478899999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
|+|+++.|++++|||||+|+||+|+|+|..+.
T Consensus 165 ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~ 196 (260)
T d1zema1 165 LTETAALDLAPYNIRVNAISPGYMGPGFMWER 196 (260)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBCSSHHHHH
T ss_pred HHHHHHHHhhhhCCEEEEeccCcccCcchhhc
Confidence 99999999999999999999999999987543
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=100.00 E-value=3.5e-48 Score=300.83 Aligned_cols=191 Identities=33% Similarity=0.430 Sum_probs=179.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++... +.++..+.+|++|+++++++++++.+++ ++
T Consensus 5 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G~ 83 (258)
T d1iy8a_ 5 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF-GR 83 (258)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh-CC
Confidence 89999999999999999999999999999999999999988887654 4578999999999999999999999999 79
Q ss_pred ccEEEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHH
Q 028868 79 LNILINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAM 157 (202)
Q Consensus 79 id~vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~ 157 (202)
||++|||||+. ...++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||++||.++..+.|+...|++||+|+
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal 163 (258)
T d1iy8a_ 84 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGV 163 (258)
T ss_dssp CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHH
T ss_pred CCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHHH
Confidence 99999999976 45678899999999999999999999999999999988899999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
.+|+|+|+.|++++|||||+|+||+|+|||.....
T Consensus 164 ~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~ 198 (258)
T d1iy8a_ 164 VGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM 198 (258)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHH
T ss_pred HHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHH
Confidence 99999999999999999999999999999976543
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=100.00 E-value=3.3e-48 Score=300.05 Aligned_cols=190 Identities=30% Similarity=0.349 Sum_probs=179.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +.++.++.+|++++++++++++++.+++ ++||
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 81 (254)
T d1hdca_ 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD 81 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHc-CCcc
Confidence 79999999999999999999999999999999998888877665 4578999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||.++..+.++.+.|++||+|+.+|
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~l 161 (254)
T d1hdca_ 82 GLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGL 161 (254)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHH
Confidence 99999999988899999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~ 194 (202)
+|+|+.|++++|||||+|+||+|+|+|..+..+.
T Consensus 162 t~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~ 195 (254)
T d1hdca_ 162 SKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR 195 (254)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC
T ss_pred HHHHHHHhCCCceEEEEeeeCcccCccchhcCHH
Confidence 9999999999999999999999999998755443
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.2e-48 Score=297.31 Aligned_cols=192 Identities=25% Similarity=0.322 Sum_probs=183.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+.++..+.+|++|+++++++++++.+++ +++|
T Consensus 8 kv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~-g~id 86 (244)
T d1yb1a_ 8 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI-GDVS 86 (244)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc-CCCc
Confidence 789999999999999999999999999999999999999999999888899999999999999999999999998 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.|++++++.++|+|.+++.|+||++||.++..+.|+++.|++||+|+.+|
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~ 166 (244)
T d1yb1a_ 87 ILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGF 166 (244)
T ss_dssp EEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHH
T ss_pred eeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHHHH
Confidence 99999999988899999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred HHHHHHHHcc---CCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAK---DNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~---~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+++|+.|+++ +||+|++|+||+|+|+|.+....
T Consensus 167 ~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~~ 202 (244)
T d1yb1a_ 167 HKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPST 202 (244)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTHH
T ss_pred HHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcCc
Confidence 9999999875 58999999999999999876444
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=100.00 E-value=1.8e-47 Score=297.18 Aligned_cols=190 Identities=27% Similarity=0.352 Sum_probs=179.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh-hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ-IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~-~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+. +.++.+.+++.+.+.++..+.+|++|+++++++++++.+++ ++|
T Consensus 8 K~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-G~i 86 (261)
T d1geea_ 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-GKL 86 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-CCC
Confidence 7999999999999999999999999999999985 46778888888888899999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC-CeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++|||||+....++.+.+.++|++++++|+.|++.++|+++|+|.+++. ++|+++||.++..+.|+..+|++||+|+.
T Consensus 87 DiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal~ 166 (261)
T d1geea_ 87 DVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMK 166 (261)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccch
Confidence 99999999998889999999999999999999999999999999987764 56999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+|+|+.|++++|||||+|+||+|+|||....
T Consensus 167 ~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~ 199 (261)
T d1geea_ 167 LMTETLALEYAPKGIRVNNIGPGAINTPINAEK 199 (261)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHH
T ss_pred hhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhh
Confidence 999999999999999999999999999998654
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=2.4e-47 Score=294.42 Aligned_cols=184 Identities=32% Similarity=0.433 Sum_probs=171.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++..+ ..+++ +..++++|++|+++++++++++.+++ ++||
T Consensus 6 K~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD 78 (248)
T d2d1ya1 6 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI-----GGAFFQVDLEDERERVRFVEEAAYAL-GRVD 78 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH-----TCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc-----CCeEEEEeCCCHHHHHHHHHHHHHhc-CCCC
Confidence 89999999999999999999999999999999987643 33333 24567899999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.|+++++|+++|+|++++.|+||+++|.++..+.|+...|+++|+|+.+|
T Consensus 79 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~l 158 (248)
T d2d1ya1 79 VLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNL 158 (248)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHH
T ss_pred eEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHH
Confidence 99999999988999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+++.|++++|||||+|+||+++||+..+.
T Consensus 159 tk~lA~el~~~gIrVN~I~PG~v~T~~~~~~ 189 (248)
T d2d1ya1 159 TRSLALDLAPLRIRVNAVAPGAIATEAVLEA 189 (248)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHHH
T ss_pred HHHHHHHhhhhCcEEEEEeeCCCCCchHHHH
Confidence 9999999999999999999999999987654
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=100.00 E-value=3.5e-47 Score=294.12 Aligned_cols=190 Identities=29% Similarity=0.387 Sum_probs=178.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. +.++.++.+|++|+++++++++++.+++ ++||
T Consensus 7 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~iD 84 (251)
T d1zk4a1 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAF-GPVS 84 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHh-CCce
Confidence 7999999999999999999999999999999999999998888754 5579999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCC-CeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGN-GSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++|++++++|+.++++++|+++|+|.+++. ++||++||.++..+.|+...|++||+++.+
T Consensus 85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~ 164 (251)
T d1zk4a1 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRI 164 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhc
Confidence 9999999998899999999999999999999999999999999988764 589999999999999999999999999999
Q ss_pred HHHHHHHH--HccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACE--WAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e--~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+|+++.| +.+.|||||+|+||+|+|+|....+
T Consensus 165 lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~ 199 (251)
T d1zk4a1 165 MSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP 199 (251)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST
T ss_pred chHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC
Confidence 99999999 4688999999999999999986554
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=100.00 E-value=3.8e-47 Score=294.78 Aligned_cols=188 Identities=28% Similarity=0.375 Sum_probs=176.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++.++.+|++|+++++++++++.+++ ++||
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g~iD 81 (256)
T d1k2wa_ 6 KTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW-GSID 81 (256)
T ss_dssp EEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh-CCcc
Confidence 78999999999999999999999999999999999998888776 5578999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++|++.+++|+.|++.++|+++|.|.+ ++.|+||++||.++..+.|+.+.|++||+|+.+
T Consensus 82 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 161 (256)
T d1k2wa_ 82 ILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVIS 161 (256)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHH
Confidence 9999999998889999999999999999999999999999997654 457999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+|+++.|++++|||||+|+||+++|++.+...
T Consensus 162 lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~ 194 (256)
T d1k2wa_ 162 LTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVD 194 (256)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHH
T ss_pred HHHHHHHHhcccCeEEEEEecCCCCchhhhhhh
Confidence 999999999999999999999999999976543
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=100.00 E-value=1.9e-46 Score=291.01 Aligned_cols=193 Identities=58% Similarity=0.907 Sum_probs=179.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+..+.++.+|++++++++++++++.+.+++++|
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~id 86 (258)
T d1ae1a_ 7 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLN 86 (258)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcE
Confidence 79999999999999999999999999999999999999999999988889999999999999999999999999867899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+++.++|++++++|+.+++.++++++|+|.+++.|+||++||.++..+.|+...|+++|+|+++|
T Consensus 87 ilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~l 166 (258)
T d1ae1a_ 87 ILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQM 166 (258)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHH
Confidence 99999999988999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+|.++.|++++|||||+|+||+++|||......
T Consensus 167 t~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~ 199 (258)
T d1ae1a_ 167 TKSLACEWAKDNIRVNSVAPGVILTPLVETAIK 199 (258)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBC---------
T ss_pred HHHHHHhcCcCcEEEEEEeeCcccCcchhhhhh
Confidence 999999999999999999999999999865543
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-47 Score=294.02 Aligned_cols=186 Identities=27% Similarity=0.406 Sum_probs=173.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++ .++.++.+|++|+++++++++++.++| ++||
T Consensus 7 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iD 81 (250)
T d1ydea1 7 KVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF-GRLD 81 (250)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc-CCCC
Confidence 89999999999999999999999999999999998888777664 357889999999999999999999999 7999
Q ss_pred EEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||... ..++++.+.++|++.+++|+.|++.++|+++|+|+++ .|+||++||.++..+.|+..+|+++|+|+.+
T Consensus 82 ilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ 160 (250)
T d1ydea1 82 CVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVTA 160 (250)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHHH
T ss_pred EEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccccCcchhHHHHhhHHH
Confidence 9999999764 4567889999999999999999999999999999876 4899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+|+|+.|++++|||||+|+||+|+|||.+...
T Consensus 161 lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~ 193 (250)
T d1ydea1 161 MTKALALDESPYGVRVNCISPGNIWTPLWEELA 193 (250)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHH
T ss_pred HHHHHHHHhcccCeEEEEEeeCCCCChhHHHHh
Confidence 999999999999999999999999999986543
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.1e-46 Score=289.83 Aligned_cols=186 Identities=26% Similarity=0.305 Sum_probs=172.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++ +..++.+|++|+++++++++++.+++ ++||
T Consensus 6 K~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 79 (242)
T d1ulsa_ 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL-GRLD 79 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc-CCce
Confidence 79999999999999999999999999999999998888776654 36678999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+....++.+.+.++|++++++|+.|++.++|+++|+|.+++.+.++++|| .+..+.|+..+|++||+|+.+|
T Consensus 80 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~l 158 (242)
T d1ulsa_ 80 GVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAGVVGL 158 (242)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHHHHHH
T ss_pred EEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHHHHHH
Confidence 999999999888999999999999999999999999999999999887777777776 5678889999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+|+|+.|++++|||||+|+||+|+|+|....++
T Consensus 159 tk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~ 191 (242)
T d1ulsa_ 159 TRTLALELGRWGIRVNTLAPGFIETRMTAKVPE 191 (242)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCH
T ss_pred HHHHHHHHhhhCcEEEEEeeCcccChhhhcCCH
Confidence 999999999999999999999999999876544
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=100.00 E-value=5.1e-46 Score=290.29 Aligned_cols=190 Identities=25% Similarity=0.390 Sum_probs=175.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++...+ .+.++.+|++|+++++++++++.+++ +++|
T Consensus 7 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 84 (268)
T d2bgka1 7 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH-GKLD 84 (268)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc-CCcc
Confidence 799999999999999999999999999999999999999999886544 47788999999999999999999999 7999
Q ss_pred EEEEcCCCCCCC--CCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCC-hhhhhhHHHH
Q 028868 81 ILINNAAIAFVK--PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSV-SLYGAYKGAM 157 (202)
Q Consensus 81 ~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~-~~y~asK~a~ 157 (202)
++|||||..... .+.+.+.++|+.++++|+.|++.++|+++|+|.+++.|+||+++|..+..+.++. ..|++||+|+
T Consensus 85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaal 164 (268)
T d2bgka1 85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAV 164 (268)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHH
T ss_pred eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHHH
Confidence 999999986544 4678899999999999999999999999999999889999999999998877665 4899999999
Q ss_pred HHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 158 NQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 158 ~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
.+|+|+++.|++++|||||+|+||+|+|||..+..
T Consensus 165 ~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 199 (268)
T d2bgka1 165 LGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVF 199 (268)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSS
T ss_pred HhCHHHHHHHhChhCeEEEecCCCCccChHHhhhh
Confidence 99999999999999999999999999999986543
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=100.00 E-value=2.6e-46 Score=289.47 Aligned_cols=186 Identities=32% Similarity=0.323 Sum_probs=174.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.+..++.+|++|+++++++++++.+++ +++|
T Consensus 7 K~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iD 82 (253)
T d1hxha_ 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN 82 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh-CCCC
Confidence 79999999999999999999999999999999999998888776 4468889999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++.+++|+.+++.++|+++|+|+++ .|+||++||.++..+.++..+|++||+|+.+|
T Consensus 83 ilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 161 (253)
T d1hxha_ 83 VLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET-GGSIINMASVSSWLPIEQYAGYSASKAAVSAL 161 (253)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred eEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCceecccchhhhcCccccccccchhHHHHHH
Confidence 99999999888899999999999999999999999999999999765 59999999999999999999999999999999
Q ss_pred HHHHHHHHccC--CcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKD--NIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~--gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+++.|++++ +||||+|+||+|+|++.+..
T Consensus 162 t~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~ 194 (253)
T d1hxha_ 162 TRAAALSCRKQGYAIRVNSIHPDGIYTPMMQAS 194 (253)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEESEECCHHHHHH
T ss_pred HHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhh
Confidence 99999999874 59999999999999987543
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=1.2e-46 Score=288.62 Aligned_cols=180 Identities=28% Similarity=0.417 Sum_probs=161.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.+ .++..+.+|++|+++++++++++.+++ ++||
T Consensus 8 K~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 75 (237)
T d1uzma1 8 RSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ-GPVE 75 (237)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHH-SSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHhc-CCce
Confidence 7999999999999999999999999999999987543 246788999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||+....++.+.+.++|++++++|+.+++.++|+++|+|++++.|+||++||.++..+.++..+|++||+|+.+|
T Consensus 76 iLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 155 (237)
T d1uzma1 76 VLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGM 155 (237)
T ss_dssp EEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHH
T ss_pred EEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHH
Confidence 99999999988899999999999999999999999999999999999899999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+++.|++++|||||+|+||+|+|+|.+...
T Consensus 156 t~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~ 187 (237)
T d1uzma1 156 ARSIARELSKANVTANVVAPGYIDTDMTRALD 187 (237)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCHHHHHSC
T ss_pred HHHHHhhhhcCCceeeeeeeCcCCChhhhccC
Confidence 99999999999999999999999999986543
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=1.2e-45 Score=287.54 Aligned_cols=189 Identities=31% Similarity=0.465 Sum_probs=164.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++.+|++++++++++++++.+++ +
T Consensus 6 KvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g 84 (264)
T d1spxa_ 6 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF-G 84 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 799999999999999999999999999999999999999999987653 359999999999999999999999999 7
Q ss_pred CccEEEEcCCCCCC----CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCC-CCccCCCCChhhhh
Q 028868 78 KLNILINNAAIAFV----KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV-GGVRGIPSVSLYGA 152 (202)
Q Consensus 78 ~id~vi~~ag~~~~----~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~-~~~~~~~~~~~y~a 152 (202)
+||++|||||.... .++.+.+.++|+..+++|+.+++.++|+++|+|++++ |.+|+++|. ++..+.|+...|++
T Consensus 85 ~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~~~~~~~~~~~Y~a 163 (264)
T d1spxa_ 85 KLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHATPDFPYYSI 163 (264)
T ss_dssp CCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSCCTTSHHHHH
T ss_pred CCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-CcceeeeeeccccccCCCchhhhh
Confidence 99999999998633 3456678999999999999999999999999998775 556665655 46789999999999
Q ss_pred hHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 153 YKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 153 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
||+|+.+|+|+|+.|++++|||||+|+||+|+|+|....
T Consensus 164 sKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~ 202 (264)
T d1spxa_ 164 AKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAM 202 (264)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC----
T ss_pred hhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhcc
Confidence 999999999999999999999999999999999988654
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=9.9e-46 Score=289.19 Aligned_cols=190 Identities=26% Similarity=0.395 Sum_probs=171.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++.+|++|+++++++++++.++| +
T Consensus 6 K~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g 84 (272)
T d1xkqa_ 6 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF-G 84 (272)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 799999999999999999999999999999999999999999987653 469999999999999999999999999 7
Q ss_pred CccEEEEcCCCCCCCCC----CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 78 KLNILINNAAIAFVKPT----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+||++|||||.....++ .+.+.++|++++++|+.+++.++|+++|+|++++.+.|++.||.++..+.|+...|++|
T Consensus 85 ~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~as 164 (272)
T d1xkqa_ 85 KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIA 164 (272)
T ss_dssp CCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHHHH
T ss_pred CceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhhhH
Confidence 99999999998765544 45678899999999999999999999999987654444445556778999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
|+|+.+|+|+|+.|++++|||||+|+||+|+|+|....
T Consensus 165 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~ 202 (272)
T d1xkqa_ 165 KAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAM 202 (272)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHT
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhcc
Confidence 99999999999999999999999999999999987643
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=2.2e-45 Score=287.47 Aligned_cols=190 Identities=24% Similarity=0.386 Sum_probs=176.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++.+|++|+++++++++++.++| +
T Consensus 5 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G 83 (274)
T d1xhla_ 5 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF-G 83 (274)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc-C
Confidence 799999999999999999999999999999999999999999987764 368999999999999999999999999 7
Q ss_pred CccEEEEcCCCCCCC--CCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 78 KLNILINNAAIAFVK--PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 78 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
+||++|||||..... +..+.+.++|+..+++|+.+++.++|+++|+|.+++.++|+++||.++..+.++...|+++|+
T Consensus 84 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asKa 163 (274)
T d1xhla_ 84 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKA 163 (274)
T ss_dssp CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHH
T ss_pred CceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhhh
Confidence 999999999976443 345568899999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
|+.+|+|+++.|++++|||||+|+||+|+||+....
T Consensus 164 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~ 199 (274)
T d1xhla_ 164 ALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAM 199 (274)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHT
T ss_pred HHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhh
Confidence 999999999999999999999999999999987543
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-44 Score=286.27 Aligned_cols=190 Identities=32% Similarity=0.455 Sum_probs=177.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-----GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-----~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++... +.++.++.+|++|+++++++++++.+.+
T Consensus 13 KvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 92 (297)
T d1yxma1 13 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 92 (297)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHh
Confidence 79999999999999999999999999999999999999999888642 5689999999999999999999999999
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
++||++|||||.....++.+.+.++|++++++|+.|++.++|+++|.|.+++.++||++|| ++..+.|+...|+++|+
T Consensus 93 -G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y~asKa 170 (297)
T d1yxma1 93 -GKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARA 170 (297)
T ss_dssp -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHHHHHHH
T ss_pred -CCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccchhHHH
Confidence 7999999999999888999999999999999999999999999999999888899998866 56677899999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+.+|+|+++.|++++|||||+|+||+|+|++..+..
T Consensus 171 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 207 (297)
T d1yxma1 171 GVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENY 207 (297)
T ss_dssp HHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTS
T ss_pred HHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhc
Confidence 9999999999999999999999999999999875443
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-45 Score=281.09 Aligned_cols=183 Identities=34% Similarity=0.461 Sum_probs=168.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+..+.+|++|+++++++++ ++ ++||
T Consensus 8 K~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----~~-g~iD 78 (244)
T d1pr9a_ 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----SV-GPVD 78 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC-CCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hh-CCce
Confidence 799999999999999999999999999999999998888776653 47788999999999887765 45 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHH-hcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF-KASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++|+..+++|+.+++.+++.++|.| ++++.|+||++||.++..+.|+...|++||+|+.+
T Consensus 79 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~ 158 (244)
T d1pr9a_ 79 LLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDM 158 (244)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHH
Confidence 99999999988999999999999999999999999999999965 55568999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+|+++.|++++|||||+|+||+|+|++.+...
T Consensus 159 lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~ 191 (244)
T d1pr9a_ 159 LTKVMALELGPHKIRVNAVNPTVVMTSMGQATW 191 (244)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTS
T ss_pred HHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhc
Confidence 999999999999999999999999999876543
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=5.6e-45 Score=280.22 Aligned_cols=183 Identities=34% Similarity=0.460 Sum_probs=168.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++. .+..+.+|++|+++++++++ ++ ++||
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~----~~-g~iD 76 (242)
T d1cyda_ 6 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP----GIEPVCVDLGDWDATEKALG----GI-GPVD 76 (242)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----TC-CCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----Hc-CCCe
Confidence 799999999999999999999999999999999988888776653 47788999999999887765 45 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHh-cCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK-ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
++|||||.....++.+.+.++|++.+++|+.+++.++|.++|.|. ++..|+||+++|.++..+.|+...|+++|+|+.+
T Consensus 77 ilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~ 156 (242)
T d1cyda_ 77 LLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTM 156 (242)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHH
Confidence 999999999888999999999999999999999999999999764 4467899999999999999999999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+|+++.|++++|||||+|+||+++|||.....
T Consensus 157 lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~ 189 (242)
T d1cyda_ 157 LTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVS 189 (242)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHT
T ss_pred HHHHHHHHhCccCeecccCCCCCccCHHHHhhc
Confidence 999999999999999999999999999876543
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-44 Score=276.29 Aligned_cols=192 Identities=27% Similarity=0.341 Sum_probs=177.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++.+.+ .++.++.+|++++++++++++++.+++ ++
T Consensus 11 Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~-g~ 89 (257)
T d1xg5a_ 11 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH-SG 89 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH-CC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc-CC
Confidence 799999999999999999999999999999999999999999998764 578999999999999999999999999 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--CCeEEEecCCCCccC--CCCChhhhhhH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRG--IPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~--~~~~~~y~asK 154 (202)
||++|||||.....++.+.+.++|+..+++|+.++++++++++|.|.+++ .|+||++||.++... .++...|+++|
T Consensus 90 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sK 169 (257)
T d1xg5a_ 90 VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATK 169 (257)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHH
T ss_pred CCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHH
Confidence 99999999999888999999999999999999999999999999998654 689999999998754 45567799999
Q ss_pred HHHHHHHHHHHHHH--ccCCcEEEEeeCCcccCCCccchhh
Q 028868 155 GAMNQLTKNLACEW--AKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 155 ~a~~~~~~~la~e~--~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+++.+|+|+|+.|+ ++.||+||+|+||+++|++.....+
T Consensus 170 aal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~ 210 (257)
T d1xg5a_ 170 YAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHD 210 (257)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTT
T ss_pred HHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcCh
Confidence 99999999999998 6789999999999999998875544
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=100.00 E-value=3.9e-44 Score=278.39 Aligned_cols=192 Identities=31% Similarity=0.435 Sum_probs=174.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+ .+.++.++.+|++|+++++++++++.+++ +++
T Consensus 10 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i 88 (260)
T d1h5qa_ 10 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-GPI 88 (260)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS-CSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh-CCC
Confidence 7899999999999999999999999999999999999888887754 37789999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHh-cCCCCeEEEecCCCCcc-------CCCCChhhh
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFK-ASGNGSIVFISSVGGVR-------GIPSVSLYG 151 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~~~-------~~~~~~~y~ 151 (202)
|++|||||.....++.+.+.++|++.+++|+.|++.+++++.|+|. ++..+.|++++|..... +.++...|+
T Consensus 89 DilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~ 168 (260)
T d1h5qa_ 89 SGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYN 168 (260)
T ss_dssp EEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHH
T ss_pred cEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchh
Confidence 9999999999888999999999999999999999999999999985 44567888877766543 345778999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
++|+|+.+|+|+++.|++++|||||+|+||+|+|++.....+
T Consensus 169 asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~ 210 (260)
T d1h5qa_ 169 SSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDK 210 (260)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCH
T ss_pred hhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCH
Confidence 999999999999999999999999999999999999875543
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-44 Score=277.81 Aligned_cols=183 Identities=26% Similarity=0.350 Sum_probs=168.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+++.+. +.++.++.+|++|+++++++++++.+++ ++
T Consensus 4 KvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~ 82 (254)
T d2gdza1 4 KVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF-GR 82 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc-CC
Confidence 89999999999999999999999999999999999999999888654 4579999999999999999999999999 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC---CCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG---NGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~---~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
||++|||||.... ++|++++++|+.+++.+++.++|+|.+++ .|+||++||.++..+.|+.++|++||+
T Consensus 83 iDilVnnAg~~~~--------~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa 154 (254)
T d2gdza1 83 LDILVNNAGVNNE--------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKH 154 (254)
T ss_dssp CCEEEECCCCCCS--------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred cCeeccccccccc--------ccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHH
Confidence 9999999998542 45889999999999999999999997653 488999999999999999999999999
Q ss_pred HHHHHHHH--HHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 156 AMNQLTKN--LACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 156 a~~~~~~~--la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+.+|+|+ |+.|++++|||||+|+||+|+|+|++...
T Consensus 155 al~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~ 193 (254)
T d2gdza1 155 GIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIE 193 (254)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGG
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhcc
Confidence 99999996 78899999999999999999999986544
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=1.5e-44 Score=279.54 Aligned_cols=183 Identities=22% Similarity=0.220 Sum_probs=168.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
|+|||||++|||+++|++|+++|++|++++|+.++++++...... +..+|++++++++++++++.++| ++||+
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~------~~~~dv~~~~~~~~~~~~~~~~~-G~iDi 74 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET------YPQLKPMSEQEPAELIEAVTSAY-GQVDV 74 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH------CTTSEECCCCSHHHHHHHHHHHH-SCCCE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCc------EEEeccCCHHHHHHHHHHHHHHc-CCCCE
Confidence 799999999999999999999999999999998887766544322 33589999999999999999999 79999
Q ss_pred EEEcCCCC-CCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 82 LINNAAIA-FVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 82 vi~~ag~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
+|||||+. ...++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||++||.++..+.++...|++||+|+.+|
T Consensus 75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l 154 (252)
T d1zmta1 75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL 154 (252)
T ss_dssp EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence 99999976 45788999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
+|+|+.|++++|||||+|+||+|+|++....
T Consensus 155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~ 185 (252)
T d1zmta1 155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYF 185 (252)
T ss_dssp HHHHHHHHGGGTCCEEEEEESSBCCBTCCSS
T ss_pred HHHHHHHhcccCcEEEEEecCCCcCcchhhh
Confidence 9999999999999999999999999987654
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=100.00 E-value=1.5e-43 Score=277.20 Aligned_cols=186 Identities=28% Similarity=0.342 Sum_probs=168.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++++.+++ +.++..+.+|++++++++++++++.+++ +++|
T Consensus 6 K~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id 81 (276)
T d1bdba_ 6 EAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF-GKID 81 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh-CCcc
Confidence 79999999999999999999999999999999999888877665 4579999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCC-----CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 81 ILINNAAIAFVKP-----TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 81 ~vi~~ag~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
++|||||+....+ ..+.+.++|++++++|+.|++.++|+++|+|+++ .|+||+++|.++..+.++.+.|++||+
T Consensus 82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~~~~~~~~~~~~Y~asKa 160 (276)
T d1bdba_ 82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISNAGFYPNGGGPLYTAAKH 160 (276)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGTSTTSSCHHHHHHHH
T ss_pred cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeechhccCCCCCchHHHHHH
Confidence 9999999764332 2445567899999999999999999999999876 489999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+.+|+|+++.|+++ +||||+|+||+|+|+|..+..
T Consensus 161 al~~ltr~lA~ela~-~IrVN~I~PG~i~T~~~~~~~ 196 (276)
T d1bdba_ 161 AIVGLVRELAFELAP-YVRVNGVGSGGINSDLRGPSS 196 (276)
T ss_dssp HHHHHHHHHHHHHTT-TCEEEEEEECCCCSCCCCCGG
T ss_pred HHHHHHHHHHHHhhc-ceEEcccCCCCEecCcCCccc
Confidence 999999999999986 599999999999999876443
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-44 Score=284.00 Aligned_cols=189 Identities=21% Similarity=0.261 Sum_probs=164.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEE---EEeCChhH---HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVH---TCSRNQIE---LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi---~~~r~~~~---~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||++|||+++|++|+++|++|+ .++|+.+. +.+..+++...+.++.++.+|++|.++++++++++.+
T Consensus 3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~- 81 (285)
T d1jtva_ 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE- 81 (285)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT-
T ss_pred CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc-
Confidence 5789999999999999999999998754 45565544 4444455555577899999999999999999987642
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+.+|+++||+|.....++.+.+.++|+.++++|+.|+++++++++|+|++++.|+||++||.++..+.|+.+.|++||
T Consensus 82 --g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asK 159 (285)
T d1jtva_ 82 --GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASK 159 (285)
T ss_dssp --SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred --cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHH
Confidence 689999999999988899999999999999999999999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+.+|+++|+.|+.++||+||+|+||+|+|+|.+...
T Consensus 160 aal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~ 197 (285)
T d1jtva_ 160 FALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVL 197 (285)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------
T ss_pred HHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhc
Confidence 99999999999999999999999999999999987543
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=1.9e-43 Score=274.41 Aligned_cols=189 Identities=26% Similarity=0.374 Sum_probs=172.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe-CChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS-RNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~-r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++ |+++.++.+.+++.+.+.++..+.+|++|+++++++++++.+++ ++|
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i 85 (259)
T d1ja9a_ 7 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-GGL 85 (259)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-SCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc-CCC
Confidence 7999999999999999999999999999865 56666788888888888899999999999999999999999999 789
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-CCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-GIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-~~~~~~~y~asK~a~~ 158 (202)
|++|||||.....++.+.+.++|++.+++|+.+++.++|.++|+|+++ +.+++++|..+.. +.|+...|+++|+|+.
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~~~~~~~~~~Y~asK~al~ 163 (259)
T d1ja9a_ 86 DFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAVMTGIPNHALYAGSKAAVE 163 (259)
T ss_dssp EEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGTCCSCCSCHHHHHHHHHHH
T ss_pred cEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--CcccccccccccccCCCCchhHHHHHHHHH
Confidence 999999999988899999999999999999999999999999999764 5777777765544 7889999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+|+|+.|+++.|||||+|+||+++|+|.++..
T Consensus 164 ~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~ 197 (259)
T d1ja9a_ 164 GFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENS 197 (259)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHG
T ss_pred HHHHHHHHHHhhcCeEEeccCcCCccChhhhhhh
Confidence 9999999999999999999999999999876543
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-44 Score=279.89 Aligned_cols=192 Identities=28% Similarity=0.340 Sum_probs=172.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARF-GAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++ |++|++++|++++++++.+++++.+.++.++.+|++|.++++++++++.+++ ++|
T Consensus 4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g~i 82 (275)
T d1wmaa1 4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-GGL 82 (275)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-SSE
T ss_pred eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-CCc
Confidence 57899999999999999999986 8999999999999999999999888899999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC----------------
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG---------------- 143 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~---------------- 143 (202)
|+||||||+....+..+.+.++|+..+++|++|++.+++.++|+|++ .|+||++||..+..+
T Consensus 83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~ 160 (275)
T d1wmaa1 83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRSET 160 (275)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhcccc
Confidence 99999999988778888889999999999999999999999999976 489999999765422
Q ss_pred -------------------------CCCChhhhhhHHHHHHHHHHHHHHHcc----CCcEEEEeeCCcccCCCccchhhh
Q 028868 144 -------------------------IPSVSLYGAYKGAMNQLTKNLACEWAK----DNIRTNTVAPWVIKTSMIKPFEVL 194 (202)
Q Consensus 144 -------------------------~~~~~~y~asK~a~~~~~~~la~e~~~----~gi~v~~v~pG~v~t~~~~~~~~~ 194 (202)
..+...|++||+++.+|++.++.++++ .||+||+|+||+|+|+|..+....
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~~~ 240 (275)
T d1wmaa1 161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATK 240 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCSB
T ss_pred cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcccC
Confidence 223457999999999999999999865 489999999999999998765443
Q ss_pred c
Q 028868 195 S 195 (202)
Q Consensus 195 ~ 195 (202)
.
T Consensus 241 ~ 241 (275)
T d1wmaa1 241 S 241 (275)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=9.3e-44 Score=281.33 Aligned_cols=189 Identities=27% Similarity=0.360 Sum_probs=173.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC---------hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN---------QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~---------~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
|++|||||++|||+++|++|+++|++|++.+++ .+.+++..+++...+ ....+|+++.++++++++++
T Consensus 8 KvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~~v~~~ 84 (302)
T d1gz6a_ 8 RVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAGEKLVKTA 84 (302)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHHHHHHHHH
Confidence 799999999999999999999999999998654 456677777776544 34567999999999999999
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhh
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG 151 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~ 151 (202)
.+++ ++||+||||||+....++.+.+.++|++++++|+.|++.++|+++|+|++++.|+||++||.++..+.++...|+
T Consensus 85 ~~~~-G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~ 163 (302)
T d1gz6a_ 85 LDTF-GRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYS 163 (302)
T ss_dssp HHHT-SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHH
T ss_pred HHHc-CCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHH
Confidence 9999 799999999999988999999999999999999999999999999999998889999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+||+|+.+|+++|+.|++++|||||+|+||++.|++....++
T Consensus 164 asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~ 205 (302)
T d1gz6a_ 164 AAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE 205 (302)
T ss_dssp HHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH
T ss_pred HHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH
Confidence 999999999999999999999999999999999887665443
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=100.00 E-value=2.3e-43 Score=271.09 Aligned_cols=186 Identities=26% Similarity=0.338 Sum_probs=164.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+.+++++..++ .+.++.++++|++++++++++++++.+++ +++|
T Consensus 6 K~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dls~~~~i~~~~~~i~~~~-g~iD 81 (241)
T d2a4ka1 6 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---LEAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH 81 (241)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---CCSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---cCCceEEEEecCCCHHHHHHHHHHHHHHh-CCcc
Confidence 7999999999999999999999999999999999877666554 46689999999999999999999999999 7999
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++++++|+.+++.++|+++|+|.+ .+.++++||. +..+.|+...|+++|+|+++|
T Consensus 82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~-a~~~~~~~~~Y~~sK~al~~l 158 (241)
T d2a4ka1 82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSV-AGLGAFGLAHYAAGKLGVVGL 158 (241)
T ss_dssp EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCC-TTCCHHHHHHHHHCSSHHHHH
T ss_pred Eeccccccccccchhhhhcccccccccccccccccccccccccccc--ccceeecccc-ccccccCccccchhhHHHHHH
Confidence 9999999998899999999999999999999999999999999865 3456655554 556668899999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+|.|+.|++++|||||+|+||+++|+|....++
T Consensus 159 t~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~ 191 (241)
T d2a4ka1 159 ARTLALELARKGVRVNVLLPGLIQTPMTAGLPP 191 (241)
T ss_dssp HHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCH
T ss_pred HHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhH
Confidence 999999999999999999999999999875543
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=100.00 E-value=6.7e-43 Score=269.71 Aligned_cols=192 Identities=24% Similarity=0.264 Sum_probs=168.6
Q ss_pred CEEEEecCCCchHHHHHHHHH---HCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH--Hh
Q 028868 1 MTALVTGGTRGIGHATVEELA---RFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS--IF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~---~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~--~~ 75 (202)
|+||||||++|||+++|++|+ ++|++|++++|++++++.+.+ +.+.+.++.++.+|++|+++++++++++++ .+
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 799999999999999999997 479999999999998877654 444466899999999999999999999865 45
Q ss_pred CCCccEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-----------CCCeEEEecCCCCcc-
Q 028868 76 QGKLNILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-----------GNGSIVFISSVGGVR- 142 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----------~~~~iv~vsS~~~~~- 142 (202)
+++|++|||||+... .+..+.+.++|++++++|+.|++.++++++|+|+++ ..|++|+++|..+..
T Consensus 82 -~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~ 160 (248)
T d1snya_ 82 -QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ 160 (248)
T ss_dssp -GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred -CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence 689999999998644 457788999999999999999999999999999753 368999999988764
Q ss_pred --CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhhh
Q 028868 143 --GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194 (202)
Q Consensus 143 --~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~ 194 (202)
+.++...|++||+|+.+|+++++.|+.++||+||+|+||+|+|+|..+..+.
T Consensus 161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~ 214 (248)
T d1snya_ 161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPL 214 (248)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCSB
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCCC
Confidence 4556779999999999999999999999999999999999999998765543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6.1e-43 Score=271.56 Aligned_cols=190 Identities=25% Similarity=0.265 Sum_probs=172.3
Q ss_pred CEEEEecCCCchHHHHHHHHHH---CCCEEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHH-
Q 028868 1 MTALVTGGTRGIGHATVEELAR---FGAIVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSI- 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~---~g~~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~- 74 (202)
|++|||||++|||+++|++|++ +|++|++++|++++++++.+++... +.++.++.+|++++++++++++.+.+.
T Consensus 7 KvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~ 86 (259)
T d1oaaa_ 7 AVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELP 86 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhh
Confidence 7899999999999999999996 7999999999999999999998754 558999999999999999999998774
Q ss_pred --hCCCccEEEEcCCCCC---CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC--CCeEEEecCCCCccCCCCC
Q 028868 75 --FQGKLNILINNAAIAF---VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG--NGSIVFISSVGGVRGIPSV 147 (202)
Q Consensus 75 --~~~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~iv~vsS~~~~~~~~~~ 147 (202)
.++.+|++|||||... ..++.+.+.++|++++++|+.+++.++|.++|+|++++ .|+||++||.++..+.|+.
T Consensus 87 ~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~ 166 (259)
T d1oaaa_ 87 RPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGW 166 (259)
T ss_dssp CCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTC
T ss_pred hhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccc
Confidence 2357999999999753 44577889999999999999999999999999998764 5899999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 148 SLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 148 ~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+.|++||+|+.+|+|+|+.| .+|||||+|+||+|+|+|.+...
T Consensus 167 ~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~ 209 (259)
T d1oaaa_ 167 GLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLAR 209 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhh
Confidence 99999999999999999999 57999999999999999876544
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-42 Score=269.87 Aligned_cols=189 Identities=24% Similarity=0.285 Sum_probs=176.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++||||||+|||+++|++|+++|++|++++|++++++++.+++.. .+..+..+.+|+++.+++....+.+.+.+ +.+
T Consensus 15 K~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-g~~ 93 (269)
T d1xu9a_ 15 KKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-GGL 93 (269)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-TSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh-CCc
Confidence 7999999999999999999999999999999999999999888654 46788999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
|+++||||.....++.+.+.++|++++++|+.|++.+++.++|+|+++ .|+||++||.++..+.|+...|++||+|+.+
T Consensus 94 ~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~-~G~ii~isS~~~~~~~p~~~~Y~asKaal~~ 172 (269)
T d1xu9a_ 94 DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFALDG 172 (269)
T ss_dssp SEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHHHHH
T ss_pred cccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc-CCcceEeccchhcCCCCCchHHHHHHHHHHH
Confidence 999999999888888899999999999999999999999999999864 6999999999999999999999999999999
Q ss_pred HHHHHHHHHcc--CCcEEEEeeCCcccCCCccch
Q 028868 160 LTKNLACEWAK--DNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 160 ~~~~la~e~~~--~gi~v~~v~pG~v~t~~~~~~ 191 (202)
|+++|+.|+++ .||+|++|+||+|+|+|..+.
T Consensus 173 ~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~ 206 (269)
T d1xu9a_ 173 FFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKA 206 (269)
T ss_dssp HHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHH
T ss_pred HHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHh
Confidence 99999999974 469999999999999987543
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=100.00 E-value=2.8e-42 Score=269.57 Aligned_cols=191 Identities=27% Similarity=0.400 Sum_probs=175.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+ ++.++.+.+++.+.+.++.++.+|++|+++++++++++.+.+ +++
T Consensus 19 K~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i 97 (272)
T d1g0oa_ 19 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-GKL 97 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh-CCC
Confidence 799999999999999999999999999999876 566788888888888899999999999999999999999999 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~ 158 (202)
|++|||+|.....++.+.+.++|++.+++|+.+++.++++++|+|.+ .+++++++|..+. .+.++...|+++|+|++
T Consensus 98 dilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~ 175 (272)
T d1g0oa_ 98 DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQAKAVPKHAVYSGSKGAIE 175 (272)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTCSSCSSCHHHHHHHHHHH
T ss_pred CccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccc--ccccccccccccccccccchhhHHHHHHHHH
Confidence 99999999998889999999999999999999999999999999976 4788888887754 46777889999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchhhh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~ 194 (202)
+|+|+++.|++++|||||+|+||+|+|++.+.....
