Query 028871
Match_columns 202
No_of_seqs 202 out of 872
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 05:42:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028871.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028871hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qlv_B Protein SIP2, protein S 100.0 5.1E-64 1.7E-68 432.5 17.6 183 16-200 2-252 (252)
2 2v8q_B 5'-AMP-activated protei 100.0 1.9E-37 6.6E-42 226.2 7.0 81 118-200 2-87 (87)
3 2qrd_B SPCC1919.03C protein; A 100.0 1.3E-36 4.5E-41 225.7 7.4 85 115-201 2-96 (97)
4 3t4n_B SNF1 protein kinase sub 100.0 9.4E-35 3.2E-39 220.8 1.3 70 131-202 35-112 (113)
5 1z0n_A 5'-AMP-activated protei 100.0 4.3E-28 1.5E-32 180.4 11.6 93 10-103 3-95 (96)
6 3nme_A Ptpkis1 protein, SEX4 g 99.9 2.7E-24 9.2E-29 187.9 10.8 84 15-98 167-254 (294)
7 4aee_A Alpha amylase, catalyti 99.6 2.5E-16 8.5E-21 150.9 8.7 81 14-94 14-102 (696)
8 4aef_A Neopullulanase (alpha-a 99.3 7.1E-12 2.4E-16 118.8 10.7 66 17-82 16-82 (645)
9 2z0b_A GDE5, KIAA1434, putativ 98.6 2.3E-07 8E-12 71.9 8.8 56 15-70 6-75 (131)
10 1ac0_A Glucoamylase; hydrolase 98.2 1.3E-06 4.6E-11 64.9 5.4 57 15-71 4-74 (108)
11 3c8d_A Enterochelin esterase; 98.2 5E-06 1.7E-10 74.3 8.7 85 16-101 29-154 (403)
12 1m7x_A 1,4-alpha-glucan branch 97.7 0.00014 4.8E-09 68.6 9.4 65 19-84 26-100 (617)
13 3k1d_A 1,4-alpha-glucan-branch 97.6 0.00013 4.3E-09 70.7 8.0 64 19-83 137-210 (722)
14 3aml_A OS06G0726400 protein; s 97.6 0.00014 4.7E-09 70.6 7.9 61 20-81 67-142 (755)
15 2laa_A Beta/alpha-amylase; SBD 96.9 0.0044 1.5E-07 46.2 8.2 63 18-81 5-76 (104)
16 3vgf_A Malto-oligosyltrehalose 96.8 0.0018 6E-08 60.4 6.2 60 19-82 10-73 (558)
17 2vn4_A Glucoamylase; hydrolase 96.8 0.0064 2.2E-07 57.6 10.0 57 14-70 493-563 (599)
18 1bf2_A Isoamylase; hydrolase, 96.5 0.0024 8.1E-08 61.7 5.3 54 20-74 18-85 (750)
19 2bhu_A Maltooligosyltrehalose 96.5 0.0063 2.2E-07 57.3 8.0 60 19-83 35-96 (602)
20 1wzl_A Alpha-amylase II; pullu 96.4 0.0078 2.7E-07 56.2 7.7 57 15-71 20-87 (585)
21 2wsk_A Glycogen debranching en 96.4 0.0081 2.8E-07 57.1 7.9 52 20-73 21-77 (657)
22 2vr5_A Glycogen operon protein 96.3 0.0099 3.4E-07 57.1 8.2 53 20-74 31-91 (718)
23 1cyg_A Cyclodextrin glucanotra 96.2 0.014 4.9E-07 55.4 8.7 56 15-70 577-647 (680)
24 1qho_A Alpha-amylase; glycosid 96.1 0.013 4.5E-07 55.7 7.7 56 15-70 579-653 (686)
25 3bmv_A Cyclomaltodextrin gluca 96.0 0.014 5E-07 55.4 7.7 57 15-71 581-652 (683)
26 1j0h_A Neopullulanase; beta-al 96.0 0.011 3.7E-07 55.2 6.6 58 14-71 19-89 (588)
27 1d3c_A Cyclodextrin glycosyltr 95.8 0.019 6.6E-07 54.5 7.7 56 15-70 584-654 (686)
28 2e8y_A AMYX protein, pullulana 95.6 0.025 8.6E-07 54.2 7.6 63 19-82 114-184 (718)
29 1vem_A Beta-amylase; beta-alph 95.3 0.042 1.5E-06 51.0 7.7 56 15-70 417-485 (516)
30 2fhf_A Pullulanase; multiple d 95.3 0.03 1E-06 56.4 7.2 63 20-83 306-384 (1083)
31 4aio_A Limit dextrinase; hydro 95.1 0.034 1.2E-06 53.4 6.8 52 20-72 138-194 (884)
32 3m07_A Putative alpha amylase; 95.1 0.058 2E-06 51.0 8.1 60 20-84 44-107 (618)
33 3faw_A Reticulocyte binding pr 94.9 0.027 9.2E-07 55.6 5.6 63 20-82 146-223 (877)
34 1ea9_C Cyclomaltodextrinase; h 94.8 0.017 5.8E-07 53.9 3.8 57 15-71 20-86 (583)
35 2ya0_A Putative alkaline amylo 94.5 0.096 3.3E-06 50.1 8.2 63 20-82 26-105 (714)
36 1ji1_A Alpha-amylase I; beta/a 94.4 0.039 1.3E-06 51.9 5.0 54 19-72 31-96 (637)
37 2wan_A Pullulanase; hydrolase, 94.3 0.08 2.7E-06 52.3 7.2 61 20-82 327-398 (921)
38 1gcy_A Glucan 1,4-alpha-maltot 93.1 0.017 5.9E-07 53.1 0.0 56 15-70 428-495 (527)
39 2ya1_A Putative alkaline amylo 92.4 0.22 7.5E-06 49.7 6.9 62 20-81 333-411 (1014)
40 2wan_A Pullulanase; hydrolase, 90.8 0.56 1.9E-05 46.3 7.8 59 17-75 152-221 (921)
41 2c3v_A Alpha-amylase G-6; carb 88.2 1.5 5.3E-05 32.1 6.7 61 18-79 10-79 (102)
42 4fch_A Outer membrane protein 82.0 1.4 4.9E-05 35.8 4.4 48 27-75 11-63 (221)
43 2jnz_A PHL P 3 allergen; timot 79.3 6.6 0.00023 29.0 6.8 65 10-77 20-90 (108)
44 2djm_A Glucoamylase A; beta sa 60.5 27 0.00092 25.5 6.5 58 16-73 19-91 (106)
45 3ft1_A PHL P 3 allergen; beta- 60.0 21 0.00072 25.8 5.7 60 15-77 14-79 (100)
46 2eef_A Protein phosphatase 1, 59.1 35 0.0012 26.6 7.3 58 16-73 46-122 (156)
47 4fe9_A Outer membrane protein 57.1 17 0.00058 32.4 5.8 42 29-71 151-197 (470)
48 1yua_A Topoisomerase I; gene-r 56.6 11 0.00038 28.2 3.7 26 12-37 76-101 (122)
49 2fqm_A Phosphoprotein, P prote 52.3 12 0.00041 25.6 3.0 27 35-62 1-27 (75)
50 4dny_A Metalloprotease STCE; m 50.0 17 0.00058 27.6 3.9 24 56-80 99-123 (126)
51 2r9f_A Calpain-1 catalytic sub 44.4 11 0.00038 32.7 2.4 24 60-83 120-146 (339)
52 2vzp_A Aocbm35, EXO-beta-D-glu 43.7 18 0.0006 26.2 3.1 17 55-71 98-114 (127)
53 2nqa_A Calpain 8; calpain, cal 40.9 10 0.00034 32.8 1.6 24 60-83 115-141 (326)
54 2w47_A Lipolytic enzyme, G-D-S 40.8 17 0.00059 27.1 2.7 18 55-72 99-116 (144)
55 4aef_A Neopullulanase (alpha-a 40.5 43 0.0015 31.1 5.9 48 18-70 125-178 (645)
56 1mhx_A Immunoglobulin-binding 40.5 10 0.00035 25.0 1.2 13 70-82 48-60 (65)
57 1ziv_A Calpain 9; cysteine pro 37.3 13 0.00043 32.4 1.6 24 60-83 119-145 (339)
58 1uy4_A Endo-1,4-beta-xylanase 36.6 22 0.00074 26.9 2.7 19 55-73 115-133 (145)
59 4fe9_A Outer membrane protein 36.4 17 0.00059 32.3 2.5 50 28-78 260-319 (470)
60 1igd_A Protein G; immunoglobul 35.2 14 0.0005 24.3 1.2 13 70-82 44-56 (61)
61 1uxx_X Xylanase U; carbohydrat 34.1 14 0.00048 27.4 1.2 20 55-74 100-119 (133)
62 3fil_A Immunoglobulin G-bindin 33.4 10 0.00035 24.5 0.3 13 70-82 39-51 (56)
63 2w3j_A Carbohydrate binding mo 32.6 28 0.00095 26.2 2.7 19 54-72 96-114 (145)
64 4a02_A EFCBM33A, CBM33, chitin 32.2 1.5E+02 0.0052 23.1 7.0 69 19-97 75-164 (166)
65 2w87_A Esterase D, XYL-CBM35; 31.6 35 0.0012 25.4 3.1 19 54-72 98-116 (139)
66 1uxz_A Cellulase B; carbohydra 29.8 16 0.00056 26.9 0.9 17 55-71 100-116 (131)
67 2khu_A Immunoglobulin G-bindin 28.9 12 0.00041 27.4 0.0 13 70-82 39-51 (108)
68 1od3_A Putative xylanase; hydr 28.8 34 0.0012 26.5 2.7 19 55-73 137-155 (168)
69 2rpv_A Immunoglobulin G-bindin 27.4 23 0.00077 24.2 1.2 13 70-82 58-70 (75)
70 4gln_D D-RFX001; heterochiral 27.3 23 0.00079 22.9 1.2 16 67-82 35-51 (56)
71 4aee_A Alpha amylase, catalyti 27.0 1E+02 0.0034 28.9 6.1 53 17-72 133-188 (696)
72 2bem_A CBP21; chitin-binding p 26.9 2.1E+02 0.0072 22.3 7.1 69 19-97 76-167 (170)
73 1w9s_A BH0236 protein, BHCBM6; 26.7 25 0.00084 26.2 1.5 19 55-73 107-125 (142)
74 3d30_A YOAJ, expansin like pro 26.0 2.2E+02 0.0076 22.6 7.2 43 29-75 139-182 (208)
75 1qxp_A MU-like calpain; M-calp 25.2 42 0.0014 32.4 3.2 24 60-83 135-161 (900)
76 4fem_A Outer membrane protein 25.1 74 0.0025 27.1 4.5 48 28-76 149-201 (358)
77 1bmw_A PHL P II, pollen allerg 24.2 14 0.00048 26.5 -0.3 61 15-79 14-80 (96)
78 4fch_A Outer membrane protein 23.9 40 0.0014 27.0 2.4 46 29-74 117-169 (221)
79 3bwu_D FIMD, outer membrane us 23.6 56 0.0019 23.7 2.9 21 58-78 27-47 (125)
80 1xbr_A Protein (T protein); co 22.8 44 0.0015 26.6 2.3 28 51-79 46-74 (184)
81 2jox_A Churchill protein; zinc 21.7 48 0.0016 24.2 2.1 12 62-73 68-79 (106)
No 1
>2qlv_B Protein SIP2, protein SPM2; heterotrimer, ATP-binding, carbohydrate metabolism, kinase, membrane, nucleotide-binding, nucleus; 2.60A {Saccharomyces cerevisiae} SCOP: b.1.18.21 d.353.1.1
Probab=100.00 E-value=5.1e-64 Score=432.46 Aligned_cols=183 Identities=28% Similarity=0.471 Sum_probs=129.5
Q ss_pred CceeEEEEEcCCCceEEEEecCCCCcccceeeec---CCcEEEEEEcCCceEEEEEEEcCeeecCCCCCeeeCCCCCeee
Q 028871 16 KGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRS---GKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADELGGVCN 92 (202)
Q Consensus 16 ~~vpv~f~w~~~g~~V~V~GsF~nW~~~~~m~k~---~~~f~~~l~Lp~G~y~YKFiVDG~w~~dp~~p~~~d~~G~~nN 92 (202)
..+||+|+|.++|++|+|+|+|++|++.++|.|+ +|.|++++.|++|.|+|||+|||+|++|+++|++.|+.|+.||
T Consensus 2 ~~vpv~f~W~~~a~~V~V~GsF~~W~~~~~m~k~~~~~G~f~~tv~LppG~y~YKFiVDG~w~~Dp~~p~~~d~~G~~nN 81 (252)
T 2qlv_B 2 LMVPVEIRWQQGGSKVYVTGSFTKWRKMIGLIPDSDNNGSFHVKLRLLPGTHRFRFIVDNELRVSDFLPTATDQMGNFVN 81 (252)
T ss_dssp CCEEEEEEECSCCSCEEEEEGGGTTSSCEECEECSSSTTCEEEEEEECSEEEEEEEEETTEEECCTTSCEEBCSSCCCEE
T ss_pred CcEEEEEEEeCCCcEEEEEEEeCCCcCcccceeccCCCCcEEEEEECCCCEEEEEEEECCEEEeCCCCCEEecCCCcCcc
Confidence 4689999999999999999999999988999984 3589999999999999999999999999999999999999999
Q ss_pred eEEeccCchhh------------------cc----------------ccccc--cCCCCCCCCCccCCCCC-------Cc
Q 028871 93 LLDVHSCVPEI------------------LD----------------SVAEF--EAPASPESSYSQALPSE-------ED 129 (202)
Q Consensus 93 vl~V~~~~p~~------------------~~----------------~~~~~--~~~~s~~~~y~~~~p~~-------~~ 129 (202)
+|+|.+.++.. .. +.+++ +++.+|.++|+|+||.. |+
T Consensus 82 vi~V~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~y~~eiP~~~~~~~~~e~ 161 (252)
T 2qlv_B 82 YIEVRQPEKNPTNEKIRSKEADSMRPPTSDRSSIALQIGKDPDDFGDGYTRFHEDLSPRPPLEYTTDIPAVFTDPSVMER 161 (252)
T ss_dssp EEEECC----------------------------------------------------------CCCCCGGGTCHHHHHH
T ss_pred eeeccCccccccccccccccccccccccccccccccccccCccccccccccccccCCCCCcccccccCCchhcccchhhh
Confidence 99998743111 00 01111 45678899999999974 22
Q ss_pred --------------cCCCCCCCChhcccccCCCCCC--------CCCCCCCCCeEeeceeEeecccccCceEEEeeeeEe
Q 028871 130 --------------YAKEPLTVPSQLHLTLLGTENS--------DEASSSKPKHVVLNHVFVDDGWKSKSVVALGLTHRF 187 (202)
Q Consensus 130 --------------~~~~PP~lP~~L~~~iLN~~~~--------d~~~Lp~P~Hv~lNHLy~~s~~~~~~v~~~~~T~Ry 187 (202)
..++||+|||||+++|||+.+. |+++||+|||||||||||+|| |+|||||||||||
T Consensus 162 ~~~~~d~~~~~~~~~~~~PP~LPphL~~~iLN~~~~~~~~~~~~~~~~Lp~PnHVvLNHL~~~sI--k~~vlal~~T~RY 239 (252)
T 2qlv_B 162 YYYTLDRQQSNTDTSWLTPPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSI--KHNTLCVASIVRY 239 (252)
T ss_dssp HHHHHCC-----------CCCCCCC----------------------------CCSCCBCEECCC--CSSEEEEEEEEEE
T ss_pred hhhcccccccccccccCCCCCCChhhcchhcCCCCccccccccCCcccCCCCCEEEeeeEEEecc--cCCEEEEeeeeee
Confidence 2389999999999999999653 588999999999999999998 7999999999999
Q ss_pred cceeEEEEEeeec
Q 028871 188 QSKYVTVVLYKPH 200 (202)
Q Consensus 188 ~~KyvT~vlYkp~ 200 (202)
|+|||||||||||
T Consensus 240 k~KyVTtvlYkP~ 252 (252)
T 2qlv_B 240 KQKYVTQILYTPI 252 (252)
T ss_dssp TTEEEEEEEEEEC
T ss_pred cceeEEEEEEeeC
Confidence 9999999999997
No 2
>2v8q_B 5'-AMP-activated protein kinase subunit beta-2; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Homo sapiens} SCOP: d.353.1.1 PDB: 2v92_B* 2v9j_B* 2y8l_B* 2y8q_B* 2y94_B* 2ya3_B*
