Query 028875
Match_columns 202
No_of_seqs 239 out of 1749
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 05:49:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfj_A Putative elicitor-respo 99.9 4.2E-25 1.4E-29 159.7 17.4 127 39-201 6-136 (136)
2 2fk9_A Protein kinase C, ETA t 99.9 1.3E-24 4.5E-29 160.8 16.0 120 38-193 24-155 (157)
3 2dmh_A Myoferlin; beta-sandwic 99.9 7.7E-24 2.6E-28 153.7 15.0 123 40-199 4-137 (140)
4 1gmi_A Protein kinase C, epsil 99.9 6.5E-24 2.2E-28 153.6 13.6 119 41-197 4-135 (136)
5 2ep6_A MCTP2 protein; beta san 99.9 1.5E-24 5.3E-29 156.2 10.0 119 38-195 8-132 (133)
6 3kwu_A MUNC13-1; calcium bindi 99.9 1.9E-23 6.6E-28 153.0 15.1 117 39-194 13-146 (148)
7 1rlw_A Phospholipase A2, CALB 99.9 1.7E-23 5.9E-28 149.2 12.0 115 42-194 2-124 (126)
8 2nq3_A Itchy homolog E3 ubiqui 99.9 2E-22 6.8E-27 151.7 16.5 125 40-198 33-164 (173)
9 3m7f_B E3 ubiquitin-protein li 99.9 6.8E-23 2.3E-27 154.5 12.4 127 39-196 4-142 (176)
10 3b7y_A E3 ubiquitin-protein li 99.9 4.1E-23 1.4E-27 152.1 10.7 126 39-195 16-153 (153)
11 3pyc_A E3 ubiquitin-protein li 99.9 2E-21 6.8E-26 139.7 15.5 91 42-133 4-100 (132)
12 1a25_A CALB, protein kinase C 99.9 1.2E-21 4.2E-26 143.6 9.7 92 41-132 29-128 (149)
13 2b3r_A Phosphatidylinositol-4- 99.9 2.9E-21 9.8E-26 139.4 11.4 95 38-132 15-118 (134)
14 3rdl_A Protein kinase C alpha 99.9 3.9E-21 1.3E-25 138.7 11.4 93 41-133 14-114 (137)
15 3fbk_A RGS3, RGP3, regulator o 99.8 7.8E-21 2.7E-25 140.0 11.7 95 38-132 22-124 (153)
16 1rsy_A Synaptotagmin I; calciu 99.8 5.9E-21 2E-25 140.5 10.1 95 38-132 37-138 (152)
17 2d8k_A Synaptotagmin VII; exoc 99.8 8.1E-21 2.8E-25 138.0 10.1 95 38-132 21-123 (141)
18 3f04_A Synaptotagmin-1; C2A, c 99.8 4.7E-21 1.6E-25 139.5 8.7 96 38-133 29-131 (143)
19 3fdw_A Synaptotagmin-like prot 99.8 1.5E-20 5.2E-25 137.6 11.5 97 38-134 18-124 (148)
20 2z0u_A WW domain-containing pr 99.8 4E-21 1.4E-25 142.1 7.7 94 38-131 38-141 (155)
21 1v27_A Regulating synaptic mem 99.8 7.9E-21 2.7E-25 137.8 7.9 94 38-131 16-121 (141)
22 2bwq_A Regulating synaptic mem 99.8 1.6E-20 5.5E-25 134.2 9.3 95 38-132 13-119 (129)
23 1ugk_A Synaptotagmin IV, KIAA1 99.8 3.6E-20 1.2E-24 134.1 10.7 96 38-133 17-121 (138)
24 2chd_A Rabphilin-3A, exophilin 99.8 2.3E-20 7.8E-25 135.7 9.5 96 38-133 24-129 (142)
25 3jzy_A Intersectin 2; C2 domai 99.8 2.5E-19 8.7E-24 155.2 17.5 123 39-194 383-507 (510)
26 2q3x_A Regulating synaptic mem 99.8 3.1E-20 1.1E-24 139.3 9.4 92 41-132 28-127 (171)
27 1tjx_A Similar to synaptotagmi 99.8 8.7E-20 3E-24 135.1 11.5 94 38-131 20-122 (159)