T Consensus 176 ~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~ 211 (272)
T d1g0oa_ 176 TFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCRE 211 (272)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGG
T ss_pred HHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHh
Confidence 999999999999999999999999999987655433
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=100.00 E-value=7.8e-43 Score=270.00 Aligned_cols=182 Identities=21% Similarity=0.273 Sum_probs=162.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-hcCCeEEEEEecCC-CHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-NKGFKVTGSVCDLS-SREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-~~~~~v~~~~~Dv~-~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++|||+++|++|+++|++|++++|+.++.+...+... ..+.++.++.+|++ +.++++++++++.+.+ ++
T Consensus 6 K~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-g~ 84 (254)
T d1sbya1 6 KNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-KT 84 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-SC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc-CC
Confidence 799999999999999999999999999999888776655544333 23558999999998 6788999999999999 79
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC---CCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS---GNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~---~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
||+||||||.. +.+.|++++++|+.|++.++++++|+|.++ ..|+||++||.++..+.++...|++||+
T Consensus 85 iDilvnnAG~~--------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKa 156 (254)
T d1sbya1 85 VDILINGAGIL--------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKA 156 (254)
T ss_dssp CCEEEECCCCC--------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHH
T ss_pred CCEEEeCCCCC--------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHH
Confidence 99999999963 456789999999999999999999999764 3689999999999999999999999999
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
|+.+|+++|+.|+.+.|||||+|+||+|+|||.+..
T Consensus 157 al~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~ 192 (254)
T d1sbya1 157 AVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTF 192 (254)
T ss_dssp HHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSC
T ss_pred HHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccc
Confidence 999999999999999999999999999999986543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=4.3e-42 Score=262.96 Aligned_cols=176 Identities=28% Similarity=0.335 Sum_probs=159.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++.+++. + ..++.+|+++. ++.+.+++ ++||
T Consensus 5 K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~-------~--~~~~~~Dv~~~------~~~~~~~~-g~iD 68 (234)
T d1o5ia_ 5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRS-------G--HRYVVCDLRKD------LDLLFEKV-KEVD 68 (234)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHT-------C--SEEEECCTTTC------HHHHHHHS-CCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhc-------C--CcEEEcchHHH------HHHHHHHh-CCCc
Confidence 7999999999999999999999999999999997655432 2 34567999873 34455566 7899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQL 160 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~ 160 (202)
++|||||.....++.+.+.++|++.+++|+.+++.++|+++|+|++++.|+||+++|..+..+.++...|+++|+|+.+|
T Consensus 69 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~l 148 (234)
T d1o5ia_ 69 ILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGF 148 (234)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHH
Confidence 99999999888899999999999999999999999999999999988889999999999999999999999999999999
Q ss_pred HHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 161 TKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 161 ~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+++.|++++|||||+|+||+++|++.....
T Consensus 149 tk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~ 180 (234)
T d1o5ia_ 149 LKTLSFEVAPYGITVNCVAPGWTETERVKELL 180 (234)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS
T ss_pred HHHHHHHhcccCeEEeecccCccchhhhhhhc
Confidence 99999999999999999999999999986543
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=6e-42 Score=265.48 Aligned_cols=188 Identities=21% Similarity=0.241 Sum_probs=162.2
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+| |||+++|++|+++|++|++++|+++..+... ++...+.+..++.+|++|+++++++++++.+++ ++
T Consensus 9 K~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 86 (256)
T d1ulua_ 9 KKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-KLAEALGGALLFRADVTQDEELDALFAGVKEAF-GG 86 (256)
T ss_dssp CEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-HhhhccCcccccccccCCHHHHHHHHHHHHHhc-CC
Confidence 7999999987 9999999999999999999999876555443 444445567889999999999999999999999 79
Q ss_pred ccEEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
||++|||||... ..++.+.+.++|+..+++|+.+++.+++++.|+|++ .|+||++||..+..+.|+...|+++|
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~~~~~~~~~~~~Y~asK 164 (256)
T d1ulua_ 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYASEKVVPKYNVMAIAK 164 (256)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeehHhcCCCCCchHHHHHH
Confidence 999999999863 235667889999999999999999999999999976 58999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+.+++|+++.|++++|||||+|+||+++|++....+
T Consensus 165 aal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~ 202 (256)
T d1ulua_ 165 AALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP 202 (256)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCC---------
T ss_pred HHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh
Confidence 99999999999999999999999999999999876543
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-41 Score=260.23 Aligned_cols=182 Identities=24% Similarity=0.339 Sum_probs=162.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++++++..+ ...+....+|+.+.+.++...+ .+ +.+|
T Consensus 7 K~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~~~----~~-~~id 76 (245)
T d2ag5a1 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQFAN----EV-ERLD 76 (245)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHHHH----HC-SCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccccc----cc-ccce
Confidence 799999999999999999999999999999999877765433 2347778889988776665544 45 6899
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~~ 159 (202)
++|||+|.....++.+.+.++|+..+++|+.+++.++|++.|+|.+++.|+||+++|..+. .+.++..+|+++|+|+++
T Consensus 77 ~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~ 156 (245)
T d2ag5a1 77 VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIG 156 (245)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHH
T ss_pred eEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHH
Confidence 9999999998889999999999999999999999999999999998889999999998775 578899999999999999
Q ss_pred HHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 160 LTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 160 ~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
++|+++.|++++|||||+|+||+|+||+.....
T Consensus 157 l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~ 189 (245)
T d2ag5a1 157 LTKSVAADFIQQGIRCNCVCPGTVDTPSLQERI 189 (245)
T ss_dssp HHHHHHHHHGGGTEEEEEEEESCEECHHHHHHH
T ss_pred HHHHHHHHhhhhCcEEEEEeeceeechhhHhhh
Confidence 999999999999999999999999999876443
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=100.00 E-value=7.8e-41 Score=258.34 Aligned_cols=191 Identities=23% Similarity=0.259 Sum_probs=156.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG- 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~- 77 (202)
|+||||||++|||+++|++|+++|+ +|++++|++++++++.+ ..+.++.++.+|++++++++++++++.+.++.
T Consensus 4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 80 (250)
T d1yo6a1 4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence 7999999999999999999999996 79999999988766442 23567999999999999999999999998743
Q ss_pred CccEEEEcCCCCC-CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-----------CCeEEEecCCCCccC--
Q 028868 78 KLNILINNAAIAF-VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-----------NGSIVFISSVGGVRG-- 143 (202)
Q Consensus 78 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-----------~~~iv~vsS~~~~~~-- 143 (202)
+||++|||||+.. ..+..+.+.++|++.+++|+.|++.+++.++|+|+++. .++++++++..+...
T Consensus 81 ~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~ 160 (250)
T d1yo6a1 81 GLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDN 160 (250)
T ss_dssp CCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTC
T ss_pred CeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCC
Confidence 5999999999764 46778899999999999999999999999999997531 378888888665443
Q ss_pred -----CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhhh
Q 028868 144 -----IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEVL 194 (202)
Q Consensus 144 -----~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~~ 194 (202)
..+..+|++||+|+.+|+++|+.|+.+.||+||+|+||+|+|+|..+....
T Consensus 161 ~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~~~ 216 (250)
T d1yo6a1 161 TSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAAL 216 (250)
T ss_dssp CSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------
T ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCCCC
Confidence 234567999999999999999999999999999999999999998655443
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=100.00 E-value=5.2e-40 Score=259.22 Aligned_cols=191 Identities=24% Similarity=0.331 Sum_probs=171.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-GFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|||||++|||+++|++|+++|++|++++|+.+++++..+++... +.++.++.+|++++++++++++.+.+++ +++
T Consensus 26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i 104 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA-GHP 104 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT-CSC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc-ccc
Confidence 79999999999999999999999999999999999999988887644 6789999999999999999999999998 799
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++|||||.....++.+.+.++|+..+.+|..+.+.+.+...+.+.. +..+.+++++|.++..+.++..+|+++|+|+.
T Consensus 105 DilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal~ 184 (294)
T d1w6ua_ 105 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVE 184 (294)
T ss_dssp SEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred chhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHHHH
Confidence 99999999988888999999999999999999999998887776654 45678888999989999999999999999999
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+|.++.|++++|||||+|+||+|+|++.....
T Consensus 185 ~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~ 218 (294)
T d1w6ua_ 185 AMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRL 218 (294)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCC------C
T ss_pred HHHHHHHHHHhHhCeEEEEEccCccccchhhhcc
Confidence 9999999999999999999999999999976554
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-40 Score=252.40 Aligned_cols=189 Identities=25% Similarity=0.344 Sum_probs=167.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++++...+++ +.+.....+|+.+.+.++....++...+ ..+|
T Consensus 6 KvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 81 (248)
T d2o23a1 6 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF-GRVD 81 (248)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc-cccc
Confidence 79999999999999999999999999999999999998888776 3468899999999999999999999888 7899
Q ss_pred EEEEcCCCCC------CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC------CCCeEEEecCCCCccCCCCCh
Q 028868 81 ILINNAAIAF------VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS------GNGSIVFISSVGGVRGIPSVS 148 (202)
Q Consensus 81 ~vi~~ag~~~------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~------~~~~iv~vsS~~~~~~~~~~~ 148 (202)
.++++++... ..+..+.+.++|++++++|+.+++++++++.|+|..+ +.|+||++||..+..+.|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~ 161 (248)
T d2o23a1 82 VAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQA 161 (248)
T ss_dssp EEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCH
T ss_pred ccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCch
Confidence 9999987653 2355677899999999999999999999999998643 468999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 149 LYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
.|+++|+|+++|+|+|+.|++++|||||+|+||+++|+|....++
T Consensus 162 ~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~ 206 (248)
T d2o23a1 162 AYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPE 206 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCH
Confidence 999999999999999999999999999999999999999876554
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.7e-38 Score=242.11 Aligned_cols=180 Identities=19% Similarity=0.167 Sum_probs=158.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
|++|||||++|||+++|++|+++|++|+++++++.. .........+|.++.++.+.+...+.+.++ +++
T Consensus 3 K~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (236)
T d1dhra_ 3 RRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 72 (236)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence 899999999999999999999999999999987532 123456777899989999888888888763 369
Q ss_pred cEEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 80 NILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 80 d~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
|++|||||.... .+..+.+.++|+.++++|+.+++.+++.++|+|++ .|+||++||.++..+.|+..+|++||+|+.
T Consensus 73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~~~~~~~~~~Y~asKaal~ 150 (236)
T d1dhra_ 73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKAALDGTPGMIGYGMAKGAVH 150 (236)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccHHHcCCccCCcccHHHHHHHH
Confidence 999999997543 45566778999999999999999999999999975 589999999999999999999999999999
Q ss_pred HHHHHHHHHHc--cCCcEEEEeeCCcccCCCccchh
Q 028868 159 QLTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 159 ~~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+|+|+|+.|++ ++|||||+|+||+++|||.+...
T Consensus 151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~ 186 (236)
T d1dhra_ 151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM 186 (236)
T ss_dssp HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS
T ss_pred HHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhC
Confidence 99999999998 57999999999999999986543
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=100.00 E-value=5.1e-37 Score=234.78 Aligned_cols=180 Identities=19% Similarity=0.175 Sum_probs=155.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF-QGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~-~~~id 80 (202)
+||||||++|||+++|++|+++|++|++++|+++.. ......+.+|+.+.+......+.+...+ .++||
T Consensus 4 kVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD 73 (235)
T d1ooea_ 4 KVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQVD 73 (235)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence 689999999999999999999999999999986431 2345566788888888877777776653 36899
Q ss_pred EEEEcCCCCCC-CCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFV-KPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~ 159 (202)
+||||||.... .+..+.+.++|+.++++|+.+++.++++++|+|++ .|+||++||..+..+.|+..+|++||+|+.+
T Consensus 74 ~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ 151 (235)
T d1ooea_ 74 GVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH 151 (235)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccHHhcCCcccccchHHHHHHHHH
Confidence 99999997644 34555667889999999999999999999999976 4899999999999999999999999999999
Q ss_pred HHHHHHHHHc--cCCcEEEEeeCCcccCCCccchhh
Q 028868 160 LTKNLACEWA--KDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 160 ~~~~la~e~~--~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
|+++|+.|+. +.+|+||+|+||+++|++.+...+
T Consensus 152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~ 187 (235)
T d1ooea_ 152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP 187 (235)
T ss_dssp HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST
T ss_pred HHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc
Confidence 9999999997 468999999999999999876543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=100.00 E-value=5.9e-36 Score=234.46 Aligned_cols=184 Identities=21% Similarity=0.229 Sum_probs=152.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCC-hhHHHHHHHHHHhc-CCeEEE-----------------EEecCCCHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRN-QIELDARLHEWKNK-GFKVTG-----------------SVCDLSSRE 62 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~-~~~~~~~~~~~~~~-~~~v~~-----------------~~~Dv~~~~ 62 (202)
++|||||++|||+++|++|+++|++|++++++ ++..+.+.+++... +..... ..+|+++++
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~ 83 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFT 83 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHH
Confidence 68999999999999999999999999987764 55666777777644 333444 455699999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHH--------------HHHHHHhHhHHHHHHHHhHHHh---
Q 028868 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMS--------------TVSSTNFESVFHLSQLAHPLFK--- 125 (202)
Q Consensus 63 ~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~~~~~~~~~~~--- 125 (202)
+++++++++.+++ ++||++|||||.....++.+.+.++|+ ..+++|+.+++.+.+.+.+.+.
T Consensus 84 ~v~~~~~~~~~~~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 84 RCAELVAACYTHW-GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHH-SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHh-CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 9999999999999 799999999999887777776665554 4789999999999999887653
Q ss_pred ---cCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 126 ---ASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 126 ---~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
+...++|++++|.....+.++..+|+++|+|+.+|+|.++.|++++|||||+|+||++.+.
T Consensus 163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~ 226 (284)
T d1e7wa_ 163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 226 (284)
T ss_dssp GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG
T ss_pred HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc
Confidence 3456899999999999999999999999999999999999999999999999999986553
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.3e-36 Score=231.47 Aligned_cols=188 Identities=15% Similarity=0.218 Sum_probs=166.0
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||++ |||+++|+.|+++|++|++++|+++..+.. +++............|+++..++...+.++.+.+ ++
T Consensus 6 K~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 83 (258)
T d1qsga_ 6 KRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW-PK 83 (258)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC-SS
T ss_pred CEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhcc-cc
Confidence 7999999998 899999999999999999999996655444 4544555567888999999999999999999998 79
Q ss_pred ccEEEEcCCCCCCCCC-----CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhh
Q 028868 79 LNILINNAAIAFVKPT-----VDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAY 153 (202)
Q Consensus 79 id~vi~~ag~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~as 153 (202)
+|++||+++....... .....+.|...+++|+.+++.+++.+.|.|++ ++.|+++||..+..+.|+...|++|
T Consensus 84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Ii~iss~~~~~~~~~~~~Y~~s 161 (258)
T d1qsga_ 84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGAERAIPNYNVMGLA 161 (258)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC--CcEEEEecchhhccCCCCcHHHHHH
Confidence 9999999998643332 35677889999999999999999999999865 5689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 154 KGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 154 K~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
|+|+++|+|+++.|++++|||||+|+||+|+|++.....
T Consensus 162 Kaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 200 (258)
T d1qsga_ 162 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK 200 (258)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST
T ss_pred HHHHHHHHHHHHHHhCccCceeecccccccccccccccc
Confidence 999999999999999999999999999999999987543
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.3e-36 Score=239.62 Aligned_cols=186 Identities=18% Similarity=0.163 Sum_probs=156.4
Q ss_pred CEEEEec--CCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc------------CCeEEEE------------
Q 028868 1 MTALVTG--GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK------------GFKVTGS------------ 54 (202)
Q Consensus 1 k~~lItG--as~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~------------~~~v~~~------------ 54 (202)
|++|||| +++|||+++|++|+++|++|++++++............+. .......
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI 82 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGC
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhccc
Confidence 7899999 5579999999999999999999998876554444332211 1112222
Q ss_pred --------EecCCCHHHHHHHHHHHHHHhCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHH
Q 028868 55 --------VCDLSSREQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124 (202)
Q Consensus 55 --------~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 124 (202)
.+|+++.++++++++++.+.+ ++||++|||+|... .+++.+.+.++|+..+++|+.+++.++|+++|+|
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m 161 (329)
T d1uh5a_ 83 DEETKNNKRYNMLQNYTIEDVANLIHQKY-GKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CHHHHTSHHHHTCCCCSHHHHHHHHHHHH-CCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred chhhhhhhhhhhhhHHHHHHHHHHHHHHh-CCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence 236778888999999999999 79999999999764 3578889999999999999999999999999999
Q ss_pred hcCCCCeEEEecCCCCccCCCC-ChhhhhhHHHHHHHHHHHHHHHcc-CCcEEEEeeCCcccCCCcc
Q 028868 125 KASGNGSIVFISSVGGVRGIPS-VSLYGAYKGAMNQLTKNLACEWAK-DNIRTNTVAPWVIKTSMIK 189 (202)
Q Consensus 125 ~~~~~~~iv~vsS~~~~~~~~~-~~~y~asK~a~~~~~~~la~e~~~-~gi~v~~v~pG~v~t~~~~ 189 (202)
++ .|+||++||.++..+.|+ ...|+++|+++++|+|+|+.|+++ .|||||+|+||+|+|+..+
T Consensus 162 ~~--~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~ 226 (329)
T d1uh5a_ 162 KP--QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAAT 226 (329)
T ss_dssp EE--EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGG
T ss_pred cc--ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhh
Confidence 65 589999999999998887 467999999999999999999986 5999999999999996544
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=7.1e-36 Score=228.73 Aligned_cols=179 Identities=25% Similarity=0.265 Sum_probs=155.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|+++ +.+....++|+++......+.....+.. ..+
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~ 67 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTREEDVRRAVARAQEEA--PLF 67 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC------------SSSSEEEECCTTCHHHHHHHHHHHHHHS--CEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------cccceEeeccccchhhhHHHHHhhhccc--ccc
Confidence 89999999999999999999999999999999864 2356778899999999999988887775 456
Q ss_pred EEEEcCCCCC----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHH------hcCCCCeEEEecCCCCccCCCCChhh
Q 028868 81 ILINNAAIAF----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF------KASGNGSIVFISSVGGVRGIPSVSLY 150 (202)
Q Consensus 81 ~vi~~ag~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~------~~~~~~~iv~vsS~~~~~~~~~~~~y 150 (202)
.++.+++... .......+.+.|++++++|+.+.+.+++.+.+.+ .+++.|+||++||..+..+.++...|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y 147 (241)
T d1uaya_ 68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY 147 (241)
T ss_dssp EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence 6666666532 2344567889999999999999999999999985 44557999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchhh
Q 028868 151 GAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEV 193 (202)
Q Consensus 151 ~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~~ 193 (202)
+++|+|+.+|+|+++.|++++|||||+|+||+|+|++..+...
T Consensus 148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~ 190 (241)
T d1uaya_ 148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPE 190 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCH
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhh
Confidence 9999999999999999999999999999999999998865443
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=100.00 E-value=2.2e-33 Score=217.70 Aligned_cols=188 Identities=25% Similarity=0.268 Sum_probs=156.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHHHHhc-CCeEEEEEecCCC----HHHHHHHHHHHHHHh
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE-LDARLHEWKNK-GFKVTGSVCDLSS----REQREKLIETVTSIF 75 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~-~~~~~~~~~~~-~~~v~~~~~Dv~~----~~~i~~~~~~~~~~~ 75 (202)
++|||||++|||+++|++|+++|++|++++|+.++ .+++.+++... +.+......|+.+ ++.+.++++++.+++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF 82 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence 68999999999999999999999999999998655 46666676654 4567776665544 577888889999999
Q ss_pred CCCccEEEEcCCCCCCCCCC-----------CCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-----CCCCeEEEecCCC
Q 028868 76 QGKLNILINNAAIAFVKPTV-----------DITAEDMSTVSSTNFESVFHLSQLAHPLFKA-----SGNGSIVFISSVG 139 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~-----------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-----~~~~~iv~vsS~~ 139 (202)
++||++|||||+....++. +...+.+...+..|+.+.+...+...+.+.. ...+.++.+++..
T Consensus 83 -g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 83 -GRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp -SCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred -CCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 7999999999987655432 2345667788899999999998888877753 2357888899999
Q ss_pred CccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 140 GVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 140 ~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
+..+.|++..|++||+++++++|+++.|++++|||||+|+||+++|++..+
T Consensus 162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~ 212 (266)
T d1mxha_ 162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP 212 (266)
T ss_dssp GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC
T ss_pred ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC
Confidence 999999999999999999999999999999999999999999999987653
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=1.4e-33 Score=219.92 Aligned_cols=188 Identities=19% Similarity=0.256 Sum_probs=153.5
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||+| |||+++|++|+++|++|++++|+++ +.+.++++...+....+..+|++++++++++++++.+.+ ++
T Consensus 6 K~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-g~ 83 (274)
T d2pd4a1 6 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL-GS 83 (274)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-SC
T ss_pred CEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc-CC
Confidence 8999999875 8999999999999999999999854 445566666667778889999999999999999999998 79
Q ss_pred ccEEEEcCCCCCCC----CCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhH
Q 028868 79 LNILINNAAIAFVK----PTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYK 154 (202)
Q Consensus 79 id~vi~~ag~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK 154 (202)
+|++|||+|..... ...+..++.+...+..+..+.....+.+.+.++ ..+.|+++++.+...+.+....|+++|
T Consensus 84 id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~~~~~~~~~~~~~y~asK 161 (274)
T d2pd4a1 84 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLN--NGASVLTLSYLGSTKYMAHYNVMGLAK 161 (274)
T ss_dssp EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred CCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccc--cCcceeeecccccccccccchhhhHHH
Confidence 99999999976433 233345555666666666666666665554432 245677777777788888889999999
Q ss_pred HHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 155 GAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
+++.+++|+++.|++++|||||+|+||+++|++.....
T Consensus 162 ~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~ 199 (274)
T d2pd4a1 162 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA 199 (274)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST
T ss_pred HHHHHHHHhhHHHhcCcCceecccccCcccCccccccC
Confidence 99999999999999999999999999999999886543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=100.00 E-value=6.4e-34 Score=220.31 Aligned_cols=176 Identities=24% Similarity=0.266 Sum_probs=155.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh---hHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ---IELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~---~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
+|+|||||++|||+++|++|+++|+ +|++++|+. +..+...+++...+.++.++.+|++|.++++++++.+.+.
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-- 87 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-- 87 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT--
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc--
Confidence 5899999999999999999999999 688999874 4566777788777889999999999999999999988765
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHH
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGA 156 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a 156 (202)
+++|.++||+|.....++.+.+.++|+..+++|+.+++.+.+.+ ...+.++||++||.++..+.++++.|+++|++
T Consensus 88 ~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~ 163 (259)
T d2fr1a1 88 VPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFSSFASAFGAPGLGGYAPGNAY 163 (259)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHH
T ss_pred ccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeecchhhccCCcccHHHHHHHHh
Confidence 48999999999998889999999999999999999999987764 55567899999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
++.|++.+ ...|+++++|+||++.++
T Consensus 164 l~~la~~~----~~~Gi~v~~I~pg~~~~~ 189 (259)
T d2fr1a1 164 LDGLAQQR----RSDGLPATAVAWGTWAGS 189 (259)
T ss_dssp HHHHHHHH----HHTTCCCEEEEECCBC--
T ss_pred HHHHHHHH----HhCCCCEEECCCCcccCC
Confidence 98877655 456999999999998654
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=100.00 E-value=3.2e-33 Score=217.12 Aligned_cols=186 Identities=19% Similarity=0.205 Sum_probs=158.6
Q ss_pred CEEEEecC--CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC--
Q 028868 1 MTALVTGG--TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-- 76 (202)
Q Consensus 1 k~~lItGa--s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-- 76 (202)
|++||||| ++|||+++|++|+++|++|++++|+.+++.+...+ ..+.+...+.+|++++++++++++.+.+.++
T Consensus 7 K~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~--~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~ 84 (268)
T d2h7ma1 7 KRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD--RLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 84 (268)
T ss_dssp CEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT--TSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHH--HcCCceeeEeeecccccccccccchhhhccccC
Confidence 79999995 57899999999999999999999998766443332 3466788899999999999999999988762
Q ss_pred CCccEEEEcCCCCC-----CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhh
Q 028868 77 GKLNILINNAAIAF-----VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYG 151 (202)
Q Consensus 77 ~~id~vi~~ag~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~ 151 (202)
+++|+++||+|+.. ..++.+.+.++|...+++|+.+.+...+.+.+++.. +.+++++|.....+.|+...|+
T Consensus 85 ~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~p~~~~y~ 161 (268)
T d2h7ma1 85 NKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPSRAMPAYNWMT 161 (268)
T ss_dssp CCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCSSCCTTTHHHH
T ss_pred CCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccc---ccccccccccccccCcccchhh
Confidence 47999999999753 235567889999999999999999999998776643 3455666777788889999999
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccch
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
++|+++.+++|.++.|++++|||||+|+||+|+|++....
T Consensus 162 ~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~ 201 (268)
T d2h7ma1 162 VAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAI 201 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHH
T ss_pred ccccchhhccccchhhhhccCCcceEEecCCCCChhhhhh
Confidence 9999999999999999999999999999999999987543
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=100.00 E-value=1.2e-32 Score=216.77 Aligned_cols=188 Identities=22% Similarity=0.165 Sum_probs=150.3
Q ss_pred CEEEEecCCC--chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc---------C---CeEEEEEec---------
Q 028868 1 MTALVTGGTR--GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK---------G---FKVTGSVCD--------- 57 (202)
Q Consensus 1 k~~lItGas~--giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~---------~---~~v~~~~~D--------- 57 (202)
|++|||||+| |||+++|++|+++|++|++++|++............. + ..-....+|
T Consensus 9 K~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (297)
T d1d7oa_ 9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDV 88 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGS
T ss_pred CEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccc
Confidence 7999999986 9999999999999999999999865443333322111 0 011222333
Q ss_pred -----------CCCHHHHHHHHHHHHHHhCCCccEEEEcCCCCC--CCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHH
Q 028868 58 -----------LSSREQREKLIETVTSIFQGKLNILINNAAIAF--VKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLF 124 (202)
Q Consensus 58 -----------v~~~~~i~~~~~~~~~~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 124 (202)
.++..+++++++++.++| ++||++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.+
T Consensus 89 ~~dv~~~~~~~~~~~~~~~~~~~~~~~~~-G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~ 167 (297)
T d1d7oa_ 89 PEDVKANKRYAGSSNWTVQEAAECVRQDF-GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIM 167 (297)
T ss_dssp CHHHHTSHHHHHCCCCSHHHHHHHHHHHH-SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhhhhhhhhccHHHHHHHHHHHHHHh-CCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHh
Confidence 345566789999999999 89999999999753 4678889999999999999999999999999988
Q ss_pred hcCCCCeEEEecCCCCc-cCCCCChhhhhhHHHHHHHHHHHHHHHc-cCCcEEEEeeCCcccCCCccch
Q 028868 125 KASGNGSIVFISSVGGV-RGIPSVSLYGAYKGAMNQLTKNLACEWA-KDNIRTNTVAPWVIKTSMIKPF 191 (202)
Q Consensus 125 ~~~~~~~iv~vsS~~~~-~~~~~~~~y~asK~a~~~~~~~la~e~~-~~gi~v~~v~pG~v~t~~~~~~ 191 (202)
.++ +.++.+++.+.. ...+....|+++|+++..+++.++.|++ +.|||||+|+||+++|++....
T Consensus 168 ~~~--g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~ 234 (297)
T d1d7oa_ 168 NPG--GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI 234 (297)
T ss_dssp EEE--EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC
T ss_pred hcC--CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhc
Confidence 764 556666665544 3456778899999999999999999996 5799999999999999998643
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.97 E-value=3.4e-30 Score=198.69 Aligned_cols=168 Identities=24% Similarity=0.291 Sum_probs=129.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||++|||+++|++|+++|++|++++|++++ ...|+++++..+....+......+.+|
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 789999999999999999999999999999987532 246999998888877776666546799
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCc-------------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGV------------------- 141 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~------------------- 141 (202)
.+++|||+... .+.+.....+|..+...+.+...+.+.+.....+.++.+....
T Consensus 65 ~lv~~Ag~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 137 (257)
T d1fjha_ 65 GLVLCAGLGPQ-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA 137 (257)
T ss_dssp EEEECCCCCTT-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred EEEEcCCCCCc-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEE
Confidence 99999997532 2346788899999999999999998887665666665554321
Q ss_pred --------c-CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccchh
Q 028868 142 --------R-GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFE 192 (202)
Q Consensus 142 --------~-~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~~~ 192 (202)
. ..++..+|++||+|+++|+|+++.|++++|||||+|+||+|+||+.+...
T Consensus 138 ~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~ 197 (257)
T d1fjha_ 138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGL 197 (257)
T ss_dssp HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------
T ss_pred EEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhc
Confidence 1 12234579999999999999999999999999999999999999986543
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=3.6e-21 Score=154.44 Aligned_cols=174 Identities=17% Similarity=0.058 Sum_probs=128.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-----ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-----~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|+||||||+|.||.+++++|+++|++|++++|... +++....+......++.++.+|++|.+++++++...
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---- 77 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---- 77 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence 78999999999999999999999999999999543 222222222233457999999999999999998863
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GI 144 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~ 144 (202)
.+|+++|.|+...... +.++.+..+++|+.|+.++++++...- ..+..++|++||..-+. +.
T Consensus 78 --~~d~v~h~aa~~~~~~----~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~ 150 (357)
T d1db3a_ 78 --QPDEVYNLGAMSHVAV----SFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPF 150 (357)
T ss_dssp --CCSEEEECCCCCTTTT----TTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred --CCCEEEEeecccccch----hhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence 6899999999865432 334566788999999999999874321 12345799999865321 12
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+...|+.||.+.+.+++.++..+ |+.+..+.|+.+..|..
T Consensus 151 ~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~ 191 (357)
T d1db3a_ 151 YPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRR 191 (357)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTS
T ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCC
Confidence 246789999999999999998875 68999999998888743
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=2.7e-20 Score=148.09 Aligned_cols=168 Identities=18% Similarity=0.139 Sum_probs=129.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH---HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE---LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~---~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|++|||||+|.||++++++|+++|++|++++|.... .....+.. ...++.++++|++|.+.+.++++. .
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~------~ 72 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHD------H 72 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHH------T
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh--cCCCCEEEEeecCCHHHHHHHHhc------c
Confidence 679999999999999999999999999999863222 22222222 235788999999999998888886 4
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC------------C
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI------------P 145 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~------------~ 145 (202)
++|+|||.|+..... .+.++.++.+++|+.|+..+++++ ++.+..++|++||...+.+. .
T Consensus 73 ~~d~ViHlAa~~~~~----~~~~~~~~~~~~Nv~gt~nlL~~~----~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~ 144 (338)
T d1udca_ 73 AIDTVIHFAGLKAVG----ESVQKPLEYYDNNVNGTLRLISAM----RAANVKNFIFSSSATVYGDQPKIPYVESFPTGT 144 (338)
T ss_dssp TCSEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred CCCEEEECCCccchh----hHHhCHHHHHHhHHHHHHHHHHHH----HHhCCCEEEecCcceEEccccccccccccccCC
Confidence 689999999964321 233456688999999999999988 44456789999987644321 2
Q ss_pred CChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 146 SVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 146 ~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
+...|+.+|.+.+.+.+....+. .++.+..+.|+.+..+
T Consensus 145 p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~ 183 (338)
T d1udca_ 145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGA 183 (338)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECC
T ss_pred CcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEec
Confidence 46689999999999999888774 4788888888888765
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=5.3e-19 Score=140.93 Aligned_cols=168 Identities=22% Similarity=0.155 Sum_probs=125.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH---HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE---LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~---~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+||||||+|.||++++++|+++|++|+++++.... .....+.+ ...++.++.+|++|.++++.++.. .
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~------~ 73 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKE------Y 73 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHH------S
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhc------c
Confidence 789999999999999999999999999998763211 11112222 234688899999999999888875 4
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--------------
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------- 143 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------- 143 (202)
++|+|||.|+..... ...+.......+|+.|+..+++++ ++.+..+++++||...+..
T Consensus 74 ~~d~VihlAa~~~~~----~~~~~~~~~~~~N~~~t~~ll~~~----~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~ 145 (347)
T d1z45a2 74 KIDSVIHFAGLKAVG----ESTQIPLRYYHNNILGTVVLLELM----QQYNVSKFVFSSSATVYGDATRFPNMIPIPEEC 145 (347)
T ss_dssp CCCEEEECCSCCCHH----HHHHSHHHHHHHHHHHHHHHHHHH----HHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTS
T ss_pred CCCEEEEcccccccc----ccccCcccccccchhhhHHHHHHH----HhcccceEEeecceeeecCcccCCCCCcccccc
Confidence 699999999975321 133445678889999999999988 4445568999999664421
Q ss_pred -CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 144 -IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 144 -~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
..+...|+.+|.+.+.+.+.+.... ..++.+..+.|+.+..
T Consensus 146 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g 187 (347)
T d1z45a2 146 PLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIG 187 (347)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEEC
T ss_pred CCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEe
Confidence 1245679999999999999887664 3467777777766654
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.80 E-value=2.4e-21 Score=142.70 Aligned_cols=148 Identities=15% Similarity=0.085 Sum_probs=108.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||++|||+++|++|+++|++|++++|+.++++...+++... ..+....+|+++.+++++++ +++|
T Consensus 24 K~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~--------~~iD 94 (191)
T d1luaa1 24 KKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAV--------KGAH 94 (191)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHT--------TTCS
T ss_pred CEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc-cchhhhhhhcccHHHHHHHh--------cCcC
Confidence 79999999999999999999999999999999999999988887653 23567889999988876553 5789
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-CCCChhhhhhHHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-IPSVSLYGAYKGAMNQ 159 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-~~~~~~y~asK~a~~~ 159 (202)
+||||+|.. +...+.++|+..+++|+.+.++....+.+.+... ......+++.....+ ..+...|.++|+++..
T Consensus 95 ilin~Ag~g----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~~ 169 (191)
T d1luaa1 95 FVFTAGAIG----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDA-TDKGKEYGGKRAFGALGIGGLKLKLHRACIAK 169 (191)
T ss_dssp EEEECCCTT----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCT-TCEEEEETTEEEECHHHHHHHHHHHHHHHHHH
T ss_pred eeeecCccc----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhh-ccCcEEecceEEEeccCcCcHHHHHHHHHHHH
Confidence 999999963 3346899999999999888776554433222211 122222222222211 1233569999999887
Q ss_pred HHH
Q 028868 160 LTK 162 (202)
Q Consensus 160 ~~~ 162 (202)
+++
T Consensus 170 l~~ 172 (191)
T d1luaa1 170 LFE 172 (191)
T ss_dssp HTS
T ss_pred HHh
Confidence 765
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.80 E-value=3e-18 Score=138.62 Aligned_cols=174 Identities=17% Similarity=0.160 Sum_probs=128.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh----------------HHHHHHHHHHh-cCCeEEEEEecCCCHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI----------------ELDARLHEWKN-KGFKVTGSVCDLSSREQ 63 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~----------------~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~ 63 (202)
|+||||||+|.||.+++++|+++|+.|+++|.-.. ........... .+.++.++.+|++|.+.
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 81 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF 81 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence 68999999999999999999999999999873211 11111222211 24578999999999999
Q ss_pred HHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCcc
Q 028868 64 REKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVR 142 (202)
Q Consensus 64 i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~ 142 (202)
++++++.. ++|+|+|.|+.... +....+.+.....+++|+.|+.++++++ ++.+ ...+++.||.....
T Consensus 82 l~~~~~~~------~~d~ViHlAa~~~~-~~s~~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~~i~~ss~~~~~ 150 (393)
T d1i24a_ 82 LAESFKSF------EPDSVVHFGEQRSA-PYSMIDRSRAVYTQHNNVIGTLNVLFAI----KEFGEECHLVKLGTMGEYG 150 (393)
T ss_dssp HHHHHHHH------CCSEEEECCSCCCH-HHHTSCHHHHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEECCGGGGC
T ss_pred HHHHHHhh------cchheecccccccc-ccccccccccccccccccccccHHHHHH----HHhccccceeecccccccc
Confidence 99988863 68999999986432 2223456777788999999999999887 3332 34566666654321
Q ss_pred ------------------------CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 143 ------------------------GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 143 ------------------------~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+..+...|+.+|.+.+.+++.+..++ ++.+..+.|+.+..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~~ 217 (393)
T d1i24a_ 151 TPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT 217 (393)
T ss_dssp CCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred ccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCCc
Confidence 11234579999999999999887765 69999999998887643
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.79 E-value=2.1e-18 Score=137.29 Aligned_cols=168 Identities=19% Similarity=0.162 Sum_probs=127.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN--KGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+||||||+|.||.+++++|+++|++|+++.|+.++.....+.... .......+..|++|.+++.++++ .
T Consensus 12 k~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~--------~ 83 (342)
T d1y1pa1 12 SLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK--------G 83 (342)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT--------T
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc--------c
Confidence 6899999999999999999999999999999998776665544322 24456677789999887655443 5
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCccC-C------------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVRG-I------------ 144 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~~-~------------ 144 (202)
.|.++|+++.... ..+ ....+..|+.|+.++++.+ .+. ...++|++||..+... .
T Consensus 84 ~~~v~~~a~~~~~----~~~---~~~~~~~nv~gt~~ll~~~----~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~ 152 (342)
T d1y1pa1 84 AAGVAHIASVVSF----SNK---YDEVVTPAIGGTLNALRAA----AATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKS 152 (342)
T ss_dssp CSEEEECCCCCSC----CSC---HHHHHHHHHHHHHHHHHHH----HTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTC
T ss_pred chhhhhhcccccc----ccc---ccccccchhhhHHHHHHhh----hcccccccccccccceeeccCCCCCCCccccccc
Confidence 7999999996432 122 3456778999999998887 333 3679999999753221 1
Q ss_pred ------------------CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 ------------------PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ------------------~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+...|+.+|.+.+.+++.+.+... .++++.+++|+.+..|..
T Consensus 153 ~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~ 213 (342)
T d1y1pa1 153 WNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIF 213 (342)
T ss_dssp CCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCS
T ss_pred cccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCC
Confidence 1234699999999999999988874 568999999998877644
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.78 E-value=6.3e-19 Score=141.46 Aligned_cols=174 Identities=17% Similarity=0.129 Sum_probs=129.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEE-EEeCChhHH-HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVH-TCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi-~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+||||||+|.||++++++|++.|++|+ .+++..... ....+.+ ....++.++.+|++|.+.+.++++. ..
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~------~~ 73 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQ------YQ 73 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHH------HC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHh------CC
Confidence 6899999999999999999999999754 455432111 1111111 1234689999999999999888875 36
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-----CCCeEEEecCCCCccC----------
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-----GNGSIVFISSVGGVRG---------- 143 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~iv~vsS~~~~~~---------- 143 (202)
+|+|||+|+..... .+.++..+.+++|+.|+..+++.+...-... +..++|++||...+..
T Consensus 74 ~d~VihlAa~~~~~----~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~ 149 (361)
T d1kewa_ 74 PDAVMHLAAESHVD----RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS 149 (361)
T ss_dssp CSEEEECCSCCCHH----HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred CCEEEECccccchh----hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence 89999999964321 2334556788999999999999987654321 2468999999764421
Q ss_pred -----------CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 144 -----------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 144 -----------~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
..+...|+.||.+.+.+++.++..+ |+.+.++.|+.+..|..
T Consensus 150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~ 202 (361)
T d1kewa_ 150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH 202 (361)
T ss_dssp SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCC
Confidence 1235679999999999999998775 69999999999988754
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=2.5e-18 Score=136.60 Aligned_cols=172 Identities=17% Similarity=0.042 Sum_probs=125.2
Q ss_pred CEE-EEecCCCchHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTA-LVTGGTRGIGHATVEELARFGAIVHTCSRNQI-----ELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~-lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-----~~~~~~~~~~-~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|+| |||||+|.||.+++++|+++|++|++++|..+ ++........ ....++.++.+|++|.+.+..++..