Probab=100.00 E-value=1.9e-37 Score=226.22 Aligned_cols=81 Identities=37% Similarity=0.627 Sum_probs=67.0
Q ss_pred CCCccCCCC--CCccCCCCCCCChhcccccCCCCCC---CCCCCCCCCeEeeceeEeecccccCceEEEeeeeEecceeE
Q 028871 118 SSYSQALPS--EEDYAKEPLTVPSQLHLTLLGTENS---DEASSSKPKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYV 192 (202)
Q Consensus 118 ~~y~~~~p~--~~~~~~~PP~lP~~L~~~iLN~~~~---d~~~Lp~P~Hv~lNHLy~~s~~~~~~v~~~~~T~Ry~~Kyv 192 (202)
++|+|++|. .+||+++||.|||||+++|||.+++ |++.||+|+||||||||++|| |++|+|+|+|||||+|||
T Consensus 2 ~~y~q~~~~~~~~~~~k~PP~LPphL~~~iLN~~~~~~~d~~~lp~P~HVvLNHLy~~si--k~~v~alg~T~Ry~~KyV 79 (87)
T 2v8q_B 2 GPYGQEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSI--KDSVMVLSATHRYKKKYV 79 (87)
T ss_dssp ---CCCCCCCCCCCSSSSCCBSCSSCCSEEECCCCC----------CCTTCTTBCEECCC--BTTEEEEEEEEEETTEEE
T ss_pred CcccccCCCCCccccccCCCCCChhhceeccCCCCCCCCCcccCCCCCEEEeeeEEEecc--cCCeEEEeeeeeecceeE
Confidence 579999875 4889999999999999999999765 799999999999999999998 699999999999999999
Q ss_pred EEEEeeec
Q 028871 193 TVVLYKPH 200 (202)
Q Consensus 193 T~vlYkp~ 200 (202)
|+|||||+
T Consensus 80 T~vlYkP~ 87 (87)
T 2v8q_B 80 TTLLYKPI 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEeeC
Confidence 99999996
No 3
>2qrd_B SPCC1919.03C protein; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} SCOP: d.353.1.1 PDB: 2ooy_B* 2qr1_B* 2qrc_B* 2oox_B* 2qre_B*
Probab=100.00 E-value=1.3e-36 Score=225.73 Aligned_cols=85 Identities=29% Similarity=0.532 Sum_probs=77.1
Q ss_pred CCCCCCccCCCCCC-----c--cCCCCCCCChhcccccCCCCCC---CCCCCCCCCeEeeceeEeecccccCceEEEeee
Q 028871 115 SPESSYSQALPSEE-----D--YAKEPLTVPSQLHLTLLGTENS---DEASSSKPKHVVLNHVFVDDGWKSKSVVALGLT 184 (202)
Q Consensus 115 s~~~~y~~~~p~~~-----~--~~~~PP~lP~~L~~~iLN~~~~---d~~~Lp~P~Hv~lNHLy~~s~~~~~~v~~~~~T 184 (202)
|+.++|+|+||... + ..++||.||+||+++|||.+++ |++.||+|+||||||||++|| |++|+|+|+|
T Consensus 2 ~~~~~y~~eIP~~~~~~~~~~~~~~~PP~LPphL~~~iLN~~~~~~~d~~~lp~P~HVvLNHLy~~si--k~~vlalg~T 79 (97)
T 2qrd_B 2 SESEQYSTEIPAFLTSNTLQELKLPKPPSLPPHLEKCILNSNTAYKEDQSVLPNPNHVLLNHLAAANT--QLGVLALSAT 79 (97)
T ss_dssp --CCCCBSSCCGGGSCC--CCSCCCCCCBCCGGGSCCGGGCCTTHHHHTTBCCCCCGGGTTBCEEECC--SSSSEEEEEE
T ss_pred CccccccccCChhhhcccccccccCCCCCCChhhcccccCCCCCCCCCcccCCCCCEEEeeeeeeecc--cCCeEEEeee
Confidence 57889999999753 2 5689999999999999999886 799999999999999999998 6999999999
Q ss_pred eEecceeEEEEEeeecC
Q 028871 185 HRFQSKYVTVVLYKPHK 201 (202)
Q Consensus 185 ~Ry~~KyvT~vlYkp~~ 201 (202)
||||+||||+|||||++
T Consensus 80 ~Ry~~KyVT~vlYkP~~ 96 (97)
T 2qrd_B 80 TRYHRKYVTTAMFKNFD 96 (97)
T ss_dssp EEETTEEEEEEEEECCC
T ss_pred eeeeceeEEEEEEecCC
Confidence 99999999999999986
No 4
>3t4n_B SNF1 protein kinase subunit beta-2; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_B* 3te5_B*
Probab=100.00 E-value=9.4e-35 Score=220.76 Aligned_cols=70 Identities=29% Similarity=0.482 Sum_probs=64.7
Q ss_pred CCCCCCCChhcccccCCCCCC--------CCCCCCCCCeEeeceeEeecccccCceEEEeeeeEecceeEEEEEeeecCC
Q 028871 131 AKEPLTVPSQLHLTLLGTENS--------DEASSSKPKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKPHKR 202 (202)
Q Consensus 131 ~~~PP~lP~~L~~~iLN~~~~--------d~~~Lp~P~Hv~lNHLy~~s~~~~~~v~~~~~T~Ry~~KyvT~vlYkp~~~ 202 (202)
+++||.|||||+++|||.++. +++.||+|+||||||||++|| |++|||+|+|||||+||||+|||||++|
T Consensus 35 ~~~PP~LPphL~~~iLN~~~~~~~~~~~d~~~~Lp~P~HVvLNHLy~~si--k~~vlalg~T~RYk~KyVT~VlYKP~q~ 112 (113)
T 3t4n_B 35 WLTPPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSI--KHNTLCVASIVRYKQKYVTQILYTPIES 112 (113)
T ss_dssp GGSCCBCCGGGCHHHHHHHHHHHHHHHHHCCSCCCCCCGGGTTBCEECCC--BTTEEEEEEEEEETTEEEEEEEEEECC-
T ss_pred CCCCCCCChhhcccccCCCccccccccCCCcccCCCCCeEeeeeeeeecc--cCceEEEeeeeeeeceeEEEEEEeeccc
Confidence 579999999999999998642 588999999999999999998 7999999999999999999999999997
No 5
>1z0n_A 5'-AMP-activated protein kinase, beta-1 subunit; beta sandwich, sugar binding protein; HET: BCD; 1.49A {Rattus norvegicus} SCOP: b.1.18.21 PDB: 1z0m_A* 2f15_A
Probab=99.95 E-value=4.3e-28 Score=180.41 Aligned_cols=93 Identities=35% Similarity=0.691 Sum_probs=81.7
Q ss_pred cCCCCCCceeEEEEEcCCCceEEEEecCCCCcccceeeecCCcEEEEEEcCCceEEEEEEEcCeeecCCCCCeeeCCCCC
Q 028871 10 ASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADELGG 89 (202)
Q Consensus 10 ~~~~~~~~vpv~f~w~~~g~~V~V~GsF~nW~~~~~m~k~~~~f~~~l~Lp~G~y~YKFiVDG~w~~dp~~p~~~d~~G~ 89 (202)
.+.+++.+++|+|+|.++|++|+|+|+||+|+ +++|.|+++.|++++.|++|.|+|||+|||+|++||.++++.|+.|+
T Consensus 3 ~~~~~~~~~~v~F~wap~a~~V~v~GdFn~W~-~~~m~~~~g~w~~~v~l~~G~~~YKf~VdG~~~~DP~~~~~~d~~G~ 81 (96)
T 1z0n_A 3 NEKAPAQARPTVFRWTGGGKEVYLSGSFNNWS-KLPMTRSQNNFVAILDLPEGEHQYKFFVDGQWTHDPSEPIVTSQLGT 81 (96)
T ss_dssp -------CEEEEEEECSCCSCEEEEEGGGTTC-CEECEEETTEEEEEEEECSEEEEEEEEETTEEECCTTSCEEECTTSC
T ss_pred cccCCCCceEEEEEECCCCcEEEEEEEeCCCc-cccCEECCCEEEEEEEccCCCEEEEEEECCeEEcCCCCCeEECCCCC
Confidence 45677889999999999999999999999999 78999988899999999999999999999999999999999999999
Q ss_pred eeeeEEeccCchhh
Q 028871 90 VCNLLDVHSCVPEI 103 (202)
Q Consensus 90 ~nNvl~V~~~~p~~ 103 (202)
.||+|+|.+.+++.
T Consensus 82 ~Nnvi~V~~~d~~~ 95 (96)
T 1z0n_A 82 VNNIIQVKKTDFEV 95 (96)
T ss_dssp EEEEEEECSCTTEE
T ss_pred EeEEEEEcCCCcCc
Confidence 99999998776543
No 6
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=99.91 E-value=2.7e-24 Score=187.87 Aligned_cols=84 Identities=26% Similarity=0.391 Sum_probs=78.4
Q ss_pred CCceeEEEEEcC-CCceEEEEecCCCCcccceeee--cCCcEEEEEEcCCceEEEEEEEcCeeecCCCCCee-eCCCCCe
Q 028871 15 EKGVPTIITWNY-GGNEVAVEGSWDNWTSRRILHR--SGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFV-ADELGGV 90 (202)
Q Consensus 15 ~~~vpv~f~w~~-~g~~V~V~GsF~nW~~~~~m~k--~~~~f~~~l~Lp~G~y~YKFiVDG~w~~dp~~p~~-~d~~G~~ 90 (202)
..+.|++|+|.+ +|++|+|+|||+||+.+++|.| +++.|++++.|+||.|+|||+|||+|++||++|.+ .|+.|+.
T Consensus 167 ~~k~~v~f~~~~~~~~~V~v~GsF~~W~~~~~l~k~~~~g~~~~~~~L~~G~y~YkFiVDG~w~~d~~~~~~~~d~~G~~ 246 (294)
T 3nme_A 167 LKRKTVTLTLKDKGFSRVEISGLDIGWGQRIPLTLGKGTGFWILKRELPEGQFEYKYIIDGEWTHNEAEPFIGPNKDGHT 246 (294)
T ss_dssp CCCEEEEEEEECSSCSCEEEEETTTEEEEEEECEECTTTCEEEEEEEECSEEEEEEEEETTEEECCTTSCEECSCTTSCC
T ss_pred cccccceeeeccCCCCEEEEEEeccCCCCcccceEcCCCCEEEEEEECCCceEEEEEEECCEEeeCCCCCeeeECCCCCE
Confidence 356899999997 8899999999999998899999 46799999999999999999999999999999976 7999999
Q ss_pred eeeEEecc
Q 028871 91 CNLLDVHS 98 (202)
Q Consensus 91 nNvl~V~~ 98 (202)
||+|.|.+
T Consensus 247 nn~~~v~~ 254 (294)
T 3nme_A 247 NNYAKVVD 254 (294)
T ss_dssp EEEEEECC
T ss_pred eEEEEECC
Confidence 99999987
No 7
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=99.64 E-value=2.5e-16 Score=150.93 Aligned_cols=81 Identities=17% Similarity=0.181 Sum_probs=71.4
Q ss_pred CCCceeEEEEEcC--CCceEEEEecCCCCcc-cceeeecCCcEEEEEEcCCceEEEEEEEcCeee--cCCCCC---eeeC
Q 028871 14 LEKGVPTIITWNY--GGNEVAVEGSWDNWTS-RRILHRSGKDHSILLVLPSGVYHYKFIVDGDWR--YIPDLP---FVAD 85 (202)
Q Consensus 14 ~~~~vpv~f~w~~--~g~~V~V~GsF~nW~~-~~~m~k~~~~f~~~l~Lp~G~y~YKFiVDG~w~--~dp~~p---~~~d 85 (202)
....++|+|++.. +|++|+|+||||+|++ ..+|.|+++.|++++.||||.|+|||+|||+|. .||++| .+.|
T Consensus 14 ~~~~~~v~f~~~~~~~~~~v~~~G~Fn~w~~~~~~~~~~~~~~~~~~~L~~g~~~y~f~vdg~~~~~~d~~~~~~~y~~~ 93 (696)
T 4aee_A 14 RKGRYIVKFTRHWPQYAKNIYLIGEFTSLYPGFVKLRKIEEQGIVYLKLWPGEYGYGFQIDNDFENVLDPDNEEKKCVHT 93 (696)
T ss_dssp EEEEEEEEEEEECCTTCSCEEEEETTSCSSTTSCBCEEETTEEEEEEEECSEEEEEEEEETTCCSCCCCTTCCCEEEEEC
T ss_pred CCCcEEEEEEEECCCCCcEEEEEEecCCCCCCCcceEecCCeEEEEEEcCCceEEEEEEECCEEeecCCCCCCccccccc
Confidence 4567888888775 7999999999999965 479999999999999999999999999999999 888888 3578
Q ss_pred CCCCeeeeE
Q 028871 86 ELGGVCNLL 94 (202)
Q Consensus 86 ~~G~~nNvl 94 (202)
++|+.|++.
T Consensus 94 ~~g~~n~~~ 102 (696)
T 4aee_A 94 SFFPEYKKC 102 (696)
T ss_dssp SSCTTSEEE
T ss_pred CCcccccee
Confidence 999999984
No 8
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=99.30 E-value=7.1e-12 Score=118.82 Aligned_cols=66 Identities=26% Similarity=0.472 Sum_probs=59.3
Q ss_pred ceeEEEEEcCCCceEEEEecCCCCccc-ceeeecCCcEEEEEEcCCceEEEEEEEcCeeecCCCCCe
Q 028871 17 GVPTIITWNYGGNEVAVEGSWDNWTSR-RILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPF 82 (202)
Q Consensus 17 ~vpv~f~w~~~g~~V~V~GsF~nW~~~-~~m~k~~~~f~~~l~Lp~G~y~YKFiVDG~w~~dp~~p~ 82 (202)
..-|.|.+..+|+.|+|.|+||+|... .+|++.++.|.+++.||||.|+|||+|||+|..||.+|.
T Consensus 16 ~~~~~~~~~~~~~~~yl~G~Fn~w~~~~~~m~~~g~~~~~~v~L~~G~y~Y~f~vdg~~~~dp~n~~ 82 (645)
T 4aef_A 16 VAEVEFSLIREGSYAYLLGDFNAFNEGSFRMEQEGKNWKIKIALPEGVWHYAFSIDGKFVLDPDNPE 82 (645)
T ss_dssp EEEEEEEEECCSSCEEEEETTTTTCTTSSEEEECSSEEEEEEEECSEEEEEEEEETTEEECCTTCCC
T ss_pred EEEEEEecCCCCeEEEEEEcCCCCCCCcccceEcCCEEEEEEEeCCceEEEEEEECCeEecCCCCCC
Confidence 345667788889999999999999863 689999999999999999999999999999999999984
No 9
>2z0b_A GDE5, KIAA1434, putative glycerophosphodiester phosphodiesterase; CBM20 domain, starch-binding, hydrolase, STR genomics, NPPSFA; 2.00A {Homo sapiens}
Probab=98.57 E-value=2.3e-07 Score=71.88 Aligned_cols=56 Identities=21% Similarity=0.313 Sum_probs=47.0
Q ss_pred CCceeEEEEEcC---CCceEEEEec---CCCCccc--ceeeec-----CCcEEEEEEcCCce-EEEEEEE
Q 028871 15 EKGVPTIITWNY---GGNEVAVEGS---WDNWTSR--RILHRS-----GKDHSILLVLPSGV-YHYKFIV 70 (202)
Q Consensus 15 ~~~vpv~f~w~~---~g~~V~V~Gs---F~nW~~~--~~m~k~-----~~~f~~~l~Lp~G~-y~YKFiV 70 (202)
...+.|+|+-.. .|+.|+|+|+ +.+|+.. ++|.+. ...|++.+.||.|. ++|||++
T Consensus 6 ~~~v~V~F~v~~~~~~ge~v~vvGs~~~LG~W~p~~av~L~~~~~~~~~~~W~~~v~lp~~~~~eYKyvi 75 (131)
T 2z0b_A 6 SGPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSRGVSVQYRYFK 75 (131)
T ss_dssp CCCEEEEEEEECCCCTTCEEEEEESSGGGTTTCGGGCEECEECCTTCCSSEEEEEEEECTTCCEEEEEEE
T ss_pred CCeEEEEEEEeeecCCCCEEEEEeCCCcCCCCCccccccccccccCCCCCeEEEEEEcCCCCcEEEEEEE
Confidence 456888888763 5899999999 8999974 689886 34899999999985 9999999
No 10
>1ac0_A Glucoamylase; hydrolase, starch binding domain; HET: GLC BGC GLO; NMR {Aspergillus niger} SCOP: b.3.1.1 PDB: 1acz_A* 1kul_A 1kum_A
Probab=98.23 E-value=1.3e-06 Score=64.94 Aligned_cols=57 Identities=23% Similarity=0.397 Sum_probs=46.1
Q ss_pred CCceeEEEEEcC---CCceEEEEecC---CCCccc--ceeeec-----CCcEEEEEEcCCce-EEEEEEEc
Q 028871 15 EKGVPTIITWNY---GGNEVAVEGSW---DNWTSR--RILHRS-----GKDHSILLVLPSGV-YHYKFIVD 71 (202)
Q Consensus 15 ~~~vpv~f~w~~---~g~~V~V~GsF---~nW~~~--~~m~k~-----~~~f~~~l~Lp~G~-y~YKFiVD 71 (202)
+..+.++|+-.. .|+.|+|+|+. .+|+.. ++|... +..|++.+.||.|. ++|||+|.