28 2cm5_A Rabphilin-3A; protein t 99.8 2.5E-20 8.5E-25 139.1 8.5 96 38-133 32-136 (166)
29 2r83_A Synaptotagmin-1; C2A-C2 99.8 1.4E-19 4.9E-24 145.7 13.1 95 38-132 14-115 (284)
30 1rh8_A Piccolo protein; beta-s 99.8 1.1E-20 3.9E-25 137.2 5.7 91 42-132 17-126 (142)
31 3n5a_A Synaptotagmin-7; calciu 99.8 5.6E-20 1.9E-24 132.7 8.7 96 38-133 11-115 (138)
32 1wfm_A Synaptotagmin XIII; C2 99.8 1E-19 3.4E-24 131.9 9.8 91 38-131 21-119 (138)
33 1w15_A Synaptotagmin IV; metal 99.8 4.8E-19 1.6E-23 130.3 12.6 92 38-129 25-125 (153)
34 2enp_A B/K protein; C2 type 1, 99.8 5.6E-20 1.9E-24 134.4 6.6 95 38-132 21-129 (147)
35 2dmg_A KIAA1228 protein; beta- 99.8 7.4E-20 2.5E-24 132.9 6.6 94 38-132 19-123 (142)
36 3nsj_A Perforin-1; pore formin 99.8 6E-18 2E-22 147.0 16.1 113 41-198 392-507 (540)
37 1dqv_A Synaptotagmin III; beta 99.8 1.4E-18 4.8E-23 141.0 10.9 89 38-126 15-110 (296)
38 3l9b_A Otoferlin; C2-domain, b 99.8 7.6E-17 2.6E-21 115.6 16.1 118 41-199 19-144 (144)
39 2cjt_A UNC-13 homolog A, MUNC1 99.7 4.8E-18 1.6E-22 122.0 9.2 86 42-132 4-90 (131)
40 2cjs_A UNC-13 homolog A, MUNC1 99.7 1.4E-17 4.8E-22 124.4 8.4 87 41-132 12-99 (167)
41 2r83_A Synaptotagmin-1; C2A-C2 99.7 5E-17 1.7E-21 130.7 10.6 95 38-132 145-248 (284)
42 1djx_A PLC-D1, phosphoinositid 99.7 1.4E-16 4.8E-21 140.9 14.3 92 41-132 495-596 (624)
43 1cjy_A CPLA2, protein (cytosol 99.7 1E-16 3.5E-21 143.4 8.6 93 40-133 15-115 (749)
44 3bxj_A RAS GTPase-activating p 99.6 1.5E-17 5E-22 143.4 0.1 89 41-133 9-105 (483)
45 1dqv_A Synaptotagmin III; beta 99.6 2.5E-16 8.7E-21 127.6 4.5 95 38-132 147-250 (296)
46 3pfq_A PKC-B, PKC-beta, protei 99.5 2.1E-14 7.1E-19 128.4 11.1 93 41-133 170-270 (674)
47 3qr0_A Phospholipase C-beta (P 99.4 1.4E-12 4.7E-17 117.9 13.3 85 42-133 649-744 (816)
48 3ohm_B 1-phosphatidylinositol- 99.4 7.8E-13 2.7E-17 120.2 11.5 85 42-133 724-818 (885)
49 1yrk_A NPKC-delta, protein kin 99.4 1.4E-11 4.7E-16 85.9 14.3 115 41-194 4-124 (126)
50 2zkm_X 1-phosphatidylinositol- 99.4 3.5E-12 1.2E-16 115.6 12.9 85 41-132 676-771 (799)
51 2enj_A NPKC-theta, protein kin 99.4 2.4E-11 8.1E-16 85.8 13.2 118 40-196 7-131 (138)
52 2yrb_A Protein fantom; beta sa 94.4 0.65 2.2E-05 33.4 10.3 92 39-133 14-119 (156)
53 2wxf_A Phosphatidylinositol-4, 94.0 0.3 1E-05 45.1 9.9 104 41-153 215-340 (940)
54 3hhm_A Phosphatidylinositol-4, 93.5 0.53 1.8E-05 44.0 10.4 106 41-154 353-472 (1091)
55 3l4c_A Dedicator of cytokinesi 92.8 2.1 7.2E-05 32.5 11.2 55 74-128 77-138 (220)
56 1e7u_A Phosphatidylinositol 3- 90.3 1.5 5.1E-05 40.6 9.5 106 42-154 217-347 (961)