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--- 77 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE--- 77 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH---
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh---
Confidence 455 99999999999999999999999999998643 1222111111 1134789999999999999988876
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR----------- 142 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~----------- 142 (202)
..+++++|.++..... ...+.....+++|+.|+.++++++..+-.. +..++|++||.+-+.
T Consensus 78 ---~~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~-~~~~~i~~SS~~vyg~~~~~~~~E~~ 149 (347)
T d1t2aa_ 78 ---VKPTEIYNLGAQSHVK----ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-NSVKFYQASTSELYGKVQEIPQKETT 149 (347)
T ss_dssp ---HCCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred ---cccceeeeeeeccccc----hhhccchhhhhhHHHHHHHHHHHHHHcCCC-CCcEEEEecchheecCCCCCCCCCCC
Confidence 3678889988864322 234555667889999999999887443221 235899999865321
Q ss_pred CCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 143 GIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 143 ~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
+..+...|+.||.+.+.+++.+...+ ++.+..+.|+.+..|
T Consensus 150 ~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp 190 (347)
T d1t2aa_ 150 PFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESP 190 (347)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECT
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCC
Confidence 12245689999999999999988775 688888998877765
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.77 E-value=1.8e-18 Score=136.06 Aligned_cols=169 Identities=19% Similarity=0.092 Sum_probs=124.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~-~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+||||||+|.||++++++|+++|++|+.++|...... ..++.+. ...++.++.+|++|.+.+.+.+.. ...
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~------~~~ 73 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIK------AQP 73 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHH------HCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhcc------ccc
Confidence 79999999999999999999999999999998653221 2222221 234689999999999998887776 357
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCCCccC------------CCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVGGVRG------------IPS 146 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~------------~~~ 146 (202)
++++|+++...... ..++....++.|+.|+.+++.++ ++.+ ..++++.||.. ..+ ..+
T Consensus 74 ~~~~~~a~~~~~~~----~~~~~~~~~~~n~~g~~~~l~~~----~~~~~~~~~i~~Ss~~-~~~~~~~~~~~E~~~~~p 144 (321)
T d1rpna_ 74 QEVYNLAAQSFVGA----SWNQPVTTGVVDGLGVTHLLEAI----RQFSPETRFYQASTSE-MFGLIQAERQDENTPFYP 144 (321)
T ss_dssp SEEEECCSCCCHHH----HTTSHHHHHHHHTHHHHHHHHHH----HHHCTTSEEEEEEEGG-GGCSCSSSSBCTTSCCCC
T ss_pred cccccccccccccc----cccchHHHHhhhhhchHHHHHHH----HHhCCCcccccccchh-hcCcccCCCCCCCCCccc
Confidence 88888887643221 22345678889999999998887 4333 34566666643 321 225
Q ss_pred ChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 147 VSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 147 ~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
...|+.+|.+.+.+.+.+..++ ++.+..+.|+.+..|..
T Consensus 145 ~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~ 183 (321)
T d1rpna_ 145 RSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLR 183 (321)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTS
T ss_pred cChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCc
Confidence 6789999999999999988775 58888888888777643
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.77 E-value=5.6e-18 Score=134.09 Aligned_cols=175 Identities=18% Similarity=0.048 Sum_probs=128.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-----HHHHHHHHHHh-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-----ELDARLHEWKN-KGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-----~~~~~~~~~~~-~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++|||||||.||.+++++|+++|++|+.++|..+ +.......... ....+.++.+|+++.+++...++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~---- 77 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV---- 77 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH----
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh----
Confidence 78999999999999999999999999999998532 22222211111 134688999999999998888875
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCCCcc----------C
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVGGVR----------G 143 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~~~~----------~ 143 (202)
.++|+|||.|+..... ...++....++.|..++..++.++.....+. ...++++.||..... +
T Consensus 78 --~~~D~Vih~Aa~~~~~----~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~ 151 (339)
T d1n7ha_ 78 --IKPDEVYNLAAQSHVA----VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP 151 (339)
T ss_dssp --HCCSEEEECCSCCCHH----HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred --hccchhhhcccccccc----ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence 3789999999974321 2335566788899999999988886544432 234556655543221 1
Q ss_pred CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 144 IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 144 ~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
..+...|+.+|.+.+.+++.+...+ |+.+..+.|+.+..|..
T Consensus 152 ~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~ 193 (339)
T d1n7ha_ 152 FHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRR 193 (339)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTS
T ss_pred CCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCC
Confidence 2256789999999999999988775 69999999998887653
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=1.5e-17 Score=132.17 Aligned_cols=168 Identities=21% Similarity=0.180 Sum_probs=126.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC------hh---HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN------QI---ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~------~~---~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
|+||||||+|.||.+++++|+++|++|+++++. .. ...+..+.+ ...++.++++|++|.+.+.+++..
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~- 79 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKK- 79 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHH-
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh--cCCCcEEEEeeccccccccccccc-
Confidence 689999999999999999999999999998641 11 112222222 245789999999999998888775
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--------
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------- 143 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------- 143 (202)
..+++++|.|+..... .+.++..+.++.|+.|+..+++++ ++.+..+++++||......
T Consensus 80 -----~~~~~i~h~Aa~~~~~----~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~v~~~i~~ss~~~~~~~~~~~~~~ 146 (346)
T d1ek6a_ 80 -----YSFMAVIHFAGLKAVG----ESVQKPLDYYRVNLTGTIQLLEIM----KAHGVKNLVFSSSATVYGNPQYLPLDE 146 (346)
T ss_dssp -----CCEEEEEECCSCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred -----cccccccccccccCcH----hhHhCHHHHHHhhhcccccccchh----hhcCcccccccccceeeeccccccccc
Confidence 5789999999975321 234455678899999999998887 5555678999888754422
Q ss_pred ----CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 144 ----IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 144 ----~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
......|+.+|.+.+..++.++.. ..++....+.|+.+..+
T Consensus 147 ~~~~~~~~~~Y~~~k~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~ 191 (346)
T d1ek6a_ 147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGA 191 (346)
T ss_dssp TSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECC
T ss_pred cccccccCChHHHHHHHHHHHHHHHHHh--ccCCceEEEeecceecc
Confidence 124457999999999999887654 34788888888777654
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.75 E-value=3.1e-17 Score=129.29 Aligned_cols=153 Identities=17% Similarity=0.106 Sum_probs=113.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh-HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI-ELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~-~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+||||||+|.||++++++|+++|++|+++++-.. ........+. ...++.++.+|++|.+++.++++. .++|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~~~l~~~~~~------~~~d 74 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITK------YMPD 74 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCHHHHHHHHHh------cCCc
Confidence 6899999999999999999999999999875221 1222233332 235688999999999999888875 3689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC----------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---------------- 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------- 144 (202)
+|||+|+..... ...++....+++|+.|+.++++++ .+.+..+.++.||.......
T Consensus 75 ~Vih~aa~~~~~----~~~~~~~~~~~~Nv~gt~nll~~~----~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~ 146 (338)
T d1orra_ 75 SCFHLAGQVAMT----TSIDNPCMDFEINVGGTLNLLEAV----RQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV 146 (338)
T ss_dssp EEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred eEEeeccccccc----ccccChHHHHHHHHHHHHHHHHhh----hccccccccccccccccccccccccccccccccccc
Confidence 999999975321 233456788999999999999887 44445566666665543322
Q ss_pred ------------CCChhhhhhHHHHHHHHHHHHHHHc
Q 028868 145 ------------PSVSLYGAYKGAMNQLTKNLACEWA 169 (202)
Q Consensus 145 ------------~~~~~y~asK~a~~~~~~~la~e~~ 169 (202)
.+...|+.+|...+.+.......+.
T Consensus 147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~ 183 (338)
T d1orra_ 147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG 183 (338)
T ss_dssp TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccCcccCCccccccccccccchhhhhhhhhhhccC
Confidence 1356799999999999998888874
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=1.2e-17 Score=130.99 Aligned_cols=151 Identities=13% Similarity=0.087 Sum_probs=118.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+||||||+|.||++++++|+++|+.|+++++.. .+|+.+.+.+.+++.. ..+|
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~------~~~d 56 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFAS------ERID 56 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHH------HCCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhh------cCCC
Confidence 6799999999999999999999999888776542 1699999888887764 3689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC----------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---------------- 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------- 144 (202)
.++|.|+..... .....+..+.++.|+.|+.++++++ .+.+..++|++||.+.+.+.
T Consensus 57 ~v~~~a~~~~~~---~~~~~~~~~~~~~Nv~gt~~ll~~a----~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~ 129 (315)
T d1e6ua_ 57 QVYLAAAKVGGI---VANNTYPADFIYQNMMIESNIIHAA----HQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLE 129 (315)
T ss_dssp EEEECCCCCCCH---HHHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCC
T ss_pred EEEEcchhcccc---ccchhhHHHHHHHHHHHHHHHHHHH----HHcCCCEEEEECCceEcCCCCCCCccCCccccCCCC
Confidence 999999764321 1233445567889999999998887 44556789999998754321
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
++...|+.+|.+.+.+++.+..+. |+++..+.|+.|..|.
T Consensus 130 ~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~ 169 (315)
T d1e6ua_ 130 PTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPH 169 (315)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTT
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCC
Confidence 123579999999999999998775 7999999999998764
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.75 E-value=1.9e-17 Score=131.37 Aligned_cols=168 Identities=15% Similarity=0.096 Sum_probs=125.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh----HHHHHHHHHH-hcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI----ELDARLHEWK-NKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~----~~~~~~~~~~-~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++|||||+|.||++++++|.++|++|++++|... .......... ....++.++..|+.|........
T Consensus 17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~------- 89 (341)
T d1sb8a_ 17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC------- 89 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH-------
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc-------
Confidence 78999999999999999999999999999986322 2222221111 11246889999999977644332
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------C
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------I 144 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~ 144 (202)
...+.++|.+...... .+.++....+++|+.|+.++++++ .+.+..++|++||...+.. .
T Consensus 90 -~~~~~v~~~~a~~~~~----~~~~~~~~~~~~Nv~gt~~ll~~~----~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~ 160 (341)
T d1sb8a_ 90 -AGVDYVLHQAALGSVP----RSINDPITSNATNIDGFLNMLIAA----RDAKVQSFTYAASSSTYGDHPGLPKVEDTIG 160 (341)
T ss_dssp -TTCSEEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHH----HHTTCSEEEEEEEGGGGTTCCCSSBCTTCCC
T ss_pred -cccccccccccccccc----ccccCccchhheeehhHHHHHHHH----HhcCCceEEEcccceeeCCCCCCCccCCCCC
Confidence 3578888888754321 245667788999999999999988 4455679999999875432 2
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+...|+.+|.+.+.+++.++... ++++..+.|+.+..+.
T Consensus 161 ~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~ 200 (341)
T d1sb8a_ 161 KPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRR 200 (341)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTT
T ss_pred CCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccC
Confidence 245789999999999999998775 6888999998887654
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.73 E-value=1.7e-16 Score=127.80 Aligned_cols=174 Identities=17% Similarity=0.144 Sum_probs=129.4
Q ss_pred CEEEEecCCCchHHHHHHHHHH-CCCEEEEEeC---------ChhHHHHHHHHHHhc--------CCeEEEEEecCCCHH
Q 028868 1 MTALVTGGTRGIGHATVEELAR-FGAIVHTCSR---------NQIELDARLHEWKNK--------GFKVTGSVCDLSSRE 62 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~-~g~~Vi~~~r---------~~~~~~~~~~~~~~~--------~~~v~~~~~Dv~~~~ 62 (202)
|+||||||+|.||++++++|++ .|++|+++++ ..+..+.....+... ...+.++.+|++|.+
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~ 82 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED 82 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence 6899999999999999999996 6899999874 112223333333221 345788999999999
Q ss_pred HHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc
Q 028868 63 QREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR 142 (202)
Q Consensus 63 ~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 142 (202)
.++++++.. .++|+|+|.|+..... ...++....+++|+.++..+++++ ++.+..++++++|.....
T Consensus 83 ~l~~~~~~~-----~~~d~ViH~Aa~~~~~----~~~~~~~~~~~~N~~~t~~~l~~~----~~~~~~~~~~~~s~~~~~ 149 (383)
T d1gy8a_ 83 FLNGVFTRH-----GPIDAVVHMCAFLAVG----ESVRDPLKYYDNNVVGILRLLQAM----LLHKCDKIIFSSSAAIFG 149 (383)
T ss_dssp HHHHHHHHS-----CCCCEEEECCCCCCHH----HHHHCHHHHHHHHHHHHHHHHHHH----HHTTCCEEEEEEEGGGTB
T ss_pred Hhhhhhhcc-----ceeehhhccccccccc----ccccccccccccccccccccchhh----hccCCccccccccccccc
Confidence 988888753 5789999999975432 233445667889999999999887 445556777777665432
Q ss_pred C------------------CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCccc
Q 028868 143 G------------------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKP 190 (202)
Q Consensus 143 ~------------------~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~~~ 190 (202)
. ..+...|+.+|.+.+.+++.+...+ |+.+.++.|+.+..|....
T Consensus 150 ~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~~~ 212 (383)
T d1gy8a_ 150 NPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHEDG 212 (383)
T ss_dssp SCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCTTS
T ss_pred ccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCccc
Confidence 1 2246789999999999999887765 6999999999987765543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.72 E-value=6.8e-17 Score=128.54 Aligned_cols=173 Identities=17% Similarity=0.118 Sum_probs=128.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+||||||+|.||.+++++|+++|++|++++|+..+.....+.. .....+.++.+|++|.+.+.++++. ..+|
T Consensus 9 KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~-~~~~~i~~~~~Dl~d~~~l~~~~~~------~~~~ 81 (356)
T d1rkxa_ 9 KRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETA-RVADGMQSEIGDIRDQNKLLESIRE------FQPE 81 (356)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHT-TTTTTSEEEECCTTCHHHHHHHHHH------HCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhh-hcccCCeEEEeeccChHhhhhhhhh------chhh
Confidence 78999999999999999999999999999999876544443332 1233588999999999998887775 4789
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc------------CCCCCh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR------------GIPSVS 148 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~------------~~~~~~ 148 (202)
+++|.|+..... .+.+.....+++|+.|+..+++++... .....+++.|+..... +..+..
T Consensus 82 ~v~~~aa~~~~~----~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~ 154 (356)
T d1rkxa_ 82 IVFHMAAQPLVR----LSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYD 154 (356)
T ss_dssp EEEECCSCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSS
T ss_pred hhhhhhcccccc----ccccCCccccccccccchhhhhhhhcc---ccccccccccccccccccccccccccccccCCCC
Confidence 999999864321 235567788899999999999887321 2233455544433222 122456
Q ss_pred hhhhhHHHHHHHHHHHHHHHc------cCCcEEEEeeCCcccCCC
Q 028868 149 LYGAYKGAMNQLTKNLACEWA------KDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 149 ~y~asK~a~~~~~~~la~e~~------~~gi~v~~v~pG~v~t~~ 187 (202)
.|+.+|...+.+.+.++.++. ..++.+..+.|+.+..|.
T Consensus 155 ~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~ 199 (356)
T d1rkxa_ 155 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGG 199 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTT
T ss_pred ccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCC
Confidence 799999999999998888753 347889999998877553
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.70 E-value=1.1e-16 Score=127.87 Aligned_cols=163 Identities=18% Similarity=0.100 Sum_probs=122.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+||||||+|.||++++++|.++|++|+++++...... ...-....+...|+.+.+.+.++++ .+|
T Consensus 16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~--------~~d 81 (363)
T d2c5aa1 16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVTE--------GVD 81 (363)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHHT--------TCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHhh--------cCC
Confidence 57999999999999999999999999999987532210 0111235677789998776555432 579
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC----------------
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI---------------- 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---------------- 144 (202)
.|||.|+....... ..+.....+..|+.++..++.++ .+.+..++|++||.......
T Consensus 82 ~Vih~a~~~~~~~~---~~~~~~~~~~~n~~gt~~ll~~~----~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~ 154 (363)
T d2c5aa1 82 HVFNLAADMGGMGF---IQSNHSVIMYNNTMISFNMIEAA----RINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW 154 (363)
T ss_dssp EEEECCCCCCCHHH---HTTCHHHHHHHHHHHHHHHHHHH----HHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred eEeecccccccccc---cccccccccccccchhhHHHHhH----HhhCccccccccccccccccccccccccccccccCC
Confidence 99999986533211 22345677889999999998887 55556799999997654321
Q ss_pred --CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 145 --PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 145 --~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+...|+.+|.+.+.+++.+..++ |+.+..+.|+.+..+.
T Consensus 155 ~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~ 196 (363)
T d2c5aa1 155 PAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPF 196 (363)
T ss_dssp SBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTT
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccC
Confidence 135679999999999999888776 6999999999998764
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=2.8e-17 Score=129.15 Aligned_cols=162 Identities=14% Similarity=0.086 Sum_probs=115.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+||||||+|.||++++++|+++|++|+++++......+..... ....++.....|+.+. .+ .++|
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~------------~~-~~~d 67 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHW-IGHENFELINHDVVEP------------LY-IEVD 67 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGG-TTCTTEEEEECCTTSC------------CC-CCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHh-cCCCceEEEehHHHHH------------HH-cCCC
Confidence 78999999999999999999999999999986332111111111 1122345555554321 12 3689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC----------------C
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG----------------I 144 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----------------~ 144 (202)
+|||.|+...... ..++..+.+++|+.|+..+++++ ++.+ .++|++||.+.+.. .
T Consensus 68 ~VihlAa~~~~~~----~~~~~~~~~~~Nv~g~~~ll~~~----~~~~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~ 138 (312)
T d2b69a1 68 QIYHLASPASPPN----YMYNPIKTLKTNTIGTLNMLGLA----KRVG-ARLLLASTSEVYGDPEVHPQSEDYWGHVNPI 138 (312)
T ss_dssp EEEECCSCCSHHH----HTTCHHHHHHHHHHHHHHHHHHH----HHHT-CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSS
T ss_pred EEEECcccCCchh----HHhCHHHHHHHHHHHHHHHHHHH----HHcC-CcEEEEEChheecCCCCCCCCccccCCCCCC
Confidence 9999999754221 11334677889999999999887 3333 48999999654321 1
Q ss_pred CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+...|+.+|.+.+.+++.++.++ |+.+..+.|+.+..|..
T Consensus 139 ~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~ 179 (312)
T d2b69a1 139 GPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRM 179 (312)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTC
T ss_pred CCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCC
Confidence 246789999999999999998876 69999999999987643
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.70 E-value=1.8e-16 Score=125.59 Aligned_cols=164 Identities=15% Similarity=0.069 Sum_probs=121.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+||||||+|.||++++++|+++| ++|+++++......... ...++.++++|+++.+++.+.+. ..+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~-------~~~ 68 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHV-------KKC 68 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHH-------HHC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHH-------hCC
Confidence 689999999999999999999999 48999988654433222 13469999999998777555332 247
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC---------------
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--------------- 144 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------------- 144 (202)
|.|||+|+..... ...++....++.|+.|+.++++++ .+.+ .+.+++||...+...
T Consensus 69 d~Vih~a~~~~~~----~~~~~~~~~~~~nv~gt~~ll~~~----~~~~-~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~ 139 (342)
T d2blla1 69 DVVLPLVAIATPI----EYTRNPLRVFELDFEENLRIIRYC----VKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVG 139 (342)
T ss_dssp SEEEECBCCCCHH----HHHHSHHHHHHHHTHHHHHHHHHH----HHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred Ccccccccccccc----ccccCCcccccccccccccccccc----cccc-cccccccccccccccccccccccccccccc
Confidence 9999999975432 133445677889999999999987 4433 456677776543221
Q ss_pred ---CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 ---PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 ---~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+...|+.||.+.+.+.+.++..+ |+.+..+.|..+..+..
T Consensus 140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~ 183 (342)
T d2blla1 140 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRL 183 (342)
T ss_dssp CTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSC
T ss_pred ccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccc
Confidence 134679999999999999998886 68888888888876543
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.70 E-value=6.6e-16 Score=114.19 Aligned_cols=149 Identities=15% Similarity=0.071 Sum_probs=106.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++||||||+||++++++|+++|++|.++.|+++++... ....+.++.+|++|.+++.+++. ..|
T Consensus 4 kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~--------~~d 69 (205)
T d1hdoa_ 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA--------GQD 69 (205)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT--------TCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc--------CCC
Confidence 6899999999999999999999999999999998775322 12457889999999988776654 479
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC----CChhhhhhHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP----SVSLYGAYKGA 156 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~----~~~~y~asK~a 156 (202)
.||+++|....... . +++..+..+++++ +++.+..++|++||.......+ ....|...|..
T Consensus 70 ~vi~~~g~~~~~~~--~---------~~~~~~~~~l~~a----a~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~ 134 (205)
T d1hdoa_ 70 AVIVLLGTRNDLSP--T---------TVMSEGARNIVAA----MKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR 134 (205)
T ss_dssp EEEECCCCTTCCSC--C---------CHHHHHHHHHHHH----HHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHH
T ss_pred EEEEEeccCCchhh--h---------hhhHHHHHHHHHH----HHhcCCCeEEEEeeeeccCCCccccccccccchHHHH
Confidence 99999996432211 1 1334444455444 4666678999999876543322 22345555555
Q ss_pred HHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 157 MNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 157 ~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
.+.+. ...|++...|.||++..
T Consensus 135 ~e~~l-------~~~~~~~tiirp~~~~~ 156 (205)
T d1hdoa_ 135 MHKVL-------RESGLKYVAVMPPHIGD 156 (205)
T ss_dssp HHHHH-------HHTCSEEEEECCSEEEC
T ss_pred HHHHH-------HhcCCceEEEecceecC
Confidence 55443 34689999999998864
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.68 E-value=2e-16 Score=124.54 Aligned_cols=168 Identities=18% Similarity=0.118 Sum_probs=122.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEE------EEEeCChhHH-HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIV------HTCSRNQIEL-DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~V------i~~~r~~~~~-~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|+||||||+|.||++++++|+++|+.| +..++..... ......+ ....++.++..|.++.......
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~------ 73 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARE------ 73 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHH------
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhcc------
Confidence 689999999999999999999999744 4444321110 0111111 2245689999999997765532
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCC---------
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGI--------- 144 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~--------- 144 (202)
. ..+|.++|.|+..... .........+++|+.|+..+++++ .+.+..++|++||.+.+.+.
T Consensus 74 -~-~~~d~vi~~a~~~~~~----~~~~~~~~~~~~N~~gt~~ll~~~----~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~ 143 (322)
T d1r6da_ 74 -L-RGVDAIVHFAAESHVD----RSIAGASVFTETNVQGTQTLLQCA----VDAGVGRVVHVSTNQVYGSIDSGSWTESS 143 (322)
T ss_dssp -T-TTCCEEEECCSCCCHH----HHHHCCHHHHHHHTHHHHHHHHHH----HHTTCCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred -c-cccceEEeeccccccc----ccccchHHHhhhhHHHHHHHHHHH----HHcCCceEEEeecceeecCCCCCCCCCCC
Confidence 1 4689999999875322 234455677789999999999988 44556789999998654322
Q ss_pred --CCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 145 --PSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 145 --~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
.+...|+.+|.+.+.+++.+++++ |+.+..+.|+.+..|..
T Consensus 144 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~ 186 (322)
T d1r6da_ 144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQ 186 (322)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCC
Confidence 245689999999999999998875 69999999999987643
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.68 E-value=8.4e-17 Score=127.96 Aligned_cols=166 Identities=20% Similarity=0.144 Sum_probs=117.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEE--EEEeCChhH-HHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIV--HTCSRNQIE-LDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~V--i~~~r~~~~-~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+||||||+|.||.+++++|+++|+.| +..++.... .....+. -.+.++.++.+|+.|.+.+..++.
T Consensus 3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~--~~~~~i~~~~~Di~d~~~~~~~~~-------- 72 (346)
T d1oc2a_ 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEA--ILGDRVELVVGDIADAELVDKLAA-------- 72 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGG--GCSSSEEEEECCTTCHHHHHHHHT--------
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHH--hhcCCeEEEEccCCCHHHHHHHHh--------
Confidence 789999999999999999999999854 444421111 0111111 124578999999999888777653
Q ss_pred CccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--------------
Q 028868 78 KLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-------------- 143 (202)
Q Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-------------- 143 (202)
..+.++|.|+...... ...+..+.+++|+.|+.+++..+ ...+ .+++++||...+..
T Consensus 73 ~~~~v~~~a~~~~~~~----~~~~~~~~~~~N~~g~~nll~~~----~~~~-~k~i~~ss~~vyg~~~~~~~~~~~~~~~ 143 (346)
T d1oc2a_ 73 KADAIVHYAAESHNDN----SLNDPSPFIHTNFIGTYTLLEAA----RKYD-IRFHHVSTDEVYGDLPLREDLPGHGEGP 143 (346)
T ss_dssp TCSEEEECCSCCCHHH----HHHCCHHHHHHHTHHHHHHHHHH----HHHT-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred hhhhhhhhhhcccccc----hhhCcccceeeehHhHHhhhhhh----cccc-ccccccccceEecccCccccccccccCc
Confidence 4577899888653321 22344577889999999998876 3222 46777777653311
Q ss_pred ---------CCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 144 ---------IPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 144 ---------~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
..+...|+.+|.+.+.+++.+..++ |+++..+.|+.+..|..
T Consensus 144 ~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~ 194 (346)
T d1oc2a_ 144 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQ 194 (346)
T ss_dssp TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTC
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCC
Confidence 1134679999999999999988775 79999999999987643
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=5.1e-15 Score=111.39 Aligned_cols=154 Identities=18% Similarity=0.211 Sum_probs=111.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|+||||||||.||++++++|+++|. +|++++|++.+... ....++....+|+.+.+++. +.+ ..
T Consensus 15 k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~-------~~~-~~ 80 (232)
T d2bkaa1 15 KSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYA-------SAF-QG 80 (232)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGG-------GGG-SS
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeeccccccccc-------ccc-cc
Confidence 6899999999999999999999996 89999997644322 11234666667877654432 233 45
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
.|.++|++|... .........++|+.++..+++.+ .+.+..++|++|+....... ...|+.+|...+
T Consensus 81 ~d~vi~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~fi~~Ss~~~~~~~--~~~Y~~~K~~~E 147 (232)
T d2bkaa1 81 HDVGFCCLGTTR-------GKAGAEGFVRVDRDYVLKSAELA----KAGGCKHFNLLSSKGADKSS--NFLYLQVKGEVE 147 (232)
T ss_dssp CSEEEECCCCCH-------HHHHHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTTC--SSHHHHHHHHHH
T ss_pred cccccccccccc-------cccchhhhhhhcccccceeeecc----cccCccccccCCccccccCc--cchhHHHHHHhh
Confidence 899999998531 23445666788999999988877 55567789999997655432 457999998888
Q ss_pred HHHHHHHHHHccCCc-EEEEeeCCcccCCCc
Q 028868 159 QLTKNLACEWAKDNI-RTNTVAPWVIKTSMI 188 (202)
Q Consensus 159 ~~~~~la~e~~~~gi-~v~~v~pG~v~t~~~ 188 (202)
...+. .|. .+..+.||.+..+..
T Consensus 148 ~~l~~-------~~~~~~~IlRP~~i~G~~~ 171 (232)
T d2bkaa1 148 AKVEE-------LKFDRYSVFRPGVLLCDRQ 171 (232)
T ss_dssp HHHHT-------TCCSEEEEEECCEEECTTG
T ss_pred hcccc-------ccccceEEecCceeecCCC
Confidence 76542 243 577789999987643
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.56 E-value=4.7e-14 Score=105.33 Aligned_cols=167 Identities=13% Similarity=0.080 Sum_probs=112.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
++||||||+|+||++++++|+++|+ .|+...|++++... ...++.++.+|+++.+++.++++ .
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~--------~ 68 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-------IGGEADVFIGDITDADSINPAFQ--------G 68 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-------TTCCTTEEECCTTSHHHHHHHHT--------T
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-------ccCCcEEEEeeeccccccccccc--------c
Confidence 6899999999999999999999996 46667888765432 23467889999999888766654 5
Q ss_pred ccEEEEcCCCCCCCC---------CCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChh
Q 028868 79 LNILINNAAIAFVKP---------TVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSL 149 (202)
Q Consensus 79 id~vi~~ag~~~~~~---------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~ 149 (202)
+|.+||+++...... ........+.....+|+.++..++.... ....+...+.++.....+..+...
T Consensus 69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~~~~~~~~~~~ 144 (252)
T d2q46a1 69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK----VAGVKHIVVVGSMGGTNPDHPLNK 144 (252)
T ss_dssp CSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHH----HHTCSEEEEEEETTTTCTTCGGGG
T ss_pred ceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccc----cccccccccccccccCCCCccccc
Confidence 799999998642111 0111223345566788888888776653 334577888888766655444444
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
+..++........... ....|+++..+.||++..+..
T Consensus 145 ~~~~~~~~~~~~~~~~--~~~~~~~~~ilRp~~v~g~~~ 181 (252)
T d2q46a1 145 LGNGNILVWKRKAEQY--LADSGTPYTIIRAGGLLDKEG 181 (252)
T ss_dssp GGGCCHHHHHHHHHHH--HHHSSSCEEEEEECEEECSCT
T ss_pred ccccchhhhhhhhhhh--hhcccccceeecceEEECCCc
Confidence 4444333333322221 224689999999999977643
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.43 E-value=9.1e-13 Score=100.78 Aligned_cols=144 Identities=22% Similarity=0.142 Sum_probs=103.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||||.||.+++++|.++|++|+.++|.. +|++|.+++++++... ++|
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~------~~d 54 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK------KPN 54 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc------CCC
Confidence 5799999999999999999999999999999863 5999999988887752 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc-----------CCCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR-----------GIPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~-----------~~~~~~~ 149 (202)
+|||+++..... ......+...+.|......+...... . ...+++.||..... +..+...
T Consensus 55 ~vih~a~~~~~~----~~~~~~~~~~~~n~~~~~~~~~~~~~----~-~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~ 125 (281)
T d1vl0a_ 55 VVINCAAHTAVD----KCEEQYDLAYKINAIGPKNLAAAAYS----V-GAEIVQISTDYVFDGEAKEPITEFDEVNPQSA 125 (281)
T ss_dssp EEEECCCCCCHH----HHHHCHHHHHHHHTHHHHHHHHHHHH----H-TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred EEEeeccccccc----cccccchhhccccccccccccccccc----c-cccccccccceeeeccccccccccccccchhh
Confidence 999999864321 23334456677888777777665522 2 33555555543221 1235567
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
|+.+|...+.+.+. .+.....+.|+++..+-
T Consensus 126 ~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~ 156 (281)
T d1vl0a_ 126 YGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDG 156 (281)
T ss_dssp HHHHHHHHHHHHHH-------HCSSEEEEEECSEESSS
T ss_pred hhhhhhHHHHHHHH-------hCCCccccceeEEeCCC
Confidence 88888887766542 25677889999987654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.41 E-value=4.7e-13 Score=98.89 Aligned_cols=149 Identities=13% Similarity=0.161 Sum_probs=103.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
|++|||||||.||++++++|+++|+ +|+...|++.. ....+..+..|..++ .+.....
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------------~~~~~~~~~~d~~~~-------~~~~~~~ 62 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------EHPRLDNPVGPLAEL-------LPQLDGS 62 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------CCTTEECCBSCHHHH-------GGGCCSC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------------hcccccccccchhhh-------hhccccc
Confidence 7899999999999999999999998 67777775421 011123344554332 2222257
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMN 158 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~ 158 (202)
+|.+|+++|..... ...-+...+.|+.++..+++++ ++.+..+++++||..+... ....|..+|...+
T Consensus 63 ~d~vi~~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~a----~~~~v~~~i~~Ss~~~~~~--~~~~y~~~K~~~E 130 (212)
T d2a35a1 63 IDTAFCCLGTTIKE------AGSEEAFRAVDFDLPLAVGKRA----LEMGARHYLVVSALGADAK--SSIFYNRVKGELE 130 (212)
T ss_dssp CSEEEECCCCCHHH------HSSHHHHHHHHTHHHHHHHHHH----HHTTCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred hheeeeeeeeeccc------cccccccccchhhhhhhccccc----ccccccccccccccccccc--cccchhHHHHHHh
Confidence 89999999864211 1123567788999999988877 5566789999998765432 3467999998877
Q ss_pred HHHHHHHHHHccCCc-EEEEeeCCcccCCCc
Q 028868 159 QLTKNLACEWAKDNI-RTNTVAPWVIKTSMI 188 (202)
Q Consensus 159 ~~~~~la~e~~~~gi-~v~~v~pG~v~t~~~ 188 (202)
...+ ..+. +...+.|+.+..+..
T Consensus 131 ~~l~-------~~~~~~~~I~Rp~~v~G~~~ 154 (212)
T d2a35a1 131 QALQ-------EQGWPQLTIARPSLLFGPRE 154 (212)
T ss_dssp HHHT-------TSCCSEEEEEECCSEESTTS
T ss_pred hhcc-------ccccccceeeCCcceeCCcc
Confidence 6554 2343 577889999977654
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.40 E-value=6.9e-13 Score=102.07 Aligned_cols=130 Identities=20% Similarity=0.227 Sum_probs=93.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|||||+|.||.+++++|.++|+ ++.++++... +..|++|.+.++++++.. ++|
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~------~~D 56 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSKE-----------------FCGDFSNPKGVAETVRKL------RPD 56 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCSS-----------------SCCCTTCHHHHHHHHHHH------CCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCcc-----------------ccCcCCCHHHHHHHHHHc------CCC
Confidence 6899999999999999999999986 4444444321 236999999988888753 689
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 149 (202)
+|||+||...... ..+.....++.|+.++..+..++ ++. +.+++++||...... ..+...
T Consensus 57 ~Vih~Aa~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~----~~~-~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~ 127 (298)
T d1n2sa_ 57 VIVNAAAHTAVDK----AESEPELAQLLNATSVEAIAKAA----NET-GAWVVHYSTDYVFPGTGDIPWQETDATSPLNV 127 (298)
T ss_dssp EEEECCCCCCHHH----HTTCHHHHHHHHTHHHHHHHHHH----TTT-TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred EEEEecccccccc----cccCccccccccccccccchhhh----hcc-ccccccccccccccCCCCCCCccccccCCCch
Confidence 9999999764322 12334567789999999988876 333 457777777643321 124568
Q ss_pred hhhhHHHHHHHHHH
Q 028868 150 YGAYKGAMNQLTKN 163 (202)
Q Consensus 150 y~asK~a~~~~~~~ 163 (202)
|+.+|.+.+.+.+.
T Consensus 128 y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 128 YGKTKLAGEKALQD 141 (298)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HhhhhhhhhhhHHh
Confidence 99999888776653
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.31 E-value=1.4e-11 Score=95.10 Aligned_cols=149 Identities=17% Similarity=0.152 Sum_probs=93.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHH--H--HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL--D--ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~--~--~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
++||||||+|.||++++++|+++|++|+++.|+.... . .....+. ..++.++.+|+.|.+++.+.+.
T Consensus 4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~--~~~v~~v~~d~~d~~~~~~~~~------- 74 (312)
T d1qyda_ 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALK------- 74 (312)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHT-------
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhc--cCCcEEEEeecccchhhhhhcc-------
Confidence 4699999999999999999999999999999965321 1 1122222 3457888999999887666544
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----CCCChhhh
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----IPSVSLYG 151 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----~~~~~~y~ 151 (202)
..+.++++++..... .|..+...++.++ ++....++++.||...... ..+...|.
T Consensus 75 -~~~~~~~~~~~~~~~---------------~~~~~~~~~l~~a----~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~ 134 (312)
T d1qyda_ 75 -QVDVVISALAGGVLS---------------HHILEQLKLVEAI----KEAGNIKRFLPSEFGMDPDIMEHALQPGSITF 134 (312)
T ss_dssp -TCSEEEECCCCSSSS---------------TTTTTHHHHHHHH----HHSCCCSEEECSCCSSCTTSCCCCCSSTTHHH
T ss_pred -Ccchhhhhhhhcccc---------------cchhhhhHHHHHH----HHhcCCcEEEEeeccccCCCcccccchhhhhh
Confidence 467888887753221 2333344444443 4444567777777543322 12233444
Q ss_pred hhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccC
Q 028868 152 AYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKT 185 (202)
Q Consensus 152 asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t 185 (202)
.+|..++.+. ...++....+.||.+..
T Consensus 135 ~~~~~~~~~~-------~~~~~~~~i~r~~~~~g 161 (312)
T d1qyda_ 135 IDKRKVRRAI-------EAASIPYTYVSSNMFAG 161 (312)
T ss_dssp HHHHHHHHHH-------HHTTCCBCEEECCEEHH
T ss_pred HHHHHHHHhh-------cccccceEEeccceeec
Confidence 5544443322 23477888888888854
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.29 E-value=6e-17 Score=118.42 Aligned_cols=47 Identities=26% Similarity=0.402 Sum_probs=43.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK 47 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~ 47 (202)
|++.|+||+|+||+++|+.|++.|++|++.+|++++++.+.+++.+.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~ 47 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI 47 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 57889988899999999999999999999999999999998888754
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.26 E-value=1e-10 Score=92.31 Aligned_cols=150 Identities=17% Similarity=0.029 Sum_probs=95.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+|+||||||.||.+++++|+++|++|+++.|++++... ..+. ...++..+..|+.|..++.+ . .+ ...|
T Consensus 4 ktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~-~~~~v~~~~gD~~d~~~~~~---~---a~-~~~~ 73 (350)
T d1xgka_ 4 KTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQ-AIPNVTLFQGPLLNNVPLMD---T---LF-EGAH 73 (350)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHH-TSTTEEEEESCCTTCHHHHH---H---HH-TTCS
T ss_pred CEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhc-ccCCCEEEEeeCCCcHHHHH---H---Hh-cCCc
Confidence 789999999999999999999999999999998766432 2222 23358889999998654322 1 12 3467
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC--CCCChhhhhhHHHHH
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG--IPSVSLYGAYKGAMN 158 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~--~~~~~~y~asK~a~~ 158 (202)
.++.+...... .++....+++.++ .+.+..++++.||...... ......|..+|...+
T Consensus 74 ~~~~~~~~~~~----------------~~~~~~~~~~~aa----~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~ 133 (350)
T d1xgka_ 74 LAFINTTSQAG----------------DEIAIGKDLADAA----KRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVE 133 (350)
T ss_dssp EEEECCCSTTS----------------CHHHHHHHHHHHH----HHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHH
T ss_pred eEEeecccccc----------------hhhhhhhHHHHHH----HHhCCCceEEEeeccccccCCcccchhhhhhHHHHH
Confidence 77665442111 1222233344443 3344567788888665433 223456777787666
Q ss_pred HHHHHHHHHHccCCcEEEEeeCCcccCCC
Q 028868 159 QLTKNLACEWAKDNIRTNTVAPWVIKTSM 187 (202)
Q Consensus 159 ~~~~~la~e~~~~gi~v~~v~pG~v~t~~ 187 (202)
.+.+ ..++....+.||++..+.
T Consensus 134 ~~~~-------~~~~~~~~vr~~~~~~~~ 155 (350)
T d1xgka_ 134 NYVR-------QLGLPSTFVYAGIYNNNF 155 (350)
T ss_dssp HHHH-------TSSSCEEEEEECEEGGGC
T ss_pred HHHH-------hhccCceeeeeceeeccc
Confidence 5544 345777888888775543
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.24 E-value=1.5e-10 Score=88.57 Aligned_cols=150 Identities=13% Similarity=0.073 Sum_probs=92.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHH-----HHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELD-----ARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~-----~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|+||||||+|.||++++++|+++|++|++++|+..... .....+. ...+.++..|+.+.....+.++
T Consensus 4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~------ 75 (307)
T d1qyca_ 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVK------ 75 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHH------
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc--cCCcEEEEeecccchhhhhhhh------
Confidence 67999999999999999999999999999999654321 1122222 3357788899999887666554
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHH
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKG 155 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~ 155 (202)
..+.+++.++... ..+...+.+++ .......+++.||............+...+.