T Consensus 4 ~~~v~V~F~v~~~t~~Ge~v~vvGs~~~LG~W~~~~a~~l~~~~~~~~~~~W~~~v~lp~~~~~eYKy~v~ 74 (108)
T 1ac0_A 4 PTAVAVTFDLTATTTYGENIYLVGSISQLGDWETSDGIALSADKYTSSDPLWYVTVTLPAGESFEYKFIRI 74 (108)
T ss_dssp CCCCCEEEEEECCCCSSCCEECCCSSSTTCSSSGGGSCCBBCSSSSSSCSSCEEEECCCSSSCEECCCEEC
T ss_pred CCeEEEEEEEeeECCCCCEEEEEeCcHHHCCCCHHHCccccccccCCcCCeEEEEEEeCCCCeEEEEEEEE
Confidence 456788888763 58999999985 589964 689875 36899999999985 99999993
No 11
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=98.17 E-value=5e-06 Score=74.30 Aligned_cols=85 Identities=20% Similarity=0.130 Sum_probs=64.9
Q ss_pred CceeEEEEEcC-CC-------ceEEEE--ecCC---CCcccceeeec--CCcEEEEEEcCCceE-EEEEEEc--------
Q 028871 16 KGVPTIITWNY-GG-------NEVAVE--GSWD---NWTSRRILHRS--GKDHSILLVLPSGVY-HYKFIVD-------- 71 (202)
Q Consensus 16 ~~vpv~f~w~~-~g-------~~V~V~--GsF~---nW~~~~~m~k~--~~~f~~~l~Lp~G~y-~YKFiVD-------- 71 (202)
....|+|.|.. .| ++|+|. |-.+ +|.+ .+|+|. .+.|+.++.|++|.| .|.|+||
T Consensus 29 ~~~~vtF~~~~p~a~~~~~~~~~V~~~~~~~~d~~~~~~~-~~m~r~~~~~~W~~t~~l~~~~~~~Y~~~~~~~~~~~~~ 107 (403)
T 3c8d_A 29 EMFEVTFWWRDPQGSEEYSTIKRVWVYITGVTDHHQNSQP-QSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIFSA 107 (403)
T ss_dssp SEEEEEEEEECTTCSTTTCCCCEEEEEETTTC-------C-CBCEECTTSSEEEEEEEEETTCEEEEEEEEESCCSTTCC
T ss_pred CcEEEEEEeeCCCcccccCccceEEEECcCCCccccccCc-cccccCCCCCeEEEEEEECCCcEEEEEEEecCccccccc
Confidence 35679999995 45 799998 4333 2222 479993 468999999999999 9999999
Q ss_pred ----------------CeeecCCCCCeeeC-CCCCeeeeEEeccCch
Q 028871 72 ----------------GDWRYIPDLPFVAD-ELGGVCNLLDVHSCVP 101 (202)
Q Consensus 72 ----------------G~w~~dp~~p~~~d-~~G~~nNvl~V~~~~p 101 (202)
|..+.||.+|.... ..|...|++++++..+
T Consensus 108 ~~~~~~~~r~~w~~~~~~~~~DP~n~~~~~~~~~~~~s~~~~p~~~~ 154 (403)
T 3c8d_A 108 PSPDRLELREGWRKLLPQAIADPLNPQSWKGGLGHAVSALEMPQAPL 154 (403)
T ss_dssp C--CHHHHHHHHHHHGGGCBCCTTCSSEECCSSSSCEEEEECTTCCC
T ss_pred ccchHHHHHHHHHHhhcccccCCCCCCCCCCCCCcccccccCCCCCc
Confidence 78889999997654 3488899999987544
No 12
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=97.67 E-value=0.00014 Score=68.59 Aligned_cols=65 Identities=18% Similarity=0.360 Sum_probs=51.2
Q ss_pred eEEEE-EcCCCceEEEEecCCCCcc-cceeee--cCCcEEEEEE-cCCceEEEEEEE---cCee--ecCCCCCeee
Q 028871 19 PTIIT-WNYGGNEVAVEGSWDNWTS-RRILHR--SGKDHSILLV-LPSGVYHYKFIV---DGDW--RYIPDLPFVA 84 (202)
Q Consensus 19 pv~f~-w~~~g~~V~V~GsF~nW~~-~~~m~k--~~~~f~~~l~-Lp~G~y~YKFiV---DG~w--~~dp~~p~~~ 84 (202)
-|.|+ |.+.|++|.|.|+|++|+. .++|.+ +++.|++.+. +.+|. .|+|.| ||.+ ..||-.....
T Consensus 26 gv~F~vwAP~A~~V~L~gdfn~~~~~~~~M~~~~~~GvW~~~v~~~~~g~-~Y~f~i~~~~g~~~~~~DPya~~~~ 100 (617)
T 1m7x_A 26 GTRFSVWAPNARRVSVVGQFNYWDGRRHPMRLRKESGIWELFIPGAHNGQ-LYKYEMIDANGNLRLKSDPYAFEAQ 100 (617)
T ss_dssp EEEEEEECSSCSCEEEEEGGGTSCTTTCBCCCCTTTTEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSEE
T ss_pred cEEEEEECCCCCEEEEEEEeCCCCCceeEeEECCCCCEEEEEEcCCCCCC-EEEEEEEcCCCcEEEecCccceeec
Confidence 46787 8999999999999999975 479986 4578999887 67887 499999 6764 5777665443
No 13
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=97.60 E-value=0.00013 Score=70.69 Aligned_cols=64 Identities=20% Similarity=0.299 Sum_probs=50.1
Q ss_pred eEEEE-EcCCCceEEEEecCCCCcc-cceeeec--CCcEEEEEE-cCCceEEEEEEE---cCee--ecCCCCCee
Q 028871 19 PTIIT-WNYGGNEVAVEGSWDNWTS-RRILHRS--GKDHSILLV-LPSGVYHYKFIV---DGDW--RYIPDLPFV 83 (202)
Q Consensus 19 pv~f~-w~~~g~~V~V~GsF~nW~~-~~~m~k~--~~~f~~~l~-Lp~G~y~YKFiV---DG~w--~~dp~~p~~ 83 (202)
-|.|+ |.+.|++|.|.|+||+|+. .++|.+. .+.|++.+. +.+|. .|||.| ||++ +.||-...+
T Consensus 137 g~~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~~~GvW~~~i~~~~~g~-~Y~y~i~~~~g~~~~~~DPya~~~ 210 (722)
T 3k1d_A 137 GVSFAVWAPNAKGVSLIGEFNGWNGHEAPMRVLGPSGVWELFWPDFPCDG-LYKFRVHGADGVVTDRADPFAFGT 210 (722)
T ss_dssp EEEEEEECTTCSEEEEEEGGGTTCCCSCBCEECGGGCEEEEEEETCCTTC-EEEEEEECTTSCEEEECCTTCSSB
T ss_pred eEEEEEECCCCCEEEEEeecCCCCCCcccCEEcCCCCEEEEEeCCCCCCC-EEEEEEEcCCCcEEEeecccceee
Confidence 35677 9999999999999999986 4699874 478999886 78885 588888 4654 677766543
No 14
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=97.57 E-value=0.00014 Score=70.63 Aligned_cols=61 Identities=23% Similarity=0.459 Sum_probs=48.0
Q ss_pred EEEE-EcCCCceEEEEecCCCCcc-cceeeecC-CcEEEEEE-------cCCceEEEEEEEcC---ee--ecCCCCC
Q 028871 20 TIIT-WNYGGNEVAVEGSWDNWTS-RRILHRSG-KDHSILLV-------LPSGVYHYKFIVDG---DW--RYIPDLP 81 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~GsF~nW~~-~~~m~k~~-~~f~~~l~-------Lp~G~y~YKFiVDG---~w--~~dp~~p 81 (202)
|.|+ |.+.|++|+|.|+|++|+. .++|.+.+ +.|++.+. +.+|.+ |||.|+| .| +.||-..
T Consensus 67 v~F~vwAP~A~~V~l~gdfn~w~~~~~~m~~~~~GvW~~~v~~~~g~~~i~~g~~-Y~y~i~~~~g~~~~~~dpya~ 142 (755)
T 3aml_A 67 TIYREWAPAAQEAQLIGEFNNWNGAKHKMEKDKFGIWSIKISHVNGKPAIPHNSK-VKFRFRHGGGAWVDRIPAWIR 142 (755)
T ss_dssp EEEEEECTTCSEEEEEEGGGTTCCTTCBCEECTTSEEEEEEECBTTBCSSCTTEE-EEEEEECTTCCCEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEecCCCCCceeeceeCCCCEEEEEEcccccccCCCCCCE-EEEEEECCCCcEEecCCcchh
Confidence 6676 9999999999999999975 47999864 68999888 678874 8888864 55 3466444
No 15
>2laa_A Beta/alpha-amylase; SBD, CBM25, hydrolase; NMR {Paenibacillus polymyxa} PDB: 2lab_A
Probab=96.91 E-value=0.0044 Score=46.15 Aligned_cols=63 Identities=17% Similarity=0.202 Sum_probs=49.4
Q ss_pred eeEEEEEcCCCceEEEEecCC--CCccc--ceeeecC-CcE-EEEEEcCCc-eEEEEEEEcC--eeecCCCCC
Q 028871 18 VPTIITWNYGGNEVAVEGSWD--NWTSR--RILHRSG-KDH-SILLVLPSG-VYHYKFIVDG--DWRYIPDLP 81 (202)
Q Consensus 18 vpv~f~w~~~g~~V~V~GsF~--nW~~~--~~m~k~~-~~f-~~~l~Lp~G-~y~YKFiVDG--~w~~dp~~p 81 (202)
-.++|.|+.+.++|+|-..+. +|... ++|.+.. ..| .++|.|+.| .++|+|. || .|-.+...-
T Consensus 5 ~~vtiyY~~g~~~vylHyg~~~g~Wt~~~~v~M~~~~~~gw~~~TI~l~~g~~~~~~F~-dG~~~WDNn~g~N 76 (104)
T 2laa_A 5 NKVTIYYKKGFNSPYIHYRPAGGSWTAAPGVKMQDAEISGYAKITVDIGSASQLEAAFN-DGNNNWDSNNTKN 76 (104)
T ss_dssp CEEEEEEECSSSSCEEEEEETTSCCCSSSCEECEEETTTTEEEEEEECTTCSCEEEEEE-CSSSCEESTTTSC
T ss_pred CEEEEEEcCCCCcEEEEEcCCCCCCCcCCccccccccCCCeEEEEEECCCCCEEEEEEe-CCCCcCcCCCCcc
Confidence 356788888999999998884 89874 5898886 578 599999975 6999995 76 587765543
No 16
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=96.77 E-value=0.0018 Score=60.39 Aligned_cols=60 Identities=18% Similarity=0.179 Sum_probs=49.1
Q ss_pred eEEEE-EcCCCceEEEEecCCCCcccceeeec-CCcEEEEEE-cCCceEEEEEEEcCe-eecCCCCCe
Q 028871 19 PTIIT-WNYGGNEVAVEGSWDNWTSRRILHRS-GKDHSILLV-LPSGVYHYKFIVDGD-WRYIPDLPF 82 (202)
Q Consensus 19 pv~f~-w~~~g~~V~V~GsF~nW~~~~~m~k~-~~~f~~~l~-Lp~G~y~YKFiVDG~-w~~dp~~p~ 82 (202)
-|.|+ |.+.|++|.|.|.|+ ..++|.+. ++.|++.+. +.+|. .|+|.|||. ...||....
T Consensus 10 ~~~f~vwap~a~~v~l~~~~~---~~~~m~~~~~g~w~~~~~~~~~g~-~Y~~~~~~~~~~~DP~~~~ 73 (558)
T 3vgf_A 10 EVIFTLWAPYQKSVKLKVLEK---GLYEMERDEKGYFTITLNNVKVRD-RYKYVLDDASEIPDPASRY 73 (558)
T ss_dssp EEEEEEECTTCSCCEEEETTT---EEEECEECTTCEEEEEESSCCTTC-EEEEECTTSCEECCTTCSC
T ss_pred cEEEEEECCCCCEEEEEEecC---ceeecccCCCCEEEEEECCCCCCC-EEEEEEeCCccccCcchhh
Confidence 35677 999999999999987 56899986 468999887 78885 799999986 788886653
No 17
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=96.75 E-value=0.0064 Score=57.55 Aligned_cols=57 Identities=23% Similarity=0.226 Sum_probs=46.4
Q ss_pred CCCceeEEEEEc---CCCceEEEEecCC---CCcc--cceeeecC-----CcEEEEEEcCCce-EEEEEEE
Q 028871 14 LEKGVPTIITWN---YGGNEVAVEGSWD---NWTS--RRILHRSG-----KDHSILLVLPSGV-YHYKFIV 70 (202)
Q Consensus 14 ~~~~vpv~f~w~---~~g~~V~V~GsF~---nW~~--~~~m~k~~-----~~f~~~l~Lp~G~-y~YKFiV 70 (202)
....+.++|+-. ..|+.|+|+|+-. +|+. .++|...+ ..|++.+.||.|. ++|||+|
T Consensus 493 ~~~~v~v~F~v~~~t~~Ge~l~vvGs~~~LG~W~~~~a~~L~~~~~t~~~~~W~~~v~lp~~~~~eYKyvv 563 (599)
T 2vn4_A 493 TPTSVAVTFHELVSTQFGQTVKVAGNAAALGNWSTSAAVALDAVNYADNHPLWIGTVNLEAGDVVEYKYIN 563 (599)
T ss_dssp CCSEEEEEEEEECCCCTTCEEEEEESSGGGTTTCTTTSEECBCTTCBTTBCEEEEEEEEETTCEEEEEEEE
T ss_pred CCCeEEEEEEEeEEcCCCCEEEEEecccCCCCcChhheeecccccCCCCCCcEEEEEEcCCCCcEEEEEEE
Confidence 345577888876 3589999999884 8996 46888765 6899999999885 9999998
No 18
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=96.50 E-value=0.0024 Score=61.74 Aligned_cols=54 Identities=7% Similarity=0.065 Sum_probs=44.0
Q ss_pred EEEE-EcCCCceEEEEecCCCCc-----ccceeeec-CCcEEEEEE-cC------CceEEEEEEEcCee
Q 028871 20 TIIT-WNYGGNEVAVEGSWDNWT-----SRRILHRS-GKDHSILLV-LP------SGVYHYKFIVDGDW 74 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~GsF~nW~-----~~~~m~k~-~~~f~~~l~-Lp------~G~y~YKFiVDG~w 74 (202)
|.|+ |.+.|++|.|.+ |++|. ..++|.+. ++.|++.+. +. +|.|.|+|.|+|.|
T Consensus 18 ~~F~vwap~A~~V~l~l-~~~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~~~~~~g~y~Y~y~v~g~~ 85 (750)
T 1bf2_A 18 ITFRVYSSQATRIVLYL-YSAGYGVQESATYTLSPAGSGVWAVTVPVSSIKAAGITGAVYYGYRAWGPN 85 (750)
T ss_dssp EEEEEECSSCSEEEEEE-ESSSSSCCCSEEEECEECSTTEEEEEEEHHHHHHTTCCSCCEEEEEEEBTT
T ss_pred EEEEEECCCCCEEEEEE-EccCCCCccceEEecccCCCCEEEEEECCcccccccCCCCEEEEEEEEeee
Confidence 6676 999999999998 88764 35789875 578999876 66 89999999999853
No 19
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=96.49 E-value=0.0063 Score=57.28 Aligned_cols=60 Identities=23% Similarity=0.299 Sum_probs=48.2
Q ss_pred eEEEE-EcCCCceEEEEecCCCCcccceeeec-CCcEEEEEEcCCceEEEEEEEcCeeecCCCCCee
Q 028871 19 PTIIT-WNYGGNEVAVEGSWDNWTSRRILHRS-GKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFV 83 (202)
Q Consensus 19 pv~f~-w~~~g~~V~V~GsF~nW~~~~~m~k~-~~~f~~~l~Lp~G~y~YKFiVDG~w~~dp~~p~~ 83 (202)
-|.|+ |.+.+++|.|.|+ . ..++|.+. ++.|++.+.+.+|.+ |+|.|||....||.....