57 2y3a_A Phosphatidylinositol-4, 83.1 1.7 5.9E-05 40.8 5.7 103 41-152 351-485 (1092)
No 1
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.94 E-value=4.2e-25 Score=159.68 Aligned_cols=127 Identities=21% Similarity=0.374 Sum_probs=112.2
Q ss_pred cccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCeEEeceeec-CCCCCeEeeeeEEEEeCCCCcEEEEEEecCCCCC
Q 028875 39 ETLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGKQKLKTRVIK-KDVNPEWNEDLTLSITDPNVPITLTVYDHDLFSK 116 (202)
Q Consensus 39 ~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~w~e~f~f~v~~~~~~L~i~V~d~~~~~~ 116 (202)
....|.|.|+|++|++|+..+ .+.+||||++++++.+++|++++ ++.||.|||+|.|.+......|.|+|||++.+++
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~ 85 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTE 85 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTT
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCC
Confidence 346799999999999999998 78999999999999899999998 8999999999999999866779999999999989
Q ss_pred CCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEec--ccceeeEEEEEEEE
Q 028875 117 DDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLR--NVECGELEIQLQWI 194 (202)
Q Consensus 117 d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~--~~~~G~i~l~l~~~ 194 (202)
|++||++.++|.++..... ..+.|++|. ....|+|+|.++|.
T Consensus 86 d~~lG~~~i~l~~l~~~~~------------------------------------~~~~w~~L~~~~~~~G~i~l~l~~~ 129 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEGS------------------------------------IPPTAYNVVKDEEYKGEIWVALSFK 129 (136)
T ss_dssp TCCSEEEEEESHHHHHHSE------------------------------------EEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CceEEEEEEEHHHhccCCC------------------------------------CCcEEEEeecCCccCEEEEEEEEEE
Confidence 9999999999999965421 347788885 34589999999999
Q ss_pred eCCCCCC
Q 028875 195 DLPGSKG 201 (202)
Q Consensus 195 ~~~~~~~ 201 (202)
+...+.|
T Consensus 130 p~~~~~g 136 (136)
T 1wfj_A 130 PSGPSSG 136 (136)
T ss_dssp ECCSCCC
T ss_pred eCCCCCC
Confidence 9988776
No 2
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.93 E-value=1.3e-24 Score=160.78 Aligned_cols=120 Identities=19% Similarity=0.329 Sum_probs=103.0
Q ss_pred ccccceEEEEEEEEeecCCCCC-C----------CCCCcEEEEEECCeE-EeceeecCCCCCeEeeeeEEEEeCCCCcEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-V----------RSSDPYVVVKMGKQK-LKTRVIKKDVNPEWNEDLTLSITDPNVPIT 105 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~----------~~~dpyv~v~~~~~~-~~T~~~~~t~~P~w~e~f~f~v~~~~~~L~ 105 (202)
+....|.|.|+|++|++|++++ . +.+||||++++++.+ .+|++++++.||.|||+|.|.+.. ...|.