T Consensus 76 --~~~~vi~~~~~~~-------------------~~~~~~~~~a~----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 130 (307)
T d1qyca_ 76 --NVDVVISTVGSLQ-------------------IESQVNIIKAI----KEVGTVKRFFPSEFGNDVDNVHAVEPAKSVF 130 (307)
T ss_dssp --TCSEEEECCCGGG-------------------SGGGHHHHHHH----HHHCCCSEEECSCCSSCTTSCCCCTTHHHHH
T ss_pred --hceeeeecccccc-------------------cchhhHHHHHH----HHhccccceeeeccccccccccccccccccc
Confidence 3688888887532 12222333333 2334556777777544433333333333333
Q ss_pred HHHHHHHHHHHHHccCCcEEEEeeCCcccCC
Q 028868 156 AMNQLTKNLACEWAKDNIRTNTVAPWVIKTS 186 (202)
Q Consensus 156 a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~ 186 (202)
........... ..|+....+.|+++..+
T Consensus 131 ~~~~~~~~~~~---~~~~~~~i~r~~~v~g~ 158 (307)
T d1qyca_ 131 EVKAKVRRAIE---AEGIPYTYVSSNCFAGY 158 (307)
T ss_dssp HHHHHHHHHHH---HHTCCBEEEECCEEHHH
T ss_pred cccccccchhh---ccCCCceecccceecCC
Confidence 32222222222 24688888999888644
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.21 E-value=6.5e-11 Score=91.01 Aligned_cols=161 Identities=15% Similarity=0.166 Sum_probs=98.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCcc
Q 028868 3 ALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF-QGKLN 80 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~-~~~id 80 (202)
||||||+|.||++++++|+++|+ .|+++++-.... +... +.+. ..+|..+.+. ..+...... -..++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~-~~~~-~~~~------~~~~~~~~~~---~~~~~~~~~~~~~~~ 70 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGT-KFVN-LVDL------NIADYMDKED---FLIQIMAGEEFGDVE 70 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGG-GGHH-HHTS------CCSEEEEHHH---HHHHHHTTCCCSSCC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcc-hhhc-cccc------chhhhccchH---HHHHHhhhhcccchh
Confidence 79999999999999999999997 577776322111 1111 1110 0122233222 333333211 14688
Q ss_pred EEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccC-----------CCCChh
Q 028868 81 ILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRG-----------IPSVSL 149 (202)
Q Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~-----------~~~~~~ 149 (202)
+++|.|+..... .. ..+...+.|+.+...+++++ ...+.. +++.||...... .++...
T Consensus 71 ~i~~~aa~~~~~---~~---~~~~~~~~~~~~~~~~l~~~----~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~ 139 (307)
T d1eq2a_ 71 AIFHEGACSSTT---EW---DGKYMMDNNYQYSKELLHYC----LEREIP-FLYASSAATYGGRTSDFIESREYEKPLNV 139 (307)
T ss_dssp EEEECCSCCCTT---CC---CHHHHHHHTHHHHHHHHHHH----HHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred hhhhhccccccc---cc---cccccccccccccccccccc----cccccc-ccccccccccccccccccccccccccccc
Confidence 999988854322 11 23455677788888877765 333333 445455443322 235678
Q ss_pred hhhhHHHHHHHHHHHHHHHccCCcEEEEeeCCcccCCCc
Q 028868 150 YGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMI 188 (202)
Q Consensus 150 y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG~v~t~~~ 188 (202)
|+.+|.+.+.+++.+..+ .++.+..+.|..+..|..
T Consensus 140 Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~ 175 (307)
T d1eq2a_ 140 YGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPRE 175 (307)
T ss_dssp HHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSC
T ss_pred cccccchhhhhccccccc---cccccccccceeEeeccc
Confidence 999999999999888665 468888888888876644
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.28 E-value=1.5e-06 Score=58.51 Aligned_cols=72 Identities=13% Similarity=0.018 Sum_probs=57.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|.|+ |.+|+.+++.|.++|+.|++++++++..+.+.+++ +..++..|.++.+.++++-- ...|
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~-----~~~vi~Gd~~~~~~l~~~~i-------~~a~ 67 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGI-------EDAD 67 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTT-------TTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh-----hhhhccCcccchhhhhhcCh-------hhhh
Confidence 68999998 89999999999999999999999998887765432 35678899999876554411 3567
Q ss_pred EEEEc
Q 028868 81 ILINN 85 (202)
Q Consensus 81 ~vi~~ 85 (202)
.++..
T Consensus 68 ~vv~~ 72 (132)
T d1lssa_ 68 MYIAV 72 (132)
T ss_dssp EEEEC
T ss_pred hhccc
Confidence 77764
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=98.20 E-value=5e-06 Score=58.94 Aligned_cols=77 Identities=13% Similarity=0.132 Sum_probs=53.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.++||+||+|++|.+.++.....|++|+.+++++++.+.+. +.+.+..+.. .+++..+...+.. .+..+|
T Consensus 31 ~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~----~~Ga~~vi~~---~~~~~~~~~~~~~---~~~Gvd 100 (182)
T d1v3va2 31 ETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK----QIGFDAAFNY---KTVNSLEEALKKA---SPDGYD 100 (182)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEEEET---TSCSCHHHHHHHH---CTTCEE
T ss_pred CEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH----hhhhhhhccc---ccccHHHHHHHHh---hcCCCc
Confidence 47999999999999999999999999999999987654433 3344444332 3332323222221 124699
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++.+.|
T Consensus 101 ~v~D~vG 107 (182)
T d1v3va2 101 CYFDNVG 107 (182)
T ss_dssp EEEESSC
T ss_pred eeEEecC
Confidence 9999998
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.19 E-value=2.6e-06 Score=59.79 Aligned_cols=63 Identities=14% Similarity=0.082 Sum_probs=48.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|+++|.|| |.+|+.+|++|.++|++|++.+|+.++.+.+.+.+ ........+..+.......+
T Consensus 3 K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~----~~~~~~~~~~~~~~~~~~~i 65 (182)
T d1e5qa1 3 KSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEV 65 (182)
T ss_dssp CEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC----TTEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc----cccccccccccchhhhHhhh
Confidence 78999988 89999999999999999999999998887766543 23455556666655544443
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=98.15 E-value=6.8e-06 Score=57.44 Aligned_cols=80 Identities=28% Similarity=0.342 Sum_probs=56.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++|+| +|++|...++.+...|++|+++++++++++.+.+ .+.+..+. .|- ..++..+..+.+.+..+..+|+
T Consensus 29 ~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~----~ga~~~~~-~~~-~~~~~~~~~~~~~~~~g~g~D~ 101 (170)
T d1e3ja2 29 TVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----CGADVTLV-VDP-AKEEESSIIERIRSAIGDLPNV 101 (170)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----TTCSEEEE-CCT-TTSCHHHHHHHHHHHSSSCCSE
T ss_pred EEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH----cCCcEEEe-ccc-cccccchhhhhhhcccccCCce
Confidence 689997 5899999999888899999999999988765543 23333322 221 2233445566666666567999
Q ss_pred EEEcCCC
Q 028868 82 LINNAAI 88 (202)
Q Consensus 82 vi~~ag~ 88 (202)
+|.++|.
T Consensus 102 vid~~g~ 108 (170)
T d1e3ja2 102 TIDCSGN 108 (170)
T ss_dssp EEECSCC
T ss_pred eeecCCC
Confidence 9999984
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.12 E-value=9.2e-06 Score=57.05 Aligned_cols=76 Identities=17% Similarity=0.258 Sum_probs=53.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
.++||+||+|++|...++.....|++|+.+++++++.+.+. +.+.+-. .|-++.+- .+++++..+ ..+
T Consensus 30 ~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~----~~Ga~~v---i~~~~~~~----~~~i~~~t~~~g~ 98 (174)
T d1yb5a2 30 ESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----QNGAHEV---FNHREVNY----IDKIKKYVGEKGI 98 (174)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEE---EETTSTTH----HHHHHHHHCTTCE
T ss_pred CEEEEEeccccccccccccccccCccccccccccccccccc----ccCcccc---cccccccH----HHHhhhhhccCCc
Confidence 47999999999999999988889999999999877654443 2344322 25555443 333433333 359
Q ss_pred cEEEEcCC
Q 028868 80 NILINNAA 87 (202)
Q Consensus 80 d~vi~~ag 87 (202)
|+++.+.|
T Consensus 99 d~v~d~~g 106 (174)
T d1yb5a2 99 DIIIEMLA 106 (174)
T ss_dssp EEEEESCH
T ss_pred eEEeeccc
Confidence 99999876
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.07 E-value=8e-06 Score=57.66 Aligned_cols=104 Identities=20% Similarity=0.210 Sum_probs=66.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
++||+||+||+|....+..-..|++|+.+++++++.+.+. +.+.+..+ |=.+ . .. +..+...++.+|+
T Consensus 34 ~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~----~lGa~~vi---~~~~-~-~~---~~~~~~~~~gvD~ 101 (176)
T d1xa0a2 34 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR----VLGAKEVL---ARED-V-MA---ERIRPLDKQRWAA 101 (176)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH----HTTCSEEE---ECC--------------CCSCCEEE
T ss_pred EEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH----hcccceee---ecch-h-HH---HHHHHhhccCcCE
Confidence 6999999999999988888889999999999988875554 23444332 2111 1 11 1122222357999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCC
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIP 145 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~ 145 (202)
++.+.|.. + + ...++.++. +|+++.++...+..+..
T Consensus 102 vid~vgg~--------~---~---------------~~~l~~l~~--~Griv~~G~~~g~~~~~ 137 (176)
T d1xa0a2 102 AVDPVGGR--------T---L---------------ATVLSRMRY--GGAVAVSGLTGGAEVPT 137 (176)
T ss_dssp EEECSTTT--------T---H---------------HHHHHTEEE--EEEEEECSCCSSSCCCC
T ss_pred EEEcCCch--------h---H---------------HHHHHHhCC--CceEEEeecccCcccCC
Confidence 99999852 1 1 122334444 68999999887665533
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.04 E-value=7.7e-05 Score=51.96 Aligned_cols=78 Identities=21% Similarity=0.183 Sum_probs=55.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|.|+ |++|...++.+...|+ +|+++++++++++.+. + .|.+... ..+-.+ .....+.+...++..+|
T Consensus 29 ~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~---~Ga~~~~-~~~~~~---~~~~~~~~~~~~g~g~D 99 (171)
T d1pl8a2 29 KVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-E---IGADLVL-QISKES---PQEIARKVEGQLGCKPE 99 (171)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-H---TTCSEEE-ECSSCC---HHHHHHHHHHHHTSCCS
T ss_pred EEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-H---hCCcccc-cccccc---cccccccccccCCCCce
Confidence 6889987 9999999999999999 7999999988887553 2 2433322 233333 33344444445556799
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|.++|.
T Consensus 100 vvid~~G~ 107 (171)
T d1pl8a2 100 VTIECTGA 107 (171)
T ss_dssp EEEECSCC
T ss_pred EEEeccCC
Confidence 99999994
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=98.03 E-value=4e-05 Score=54.18 Aligned_cols=80 Identities=19% Similarity=0.176 Sum_probs=58.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+++|.|+ ||.|++++..|.++|. ++.+..|+.++.+++....+.. .........|+.+.+.+.....
T Consensus 19 k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 89 (182)
T d1vi2a1 19 KTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-------- 89 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--------
T ss_pred CEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--------
Confidence 68999999 7999999999999998 7889999887766654433221 1224455688888776554433
Q ss_pred CccEEEEcCCCC
Q 028868 78 KLNILINNAAIA 89 (202)
Q Consensus 78 ~id~vi~~ag~~ 89 (202)
..|++||+....
T Consensus 90 ~~diiIN~Tp~G 101 (182)
T d1vi2a1 90 SADILTNGTKVG 101 (182)
T ss_dssp TCSEEEECSSTT
T ss_pred ccceeccccCCc
Confidence 579999998654
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=98.02 E-value=1e-05 Score=57.63 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=57.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
++++||+|++|.+..+..-..|++|+.+.|+.++.++..+.+++.+.+..+.. |-.+.....+...++....++.+|++
T Consensus 33 li~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~-~~~~~~~~~~~v~~~~~~~g~~vdvv 111 (189)
T d1gu7a2 33 FIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITE-DQNNSREFGPTIKEWIKQSGGEAKLA 111 (189)
T ss_dssp EEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEH-HHHHCGGGHHHHHHHHHHHTCCEEEE
T ss_pred EEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEec-cccchhHHHHHHHHHHhhccCCceEE
Confidence 44479999999999888888899999999888777777776666665544322 21111223333444444445679999
Q ss_pred EEcCC
Q 028868 83 INNAA 87 (202)
Q Consensus 83 i~~ag 87 (202)
+.+.|
T Consensus 112 ~D~vg 116 (189)
T d1gu7a2 112 LNCVG 116 (189)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99887
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.99 E-value=3.7e-05 Score=53.18 Aligned_cols=70 Identities=14% Similarity=0.185 Sum_probs=52.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+++|.|+ |++|..+++.|..+|+ ++.++.|+.++.+.+..++. .. .. ..+++.+.+ ...
T Consensus 25 ~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~---~~--~~-----~~~~~~~~l--------~~~ 85 (159)
T d1gpja2 25 KTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG---GE--AV-----RFDELVDHL--------ARS 85 (159)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT---CE--EC-----CGGGHHHHH--------HTC
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh---cc--cc-----cchhHHHHh--------ccC
Confidence 57999998 9999999999999998 79999999988888877653 22 11 122322222 357
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+||++.+..
T Consensus 86 Divi~atss~ 95 (159)
T d1gpja2 86 DVVVSATAAP 95 (159)
T ss_dssp SEEEECCSSS
T ss_pred CEEEEecCCC
Confidence 9999998853
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=3.5e-05 Score=54.09 Aligned_cols=77 Identities=13% Similarity=0.123 Sum_probs=55.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHh-CCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIF-QGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~-~~~i 79 (202)
++++|+||+|++|...++.....|++|+++++++++.+.+.+ + |.+. + .|-++++-.+ ++++.. +..+
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-l---Ga~~-v--i~~~~~d~~~----~v~~~t~g~g~ 98 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-A---GAWQ-V--INYREEDLVE----RLKEITGGKKV 98 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-H---TCSE-E--EETTTSCHHH----HHHHHTTTCCE
T ss_pred CEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-c---CCeE-E--EECCCCCHHH----HHHHHhCCCCe
Confidence 479999999999999999988899999999999988766542 2 4332 2 3555543333 333333 3469
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+++.+.|.
T Consensus 99 d~v~d~~g~ 107 (179)
T d1qora2 99 RVVYDSVGR 107 (179)
T ss_dssp EEEEECSCG
T ss_pred EEEEeCccH
Confidence 999998884
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.93 E-value=2e-05 Score=55.52 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=53.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~i 79 (202)
+++||+||+|++|...++.+...|++|+++++++++.+.+ ++.+.+.. .|-.+++ +.+++++..+ ..+
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l----~~~Ga~~v---i~~~~~~----~~~~v~~~t~~~g~ 95 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEYV---GDSRSVD----FADEILELTDGYGV 95 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSEE---EETTCST----HHHHHHHHTTTCCE
T ss_pred CEEEEECCCCCcccccchhhccccccceeeeccccccccc----cccccccc---ccCCccC----HHHHHHHHhCCCCE
Confidence 4799999999999999998888999999999987765433 23444422 2444433 2334444332 369
Q ss_pred cEEEEcCC
Q 028868 80 NILINNAA 87 (202)
Q Consensus 80 d~vi~~ag 87 (202)
|+++.+.|
T Consensus 96 d~v~d~~g 103 (183)
T d1pqwa_ 96 DVVLNSLA 103 (183)
T ss_dssp EEEEECCC
T ss_pred EEEEeccc
Confidence 99999988
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.90 E-value=7.8e-05 Score=52.10 Aligned_cols=73 Identities=12% Similarity=0.198 Sum_probs=56.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|.|+ ||.+++++..|.+.+.+|.++.|+.++.+...+.+.... ++..+..|..+ . ...|
T Consensus 19 k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~~--------------~-~~~d 81 (171)
T d1p77a1 19 QHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSIP--------------L-QTYD 81 (171)
T ss_dssp CEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGCC--------------C-SCCS
T ss_pred CEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhcccc--------------c-cccc
Confidence 57889888 799999999999888899999999999999888876433 45555544221 1 4689
Q ss_pred EEEEcCCCCC
Q 028868 81 ILINNAAIAF 90 (202)
Q Consensus 81 ~vi~~ag~~~ 90 (202)
++||+.....
T Consensus 82 iiIN~tp~g~ 91 (171)
T d1p77a1 82 LVINATSAGL 91 (171)
T ss_dssp EEEECCCC--
T ss_pred eeeecccccc
Confidence 9999987653
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.89 E-value=1.8e-05 Score=47.81 Aligned_cols=41 Identities=24% Similarity=0.301 Sum_probs=35.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
++++|+||+||+|....+.+...|++|+.+.+++++.+.+.
T Consensus 33 ~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~ 73 (77)
T d1o8ca2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK 73 (77)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 46999999999999999988889999999999988876553
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.87 E-value=4e-05 Score=53.57 Aligned_cols=72 Identities=14% Similarity=0.241 Sum_probs=54.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|+++|.|+ ||.+++++..|.+.|.+|.++.|+.++.+.+.+.+...+ .+..+..| +. . ....|
T Consensus 19 k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~~~--~~------------~-~~~~d 81 (170)
T d1nyta1 19 LRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALSMD--EL------------E-GHEFD 81 (170)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECCSG--GG------------T-TCCCS
T ss_pred CEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccccc--cc------------c-ccccc
Confidence 67999998 799999999999999999999999999988887765543 23332222 10 0 14689
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
++||+....
T Consensus 82 liIN~Tp~G 90 (170)
T d1nyta1 82 LIINATSSG 90 (170)
T ss_dssp EEEECCSCG
T ss_pred eeecccccC
Confidence 999998654
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=97.85 E-value=0.00023 Score=48.31 Aligned_cols=111 Identities=10% Similarity=0.075 Sum_probs=67.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
|++.|+|+ |.+|.++|..|+.+| .+|++.++++++.+....++.+. .........|.. ..
T Consensus 6 ~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--------------~~ 70 (146)
T d1ez4a1 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--------------DC 70 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--------------GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--------------Hh
Confidence 57889996 999999999999988 48999999998887776666542 222333333421 12
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISS 137 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS 137 (202)
..-|++|.++|..... ...-.+.+..|.. +++...+.+.+.. .+.++++|.
T Consensus 71 -~~adivvitag~~~~~------g~~r~~l~~~N~~----i~~~~~~~i~~~~p~aivivvtN 122 (146)
T d1ez4a1 71 -KDADLVVITAGAPQKP------GESRLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAAN 122 (146)
T ss_dssp -TTCSEEEECCCC----------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSS
T ss_pred -ccccEEEEecccccCC------CCCHHHHHHHHHH----HHHHHHHHHhhcCCCcEEEEeCC
Confidence 3579999999964321 1122344455654 3444444445443 455555554
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.81 E-value=5.1e-05 Score=53.03 Aligned_cols=72 Identities=18% Similarity=0.238 Sum_probs=50.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++++|+||+|++|...++.+-..|++|+.+++++++.+.+. +.+.+..+ |..+ . ..++.+ +..+|
T Consensus 29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~----~lGa~~~i---~~~~--~----~~~~~~--~~g~D 93 (171)
T d1iz0a2 29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL----ALGAEEAA---TYAE--V----PERAKA--WGGLD 93 (171)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH----HTTCSEEE---EGGG--H----HHHHHH--TTSEE
T ss_pred CEEEEEeccccchhhhhhhhccccccccccccccccccccc----ccccceee---ehhh--h----hhhhhc--ccccc
Confidence 47999999999999999888889999999999887775543 23443322 3222 1 122222 25699
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++.+.|
T Consensus 94 ~v~d~~G 100 (171)
T d1iz0a2 94 LVLEVRG 100 (171)
T ss_dssp EEEECSC
T ss_pred ccccccc
Confidence 9999776
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.79 E-value=1.1e-05 Score=53.97 Aligned_cols=73 Identities=18% Similarity=0.192 Sum_probs=54.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|.++|.|+ |.+|+++|+.|.++|+.|++++.+++..+.+. +.+ ...+..|.++++.+.++- . ...|
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~--~~~~~gd~~~~~~l~~a~------i-~~a~ 66 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYA--THAVIANATEENELLSLG------I-RNFE 66 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTC--SEEEECCTTCTTHHHHHT------G-GGCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhC--CcceeeecccchhhhccC------C-cccc
Confidence 67888887 79999999999999999999999987776653 333 345568999977655431 1 2467
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.+|...+
T Consensus 67 ~vi~~~~ 73 (134)
T d2hmva1 67 YVIVAIG 73 (134)
T ss_dssp EEEECCC
T ss_pred EEEEEcC
Confidence 7777655
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.72 E-value=0.00072 Score=45.71 Aligned_cols=113 Identities=13% Similarity=0.110 Sum_probs=67.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChh--HHHHHHHHHHhc----CC--eEEEEEecCCCHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQI--ELDARLHEWKNK----GF--KVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~--~~~~~~~~~~~~----~~--~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
+++.|+||+|.+|.++|..++.+|. ++++.+++++ +++....++.+. .. ++.....+..
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~----------- 69 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENL----------- 69 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCG-----------
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchH-----------
Confidence 5789999999999999999999984 8999998763 344444455431 22 2222222211
Q ss_pred HHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecC
Q 028868 71 VTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISS 137 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS 137 (202)
+.+ ..-|++|.+||..... ..+. .+.++.|..= ++...+.+.+..+..|+.+|.
T Consensus 70 --~~l-~~aDvVVitAG~~~~~---g~sR---~dl~~~Na~i----v~~i~~~i~~~~~~~iivVtN 123 (145)
T d1hyea1 70 --RII-DESDVVIITSGVPRKE---GMSR---MDLAKTNAKI----VGKYAKKIAEICDTKIFVITN 123 (145)
T ss_dssp --GGG-TTCSEEEECCSCCCCT---TCCH---HHHHHHHHHH----HHHHHHHHHHHCCCEEEECSS
T ss_pred --HHh-ccceEEEEecccccCC---CCCh---hhhhhhhHHH----HHHHHHHHhccCCCeEEEEcC
Confidence 112 3579999999974322 1232 2455566653 444444444443445555544
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.70 E-value=0.00017 Score=50.64 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=52.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhC-CC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQ-GK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~-~~ 78 (202)
.+++|+|| |++|...++.+-..|+ +|+++++++++++.+. + .|.+.. + |..+. +..+..+++.+..+ ..
T Consensus 30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~---lGa~~v-i--~~~~~-~~~~~~~~i~~~~~~~g 100 (182)
T d1vj0a2 30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-E---IGADLT-L--NRRET-SVEERRKAIMDITHGRG 100 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-H---TTCSEE-E--ETTTS-CHHHHHHHHHHHTTTSC
T ss_pred CEEEEECC-Cccchhheecccccccccccccccccccccccc-c---ccceEE-E--ecccc-chHHHHHHHHHhhCCCC
Confidence 36899997 8999999998888998 8999999998876543 2 343332 2 33221 22223344444332 35
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
+|++|.++|.
T Consensus 101 ~Dvvid~vG~ 110 (182)
T d1vj0a2 101 ADFILEATGD 110 (182)
T ss_dssp EEEEEECSSC
T ss_pred ceEEeecCCc
Confidence 9999999985
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=97.68 E-value=0.00024 Score=49.49 Aligned_cols=75 Identities=12% Similarity=0.198 Sum_probs=50.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|.|+ |++|...++.+...|++ |+++++++++++.+. ++ +.+ .++ |-.+++ ..+++++..++.+|
T Consensus 31 ~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~---Ga~-~~i--~~~~~~----~~~~i~~~t~gg~D 98 (174)
T d1f8fa2 31 SFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QL---GAT-HVI--NSKTQD----PVAAIKEITDGGVN 98 (174)
T ss_dssp EEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HH---TCS-EEE--ETTTSC----HHHHHHHHTTSCEE
T ss_pred EEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-Hc---CCe-EEE--eCCCcC----HHHHHHHHcCCCCc
Confidence 6899998 89999999888888985 556778877766554 33 322 232 333322 33444444446799
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|.++|.
T Consensus 99 ~vid~~G~ 106 (174)
T d1f8fa2 99 FALESTGS 106 (174)
T ss_dssp EEEECSCC
T ss_pred EEEEcCCc
Confidence 99999994
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.67 E-value=0.00073 Score=45.83 Aligned_cols=113 Identities=12% Similarity=0.033 Sum_probs=70.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+|| |.+|.++|..|+..|. ++++.++++++++....++.+. ...+.+...|..+
T Consensus 7 ~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~~-------------- 71 (148)
T d1ldna1 7 ARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYDD-------------- 71 (148)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGGG--------------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHHH--------------
Confidence 46888897 9999999999999885 8999999998887777777643 2233333333211
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhc-CCCCeEEEecCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKA-SGNGSIVFISSVG 139 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~iv~vsS~~ 139 (202)
+ ..-|++|.++|....... +. .+.+..|.. +.+.+.+.+.+ ...+.++++|...
T Consensus 72 l-~daDvvvitag~~~~~~~---~R---~dl~~~N~~----i~~~i~~~i~~~~p~a~~ivvtNPv 126 (148)
T d1ldna1 72 C-RDADLVVICAGANQKPGE---TR---LDLVDKNIA----IFRSIVESVMASGFQGLFLVATNPV 126 (148)
T ss_dssp T-TTCSEEEECCSCCCCTTT---CS---GGGHHHHHH----HHHHHHHHHHHHTCCSEEEECSSSH
T ss_pred h-ccceeEEEecccccccCc---ch---hHHHHHHHH----HHHHHHHHHHhhCCCceEEEecCcc
Confidence 2 357999999997533221 11 123334543 33444444443 3456777766643
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.67 E-value=0.00045 Score=46.79 Aligned_cols=117 Identities=15% Similarity=0.103 Sum_probs=70.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
|++.|+|+ |.+|.++|-.|+.+|. ++++.+.++++++....++.+. ..+......|..+
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~~-------------- 66 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAA-------------- 66 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGGG--------------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHHH--------------
Confidence 68889996 8999999999999884 8999999998877766666533 2223333333211
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
. ..-|++|.+||..... .+-+..+=.+.++.|. .+++.+.+.+++. ..+.++++|...
T Consensus 67 l-~~adiVVitaG~~~~~--~~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtNPv 125 (146)
T d1hyha1 67 L-ADADVVISTLGNIKLQ--QDNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISNPV 125 (146)
T ss_dssp G-TTCSEEEECCSCGGGT--C-------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred h-ccccEEEEeccccccc--cccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecCcH
Confidence 1 3579999999965311 1001111122344554 3455555555554 356666666543
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.66 E-value=0.00011 Score=52.05 Aligned_cols=77 Identities=17% Similarity=0.186 Sum_probs=49.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAI-VHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~-Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++|||+||+||+|...++..-..|++ |+.+++++++......++ +.+..+ |..+++ . .+.+++..+..+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~---gad~vi---~~~~~~-~---~~~~~~~~~~Gv 101 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL---GFDAAV---NYKTGN-V---AEQLREACPGGV 101 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS---CCSEEE---ETTSSC-H---HHHHHHHCTTCE
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc---cceEEe---eccchh-H---HHHHHHHhccCc
Confidence 47999999999999988887779985 555677766665555443 333222 333322 2 223333233469
Q ss_pred cEEEEcCC
Q 028868 80 NILINNAA 87 (202)
Q Consensus 80 d~vi~~ag 87 (202)
|+++.+.|
T Consensus 102 Dvv~D~vG 109 (187)
T d1vj1a2 102 DVYFDNVG 109 (187)
T ss_dssp EEEEESSC
T ss_pred eEEEecCC
Confidence 99999988
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.56 E-value=0.00025 Score=49.12 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=53.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
.+++|+|++|++|...++.+...|. +|+++++++++++.+.+ .+.+. ++ |-++++..++..+. ..++.+
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~----~Ga~~-~i--~~~~~~~~~~~~~~---~~~~~~ 98 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----AGADY-VI--NASMQDPLAEIRRI---TESKGV 98 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----HTCSE-EE--ETTTSCHHHHHHHH---TTTSCE
T ss_pred CEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH----cCCce-ee--ccCCcCHHHHHHHH---hhcccc
Confidence 3689999999999999999998996 89999999877655543 24332 22 33333333333322 123469
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|+++.++|.
T Consensus 99 d~vid~~g~ 107 (170)
T d1jvba2 99 DAVIDLNNS 107 (170)
T ss_dssp EEEEESCCC
T ss_pred hhhhccccc
Confidence 999999984
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.54 E-value=0.0016 Score=44.55 Aligned_cols=112 Identities=12% Similarity=0.074 Sum_probs=71.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
++.|+|+ |.+|.++|..|+.+|. ++++.++++++++....++.+. +........|..+ .
T Consensus 21 KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~~--------------~ 85 (159)
T d2ldxa1 21 KITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYNV--------------S 85 (159)
T ss_dssp EEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGGG--------------G
T ss_pred eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchhh--------------h
Confidence 4778896 9999999999999885 8999999998888777777643 2222222233221 2
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
..-|++|..+|.......... +.++.|.. +.+...+.+.+. ..+.++++|...
T Consensus 86 -~~adivvitag~~~~~~~~R~------dll~~N~~----i~~~i~~~i~~~~p~~ivivvtNPv 139 (159)
T d2ldxa1 86 -ANSKLVIITAGARMVSGQTRL------DLLQRNVA----IMKAIVPGVIQNSPDCKIIVVTNPV 139 (159)
T ss_dssp -TTEEEEEECCSCCCCTTTCSS------CTTHHHHH----HHHHHTTTHHHHSTTCEEEECSSSH
T ss_pred -ccccEEEEecccccCCCCCHH------HHHHHHHH----HHHHHHHHHhccCCCeEEEEeCCcH
Confidence 467999999997543222211 11233333 455555555543 456777776643
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.53 E-value=0.00044 Score=47.57 Aligned_cols=82 Identities=18% Similarity=0.114 Sum_probs=57.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH--------h--cCCeEEEEEecCCCHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK--------N--KGFKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~--------~--~~~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
|++.|.|+ |-+|.++|+.|.+.|++|++.+|+++..+.+.+.-. + ...++.++.+. ...+++++++
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilavp---~~~~~~vl~~ 76 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTP---IQLILPTLEK 76 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECSC---HHHHHHHHHH
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccCc---Hhhhhhhhhh
Confidence 56788877 899999999999999999999999887776554210 0 02344444332 5678888888
Q ss_pred HHHHhCCCccEEEEcCC
Q 028868 71 VTSIFQGKLNILINNAA 87 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag 87 (202)
+.+.. .+=.+++..++
T Consensus 77 l~~~l-~~~~iv~~~~s 92 (165)
T d2f1ka2 77 LIPHL-SPTAIVTDVAS 92 (165)
T ss_dssp HGGGS-CTTCEEEECCS
T ss_pred hhhhc-ccccceeeccc
Confidence 87765 33445555544
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.49 E-value=0.0024 Score=43.76 Aligned_cols=113 Identities=12% Similarity=0.045 Sum_probs=72.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++-|+|+ |.+|.++|..|+.+|. ++++.+.+++..+....++.+. +........|..+
T Consensus 21 ~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~-------------- 85 (160)
T d1i0za1 21 NKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV-------------- 85 (160)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG--------------
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh--------------
Confidence 36788897 9999999999999986 8999999998887777777643 2222222233222
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
. ..-|++|..||...... .+. .+.++.|.. +++...+.+.+. ..+.++++|...
T Consensus 86 ~-~~adiVVitAg~~~~~g---~tR---~~l~~~N~~----i~~~i~~~i~~~~p~aiiivvtNPv 140 (160)
T d1i0za1 86 T-ANSKIVVVTAGVRQQEG---ESR---LNLVQRNVN----VFKFIIPQIVKYSPDCIIIVVSNPV 140 (160)
T ss_dssp G-TTCSEEEECCSCCCCTT---CCG---GGGHHHHHH----HHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred c-ccccEEEEecCCccccC---cch---HHHHHHHHH----HHHHHHHHHHhcCCCcEEEEeCCch
Confidence 1 35799999999753221 221 133334444 555556655554 356777777654
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.46 E-value=0.0006 Score=47.57 Aligned_cols=78 Identities=14% Similarity=0.122 Sum_probs=52.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
.+++|+|+ ||+|...++.+...|+ +|+.+++++++++.+.+. +.+..+-.-|-.+ ..+...+. ..+..+
T Consensus 31 ~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~----GA~~~in~~~~~~--~~~~~~~~---~~g~G~ 100 (176)
T d1d1ta2 31 STCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV----GATECISPKDSTK--PISEVLSE---MTGNNV 100 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHH----TCSEEECGGGCSS--CHHHHHHH---HHTSCC
T ss_pred CEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhc----CCcEEECccccch--HHHHHHHH---hccccc
Confidence 36899987 8999999999999996 899999999998765432 4333332222221 12222221 223579
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.+.|.
T Consensus 101 d~vi~~~g~ 109 (176)
T d1d1ta2 101 GYTFEVIGH 109 (176)
T ss_dssp CEEEECSCC
T ss_pred eEEEEeCCc
Confidence 999999984
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=97.46 E-value=0.00071 Score=48.03 Aligned_cols=115 Identities=14% Similarity=0.140 Sum_probs=65.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
.+++|.|+ |++|...+......|+ +|+++++++++++.+. +.+.+... |-.+ +++.+...++.+ +...
T Consensus 27 ~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~----~~Ga~~~~---~~~~-~~~~~~i~~~t~--g~g~ 95 (195)
T d1kola2 27 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK----AQGFEIAD---LSLD-TPLHEQIAALLG--EPEV 95 (195)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH----HTTCEEEE---TTSS-SCHHHHHHHHHS--SSCE
T ss_pred CEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh----hccccEEE---eCCC-cCHHHHHHHHhC--CCCc
Confidence 37899987 8999888888777887 8889999988776554 23443322 2222 232222222221 2369
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSV 138 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~ 138 (202)
|++|.+.|.......... .+..+.-..++.+...++. .|+|+.++-.
T Consensus 96 D~vid~vG~~~~~~~~~~----------~~~~~~~~~l~~~~~~~r~--gG~v~~~G~~ 142 (195)
T d1kola2 96 DCAVDAVGFEARGHGHEG----------AKHEAPATVLNSLMQVTRV--AGKIGIPGLY 142 (195)
T ss_dssp EEEEECCCTTCBCSSTTG----------GGSBCTTHHHHHHHHHEEE--EEEEEECSCC
T ss_pred EEEEECccccccCCcccc----------eeecCcHHHHHHHHHHHhc--CCEEEEeeec
Confidence 999999995321111000 1122222234444444443 6899988753
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.43 E-value=0.00014 Score=51.02 Aligned_cols=39 Identities=26% Similarity=0.364 Sum_probs=34.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
++||+||+||+|....+..-..|++|+.+++++++.+.+
T Consensus 34 ~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~ 72 (177)
T d1o89a2 34 EIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL 72 (177)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH
T ss_pred cEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH
Confidence 799999999999998888888999999999999886544
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.42 E-value=0.0018 Score=43.35 Aligned_cols=112 Identities=10% Similarity=0.033 Sum_probs=69.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++-|+|+ |.+|.++|..++.++. ++++.+.++++++....++.+. .........|..+ +
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~~--------------~ 65 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYAD--------------L 65 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGGG--------------G
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHHH--------------h
Confidence 46788897 8999999999998874 8999999998877766665532 1223332222111 1
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV 138 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 138 (202)
..-|++|.++|...... .+. .+.+..|.. +++...+.+.+. ..+.++++|..
T Consensus 66 -~~adivvitag~~~~~g---~~r---~dl~~~N~~----I~~~i~~~i~~~~p~aivivvtNP 118 (140)
T d1a5za1 66 -KGSDVVIVAAGVPQKPG---ETR---LQLLGRNAR----VMKEIARNVSKYAPDSIVIVVTNP 118 (140)
T ss_dssp -TTCSEEEECCCCCCCSS---CCH---HHHHHHHHH----HHHHHHHHHHHHCTTCEEEECSSS
T ss_pred -cCCCEEEEecccccCCC---cch---hhhhccccc----hHHHHHHHHHhcCCCcEEEEeCCc
Confidence 35799999999754321 222 233445543 455555555554 34566666543
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.41 E-value=0.0021 Score=43.27 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=67.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++.|+||+|.+|.++|..|+.+|. ++++.+.++.+. ....+.+..... ....-+. .++..+ . + ..-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~--~a~Dl~~~~~~~-~~~~~~~-~~~~~~---~----~-~~a 69 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG--VAADLSHIETRA-TVKGYLG-PEQLPD---C----L-KGC 69 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH--HHHHHTTSSSSC-EEEEEES-GGGHHH---H----H-TTC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccch--hhHHHhhhhhhc-CCCeEEc-CCChHH---H----h-CCC
Confidence 688999999999999999998885 799999876433 233443322111 1111111 122111 1 1 357
Q ss_pred cEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 80 NILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 80 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
|++|..+|.... +- .+. .+.++.|..-.-.+++.+ .+. ..+.++.+|...
T Consensus 70 DivVitag~~~~-~g--~sR---~~ll~~N~~i~~~i~~~i----~~~~p~~iiivvtNPv 120 (144)
T d1mlda1 70 DVVVIPAGVPRK-PG--MTR---DDLFNTNATIVATLTAAC----AQHCPDAMICIISNPV 120 (144)
T ss_dssp SEEEECCSCCCC-TT--CCG---GGGHHHHHHHHHHHHHHH----HHHCTTSEEEECSSCH
T ss_pred CEEEECCCcCCC-CC--CCc---chHHHHHHHHHHHHHHHH----HhcCCCeEEEEecCch
Confidence 999999997432 21 122 234556666554444444 433 356777777654
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.40 E-value=0.0028 Score=42.46 Aligned_cols=113 Identities=11% Similarity=0.001 Sum_probs=69.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--EEEEEeCC--hhHHHHHHHHHHh---cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRN--QIELDARLHEWKN---KGFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~--~~~~~~~~~~~~~---~~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
++-|+||+|.+|.++|..+..++. ++++.+.+ ++..+....++.+ ..........|..+
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~~-------------- 67 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYED-------------- 67 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGGG--------------
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHHH--------------
Confidence 578999999999999999999986 78898853 3444444444443 23333333333211
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCC-CCeEEEecCCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASG-NGSIVFISSVG 139 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~ 139 (202)
. ..-|++|.+||.... +- .+ =.+.++.|.. +++...+.+.+.. .+.++.+|...
T Consensus 68 ~-~~aDiVvitaG~~~~-~g--~~---R~dl~~~N~~----I~~~i~~~i~~~~p~~i~ivvtNPv 122 (142)
T d1o6za1 68 T-AGSDVVVITAGIPRQ-PG--QT---RIDLAGDNAP----IMEDIQSSLDEHNDDYISLTTSNPV 122 (142)
T ss_dssp G-TTCSEEEECCCCCCC-TT--CC---HHHHHHHHHH----HHHHHHHHHHTTCSCCEEEECCSSH
T ss_pred h-hhcCEEEEecccccc-cC--Cc---hhhHHHHHHH----HHHHHHHHHHhcCCCceEEEecChH
Confidence 2 357999999996432 21 23 2345556654 5555566566553 56666666543
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.37 E-value=0.00026 Score=50.34 Aligned_cols=44 Identities=18% Similarity=0.134 Sum_probs=38.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK 45 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~ 45 (202)
|++.|.|| |-+|..+|..++..|++|++.+++++.+++..+.+.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~ 48 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIE 48 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHH
Confidence 67899999 799999999999999999999999988777666543
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.37 E-value=0.00011 Score=51.22 Aligned_cols=101 Identities=21% Similarity=0.162 Sum_probs=64.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
++||+||+||+|...++..-..|++|+.+++++++.+.+.+ .+.+.....-| . ..+.+....++.+|+
T Consensus 26 ~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~----lGad~vi~~~~-----~---~~~~~~~~~~~gvd~ 93 (167)
T d1tt7a2 26 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ----LGASEVISRED-----V---YDGTLKALSKQQWQG 93 (167)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH----HTCSEEEEHHH-----H---CSSCCCSSCCCCEEE
T ss_pred EEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh----hcccceEeccc-----h---hchhhhcccCCCceE
Confidence 58999999999999988877889999999999888766543 24433221111 0 011111122356999
Q ss_pred EEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCcc
Q 028868 82 LINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVR 142 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~ 142 (202)
++.+.|.. . +...++.++. .|++|.++...+..