T Consensus 35 ~~~f~vwap~a~~v~l~~~---~-~~~~m~~~~~g~w~~~~~~~~g~~-Y~~~v~g~~~~DPya~~~ 96 (602)
T 2bhu_A 35 GTRFRLWTSTARTVAVRVN---G-TEHVMTSLGGGIYELELPVGPGAR-YLFVLDGVPTPDPYARFL 96 (602)
T ss_dssp CEEEEEECSSCSSEEEEET---T-EEEECEEEETTEEEEEESCCTTCE-EEEEETTEEECCTTCSCC
T ss_pred eEEEEEECCCCCEEEEEEc---C-CEEeCeeCCCcEEEEEEECCCCcE-EEEEECCeEecCCCcccc
Confidence 46676 9999999999994 2 45899985 578999988888985 999999977778876544
No 20
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=96.36 E-value=0.0078 Score=56.15 Aligned_cols=57 Identities=12% Similarity=0.090 Sum_probs=45.2
Q ss_pred CCceeEEEE-EcCCCceEEE-EecCCCCcc----cceeeecC--C---cEEEEEEcCCceEEEEEEEc
Q 028871 15 EKGVPTIIT-WNYGGNEVAV-EGSWDNWTS----RRILHRSG--K---DHSILLVLPSGVYHYKFIVD 71 (202)
Q Consensus 15 ~~~vpv~f~-w~~~g~~V~V-~GsF~nW~~----~~~m~k~~--~---~f~~~l~Lp~G~y~YKFiVD 71 (202)
...+.+.|+ |.+.+++|.| .|+|++|.. .++|.+.+ + .|++.+........|||.|.
T Consensus 20 ~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~m~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 87 (585)
T 1wzl_A 20 ETQLRVRLRAKKGDVVRCEVLYADRYASPEEELAHALAGKAGSDERFDYFEALLECSTKRVKYVFLLT 87 (585)
T ss_dssp TTEEEEEEEEETTTCSEEEEEEECTTCCTTSCCEEEECEEEEECSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCEEEEEEEECCCCccEEEEEECCCcCCCCCceEEEEEEEeecCCCEEEEEEEEECCCCeEEEEEEEE
Confidence 455666665 7789999999 799999964 57998742 3 59999988777789999985
No 21
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=96.36 E-value=0.0081 Score=57.07 Aligned_cols=52 Identities=23% Similarity=0.211 Sum_probs=42.2
Q ss_pred EEEE-EcCCCceEEEEecCCCCc--ccceeee-cCCcEEEEEE-cCCceEEEEEEEcCe
Q 028871 20 TIIT-WNYGGNEVAVEGSWDNWT--SRRILHR-SGKDHSILLV-LPSGVYHYKFIVDGD 73 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~GsF~nW~--~~~~m~k-~~~~f~~~l~-Lp~G~y~YKFiVDG~ 73 (202)
|.|+ |.+.|++|.|.+ |+++. ..++|.+ .++.|.+.+. +.+|.+ |+|.|+|.
T Consensus 21 ~~F~vwap~A~~V~l~~-f~~~~~~~~~~m~~~~~g~w~~~v~~~~~g~~-Y~y~v~~~ 77 (657)
T 2wsk_A 21 VNFTLFSAHAERVELCV-FDANGQEHRYDLPGHSGDIWHGYLPDARPGLR-YGYRVHGP 77 (657)
T ss_dssp EEEEEECSSCSEEEEEE-ECTTCCEEEEECCEEETTEEEEEEETCCTTCE-EEEEEECC
T ss_pred EEEEEECCCCCEEEEEE-ECCCCCEEEEeCcCCCCCEEEEEECCCCCCCE-EEEEEeee
Confidence 6777 999999999999 88764 3578975 5679999875 778886 99999984
No 22
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=96.29 E-value=0.0099 Score=57.13 Aligned_cols=53 Identities=13% Similarity=0.211 Sum_probs=42.3
Q ss_pred EEEE-EcCCCceEEEEecCCCCc-----ccceeeec-CCcEEEEEE-cCCceEEEEEEEcCee
Q 028871 20 TIIT-WNYGGNEVAVEGSWDNWT-----SRRILHRS-GKDHSILLV-LPSGVYHYKFIVDGDW 74 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~GsF~nW~-----~~~~m~k~-~~~f~~~l~-Lp~G~y~YKFiVDG~w 74 (202)
|.|+ |.+.|++|.|.+ |+.+. ..++|.+. ++.|.+.+. +.+|.+ |+|.|+|.|
T Consensus 31 ~~F~vwap~A~~V~l~l-f~~~~~~~~~~~~~m~~~~~gvw~~~v~~~~~g~~-Y~y~v~g~~ 91 (718)
T 2vr5_A 31 VNFSLFSENAEKVELLL-YSLTNQKYPKEIIEVKNKTGDIWHVFVPGLRPGQL-YAYRVYGPY 91 (718)
T ss_dssp EEEEEECSSCSEEEEEE-CCSSCCSSCSEEEEECEESSSEEEEEEETCCTTCE-EEEEEECCE
T ss_pred EEEEEECCCCCEEEEEE-EcCCCCCCcceEEeCccCCCCEEEEEeCCCCCCCE-EEEEEeeec
Confidence 6677 899999999999 86543 25789874 578999875 788987 999999853
No 23
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=96.19 E-value=0.014 Score=55.36 Aligned_cols=56 Identities=21% Similarity=0.317 Sum_probs=45.3
Q ss_pred CCceeEEEEEcC----CCceEEEEecCC---CCccc--c-eeee---c-CCcEEEEEEcCCc-eEEEEEEE
Q 028871 15 EKGVPTIITWNY----GGNEVAVEGSWD---NWTSR--R-ILHR---S-GKDHSILLVLPSG-VYHYKFIV 70 (202)
Q Consensus 15 ~~~vpv~f~w~~----~g~~V~V~GsF~---nW~~~--~-~m~k---~-~~~f~~~l~Lp~G-~y~YKFiV 70 (202)
...++|+|+-.. .|+.|+|+|+-. +|+.. + +|.. . ...|++.+.||.| ..+|||++
T Consensus 577 ~~~v~v~f~v~~~~~~~ge~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~v~ 647 (680)
T 1cyg_A 577 NDQVSVRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVYSYPTWYIDVSVPEGKTIEFKFIK 647 (680)
T ss_dssp SCEEEEEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSSCTTCEEEEEEEESSCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCcEEEEEEeCCCCcEEEEEEE
Confidence 357889998763 589999999875 89964 5 6776 4 3589999999988 49999998
No 24
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=96.06 E-value=0.013 Score=55.67 Aligned_cols=56 Identities=20% Similarity=0.443 Sum_probs=45.6
Q ss_pred CCceeEEEEEcC-----CCceEEEEecCC---CCcc--------cc-eeeecC-CcEEEEEEcCCce-EEEEEEE
Q 028871 15 EKGVPTIITWNY-----GGNEVAVEGSWD---NWTS--------RR-ILHRSG-KDHSILLVLPSGV-YHYKFIV 70 (202)
Q Consensus 15 ~~~vpv~f~w~~-----~g~~V~V~GsF~---nW~~--------~~-~m~k~~-~~f~~~l~Lp~G~-y~YKFiV 70 (202)
...+.++|+-.. -|++|+|+|+.. +|+. .+ +|...+ ..|++.+.||.|. .+|||+|
T Consensus 579 ~~~v~v~F~v~~~~t~~~G~~l~v~G~~~~LG~W~~~~~~~~~~a~~~l~~~~~~~W~~~v~l~~~~~~eyKy~~ 653 (686)
T 1qho_A 579 GTQTSVVFTVKSAPPTNLGDKIYLTGNIPELGNWSTDTSGAVNNAQGPLLAPNYPDWFYVFSVPAGKTIQFKFFI 653 (686)
T ss_dssp SSEEEEEEEEESCCCCCTTCEEEEEESSGGGTTTCCCCSSCSSCCBCCCBCTTTTSEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEecccCCCCCCEEEEEeChHHhCCCCCccccchhhhhcccccCCCCcEEEEEEeCCCCeEEEEEEE
Confidence 467888888763 589999999884 7987 45 777654 5899999999885 9999998
No 25
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=96.01 E-value=0.014 Score=55.37 Aligned_cols=57 Identities=19% Similarity=0.287 Sum_probs=46.2
Q ss_pred CCceeEEEEEcC----CCceEEEEecCC---CCcc--cc-eeee---c-CCcEEEEEEcCCce-EEEEEEEc
Q 028871 15 EKGVPTIITWNY----GGNEVAVEGSWD---NWTS--RR-ILHR---S-GKDHSILLVLPSGV-YHYKFIVD 71 (202)
Q Consensus 15 ~~~vpv~f~w~~----~g~~V~V~GsF~---nW~~--~~-~m~k---~-~~~f~~~l~Lp~G~-y~YKFiVD 71 (202)
...++|+|+-.. .|+.|+|+|+-. +|+. .+ +|.. + ...|++.+.||.|. .+|||++=
T Consensus 581 ~~~v~v~f~v~~~~~~~g~~v~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~~ 652 (683)
T 3bmv_A 581 GNQICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIKK 652 (683)
T ss_dssp SSEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSSCTTSEEEEEEEETTCEEEEEEEEE
T ss_pred CCeEEEEEEEEeccCCCCCEEEEEeCcHHhCCCChhhhhhhhcccCCCCCCcEEEEEEeCCCCcEEEEEEEE
Confidence 357889998764 589999999886 8996 35 7876 4 45899999999884 99999983
No 26
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=95.97 E-value=0.011 Score=55.24 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=45.8
Q ss_pred CCCceeEEEE-EcCCCceEEE-EecCCCCcc------cceeeecC-----CcEEEEEEcCCceEEEEEEEc
Q 028871 14 LEKGVPTIIT-WNYGGNEVAV-EGSWDNWTS------RRILHRSG-----KDHSILLVLPSGVYHYKFIVD 71 (202)
Q Consensus 14 ~~~~vpv~f~-w~~~g~~V~V-~GsF~nW~~------~~~m~k~~-----~~f~~~l~Lp~G~y~YKFiVD 71 (202)
....+.+.|+ |.+.+++|.| .|+|++|.. .++|.+.+ +.|++.+........|+|.|+
T Consensus 19 ~~~~~~i~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~~~~m~~~~~~~~~~~w~~~v~~~~~~~~Y~f~i~ 89 (588)
T 1j0h_A 19 DSETLHLRLRTKKDDIDRVELLHGDPYDWQNGAWQFQMMPMRKTGSDELFDYWFAEVKPPYRRLRYGFVLY 89 (588)
T ss_dssp SSSCEEEEEEEETTTCSEEEEEEECTTCEETTEECCEEEECEEEEECSSEEEEEEEECCTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCccEEEEEECCCCCccccccceEEEEeEEeecCCCeEEEEEEEECCCcEEEEEEEEE
Confidence 3566777776 7889999999 799999864 57998742 259999988777788999885
No 27
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=95.81 E-value=0.019 Score=54.52 Aligned_cols=56 Identities=21% Similarity=0.291 Sum_probs=45.3
Q ss_pred CCceeEEEEEcC----CCceEEEEecCC---CCccc--c-eeee---c-CCcEEEEEEcCCce-EEEEEEE
Q 028871 15 EKGVPTIITWNY----GGNEVAVEGSWD---NWTSR--R-ILHR---S-GKDHSILLVLPSGV-YHYKFIV 70 (202)
Q Consensus 15 ~~~vpv~f~w~~----~g~~V~V~GsF~---nW~~~--~-~m~k---~-~~~f~~~l~Lp~G~-y~YKFiV 70 (202)
...++|+|+-.. .|+.|+|+|+-. +|+.. + +|.. . ...|++.+.||.|. .+|||++
T Consensus 584 ~~~v~v~f~v~~~~~~~g~~~~v~G~~~~LG~W~~~~a~~~l~~~~~~~~~~W~~~v~lp~~~~~eyK~~~ 654 (686)
T 1d3c_A 584 GDQVSVRFVVNNATTALGQNVYLTGSVSELGNWDPAKAIGPMYNQVVYQYPNWYYDVSVPAGKTIEFKFLK 654 (686)
T ss_dssp SSEEEEEEEEECCCCCTTCEEEEEESSGGGTTTCGGGCBCCCBCSSSSCTTCEEEEEEEETTCEEEEEEEE
T ss_pred CCeEEEEEEEeeccCCCCCEEEEEeCcHHhCCCChhhhhhhhccccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 357889998763 589999999885 89964 5 6775 3 35899999999884 9999997
No 28
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=95.59 E-value=0.025 Score=54.16 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=46.7
Q ss_pred eEEEE-EcCCCceEEEEecCCCCcc-cceeeec-CCcEEEEEE-cCCceEEEEEEEc--Cee--ecCCCCCe
Q 028871 19 PTIIT-WNYGGNEVAVEGSWDNWTS-RRILHRS-GKDHSILLV-LPSGVYHYKFIVD--GDW--RYIPDLPF 82 (202)
Q Consensus 19 pv~f~-w~~~g~~V~V~GsF~nW~~-~~~m~k~-~~~f~~~l~-Lp~G~y~YKFiVD--G~w--~~dp~~p~ 82 (202)
-|.|+ |.+.+++|.|.+.+++|.. .++|.+. ++.|.+.+. +.+|. .|+|.|+ |.| ..||....
T Consensus 114 ~~~f~vwap~a~~V~l~~~~~~~~~~~~~m~~~~~g~w~~~v~~~~~g~-~Y~f~v~~~g~~~~~~DPya~~ 184 (718)
T 2e8y_A 114 HTVFKVWAPAATSAAVKLSHPNKSGRTFQMTRLEKGVYAVTVTGDLHGY-EYLFCICNNSEWMETVDQYAKA 184 (718)
T ss_dssp EEEEEEECTTCSEEEEEEECTTSCCEEEECEECGGGEEEEEEESCCTTC-EEEEEEEETTEEEEECCTTCSS
T ss_pred cEEEEEECCCCCEEEEEEEcCCCcceEEeCccCCCCEEEEEECCCCCCC-eEEEEEEeCCeEEEecCCcccc
Confidence 36677 9999999999999988864 4799986 468999887 45664 5666665 764 56776653
No 29
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=95.28 E-value=0.042 Score=51.03 Aligned_cols=56 Identities=23% Similarity=0.296 Sum_probs=44.8
Q ss_pred CCceeEEEEEcC----CCceEEEEecCC---CCccc---ceeee-cC-CcEEEEEEcCCce-EEEEEEE
Q 028871 15 EKGVPTIITWNY----GGNEVAVEGSWD---NWTSR---RILHR-SG-KDHSILLVLPSGV-YHYKFIV 70 (202)
Q Consensus 15 ~~~vpv~f~w~~----~g~~V~V~GsF~---nW~~~---~~m~k-~~-~~f~~~l~Lp~G~-y~YKFiV 70 (202)
...+.++|+-.. -|++|+|+|+-. +|+.. .+|.. +. +.|++.+.||.|. .+|||+|
T Consensus 417 ~~~v~V~F~v~~~~t~~Ge~v~vvGs~~eLG~W~~~~a~~~l~~~~~p~~W~~~v~lp~~~~~eYKyv~ 485 (516)
T 1vem_A 417 VTPVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQYPIQLYYDSHSNDWRGNVVLPAERNIEFKAFI 485 (516)
T ss_dssp CCEEEEEEEEESCCCCTTCEEEEEESSGGGTTTCSSSSCEECEEETTTTEEEEEEEEETTCCEEEEEEE
T ss_pred cCccceEEEEeeccCCCCCEEEEEeChhhhCCCChhhhceecccCCCCCEEEEEEEECCCCcEEEEEEE
Confidence 456888888653 589999999884 79875 46776 34 4899999999885 9999998
No 30
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=95.28 E-value=0.03 Score=56.40 Aligned_cols=63 Identities=14% Similarity=0.074 Sum_probs=47.3
Q ss_pred EEEE-EcCCCceEEEEe-cCCCCcc-cceeee--cCCcEEEEEE-cCCceEEEEEEEc------C----eeecCCCCCee
Q 028871 20 TIIT-WNYGGNEVAVEG-SWDNWTS-RRILHR--SGKDHSILLV-LPSGVYHYKFIVD------G----DWRYIPDLPFV 83 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~G-sF~nW~~-~~~m~k--~~~~f~~~l~-Lp~G~y~YKFiVD------G----~w~~dp~~p~~ 83 (202)
|.|+ |.+.|++|.|.+ +|++|.. .++|.+ ..+.|++.+. +.+|.+ |+|.|+ | ....||.....