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~ 102 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLE 102 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEE
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEE
Confidence 4457899999999999999887 2 568999999999765 699999999999999999999975 45799
Q ss_pred EEEEecCCCCCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEeccccee
Q 028875 106 LTVYDHDLFSKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNVECG 185 (202)
Q Consensus 106 i~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G 185 (202)
|+|||++.+++|++||++.|+|+++..+.. .+. ..+.|++|.. .|
T Consensus 103 ~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~--------------------------------~~~-~~~~W~~L~~--~G 147 (157)
T 2fk9_A 103 LAVFHETPLGYDHFVANCTLQFQELLRTTG--------------------------------ASD-TFEGWVDLEP--EG 147 (157)
T ss_dssp EEEEECCSSSSCEEEEEEEEEHHHHHHHHT--------------------------------TCS-EEEEEEECBS--SC
T ss_pred EEEEECCCCCCCCEEEEEEEEHHHhhcccC--------------------------------CCC-cccEEEECCC--Cc
Confidence 999999999999999999999999987520 011 4589999975 79
Q ss_pred eEEEEEEE
Q 028875 186 ELEIQLQW 193 (202)
Q Consensus 186 ~i~l~l~~ 193 (202)
+|+|+++|
T Consensus 148 ~i~l~l~~ 155 (157)
T 2fk9_A 148 KVFVVITL 155 (157)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999988
No 3
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.92 E-value=7.7e-24 Score=153.74 Aligned_cols=123 Identities=21% Similarity=0.383 Sum_probs=105.1
Q ss_pred ccceEEEEEEEEeecCCCCCCCCCCcEEEEEECCeEEeceeecCCCCCeEeeeeEEEEeCC----CCcEEEEEEecCCCC
Q 028875 40 TLLGLLRIRIKRGVNLAVRDVRSSDPYVVVKMGKQKLKTRVIKKDVNPEWNEDLTLSITDP----NVPITLTVYDHDLFS 115 (202)
Q Consensus 40 ~~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~w~e~f~f~v~~~----~~~L~i~V~d~~~~~ 115 (202)
...|.|.|+|++|++|+..+.+.+||||++++++++++|++++++.||.|||+|.|.+... ...|.|+|||++.++
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~ 83 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKFGKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIG 83 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSSSCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSS
T ss_pred CCCcEEEEEEEEeeCCCCCCCCCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCC
Confidence 3568999999999999988778899999999999999999999999999999999999753 356999999999999
Q ss_pred CCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEE---eccc----ceeeEE
Q 028875 116 KDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLR---LRNV----ECGELE 188 (202)
Q Consensus 116 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---l~~~----~~G~i~ 188 (202)
+|++||++.++|.++..+. ..+.|++ |.+. ..|+|+
T Consensus 84 ~~~~lG~~~i~l~~l~~~~-------------------------------------~~~~w~~l~~l~~~~~~~~~G~l~ 126 (140)
T 2dmh_A 84 QNKLIGTATVALKDLTGDQ-------------------------------------SRSLPYKLISLLNEKGQDTGATID 126 (140)
T ss_dssp SCCCCEEEEEEGGGTCSSS-------------------------------------CEEEEEEEEEEECTTCCEEEEEEE
T ss_pred CCceEEEEEEEHHHhccCC-------------------------------------CceeEEeeeeccCCCCCCCCCEEE
Confidence 9999999999998875432 2366766 5442 359999
Q ss_pred EEEEEEeCCCC
Q 028875 189 IQLQWIDLPGS 199 (202)
Q Consensus 189 l~l~~~~~~~~ 199 (202)
|+++|.+.++.
T Consensus 127 l~~~~~p~~~~ 137 (140)
T 2dmh_A 127 LVIGYDPPSGP 137 (140)
T ss_dssp EEEEECCCBSS
T ss_pred EEEEEECCCCC
Confidence 99999997753
No 4
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.91 E-value=6.5e-24 Score=153.60 Aligned_cols=119 Identities=18% Similarity=0.340 Sum_probs=101.6
Q ss_pred cceEEEEEEEEeecCCCCC-CCC-----------CCcEEEEEECCeE-EeceeecCCCCCeEeeeeEEEEeCCCCcEEEE
Q 028875 41 LLGLLRIRIKRGVNLAVRD-VRS-----------SDPYVVVKMGKQK-LKTRVIKKDVNPEWNEDLTLSITDPNVPITLT 107 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~-~~~-----------~dpyv~v~~~~~~-~~T~~~~~t~~P~w~e~f~f~v~~~~~~L~i~ 107 (202)
..|.|.|+|++|++|++.+ .+. +||||++++++.. .+|++++++.||.|||+|.|.+... ..|.|+
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~ 82 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELA 82 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEE
Confidence 5699999999999999887 433 9999999998765 5999999999999999999999765 779999
Q ss_pred EEecCCCCCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEecccceeeE
Q 028875 108 VYDHDLFSKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNVECGEL 187 (202)
Q Consensus 108 V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~i 187 (202)
|||++.+++|++||++.+++.++..... . ..+.|++|.. +|+|
T Consensus 83 V~d~d~~~~dd~iG~~~i~l~~l~~~~~----------------------------------~-~~~~w~~L~~--~G~i 125 (136)
T 1gmi_A 83 VFHDAPIGYDDFVANCTIQFEELLQNGS----------------------------------R-HFEDWIDLEP--EGKV 125 (136)
T ss_dssp EEECCSSSSCEEEEEEEEEHHHHTSTTC----------------------------------S-EEEEEEECBS--SCEE
T ss_pred EEeCCCCCCCCEEEEEEEEHHHhcccCC----------------------------------C-CccEEEEcCC--CeEE
Confidence 9999999899999999999998875321 1 3478999874 7999
Q ss_pred EEEEEEEeCC
Q 028875 188 EIQLQWIDLP 197 (202)
Q Consensus 188 ~l~l~~~~~~ 197 (202)
+|+++|..-.