T Consensus 94 vid~vgg~-----------~---------------~~~~~~~l~~--~G~iv~~G~~~g~~ 126 (167)
T d1tt7a2 94 AVDPVGGK-----------Q---------------LASLLSKIQY--GGSVAVSGLTGGGE 126 (167)
T ss_dssp EEESCCTH-----------H---------------HHHHHTTEEE--EEEEEECCCSSCSC
T ss_pred EEecCcHH-----------H---------------HHHHHHHhcc--CceEEEeeccCCCc
Confidence 99998841 1 1122334443 68999988876543
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=97.37 E-value=0.0035 Score=41.93 Aligned_cols=113 Identities=14% Similarity=0.025 Sum_probs=68.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~ 74 (202)
+++.|+|| |.+|.+++..++..|. ++++.+.++++++.....+.+. ..+..+...+.- + .
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~~--~-----------~ 66 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDY--A-----------D 66 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCG--G-----------G
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCCH--H-----------H
Confidence 46788897 9999999999999884 8999999988776665555432 223333322211 1 1
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV 138 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 138 (202)
+ ..-|+++.++|...... .+. .+.++.|..= ++...+.+.+. +.+.++++|..
T Consensus 67 ~-~dadvvvitag~~~~~g---~~r---~~l~~~N~~i----~~~i~~~i~~~~p~aivivvtNP 120 (142)
T d1guza1 67 T-ANSDIVIITAGLPRKPG---MTR---EDLLMKNAGI----VKEVTDNIMKHSKNPIIIVVSNP 120 (142)
T ss_dssp G-TTCSEEEECCSCCCCTT---CCH---HHHHHHHHHH----HHHHHHHHHHHCSSCEEEECCSS
T ss_pred h-cCCeEEEEEEecCCCCC---Cch---HHHHHHHHHH----HHHHHHHhhccCCCeEEEEecCC
Confidence 2 35799999999753221 222 2344555543 33334433433 34566666553
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=97.35 E-value=0.00035 Score=48.77 Aligned_cols=75 Identities=15% Similarity=0.159 Sum_probs=50.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCC-Cc
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQG-KL 79 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~-~i 79 (202)
+++|.|+ |++|...++.+-..|+ +|+++++++++++.+.+ + |.+. + +|..+++.. +++.+..++ .+
T Consensus 30 ~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-l---Ga~~-~--i~~~~~~~~----~~v~~~t~g~G~ 97 (174)
T d1jqba2 30 SVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-Y---GATD-I--LNYKNGHIE----DQVMKLTNGKGV 97 (174)
T ss_dssp CEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-H---TCSE-E--ECGGGSCHH----HHHHHHTTTSCE
T ss_pred EEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh-h---Cccc-c--ccccchhHH----HHHHHHhhccCc
Confidence 5889987 8999998888888898 79999999887766543 3 3222 2 233332222 333333323 49
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.++|.
T Consensus 98 D~vid~~g~ 106 (174)
T d1jqba2 98 DRVIMAGGG 106 (174)
T ss_dssp EEEEECSSC
T ss_pred ceEEEccCC
Confidence 999999995
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=97.34 E-value=0.00036 Score=48.60 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=52.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
.+++|.|+ +|+|...+..+...|+ +|+++++++++.+.+.+ .+..-.+...|-. +.+.+..+.. .++.+
T Consensus 30 dtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~----~Ga~~~i~~~~~~--~~~~~~~~~~---~~~G~ 99 (176)
T d2jhfa2 30 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGATECVNPQDYK--KPIQEVLTEM---SNGGV 99 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSEEECGGGCS--SCHHHHHHHH---TTSCB
T ss_pred CEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHH----hCCeeEEecCCch--hHHHHHHHHH---hcCCC
Confidence 37999999 6899999999999986 89999999988766543 2332222112221 2233333332 23579
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.+.|.
T Consensus 100 D~vid~~G~ 108 (176)
T d2jhfa2 100 DFSFEVIGR 108 (176)
T ss_dssp SEEEECSCC
T ss_pred CEEEecCCc
Confidence 999999995
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.34 E-value=0.0011 Score=45.71 Aligned_cols=74 Identities=15% Similarity=0.122 Sum_probs=49.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|.|+ |++|...++.+-..|++|+++++++++++.+. ++ |.+..+-..+..+ ..+ + ..+..|
T Consensus 29 ~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~l---Ga~~~i~~~~~~~------~~~---~-~~~~~d 93 (168)
T d1piwa2 29 KKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KM---GADHYIATLEEGD------WGE---K-YFDTFD 93 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HH---TCSEEEEGGGTSC------HHH---H-SCSCEE
T ss_pred CEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-cc---CCcEEeeccchHH------HHH---h-hhcccc
Confidence 36899987 89999988877788999999999988876554 23 4433332223222 111 1 225689
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
.++.+.+..
T Consensus 94 ~vi~~~~~~ 102 (168)
T d1piwa2 94 LIVVCASSL 102 (168)
T ss_dssp EEEECCSCS
T ss_pred eEEEEecCC
Confidence 999988754
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.31 E-value=0.0011 Score=46.11 Aligned_cols=84 Identities=15% Similarity=0.190 Sum_probs=60.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH---------------HhcCCeEEEEEecCCCHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW---------------KNKGFKVTGSVCDLSSREQREK 66 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~---------------~~~~~~v~~~~~Dv~~~~~i~~ 66 (202)
.+-|.|. |-+|.++|+.|++.|++|++.+|++++.+.+.+.- .+.-.+...+...+.+.+.+.+
T Consensus 4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~ 82 (176)
T d2pgda2 4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN 82 (176)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence 3567777 89999999999999999999999998887765431 1111223445556677778888
Q ss_pred HHHHHHHHhCCCccEEEEcCC
Q 028868 67 LIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 67 ~~~~~~~~~~~~id~vi~~ag 87 (202)
..+.+.... .+=+++|....
T Consensus 83 v~~~l~~~~-~~g~iiid~sT 102 (176)
T d2pgda2 83 FIEKLVPLL-DIGDIIIDGGN 102 (176)
T ss_dssp HHHHHHHHC-CTTCEEEECSC
T ss_pred HHHHHHhcc-ccCcEEEecCc
Confidence 888877765 34466676654
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.31 E-value=0.00073 Score=45.85 Aligned_cols=75 Identities=13% Similarity=0.002 Sum_probs=57.7
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEE
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNIL 82 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~v 82 (202)
++|.|. |.+|..+++.|.++|..|++++.+++......++... ..+.++..|.++++.++++-- ...+.+
T Consensus 6 iII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~--~~~~vi~Gd~~d~~~L~~a~i-------~~a~~v 75 (153)
T d1id1a_ 6 FIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG--DNADVIPGDSNDSSVLKKAGI-------DRCRAI 75 (153)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC--TTCEEEESCTTSHHHHHHHTT-------TTCSEE
T ss_pred EEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc--CCcEEEEccCcchHHHHHhcc-------ccCCEE
Confidence 678887 6999999999999999999999998877666666543 347788899999776544322 357888
Q ss_pred EEcCC
Q 028868 83 INNAA 87 (202)
Q Consensus 83 i~~ag 87 (202)
|...+
T Consensus 76 i~~~~ 80 (153)
T d1id1a_ 76 LALSD 80 (153)
T ss_dssp EECSS
T ss_pred EEccc
Confidence 77654
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.29 E-value=0.0048 Score=41.27 Aligned_cols=112 Identities=10% Similarity=-0.023 Sum_probs=69.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEe-cCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK----GFKVTGSVC-DLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~-Dv~~~~~i~~~~~~~~~ 73 (202)
+++.|+|+ |.+|.++|..++.+|. ++++.+.++++.+....++.+. ......... |..+
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~~------------- 66 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYSL------------- 66 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGGG-------------
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHHH-------------
Confidence 57888897 9999999999998885 7999999998876665555432 222222222 3211
Q ss_pred HhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCC
Q 028868 74 IFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV 138 (202)
Q Consensus 74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 138 (202)
+ ..-|++|..+|...... .+. .+.+..|.. +.+...+.+.+. ..+.++.+|..
T Consensus 67 -~-~~adiVvitag~~~~~g---~~r---~~l~~~n~~----i~~~i~~~i~~~~p~aivivvtNP 120 (142)
T d1ojua1 67 -L-KGSEIIVVTAGLARKPG---MTR---LDLAHKNAG----IIKDIAKKIVENAPESKILVVTNP 120 (142)
T ss_dssp -G-TTCSEEEECCCCCCCSS---CCH---HHHHHHHHH----HHHHHHHHHHTTSTTCEEEECSSS
T ss_pred -h-ccccEEEEeccccCCCC---Cch---HHHHHHhhH----HHHHHHHHHHhhCCCcEEEEecCC
Confidence 1 35799999999653221 222 334444544 444455555554 34566666553
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.27 E-value=0.0072 Score=40.52 Aligned_cols=116 Identities=13% Similarity=0.062 Sum_probs=67.5
Q ss_pred CEEEEecCCCchHHHHHHHHHH-CC--CEEEEEeCChhHHHHHHHHHHhcCCeEEEE-EecCCCHHHHHHHHHHHHHHhC
Q 028868 1 MTALVTGGTRGIGHATVEELAR-FG--AIVHTCSRNQIELDARLHEWKNKGFKVTGS-VCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~-~g--~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~-~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
+++.|+|++|.+|.++|..|+. .+ .++++.+..+ ..+....++.+.......- ..+-.+.+ .+
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~-------~~----- 67 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATP-------AL----- 67 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHH-------HH-----
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCcc-------cc-----
Confidence 5789999999999999998864 34 5899999764 4555555665543222111 11222211 11
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
..-|++|.++|...... .+. .+.++.|..-. +...+.+.+. ..+.++++|...
T Consensus 68 ~~aDvvvitaG~~~k~g---~~R---~dl~~~N~~i~----~~v~~~i~~~~p~aivivvtNPv 121 (145)
T d2cmda1 68 EGADVVLISAGVRRKPG---MDR---SDLFNVNAGIV----KNLVQQVAKTCPKACIGIITNPV 121 (145)
T ss_dssp TTCSEEEECCSCCCCTT---CCG---GGGHHHHHHHH----HHHHHHHHHHCTTSEEEECSSSH
T ss_pred CCCCEEEECCCccCCCC---cch---hhHHHHHHHHH----HHHHHHHHhhCCCcEEEEccCCc
Confidence 24699999999753222 122 23455665433 3334444433 356777777654
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.21 E-value=0.004 Score=42.23 Aligned_cols=114 Identities=11% Similarity=0.049 Sum_probs=64.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC---------EEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA---------IVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~---------~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
++.|+||+|.+|.+++..|+..+. +++..+++.++++....++.... .....+...-.+.
T Consensus 6 KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 75 (154)
T d1y7ta1 6 RVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPK---------- 75 (154)
T ss_dssp EEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHH----------
T ss_pred EEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchh----------
Confidence 689999999999999999997652 23334455556655555554432 1222222221111
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-C-CCeEEEecC
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-G-NGSIVFISS 137 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~~~iv~vsS 137 (202)
+.+ ..-|++|.++|.... ...+. .+.++.|+.- ++.+.+.+.+. + ...|+.+|.
T Consensus 76 -~~~-~~advViitaG~~~~---pg~~r---~dl~~~N~~i----~~~~~~~i~k~a~~~~~vivvsN 131 (154)
T d1y7ta1 76 -VAF-KDADYALLVGAAPRK---AGMER---RDLLQVNGKI----FTEQGRALAEVAKKDVKVLVVGN 131 (154)
T ss_dssp -HHT-TTCSEEEECCCCCCC---TTCCH---HHHHHHHHHH----HHHHHHHHHHHSCTTCEEEECSS
T ss_pred -hhc-ccccEEEeecCcCCC---CCCcH---HHHHHHHHHH----HHHHHHHHHHhCCCCcEEEEecC
Confidence 112 468999999997532 12333 3345556553 34444444542 3 345656654
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.21 E-value=0.0019 Score=44.23 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=48.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|.|+ |++|...++.+-..|++|+.+++++++++.+. +.+.+.. .|-++++..+.+. +.. ...+
T Consensus 29 ~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~----~~Ga~~~---i~~~~~~~~~~~~----~~~-~g~~ 95 (166)
T d1llua2 29 QWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR----KLGASLT---VNARQEDPVEAIQ----RDI-GGAH 95 (166)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEE---EETTTSCHHHHHH----HHH-SSEE
T ss_pred CEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh----ccCcccc---ccccchhHHHHHH----Hhh-cCCc
Confidence 36889886 89999988888888999999999988876543 2343322 2444444443333 233 3455
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.+|.+++
T Consensus 96 ~~i~~~~ 102 (166)
T d1llua2 96 GVLVTAV 102 (166)
T ss_dssp EEEECCS
T ss_pred ccccccc
Confidence 5555555
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.19 E-value=0.0022 Score=43.00 Aligned_cols=112 Identities=11% Similarity=0.025 Sum_probs=64.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|+ |.+|.++|..++.++. ++++.++++++.+....++.+.. ........| . +..
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~-----------~~~ 66 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---Y-----------SDV 66 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---G-----------GGG
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---H-----------HHh
Confidence 35778897 9999999999999875 89999999987766666665431 122211111 1 112
Q ss_pred CCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCC
Q 028868 76 QGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV 138 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 138 (202)
..-|++|.++|.... + ..+ -.+.+..|.. +++.+.+.+.+. ..+.++++|..
T Consensus 67 -~~adivvitag~~~~-~--~~~---r~~l~~~N~~----i~~~i~~~i~~~~p~ai~ivvtNP 119 (142)
T d1y6ja1 67 -KDCDVIVVTAGANRK-P--GET---RLDLAKKNVM----IAKEVTQNIMKYYNHGVILVVSNP 119 (142)
T ss_dssp -TTCSEEEECCCC---------C---HHHHHHHHHH----HHHHHHHHHHHHCCSCEEEECSSS
T ss_pred -CCCceEEEecccccC-c--Ccc---hhHHhhHHHH----HHHHHHHHhhccCCCceEEEecCh
Confidence 357999999996532 1 112 2344556654 444445555543 45666666654
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.19 E-value=0.0077 Score=40.29 Aligned_cols=112 Identities=12% Similarity=0.087 Sum_probs=68.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
++.|+|+ |.+|.++|..++.+|. ++++.+.++++.+....++.+. .........+-.+ . .
T Consensus 3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~---------~----~- 67 (143)
T d1llda1 3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE---------I----C- 67 (143)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG---------G----G-
T ss_pred EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHH---------H----h-
Confidence 5778897 9999999999999886 8999999998877766666543 1122222222111 1 1
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCC
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV 138 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 138 (202)
..-|++|.++|.... + ..+. .+.+..|.. +++...+-+.+. ..+.++.+|..
T Consensus 68 ~daDvVVitaG~~~~-~--g~~R---~dl~~~N~~----i~~~i~~~i~~~~p~ai~ivvtNP 120 (143)
T d1llda1 68 RDADMVVITAGPRQK-P--GQSR---LELVGATVN----ILKAIMPNLVKVAPNAIYMLITNP 120 (143)
T ss_dssp TTCSEEEECCCCCCC-T--TCCH---HHHHHHHHH----HHHHHHHHHHHHCTTSEEEECCSS
T ss_pred hCCcEEEEecccccC-C--CCch---hhhhhhhHH----HHHHHHHHHHhhCCCeEEEEeCCc
Confidence 246999999996432 1 1232 245556654 334444444443 34666666654
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.19 E-value=0.012 Score=40.71 Aligned_cols=113 Identities=12% Similarity=0.095 Sum_probs=63.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCC---C----EEEEEeCCh--hHHHHHHHHHHhcCC-eE-EEEEecCCCHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFG---A----IVHTCSRNQ--IELDARLHEWKNKGF-KV-TGSVCDLSSREQREKLIET 70 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g---~----~Vi~~~r~~--~~~~~~~~~~~~~~~-~v-~~~~~Dv~~~~~i~~~~~~ 70 (202)
+|.||||+|+||.+++..|++.+ . .+.+.+.+. +.++....++.+... .. .....+ +.
T Consensus 26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~~--~~--------- 94 (175)
T d7mdha1 26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIGI--DP--------- 94 (175)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEES--CH---------
T ss_pred EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccccc--cc---------
Confidence 48999999999999999999743 2 344555443 345555555544321 11 122121 21
Q ss_pred HHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-C-CCeEEEecC
Q 028868 71 VTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-G-NGSIVFISS 137 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-~~~iv~vsS 137 (202)
.+.+ ...|++|..+|.... + ..+ -.+.++.|.. +.+...+.+.+. + ...|+.+|.
T Consensus 95 -~~~~-~~aDvVvi~ag~~rk-p--g~t---R~Dll~~N~~----I~k~~~~~i~~~a~~~~~vlvv~N 151 (175)
T d7mdha1 95 -YEVF-EDVDWALLIGAKPRG-P--GME---RAALLDINGQ----IFADQGKALNAVASKNVKVLVVGN 151 (175)
T ss_dssp -HHHT-TTCSEEEECCCCCCC-T--TCC---HHHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred -hhhc-cCCceEEEeeccCCC-C--CCc---HHHHHHHHHH----HHHHHHHHHHhhCCCCcEEEEecC
Confidence 1223 478999999997532 1 123 3455666654 444445555552 3 345556554
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.12 E-value=0.0063 Score=40.64 Aligned_cols=112 Identities=10% Similarity=0.066 Sum_probs=67.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEe-cCCCHHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVC-DLSSREQREKLIETVTSI 74 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~-Dv~~~~~i~~~~~~~~~~ 74 (202)
|++-|+|+ |.+|.++|..|+.++. .+++.+.++++.+.....+.+. +....+... |..+
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~-------------- 66 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD-------------- 66 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence 57888897 9999999999998875 8999999888776666665432 222222222 2221
Q ss_pred hCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCC
Q 028868 75 FQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV 138 (202)
Q Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 138 (202)
. ..-|++|.+||...... ..-.+.+..|.. +++...+-+.+. ..+.++.+|..
T Consensus 67 ~-~~advvvitag~~~~~~------~~r~dl~~~N~~----i~~~i~~~i~k~~p~aivivvtNP 120 (142)
T d1uxja1 67 T-ANSDVIVVTSGAPRKPG------MSREDLIKVNAD----ITRACISQAAPLSPNAVIIMVNNP 120 (142)
T ss_dssp G-TTCSEEEECCSCC---------------CHHHHHH----HHHHHHHHHGGGCTTCEEEECSSS
T ss_pred h-cCCCEEEEeeeccCCcC------cchhHHHhHHHH----HHHHHHHHHhccCCCceEEEeCCc
Confidence 1 35699999999753211 112234445543 555666655554 45666665553
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.12 E-value=0.0014 Score=44.86 Aligned_cols=85 Identities=12% Similarity=0.070 Sum_probs=56.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-------hcCCeEEEEEecCCCHHHHHHHH---HH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-------NKGFKVTGSVCDLSSREQREKLI---ET 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-------~~~~~v~~~~~Dv~~~~~i~~~~---~~ 70 (202)
|++-|.|. |-+|.++|+.|++.|++|++.+|++++.+.+.+.-. +.-.+..++..=+.+.+.+++++ +.
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~ 79 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG 79 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcc
Confidence 46777877 899999999999999999999999988777654210 00112344445566777777776 33
Q ss_pred HHHHhCCCccEEEEcCC
Q 028868 71 VTSIFQGKLNILINNAA 87 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag 87 (202)
+.... .+=+++|....
T Consensus 80 ~~~~~-~~g~iiid~sT 95 (161)
T d1vpda2 80 IIEGA-KPGTVLIDMSS 95 (161)
T ss_dssp HHHHC-CTTCEEEECSC
T ss_pred hhhcc-CCCCEEEECCC
Confidence 44333 23456666544
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=97.09 E-value=0.0031 Score=42.86 Aligned_cols=117 Identities=12% Similarity=-0.023 Sum_probs=67.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+++.|+|+ |.+|..+|..+...+. ++++.+.++++++.....+.+. +.+......+ +.+ +. .
T Consensus 8 ~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~--~~~------~~----~ 74 (154)
T d1pzga1 8 KKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEY--SYE------AA----L 74 (154)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEEC--SHH------HH----H
T ss_pred CcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccC--chh------hh----h
Confidence 46888998 9999999998888885 8999999988877776666542 2222222111 111 11 1
Q ss_pred CCCccEEEEcCCCCCCCCC--CCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCC
Q 028868 76 QGKLNILINNAAIAFVKPT--VDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSV 138 (202)
Q Consensus 76 ~~~id~vi~~ag~~~~~~~--~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~ 138 (202)
..-|++|.++|......- .+.+. .+.+..|..- ++...+-+.+. ..+.++.+|..
T Consensus 75 -~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~~i----v~~i~~~i~~~~p~aiviivsNP 132 (154)
T d1pzga1 75 -TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNSKI----IREIGQNIKKYCPKTFIIVVTNP 132 (154)
T ss_dssp -TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHHHH----HHHHHHHHHHHCTTCEEEECCSS
T ss_pred -cCCCeEEEecccccCCCCCCcccch---hhhhhhhHHH----HHHHHHHHHhcCCCcEEEEeCCc
Confidence 357999999997532211 11121 1233445443 33344434433 35666666654
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=97.06 E-value=0.0025 Score=43.96 Aligned_cols=78 Identities=15% Similarity=0.155 Sum_probs=49.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
.+++|.|+ ||+|...++.+...|+ +|+.+++++++++.+ .++ |.+-.+..-|- .+.+.+... +..++.+
T Consensus 30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~l---Ga~~~i~~~~~--~~~~~~~~~---~~~~~g~ 99 (176)
T d2fzwa2 30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEF---GATECINPQDF--SKPIQEVLI---EMTDGGV 99 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHH---TCSEEECGGGC--SSCHHHHHH---HHTTSCB
T ss_pred CEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HHh---CCcEEEeCCch--hhHHHHHHH---HHcCCCC
Confidence 36899998 5999999999999997 677788888776544 344 33222211111 122333333 3333579
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.+.|.
T Consensus 100 D~vid~~G~ 108 (176)
T d2fzwa2 100 DYSFECIGN 108 (176)
T ss_dssp SEEEECSCC
T ss_pred cEeeecCCC
Confidence 999999984
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.06 E-value=0.00073 Score=46.96 Aligned_cols=41 Identities=24% Similarity=0.100 Sum_probs=37.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLH 42 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~ 42 (202)
|++-|.|+ |.+|.++|..|.++|+.|.+.+|++++.+...+
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~ 42 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD 42 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 78999999 899999999999999999999999887766554
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.05 E-value=0.00079 Score=45.59 Aligned_cols=79 Identities=13% Similarity=0.132 Sum_probs=52.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++.|+|+.|-+|..+|+.|.+.|++|.+.+|+......... ...+......++ ..+...+.++.... .+=.
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~----~~~~~v~~~~~~---~~~~~v~~~~~~~~-~~~~ 81 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL----ANADVVIVSVPI---NLTLETIERLKPYL-TENM 81 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH----TTCSEEEECSCG---GGHHHHHHHHGGGC-CTTS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh----hhccccccccch---hhheeeeecccccc-cCCc
Confidence 578999999999999999999999999999998765443321 233444444443 34555566655543 2223
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++..+.
T Consensus 82 iiiD~~S 88 (152)
T d2pv7a2 82 LLADLTS 88 (152)
T ss_dssp EEEECCS
T ss_pred eEEEecc
Confidence 4444443
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=97.04 E-value=0.0015 Score=45.45 Aligned_cols=78 Identities=14% Similarity=0.055 Sum_probs=50.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
.+++|.|+ |+||...++.+-..|+ +|+++++++++++.+.+ .+.+.. +...-.+ +.++...+.. .++.+
T Consensus 30 ~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~----~Ga~~~-i~~~~~~-~~~~~~~~~~---~~~G~ 99 (174)
T d1e3ia2 30 STCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGATDC-LNPRELD-KPVQDVITEL---TAGGV 99 (174)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCSEE-ECGGGCS-SCHHHHHHHH---HTSCB
T ss_pred CEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHH----hCCCcc-cCCccch-hhhhhhHhhh---hcCCC
Confidence 36899986 9999999999999998 68889999888755442 233222 2111111 1222222222 24679
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.++|.
T Consensus 100 d~vie~~G~ 108 (174)
T d1e3ia2 100 DYSLDCAGT 108 (174)
T ss_dssp SEEEESSCC
T ss_pred cEEEEeccc
Confidence 999999994
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=97.02 E-value=0.0022 Score=44.46 Aligned_cols=77 Identities=14% Similarity=0.126 Sum_probs=51.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHH-HHHHHHHHHHHHhCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSRE-QREKLIETVTSIFQGK 78 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~-~i~~~~~~~~~~~~~~ 78 (202)
.+++|.|+ |++|...++.+...|+ +|+++++++++++.+.+ .+.+..+ |.++.+ .+.+.... ..++.
T Consensus 29 ~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~----lGa~~~i---~~~~~d~~~~~~~~~---~~~~G 97 (174)
T d1p0fa2 29 STCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGATECL---NPKDYDKPIYEVICE---KTNGG 97 (174)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCSEEE---CGGGCSSCHHHHHHH---HTTSC
T ss_pred CEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH----cCCcEEE---cCCCchhHHHHHHHH---hcCCC
Confidence 36899997 8999999999999997 79999999988866643 3433222 222211 12222222 22356
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
.|++|-++|.
T Consensus 98 ~d~vid~~g~ 107 (174)
T d1p0fa2 98 VDYAVECAGR 107 (174)
T ss_dssp BSEEEECSCC
T ss_pred CcEEEEcCCC
Confidence 9999999884
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.00 E-value=0.0015 Score=47.40 Aligned_cols=69 Identities=26% Similarity=0.179 Sum_probs=44.9
Q ss_pred CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCCC
Q 028868 9 TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 9 s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag~ 88 (202)
||.+|.++|+.++.+|+.|.++.-.... .....+..+ .+...++.. +.+.+.+ ...|++|++|.+
T Consensus 31 SGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~--~~~t~~~m~---~~~~~~~-~~~D~~i~aAAv 95 (223)
T d1u7za_ 31 SGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRV--DVMTALEME---AAVNASV-QQQNIFIGCAAV 95 (223)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEE--ECCSHHHHH---HHHHHHG-GGCSEEEECCBC
T ss_pred cHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccc--eehhhHHHH---HHHHhhh-ccceeEeeeech
Confidence 5789999999999999999877654311 112234433 334444443 3444444 467999999998
Q ss_pred CCCC
Q 028868 89 AFVK 92 (202)
Q Consensus 89 ~~~~ 92 (202)
+...
T Consensus 96 sDf~ 99 (223)
T d1u7za_ 96 ADYR 99 (223)
T ss_dssp CSEE
T ss_pred hhhh
Confidence 7543
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.99 E-value=0.00049 Score=48.52 Aligned_cols=43 Identities=21% Similarity=0.138 Sum_probs=37.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
|++-|.|| |-||..+|..++..|++|++.+++++.+++..+.+
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i 47 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEA 47 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhh
Confidence 46889999 89999999999999999999999998877765554
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.97 E-value=0.011 Score=39.77 Aligned_cols=118 Identities=10% Similarity=-0.012 Sum_probs=69.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc----CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK----GFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~----~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
++-|+|+ |.+|.++|..+..++. ++++.++++++.+....++.+. +.+......+.. +..
T Consensus 5 KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~-------------~~~- 69 (150)
T d1t2da1 5 KIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-------------DDL- 69 (150)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-------------GGG-
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc-------------ccc-
Confidence 5788896 8999999988887775 8999999988877776666542 233333333211 112
Q ss_pred CCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CCCeEEEecCCC
Q 028868 77 GKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GNGSIVFISSVG 139 (202)
Q Consensus 77 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~vsS~~ 139 (202)
..-|++|.++|........+... .=.+.+..|. .+++.+.+.+++. ..+.++++|...
T Consensus 70 ~~advvvitag~~~~~g~~~~~~-~R~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtNPv 128 (150)
T d1t2da1 70 AGADVVIVTAGFTKAPGKSDKEW-NRDDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTNPV 128 (150)
T ss_dssp TTCSEEEECCSCSSCTTCCSTTC-CGGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSSSH
T ss_pred CCCcEEEEecccccCCCCCcccc-chhHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecCch
Confidence 35799999999753221111110 0122344554 3445555555544 345666666643
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=96.90 E-value=0.0025 Score=43.91 Aligned_cols=76 Identities=17% Similarity=0.191 Sum_probs=49.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
.+++|.|+ |++|...++.+...|+ +|+++++++++++.+.+ .+.+. ++ |-. .+.++...+. ..+..+
T Consensus 34 ~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~ga~~-~i--~~~-~~~~~~~~~~---~~~~g~ 101 (172)
T d1h2ba2 34 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----LGADH-VV--DAR-RDPVKQVMEL---TRGRGV 101 (172)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----TTCSE-EE--ETT-SCHHHHHHHH---TTTCCE
T ss_pred CEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----cccce-ee--cCc-ccHHHHHHHh---hCCCCc
Confidence 36889886 9999999888888887 77788888877665543 33332 22 222 2333333322 122369
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
|++|.++|.
T Consensus 102 d~vid~~g~ 110 (172)
T d1h2ba2 102 NVAMDFVGS 110 (172)
T ss_dssp EEEEESSCC
T ss_pred eEEEEecCc
Confidence 999999994
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.89 E-value=0.00088 Score=46.30 Aligned_cols=43 Identities=19% Similarity=0.213 Sum_probs=37.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~ 44 (202)
|+++|.|+ ||.+++++..|.+.|. +|.++.|+.++.+.+.+.+
T Consensus 18 ~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~ 61 (167)
T d1npya1 18 AKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY 61 (167)
T ss_dssp SCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence 46899988 8999999999999997 7999999998887776654
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.88 E-value=0.0077 Score=41.30 Aligned_cols=84 Identities=17% Similarity=0.198 Sum_probs=60.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+++|.|+ |-.|++-++.....|++|.+.+.++++++.+...+.. .+.+ -.++.+.+++.+. .-|+
T Consensus 34 ~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~---~~~~---~~~~~~~l~~~~~--------~aDi 98 (168)
T d1pjca1 34 KVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVEL---LYSNSAEIETAVA--------EADL 98 (168)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSEE---EECCHHHHHHHHH--------TCSE
T ss_pred EEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc---ccee---ehhhhhhHHHhhc--------cCcE
Confidence 5889998 6999999999999999999999999988877665533 2222 2345555544443 4699
Q ss_pred EEEcCCCCCCCCCCCCCHH
Q 028868 82 LINNAAIAFVKPTVDITAE 100 (202)
Q Consensus 82 vi~~ag~~~~~~~~~~~~~ 100 (202)
||.++-+...+...-++.+
T Consensus 99 vI~aalipG~~aP~lIt~~ 117 (168)
T d1pjca1 99 LIGAVLVPGRRAPILVPAS 117 (168)
T ss_dssp EEECCCCTTSSCCCCBCHH
T ss_pred EEEeeecCCcccCeeecHH
Confidence 9999987655544445544
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=96.88 E-value=0.0055 Score=42.12 Aligned_cols=77 Identities=17% Similarity=0.116 Sum_probs=49.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|.|+ |++|...+..+...|. +|+.+++++++++.+. +.|.+-.+-.-+-.+ ..++.... ..++.+|
T Consensus 31 ~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~----~~GAd~~in~~~~~~--~~~~~~~~---~~~~G~d 100 (175)
T d1cdoa2 31 TCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK----VFGATDFVNPNDHSE--PISQVLSK---MTNGGVD 100 (175)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HTTCCEEECGGGCSS--CHHHHHHH---HHTSCBS
T ss_pred EEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH----HcCCcEEEcCCCcch--hHHHHHHh---hccCCcc
Confidence 6889986 7889888888888887 7889999988876554 334433321122111 12222222 1235799
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+++.++|.
T Consensus 101 ~vid~~G~ 108 (175)
T d1cdoa2 101 FSLECVGN 108 (175)
T ss_dssp EEEECSCC
T ss_pred eeeeecCC
Confidence 99999994
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=96.70 E-value=0.0009 Score=45.70 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=32.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL 37 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~ 37 (202)
|++.|.|+ |.||..++..|++.|+.|.+.+|++++.
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~ 36 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY 36 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence 68999999 9999999999999999999999987533
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.66 E-value=0.0064 Score=38.98 Aligned_cols=33 Identities=27% Similarity=0.295 Sum_probs=29.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.+|..+|..|.+.|.+|.++.|.+
T Consensus 23 ~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 55 (117)
T d1ebda2 23 KSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG 55 (117)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence 57889998 6999999999999999999998765
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.63 E-value=0.019 Score=39.01 Aligned_cols=82 Identities=10% Similarity=0.052 Sum_probs=55.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCChhHHHHHHHHHH------------hcCCeEEEEEecCCCHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQIELDARLHEWK------------NKGFKVTGSVCDLSSREQREK 66 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~~~~~~~~~~~~------------~~~~~v~~~~~Dv~~~~~i~~ 66 (202)
|+++|.|+ |-||.++|+.|.+.|+ +|++.+++++.++.+.+.-. ....++.++..- .+.+.+
T Consensus 2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p---~~~~~~ 77 (171)
T d2g5ca2 2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSP---VRTFRE 77 (171)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSC---HHHHHH
T ss_pred CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhccccccccccCC---chhhhh
Confidence 56899987 8999999999999996 78899999888776655311 001122222222 567788
Q ss_pred HHHHHHHHhCCCccEEEEcCC
Q 028868 67 LIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 67 ~~~~~~~~~~~~id~vi~~ag 87 (202)
.++++.... .+=.+++...+
T Consensus 78 vl~~l~~~~-~~~~ii~d~~s 97 (171)
T d2g5ca2 78 IAKKLSYIL-SEDATVTDQGS 97 (171)
T ss_dssp HHHHHHHHS-CTTCEEEECCS
T ss_pred hhhhhhccc-ccccccccccc
Confidence 888888776 33345555444
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=96.62 E-value=0.0067 Score=42.20 Aligned_cols=91 Identities=25% Similarity=0.162 Sum_probs=56.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHH---------------HHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQ---------------REK 66 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~---------------i~~ 66 (202)
+++|.|| |-.|++-++-....|++|.+.|.++++++.+.+.. ... +..+..+.+. .+.
T Consensus 31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~----~~~--i~~~~~~~~~~~~~~gyA~~~s~~~~~~ 103 (183)
T d1l7da1 31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG----GKF--ITVDDEAMKTAETAGGYAKEMGEEFRKK 103 (183)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT----CEE--CCC-----------------------CC
T ss_pred EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh----cce--EEEeccccccccccccchhhcCHHHHHH
Confidence 5789998 69999999999999999999999988877665432 211 1112111111 122
Q ss_pred HHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHH
Q 028868 67 LIETVTSIFQGKLNILINNAAIAFVKPTVDITAE 100 (202)
Q Consensus 67 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~ 100 (202)
..+.+.+.. ..-|+||-++-+...+...-++.+
T Consensus 104 ~~~~l~~~l-~~aDlVI~talipG~~aP~lit~~ 136 (183)
T d1l7da1 104 QAEAVLKEL-VKTDIAITTALIPGKPAPVLITEE 136 (183)
T ss_dssp HHHHHHHHH-TTCSEEEECCCCTTSCCCCCSCHH
T ss_pred HHHHHHHHH-HhhhhheeeeecCCcccceeehHH
Confidence 233344444 578999999987654443334544
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.57 E-value=0.0081 Score=41.43 Aligned_cols=42 Identities=17% Similarity=0.075 Sum_probs=35.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
++-|+|. |-+|.++|++|++.|++|.+.+|++++.+.+.++-
T Consensus 3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~ 44 (178)
T d1pgja2 3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKAN 44 (178)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHT
T ss_pred EEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC
Confidence 3556665 79999999999999999999999999888877653
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.54 E-value=0.01 Score=40.39 Aligned_cols=86 Identities=12% Similarity=0.097 Sum_probs=55.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH-------hcCCeEEEEEecCCCHHHHHHHHHH---
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK-------NKGFKVTGSVCDLSSREQREKLIET--- 70 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~-------~~~~~v~~~~~Dv~~~~~i~~~~~~--- 70 (202)
|+|-|.|. |-+|.++|++|.++|++|.+.+|+.++.+.+.+.-. +.......+..-+.+.+.++.++..
T Consensus 2 ~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~ 80 (162)
T d3cuma2 2 KQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG 80 (162)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred CEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence 45777766 899999999999999999999999887766543211 1112234455556666777766543
Q ss_pred HHHHhCCCccEEEEcCCC
Q 028868 71 VTSIFQGKLNILINNAAI 88 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~ 88 (202)
+.... .+=+++|.....
T Consensus 81 ~~~~l-~~g~iiid~st~ 97 (162)
T d3cuma2 81 LLAHI-APGTLVLECSTI 97 (162)
T ss_dssp HHHHS-CTTCEEEECSCC
T ss_pred ccccC-CCCCEEEECCCC
Confidence 33333 223556655543
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.54 E-value=0.014 Score=39.50 Aligned_cols=40 Identities=20% Similarity=0.214 Sum_probs=33.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
.+++|.|+ |++|...++.+...|++|+++++++++++...
T Consensus 29 ~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k 68 (168)
T d1rjwa2 29 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK 68 (168)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh
Confidence 36888875 89999988888889999999999988876543
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.50 E-value=0.0062 Score=39.51 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=29.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.||.++|..|.+.|.+|.++.+.+
T Consensus 24 ~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 24 KRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence 57889998 6999999999999999999988754
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.49 E-value=0.0026 Score=44.14 Aligned_cols=44 Identities=20% Similarity=0.199 Sum_probs=38.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKN 46 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~ 46 (202)
|+++|.|+ ||.+++++..|.+.| +|.+..|+.++.+.+.+.+..
T Consensus 19 k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~ 62 (177)
T d1nvta1 19 KNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE 62 (177)
T ss_dssp CEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred CEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence 67999988 699999999998777 999999999999888877753
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.49 E-value=0.0032 Score=42.53 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=37.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-CEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-AIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~~Vi~~~r~~~~~~~~~~~~ 44 (202)
+++.+.|+ |-+|.++++.|++.| ++|.+.+|++++.+.+.++.
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~ 44 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL 44 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc
Confidence 56788888 899999999999888 79999999998887776654
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=96.47 E-value=0.025 Score=38.07 Aligned_cols=114 Identities=12% Similarity=0.107 Sum_probs=59.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-------EEEEEeCCh--hHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-------IVHTCSRNQ--IELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-------~Vi~~~r~~--~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
++.|+||+|.+|.+++..|+..+. .+++.+.+. ++++....++.... ..... ...++. .
T Consensus 5 KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~---------~ 73 (154)
T d5mdha1 5 RVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKD--VIATDK---------E 73 (154)
T ss_dssp EEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEE--EEEESC---------H
T ss_pred EEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccc--cccCcc---------c
Confidence 689999999999999999986542 355555443 33444443333321 11111 111110 0
Q ss_pred HHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcC-CC-CeEEEecC
Q 028868 72 TSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKAS-GN-GSIVFISS 137 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~-~~iv~vsS 137 (202)
.+.+ ...|++|.++|....... +.+ +.++.|.. +.+...+.+.+. +. +.++.+|.
T Consensus 74 ~~~~-~~~dvVVitag~~~~~g~---sr~---dll~~N~~----i~k~~~~~i~k~a~~~~~iivvsN 130 (154)
T d5mdha1 74 EIAF-KDLDVAILVGSMPRRDGM---ERK---DLLKANVK----IFKCQGAALDKYAKKSVKVIVVGN 130 (154)
T ss_dssp HHHT-TTCSEEEECCSCCCCTTC---CTT---TTHHHHHH----HHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cccc-CCceEEEEecccCCCCCC---chh---HHHHHhHH----HHHHHHHHHHhhCCCceEEEEecC
Confidence 1112 468999999997643222 211 23445543 445555555443 33 34555554
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.43 E-value=0.0042 Score=42.58 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=50.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
.+++|.|+ |++|...++.+-..|++++++++++++.+.+ .++ +.+.. .|-.+.+.. .+. ...+|
T Consensus 32 ~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~l---Gad~~---i~~~~~~~~-------~~~-~~~~D 95 (168)
T d1uufa2 32 KKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KAL---GADEV---VNSRNADEM-------AAH-LKSFD 95 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHH---TCSEE---EETTCHHHH-------HTT-TTCEE
T ss_pred CEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH-hcc---CCcEE---EECchhhHH-------HHh-cCCCc
Confidence 46899986 8999998888888999999999998876433 333 43332 354444321 111 24699
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
++|.++|.