T Consensus 306 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~m~~~~~~GvW~~~v~~~~~G~~-Y~y~v~~~~p~~g~~~~~~~~DPYa~~~ 384 (1083)
T 2fhf_A 306 VTFRVWAPTAQQVELVIYSADKKVIASHPMTRDSASGAWSWQGGSDLKGAF-YRYAMTVYHPQSRKVEQYEVTDPYAHSL 384 (1083)
T ss_dssp EEEEEECTTCSEEEEEEECTTCCEEEEEECEECTTTCEEEEEECGGGTTCE-EEEEEEEEETTTTEEEEEEECCTTCSCB
T ss_pred EEEEEECCCCCEEEEEEEcCCCCccceEECeECCCCCEEEEEECCCCCCCE-EEEEEEeecCCCCccccceecCCcccee
Confidence 5677 999999999999 9999975 578986 3578999775 677874 777775 3 34677766543
No 31
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=95.12 E-value=0.034 Score=53.43 Aligned_cols=52 Identities=17% Similarity=-0.029 Sum_probs=38.9
Q ss_pred EEEE-EcCCCceEEEEecCCCCccc---ceeeecCCcEEEEEE-cCCceEEEEEEEcC
Q 028871 20 TIIT-WNYGGNEVAVEGSWDNWTSR---RILHRSGKDHSILLV-LPSGVYHYKFIVDG 72 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~GsF~nW~~~---~~m~k~~~~f~~~l~-Lp~G~y~YKFiVDG 72 (202)
|.|+ |.+.|++|.|.+-+++|... ++|.+.++.|++.+. +.+|. .|+|.|++
T Consensus 138 ~~F~vwAp~A~~V~l~l~~~~~~~~~~~~~~~~~~g~W~~~~~~~~~g~-~Y~y~v~~ 194 (884)
T 4aio_A 138 VSLHLWAPTAQGVSVCFFDGPAGPALETVQLKESNGVWSVTGPREWENR-YYLYEVDV 194 (884)
T ss_dssp EEEEEECTTCSEEEEEEESTTTSCEEEEEECEEETTEEEEEEEGGGTTC-EEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCeeeeeeecCCCCEEEEEECCCCCCC-EEEEEEeC
Confidence 6788 99999999999965556543 244556789999886 56775 48888875
No 32
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=95.07 E-value=0.058 Score=50.96 Aligned_cols=60 Identities=15% Similarity=0.216 Sum_probs=45.7
Q ss_pred EEEE-EcCCCceEEEEecCCCCcccceeeecC-CcEEEEE-EcCCceEEEEEEEc-CeeecCCCCCeee
Q 028871 20 TIIT-WNYGGNEVAVEGSWDNWTSRRILHRSG-KDHSILL-VLPSGVYHYKFIVD-GDWRYIPDLPFVA 84 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~GsF~nW~~~~~m~k~~-~~f~~~l-~Lp~G~y~YKFiVD-G~w~~dp~~p~~~ 84 (202)
|.|+ |.+.|++|.|.+ +|+ .++|.+.+ +.|.+.+ .+.+|. .|+|.|+ |....||......
T Consensus 44 ~~F~vwap~a~~v~l~~---~~~-~~~m~~~~~g~~~~~~~~~~~g~-~Y~y~v~~~~~~~DP~a~~~~ 107 (618)
T 3m07_A 44 VRFRLWATGQQKVMLRL---AGK-DQEMQANGDGWFTLDVAGVTPGT-EYNFVLSDGMVVPDPASRAQK 107 (618)
T ss_dssp EEEEEECTTCSCEEEEE---TTE-EEECEECSTTEEEEEEETCCTTC-EEEEEETTSCEECCTTCSCBS
T ss_pred EEEEEECCCCCEEEEEE---CCC-cccCeecCCEEEEEEeCCCCCCC-EEEEEEeCCeEeccccceeee
Confidence 5677 999999999998 354 37999864 5788777 477786 6899995 5788888776543
No 33
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=94.94 E-value=0.027 Score=55.57 Aligned_cols=63 Identities=16% Similarity=0.132 Sum_probs=48.2
Q ss_pred EEEE-EcCCCceEEEEe-cCCCCcc---cceeeec-CCcEEEEEEcCCce-----EEEEEEEcC----eeecCCCCCe
Q 028871 20 TIIT-WNYGGNEVAVEG-SWDNWTS---RRILHRS-GKDHSILLVLPSGV-----YHYKFIVDG----DWRYIPDLPF 82 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~G-sF~nW~~---~~~m~k~-~~~f~~~l~Lp~G~-----y~YKFiVDG----~w~~dp~~p~ 82 (202)
|.|+ |++.|++|.|.+ ++++|.. +++|.+. ++.|.+.+.+.+|. +.|+|.|++ ....||....
T Consensus 146 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW~~~v~~~~G~~~~~g~~Y~yrv~~~~~~~~~~DPYA~~ 223 (877)
T 3faw_A 146 VEASLWSPSADSVTMIIYDKDNQNRVVATTPLVKNNKGVWQTILDTKLGIKNYTGYYYLYEIKRGKDKVKILDPYAKS 223 (877)
T ss_dssp EEEEEECTTCSEEEEEEEETTEEEEEEEEEECEECTTSEEEEEECGGGTCSCCTTCEEEEEEEETTEEEEECCTTCSC
T ss_pred EEEEEECCCCCEEEEEEEeCCCCccceeeeccccCCCCEEEEEECCCCCCccCCCeEEEEEEeeCCceeEecCcccee
Confidence 6787 999999999997 7888863 5799885 57899998776662 678888863 3567887653
No 34
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=94.85 E-value=0.017 Score=53.87 Aligned_cols=57 Identities=14% Similarity=0.106 Sum_probs=43.3
Q ss_pred CCceeEEEE-EcCCCceEEE-EecCCCCcc---cceeeec--CC---cEEEEEEcCCceEEEEEEEc
Q 028871 15 EKGVPTIIT-WNYGGNEVAV-EGSWDNWTS---RRILHRS--GK---DHSILLVLPSGVYHYKFIVD 71 (202)
Q Consensus 15 ~~~vpv~f~-w~~~g~~V~V-~GsF~nW~~---~~~m~k~--~~---~f~~~l~Lp~G~y~YKFiVD 71 (202)
...+.+.|+ |.+.+++|.| .|+|++|.. .++|++. .+ .|++.+........|||.|.
T Consensus 20 ~~~~~~~~~~~~~~a~~V~l~~~d~~~~~~~~~~~~M~~~~~~~~~~~w~~~i~~~~~~~~Y~f~i~ 86 (583)
T 1ea9_C 20 GTTVHLRIRTKKDDMTAVYALAGDKYMWDHTMEYVPMTKLATDELFDYWECEVTPPYRRVKYGFLLQ 86 (583)
T ss_dssp SSCEECCCEECTTCCSBEEEEEECSSSCTTTCEEEEECEEEECSSCEEECCEECCTTSCEEECBCCE
T ss_pred CCEEEEEEEECCCCccEEEEEECCCcCCCCcEEEEEEEEEeccCCeEEEEEEEECCCceEEEEEEEE
Confidence 445566565 7788999999 799999964 5799874 23 49998887777778888874
No 35
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=94.52 E-value=0.096 Score=50.09 Aligned_cols=63 Identities=17% Similarity=0.224 Sum_probs=46.6
Q ss_pred EEEE-EcCCCceEEEEe-cCCCCcc---cceeeec-CCcEEEEEEcC--Cc-----eEEEEEEEc--Ce--eecCCCCCe
Q 028871 20 TIIT-WNYGGNEVAVEG-SWDNWTS---RRILHRS-GKDHSILLVLP--SG-----VYHYKFIVD--GD--WRYIPDLPF 82 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~G-sF~nW~~---~~~m~k~-~~~f~~~l~Lp--~G-----~y~YKFiVD--G~--w~~dp~~p~ 82 (202)
|.|+ |.+.|++|.|.+ ++++|.. +++|.+. ++.|.+.+.-. +| -+.|+|.|+ |. ...||....
T Consensus 26 v~F~vwap~A~~V~l~l~~~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~g~~~~~g~~Y~y~v~~~~~~~~~~DPya~~ 105 (714)
T 2ya0_A 26 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYAKS 105 (714)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEEEEEECTTCSSSCSCCTTCEEEEEEEETTEEEEECCTTCSE
T ss_pred EEEEEECCCCCEEEEEEEeCCCCCccceEEeCccCCCCEEEEEECCccCCCccccCCcEEEEEEEeCCceEEecCCceee
Confidence 6777 999999999999 8888863 5799885 46899888631 34 267888886 53 467887654
No 36
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=94.37 E-value=0.039 Score=51.92 Aligned_cols=54 Identities=7% Similarity=0.009 Sum_probs=40.4
Q ss_pred eEEEE-E----cCCCceEEEEecCCCCcccceeee--c-----CCcEEEEEEcCCceEEEEEEEcC
Q 028871 19 PTIIT-W----NYGGNEVAVEGSWDNWTSRRILHR--S-----GKDHSILLVLPSGVYHYKFIVDG 72 (202)
Q Consensus 19 pv~f~-w----~~~g~~V~V~GsF~nW~~~~~m~k--~-----~~~f~~~l~Lp~G~y~YKFiVDG 72 (202)
-|.|+ | .+.+++|.|.+.|++=...++|.+ . ++.|++.+........|+|.|+|
T Consensus 31 ~v~f~v~~~~~ap~a~~V~l~~~~~~~~~~~~m~~~~~~~~~~~~~w~~~i~~~~~g~~Y~f~i~~ 96 (637)
T 1ji1_A 31 SVTLKLRTFKGDITSANIKYWDTADNAFHWVPMVWDSNDPTGTFDYWKGTIPASPSIKYYRFQIND 96 (637)
T ss_dssp CEEEEEEEETTCCSEEEEEEEETTTTEEEEEECEEEEECTTSSEEEEEEEECCCSSCEEEEEEEEE
T ss_pred EEEEEEEEecCcCCeeEEEEEEecCCCEEEEEeEEeeccccCCeeEEEEEEECCCceEEEEEEEEE
Confidence 46676 7 677899999999875223479988 2 24799988876666789999975
No 37
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=94.28 E-value=0.08 Score=52.31 Aligned_cols=61 Identities=13% Similarity=0.131 Sum_probs=44.7
Q ss_pred EEEE-EcCCCceEEEEecCCCCc----ccceeeec-CCcEEEEEE-cCCceEEEEEEE--cCe--eecCCCCCe
Q 028871 20 TIIT-WNYGGNEVAVEGSWDNWT----SRRILHRS-GKDHSILLV-LPSGVYHYKFIV--DGD--WRYIPDLPF 82 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~GsF~nW~----~~~~m~k~-~~~f~~~l~-Lp~G~y~YKFiV--DG~--w~~dp~~p~ 82 (202)
|.|+ |.+.+++|.|.+ |++|. ..++|.+. ++.|++.+. +.+|. .|+|.| +|. ...||....
T Consensus 327 v~F~vwaP~A~~V~l~l-f~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~g~-~Y~y~v~~~g~~~~~~DPya~~ 398 (921)
T 2wan_A 327 TSFRVWAPTASNVQLLL-YNSEKGSITKQLEMQKSDNGTWKLQVSGNLENW-YYLYQVTVNGTTQTAVDPYARA 398 (921)
T ss_dssp EEEEEECTTCSEEEEEE-ESSSSSCCSEEEECEECGGGEEEEEEESCCTTC-EEEEEEECSSCEEEECCTTCSS
T ss_pred EEEEEECCCCCEEEEEE-EeCCCCCcCeEEeCeeCCCCEEEEEEccCCCCC-EEEEEEEeCCeEEEecCCccee
Confidence 5676 889999999997 99994 45899986 468999876 45675 366666 554 456776543
No 38
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=93.06 E-value=0.017 Score=53.14 Aligned_cols=56 Identities=21% Similarity=0.276 Sum_probs=0.0
Q ss_pred CCceeEEEEE-c---CCCceEEEEecCC---CCcc--cceee-e-cCCcEEEEEEcCCce-EEEEEEE
Q 028871 15 EKGVPTIITW-N---YGGNEVAVEGSWD---NWTS--RRILH-R-SGKDHSILLVLPSGV-YHYKFIV 70 (202)
Q Consensus 15 ~~~vpv~f~w-~---~~g~~V~V~GsF~---nW~~--~~~m~-k-~~~~f~~~l~Lp~G~-y~YKFiV 70 (202)
...+.|+|+- . ..|++|+|+|+-. +|+. .++|. . ++..|++.+.||.|. ++|||+|
T Consensus 428 ~~~v~v~F~v~~~~t~~G~~v~v~G~~~~LG~W~~~~a~~l~~~~~~~~W~~~v~lp~~~~~eyKy~~ 495 (527)
T 1gcy_A 428 GALVSVSFRCDNGATQMGDSVYAVGNVSQLGNWSPAAALRLTDTSGYPTWKGSIALPAGQNEEWKCLI 495 (527)
T ss_dssp --------------------------------------------------------------------
T ss_pred CCEEEEEEEEecccCCCCCeEEEEcChhHhCCCCcccCccCccCCCCCeEEEEEEeCCCCcEEEEEEE
Confidence 3467888886 3 3589999999885 7987 46887 3 356899999999985 9999997
No 39
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=92.37 E-value=0.22 Score=49.74 Aligned_cols=62 Identities=18% Similarity=0.242 Sum_probs=45.1
Q ss_pred EEEE-EcCCCceEEEEe-cCCCCcc---cceeeec-CCcEEEEEEcC--Cc-----eEEEEEEEc--Ce--eecCCCCC
Q 028871 20 TIIT-WNYGGNEVAVEG-SWDNWTS---RRILHRS-GKDHSILLVLP--SG-----VYHYKFIVD--GD--WRYIPDLP 81 (202)
Q Consensus 20 v~f~-w~~~g~~V~V~G-sF~nW~~---~~~m~k~-~~~f~~~l~Lp--~G-----~y~YKFiVD--G~--w~~dp~~p 81 (202)
|.|+ |.+.|++|.|.+ +|++|.. +++|.+. ++.|.+.+.-. +| -+.|+|.|+ |. ...||...
T Consensus 333 v~F~vwAP~A~~V~L~l~d~~~~~~~~~~~~m~~~~~gvW~~~v~~~~~~g~~~~~G~~Y~y~i~~~~~~~~~~DPYa~ 411 (1014)
T 2ya1_A 333 VDLTLWSPSADKVSVVVYDKNDPDKVVGTVALEKGERGTWKQTLDSTNKLGITDFTGYYYQYQIERQGKTVLALDPYAK 411 (1014)
T ss_dssp EEEEEECTTCSEEEEEEECSSCTTSEEEEEECEECGGGEEEEEECTTCSSCCSCCTTCEEEEEEEETTEEEEECCTTCS
T ss_pred EEEEEECCCCCEEEEEEEECCCCCccceEEecccCCCCEEEEEEcccccCCccccCCcEEEEEEEeCCeEEEecCccce
Confidence 5677 999999999999 8888863 5899874 46899887631 23 256777776 43 56777654
No 40
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=90.77 E-value=0.56 Score=46.31 Aligned_cols=59 Identities=22% Similarity=0.501 Sum_probs=42.4
Q ss_pred ceeEEEEEcCCCceEEEEecC-------CCCcccc---eeee-cCCcEEEEEEcCCceEEEEEEEcCeee
Q 028871 17 GVPTIITWNYGGNEVAVEGSW-------DNWTSRR---ILHR-SGKDHSILLVLPSGVYHYKFIVDGDWR 75 (202)
Q Consensus 17 ~vpv~f~w~~~g~~V~V~GsF-------~nW~~~~---~m~k-~~~~f~~~l~Lp~G~y~YKFiVDG~w~ 75 (202)
+++|..--...+..+.+.|+| .+|++.- -|.+ .++.|+.+-.||+|.|+||+.++|.|.