T Consensus 126 ~l~l~~~~~~ 135 (136)
T 1gmi_A 126 YVIIDLSGSS 135 (136)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEecC
Confidence 9999997643
No 5
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.91 E-value=1.5e-24 Score=156.24 Aligned_cols=119 Identities=24% Similarity=0.460 Sum_probs=104.4
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCeEEeceeecCCCCCeEeeeeEEEEeCCCCcEEEEEEecCCCCC
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGKQKLKTRVIKKDVNPEWNEDLTLSITDPNVPITLTVYDHDLFSK 116 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~t~~P~w~e~f~f~v~~~~~~L~i~V~d~~~~~~ 116 (202)
+....|.|.|+|++|++|+..+ .+.+||||++++++.+++|++++++.||.|||+|.|.+.+....|.|+|||++.+++
T Consensus 8 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~ 87 (133)
T 2ep6_A 8 DVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKP 87 (133)
T ss_dssp SCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEE
T ss_pred ccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCC
Confidence 5567899999999999999998 789999999999999999999999999999999999998777779999999999988
Q ss_pred CCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEecc-----cceeeEEEEE
Q 028875 117 DDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRN-----VECGELEIQL 191 (202)
Q Consensus 117 d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~-----~~~G~i~l~l 191 (202)
+++||++.++|.++..+ + ..|++|.. ...|+|+|++
T Consensus 88 ~~~lG~~~i~l~~l~~~------------------------------------~---~~w~~L~~~~~~~~~~G~i~l~i 128 (133)
T 2ep6_A 88 PDFLGKVAIPLLSIRDG------------------------------------Q---PNCYVLKNKDLEQAFKGVIYLEM 128 (133)
T ss_dssp EEECCBCEEEGGGCCSS------------------------------------C---CEECCCBCSCTTSCCSSEEEEEE
T ss_pred CCeeEEEEEEHHHccCC------------------------------------C---ceEEEeecCCCCCccceEEEEEE
Confidence 99999999999877432 1 34777654 3579999999
Q ss_pred EEEe
Q 028875 192 QWID 195 (202)
Q Consensus 192 ~~~~ 195 (202)
+|+.
T Consensus 129 ~~~~ 132 (133)
T 2ep6_A 129 DLIY 132 (133)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9974
No 6
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.91 E-value=1.9e-23 Score=153.04 Aligned_cols=117 Identities=26% Similarity=0.428 Sum_probs=102.3
Q ss_pred cccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCeEEeceeecCCCCCeEeeeeEEEEeCCCCcEEEEEEecCCC---
Q 028875 39 ETLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGKQKLKTRVIKKDVNPEWNEDLTLSITDPNVPITLTVYDHDLF--- 114 (202)
Q Consensus 39 ~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~t~~P~w~e~f~f~v~~~~~~L~i~V~d~~~~--- 114 (202)
....|.|.|+|++|++|+..+ .+.+||||++++++.+++|++++++.||.|||+|.|.+......|.|+|||++..