T Consensus 96 ~vid~~g~ 103 (168)
T d1uufa2 96 FILNTVAA 103 (168)
T ss_dssp EEEECCSS
T ss_pred eeeeeeec
Confidence 99999985
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.40 E-value=0.0095 Score=38.71 Aligned_cols=33 Identities=15% Similarity=0.180 Sum_probs=29.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.||..+|..|.+.|.+|.++.|.+
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence 57889998 6999999999999999999998853
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.39 E-value=0.0088 Score=38.46 Aligned_cols=33 Identities=15% Similarity=0.157 Sum_probs=29.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus 23 ~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 23 KKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp SEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence 57888888 7999999999999999999998853
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=96.32 E-value=0.0022 Score=42.07 Aligned_cols=70 Identities=16% Similarity=0.042 Sum_probs=49.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|.++|.|. |.+|+.+++.| +|..|++++.+++..+... .. .+.++..|.++++.++++- . .+-+
T Consensus 1 kHivI~G~-g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~----~~--~~~~i~Gd~~~~~~L~~a~------i-~~A~ 64 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLREL--RGSEVFVLAEDENVRKKVL----RS--GANFVHGDPTRVSDLEKAN------V-RGAR 64 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTS--CGGGEEEEESCTTHHHHHH----HT--TCEEEESCTTSHHHHHHTT------C-TTCS
T ss_pred CEEEEECC-CHHHHHHHHHH--cCCCCEEEEcchHHHHHHH----hc--CccccccccCCHHHHHHhh------h-hcCc
Confidence 67888887 68999999998 4666888888887765543 22 4678889999977655431 1 3567
Q ss_pred EEEEcC
Q 028868 81 ILINNA 86 (202)
Q Consensus 81 ~vi~~a 86 (202)
.+|...
T Consensus 65 ~vi~~~ 70 (129)
T d2fy8a1 65 AVIVNL 70 (129)
T ss_dssp EEEECC
T ss_pred EEEEec
Confidence 777644
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.27 E-value=0.013 Score=37.70 Aligned_cols=33 Identities=27% Similarity=0.140 Sum_probs=29.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.||..+|..|.+.|.+|.++.+..
T Consensus 23 ~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 23 GKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence 56889998 6999999999999999999888753
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.26 E-value=0.011 Score=37.79 Aligned_cols=33 Identities=21% Similarity=0.145 Sum_probs=29.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.+|.++|..|.+.|.+|.++.|.+
T Consensus 22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence 56888888 7999999999999999999998864
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.23 E-value=0.0098 Score=38.95 Aligned_cols=74 Identities=19% Similarity=0.240 Sum_probs=54.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEE-EeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHT-CSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~-~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
+++.|.|++|-+|+++++.+.++|+.++. .+++.... + ...++ -.|+|.++...+.++.+.++ ++
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~DV---vIDFS~p~~~~~~l~~~~~~---~~ 66 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPDV---VIDFSSPEALPKTVDLCKKY---RA 66 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCSE---EEECSCGGGHHHHHHHHHHH---TC
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCCE---EEEecCHHHHHHHHHHHHhc---CC
Confidence 57899999999999999999999998774 34432110 0 12233 45999999999999988776 35
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
-+|+-..|+
T Consensus 67 p~ViGTTG~ 75 (128)
T d1vm6a3 67 GLVLGTTAL 75 (128)
T ss_dssp EEEECCCSC
T ss_pred CEEEEcCCC
Confidence 677777774
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.20 E-value=0.017 Score=37.21 Aligned_cols=33 Identities=21% Similarity=0.236 Sum_probs=29.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.+|.++|..|.++|.+|.++.+.+
T Consensus 31 ~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~ 63 (121)
T d1d7ya2 31 SRLLIVGG-GVIGLELAATARTAGVHVSLVETQP 63 (121)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence 56888888 7999999999999999999998764
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.18 E-value=0.015 Score=37.61 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=28.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.+|..+|..|.+.|.+|.++.+.+
T Consensus 31 k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 31 NNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence 56888877 6999999999999999999987753
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.16 E-value=0.0022 Score=39.61 Aligned_cols=34 Identities=12% Similarity=0.073 Sum_probs=30.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
|+++|.|. |..|+++|+.|.++|++|.+.+.+..
T Consensus 6 K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 6 KNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 67899999 68899999999999999999998543
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.13 E-value=0.0059 Score=41.19 Aligned_cols=43 Identities=9% Similarity=0.013 Sum_probs=36.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
|++.|.|+ |-+|.++++.|.+.|++|++.+|+.++.++..+++
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~ 43 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL 43 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence 45677776 79999999999999999999999998887776655
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.13 E-value=0.013 Score=37.77 Aligned_cols=33 Identities=30% Similarity=0.322 Sum_probs=29.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|.++|.|| |.+|.++|..|.++|.+|.++.|.+
T Consensus 33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence 46788888 7999999999999999999998864
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.11 E-value=0.01 Score=38.39 Aligned_cols=32 Identities=25% Similarity=0.199 Sum_probs=28.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus 21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 45788888 799999999999999999988875
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=96.05 E-value=0.02 Score=35.40 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=45.2
Q ss_pred CEEEEecCCCchH-HHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIG-HATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG-~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++.+.|- +|+| .++|+.|.++|+.|...|+...... +.+.+.+..+. ..+-. +.. .+.
T Consensus 9 ~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~---~~L~~~Gi~v~--~g~~~-------------~~i-~~~ 68 (96)
T d1p3da1 9 QQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVT---QRLAQAGAKIY--IGHAE-------------EHI-EGA 68 (96)
T ss_dssp CEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHH---HHHHHTTCEEE--ESCCG-------------GGG-TTC
T ss_pred CEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhh---hHHHHCCCeEE--ECCcc-------------ccC-CCC
Confidence 46677776 4677 6679999999999999998754333 33344454433 22211 112 367
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|.+|.+.++.
T Consensus 69 d~vV~S~AI~ 78 (96)
T d1p3da1 69 SVVVVSSAIK 78 (96)
T ss_dssp SEEEECTTSC
T ss_pred CEEEECCCcC
Confidence 9999999974
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.00 E-value=0.029 Score=35.65 Aligned_cols=68 Identities=15% Similarity=0.235 Sum_probs=50.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
++.|.|| |.+|+-++....+.|++|++.+.+++.-.... .-.++..|..|.+.+.++... ..+|+
T Consensus 13 kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v--------a~~~i~~~~~d~~~l~~~~~~------~~~Dv 77 (111)
T d1kjqa2 13 RVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHV--------AHRSHVINMLDGDALRRVVEL------EKPHY 77 (111)
T ss_dssp EEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG--------SSEEEECCTTCHHHHHHHHHH------HCCSE
T ss_pred EEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc--------CCeEEECCCCCHHHHHHHHHh------hCCce
Confidence 5888986 79999999999999999999998865432211 124566899998887777665 25677
Q ss_pred EEE
Q 028868 82 LIN 84 (202)
Q Consensus 82 vi~ 84 (202)
+.+
T Consensus 78 iT~ 80 (111)
T d1kjqa2 78 IVP 80 (111)
T ss_dssp EEE
T ss_pred EEE
Confidence 755
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=95.99 E-value=0.014 Score=37.82 Aligned_cols=33 Identities=21% Similarity=0.182 Sum_probs=29.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|.++|.|| |-||..+|..|.+.|.+|.++.|.+
T Consensus 26 ~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~ 58 (123)
T d1dxla2 26 KKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS 58 (123)
T ss_dssp SEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence 56888888 7999999999999999999998754
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=95.99 E-value=0.015 Score=37.02 Aligned_cols=33 Identities=24% Similarity=0.287 Sum_probs=28.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.+|.++|..|.+.|.+|.++.+.+
T Consensus 22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence 56788887 7999999999999999999988754
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=95.87 E-value=0.0097 Score=41.82 Aligned_cols=76 Identities=14% Similarity=0.124 Sum_probs=57.2
Q ss_pred ecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEc
Q 028868 6 TGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINN 85 (202)
Q Consensus 6 tGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ 85 (202)
|-|+||...++.+.+ . +.+|+.++++++.++.+.+.+...+.++.++..+.++.+.+ ++... . .++|.++.-
T Consensus 31 t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~---~~~~~--~-~~vdgIl~D 102 (192)
T d1m6ya2 31 TVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFL---LKTLG--I-EKVDGILMD 102 (192)
T ss_dssp TCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHH---HHHTT--C-SCEEEEEEE
T ss_pred cCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHH---HHHcC--C-CCcceeeec
Confidence 556677777777765 2 46999999999999988888877777899999998874432 22211 1 579999999
Q ss_pred CCCC
Q 028868 86 AAIA 89 (202)
Q Consensus 86 ag~~ 89 (202)
-|++
T Consensus 103 lGvS 106 (192)
T d1m6ya2 103 LGVS 106 (192)
T ss_dssp CSCC
T ss_pred cchh
Confidence 9975
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=95.73 E-value=0.0065 Score=42.63 Aligned_cols=39 Identities=23% Similarity=0.145 Sum_probs=33.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
++.|.|| |..|.++|..|++.|++|.+.+|+++..+...
T Consensus 9 KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~ 47 (189)
T d1n1ea2 9 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN 47 (189)
T ss_dssp EEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred eEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence 5788988 68999999999999999999999987766544
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=95.69 E-value=0.011 Score=37.59 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=30.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
|+++|.|+ |.+|..-++.|++.|++|++.+....
T Consensus 13 k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~ 46 (113)
T d1pjqa1 13 RDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI 46 (113)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 68999999 58999999999999999998887653
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.64 E-value=0.015 Score=41.16 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=34.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
|+++|-| .|.+|.++|+.|.+.|++|++.+.+.+.+....
T Consensus 28 k~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~ 67 (201)
T d1c1da1 28 LTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV 67 (201)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence 6788887 589999999999999999999999887665543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.63 E-value=0.047 Score=39.46 Aligned_cols=32 Identities=25% Similarity=0.298 Sum_probs=28.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
++|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 31 ~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 31 SRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence 47999997 7999999999999998 88888764
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.60 E-value=0.077 Score=34.78 Aligned_cols=76 Identities=13% Similarity=0.161 Sum_probs=52.7
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CCEEE-EEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 2 TALVTGGTRGIGHATVEELARF-GAIVH-TCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~-g~~Vi-~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
++.|.|++|-+|+++++...+. +++++ .+++.. .+. .+...+.++ -.|+|.++...+.++.+.+. ++
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~----~~~~~~~Dv---vIDFS~p~~~~~~~~~~~~~---~~ 69 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLS----LLTDGNTEV---VIDFTHPDVVMGNLEFLIDN---GI 69 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTH----HHHTTTCSE---EEECCCTTTHHHHHHHHHHT---TC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chh----hhccccCCE---EEEcccHHHHHHHHHHHHhc---CC
Confidence 5789999999999999998775 55665 344432 111 122223344 46999999999888888765 46
Q ss_pred cEEEEcCCC
Q 028868 80 NILINNAAI 88 (202)
Q Consensus 80 d~vi~~ag~ 88 (202)
-+|+-..|+
T Consensus 70 ~~ViGTTG~ 78 (135)
T d1yl7a1 70 HAVVGTTGF 78 (135)
T ss_dssp EEEECCCCC
T ss_pred CEEEecccc
Confidence 678877774
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.54 E-value=0.014 Score=41.17 Aligned_cols=39 Identities=18% Similarity=0.111 Sum_probs=33.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
|++-|.|+ |-+|..+|..|+++|++|++.+.++++.+.+
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~l 39 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLI 39 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence 56778866 7999999999999999999999998766554
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.49 E-value=0.0057 Score=42.50 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=30.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
|++.|.|+ |..|.++|..|++.|++|.+.+|+.+
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~ 34 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD 34 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 67889998 79999999999999999999998543
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.45 E-value=0.0099 Score=42.71 Aligned_cols=32 Identities=34% Similarity=0.384 Sum_probs=29.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|+|+|+|| |-.|.+.|.+|.++|++|.++.|+
T Consensus 7 ~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 7 KRVVVLGS-GVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence 57999999 699999999999999999999985
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=95.29 E-value=0.029 Score=36.38 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=29.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|.++|.|| |-||.++|..|.+.|.+|.++.+.+
T Consensus 27 ~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 27 GKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp SEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence 56888988 7999999999999999999987753
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.12 E-value=0.065 Score=34.05 Aligned_cols=33 Identities=18% Similarity=0.087 Sum_probs=28.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|.++|.|| |-+|..+|..|.+.|.+|.++.|.+
T Consensus 23 ~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 23 STVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence 46788887 7999999999999999999988864
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.07 E-value=0.059 Score=35.12 Aligned_cols=33 Identities=18% Similarity=0.143 Sum_probs=29.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|.|| |.+|.++|..|.+.|.+|.++.+.+
T Consensus 36 k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~ 68 (133)
T d1q1ra2 36 NRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA 68 (133)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence 57888888 7999999999999999999988753
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.94 E-value=0.07 Score=39.75 Aligned_cols=25 Identities=20% Similarity=0.102 Sum_probs=21.8
Q ss_pred CCCchHHHHHHHHHHCCCEEEEEeC
Q 028868 8 GTRGIGHATVEELARFGAIVHTCSR 32 (202)
Q Consensus 8 as~giG~a~a~~l~~~g~~Vi~~~r 32 (202)
.||.+|.++|+.++.+|+.|+++.+
T Consensus 44 SSGk~G~alA~~~~~~Ga~V~li~g 68 (290)
T d1p9oa_ 44 SSGRRGATSAEAFLAAGYGVLFLYR 68 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CchHHHHHHHHHHHHcCCEEEEEec
Confidence 3578999999999999999998754
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=94.84 E-value=0.2 Score=32.79 Aligned_cols=82 Identities=9% Similarity=-0.007 Sum_probs=52.3
Q ss_pred CEEEEecCC---CchHHHHHHHHHHCCCEEEEEeCChhHHH--HHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGT---RGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas---~giG~a~a~~l~~~g~~Vi~~~r~~~~~~--~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++.|.||| +..|..+++.|.+.|++|+.+........ .....+.+.. .++..+. ...+.+.++++++.+
T Consensus 20 ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i~---vp~~~~~~~~~e~~~ 96 (139)
T d2d59a1 20 KKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDLF---VKPKLTMEYVEQAIK 96 (139)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEEC---SCHHHHHHHHHHHHH
T ss_pred CeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEEE---eCHHHHHHHHHHHHH
Confidence 689999999 67999999999999999988765532211 1111122211 2222222 336677777777766
Q ss_pred HhCCCccEEEEcCCC
Q 028868 74 IFQGKLNILINNAAI 88 (202)
Q Consensus 74 ~~~~~id~vi~~ag~ 88 (202)
. .+..++...|.
T Consensus 97 ~---g~k~v~~~~G~ 108 (139)
T d2d59a1 97 K---GAKVVWFQYNT 108 (139)
T ss_dssp H---TCSEEEECTTC
T ss_pred h---CCCEEEEeccc
Confidence 5 35678777775
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=94.80 E-value=0.031 Score=37.30 Aligned_cols=40 Identities=13% Similarity=0.031 Sum_probs=32.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
+++-|.|. |-+|.++|+.|.++|++|++.+++.++.....
T Consensus 1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~ 40 (152)
T d1i36a2 1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIER 40 (152)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence 45667766 89999999999999999999888765554443
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=94.61 E-value=0.019 Score=41.82 Aligned_cols=32 Identities=22% Similarity=0.147 Sum_probs=29.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|+|+|+|| |--|...|.+|+++|++|.++.++
T Consensus 2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~ 33 (373)
T d1seza1 2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE 33 (373)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence 78999998 688999999999999999999765
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.56 E-value=0.064 Score=38.41 Aligned_cols=72 Identities=17% Similarity=0.080 Sum_probs=54.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++|=.|++.| .++..|+++|++|++++.+++-++.+.+.....+.++.++..|+.+.. +.+..|
T Consensus 43 ~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~------------~~~~fD 107 (251)
T d1wzna1 43 RRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA------------FKNEFD 107 (251)
T ss_dssp CEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC------------CCSCEE
T ss_pred CEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc------------cccccc
Confidence 46788888766 446678899999999999998888888777776778899999986622 124689
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.|+..-+
T Consensus 108 ~I~~~~~ 114 (251)
T d1wzna1 108 AVTMFFS 114 (251)
T ss_dssp EEEECSS
T ss_pred hHhhhhh
Confidence 8887533
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.56 E-value=0.05 Score=36.93 Aligned_cols=36 Identities=28% Similarity=0.374 Sum_probs=31.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL 37 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~ 37 (202)
|+++|.|= |-+|+.+|+.+...|++|+++..++.+.
T Consensus 25 k~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~a 60 (163)
T d1li4a1 25 KVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINA 60 (163)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred CEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchh
Confidence 67888876 6999999999999999999999998553
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.50 E-value=0.016 Score=38.68 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=28.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|++||+|| |.+|..-++.|++.|++|.+++..
T Consensus 14 krvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 14 KRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 68999999 689999999999999999988753
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.50 E-value=0.024 Score=39.22 Aligned_cols=33 Identities=21% Similarity=0.109 Sum_probs=30.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|+|| |.-|.+.|..|+++|++|.+..+++
T Consensus 44 k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 44 KNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred cEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence 67999998 6999999999999999999998864
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.49 E-value=0.02 Score=39.49 Aligned_cols=33 Identities=15% Similarity=0.176 Sum_probs=28.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~ 34 (202)
|+|+|+|| |..|...|..|.++|+ .|.+..|..
T Consensus 5 ~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~ 38 (196)
T d1gtea4 5 AKIALLGA-GPASISCASFLARLGYSDITIFEKQE 38 (196)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred CEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence 67899998 7999999999999998 488887753
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=94.49 E-value=0.018 Score=41.94 Aligned_cols=31 Identities=29% Similarity=0.233 Sum_probs=28.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+|+|| |-.|.++|.+|+++|.+|+++.++.
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 788988 7999999999999999999998863
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.37 E-value=0.13 Score=36.48 Aligned_cols=41 Identities=10% Similarity=0.082 Sum_probs=33.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
++||..|++.| ..+..|+++|++|+.++-+++.++.+.++.
T Consensus 47 ~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~ 87 (229)
T d2bzga1 47 LRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ 87 (229)
T ss_dssp CEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred CEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence 36899998765 457889999999999999998887776654
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=94.31 E-value=0.71 Score=34.44 Aligned_cols=136 Identities=13% Similarity=0.070 Sum_probs=75.2
Q ss_pred CCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcC---CeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEE
Q 028868 8 GTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKG---FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI 83 (202)
Q Consensus 8 as~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~---~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi 83 (202)
++|+++.+ ++..|+ .|+.++.++..++.+.+.+...+ .++.++..|+-+ .++..... +.+.|+||
T Consensus 154 ~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~------~l~~~~~~-~~~fD~Ii 222 (317)
T d2b78a2 154 YTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFD------YFKYARRH-HLTYDIII 222 (317)
T ss_dssp TTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHH------HHHHHHHT-TCCEEEEE
T ss_pred CCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHH------HHHHHHhh-cCCCCEEE
Confidence 34555433 455777 79999999988887777665332 358888888532 34444443 35899999
Q ss_pred EcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHHHHH
Q 028868 84 NNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKN 163 (202)
Q Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~~~ 163 (202)
..+-.+...+-.-... ......+++.++++++. +|.+++ +|...... .+.|.+.
T Consensus 223 ~DPP~f~~~~~~~~~~----------~~~~~~L~~~a~~ll~p--gG~l~~-~scs~~~~-------------~~~f~~~ 276 (317)
T d2b78a2 223 IDPPSFARNKKEVFSV----------SKDYHKLIRQGLEILSE--NGLIIA-STNAANMT-------------VSQFKKQ 276 (317)
T ss_dssp ECCCCC-----CCCCH----------HHHHHHHHHHHHHTEEE--EEEEEE-EECCTTSC-------------HHHHHHH
T ss_pred EcChhhccchhHHHHH----------HHHHHHHHHHHHHHcCC--CCEEEE-EeCCccCC-------------HHHHHHH
Confidence 9876442211111111 12334466777777765 455554 44332211 1233334
Q ss_pred HHHHHccCCcEEEEeeC
Q 028868 164 LACEWAKDNIRTNTVAP 180 (202)
Q Consensus 164 la~e~~~~gi~v~~v~p 180 (202)
+...+...+..+..+..
T Consensus 277 v~~a~~~~~~~~~~~~~ 293 (317)
T d2b78a2 277 IEKGFGKQKHTYLDLQQ 293 (317)
T ss_dssp HHHHHTTCCCEEEEEEC
T ss_pred HHHHHHHcCCeEEEecc
Confidence 44444556777766653
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=94.25 E-value=0.73 Score=34.33 Aligned_cols=105 Identities=12% Similarity=0.087 Sum_probs=63.1
Q ss_pred CCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcC
Q 028868 8 GTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNA 86 (202)
Q Consensus 8 as~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~a 86 (202)
++|+++.+ ++..+.+|+.++.++..++.+.+.+...+. ++.++..|..+ +.+++... +.+.|.||..+
T Consensus 155 gtG~~s~~----~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~-~~~fD~Vi~Dp 223 (318)
T d1wxxa2 155 YAGGFALH----LALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKE-GERFDLVVLDP 223 (318)
T ss_dssp TTTHHHHH----HHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHT-TCCEEEEEECC
T ss_pred CCcHHHHH----HHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhh-hcCCCEEEEcC
Confidence 34555544 344566999999999998888877765553 58888888654 33333333 35799999988
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEe
Q 028868 87 AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFI 135 (202)
Q Consensus 87 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~v 135 (202)
..+.... .+.. .-......+++.+.++++. +|.+++.
T Consensus 224 P~~~~~~------~~~~----~~~~~~~~l~~~a~~lLkp--GG~Lv~~ 260 (318)
T d1wxxa2 224 PAFAKGK------KDVE----RAYRAYKEVNLRAIKLLKE--GGILATA 260 (318)
T ss_dssp CCSCCST------TSHH----HHHHHHHHHHHHHHHTEEE--EEEEEEE
T ss_pred Cccccch------HHHH----HHHHHHHHHHHHHHHHcCC--CCEEEEE
Confidence 6543221 1111 1112233466667777765 5666653
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.17 E-value=0.035 Score=43.77 Aligned_cols=31 Identities=29% Similarity=0.466 Sum_probs=27.6
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|||.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus 39 kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D 70 (426)
T d1yovb1 39 KVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD 70 (426)
T ss_dssp CEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred eEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence 5899999 6899999999999998 78888764
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=94.14 E-value=0.065 Score=36.56 Aligned_cols=57 Identities=12% Similarity=0.031 Sum_probs=43.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc-------------CCeEEEEEecCCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK-------------GFKVTGSVCDLSS 60 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~-------------~~~v~~~~~Dv~~ 60 (202)
++||..|++.| ..+..|+++|++|+.++-++..++.+.+..+.. +....++..|..+
T Consensus 22 ~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 91 (201)
T d1pjza_ 22 ARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA 91 (201)
T ss_dssp CEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS
T ss_pred CEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccc
Confidence 46889998666 367789999999999999998888887766432 2334677777766
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=94.09 E-value=0.042 Score=39.52 Aligned_cols=72 Identities=15% Similarity=0.101 Sum_probs=55.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|=.|++.|. ++..|+++|.+|+.++.+++-++.+.+.....+.++.++..|+.+.. +.++.|
T Consensus 39 ~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~------------~~~~fD 103 (246)
T d1y8ca_ 39 DDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN------------INRKFD 103 (246)
T ss_dssp TEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC------------CSCCEE
T ss_pred CeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc------------cccccc
Confidence 467888888774 77788999999999999998888877777666778889988876521 125789
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+|+..-+
T Consensus 104 ~i~~~~~ 110 (246)
T d1y8ca_ 104 LITCCLD 110 (246)
T ss_dssp EEEECTT
T ss_pred ccceeee
Confidence 9886544
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.96 E-value=0.15 Score=35.58 Aligned_cols=73 Identities=16% Similarity=0.013 Sum_probs=54.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+||=.|++.|. ++..|++.|++|+.++.+++.++.+.+.....+..+..+..|..+.. +. ....|+
T Consensus 40 ~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~-----~~------~~~fD~ 105 (226)
T d1ve3a1 40 KVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLS-----FE------DKTFDY 105 (226)
T ss_dssp EEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCC-----SC------TTCEEE
T ss_pred EEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhcccccccccccccccccc-----cc------CcCceE
Confidence 57888988775 66788899999999999998888887777666667778888877621 00 146899
Q ss_pred EEEcCCC
Q 028868 82 LINNAAI 88 (202)
Q Consensus 82 vi~~ag~ 88 (202)
|+.....
T Consensus 106 I~~~~~l 112 (226)
T d1ve3a1 106 VIFIDSI 112 (226)
T ss_dssp EEEESCG
T ss_pred EEEecch
Confidence 8886543
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=93.90 E-value=0.19 Score=33.36 Aligned_cols=82 Identities=11% Similarity=0.055 Sum_probs=53.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHHHHHhC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTSIFQ 76 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~ 76 (202)
+-+.|. |-+|.++|++|++.|+.| +..|+.++..+..++.... -.+...+...+.+.+.+....+.+.+..
T Consensus 3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~- 79 (156)
T d2cvza2 3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL- 79 (156)
T ss_dssp EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC-
T ss_pred EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc-
Confidence 556777 899999999999988755 5778877776666654211 1123444456667777777777766554
Q ss_pred CCccEEEEcCC
Q 028868 77 GKLNILINNAA 87 (202)
Q Consensus 77 ~~id~vi~~ag 87 (202)
.+-..+|.+.-
T Consensus 80 ~~~~~iid~sT 90 (156)
T d2cvza2 80 REGTYWVDATS 90 (156)
T ss_dssp CTTEEEEECSC
T ss_pred ccccccccccc
Confidence 34455555544
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=93.87 E-value=0.036 Score=39.85 Aligned_cols=33 Identities=24% Similarity=0.191 Sum_probs=29.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
++|+|+|| |--|..+|..|+++|++|+++.|++
T Consensus 5 ~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 5 DRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 47899999 6999999999999999999998854
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=93.84 E-value=0.061 Score=36.60 Aligned_cols=40 Identities=23% Similarity=0.277 Sum_probs=33.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
|+++|.|-|.-+|+.++..|.++|++|..+.+....+...
T Consensus 38 K~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~ 77 (166)
T d1b0aa1 38 LNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH 77 (166)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH
T ss_pred ceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH
Confidence 6899999999999999999999999998887765444433
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.81 E-value=0.031 Score=41.30 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=29.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+|+|+|| |--|...|.+|.++|++|+++.+++
T Consensus 31 kkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 31 KHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp CEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 67999998 6889999999999999999998764
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.80 E-value=0.11 Score=34.54 Aligned_cols=33 Identities=21% Similarity=0.163 Sum_probs=27.3
Q ss_pred EEEEe-cCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 2 TALVT-GGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 2 ~~lIt-Gas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
.++|. .+++.||.++|..|+++|.+|.++.+.+
T Consensus 41 ~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~ 74 (156)
T d1djqa2 41 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 74 (156)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence 34554 3558999999999999999999998865
|
| >d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein PH1948 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.75 E-value=0.23 Score=34.55 Aligned_cols=72 Identities=18% Similarity=0.188 Sum_probs=52.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|++|=.|+++|. ++..++.+|+ +|++++.+++.++.+.+.+...+.+..++..|+.+ +.+++
T Consensus 48 ~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~--------------~~~~f 110 (201)
T d1wy7a1 48 KVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE--------------FNSRV 110 (201)
T ss_dssp CEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG--------------CCCCC
T ss_pred CEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhh--------------hCCcC
Confidence 355656666552 3334567786 89999999988888887777767788888888643 23689
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|+||.|+-..
T Consensus 111 D~Vi~nPP~~ 120 (201)
T d1wy7a1 111 DIVIMNPPFG 120 (201)
T ss_dssp SEEEECCCCS
T ss_pred cEEEEcCccc
Confidence 9999998764
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.54 E-value=0.6 Score=34.90 Aligned_cols=104 Identities=17% Similarity=0.166 Sum_probs=63.5
Q ss_pred CchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcC
Q 028868 10 RGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNA 86 (202)
Q Consensus 10 ~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~a 86 (202)
|+++.+ ++..|+ +|+.++.++..++.+.+.+...+ .++.++..|+-+ .+..+... +.+.|.||..+
T Consensus 157 G~~si~----~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~-~~~fD~Vi~Dp 225 (324)
T d2as0a2 157 GGFAIH----AAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK-GEKFDIVVLDP 225 (324)
T ss_dssp THHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT-TCCEEEEEECC
T ss_pred cchhhh----hhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc-cCCCCchhcCC
Confidence 444444 445676 89999999998888877765443 357777777542 33333333 36899999987
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHhHhHHHHHHHHhHHHhcCCCCeEEEec
Q 028868 87 AIAFVKPTVDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFIS 136 (202)
Q Consensus 87 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vs 136 (202)
-..... ....... ......+++.++++++. +|.+++.+
T Consensus 226 P~~~~~------~~~~~~~----~~~y~~l~~~a~~ll~p--GG~lv~~s 263 (324)
T d2as0a2 226 PAFVQH------EKDLKAG----LRAYFNVNFAGLNLVKD--GGILVTCS 263 (324)
T ss_dssp CCSCSS------GGGHHHH----HHHHHHHHHHHHTTEEE--EEEEEEEE
T ss_pred ccccCC------HHHHHHH----HHHHHHHHHHHHHHcCC--CcEEEEEe
Confidence 754321 1222221 22344567777777765 56776654
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=93.45 E-value=0.21 Score=31.40 Aligned_cols=33 Identities=24% Similarity=0.285 Sum_probs=26.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHC---CCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARF---GAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~---g~~Vi~~~r~~ 34 (202)
|+++|.|| |.+|.++|..|.+. |.+|.++.|.+
T Consensus 19 ~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 19 KRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp SEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence 57889998 69999999876654 78898887753
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.43 E-value=0.11 Score=37.25 Aligned_cols=43 Identities=21% Similarity=0.214 Sum_probs=35.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~ 44 (202)
|+++|-|- |.+|.++|+.|.+.|++|+.++.+...+.....+.
T Consensus 40 ~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~ 82 (230)
T d1leha1 40 LAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE 82 (230)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhc
Confidence 46666665 79999999999999999999999888777766554
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=93.41 E-value=0.038 Score=40.31 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=27.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
++|+|| |-.|.++|.+|+++|.+|+++.+.
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~ 35 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAF 35 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence 788888 689999999999999999999874
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=93.32 E-value=0.048 Score=35.39 Aligned_cols=75 Identities=15% Similarity=0.074 Sum_probs=53.0
Q ss_pred CEEEEecCCC----------chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 028868 1 MTALVTGGTR----------GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 1 k~~lItGas~----------giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
|++||.|+.. --+.+.++.|-++|++++++..+++....-. ....++++.+++ .+++.+++++
T Consensus 8 kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYfePlt---~e~v~~Ii~~ 80 (127)
T d1a9xa3 8 KSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYIEPIH---WEVVRKIIEK 80 (127)
T ss_dssp CEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEECSCCC---HHHHHHHHHH
T ss_pred CEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeeeecCC---HHHHHHHHHH
Confidence 6799999853 4567889999999999999999986543221 224456655554 5566666665
Q ss_pred HHHHhCCCccEEEEcCCC
Q 028868 71 VTSIFQGKLNILINNAAI 88 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~ 88 (202)
.++|.++...|.
T Consensus 81 ------E~pd~il~~~GG 92 (127)
T d1a9xa3 81 ------ERPDAVLPTMGG 92 (127)
T ss_dssp ------HCCSEEECSSSH
T ss_pred ------hCcCCeEEEeee
Confidence 478999887774
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=93.29 E-value=0.04 Score=40.70 Aligned_cols=31 Identities=16% Similarity=0.257 Sum_probs=27.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
.|+|+|| |-+|.++|.+|+++|+ +|++++|+
T Consensus 3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~ 34 (305)
T d1pj5a2 3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQG 34 (305)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 3788888 6999999999999997 59999875
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.26 E-value=0.19 Score=31.70 Aligned_cols=33 Identities=21% Similarity=0.295 Sum_probs=25.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHC---CCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARF---GAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~---g~~Vi~~~r~~ 34 (202)
|+++|.|| |.+|..+|..|.+. |.+|.++.|.+
T Consensus 21 ~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 21 RRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp SEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred CeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 56888888 79999999766654 45788887743
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.25 E-value=0.063 Score=36.70 Aligned_cols=39 Identities=28% Similarity=0.373 Sum_probs=33.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDA 39 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~ 39 (202)
|+++|.|.|.-+|+.++..|.++|++|..+.+....+..
T Consensus 40 k~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~ 78 (170)
T d1a4ia1 40 RHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE 78 (170)
T ss_dssp CEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred ceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence 689999999999999999999999999998876655543
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.25 E-value=0.056 Score=38.57 Aligned_cols=33 Identities=21% Similarity=0.284 Sum_probs=29.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|+|| |.-|...|.+|.++|++|.+..++.
T Consensus 50 k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~ 82 (233)
T d1djqa3 50 DSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE 82 (233)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence 67899999 6899999999999999999988753
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=93.19 E-value=0.31 Score=35.26 Aligned_cols=70 Identities=17% Similarity=0.228 Sum_probs=50.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+++|=.|+++|+ ++..+++.|++|+.++.++..++.+.+.....+.++.++..|+.+ .+. . ++.|
T Consensus 122 ~~VLDiGcGsG~---l~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~~-----~-~~fD 186 (254)
T d2nxca1 122 DKVLDLGTGSGV---LAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------ALP-----F-GPFD 186 (254)
T ss_dssp CEEEEETCTTSH---HHHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HGG-----G-CCEE
T ss_pred CEEEEcccchhH---HHHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------ccc-----c-cccc
Confidence 457778888876 334577889999999999999988887776666667777766321 111 1 5789
Q ss_pred EEEEc
Q 028868 81 ILINN 85 (202)
Q Consensus 81 ~vi~~ 85 (202)
+++.|
T Consensus 187 ~V~an 191 (254)
T d2nxca1 187 LLVAN 191 (254)
T ss_dssp EEEEE
T ss_pred hhhhc
Confidence 99876
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=93.16 E-value=0.14 Score=30.94 Aligned_cols=69 Identities=17% Similarity=0.139 Sum_probs=46.5
Q ss_pred CEEEEecCCCchHH-HHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGH-ATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~-a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
+++-++|- +|+|- ++|+.|.++|+.|...|+.+... .+.|++.|..+.. .-|..+ . ...
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~---t~~L~~~Gi~i~~-gh~~~~--------------i-~~~ 61 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETER---TAYLRKLGIPIFV-PHSADN--------------W-YDP 61 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHH---HHHHHHTTCCEES-SCCTTS--------------C-CCC
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChh---HHHHHHCCCeEEe-eecccc--------------c-CCC
Confidence 35566665 57776 78999999999999999886433 3345555654432 233322 1 358
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|.||.++++.
T Consensus 62 d~vV~SsAI~ 71 (89)
T d1j6ua1 62 DLVIKTPAVR 71 (89)
T ss_dssp SEEEECTTCC
T ss_pred CEEEEecCcC
Confidence 9999999974
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=93.05 E-value=0.058 Score=40.51 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=29.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+++|+|| |--|..+|.+|+++|++|.++.++.
T Consensus 3 KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 3 KKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence 68999998 6889999999999999999987754
|
| >d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: CheY-like family: CheY-related domain: CheY protein species: Thermotoga maritima [TaxId: 2336]
Probab=92.86 E-value=0.62 Score=29.16 Aligned_cols=82 Identities=12% Similarity=0.090 Sum_probs=54.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
|++||.--...+-..+...|-+.|++|+..+.+.+.. .+.+.+...++.++-.++.+.+-+ +++.++++.. +.+-
T Consensus 2 krILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~a---l~~~~~~~~dliilD~~mp~~~G~-e~~~~ir~~~-~~~p 76 (118)
T d1u0sy_ 2 KRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREA---VEKYKELKPDIVTMDITMPEMNGI-DAIKEIMKID-PNAK 76 (118)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHH---HHHHHHHCCSEEEEECSCGGGCHH-HHHHHHHHHC-TTCC
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHH---HHHHHhccCCEEEEecCCCCCCHH-HHHHHHHHhC-CCCc
Confidence 6788888888888889999989999998777665333 333334445566655555554433 4566666664 5677
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+++.++-
T Consensus 77 vi~ls~~ 83 (118)
T d1u0sy_ 77 IIVCSAM 83 (118)
T ss_dssp EEEEECT
T ss_pred EEEEEcc
Confidence 7776543
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=92.63 E-value=0.75 Score=31.41 Aligned_cols=92 Identities=15% Similarity=0.064 Sum_probs=55.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh----------HHHHHHHHHHhcCCeEEEEEecCCCHHHH---HHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI----------ELDARLHEWKNKGFKVTGSVCDLSSREQR---EKL 67 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~----------~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i---~~~ 67 (202)
|++.|.|. |.||+.+|+.+...|++|+..++... .++++.+ ..++..+.+.+++.+.- ++.
T Consensus 45 ~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~~~l~ell~-----~sDii~i~~plt~~T~~li~~~~ 118 (188)
T d1sc6a1 45 KKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLN-----MSDVVSLHVPENPSTKNMMGAKE 118 (188)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTTCEECSCHHHHHH-----HCSEEEECCCSSTTTTTCBCHHH
T ss_pred eEEEEeec-ccchhhhhhhcccccceEeeccccccchhhhhhhhhhHHHHHh-----hccceeecccCCcchhhhccHHH
Confidence 46777766 79999999999999999999987532 1222222 13677777777764321 334
Q ss_pred HHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHH
Q 028868 68 IETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTN 109 (202)
Q Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n 109 (202)
++.+ +-+.++-|.+-.. + .+.+++.+.++.+
T Consensus 119 l~~m------k~~a~lIN~aRG~---l--vde~aL~~aL~~~ 149 (188)
T d1sc6a1 119 ISLM------KPGSLLINASRGT---V--VDIPALADALASK 149 (188)
T ss_dssp HHHS------CTTEEEEECSCSS---S--BCHHHHHHHHHTT
T ss_pred HhhC------CCCCEEEEcCcHH---h--hhhHHHHHHHHcC
Confidence 4442 3344444444322 2 3555555555443
|
| >d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Dethiobiotin synthetase species: Escherichia coli [TaxId: 562]
Probab=92.49 E-value=0.042 Score=38.37 Aligned_cols=32 Identities=19% Similarity=0.187 Sum_probs=27.7
Q ss_pred CEEEEecCCCchHH-----HHHHHHHHCCCEEEEEeC
Q 028868 1 MTALVTGGTRGIGH-----ATVEELARFGAIVHTCSR 32 (202)
Q Consensus 1 k~~lItGas~giG~-----a~a~~l~~~g~~Vi~~~r 32 (202)
|+++|||.+.|.|+ .+|+.|+++|++|.+++-
T Consensus 2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~ 38 (224)
T d1byia_ 2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP 38 (224)
T ss_dssp EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence 68999999989887 578899999999999863
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=92.35 E-value=0.08 Score=37.08 Aligned_cols=33 Identities=27% Similarity=0.314 Sum_probs=29.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|++.|.|. |.||+.+|+.+...|++|+..++..
T Consensus 46 ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~ 78 (199)
T d1dxya1 46 QTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP 78 (199)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eeeeeeec-ccccccccccccccceeeeccCCcc
Confidence 57888887 7999999999999999999998854
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.33 E-value=0.75 Score=28.86 Aligned_cols=82 Identities=12% Similarity=0.082 Sum_probs=48.5
Q ss_pred CEEEEecCC---CchHHHHHHHHHHCCCEEEEEeCChhHHH--HHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGT---RGIGHATVEELARFGAIVHTCSRNQIELD--ARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas---~giG~a~a~~l~~~g~~Vi~~~r~~~~~~--~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|++.|.|+| +..|..+.+.|.+.|++|+.+..+.+... ...+.+.+.. .++..+. ...+.+.++++++.+
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi~---vp~~~~~~~l~~~~~ 78 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVFV---VPPKVGLQVAKEAVE 78 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEEC---SCHHHHHHHHHHHHH
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEEE---eCHHHHHHHHHHHHh
Confidence 789999999 56899999999999999887754432211 1111111111 2222222 235556666666654
Q ss_pred HhCCCccEEEEcCCC
Q 028868 74 IFQGKLNILINNAAI 88 (202)
Q Consensus 74 ~~~~~id~vi~~ag~ 88 (202)
. .+..++...|.