T Consensus 152 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~w~p~~~~~~~~~~~~~~y~~~~~l~~g~y~~kv~~~~~w~ 221 (921)
T 2wan_A 152 KIPVTSAVSANPVTAVLVGDLQQALGAANNWSPDDDHTLLKKINPNLYQLSGTLPAGTYQYKIALDHSWN 221 (921)
T ss_dssp EECEEEEEECCCCCEEEEETTSGGGTCSSSSCTTCGGGBCEEEETTEEEEEEEECSEEEEEEEEETTSSS
T ss_pred cccccccccccccccccccchhhhccccccCCCCCCcceeeccCCcceeeeeccCCcceeEEEeecCccc
Confidence 455555544555677788866 4788642 3443 356788888999999999999998774
No 41
>2c3v_A Alpha-amylase G-6; carbohydrate-binding module, starch binding, carbohydrate binding, glycoside hydrolase, amylose, amylopectin; HET: TYI; 1.39A {Bacillus halodurans} PDB: 2c3v_B* 2c3w_A* 2c3x_A*
Probab=88.19 E-value=1.5 Score=32.11 Aligned_cols=61 Identities=18% Similarity=0.299 Sum_probs=42.0
Q ss_pred eeEEEEEcCCCceEEEEecCC--CCccc--ceeeec-CC-cEEEEEEcCCc-eEEEEEEEcC--eeecCCC
Q 028871 18 VPTIITWNYGGNEVAVEGSWD--NWTSR--RILHRS-GK-DHSILLVLPSG-VYHYKFIVDG--DWRYIPD 79 (202)
Q Consensus 18 vpv~f~w~~~g~~V~V~GsF~--nW~~~--~~m~k~-~~-~f~~~l~Lp~G-~y~YKFiVDG--~w~~dp~ 79 (202)
-.+++.+..+.+.|+|--.+. +|... ++|.+. .. -|..+|.|+.+ ..+|.| -|| .|-....
T Consensus 10 ~~vTvyY~sg~~~~ylHy~~~~g~Wt~vpgv~M~~~~~~Gw~~~TI~~~~~~~l~~~F-~dG~~~WDNN~g 79 (102)
T 2c3v_A 10 TDITIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKSEXEGXVKVTIEAEEGSQLRAAF-NNGSGQWDNNQG 79 (102)
T ss_dssp CSEEEEEECCCSSCEEEEEETTCCBCCTTCEECEECSSTTEEEEEECCCTTCEEEEEE-ECSSSCEECGGG
T ss_pred CEEEEEEcCCCCcEEEEEeCCCCCcccCCCcCccccccCCceEEEEecCCCceEEEEE-eCCCcccccCCC
Confidence 345566667888898875564 48753 689885 34 46799999965 688888 554 5865443
No 42
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=81.99 E-value=1.4 Score=35.80 Aligned_cols=48 Identities=8% Similarity=0.054 Sum_probs=37.0
Q ss_pred CCceEEEEecCCCCc--ccceeeec---CCcEEEEEEcCCceEEEEEEEcCeee
Q 028871 27 GGNEVAVEGSWDNWT--SRRILHRS---GKDHSILLVLPSGVYHYKFIVDGDWR 75 (202)
Q Consensus 27 ~g~~V~V~GsF~nW~--~~~~m~k~---~~~f~~~l~Lp~G~y~YKFiVDG~w~ 75 (202)
..+++||.|++.+|. ...+|... .+.|..++.|+.|. +|||.-+..|-
T Consensus 11 ~p~~lY~vG~~~gW~~~~~~~m~~~~~~~g~y~~~~yl~ag~-~fKf~~~~~~~ 63 (221)
T 4fch_A 11 PPKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDANS-EFKFGTKENEY 63 (221)
T ss_dssp CCSCCEEEETTTCTTSCCEEECEECTTCTTEEEEEEEECTTE-EEEEESSTTCC
T ss_pred CcceEEEEecCCCCCCCccceeeeccCCCceEEEEEEEcCCC-eEEEeeccCcc
Confidence 367899999999876 34678774 35799999998775 89999876553
No 43
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=79.34 E-value=6.6 Score=28.99 Aligned_cols=65 Identities=17% Similarity=0.298 Sum_probs=45.1
Q ss_pred cCCCCCCceeEEEEEcCCC---ceEEEEe-cCCCCcccceeeecCCcEEEEE-EcCCceEEEEEEEc-CeeecC
Q 028871 10 ASNPLEKGVPTIITWNYGG---NEVAVEG-SWDNWTSRRILHRSGKDHSILL-VLPSGVYHYKFIVD-GDWRYI 77 (202)
Q Consensus 10 ~~~~~~~~vpv~f~w~~~g---~~V~V~G-sF~nW~~~~~m~k~~~~f~~~l-~Lp~G~y~YKFiVD-G~w~~d 77 (202)
++...+.-.-+.+.+.+|+ ..|.|.| +-.+| ++|.|++..|.+.- ....|-..||+... |+|...
T Consensus 20 ~~~snp~~l~VlV~nv~G~GdI~~V~Ik~~~~~~W---~~M~rnGa~W~~~s~~~L~GplSfRvtts~G~~~va 90 (108)
T 2jnz_A 20 QKGSDPKKLVLDIKYTRPGDSLAEVELRQHGSEEW---EPLTKKGNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 90 (108)
T ss_dssp CTTCCSSEEEEEEEEEBTTBCEEEEEEECTTCCCC---EECEEETTEEEEECSSCCCSSEEEEEEETTTEEEEE
T ss_pred ecCCCccEEEEEEEEeCCCCCEEEEEEEeCCCCcE---eEccccCCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 3444556667777777554 4688996 66788 48999955899764 12447899998885 777665
No 44
>2djm_A Glucoamylase A; beta sandwich, anti-parallel, strach binding, carbohydrate binding, sugar binding protein; NMR {Rhizopus oryzae} PDB: 2v8l_A* 2v8m_A* 2vq4_A
Probab=60.50 E-value=27 Score=25.46 Aligned_cols=58 Identities=16% Similarity=0.126 Sum_probs=39.0
Q ss_pred CceeEEEEEcC--CCceEEEEec--CCCCcc-cc--eee--e-c--C--CcEEEEEEcCCc-eEEEEEEEcCe
Q 028871 16 KGVPTIITWNY--GGNEVAVEGS--WDNWTS-RR--ILH--R-S--G--KDHSILLVLPSG-VYHYKFIVDGD 73 (202)
Q Consensus 16 ~~vpv~f~w~~--~g~~V~V~Gs--F~nW~~-~~--~m~--k-~--~--~~f~~~l~Lp~G-~y~YKFiVDG~ 73 (202)
..+.-+++-.. -.|.|.|.=+ ||+|+. .. +.. + . + ..|...+.||.. .+--+|.|+|.
T Consensus 19 ~~l~GtV~V~NlafeK~V~VR~T~~~D~W~t~~~dv~a~y~~~~~~~~~D~F~F~i~l~~~~eFcIrY~v~g~ 91 (106)
T 2djm_A 19 STFSGKIYVKNIAYSKKVTVVYADGSDNWNNNGNIIAASFSGPISGSNYEYWTFSASVKGIKEFYIKYEVSGK 91 (106)
T ss_dssp SCEEEEEEECCSSSCEEEEEEEEETTSSCSSCCCEEECEEEEECTTSSCEEEEEEECCSSEEEEEEEEEESSC
T ss_pred CEEEEEEEEeecCcCcEEEEEECCCcCCCccccEEEEEEEecCCCCCCeEEEEEEEECCCCeEEEEEEEECCc
Confidence 44555666653 3578888877 999998 43 221 1 1 2 258889999865 37778999985
No 45
>3ft1_A PHL P 3 allergen; beta-barrel; 1.79A {Phleum pratense} SCOP: b.7.3.0 PDB: 3ft9_A
Probab=60.04 E-value=21 Score=25.78 Aligned_cols=60 Identities=18% Similarity=0.323 Sum_probs=41.8
Q ss_pred CCceeEEEEEcCCC---ceEEEEecCC-CCcccceeeecCCcEEEEEE-cCCceEEEEEEE-cCeeecC
Q 028871 15 EKGVPTIITWNYGG---NEVAVEGSWD-NWTSRRILHRSGKDHSILLV-LPSGVYHYKFIV-DGDWRYI 77 (202)
Q Consensus 15 ~~~vpv~f~w~~~g---~~V~V~GsF~-nW~~~~~m~k~~~~f~~~l~-Lp~G~y~YKFiV-DG~w~~d 77 (202)
+.-.-+.+...+|+ ..|.|.|+=. +| ++|.|-+..|.+.-. ...|-..||+.. ||++...
T Consensus 14 ~~~l~vlv~nv~G~gdI~~V~ik~s~t~~W---~~M~rwGa~W~~~s~~~l~GplSfRvt~~~G~~~v~ 79 (100)
T 3ft1_A 14 PKKLVLDIKYTRPGDSLAEVELRQHGSEEW---EPLTKKGNVWEVKSSKPLVGPFNFRFMSKGGMRNVF 79 (100)
T ss_dssp TTEEEEEEEEECTTCCEEEEEEECTTCCCC---EECEEETTEEEEECSSCCCSSEEEEEEETTCCEEEE
T ss_pred cceEEEEEEEcCCCccEEEEEEEeCCCCCe---EEecccCCEeEeCCCCCCCCCEEEEEEEcCCcEEEE
Confidence 45566777777554 4688999876 78 488885558987642 345788888877 5776654
No 46
>2eef_A Protein phosphatase 1, regulatory (inhibitor) subunit 3B; CBM_21 domain, carbohydrate binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.10 E-value=35 Score=26.57 Aligned_cols=58 Identities=16% Similarity=0.255 Sum_probs=41.3
Q ss_pred CceeEEEEEc--CCCceEEEEecCCCCcccc--eeeec--------CCcEEEEEEcCC-----c--eEEEEEEEcCe
Q 028871 16 KGVPTIITWN--YGGNEVAVEGSWDNWTSRR--ILHRS--------GKDHSILLVLPS-----G--VYHYKFIVDGD 73 (202)
Q Consensus 16 ~~vpv~f~w~--~~g~~V~V~GsF~nW~~~~--~m~k~--------~~~f~~~l~Lp~-----G--~y~YKFiVDG~ 73 (202)
..+.-+++-. ...+.|.|.=+||+|+... ++... -+.|...|.||+ + .+-.||.|+|.
T Consensus 46 ~~l~GtV~V~NlafeK~V~VR~T~D~Wkt~~dv~a~y~~~~~~~~~~D~F~F~I~lp~~~~~~~~leFcIrY~v~g~ 122 (156)
T 2eef_A 46 KAIAGTVKVQNLAFEKTVKIRMTFDTWKSYTDFPCQYVKDTYAGSDRDTFSFDISLPEKIQSYERMEFAVYYECNGQ 122 (156)
T ss_dssp TEEEEEEEECCSSSCCEEEEEEESSTTSSEEEEECEECCCSSSCSSSCEEEECCCCCSCCCTTSCCEEEEEEEETTE
T ss_pred CEEEEEEEEeccCCCcEEEEEEeECCCcccEEEEEEEccccCCCCCceEEEEEEECCCccCCCcEEEEEEEEEeCCC
Confidence 4566666666 3578999999999999753 44432 136888888876 3 37778889885
No 47
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=57.05 E-value=17 Score=32.42 Aligned_cols=42 Identities=10% Similarity=0.257 Sum_probs=31.4
Q ss_pred ceEEEEecCCCCccc--ceeeec---CCcEEEEEEcCCceEEEEEEEc
Q 028871 29 NEVAVEGSWDNWTSR--RILHRS---GKDHSILLVLPSGVYHYKFIVD 71 (202)
Q Consensus 29 ~~V~V~GsF~nW~~~--~~m~k~---~~~f~~~l~Lp~G~y~YKFiVD 71 (202)
+..||.|++++|... .+|.+. ++.|++...|..+. +|||+..
T Consensus 151 ~~~YlvG~~~gW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~fK~~~~ 197 (470)
T 4fe9_A 151 DGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTS-NFKIFPA 197 (470)
T ss_dssp TCEEEEETTTCSSGGGCEECEECSSCTTEEEEEEEESSCC-EEEEEEG
T ss_pred ceeEEEcccCCCCcccCeeeeeecCCCceEEEEEEeccCc-eEEEeec
Confidence 468999999999864 356664 34688888887655 7999964
No 48
>1yua_A Topoisomerase I; gene-regulating protein, DNA binding protein; NMR {Escherichia coli} SCOP: g.41.3.3 g.41.3.3
Probab=56.61 E-value=11 Score=28.21 Aligned_cols=26 Identities=12% Similarity=0.116 Sum_probs=21.0
Q ss_pred CCCCCceeEEEEEcCCCceEEEEecC
Q 028871 12 NPLEKGVPTIITWNYGGNEVAVEGSW 37 (202)
Q Consensus 12 ~~~~~~vpv~f~w~~~g~~V~V~GsF 37 (202)
...+.+.+++++|+...++-||+.+-
T Consensus 76 ~~D~~Gn~tivrfSRKtKeqYV~sE~ 101 (122)
T 1yua_A 76 QQDPEGNKTMVRFSRKTKQQYVSSEK 101 (122)
T ss_dssp SSCTTCCCEEEEEETTTTEEEEEECC
T ss_pred ccCCCCCeeeEEeeccchhheeeecc
Confidence 45567889999999999998888543
No 49
>2fqm_A Phosphoprotein, P protein; negative strand RNA virus, polymerase, replication, cofactor, viral protein; 2.30A {Vesicular stomatitis indiana virus} SCOP: d.378.1.1
Probab=52.27 E-value=12 Score=25.60 Aligned_cols=27 Identities=30% Similarity=0.591 Sum_probs=17.5
Q ss_pred ecCCCCcccceeeecCCcEEEEEEcCCc
Q 028871 35 GSWDNWTSRRILHRSGKDHSILLVLPSG 62 (202)
Q Consensus 35 GsF~nW~~~~~m~k~~~~f~~~l~Lp~G 62 (202)
|+|.+|+. -.|..+++.=+..+.+|.|
T Consensus 1 ~~~s~W~q-P~lk~~g~~KsL~Lf~P~g 27 (75)
T 2fqm_A 1 GSHMDWKQ-PELESDEHGKTLRLTLPEG 27 (75)
T ss_dssp ----CCCC-CEEEEETTEEEEEEECCSS
T ss_pred CCcccccC-ceeecCCCCceEEEeCCCC
Confidence 89999987 3577777777777888877
No 50
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=50.01 E-value=17 Score=27.61 Aligned_cols=24 Identities=29% Similarity=0.650 Sum_probs=20.1
Q ss_pred EEEcCCc-eEEEEEEEcCeeecCCCC
Q 028871 56 LLVLPSG-VYHYKFIVDGDWRYIPDL 80 (202)
Q Consensus 56 ~l~Lp~G-~y~YKFiVDG~w~~dp~~ 80 (202)
.+.|..| .|.|+| ++|+|+.+.+.
T Consensus 99 svtl~rG~t~~F~y-~~g~Wv~~gd~ 123 (126)
T 4dny_A 99 KVTLSVGNTLLFKY-VNGQWFRSGEL 123 (126)
T ss_dssp EEEECTTCEEEEEE-ETTEEEETTCC
T ss_pred EEEecCCCEEEEEE-cCCEEEEcccc
Confidence 4678888 599999 99999998775
No 51
>2r9f_A Calpain-1 catalytic subunit; protease, peptidase, inhibitor, alpha-ketoamide, hydrolase, thiol protease; HET: K2Z; 1.60A {Rattus norvegicus} SCOP: d.3.1.3 PDB: 1tlo_A* 2g8e_A* 1tl9_A* 2nqg_A* 2nqi_A* 2r9c_A* 2g8j_A* 1kxr_A 2ary_A 1zcm_A* 1mdw_A
Probab=44.35 E-value=11 Score=32.69 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=20.1
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 028871 60 PSGVYHYKFIVDGDWR---YIPDLPFV 83 (202)
Q Consensus 60 p~G~y~YKFiVDG~w~---~dp~~p~~ 83 (202)
+.|.|++||..+|+|+ +|+..|+.