T Consensus 13 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~ 92 (148)
T 3kwu_A 13 SKWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKS 92 (148)
T ss_dssp --CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHH
T ss_pred cccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccc
Confidence 345799999999999999998 8899999999999999999999999999999999999988777899999999986
Q ss_pred --------CCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEeccc----
Q 028875 115 --------SKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNV---- 182 (202)
Q Consensus 115 --------~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~---- 182 (202)
+.+++||++.++|.++.. ..+.|++|...
T Consensus 93 ~~~~~~~~~~~~~lG~~~i~l~~l~~---------------------------------------~~~~w~~L~~~~~~~ 133 (148)
T 3kwu_A 93 RVKQRFKRESDDFLGQTIIEVRTLSG---------------------------------------EMDVWYNLDKRTDKS 133 (148)
T ss_dssp HHHTTTSSCSSEEEEEEEEEGGGCCS---------------------------------------EEEEEEECBCSSTTC
T ss_pred cccccccCCCCccEEEEEEEHHHCcC---------------------------------------CCCEEEEcccCCCCC
Confidence 789999999999987721 23779998743
Q ss_pred -ceeeEEEEEEEE
Q 028875 183 -ECGELEIQLQWI 194 (202)
Q Consensus 183 -~~G~i~l~l~~~ 194 (202)
..|+|+|+++|.
T Consensus 134 ~~~G~i~l~l~~e 146 (148)
T 3kwu_A 134 AVSGAIRLHISVE 146 (148)
T ss_dssp CCCCEEEEEEEEE
T ss_pred CCceEEEEEEEEE
Confidence 469999999873
No 7
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.90 E-value=1.7e-23 Score=149.17 Aligned_cols=115 Identities=21% Similarity=0.397 Sum_probs=99.7
Q ss_pred ceEEEEEEEEeecCCCC---C-CCCCCcEEEEEECC---eEEeceeecCCCCCeEeeeeEEEEeCCC-CcEEEEEEecCC
Q 028875 42 LGLLRIRIKRGVNLAVR---D-VRSSDPYVVVKMGK---QKLKTRVIKKDVNPEWNEDLTLSITDPN-VPITLTVYDHDL 113 (202)
Q Consensus 42 ~g~L~v~v~~a~~L~~~---~-~~~~dpyv~v~~~~---~~~~T~~~~~t~~P~w~e~f~f~v~~~~-~~L~i~V~d~~~ 113 (202)
.|.|.|+|++|++|+.+ + .+.+||||++++++ .+++|++++++.||.|||+|.|.+.... ..|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 47899999999999985 4 68999999999984 7889999999999999999999996444 569999999998
Q ss_pred CCCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEecccceeeEEEEEEE
Q 028875 114 FSKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNVECGELEIQLQW 193 (202)
Q Consensus 114 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~i~l~l~~ 193 (202)
+ ++++||++.++|.++..+. ..+.|++|....+|+|+++++.
T Consensus 82 ~-~~~~iG~~~i~l~~l~~~~-------------------------------------~~~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 V-MDETLGTATFTVSSMKVGE-------------------------------------KKEVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp S-CCEEEEEEEEEGGGSCTTC-------------------------------------EEEEEEEETTTEEEEEEEEEEC
T ss_pred C-CCceeEEEEEEHHHccCCC-------------------------------------cEEEEEEcCCCceEEEEEEEEe
Confidence 8 5899999999998775432 4588999999888999988875
Q ss_pred E
Q 028875 194 I 194 (202)
Q Consensus 194 ~ 194 (202)
.