T Consensus 79 ~---g~k~v~~~~g~ 90 (116)
T d1y81a1 79 A---GFKKLWFQPGA 90 (116)
T ss_dssp T---TCCEEEECTTS
T ss_pred c---CCceEEeccch
Confidence 3 35666666653
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.24 E-value=0.073 Score=37.21 Aligned_cols=31 Identities=16% Similarity=0.037 Sum_probs=27.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|+|+|| |--|...|.+|+++|.+|.++.+++
T Consensus 8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 688886 7899999999999999999998864
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=92.23 E-value=0.99 Score=30.00 Aligned_cols=40 Identities=13% Similarity=-0.058 Sum_probs=26.7
Q ss_pred CEEEEecCCCchHHHHHHHHH-H-C----CCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELA-R-F----GAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~-~-~----g~~Vi~~~r~~~~~~~~~ 41 (202)
+++.|.||++ +|...+-..+ . . ..++++.|.++++++...
T Consensus 1 mKIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~ 46 (162)
T d1up7a1 1 MRIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV 46 (162)
T ss_dssp CEEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH
T ss_pred CEEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHH
Confidence 5688999854 6665553322 2 1 348999999998876443
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=92.20 E-value=0.39 Score=33.84 Aligned_cols=75 Identities=19% Similarity=0.147 Sum_probs=57.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+||.+|+.+|--.++.-+++ |.+|+.+.++++..+.+.+.+.+.+ .++.++..|..+. .. . .++.|
T Consensus 81 ~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g---------~~-~-~~pfD 147 (215)
T d1jg1a_ 81 NILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG---------FP-P-KAPYD 147 (215)
T ss_dssp CEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---------CG-G-GCCEE
T ss_pred eEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC---------Cc-c-cCcce
Confidence 58899999998888877776 4579999999888887877777665 5789999997641 11 1 16899
Q ss_pred EEEEcCCCC
Q 028868 81 ILINNAAIA 89 (202)
Q Consensus 81 ~vi~~ag~~ 89 (202)
.++.+++..
T Consensus 148 ~Iiv~~a~~ 156 (215)
T d1jg1a_ 148 VIIVTAGAP 156 (215)
T ss_dssp EEEECSBBS
T ss_pred eEEeecccc
Confidence 999988764
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=92.20 E-value=0.11 Score=35.67 Aligned_cols=33 Identities=33% Similarity=0.291 Sum_probs=30.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|++.|.|. |.||+.+++.+...|++|+..+|++
T Consensus 43 k~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~ 75 (181)
T d1qp8a1 43 EKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTP 75 (181)
T ss_dssp CEEEEESC-STHHHHHHHHHHHTTCEEEEECSSC
T ss_pred ceEEEecc-ccccccceeeeeccccccccccccc
Confidence 67899998 5799999999999999999999875
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=92.14 E-value=0.13 Score=35.91 Aligned_cols=34 Identities=26% Similarity=0.238 Sum_probs=30.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
|++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus 44 k~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~ 77 (197)
T d1j4aa1 44 QVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN 77 (197)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence 67889987 79999999999999999999987643
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=91.95 E-value=0.51 Score=30.58 Aligned_cols=32 Identities=22% Similarity=0.098 Sum_probs=27.9
Q ss_pred CEEEEecCC---CchHHHHHHHHHHCCCEEEEEeC
Q 028868 1 MTALVTGGT---RGIGHATVEELARFGAIVHTCSR 32 (202)
Q Consensus 1 k~~lItGas---~giG~a~a~~l~~~g~~Vi~~~r 32 (202)
|++.|.||| +..|..+.+.|.+.|+++..+--
T Consensus 14 ksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~ 48 (136)
T d1iuka_ 14 KTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP 48 (136)
T ss_dssp CEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred CeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEe
Confidence 689999999 56999999999999998877654
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=91.75 E-value=0.067 Score=38.61 Aligned_cols=32 Identities=25% Similarity=0.216 Sum_probs=28.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
++|+|+|| |--|...|.+|.++|++|.++.++
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~ 32 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESS 32 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence 46899998 789999999999999999998764
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=91.63 E-value=0.23 Score=33.06 Aligned_cols=52 Identities=25% Similarity=0.226 Sum_probs=33.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHC--CCEEEEEeCChhHHHHHHHHHHhcCCeEEE
Q 028868 1 MTALVTGGTRGIGHATVEELARF--GAIVHTCSRNQIELDARLHEWKNKGFKVTG 53 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~--g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~ 53 (202)
|++.|.|+||.||.....-+-++ .++|++++-.. ..+.+.+...+......+
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~ 56 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAV 56 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhccccce
Confidence 68999999999999999988776 46777543221 233334444444444443
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.60 E-value=0.12 Score=34.51 Aligned_cols=33 Identities=18% Similarity=0.157 Sum_probs=28.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC--EEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA--IVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~--~Vi~~~r~~ 34 (202)
|+++|.|| |..|..+|..|.+++. +|.++.+++
T Consensus 3 krivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 3 RKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 78999999 6999999999999885 788887664
|
| >d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=91.59 E-value=1.4 Score=30.26 Aligned_cols=129 Identities=16% Similarity=0.104 Sum_probs=70.1
Q ss_pred HHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCCCCCCCCCCCCCHHHHHHHHHHHhHhHHHHH
Q 028868 38 DARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIAFVKPTVDITAEDMSTVSSTNFESVFHLS 117 (202)
Q Consensus 38 ~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 117 (202)
....+.+...+..+..+..|-... ...+...+ ... +.++.|||-.+....... ..+ .. ...+...+.++
T Consensus 41 ~~l~~~l~~~g~~~~~~~~~~~~~--~~~l~~~~-~~~-~~~~~vv~l~~~~~~~~~-~~~--~~----~~~~~~~l~l~ 109 (209)
T d2fr1a2 41 TAAREALESAGARVRELVVDARCG--RDELAERL-RSV-GEVAGVLSLLAVDEAEPE-EAP--LA----LASLADTLSLV 109 (209)
T ss_dssp HHHHHHHHTTSCEEEEEECCTTCC--HHHHHHHH-TTS-CCCSEEEECTTTTCCCCS-SCG--GG----CHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEEecCCCccC--HHHHHHHh-hcc-CCCCeEEEeCCCCCCCCc-chh--HH----HHHHHHHHHHH
Confidence 334445555565666555554321 22223222 222 578999987765422111 111 11 12245555666
Q ss_pred HHHhHHHhcCCCCeEEEecCCCCccCCCCChhhhhhHHHHHHHHHHHHHHHccCCcEEEEeeCC
Q 028868 118 QLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPW 181 (202)
Q Consensus 118 ~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~y~asK~a~~~~~~~la~e~~~~gi~v~~v~pG 181 (202)
|.+.. .....++.+++..+.. ..++...-...++++.+|.|+++.|++...+++..+.+.
T Consensus 110 qal~~---~~~~~~l~~vT~~a~~-~~~~d~~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~~~ 169 (209)
T d2fr1a2 110 QAMVS---AELGCPLWTVTESAVA-TGPFERVRNAAHGALWGVGRVIALENPAVWGGLVDVPAG 169 (209)
T ss_dssp HHHHH---TTCCCCEEEEEESCSC-SSTTSCCSCGGGHHHHHHHHHHHHHCGGGEEEEEEECTT
T ss_pred HHHHh---CCCCCcEEEEEcCCcc-cCCCcccCCHhHHhHHHHHHHHHHhCCCceEEEEECCCC
Confidence 66532 2234566666654322 222233345678999999999999998766777777554
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=91.52 E-value=0.11 Score=36.15 Aligned_cols=34 Identities=21% Similarity=0.086 Sum_probs=30.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
|++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus 50 ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 83 (193)
T d1mx3a1 50 ETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS 83 (193)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred ceEEEecc-ccccccceeeeeccccceeeccCccc
Confidence 67888887 79999999999999999999998643
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=91.44 E-value=0.44 Score=33.06 Aligned_cols=68 Identities=21% Similarity=0.197 Sum_probs=47.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKL 79 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~i 79 (202)
|+||=.|+++|+ ++..++..|+ +|+.++.+++.++.+.+.+ .++.++..|+.+ +.++.
T Consensus 50 k~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~----~~~~~~~~D~~~--------------l~~~f 108 (197)
T d1ne2a_ 50 RSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC----GGVNFMVADVSE--------------ISGKY 108 (197)
T ss_dssp SEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC----TTSEEEECCGGG--------------CCCCE
T ss_pred CEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc----ccccEEEEehhh--------------cCCcc
Confidence 567778887773 3445677886 7999999987776555432 347788888753 23689
Q ss_pred cEEEEcCCCC
Q 028868 80 NILINNAAIA 89 (202)
Q Consensus 80 d~vi~~ag~~ 89 (202)
|.||.|+-+.
T Consensus 109 D~Vi~NPPfg 118 (197)
T d1ne2a_ 109 DTWIMNPPFG 118 (197)
T ss_dssp EEEEECCCC-
T ss_pred eEEEeCcccc
Confidence 9999998753
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.32 E-value=0.21 Score=34.37 Aligned_cols=35 Identities=29% Similarity=0.278 Sum_probs=29.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE 36 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~ 36 (202)
|++.|.|. |.||+++++.+...|++|+..++....
T Consensus 45 k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~ 79 (184)
T d1ygya1 45 KTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSP 79 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCH
T ss_pred eeeeeccc-cchhHHHHHHhhhccceEEeecCCCCh
Confidence 56777775 899999999999999999999987543
|
| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=91.17 E-value=0.42 Score=32.73 Aligned_cols=76 Identities=7% Similarity=0.010 Sum_probs=50.9
Q ss_pred EecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEE
Q 028868 5 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILIN 84 (202)
Q Consensus 5 ItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~ 84 (202)
+.-||-|-|-+. +.+++++.+|++++|+++.++.+... ...++.++..+.++.+. .+.... . +++|.++.
T Consensus 22 ~vD~T~G~GGhs-~~iL~~~~~viaiD~D~~ai~~a~~~---~~~~~~~~~~~f~~~~~---~l~~~~--~-~~vdgIl~ 91 (182)
T d1wg8a2 22 YVDATLGGAGHA-RGILERGGRVIGLDQDPEAVARAKGL---HLPGLTVVQGNFRHLKR---HLAALG--V-ERVDGILA 91 (182)
T ss_dssp EEETTCTTSHHH-HHHHHTTCEEEEEESCHHHHHHHHHT---CCTTEEEEESCGGGHHH---HHHHTT--C-SCEEEEEE
T ss_pred EEEeCCCCcHHH-HHHhcccCcEEEEhhhhhHHHHHhhc---cccceeEeehHHHHHHH---HHHHcC--C-CccCEEEE
Confidence 445666666664 55566677999999999887655432 24468888888776333 333321 2 57999999
Q ss_pred cCCCCC
Q 028868 85 NAAIAF 90 (202)
Q Consensus 85 ~ag~~~ 90 (202)
--|++.
T Consensus 92 DLGvSs 97 (182)
T d1wg8a2 92 DLGVSS 97 (182)
T ss_dssp ECSCCH
T ss_pred EccCCH
Confidence 999763
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=91.13 E-value=0.66 Score=30.71 Aligned_cols=44 Identities=18% Similarity=0.185 Sum_probs=31.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEe--CChhHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCS--RNQIELDARLHEW 44 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~--r~~~~~~~~~~~~ 44 (202)
|++.|.|+||.||.....-+.++. ++|+.+. ++-+.+.+...++
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f 49 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEF 49 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHH
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHH
Confidence 579999999999999999888764 5776543 4444455544444
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=91.12 E-value=0.15 Score=32.65 Aligned_cols=75 Identities=12% Similarity=-0.026 Sum_probs=50.8
Q ss_pred CEEEEecCCC----------chHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Q 028868 1 MTALVTGGTR----------GIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 1 k~~lItGas~----------giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
|++||.|+.. --+.+.++.|-+.|++++++..|++....-. ....++++.++. .+.+.+++++
T Consensus 5 kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~----d~aD~lYfeplt---~e~v~~Ii~~ 77 (121)
T d1a9xa4 5 EKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY----DTSDRLYFEPVT---LEDVLEIVRI 77 (121)
T ss_dssp CEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST----TSSSEEECCCCS---HHHHHHHHHH
T ss_pred CEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh----hhcCceEEccCC---HHHHHHHHHH
Confidence 6789999853 4567889999999999999999886543211 123455554443 4555555554
Q ss_pred HHHHhCCCccEEEEcCCC
Q 028868 71 VTSIFQGKLNILINNAAI 88 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~ 88 (202)
.++|.++..-|.
T Consensus 78 ------E~p~~ii~~~GG 89 (121)
T d1a9xa4 78 ------EKPKGVIVQYGG 89 (121)
T ss_dssp ------HCCSEEECSSST
T ss_pred ------hCCCEEEeehhh
Confidence 467888887764
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=91.03 E-value=0.28 Score=33.73 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=28.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|++.|.|. |.||+++++.+...|++|+..++..
T Consensus 45 ~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~ 77 (188)
T d2naca1 45 MHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR 77 (188)
T ss_dssp CEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred cceeeccc-cccchhhhhhhhccCceEEEEeecc
Confidence 46778876 7999999999999999999999854
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=90.93 E-value=0.8 Score=31.21 Aligned_cols=71 Identities=18% Similarity=0.254 Sum_probs=50.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
++|=.|++ .|. .+..|+++|++|+.++-+++.++.+.+.....+. ++.+...|+.+.. +.+..|
T Consensus 33 rvLDiGcG--~G~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~------------~~~~fD 97 (198)
T d2i6ga1 33 RTLDLGCG--NGR-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT------------FDGEYD 97 (198)
T ss_dssp EEEEETCT--TSH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC------------CCCCEE
T ss_pred cEEEECCC--CCH-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc------------cccccc
Confidence 46777875 444 5678889999999999999888877766665543 4677777877522 124689
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+|+.+.-
T Consensus 98 ~I~~~~~ 104 (198)
T d2i6ga1 98 FILSTVV 104 (198)
T ss_dssp EEEEESC
T ss_pred EEEEeee
Confidence 8886554
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=90.92 E-value=2.2 Score=31.52 Aligned_cols=64 Identities=11% Similarity=0.000 Sum_probs=44.1
Q ss_pred HHHHCCCEEEEEeCChhHHHHHHHHHHh--c-CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCCCC
Q 028868 19 ELARFGAIVHTCSRNQIELDARLHEWKN--K-GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAAIA 89 (202)
Q Consensus 19 ~l~~~g~~Vi~~~r~~~~~~~~~~~~~~--~-~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag~~ 89 (202)
.++..|++|+.++.+...++.+.+.+.. . ..++.++..|+.+ .++..... +.+.|+||..+-.+
T Consensus 149 ~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~~------~l~~~~~~-~~~fD~IilDPP~f 215 (309)
T d2igta1 149 VAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMK------FIQREERR-GSTYDIILTDPPKF 215 (309)
T ss_dssp HHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHH------HHHHHHHH-TCCBSEEEECCCSE
T ss_pred HHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHHH------hHHHHhhc-CCCCCEEEECCCcc
Confidence 3556899999999999888877765542 2 2357888887543 34444333 36799999987644
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=90.79 E-value=0.11 Score=30.58 Aligned_cols=35 Identities=14% Similarity=0.130 Sum_probs=30.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIE 36 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~ 36 (202)
|++.|.|+ |.+|+-++..-.+.|.+|++.+.+++.
T Consensus 2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 68899998 799999999999999999999987544
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=90.75 E-value=1.5 Score=29.30 Aligned_cols=74 Identities=9% Similarity=0.070 Sum_probs=41.5
Q ss_pred EEEEecCCCchHHH-HHHHHHHC-----CCEEEEEeCChhHHHHHHHHHHh----cCCeEEEEEecCCCHHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHA-TVEELARF-----GAIVHTCSRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIETV 71 (202)
Q Consensus 2 ~~lItGas~giG~a-~a~~l~~~-----g~~Vi~~~r~~~~~~~~~~~~~~----~~~~v~~~~~Dv~~~~~i~~~~~~~ 71 (202)
++.|.||++ .|.+ +...++.+ +.++++.+.++++++.....+.. .+.+....... |. .+.+
T Consensus 5 KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~------~eal 75 (167)
T d1u8xx1 5 SIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--DP------EEAF 75 (167)
T ss_dssp EEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--CH------HHHH
T ss_pred eEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--Ch------hhcc
Confidence 467788865 3433 33444432 23899999999988754444432 13333322221 11 1111
Q ss_pred HHHhCCCccEEEEcCCCC
Q 028868 72 TSIFQGKLNILINNAAIA 89 (202)
Q Consensus 72 ~~~~~~~id~vi~~ag~~ 89 (202)
..-|+||+++|..
T Consensus 76 -----~~AD~Vvitag~~ 88 (167)
T d1u8xx1 76 -----TDVDFVMAHIRVG 88 (167)
T ss_dssp -----SSCSEEEECCCTT
T ss_pred -----CCCCEEEECCCcC
Confidence 3679999999974
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=90.74 E-value=0.12 Score=36.75 Aligned_cols=32 Identities=25% Similarity=0.215 Sum_probs=28.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
++|+|| |--|...|..|+++|.+|+++.++..
T Consensus 5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 688888 68999999999999999999998754
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=90.68 E-value=0.2 Score=34.53 Aligned_cols=39 Identities=18% Similarity=0.074 Sum_probs=31.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARL 41 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~ 41 (202)
|++.|.| .|-+|+.+|..| ++|++|++.|-++++.+.+.
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~ 39 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN 39 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence 5677887 589999999766 57999999999987665543
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.57 E-value=0.66 Score=29.86 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=25.6
Q ss_pred CEEEEecCCCchHHHHHHHHHH----CCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELAR----FGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~----~g~~Vi~~~r~ 33 (202)
|+++|.|| |.+|..+|..|++ .|.+|.++.+.
T Consensus 38 k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~ 73 (137)
T d1m6ia2 38 KSITIIGG-GFLGSELACALGRKARALGTEVIQLFPE 73 (137)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSS
T ss_pred CEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccc
Confidence 56888887 7999999988863 58899887764
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.26 E-value=0.21 Score=33.95 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=29.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|+++|.|-|.=+|+.+|..|.++|++|..+..+
T Consensus 30 K~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~ 62 (171)
T d1edza1 30 KKCIVINRSEIVGRPLAALLANDGATVYSVDVN 62 (171)
T ss_dssp CEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence 689999999999999999999999999877654
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=90.21 E-value=1.7 Score=29.16 Aligned_cols=71 Identities=20% Similarity=0.134 Sum_probs=48.6
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+|=.|+++| .++..+++.+.+|+.++.+++.++.+.+.+...+ .++.++..|..+ ..... ..+|
T Consensus 37 VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~~----------~~~~~-~~~D 102 (186)
T d1l3ia_ 37 AVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE----------ALCKI-PDID 102 (186)
T ss_dssp EEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH----------HHTTS-CCEE
T ss_pred EEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchhh----------ccccc-CCcC
Confidence 444566655 3345566777899999999999988888877665 478888887321 11112 5789
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
.++.+.+
T Consensus 103 ~v~~~~~ 109 (186)
T d1l3ia_ 103 IAVVGGS 109 (186)
T ss_dssp EEEESCC
T ss_pred EEEEeCc
Confidence 9987643
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.14 E-value=0.13 Score=37.45 Aligned_cols=32 Identities=16% Similarity=0.046 Sum_probs=28.9
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
|+|.|| |-.|+.+|..|.++|.+|+++.+.++
T Consensus 5 V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 5 VAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 889998 59999999999999999999998753
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=90.07 E-value=0.37 Score=32.38 Aligned_cols=36 Identities=17% Similarity=0.230 Sum_probs=31.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIEL 37 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~ 37 (202)
|+++|.|= |-+|+.+|+++-..|++|+++..+|-+.
T Consensus 24 k~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~a 59 (163)
T d1v8ba1 24 KIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA 59 (163)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH
T ss_pred CEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhh
Confidence 56777765 7999999999999999999999998543
|
| >d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methylase EF2452 species: Enterococcus faecalis [TaxId: 1351]
Probab=90.01 E-value=0.47 Score=32.33 Aligned_cols=70 Identities=11% Similarity=0.079 Sum_probs=47.4
Q ss_pred cCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEE
Q 028868 7 GGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILI 83 (202)
Q Consensus 7 Gas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi 83 (202)
.|||.+|.+ .+++|+ +|+.++.+.+..+.+.+.+... ..++.++..|+.+ +++++.+. +.+.|+|+
T Consensus 50 aGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~~------~l~~~~~~-~~~fDlIf 118 (182)
T d2fhpa1 50 SGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANR------ALEQFYEE-KLQFDLVL 118 (182)
T ss_dssp CTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH------HHHHHHHT-TCCEEEEE
T ss_pred cccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccchh------hhhhhccc-CCCcceEE
Confidence 355666664 567888 7999999988877776666533 3368888888643 34443333 25799999
Q ss_pred EcCC
Q 028868 84 NNAA 87 (202)
Q Consensus 84 ~~ag 87 (202)
..+-
T Consensus 119 lDPP 122 (182)
T d2fhpa1 119 LDPP 122 (182)
T ss_dssp ECCC
T ss_pred echh
Confidence 8764
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=90.00 E-value=0.15 Score=37.46 Aligned_cols=30 Identities=23% Similarity=0.320 Sum_probs=27.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|+|+|+ |..|...|.+++++|.+|+++.+.
T Consensus 19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~ 48 (308)
T d1y0pa2 19 VVVVGS-GGAGFSAAISATDSGAKVILIEKE 48 (308)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEecC
Confidence 688887 699999999999999999998874
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.71 E-value=0.88 Score=33.52 Aligned_cols=70 Identities=17% Similarity=0.101 Sum_probs=47.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+||-.|++.|+ ++..+++.|+ +|++++.++.. ..+.+..... ..++.++..|+.+... . ..
T Consensus 37 ~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~-~~ 101 (311)
T d2fyta1 37 KVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------P-VE 101 (311)
T ss_dssp CEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------S-CS
T ss_pred CEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------c-cc
Confidence 578999998776 5667788897 79999988753 3333333322 4568899998877321 0 14
Q ss_pred CccEEEEc
Q 028868 78 KLNILINN 85 (202)
Q Consensus 78 ~id~vi~~ 85 (202)
+.|+|+..
T Consensus 102 ~~D~Ivse 109 (311)
T d2fyta1 102 KVDVIISE 109 (311)
T ss_dssp CEEEEEEC
T ss_pred cceEEEEe
Confidence 68999874
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=89.53 E-value=0.93 Score=33.59 Aligned_cols=32 Identities=31% Similarity=0.416 Sum_probs=22.9
Q ss_pred CEEEE-ecCCCc---hHHHHHHHHHHCCCEEEEEeC
Q 028868 1 MTALV-TGGTRG---IGHATVEELARFGAIVHTCSR 32 (202)
Q Consensus 1 k~~lI-tGas~g---iG~a~a~~l~~~g~~Vi~~~r 32 (202)
|+||+ ++||+| =-.++|++|.++|++|.+++.
T Consensus 1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~ 36 (391)
T d1pn3a_ 1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLP 36 (391)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 45666 444432 346799999999999998874
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=89.38 E-value=1.6 Score=31.60 Aligned_cols=76 Identities=14% Similarity=0.171 Sum_probs=50.6
Q ss_pred EEEEecCCCc-hHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 2 TALVTGGTRG-IGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 2 ~~lItGas~g-iG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
+++-.|+++| |+.+++ + ..+++|++++.+++.++-+.+-....+ ..+.+...|+.+. ..+.+ ++
T Consensus 113 ~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~-~~ 179 (271)
T d1nv8a_ 113 TVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKF-AS 179 (271)
T ss_dssp EEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGT-TT
T ss_pred EEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------ccccc-Cc
Confidence 3454555555 555544 2 357799999999988877777665443 3566777787642 22333 68
Q ss_pred ccEEEEcCCCCC
Q 028868 79 LNILINNAAIAF 90 (202)
Q Consensus 79 id~vi~~ag~~~ 90 (202)
+|++|.|+-..+
T Consensus 180 fDlIVsNPPYI~ 191 (271)
T d1nv8a_ 180 IEMILSNPPYVK 191 (271)
T ss_dssp CCEEEECCCCBC
T ss_pred ccEEEEcccccC
Confidence 999999998764
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.35 E-value=0.24 Score=39.94 Aligned_cols=32 Identities=13% Similarity=0.132 Sum_probs=27.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
.+|+|.|+ ||+|.++++-|+..|. ++.++|.+
T Consensus 26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d 58 (529)
T d1yova1 26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN 58 (529)
T ss_dssp CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 36899998 7999999999999997 78887653
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=89.22 E-value=0.032 Score=39.55 Aligned_cols=26 Identities=27% Similarity=0.184 Sum_probs=22.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEE
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIV 27 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~V 27 (202)
++|+|+|| |-+|..+|.+|+++|.+|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 57899999 699999999999999753
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=89.18 E-value=0.36 Score=33.34 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=29.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
|++.|.|. |.||+.+|+.+...|++|+..++...
T Consensus 48 ~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~ 81 (191)
T d1gdha1 48 KTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA 81 (191)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred cceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence 57888887 79999999999999999999987643
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.14 E-value=0.26 Score=32.43 Aligned_cols=33 Identities=24% Similarity=0.279 Sum_probs=26.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC---EEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA---IVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~---~Vi~~~r~ 33 (202)
+.|-|.||||-.|+.+.+.|.++++ ++..++.+
T Consensus 3 mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~ 38 (144)
T d2hjsa1 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA 38 (144)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence 3588999999999999999987654 66665544
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=89.10 E-value=1.1 Score=29.95 Aligned_cols=65 Identities=8% Similarity=0.007 Sum_probs=39.9
Q ss_pred HHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 16 TVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 16 ~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
++...+++|++|+.++.+++..+.+.+.+...+....+...| .+. +....... +.+.|+|+.++-
T Consensus 55 ~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~---~d~---~~~~~~~~-~~~fD~If~DPP 119 (171)
T d1ws6a1 55 VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALP---VEV---FLPEAKAQ-GERFTVAFMAPP 119 (171)
T ss_dssp HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSC---HHH---HHHHHHHT-TCCEEEEEECCC
T ss_pred hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeeee---hhc---cccccccc-CCccceeEEccc
Confidence 344567789999999999988887777666544433333332 222 12222222 257999998764
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=89.08 E-value=0.18 Score=36.06 Aligned_cols=37 Identities=16% Similarity=0.206 Sum_probs=31.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHH
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDAR 40 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~ 40 (202)
++|+|| |.-|...|.+|+++|.+|+++.+++.-..+.
T Consensus 7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k~ 43 (253)
T d2gqfa1 7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRKI 43 (253)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHHH
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCce
Confidence 788888 6999999999999999999999986544443
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=89.07 E-value=0.15 Score=37.66 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=27.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
.++|+|| |--|..+|++|+++|.+|.++.++.
T Consensus 3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~ 34 (298)
T d1i8ta1 3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN 34 (298)
T ss_dssp EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence 4788888 6999999999999999999987753
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=88.77 E-value=0.27 Score=36.32 Aligned_cols=32 Identities=28% Similarity=0.327 Sum_probs=24.4
Q ss_pred CEEEEecCCCchHH-----HHHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGH-----ATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~-----a~a~~l~~~g~~Vi~~~r~ 33 (202)
|+++|++|+.| |- +++++|.++|++|..++..
T Consensus 1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 67788776544 54 6899999999999887654
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=88.74 E-value=0.37 Score=31.76 Aligned_cols=34 Identities=12% Similarity=-0.026 Sum_probs=26.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC-C---EEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFG-A---IVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g-~---~Vi~~~r~~ 34 (202)
|++-|.||||-.|+.+.+.|+++. + ++....++.
T Consensus 2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~ 39 (146)
T d1t4ba1 2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ 39 (146)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence 578899999999999999888764 2 666665543
|
| >d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Escherichia coli [TaxId: 562]
Probab=88.43 E-value=0.77 Score=33.52 Aligned_cols=73 Identities=14% Similarity=0.041 Sum_probs=51.1
Q ss_pred EEecC-CCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCC-eEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 4 LVTGG-TRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGF-KVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 4 lItGa-s~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~-~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
+=.|+ ||-||.+++..+ ...+|+.++-+++.++-+.+.....+. ++.++..|+-+.- .+.++|+
T Consensus 113 lDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~------------~~~~fDl 178 (274)
T d2b3ta1 113 LDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL------------AGQQFAM 178 (274)
T ss_dssp EEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG------------TTCCEEE
T ss_pred eeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc------------CCCceeE
Confidence 33444 456666666543 356999999999888877776665554 5899999976521 1257999
Q ss_pred EEEcCCCCC
Q 028868 82 LINNAAIAF 90 (202)
Q Consensus 82 vi~~ag~~~ 90 (202)
+|.|+-..+
T Consensus 179 IvsNPPYi~ 187 (274)
T d2b3ta1 179 IVSNPPYID 187 (274)
T ss_dssp EEECCCCBC
T ss_pred EEecchhhh
Confidence 999988754
|
| >d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Arsenite-translocating ATPase ArsA species: Escherichia coli [TaxId: 562]
Probab=88.10 E-value=0.23 Score=35.98 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=29.6
Q ss_pred CEEEEecCCCchHHHH-----HHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHAT-----VEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~-----a~~l~~~g~~Vi~~~r~~~ 35 (202)
+.++|+.|=||.|+.. |..|+++|.+|++++-++.
T Consensus 20 ~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~ 59 (279)
T d1ihua2 20 HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA 59 (279)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 3567777799999876 8999999999999999864
|
| >d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=87.99 E-value=0.2 Score=35.05 Aligned_cols=34 Identities=26% Similarity=0.294 Sum_probs=28.8
Q ss_pred CEEEEecCCCchHH-----HHHHHHHHCCCEEEEEeCCh
Q 028868 1 MTALVTGGTRGIGH-----ATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~-----a~a~~l~~~g~~Vi~~~r~~ 34 (202)
|++.|+++-||.|+ ++|..|+++|.+|.+++-+.
T Consensus 2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~ 40 (232)
T d1hyqa_ 2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI 40 (232)
T ss_dssp EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 67899999998886 56888999999999998764
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=87.95 E-value=0.25 Score=36.63 Aligned_cols=33 Identities=24% Similarity=0.228 Sum_probs=28.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChh
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~ 35 (202)
.|+|+|| |--|.++|++|.++|.+|++..+.++
T Consensus 9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 3789998 69999999999999999999887643
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=87.77 E-value=0.23 Score=33.34 Aligned_cols=27 Identities=15% Similarity=0.003 Sum_probs=22.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEE
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVH 28 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi 28 (202)
+.|+|.|| |.+|..+|..|.++|.+|.
T Consensus 4 ~~VvIIGg-G~~G~e~A~~l~~~g~~v~ 30 (185)
T d1q1ra1 4 DNVVIVGT-GLAGVEVAFGLRASGWEGN 30 (185)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSE
T ss_pred CCEEEECC-cHHHHHHHHHHHHcCCceE
Confidence 46788887 7999999999999998543
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.72 E-value=0.28 Score=36.11 Aligned_cols=30 Identities=27% Similarity=0.230 Sum_probs=26.2
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|+|+|| |--|.+.|.+|.++|.+|+++.+.
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~ 31 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEAR 31 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecC
Confidence 678888 688999999999999999998753
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=87.71 E-value=1.7 Score=31.89 Aligned_cols=73 Identities=16% Similarity=0.306 Sum_probs=49.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKN-----KGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|.|||.|+++| .++++++++. .+|.++.-+++-.+-..+.+.. ...++.++..| +++.+++
T Consensus 91 k~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~D---------a~~~l~~ 158 (295)
T d1inla_ 91 KKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIAN---------GAEYVRK 158 (295)
T ss_dssp CEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC---------HHHHGGG
T ss_pred ceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhh---------HHHHHhc
Confidence 67999999877 5677788764 4799999998776655444321 13567777777 3444444
Q ss_pred HhCCCccEEEEcC
Q 028868 74 IFQGKLNILINNA 86 (202)
Q Consensus 74 ~~~~~id~vi~~a 86 (202)
. ..+.|++|.-.
T Consensus 159 ~-~~~yDvIi~D~ 170 (295)
T d1inla_ 159 F-KNEFDVIIIDS 170 (295)
T ss_dssp C-SSCEEEEEEEC
T ss_pred C-CCCCCEEEEcC
Confidence 3 25789999753
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=87.64 E-value=0.3 Score=35.42 Aligned_cols=30 Identities=27% Similarity=0.330 Sum_probs=26.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS 31 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~ 31 (202)
|+++|-| .|.+|..+|+.|.+.|++|+.++
T Consensus 37 ~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs 66 (255)
T d1bgva1 37 KTVALAG-FGNVAWGAAKKLAELGAKAVTLS 66 (255)
T ss_dssp CEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence 5788888 58999999999999999988654
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.48 E-value=2 Score=29.04 Aligned_cols=73 Identities=19% Similarity=0.138 Sum_probs=50.0
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc---CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK---GFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~---~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
+++|=.|++.| .++..+++.+.+|.+++-++...+.+.+.+... ..++.++..|+.+. +. ..
T Consensus 54 ~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~------~~------~~ 118 (194)
T d1dusa_ 54 DDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN------VK------DR 118 (194)
T ss_dssp CEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT------CT------TS
T ss_pred CeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhh------hc------cC
Confidence 35666777665 345566778889999999988877776655433 34588888887641 11 14
Q ss_pred CccEEEEcCCC
Q 028868 78 KLNILINNAAI 88 (202)
Q Consensus 78 ~id~vi~~ag~ 88 (202)
..|+++.+.-.
T Consensus 119 ~fD~Ii~~~p~ 129 (194)
T d1dusa_ 119 KYNKIITNPPI 129 (194)
T ss_dssp CEEEEEECCCS
T ss_pred CceEEEEcccE
Confidence 78999987653
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.48 E-value=0.37 Score=34.96 Aligned_cols=30 Identities=23% Similarity=0.323 Sum_probs=26.2
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeC
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSR 32 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r 32 (202)
+|+|+|| |-=|+..|.+|.++|++|.++-+
T Consensus 7 kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa 36 (449)
T d2dw4a2 7 KVIIIGS-GVSGLAAARQLQSFGMDVTLLEA 36 (449)
T ss_dssp EEEEECC-BHHHHHHHHHHHHTTCEEEEECS
T ss_pred cEEEECC-CHHHHHHHHHHHhCCCCEEEEeC
Confidence 5899998 68899999999999999998744
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=87.24 E-value=0.31 Score=33.74 Aligned_cols=30 Identities=20% Similarity=0.302 Sum_probs=27.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
++|+|| |..|.+.|.++++.|.+|+++.++
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 688888 799999999999999999999875
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=87.22 E-value=0.11 Score=34.39 Aligned_cols=40 Identities=15% Similarity=-0.039 Sum_probs=28.1
Q ss_pred EecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH
Q 028868 5 VTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWK 45 (202)
Q Consensus 5 ItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~ 45 (202)
+.|+ |.+|+++++.|.+.+..+.+.+|+.++.+++.++..
T Consensus 4 fIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~ 43 (153)
T d2i76a2 4 FVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG 43 (153)
T ss_dssp EESC-CHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC
T ss_pred EEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc
Confidence 4454 799999999886544334588999999988877653
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=87.04 E-value=0.48 Score=31.36 Aligned_cols=24 Identities=25% Similarity=0.329 Sum_probs=21.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA 25 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~ 25 (202)
+|-|.||||-.|.++.+.|.+|.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 478999999999999999999965
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=87.03 E-value=0.27 Score=36.39 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=26.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|+|+|+ |.-|...|..++++|.+|+++.+.
T Consensus 26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~ 55 (322)
T d1d4ca2 26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKE 55 (322)
T ss_dssp EEEECS-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence 678887 688999999999999999999875
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=86.99 E-value=1.5 Score=30.76 Aligned_cols=72 Identities=13% Similarity=-0.064 Sum_probs=50.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNI 81 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~ 81 (202)
++|-.|+++|--.++ |++.+.+|+.+..+++..+.+.+.+. ...++.++..|..+. ..+ . ++.|.
T Consensus 73 ~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~-~~~nv~~~~~d~~~g---------~~~-~-~pfD~ 137 (224)
T d1vbfa_ 73 KVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLS-YYNNIKLILGDGTLG---------YEE-E-KPYDR 137 (224)
T ss_dssp EEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHT-TCSSEEEEESCGGGC---------CGG-G-CCEEE
T ss_pred eEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHh-cccccccccCchhhc---------chh-h-hhHHH
Confidence 588889887754444 66667799999999887777665543 356788888887541 111 1 57999
Q ss_pred EEEcCCC
Q 028868 82 LINNAAI 88 (202)
Q Consensus 82 vi~~ag~ 88 (202)
++.+++.
T Consensus 138 Iiv~~a~ 144 (224)
T d1vbfa_ 138 VVVWATA 144 (224)
T ss_dssp EEESSBB
T ss_pred HHhhcch
Confidence 9988774
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=86.84 E-value=0.34 Score=33.77 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=26.9
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ 34 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~ 34 (202)
.|+|+|| |--|+..|.+|.++|. +|.++.++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 3788888 6889999999999997 699887753
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.76 E-value=0.36 Score=35.37 Aligned_cols=44 Identities=20% Similarity=0.135 Sum_probs=33.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK 47 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~ 47 (202)
++||=.|++.|. ++..|+++|++|+.++.+++-++.+.+.....
T Consensus 58 ~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~ 101 (292)
T d1xvaa_ 58 HRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNR 101 (292)
T ss_dssp CEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT
T ss_pred CEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhc
Confidence 367778886664 46667889999999999998887776665443
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=86.64 E-value=1.5 Score=29.46 Aligned_cols=42 Identities=17% Similarity=0.056 Sum_probs=31.2
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CCEEE-EEeCChhHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARF-GAIVH-TCSRNQIELDARLHEW 44 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~-g~~Vi-~~~r~~~~~~~~~~~~ 44 (202)
++.|.|+ |.+|+..++.+... +.+|+ ++++++++.+...++.
T Consensus 3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~ 46 (184)
T d1ydwa1 3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATAN 46 (184)
T ss_dssp EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHT
T ss_pred EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhcc
Confidence 4678886 68999999988876 55776 5688887776665543
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=86.49 E-value=0.38 Score=35.78 Aligned_cols=34 Identities=18% Similarity=0.087 Sum_probs=28.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~ 35 (202)
|+|+|+|| |--|..+|..|+++| .+|++..|+.+
T Consensus 5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 78999998 688889999999877 48999888753
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=86.43 E-value=0.34 Score=33.47 Aligned_cols=31 Identities=16% Similarity=0.232 Sum_probs=27.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
++|+|| |..|.+.|..+++.|.+|+++.+.+
T Consensus 6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG 36 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 688898 6889999999999999999998753
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=86.37 E-value=1.8 Score=29.78 Aligned_cols=73 Identities=15% Similarity=0.055 Sum_probs=50.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+||=.|++.|.- +..++++|.+|+.++-+++-++.+.+.+...+ .++.++..|..+.. +. .+..|
T Consensus 18 rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~~------~~~fD 83 (231)
T d1vl5a_ 18 EVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----FT------DERFH 83 (231)
T ss_dssp EEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----SC------TTCEE
T ss_pred EEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----cc------ccccc
Confidence 577788876643 45678889999999999988877766665443 46888888877621 00 14688
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
+|+.....
T Consensus 84 ~v~~~~~l 91 (231)
T d1vl5a_ 84 IVTCRIAA 91 (231)
T ss_dssp EEEEESCG
T ss_pred cccccccc
Confidence 88876654
|
| >d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=86.06 E-value=4.2 Score=29.57 Aligned_cols=55 Identities=13% Similarity=-0.039 Sum_probs=33.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDL 58 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv 58 (202)
.+|+..+|.-|.++|......|.+.+++...... ......++..|.++..+..+.