T Consensus 120 ~~G~y~vr~~~~G~W~~VvVDD~LP~~ 146 (339)
T 2r9f_A 120 YAGIFHFQLWQFGEWVDVVVDDLLPTK 146 (339)
T ss_dssp CCSEEEEEEEETTEEEEEEEESCEEEE
T ss_pred CCceEEEEEeeCCEEEEEEEcCCCccc
Confidence 4599999999999997 67777764
No 52
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=43.69 E-value=18 Score=26.23 Aligned_cols=17 Identities=24% Similarity=0.407 Sum_probs=14.8
Q ss_pred EEEEcCCceEEEEEEEc
Q 028871 55 ILLVLPSGVYHYKFIVD 71 (202)
Q Consensus 55 ~~l~Lp~G~y~YKFiVD 71 (202)
+.+.|+.|.|..||..+
T Consensus 98 ~~v~L~aG~ntI~l~~~ 114 (127)
T 2vzp_A 98 VRVTLAAGVNKIKAVAT 114 (127)
T ss_dssp EEEEECSEEEEEEEEEC
T ss_pred EEEEECCCceEEEEEEe
Confidence 46889999999999875
No 53
>2nqa_A Calpain 8; calpain, calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC; HET: AR7; 2.20A {Homo sapiens}
Probab=40.86 E-value=10 Score=32.75 Aligned_cols=24 Identities=29% Similarity=0.695 Sum_probs=20.1
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 028871 60 PSGVYHYKFIVDGDWR---YIPDLPFV 83 (202)
Q Consensus 60 p~G~y~YKFiVDG~w~---~dp~~p~~ 83 (202)
+.|.|++||..+|+|+ +|+..|+.
T Consensus 115 ~~G~y~vr~~~~G~w~~VvVDD~lP~~ 141 (326)
T 2nqa_A 115 YAGIFHFQFWQYGEWVEVVIDDRLPTK 141 (326)
T ss_dssp CSSEEEEEEECSSSEEEEEEECCEEEE
T ss_pred CCceEEEEEEECCEEEEEEEeCcCccc
Confidence 4599999999999997 67777764
No 54
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=40.80 E-value=17 Score=27.07 Aligned_cols=18 Identities=17% Similarity=0.050 Sum_probs=14.9
Q ss_pred EEEEcCCceEEEEEEEcC
Q 028871 55 ILLVLPSGVYHYKFIVDG 72 (202)
Q Consensus 55 ~~l~Lp~G~y~YKFiVDG 72 (202)
+.+.|++|.+..+|..++
T Consensus 99 ~~v~L~aG~ntI~l~~~~ 116 (144)
T 2w47_A 99 IVANLNQGNNVIRATAIA 116 (144)
T ss_dssp EEEEECSEEEEEEEEECS
T ss_pred EEEEECCCccEEEEEEeC
Confidence 458899999999998654
No 55
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=40.48 E-value=43 Score=31.06 Aligned_cols=48 Identities=10% Similarity=0.091 Sum_probs=32.6
Q ss_pred eeEEEEEc-CCCceEEEEecCCCCcccceeeec--CC---cEEEEEEcCCceEEEEEEE
Q 028871 18 VPTIITWN-YGGNEVAVEGSWDNWTSRRILHRS--GK---DHSILLVLPSGVYHYKFIV 70 (202)
Q Consensus 18 vpv~f~w~-~~g~~V~V~GsF~nW~~~~~m~k~--~~---~f~~~l~Lp~G~y~YKFiV 70 (202)
+-+.|+=. ...++|.+.|+ .+++|.+. .+ .|++.+.......+|+|.|
T Consensus 125 ~~~r~~~~~~~~~~~~~~~~-----~~~~m~~~~~~~~~d~w~~~v~~~~~~~~Y~f~i 178 (645)
T 4aef_A 125 VHVLLRTQKGVIKGATFLGE-----KHVPMRKKASDELFDYFEVIVEGGDKRLNYSFEV 178 (645)
T ss_dssp EEEEEEEETTTEEEEEEESS-----SEEECEEEEECSSEEEEEEEEECSCSCEEEEEEE
T ss_pred EEEEEEcccCCcceEEEeCC-----CEEEEEEEecCCCeEEEEEEEECCCCceEEEEEE
Confidence 33444422 34567777754 45899985 33 3888888888888999987
No 56
>1mhx_A Immunoglobulin-binding protein G; alpha-beta protein, redesigned first beta-hairpin, immune SY; 1.80A {Finegoldia magna} SCOP: d.15.7.1 PDB: 1mi0_A
Probab=40.47 E-value=10 Score=24.98 Aligned_cols=13 Identities=38% Similarity=0.779 Sum_probs=10.8
Q ss_pred EcCeeecCCCCCe
Q 028871 70 VDGDWRYIPDLPF 82 (202)
Q Consensus 70 VDG~w~~dp~~p~ 82 (202)
|||+|.+|+...+
T Consensus 48 vdgeWsYD~ATkT 60 (65)
T 1mhx_A 48 VDGEWTYDDAAKT 60 (65)
T ss_dssp CCSEEEEETTTTE
T ss_pred CccEEEecCceeE
Confidence 6899999987764
No 57
>1ziv_A Calpain 9; cysteine protease, papain, calcium-dependent, thiol protease, structural genomics consortium, SGC, hydrolase; 2.31A {Homo sapiens} SCOP: d.3.1.3 PDB: 2p0r_A*
Probab=37.25 E-value=13 Score=32.38 Aligned_cols=24 Identities=25% Similarity=0.675 Sum_probs=20.1
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 028871 60 PSGVYHYKFIVDGDWR---YIPDLPFV 83 (202)
Q Consensus 60 p~G~y~YKFiVDG~w~---~dp~~p~~ 83 (202)
+.|.|++||..+|+|+ +|+..|+.
T Consensus 119 ~~G~y~~r~~~~G~W~~VvVDD~LP~~ 145 (339)
T 1ziv_A 119 YAGIFHFQFWQHSEWLDVVIDDRLPTF 145 (339)
T ss_dssp CCSEEEEEEECSSSEEEEEEECCEEES
T ss_pred cceEEEEEEeeCCEEEEEEEcCCCccC
Confidence 4699999999999997 67777764
No 58
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=36.64 E-value=22 Score=26.89 Aligned_cols=19 Identities=16% Similarity=0.219 Sum_probs=15.2
Q ss_pred EEEEcCCceEEEEEEEcCe
Q 028871 55 ILLVLPSGVYHYKFIVDGD 73 (202)
Q Consensus 55 ~~l~Lp~G~y~YKFiVDG~ 73 (202)
+.+.++.|.|...|...|.
T Consensus 115 ~~v~~~~G~h~lyl~f~g~ 133 (145)
T 1uy4_A 115 TNISKITGVHDIVLVFSGP 133 (145)
T ss_dssp EEEEEECSEEEEEEEESSC
T ss_pred EEecCCCceEEEEEEEeCC
Confidence 4466788999999998884
No 59
>4fe9_A Outer membrane protein SUSF; starch binding, IG fold, extracellular surface, outermembran carbohydrate-binding protein; HET: GLC BGC MTT; 2.00A {Bacteroides thetaiotaomicron}
Probab=36.45 E-value=17 Score=32.34 Aligned_cols=50 Identities=18% Similarity=0.239 Sum_probs=33.8
Q ss_pred CceEEEEecCCCCccc-------ceeeec---CCcEEEEEEcCCceEEEEEEEcCeeecCC
Q 028871 28 GNEVAVEGSWDNWTSR-------RILHRS---GKDHSILLVLPSGVYHYKFIVDGDWRYIP 78 (202)
Q Consensus 28 g~~V~V~GsF~nW~~~-------~~m~k~---~~~f~~~l~Lp~G~y~YKFiVDG~w~~dp 78 (202)
...+++.|++.+|... .+|... .+.|...+.+..| -+|||.-++.|-.+-
T Consensus 260 ~~~lyivG~~~~wg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~-gefKF~~~~~W~~~~ 319 (470)
T 4fe9_A 260 PTELYMTGSAYNWGTPAGDPNAWKALVPVNGTKGTFWGIFYFAAN-DQVKFAPQANWGNDF 319 (470)
T ss_dssp CSCCEEEEGGGGGGCSTTCTTTCEECEECTTCTTEEEEEEEECTT-CEEEEESSSSSSSCB
T ss_pred cceEEEEeecccCCCCCCCcccccccccccCcCceEEEEEEECCC-ceEEEEecCCccccc
Confidence 4679999999877531 244432 3467777766544 488999998886553
No 60
>1igd_A Protein G; immunoglobulin binding protein; 1.10A {Streptococcus SP} SCOP: d.15.7.1 PDB: 1igc_A 2igd_A 2igh_A 1qkz_A 2igg_A 1uwx_A 3mp9_A
Probab=35.19 E-value=14 Score=24.32 Aligned_cols=13 Identities=38% Similarity=0.634 Sum_probs=10.1
Q ss_pred EcCeeecCCCCCe
Q 028871 70 VDGDWRYIPDLPF 82 (202)
Q Consensus 70 VDG~w~~dp~~p~ 82 (202)
|||+|.+|+.-.+
T Consensus 44 vdgew~yd~atkt 56 (61)
T 1igd_A 44 VDGVWTYDDATKT 56 (61)
T ss_dssp CCCEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5889999887653
No 61
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=34.10 E-value=14 Score=27.39 Aligned_cols=20 Identities=10% Similarity=0.142 Sum_probs=15.7
Q ss_pred EEEEcCCceEEEEEEEcCee
Q 028871 55 ILLVLPSGVYHYKFIVDGDW 74 (202)
Q Consensus 55 ~~l~Lp~G~y~YKFiVDG~w 74 (202)
+.+.++.|.|..+|...|.|
T Consensus 100 ~~v~~~~G~h~l~l~f~G~~ 119 (133)
T 1uxx_X 100 CSITNTTGQHDLYLVFSGPV 119 (133)
T ss_dssp EEEEEECSEEEEEEEESSCC
T ss_pred EEEccCCcEEEEEEEEECCc
Confidence 34667899999999988853
No 62
>3fil_A Immunoglobulin G-binding protein G; dimerization, beta sheet, alpha helix, improved hydrophobic packing of core residues, protein binding; HET: FME; 0.88A {Streptococcus SP} SCOP: d.15.7.1 PDB: 2qmt_A 2jsv_X 2ju6_X 2k0p_A 2kq4_X 2kwd_A 2lgi_A 2gi9_A 1gb1_A 1pga_A 1pgb_A 2gb1_A 3gb1_A 2klk_A 2rmm_A 2onq_A 2on8_A 2j52_A 2j53_A 3v3x_A* ...
Probab=33.41 E-value=10 Score=24.48 Aligned_cols=13 Identities=38% Similarity=0.777 Sum_probs=9.6
Q ss_pred EcCeeecCCCCCe
Q 028871 70 VDGDWRYIPDLPF 82 (202)
Q Consensus 70 VDG~w~~dp~~p~ 82 (202)
|||+|.+|+.-.+
T Consensus 39 vdgeW~YD~ATkT 51 (56)
T 3fil_A 39 VDGEWTYDDATKT 51 (56)
T ss_dssp CCCEEEEEGGGTE
T ss_pred CccEEEecCceeE
Confidence 6888988876553
No 63
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=32.57 E-value=28 Score=26.16 Aligned_cols=19 Identities=16% Similarity=0.349 Sum_probs=15.6
Q ss_pred EEEEEcCCceEEEEEEEcC
Q 028871 54 SILLVLPSGVYHYKFIVDG 72 (202)
Q Consensus 54 ~~~l~Lp~G~y~YKFiVDG 72 (202)
++.+.|+.|.+..||..++
T Consensus 96 ~~~v~L~aG~ntI~l~~~~ 114 (145)
T 2w3j_A 96 NVDIPLKAGTNSIKLVAET 114 (145)
T ss_dssp EEEEEECSEEEEEEEEECS
T ss_pred EEEEEECCCceEEEEEEec
Confidence 3578899999999998754
No 64
>4a02_A EFCBM33A, CBM33, chitin binding protein; chitin degradation, chitin oxidation; 0.95A {Enterococcus faecalis} SCOP: b.1.18.0
Probab=32.15 E-value=1.5e+02 Score=23.13 Aligned_cols=69 Identities=17% Similarity=0.340 Sum_probs=41.1
Q ss_pred eEEEEEcCCCc------eEEEEecCCCCcccceeeec---------------CCcEEEEEEcCCceEEEEEEEcCeeecC
Q 028871 19 PTIITWNYGGN------EVAVEGSWDNWTSRRILHRS---------------GKDHSILLVLPSGVYHYKFIVDGDWRYI 77 (202)
Q Consensus 19 pv~f~w~~~g~------~V~V~GsF~nW~~~~~m~k~---------------~~~f~~~l~Lp~G~y~YKFiVDG~w~~d 77 (202)
.++|+|...+. ++||+- .+|.+..||.++ ++.++..+.||.|+-- +++|=..|..+
T Consensus 75 ~~~f~w~~TA~H~t~~~~~YITK--~gwdp~~pLtw~dle~~~~~~~~~~~p~~~y~~~v~lP~~rsG-~hVI~~vWq~~ 151 (166)
T 4a02_A 75 PLDITWNLTAQHRTASWDYYITK--NGWNPNQPLDIKNFDKIASIDGKQEVPNKVVKQTINIPTDRKG-YHVIYAVWGIG 151 (166)
T ss_dssp EEEEEEEESSCCCEEEEEEEEEC--TTCCTTSCCCGGGEEEEEEEEEEEECCCSEEEEEEEECTTCCE-EEEEEEEEEES
T ss_pred ceEEEEeeecccCCCeEEEEEcC--CCCCCCCCccHHHCeeeeeecCCCcCCCCeEEEEEEeCCCCcc-CEEEEEEEEec
Confidence 47899985432 578874 455554455432 2346677778755322 22566789887
Q ss_pred CCCCeeeCCCCCeeeeEEec
Q 028871 78 PDLPFVADELGGVCNLLDVH 97 (202)
Q Consensus 78 p~~p~~~d~~G~~nNvl~V~ 97 (202)
+. .....|+++|.
T Consensus 152 Dt-------~eaFY~csDV~ 164 (166)
T 4a02_A 152 DT-------VNAFYQAIDVN 164 (166)
T ss_dssp SS-------SEEEEEEEEEE
T ss_pred CC-------CCCCEEEEEEE
Confidence 54 22367777763
No 65
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=31.58 E-value=35 Score=25.36 Aligned_cols=19 Identities=16% Similarity=0.058 Sum_probs=15.6
Q ss_pred EEEEEcCCceEEEEEEEcC
Q 028871 54 SILLVLPSGVYHYKFIVDG 72 (202)
Q Consensus 54 ~~~l~Lp~G~y~YKFiVDG 72 (202)
++.+.|+.|.+..||.-++
T Consensus 98 ~~~v~L~aG~ntI~l~~~~ 116 (139)
T 2w87_A 98 TIDVDLVQGNNIVQLSATT 116 (139)
T ss_dssp EEEEEECSEEEEEEEEESS
T ss_pred EEEEEECCCceEEEEEEcC
Confidence 3568999999999998764
No 66
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=29.79 E-value=16 Score=26.87 Aligned_cols=17 Identities=12% Similarity=0.225 Sum_probs=14.3
Q ss_pred EEEEcCCceEEEEEEEc
Q 028871 55 ILLVLPSGVYHYKFIVD 71 (202)
Q Consensus 55 ~~l~Lp~G~y~YKFiVD 71 (202)
+.+.|+.|.|..+|...
T Consensus 100 ~~v~l~~G~h~l~l~~~ 116 (131)
T 1uxz_A 100 HTVNLSAGSHQFGIKAN 116 (131)
T ss_dssp EEEEECSEEECEEEEEE
T ss_pred EEEEeCCCeEEEEEEEc
Confidence 45788999999998886
No 67
>2khu_A Immunoglobulin G-binding protein G, DNA polymerase IOTA; UBM, ubiquitin-binding domain, translesion synthesis, TLS, ubiquitin-binding protein; NMR {Streptococcus SP} PDB: 2khw_A 2l0f_B*
Probab=28.87 E-value=12 Score=27.41 Aligned_cols=13 Identities=38% Similarity=0.777 Sum_probs=0.0
Q ss_pred EcCeeecCCCCCe
Q 028871 70 VDGDWRYIPDLPF 82 (202)
Q Consensus 70 VDG~w~~dp~~p~ 82 (202)
|||+|.+|+.-.+
T Consensus 39 vdgew~yd~atkt 51 (108)
T 2khu_A 39 VDGEWTYDDATKT 51 (108)
T ss_dssp -------------
T ss_pred CCceEeecCccee
Confidence 6899999987764
No 68
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=28.84 E-value=34 Score=26.54 Aligned_cols=19 Identities=16% Similarity=0.272 Sum_probs=15.1
Q ss_pred EEEEcCCceEEEEEEEcCe
Q 028871 55 ILLVLPSGVYHYKFIVDGD 73 (202)
Q Consensus 55 ~~l~Lp~G~y~YKFiVDG~ 73 (202)
+.+.++.|.|...|...|.