T Consensus 124 ~ 124 (126)
T 1rlw_A 124 A 124 (126)
T ss_dssp C
T ss_pred C
Confidence 4
No 8
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.90 E-value=2e-22 Score=151.65 Aligned_cols=125 Identities=25% Similarity=0.366 Sum_probs=104.4
Q ss_pred ccceEEEEEEEEeecCC-CCCCCCCCcEEEEEECCeEEeceeecCCCCCeEeeeeEEEEeCCCCcEEEEEEecCCCCCCC
Q 028875 40 TLLGLLRIRIKRGVNLA-VRDVRSSDPYVVVKMGKQKLKTRVIKKDVNPEWNEDLTLSITDPNVPITLTVYDHDLFSKDD 118 (202)
Q Consensus 40 ~~~g~L~v~v~~a~~L~-~~~~~~~dpyv~v~~~~~~~~T~~~~~t~~P~w~e~f~f~v~~~~~~L~i~V~d~~~~~~d~ 118 (202)
...+.|.|+|++|++|+ ..+.+.+||||++++++.+++|+++++++||+|||+|.|.+. ....|.|+|||++.++.|+
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd 111 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDV 111 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCE
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCc
Confidence 35788999999999999 444666999999999999999999999999999999999985 4677999999999999999
Q ss_pred ccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcE-EEEEEEEeccc-----ceeeEEEEEE
Q 028875 119 RMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKV-VQDLVLRLRNV-----ECGELEIQLQ 192 (202)
Q Consensus 119 ~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~l~~~-----~~G~i~l~l~ 192 (202)
+||++.++|.++..... +.. ....|++|... ..|+|++.|.
T Consensus 112 ~lG~~~i~l~~l~~~~~---------------------------------~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~ 158 (173)
T 2nq3_A 112 LLGTAALDIYETLKSNN---------------------------------MKLEEVVVTLQLGGDKEPTETIGDLSICLD 158 (173)
T ss_dssp EEEEEEEEHHHHHHHTT---------------------------------TEESSEEEEEEEEESSCTTSEEEEEEEEEE
T ss_pred eEEEEEEEHHHhcccCC---------------------------------CCcceeEEEEECccCCCCCcccEEEEEEEe
Confidence 99999999999987532 110 12668888764 4799999999
Q ss_pred EEeCCC
Q 028875 193 WIDLPG 198 (202)
Q Consensus 193 ~~~~~~ 198 (202)
++++..
T Consensus 159 ~l~~~~ 164 (173)
T 2nq3_A 159 GLQLES 164 (173)
T ss_dssp SEECC-
T ss_pred eeecch
Confidence 998853
No 9
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.89 E-value=6.8e-23 Score=154.50 Aligned_cols=127 Identities=23% Similarity=0.431 Sum_probs=97.2
Q ss_pred cccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC------eEEeceeecCCCCCeEeeeeEEEEeCCCCcEEEEEEec
Q 028875 39 ETLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGK------QKLKTRVIKKDVNPEWNEDLTLSITDPNVPITLTVYDH 111 (202)
Q Consensus 39 ~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~------~~~~T~~~~~t~~P~w~e~f~f~v~~~~~~L~i~V~d~ 111 (202)
....|.|.|+|++|++|+.++ .+.+||||++++.. .+++|++++++.||.|||+|.|.+......|.|+|||+
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 346799999999999999988 78999999999974 67899999999999999999999987667799999999
Q ss_pred CCCCCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEeccc-----ceee
Q 028875 112 DLFSKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNV-----ECGE 186 (202)
Q Consensus 112 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~-----~~G~ 186 (202)
+.++++++||++.++|.++...... . .......|++|... ..|+
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~---------~----------------------~~~~~~~w~~L~~~~~~~~~~G~ 132 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPR---------M----------------------ERPYTFKDFVLHPRSHKSRVKGY 132 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC-------------------------------------CCCCEEEECBCSSTTCCCCSE
T ss_pred CCCCCCcEEEEEEEEHHHccccCCc---------c----------------------cccccccEEEccccCCCCccCEE
Confidence 9999999999999999877543210 0 00001268888753 3799
Q ss_pred EEEEEEEEeC
Q 028875 187 LEIQLQWIDL 196 (202)
Q Consensus 187 i~l~l~~~~~ 196 (202)
|+|++.|++.