T Consensus 71 ~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~k~~~l~~~Ga~vi~~~~~~ 125 (318)
T d1v71a1 71 GVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAP-EAKVAATKGYGGQVIMYDRYK 125 (318)
T ss_dssp CEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCC-HHHHHHHHHTTCEEEEECTTT
T ss_pred eeeeeccchhhHHHHHhhcccccceeeccccccc-HHHHHHHHHcCCcEEeccCCc
Confidence 3678888999999999999999865444322111 122333445566665554433
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=86.01 E-value=4.6 Score=29.07 Aligned_cols=73 Identities=21% Similarity=0.229 Sum_probs=45.6
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHH-----------hcCCeEEEEEecCCCHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWK-----------NKGFKVTGSVCDLSSREQREKLI 68 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~-----------~~~~~v~~~~~Dv~~~~~i~~~~ 68 (202)
|.|||.|+++| .+++++++++. +|.++.-+++-.+-..+.+. ....++.++..|. .
T Consensus 74 ~~vLiiG~G~G---~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da---------~ 141 (276)
T d1mjfa_ 74 KRVLVIGGGDG---GTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDG---------F 141 (276)
T ss_dssp CEEEEEECTTS---HHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCH---------H
T ss_pred ceEEEecCCch---HHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChH---------H
Confidence 57999999866 33455566654 78888888766655443221 1234678877774 2
Q ss_pred HHHHHHhCCCccEEEEcCC
Q 028868 69 ETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 69 ~~~~~~~~~~id~vi~~ag 87 (202)
+.+++ ..+.|++|.-+-
T Consensus 142 ~~l~~--~~~yDvIi~D~~ 158 (276)
T d1mjfa_ 142 EFIKN--NRGFDVIIADST 158 (276)
T ss_dssp HHHHH--CCCEEEEEEECC
T ss_pred HHHhc--cCCCCEEEEeCC
Confidence 33333 257999998654
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=86.00 E-value=0.49 Score=33.91 Aligned_cols=30 Identities=30% Similarity=0.335 Sum_probs=25.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS 31 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~ 31 (202)
|+++|-| .|.+|.++|+.|.+.|++|+.++
T Consensus 32 ~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs 61 (242)
T d1v9la1 32 KTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS 61 (242)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence 5677776 58999999999999999998655
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=85.78 E-value=1.9 Score=29.82 Aligned_cols=76 Identities=12% Similarity=0.091 Sum_probs=54.0
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+||-+|+.+|--.++..++...+.+|+.++.+++..+.+.+.+...+ .++.++..|..+. . .. .++.|
T Consensus 78 ~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~------~----~~-~~~fD 146 (213)
T d1dl5a1 78 RVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG------V----PE-FSPYD 146 (213)
T ss_dssp EEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC------C----GG-GCCEE
T ss_pred eEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHc------c----cc-ccchh
Confidence 68889988877666655556566699999999998888888776554 3567777775431 0 01 15789
Q ss_pred EEEEcCCC
Q 028868 81 ILINNAAI 88 (202)
Q Consensus 81 ~vi~~ag~ 88 (202)
.++.+++.
T Consensus 147 ~I~~~~~~ 154 (213)
T d1dl5a1 147 VIFVTVGV 154 (213)
T ss_dssp EEEECSBB
T ss_pred hhhhhccH
Confidence 99988775
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=85.76 E-value=0.34 Score=35.85 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=26.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|+|+|+ |..|...|.+++++|.+|+++.+.
T Consensus 22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~ 51 (317)
T d1qo8a2 22 VLVVGA-GSAGFNASLAAKKAGANVILVDKA 51 (317)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCC
Confidence 688887 799999999999999999999764
|
| >d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Cell division regulator MinD species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=85.68 E-value=0.36 Score=33.70 Aligned_cols=33 Identities=18% Similarity=0.218 Sum_probs=28.1
Q ss_pred CEEEEecCCCchHH-----HHHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGH-----ATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~-----a~a~~l~~~g~~Vi~~~r~ 33 (202)
|++.|+|+-||.|+ ++|..|+++|.+|++++-+
T Consensus 3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D 40 (237)
T d1g3qa_ 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 56889999999887 5788889999999999865
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=85.68 E-value=0.59 Score=34.52 Aligned_cols=30 Identities=30% Similarity=0.339 Sum_probs=25.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS 31 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~ 31 (202)
|+++|-|- |.+|.++|+.|.+.|++|+.++
T Consensus 37 ktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs 66 (293)
T d1hwxa1 37 KTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG 66 (293)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence 46777776 8999999999999999998765
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=85.46 E-value=3.7 Score=30.32 Aligned_cols=74 Identities=16% Similarity=0.283 Sum_probs=49.3
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKN-----KGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|.|||.|+++| .+++.++++. .+|.++.-+++..+...+.+.. ...++.++..| ..+.+++
T Consensus 108 k~VLIiGgG~G---~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~D---------a~~~l~~ 175 (312)
T d2b2ca1 108 KRVLIIGGGDG---GILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD---------GFEFLKN 175 (312)
T ss_dssp CEEEEESCTTS---HHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC---------HHHHHHH
T ss_pred CeEEEeCCCch---HHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEch---------HHHHHHh
Confidence 67999999876 4566777764 4899999998777666554432 13456776666 3344444
Q ss_pred HhCCCccEEEEcCC
Q 028868 74 IFQGKLNILINNAA 87 (202)
Q Consensus 74 ~~~~~id~vi~~ag 87 (202)
. ..+.|+||.-+-
T Consensus 176 ~-~~~yDvII~D~~ 188 (312)
T d2b2ca1 176 H-KNEFDVIITDSS 188 (312)
T ss_dssp C-TTCEEEEEECCC
T ss_pred C-CCCCCEEEEcCC
Confidence 3 257999998543
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=85.39 E-value=0.72 Score=30.43 Aligned_cols=33 Identities=21% Similarity=0.197 Sum_probs=26.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ 34 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~ 34 (202)
|+++|.|| |..|.-.|..+.+.|+ .|.++.|..
T Consensus 46 ~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 46 GAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp SEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 46788877 7999999999999998 576777643
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=85.03 E-value=0.68 Score=31.44 Aligned_cols=32 Identities=22% Similarity=0.112 Sum_probs=26.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|-|.||||-.|..+.+.|.+|-. ++..+..+
T Consensus 3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 688999999999999999999876 66655443
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.02 E-value=0.49 Score=32.80 Aligned_cols=31 Identities=16% Similarity=0.270 Sum_probs=27.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
++|+|| |.-|...|.++++.|.+|+++.+.+
T Consensus 8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 688888 5779999999999999999998754
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=84.99 E-value=0.6 Score=31.77 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=26.8
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~ 33 (202)
|+++|.|| |.+|.++|..|.+.+ .+|++..|+
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~ 34 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKG 34 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 67899998 599999999999874 478888765
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.99 E-value=1.9 Score=30.15 Aligned_cols=77 Identities=17% Similarity=0.060 Sum_probs=57.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHHHHHHh
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIETVTSIF 75 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dv~~~~~i~~~~~~~~~~~ 75 (202)
+||-.|+++|--.++.-+++....+|+.++++++..+.+.+.+... ..++.+...|..+. . ...
T Consensus 79 ~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~---------~-~~~ 148 (224)
T d1i1na_ 79 KALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG---------Y-AEE 148 (224)
T ss_dssp EEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC---------C-GGG
T ss_pred eEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc---------c-chh
Confidence 6899999999888888888877779999999998888777766543 24577777776431 0 011
Q ss_pred CCCccEEEEcCCCC
Q 028868 76 QGKLNILINNAAIA 89 (202)
Q Consensus 76 ~~~id~vi~~ag~~ 89 (202)
.+.|.++.+++..
T Consensus 149 -~~fD~I~~~~~~~ 161 (224)
T d1i1na_ 149 -APYDAIHVGAAAP 161 (224)
T ss_dssp -CCEEEEEECSBBS
T ss_pred -hhhhhhhhhcchh
Confidence 5789999988753
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=84.95 E-value=0.39 Score=32.73 Aligned_cols=32 Identities=13% Similarity=-0.050 Sum_probs=27.2
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
+.++|+|| |..|...|..+++.|.+|+++.+.
T Consensus 6 ~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~ 37 (192)
T d1vdca1 6 TRLCIVGS-GPAAHTAAIYAARAELKPLLFEGW 37 (192)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTCCCEEECCS
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCcEEEEEee
Confidence 35888888 689999999999999999888753
|
| >d1a9xa2 c.24.1.1 (A:936-1073) Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Methylglyoxal synthase-like superfamily: Methylglyoxal synthase-like family: Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain domain: Carbamoyl phosphate synthetase, large subunit allosteric, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=84.85 E-value=1.2 Score=28.94 Aligned_cols=63 Identities=13% Similarity=0.064 Sum_probs=39.2
Q ss_pred hHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 12 IGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 12 iG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
-...+|+.|.+.|++++.+.- +..-+.+.|..+..+.-.-....++.+.+.. ++||+|||...
T Consensus 21 ~~~~~ak~l~~lGf~i~AT~G-------Ta~~L~~~Gi~~~~v~ki~~~~p~i~d~i~~------gkidlVINt~~ 83 (138)
T d1a9xa2 21 RVVDLAAKLLKQGFELDATHG-------TAIVLGEAGINPRLVNKVHEGRPHIQDRIKN------GEYTYIINTTS 83 (138)
T ss_dssp THHHHHHHHHHTTCEEEECHH-------HHHHHHTTTCCCEECBCTTTCSSBHHHHHHH------TCCSEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEecCc-------hHHHHHHhccccccccccccccccHhHHHhc------CCeEEEEECCC
Confidence 356899999999999999643 3444445565555443222222333334332 78999999754
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=84.82 E-value=2.2 Score=29.44 Aligned_cols=82 Identities=12% Similarity=0.058 Sum_probs=53.7
Q ss_pred EEEEecCCCc-hHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC--CeEEEEEecCCC------------------
Q 028868 2 TALVTGGTRG-IGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSS------------------ 60 (202)
Q Consensus 2 ~~lItGas~g-iG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dv~~------------------ 60 (202)
++|=.|++.| +...+++++...+++|++++-+++-++.+.+.+.+.+ ..+.....|..+
T Consensus 42 ~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~~~~~~d~i~~~~~l~~~ 121 (225)
T d1im8a_ 42 NVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFTLQFL 121 (225)
T ss_dssp EEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTCCCCSEEEEEEESCGGGS
T ss_pred EEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhccccccceeeEEeeecccc
Confidence 5677787655 3455665555578999999999998888877765432 234444444432
Q ss_pred -HHHHHHHHHHHHHHhCCCccEEEEc
Q 028868 61 -REQREKLIETVTSIFQGKLNILINN 85 (202)
Q Consensus 61 -~~~i~~~~~~~~~~~~~~id~vi~~ 85 (202)
.++..++++++.+.+ ++++.+..
T Consensus 122 ~~~d~~~~l~~i~~~L--kpgG~li~ 145 (225)
T d1im8a_ 122 PPEDRIALLTKIYEGL--NPNGVLVL 145 (225)
T ss_dssp CGGGHHHHHHHHHHHE--EEEEEEEE
T ss_pred ChhhHHHHHHHHHHhC--CCCceeec
Confidence 456677888888775 55665443
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=84.62 E-value=2.4 Score=31.14 Aligned_cols=71 Identities=24% Similarity=0.135 Sum_probs=46.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+||-.|++.|+ ++..+++.|+ +|+.++.++. ...+.+..... ..++.++..|+.+.+. . ..
T Consensus 35 ~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------~-~~ 99 (316)
T d1oria_ 35 KVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------P-VE 99 (316)
T ss_dssp CEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------S-SS
T ss_pred CEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------c-cc
Confidence 578999998875 5566788886 7999997753 33443333322 4568899988876321 1 14
Q ss_pred CccEEEEcC
Q 028868 78 KLNILINNA 86 (202)
Q Consensus 78 ~id~vi~~a 86 (202)
++|+++...
T Consensus 100 ~~D~ivs~~ 108 (316)
T d1oria_ 100 KVDIIISEW 108 (316)
T ss_dssp CEEEEEECC
T ss_pred eeEEEeeee
Confidence 688888753
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=84.62 E-value=0.69 Score=32.76 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=27.3
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCCh
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRNQ 34 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~ 34 (202)
.|+|+|| |--|+.+|..|.++|. .|.+..|.+
T Consensus 3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~ 35 (288)
T d3c96a1 3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS 35 (288)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 5889998 5889999999999995 888887754
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=84.50 E-value=0.57 Score=31.91 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=26.5
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~ 33 (202)
+|-|.||||-.|..+.+.|.+|-+ ++..+..+
T Consensus 7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~ 39 (183)
T d2cvoa1 7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTAD 39 (183)
T ss_dssp EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred EEEEECcccHHHHHHHHHHHhCCCceEEEEecc
Confidence 488999999999999999999976 66655443
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=84.46 E-value=0.52 Score=31.48 Aligned_cols=30 Identities=23% Similarity=0.190 Sum_probs=26.5
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
++|.|| |..|...|..+++.|.+|+++.+.
T Consensus 4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~ 33 (184)
T d1fl2a1 4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGER 33 (184)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHcCCeEEEEEEe
Confidence 678888 799999999999999999998764
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=84.37 E-value=0.37 Score=32.65 Aligned_cols=31 Identities=16% Similarity=0.028 Sum_probs=27.1
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
.++|+|| |..|...|..+++.|.+|+++.+.
T Consensus 7 dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~ 37 (190)
T d1trba1 7 KLLILGS-GPAGYTAAVYAARANLQPVLITGM 37 (190)
T ss_dssp EEEEECC-SHHHHHHHHHHHTTTCCCEEECCS
T ss_pred cEEEECC-CHHHHHHHHHHHHcCCceEEEEee
Confidence 5889998 689999999999999999988754
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=84.34 E-value=0.67 Score=31.34 Aligned_cols=28 Identities=18% Similarity=0.274 Sum_probs=24.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCC-EEEE
Q 028868 2 TALVTGGTRGIGHATVEELARFGA-IVHT 29 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~-~Vi~ 29 (202)
+|.|.||||-.|..+.+.|.+|.+ ++..
T Consensus 3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~ 31 (179)
T d2g17a1 3 NTLIVGASGYAGAELVSYVNRHPHMTITA 31 (179)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTEEEEE
T ss_pred EEEEECcccHHHHHHHHHHHhCCCCceEe
Confidence 689999999999999999999954 6653
|
| >d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Nitrogenase iron protein-like domain: Nitrogenase iron protein species: Clostridium pasteurianum [TaxId: 1501]
Probab=84.20 E-value=0.33 Score=34.97 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=27.6
Q ss_pred CEEEEecCCCchHHH-----HHHHHHHCCCEEEEEeCChh
Q 028868 1 MTALVTGGTRGIGHA-----TVEELARFGAIVHTCSRNQI 35 (202)
Q Consensus 1 k~~lItGas~giG~a-----~a~~l~~~g~~Vi~~~r~~~ 35 (202)
|++.|+| =||.|+. +|..|++.|++|+++|-+++
T Consensus 2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q 40 (269)
T d1cp2a_ 2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK 40 (269)
T ss_dssp EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence 5677888 7888865 56789999999999998753
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=84.08 E-value=3 Score=30.76 Aligned_cols=73 Identities=12% Similarity=0.164 Sum_probs=47.5
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHh------cCCeEEEEEecCCCHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKN------KGFKVTGSVCDLSSREQREKLIETVT 72 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~------~~~~v~~~~~Dv~~~~~i~~~~~~~~ 72 (202)
|.|||.|+++| .++++++++. .+|.++.-+++-.+...+.+.. ...++.++..| +.+.++
T Consensus 79 k~VLiiG~G~G---~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~D---------a~~~l~ 146 (312)
T d1uira_ 79 KRVLIVGGGEG---ATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDD---------ARAYLE 146 (312)
T ss_dssp CEEEEEECTTS---HHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESC---------HHHHHH
T ss_pred ceEEEeCCCch---HHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEch---------HHHHhh
Confidence 67999999866 4455566553 4899999998877666554422 13467777777 333444
Q ss_pred HHhCCCccEEEEcC
Q 028868 73 SIFQGKLNILINNA 86 (202)
Q Consensus 73 ~~~~~~id~vi~~a 86 (202)
+. +.+.|++|.-.
T Consensus 147 ~~-~~~yDvIi~D~ 159 (312)
T d1uira_ 147 RT-EERYDVVIIDL 159 (312)
T ss_dssp HC-CCCEEEEEEEC
T ss_pred hc-CCcccEEEEeC
Confidence 43 35789998654
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.95 E-value=2.9 Score=30.41 Aligned_cols=73 Identities=18% Similarity=0.257 Sum_probs=49.7
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC--CEEEEEeCChhHHHHHHHHHHh-----cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARFG--AIVHTCSRNQIELDARLHEWKN-----KGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g--~~Vi~~~r~~~~~~~~~~~~~~-----~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|.+||.|+++| .+++.++++. .+|.++.-+++-.+-+.+.+.. ...++.++..| +.+.+++
T Consensus 80 k~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~D---------a~~~l~~ 147 (285)
T d2o07a1 80 RKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGD---------GFEFMKQ 147 (285)
T ss_dssp CEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC---------HHHHHHT
T ss_pred CeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEcc---------HHHHHhc
Confidence 67999999877 5666777762 4888888888766655554321 24578888777 3444544
Q ss_pred HhCCCccEEEEcC
Q 028868 74 IFQGKLNILINNA 86 (202)
Q Consensus 74 ~~~~~id~vi~~a 86 (202)
.- .+.|++|.-+
T Consensus 148 ~~-~~yDvIi~D~ 159 (285)
T d2o07a1 148 NQ-DAFDVIITDS 159 (285)
T ss_dssp CS-SCEEEEEEEC
T ss_pred CC-CCCCEEEEcC
Confidence 32 5789999864
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=83.94 E-value=0.27 Score=33.05 Aligned_cols=83 Identities=11% Similarity=0.143 Sum_probs=52.1
Q ss_pred EEEEecCCCchHHHHHHHHHHC-CCEEE-EEeCChhH-HHHHHHH--------------HHhcCCeEEEEEecCCCHHHH
Q 028868 2 TALVTGGTRGIGHATVEELARF-GAIVH-TCSRNQIE-LDARLHE--------------WKNKGFKVTGSVCDLSSREQR 64 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~-g~~Vi-~~~r~~~~-~~~~~~~--------------~~~~~~~v~~~~~Dv~~~~~i 64 (202)
++.|.|++|-+|+++++...+. +++++ .++|.... ...-..+ +...-.... +-.|.|.++..
T Consensus 6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~~ 84 (162)
T d1diha1 6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGT 84 (162)
T ss_dssp EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHHH
Confidence 5899999999999999999886 55655 33442211 0000000 000000111 34799999999
Q ss_pred HHHHHHHHHHhCCCccEEEEcCCC
Q 028868 65 EKLIETVTSIFQGKLNILINNAAI 88 (202)
Q Consensus 65 ~~~~~~~~~~~~~~id~vi~~ag~ 88 (202)
.+.++...+. ++.+|+-..|+
T Consensus 85 ~~~~~~a~~~---~~~~ViGTTG~ 105 (162)
T d1diha1 85 LNHLAFCRQH---GKGMVIGTTGF 105 (162)
T ss_dssp HHHHHHHHHT---TCEEEECCCCC
T ss_pred HHHHHHHHhc---cceeEEecCCC
Confidence 9888877654 57888888885
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.91 E-value=4.2 Score=30.35 Aligned_cols=52 Identities=8% Similarity=0.082 Sum_probs=32.8
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCeEEEE
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGS 54 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~ 54 (202)
..+|+..+|.-|.++|......|.+.+++....... ...+.++..|.++..+
T Consensus 98 ~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~-~k~~~i~~~GA~vv~v 149 (355)
T d1jbqa_ 98 DTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSS-EKVDVLRALGAEIVRT 149 (355)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCH-HHHHHHHHTTCEEEEC
T ss_pred ceEEEecccchhhHHHHHHHhccCCeEEEeeccchH-HHHHHHHhcCCeEEEe
Confidence 357888889999999999999999665544321111 1222344455555443
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=83.82 E-value=6.1 Score=28.65 Aligned_cols=75 Identities=19% Similarity=0.338 Sum_probs=50.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHC-C-CEEEEEeCChhHHHHHHHHHH-----hcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHATVEELARF-G-AIVHTCSRNQIELDARLHEWK-----NKGFKVTGSVCDLSSREQREKLIETVTS 73 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~-g-~~Vi~~~r~~~~~~~~~~~~~-----~~~~~v~~~~~Dv~~~~~i~~~~~~~~~ 73 (202)
|.|||.|+++| .++++++++ + .+|.++.-+++..+...+.+. ....++..+..| .++.+++
T Consensus 82 k~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~D---------a~~~l~~ 149 (290)
T d1xj5a_ 82 KKVLVIGGGDG---GVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGD---------GVAFLKN 149 (290)
T ss_dssp CEEEEETCSSS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESC---------HHHHHHT
T ss_pred cceEEecCCch---HHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEcc---------HHHHHhh
Confidence 67999999877 456677776 3 378899999877666555432 124567887777 3445544
Q ss_pred HhCCCccEEEEcCC
Q 028868 74 IFQGKLNILINNAA 87 (202)
Q Consensus 74 ~~~~~id~vi~~ag 87 (202)
.-..+.|++|.-+-
T Consensus 150 ~~~~~yDvIi~D~~ 163 (290)
T d1xj5a_ 150 AAEGSYDAVIVDSS 163 (290)
T ss_dssp SCTTCEEEEEECCC
T ss_pred ccccCccEEEEcCC
Confidence 32247999998654
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=83.76 E-value=4.4 Score=26.89 Aligned_cols=75 Identities=20% Similarity=0.207 Sum_probs=45.2
Q ss_pred CEEEEecCCCchHHH--HHHHHHHC----CCEEEEEeCChhHHHHHHHHHHh----cCCeEEEEEecCCCHHHHHHHHHH
Q 028868 1 MTALVTGGTRGIGHA--TVEELARF----GAIVHTCSRNQIELDARLHEWKN----KGFKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 1 k~~lItGas~giG~a--~a~~l~~~----g~~Vi~~~r~~~~~~~~~~~~~~----~~~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
+++.|.|| |.+|.. +...++.. +.++++.+.++++++.....+.+ .+....+...+ | ..+.+
T Consensus 3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~t--d---~~eaL-- 74 (171)
T d1obba1 3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTM--N---LDDVI-- 74 (171)
T ss_dssp CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEES--C---HHHHH--
T ss_pred cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeC--C---hhhcc--
Confidence 46788997 666654 44445543 35999999999887765444432 23333333322 1 11122
Q ss_pred HHHHhCCCccEEEEcCCCC
Q 028868 71 VTSIFQGKLNILINNAAIA 89 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~~ 89 (202)
...|+++++++..
T Consensus 75 ------~dad~Vv~~~~~g 87 (171)
T d1obba1 75 ------IDADFVINTAMVG 87 (171)
T ss_dssp ------TTCSEEEECCCTT
T ss_pred ------cCCCeEeeecccc
Confidence 3579999998864
|
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=83.67 E-value=4.2 Score=27.73 Aligned_cols=84 Identities=15% Similarity=0.117 Sum_probs=48.0
Q ss_pred EEE-EecCCCchHH-----HHHHHHHHCC-----CEEEEEeCChhHHHHHHHH----HHh----------cCCeEEEEEe
Q 028868 2 TAL-VTGGTRGIGH-----ATVEELARFG-----AIVHTCSRNQIELDARLHE----WKN----------KGFKVTGSVC 56 (202)
Q Consensus 2 ~~l-ItGas~giG~-----a~a~~l~~~g-----~~Vi~~~r~~~~~~~~~~~----~~~----------~~~~v~~~~~ 56 (202)
|++ |.||||.+.+ ++-..+ ..| .+|+.++|++-..+...+. +.. .-..+.+++.
T Consensus 6 t~lVIFGaTGDLa~RKL~PAL~~L~-~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~y~~~ 84 (195)
T d1h9aa1 6 TLVTFFGGTGDLAKRKLYPSVFNLY-KKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAH 84 (195)
T ss_dssp EEEEEETTTSHHHHHTHHHHHHHHH-HTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEEEEEC
T ss_pred eEEEEECcccHHHHhHHHHHHHHHH-HcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccceeeE
Confidence 444 7899998876 333333 333 5899999975333332222 211 1246788889
Q ss_pred cCCCHHHHHHHHHHH---HHHhCCCccEEEEcC
Q 028868 57 DLSSREQREKLIETV---TSIFQGKLNILINNA 86 (202)
Q Consensus 57 Dv~~~~~i~~~~~~~---~~~~~~~id~vi~~a 86 (202)
|+.+.++..++.+.+ .+..+..-..+++-|
T Consensus 85 ~~~~~~~~~~l~~~l~~~~~~~~~~~~rifYLA 117 (195)
T d1h9aa1 85 DVTDAASYAVLKEAIEEAADKFDIDGNRIFYMS 117 (195)
T ss_dssp CTTCTTTHHHHHHHHHHHHHHHTCCSCEEEEEC
T ss_pred eeccHhhHHHHHHHHHHHHhhcCCCcceEEEEe
Confidence 998876655554444 444433444555544
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.46 E-value=0.68 Score=31.86 Aligned_cols=31 Identities=29% Similarity=0.371 Sum_probs=27.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
++|+|| |..|...|.++++.|.+|+++.+..
T Consensus 6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~ 36 (221)
T d3grsa1 6 YLVIGG-GSGGLASARRAAELGARAAVVESHK 36 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence 577877 7899999999999999999998753
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=83.44 E-value=0.71 Score=30.26 Aligned_cols=30 Identities=13% Similarity=0.178 Sum_probs=24.7
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
+++|.|| |.+|.++|..|. ++.+|.++.+.
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~ 31 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKE 31 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEecc
Confidence 5788888 699999999885 57799988764
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=83.15 E-value=4.2 Score=26.23 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=41.0
Q ss_pred HHHHCCC-EEEEEeCChhHHHHHHHHHHhcC--CeEEEEEecCCCHHHHHHHHHHHHHHhCCCccEEEEcCC
Q 028868 19 ELARFGA-IVHTCSRNQIELDARLHEWKNKG--FKVTGSVCDLSSREQREKLIETVTSIFQGKLNILINNAA 87 (202)
Q Consensus 19 ~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~~--~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id~vi~~ag 87 (202)
..+.+|+ +|+.++.+++..+.+.+.+...+ .++.+++.|..+ .++ .. ..+.|+++..+-
T Consensus 31 ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~---~~-~~~fDiIf~DPP 92 (152)
T d2esra1 31 EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID---CL-TGRFDLVFLDPP 92 (152)
T ss_dssp HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH---HB-CSCEEEEEECCS
T ss_pred HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc---cc-ccccceeEechh
Confidence 4567887 89999999988877777665443 458888888432 222 22 357899988764
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=82.80 E-value=0.58 Score=33.78 Aligned_cols=31 Identities=16% Similarity=0.244 Sum_probs=27.4
Q ss_pred EEEecCCCchHHHHHHHHHHC-CCEEEEEeCCh
Q 028868 3 ALVTGGTRGIGHATVEELARF-GAIVHTCSRNQ 34 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~-g~~Vi~~~r~~ 34 (202)
++|+|| |--|+..|.+|+++ |.+|.++.+.+
T Consensus 36 ViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~ 67 (278)
T d1rp0a1 36 VVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV 67 (278)
T ss_dssp EEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence 789998 79999999999985 99999998764
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=82.64 E-value=0.6 Score=32.32 Aligned_cols=30 Identities=17% Similarity=0.190 Sum_probs=27.1
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
++|+|| |..|...|..+++.|.+|+++.+.
T Consensus 8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~ 37 (220)
T d1lvla1 8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ 37 (220)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence 688886 689999999999999999999875
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=82.49 E-value=2.8 Score=29.00 Aligned_cols=72 Identities=14% Similarity=0.059 Sum_probs=49.4
Q ss_pred EEEEecCCCchHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHhCCCcc
Q 028868 2 TALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKG-FKVTGSVCDLSSREQREKLIETVTSIFQGKLN 80 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~~~~~~~~~~~~~~~-~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~id 80 (202)
+||=.|++.|. ++..|++++.+|+.++-+++.++.+.+.+...+ .++.++..|+.+.. +. .+.+|
T Consensus 19 rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~~------~~~fD 84 (234)
T d1xxla_ 19 RVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----FP------DDSFD 84 (234)
T ss_dssp EEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----SC------TTCEE
T ss_pred EEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-----cc------ccccc
Confidence 56777887773 445677888999999999988877776665544 35888888876521 00 14678
Q ss_pred EEEEcCC
Q 028868 81 ILINNAA 87 (202)
Q Consensus 81 ~vi~~ag 87 (202)
+|+.+-.
T Consensus 85 ~v~~~~~ 91 (234)
T d1xxla_ 85 IITCRYA 91 (234)
T ss_dssp EEEEESC
T ss_pred eeeeece
Confidence 7766544
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=82.30 E-value=0.6 Score=34.43 Aligned_cols=30 Identities=23% Similarity=0.131 Sum_probs=26.4
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRN 33 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~ 33 (202)
|+|+|+ |.-|...|.+++++|.+|+++.+.
T Consensus 8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~ 37 (336)
T d2bs2a2 8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLI 37 (336)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEECSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCCEEEEecC
Confidence 688886 688999999999999999998764
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=82.24 E-value=0.54 Score=34.69 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=26.4
Q ss_pred EEEecCCCchHHHHHHHHHH-----CCCEEEEEeCCh
Q 028868 3 ALVTGGTRGIGHATVEELAR-----FGAIVHTCSRNQ 34 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~-----~g~~Vi~~~r~~ 34 (202)
|+|+|| |-.|..+|..|++ .|.+|+++.|.+
T Consensus 10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~ 45 (360)
T d1pn0a1 10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS 45 (360)
T ss_dssp EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence 788888 6999999999974 699999998754
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.24 E-value=0.94 Score=31.47 Aligned_cols=84 Identities=10% Similarity=0.081 Sum_probs=52.4
Q ss_pred EEEEecCCCchHH-----HHHHHHHHC-----CCEEEEEeCChhHHHHHHHHHH--------------hcCCeEEEEEec
Q 028868 2 TALVTGGTRGIGH-----ATVEELARF-----GAIVHTCSRNQIELDARLHEWK--------------NKGFKVTGSVCD 57 (202)
Q Consensus 2 ~~lItGas~giG~-----a~a~~l~~~-----g~~Vi~~~r~~~~~~~~~~~~~--------------~~~~~v~~~~~D 57 (202)
+.+|.||||.+.+ ++-. |... +.+|+.++|++-..+...+.+. +.-..+.++..|
T Consensus 22 t~VIFGatGDLA~RKL~PALf~-L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~d 100 (203)
T d1qkia1 22 IFIIMGASGDLAKKKIYPTIWW-LFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQ 100 (203)
T ss_dssp EEEEETTTSHHHHHTHHHHHHH-HHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBCC
T ss_pred EEEEECcccHHHHhHHHHHHHH-HHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccCc
Confidence 5799999998875 3322 2333 3589999997543333333221 112468889999
Q ss_pred CCCHHHHHHHHHHHHHHh-CCCccEEEEcC
Q 028868 58 LSSREQREKLIETVTSIF-QGKLNILINNA 86 (202)
Q Consensus 58 v~~~~~i~~~~~~~~~~~-~~~id~vi~~a 86 (202)
.++.++.+++.+.+.+.. +..-+.+++-|
T Consensus 101 ~~~~~~~~~L~~~l~~~~~~~~~~rifYLA 130 (203)
T d1qkia1 101 YDDAASYQRLNSHMNALHLGSQANRLFYLA 130 (203)
T ss_dssp TTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred CCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence 999999888877776542 12334455433
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=82.16 E-value=3.8 Score=28.01 Aligned_cols=30 Identities=20% Similarity=0.208 Sum_probs=24.1
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCCEEEEEe
Q 028868 1 MTALVTGGTRGIGHATVEELARFGAIVHTCS 31 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~~Vi~~~ 31 (202)
|++++.|. +..|..+.+.|.+.|.+|+.+.
T Consensus 1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vv 30 (203)
T d2blna2 1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIF 30 (203)
T ss_dssp CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEec-CHHHHHHHHHHHHCCCCEEEEE
Confidence 56777755 6799999999999999887543
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=81.98 E-value=1.8 Score=31.20 Aligned_cols=72 Identities=15% Similarity=0.036 Sum_probs=50.3
Q ss_pred EEEEecCCCchHHHHHHHHHH---CCCEEEEEeCChhHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHhCCC
Q 028868 2 TALVTGGTRGIGHATVEELAR---FGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGK 78 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~---~g~~Vi~~~r~~~~~~~~~~~~~~~~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~~ 78 (202)
+||=.|++.| .++..|++ .|.+|+.++.+++.++.+.+.....+.++.+...|+.+.. +.++
T Consensus 30 ~ILDiGcG~G---~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~------------~~~~ 94 (281)
T d2gh1a1 30 HIVDYGCGYG---YLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE------------LNDK 94 (281)
T ss_dssp EEEEETCTTT---HHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC------------CSSC
T ss_pred EEEEecCcCC---HHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc------------ccCC
Confidence 5666777655 23334443 5789999999999888888887777778889888987621 1245
Q ss_pred ccEEEEcCCC
Q 028868 79 LNILINNAAI 88 (202)
Q Consensus 79 id~vi~~ag~ 88 (202)
.|+|+.+...
T Consensus 95 fD~v~~~~~l 104 (281)
T d2gh1a1 95 YDIAICHAFL 104 (281)
T ss_dssp EEEEEEESCG
T ss_pred ceEEEEehhh
Confidence 7887776543
|
| >d1ydhb_ c.129.1.1 (B:) Hypothetical protein At5g11950 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MCP/YpsA-like superfamily: MCP/YpsA-like family: MoCo carrier protein-like domain: Hypothetical protein At5g11950 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.98 E-value=4.8 Score=27.02 Aligned_cols=23 Identities=13% Similarity=-0.041 Sum_probs=13.2
Q ss_pred ccEEEEcCCCCCCCCCCCCCHHHHHHHHHH
Q 028868 79 LNILINNAAIAFVKPTVDITAEDMSTVSST 108 (202)
Q Consensus 79 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~ 108 (202)
=|.+|.-+|... |.+++-+++..
T Consensus 99 sdafIvlPGG~G-------TLdEl~e~l~l 121 (181)
T d1ydhb_ 99 AEAFIALPGGYG-------TMEELLEMITW 121 (181)
T ss_dssp CSEEEECSCSHH-------HHHHHHHHHHH
T ss_pred CeeEEEeCCccc-------hHHHHHHHHHH
Confidence 378888787643 44555444443
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=81.91 E-value=0.75 Score=34.40 Aligned_cols=29 Identities=17% Similarity=0.047 Sum_probs=25.6
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSR 32 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r 32 (202)
|||+|+ |.-|..+|.+|++.|.+|+++-+
T Consensus 5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEa 33 (367)
T d1n4wa1 5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEM 33 (367)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEeCc-CHHHHHHHHHHHHCcCeEEEEec
Confidence 677776 78899999999999999999876
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=81.87 E-value=1.3 Score=29.06 Aligned_cols=32 Identities=13% Similarity=0.019 Sum_probs=24.9
Q ss_pred CEEEEecCCCchHHHHHHHHHHCC----CEEEEEeC
Q 028868 1 MTALVTGGTRGIGHATVEELARFG----AIVHTCSR 32 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g----~~Vi~~~r 32 (202)
+++-|.||||-.|..+.+.|+++. ..+...+.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss 36 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST 36 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecc
Confidence 578999999999999999988754 25554443
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=81.79 E-value=0.61 Score=34.72 Aligned_cols=29 Identities=24% Similarity=0.276 Sum_probs=25.0
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeC
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSR 32 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r 32 (202)
++|+|+ |-=|..+|.+|++.|.+|+++-+
T Consensus 7 viIVGs-G~aG~v~A~~La~~G~kVlvLEa 35 (379)
T d2f5va1 7 VVIVGS-GPIGCTYARELVGAGYKVAMFDI 35 (379)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEECc-CHHHHHHHHHHhhCCCeEEEEec
Confidence 678877 56699999999999999999865
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=81.78 E-value=2.6 Score=29.43 Aligned_cols=77 Identities=12% Similarity=-0.020 Sum_probs=54.3
Q ss_pred EEEEecCCCchHHHHHHHHHH-CC----CEEEEEeCChhHHHHHHHHHHhc------CCeEEEEEecCCCHHHHHHHHHH
Q 028868 2 TALVTGGTRGIGHATVEELAR-FG----AIVHTCSRNQIELDARLHEWKNK------GFKVTGSVCDLSSREQREKLIET 70 (202)
Q Consensus 2 ~~lItGas~giG~a~a~~l~~-~g----~~Vi~~~r~~~~~~~~~~~~~~~------~~~v~~~~~Dv~~~~~i~~~~~~ 70 (202)
+||.+|+.+|--.++.-+++. .| .+|+.+.++++..+.+.+.+... ..++.++..|..+.
T Consensus 83 ~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~--------- 153 (223)
T d1r18a_ 83 RILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG--------- 153 (223)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC---------
T ss_pred eEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc---------
Confidence 689999999988888777774 34 48999999987776665543221 24688888887541
Q ss_pred HHHHhCCCccEEEEcCCCC
Q 028868 71 VTSIFQGKLNILINNAAIA 89 (202)
Q Consensus 71 ~~~~~~~~id~vi~~ag~~ 89 (202)
.. . .++.|.++.+++..
T Consensus 154 ~~-~-~~~fD~Iiv~~a~~ 170 (223)
T d1r18a_ 154 YP-P-NAPYNAIHVGAAAP 170 (223)
T ss_dssp CG-G-GCSEEEEEECSCBS
T ss_pred cc-c-ccceeeEEEEeech
Confidence 11 1 15799999988853
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.38 E-value=4.1 Score=29.94 Aligned_cols=71 Identities=20% Similarity=0.085 Sum_probs=46.4
Q ss_pred CEEEEecCCCchHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhc--CCeEEEEEecCCCHHHHHHHHHHHHHHhCC
Q 028868 1 MTALVTGGTRGIGHATVEELARFGA-IVHTCSRNQIELDARLHEWKNK--GFKVTGSVCDLSSREQREKLIETVTSIFQG 77 (202)
Q Consensus 1 k~~lItGas~giG~a~a~~l~~~g~-~Vi~~~r~~~~~~~~~~~~~~~--~~~v~~~~~Dv~~~~~i~~~~~~~~~~~~~ 77 (202)
|+||-.|++.|+ ++..++++|+ +|++++.++ ....+.+..... ..++.++..|+.+.. .-..
T Consensus 40 ~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~-----------~~~~ 104 (328)
T d1g6q1_ 40 KIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVH-----------LPFP 104 (328)
T ss_dssp CEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC-----------CSSS
T ss_pred CEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhcc-----------Cccc
Confidence 578999998774 4556778887 788988775 333444433332 456888888887631 0014
Q ss_pred CccEEEEcC
Q 028868 78 KLNILINNA 86 (202)
Q Consensus 78 ~id~vi~~a 86 (202)
+.|+++...
T Consensus 105 ~~D~i~se~ 113 (328)
T d1g6q1_ 105 KVDIIISEW 113 (328)
T ss_dssp CEEEEEECC
T ss_pred ceeEEEEEe
Confidence 688888754
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=81.37 E-value=0.91 Score=31.08 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=26.8
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
++|+|| |..|...|..+++.|.+|+++.+..
T Consensus 6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~~ 36 (223)
T d1ebda1 6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN 36 (223)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence 688887 6779999999999999999997753
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=80.40 E-value=1 Score=31.24 Aligned_cols=31 Identities=26% Similarity=0.214 Sum_probs=27.3
Q ss_pred EEEecCCCchHHHHHHHHHHCCCEEEEEeCCh
Q 028868 3 ALVTGGTRGIGHATVEELARFGAIVHTCSRNQ 34 (202)
Q Consensus 3 ~lItGas~giG~a~a~~l~~~g~~Vi~~~r~~ 34 (202)
++|+|| |.-|...|.++++.|.+|+++.+.+
T Consensus 9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence 678887 6889999999999999999998754
|