T Consensus 137 ~~v~~~~G~hdLylvf~G~ 155 (168)
T 1od3_A 137 ATISNTAGVKDIVLVFSGP 155 (168)
T ss_dssp EEEEEECSEEEEEEEESSC
T ss_pred EEEcCCCcEEEEEEEEECC
Confidence 3466788999999988874
No 69
>2rpv_A Immunoglobulin G-binding protein G; lanthanide binding peptide, LBT, paramagnetic effect, olivia, cell WALL, IGG-binding protein; NMR {Streptococcus SP}
Probab=27.37 E-value=23 Score=24.15 Aligned_cols=13 Identities=38% Similarity=0.777 Sum_probs=9.7
Q ss_pred EcCeeecCCCCCe
Q 028871 70 VDGDWRYIPDLPF 82 (202)
Q Consensus 70 VDG~w~~dp~~p~ 82 (202)
|||+|.+|+.-.+
T Consensus 58 vdgeWsYD~ATkT 70 (75)
T 2rpv_A 58 VDGEWTYDDATKT 70 (75)
T ss_dssp CCSEEEEETTTTE
T ss_pred CCceEeecCceeE
Confidence 5888888887653
No 70
>4gln_D D-RFX001; heterochiral protein-protein complex, D-protein antagonist, factor-inihibitor complex; HET: DTY DSG DTH DVA DPN DTR DGL DIL DAS; 1.60A {Synthetic} PDB: 4gls_D* 4gls_C*
Probab=27.27 E-value=23 Score=22.89 Aligned_cols=16 Identities=25% Similarity=0.476 Sum_probs=12.3
Q ss_pred EEEEc-CeeecCCCCCe
Q 028871 67 KFIVD-GDWRYIPDLPF 82 (202)
Q Consensus 67 KFiVD-G~w~~dp~~p~ 82 (202)
..-|| |+|.+|+.-.+
T Consensus 35 ~n~~d~geWtYddaTKT 51 (56)
T 4gln_D 35 SXFSDFDDWTYDDATKT 51 (56)
T ss_pred hcCCcCCeeEecCccee
Confidence 45677 99999987654
No 71
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=27.04 E-value=1e+02 Score=28.92 Aligned_cols=53 Identities=9% Similarity=0.053 Sum_probs=32.5
Q ss_pred ceeEEEEEcCCCceEEEEecCCCCcccceeeecCC---cEEEEEEcCCceEEEEEEEcC
Q 028871 17 GVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGK---DHSILLVLPSGVYHYKFIVDG 72 (202)
Q Consensus 17 ~vpv~f~w~~~g~~V~V~GsF~nW~~~~~m~k~~~---~f~~~l~Lp~G~y~YKFiVDG 72 (202)
.+.+.|+=..+..+|.+...-..|.. .|....+ .|++.+. ..+..+|+|.+++
T Consensus 133 ~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~Y~f~~~~ 188 (696)
T 4aee_A 133 EIIIRLIAPTEINEPLIDLGNEIREP--LTKHVVGDNIVYQYIIP-SRSILRYRFIFNY 188 (696)
T ss_dssp EEEEEEEEETTSCCCEEECSSCEECC--SEEEEETTEEEEEEEEE-CCSEEEEEEEEEE
T ss_pred EEEEEEEEcCCCCEEEEEcCCcceee--eeeeecCCceEEEEEEc-CCCeEEEEEEEEE
Confidence 45555553346666766544334432 3443322 6888888 7788999999963
No 72
>2bem_A CBP21; chitin-binding protein, chitin degradation, chitin-binding, FNIII-like fold; 1.55A {Serratia marcescens} SCOP: b.1.18.2 PDB: 2lhs_A 2ben_A
Probab=26.90 E-value=2.1e+02 Score=22.29 Aligned_cols=69 Identities=16% Similarity=0.338 Sum_probs=41.1
Q ss_pred eEEEEEcCCCc------eEEEEecCCCCcccceeeec-----------------CCcEEEEEEcCCceEEEEEEEcCeee
Q 028871 19 PTIITWNYGGN------EVAVEGSWDNWTSRRILHRS-----------------GKDHSILLVLPSGVYHYKFIVDGDWR 75 (202)
Q Consensus 19 pv~f~w~~~g~------~V~V~GsF~nW~~~~~m~k~-----------------~~~f~~~l~Lp~G~y~YKFiVDG~w~ 75 (202)
..+|+|...+. ++||+- .+|.+..||.++ ++.++..+.||.|+--| ++|=..|.
T Consensus 76 ~~~f~w~~TA~H~t~~~~~YITK--~gwdp~~pLtw~dlel~pf~~~~~~~~~p~~~~~~~~~lP~~rsG~-hVI~~vWq 152 (170)
T 2bem_A 76 PNSFTWKLTARHSTTSWRYFITK--PNWDASQPLTRASFDLTPFCQFNDGGAIPAAQVTHQCNIPADRSGS-HVILAVWD 152 (170)
T ss_dssp EEEEEEEESSCCCEEEEEEEEEC--TTCCTTSCCCGGGEEEEEEEEEECTTCCCCSEEEEEEEECTTCCEE-EEEEEEEE
T ss_pred cEEEEEEeecccCCceEEEEECC--CCCCCCCCccHHHccccceeecCCCCcCCCceEEEEEEcCCCCccC-EEEEEEEE
Confidence 67899985432 578884 234443344321 13466778888765433 55557898
Q ss_pred cCCCCCeeeCCCCCeeeeEEec
Q 028871 76 YIPDLPFVADELGGVCNLLDVH 97 (202)
Q Consensus 76 ~dp~~p~~~d~~G~~nNvl~V~ 97 (202)
.++. .....|+++|.
T Consensus 153 ~~Dt-------~eaFY~c~DV~ 167 (170)
T 2bem_A 153 IADT-------ANAFYQAIDVN 167 (170)
T ss_dssp ESSS-------SEEEEEEEEEE
T ss_pred eccC-------CCCCEEEEEEE
Confidence 8751 12477777773
No 73
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=26.65 E-value=25 Score=26.19 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=15.2
Q ss_pred EEEEcCCceEEEEEEEcCe
Q 028871 55 ILLVLPSGVYHYKFIVDGD 73 (202)
Q Consensus 55 ~~l~Lp~G~y~YKFiVDG~ 73 (202)
+.+.++.|.|..+|...|.
T Consensus 107 ~~v~~~~G~h~l~l~f~g~ 125 (142)
T 1w9s_A 107 GNVQIQPGTYDVYLVFKGS 125 (142)
T ss_dssp EEEEECSEEEEEEEEEESC
T ss_pred EEEccCCcEEEEEEEEECC
Confidence 3467789999999998764
No 74
>3d30_A YOAJ, expansin like protein; peptidoglycan associated protei unknown function, MLTA, bacteria autolysis, peptidoglycan-B protein; 1.90A {Bacillus subtilis} PDB: 2bh0_A
Probab=25.97 E-value=2.2e+02 Score=22.63 Aligned_cols=43 Identities=14% Similarity=0.233 Sum_probs=27.2
Q ss_pred ceEEEEecCCCCcccceeeecCCcEEEEEEcCCceEEEEEEE-cCeee
Q 028871 29 NEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIV-DGDWR 75 (202)
Q Consensus 29 ~~V~V~GsF~nW~~~~~m~k~~~~f~~~l~Lp~G~y~YKFiV-DG~w~ 75 (202)
.+|.|.|+ .+| ++|.|+...|...-.+..+.+.+|.-. ||++.
T Consensus 139 ~~v~i~~~-~~W---~~m~r~~~n~~~~~~~~~~pls~rvT~~~G~~v 182 (208)
T 3d30_A 139 MKMEYEKD-GKW---INMEKMDYNHFVSTNLGTGSLKVRMTDIRGKVV 182 (208)
T ss_dssp EEEEEEET-TEE---EEEEECTTSCEEEECCCSSSEEEEEEETTCCEE
T ss_pred EEEEEecC-CcE---EEccccccceeecCCCCCCCEEEEEEECCCCEE
Confidence 46788877 456 578887654444345555667777654 56665
No 75
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=25.22 E-value=42 Score=32.45 Aligned_cols=24 Identities=25% Similarity=0.545 Sum_probs=20.5
Q ss_pred CCceEEEEEEEcCeee---cCCCCCee
Q 028871 60 PSGVYHYKFIVDGDWR---YIPDLPFV 83 (202)
Q Consensus 60 p~G~y~YKFiVDG~w~---~dp~~p~~ 83 (202)
+.|.|++||..+|+|+ +|+..|+.
T Consensus 135 ~~G~y~~~~~~~G~w~~V~vDD~lP~~ 161 (900)
T 1qxp_A 135 YAGIFHFQLWQFGEWVDVVVDDLLPTK 161 (900)
T ss_dssp CSSEEEEEEEETTEEEEEEEESCBCEE
T ss_pred cCceEEEEEeECCEEEEEEECCccccc
Confidence 3599999999999997 68888864
No 76
>4fem_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: ACX; 2.50A {Bacteroides thetaiotaomicron}
Probab=25.15 E-value=74 Score=27.12 Aligned_cols=48 Identities=8% Similarity=0.054 Sum_probs=34.1
Q ss_pred CceEEEEecCCCCc--ccceeeec---CCcEEEEEEcCCceEEEEEEEcCeeec
Q 028871 28 GNEVAVEGSWDNWT--SRRILHRS---GKDHSILLVLPSGVYHYKFIVDGDWRY 76 (202)
Q Consensus 28 g~~V~V~GsF~nW~--~~~~m~k~---~~~f~~~l~Lp~G~y~YKFiVDG~w~~ 76 (202)
.+..||.|+..+|. ...+|... .+.|.....|..| ..|||.-+..|-.
T Consensus 149 p~~lYlvG~~~~~~w~~~~~l~~~~~~~g~y~~~~yl~~~-~~fKf~~~~~~~~ 201 (358)
T 4fem_A 149 PKTMFIVGSMLDTDWKVWKPMAGVYGMDGQFYSMIYFDAN-SEFKFGTKENEYI 201 (358)
T ss_dssp CSCCEEEETTTCTTSCCEEECEECTTSTTEEEEEEEECTT-EEEEEESSTTCCB
T ss_pred cceEEEeccccCCCCcccceeeeccCCCceEEEEEEecCC-ceEEeccccCCcc
Confidence 46789999997654 33466653 4578888899866 5799988765543
No 77
>1bmw_A PHL P II, pollen allergen PHL P2; allergy, immunoglobulins, immunology,; NMR {Phleum pratense} SCOP: b.7.3.1 PDB: 1who_A 1whp_A 2vxq_A
Probab=24.17 E-value=14 Score=26.47 Aligned_cols=61 Identities=20% Similarity=0.406 Sum_probs=40.3
Q ss_pred CCceeEEEEEcC-CCceEEEEe-cCCCCcccceeeec-CCcEEEEE--EcCCceEEEEEEEc-CeeecCCC
Q 028871 15 EKGVPTIITWNY-GGNEVAVEG-SWDNWTSRRILHRS-GKDHSILL--VLPSGVYHYKFIVD-GDWRYIPD 79 (202)
Q Consensus 15 ~~~vpv~f~w~~-~g~~V~V~G-sF~nW~~~~~m~k~-~~~f~~~l--~Lp~G~y~YKFiVD-G~w~~dp~ 79 (202)
+.-.-+.+...+ +=..|.|.| +-.+| .+|.|+ +..|.+.- .| .|-+.||+... |++....+
T Consensus 14 ~~~l~vlv~nv~gdI~~V~ik~~~~~~W---~~M~r~wGa~W~~~~~~~L-~GplSfRvt~~~G~~~v~~n 80 (96)
T 1bmw_A 14 EKHLAVLVKYEGDTMAEVELREHGSDEW---VAMTKGEGGVWTFDSEEPL-QGPFNFRFLTEKGMKNVFDD 80 (96)
T ss_dssp SSBCCBCCCCSSSCCCCCEECCSSSSSC---EECBCCSSSSBBCBCCSSC-CCCCCBCCEETTTEECCBSS
T ss_pred CceEEEEEEEeCCCEEEEEEEECCCCcE---EECccCcCceeEeCCCCCC-CCCEEEEEEEcCCcEEEEee
Confidence 334445555554 236889999 46788 489998 55798654 23 27888888875 78777643
No 78
>4fch_A Outer membrane protein SUSE; starch binding, extracellular, carbohydrate-B protein; HET: GLC; 1.30A {Bacteroides thetaiotaomicron}
Probab=23.95 E-value=40 Score=26.96 Aligned_cols=46 Identities=22% Similarity=0.278 Sum_probs=31.6
Q ss_pred ceEEEEec--CCCCccc--ceeee---cCCcEEEEEEcCCceEEEEEEEcCee
Q 028871 29 NEVAVEGS--WDNWTSR--RILHR---SGKDHSILLVLPSGVYHYKFIVDGDW 74 (202)
Q Consensus 29 ~~V~V~Gs--F~nW~~~--~~m~k---~~~~f~~~l~Lp~G~y~YKFiVDG~w 74 (202)
..|+|.|+ -++|... .+|.. .++.|.....|..|..+++|..+..|
T Consensus 117 ~~v~liG~at~~gW~~~~~~~~t~~~t~~g~~~~~~~l~~Ge~k~~~~~~~DW 169 (221)
T 4fch_A 117 AEVYLFGNTTGGSWAFNDEWKFTVPATKDGNFVSPAMTASGEVRMCFKTDLDW 169 (221)
T ss_dssp CCEEEEBGGGTSBCSCBGGGBCBCCSSTTCCEECCCCCSCEECEEEECCSSCG
T ss_pred ceEEEEEeecCCCCCCCcccceeeccCCCceEEeEEEecCCcEEEEEcCCCCc
Confidence 46999998 4689864 35554 24578878889999877766555433
No 79
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=23.62 E-value=56 Score=23.68 Aligned_cols=21 Identities=19% Similarity=0.445 Sum_probs=18.0
Q ss_pred EcCCceEEEEEEEcCeeecCC
Q 028871 58 VLPSGVYHYKFIVDGDWRYIP 78 (202)
Q Consensus 58 ~Lp~G~y~YKFiVDG~w~~dp 78 (202)
.++||+|.---+|+|+|+-.-
T Consensus 27 ~~~PG~Y~vdI~vN~~~~~~~ 47 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNNGYMATR 47 (125)
T ss_dssp SSCSEEEEEEEEETTEEEEEE
T ss_pred CcCCcEEEEEEEECCeEccce
Confidence 467999999999999998654
No 80
>1xbr_A Protein (T protein); complex (transcription factor/DNA), transcription factor, DNA-binding protein, transcription/DNA complex; HET: DNA; 2.50A {Xenopus laevis} SCOP: b.2.5.4
Probab=22.80 E-value=44 Score=26.60 Aligned_cols=28 Identities=21% Similarity=0.388 Sum_probs=20.6
Q ss_pred CcEEEEEEcCC-ceEEEEEEEcCeeecCCC
Q 028871 51 KDHSILLVLPS-GVYHYKFIVDGDWRYIPD 79 (202)
Q Consensus 51 ~~f~~~l~Lp~-G~y~YKFiVDG~w~~dp~ 79 (202)
..|.+.+++.+ ..++||| ++|+|..+..
T Consensus 46 ~~Y~v~l~~~~~D~~ryk~-~~~~W~~~gk 74 (184)
T 1xbr_A 46 AMYTVLLDFVAADNHRWKY-VNGEWVPGGK 74 (184)
T ss_dssp SEEEEEEEEEESSSCEEEE-ETTEEEEESS
T ss_pred cCeEEEEEEEEccCceEEE-ECCcEEEcCc
Confidence 35777777644 5799998 7999987643
No 81
>2jox_A Churchill protein; zinc, transcription; NMR {Homo sapiens}
Probab=21.69 E-value=48 Score=24.24 Aligned_cols=12 Identities=17% Similarity=0.354 Sum_probs=10.0
Q ss_pred ceEEEEEEEcCe
Q 028871 62 GVYHYKFIVDGD 73 (202)
Q Consensus 62 G~y~YKFiVDG~ 73 (202)
.+|+|+|-|+|.
T Consensus 68 A~HeYtF~V~~~ 79 (106)
T 2jox_A 68 ARHEYTFSIMDE 79 (106)
T ss_dssp EEEEEEEEEETT
T ss_pred eeeeEEEEEecC
Confidence 489999999764
Done!