T Consensus 133 l~l~l~~~p~ 142 (176)
T 3m7f_B 133 LRLKMTYLPK 142 (176)
T ss_dssp EEEEEEECC-
T ss_pred EEEEEEEEeC
Confidence 9999999986
No 10
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.89 E-value=4.1e-23 Score=152.12 Aligned_cols=126 Identities=24% Similarity=0.442 Sum_probs=98.8
Q ss_pred cccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC------eEEeceeecCCCCCeEeeeeEEEEeCCCCcEEEEEEec
Q 028875 39 ETLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGK------QKLKTRVIKKDVNPEWNEDLTLSITDPNVPITLTVYDH 111 (202)
Q Consensus 39 ~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~------~~~~T~~~~~t~~P~w~e~f~f~v~~~~~~L~i~V~d~ 111 (202)
....+.|.|+|++|++|+..+ .+.+||||++++.. ..++|++++++.||.|||+|.|.+......|.|+|||+
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDE 95 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEEC
Confidence 456799999999999999988 78999999999973 57899999999999999999999987767799999999
Q ss_pred CCCCCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEeccc-----ceee
Q 028875 112 DLFSKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNV-----ECGE 186 (202)
Q Consensus 112 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~-----~~G~ 186 (202)
+.++++++||++.++|.++...... ...-+.+.|++|... ..|+
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~-------------------------------~~~~~~~~w~~L~~~~~~~~~~G~ 144 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPR-------------------------------LERPYTFKDFVLHPRSHKSRVKGY 144 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTT-------------------------------SCCCCCCEEEECBCSSTTCCCCSE
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCc-------------------------------ccccccccccccccccCCCCcceE
Confidence 9998999999999999877543210 000012468888543 4799
Q ss_pred EEEEEEEEe
Q 028875 187 LEIQLQWID 195 (202)
Q Consensus 187 i~l~l~~~~ 195 (202)
|+|+++|+|
T Consensus 145 i~l~l~~~P 153 (153)
T 3b7y_A 145 LRLKMTYLP 153 (153)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEEeC
Confidence 999999975
No 11
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.88 E-value=2e-21 Score=139.69 Aligned_cols=91 Identities=23% Similarity=0.419 Sum_probs=81.9
Q ss_pred ceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC--eEEeceeecCCCCCeEeeeeEEEEeCCCCcEEEEEEecCCCCC--
Q 028875 42 LGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGK--QKLKTRVIKKDVNPEWNEDLTLSITDPNVPITLTVYDHDLFSK-- 116 (202)
Q Consensus 42 ~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~--~~~~T~~~~~t~~P~w~e~f~f~v~~~~~~L~i~V~d~~~~~~-- 116 (202)
...|.|+|++|++|+.++ .+.+||||+++++. ..++|++++++.||.|||+|.|.+.... .|.|+|||++.+++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~ 82 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQ 82 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSST
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCC
Confidence 467999999999999998 78999999999974 7899999999999999999999998654 59999999999865
Q ss_pred -CCccEEEEEehHhHHHH
Q 028875 117 -DDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 117 -d~~lG~~~i~l~~l~~~ 133 (202)
|++||++.++++++...
T Consensus 83 ~d~~lG~~~i~l~~l~~~ 100 (132)
T 3pyc_A 83 GAGFLGCVRLLSNAISRL 100 (132)
T ss_dssp TTTEEEEEEECHHHHHHH
T ss_pred CCCceEEEEEeHHHhhcc
Confidence 89999999999998554
No 12
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=1.2e-21 Score=143.64 Aligned_cols=92 Identities=33% Similarity=0.544 Sum_probs=82.9
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC-----CeEEeceeecCCCCCeEeeeeEEEEeCC--CCcEEEEEEecC
Q 028875 41 LLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMG-----KQKLKTRVIKKDVNPEWNEDLTLSITDP--NVPITLTVYDHD 112 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~~~~T~~~~~t~~P~w~e~f~f~v~~~--~~~L~i~V~d~~ 112 (202)
..+.|.|+|++|++|+..+ .+.+||||++++. ..+++|++++++.||.|||+|.|.+... ...|.|+|||++
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d 108 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 108 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECC
Confidence 3578999999999999998 7889999999997 4678999999999999999999999764 356999999999
Q ss_pred CCCCCCccEEEEEehHhHHH
Q 028875 113 LFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 113 ~~~~d~~lG~~~i~l~~l~~ 132 (202)
.++++++||++.++|.++..
T Consensus 109 ~~~~~~~iG~~~i~l~~l~~ 128 (149)
T 1a25_A 109 LTSRNDFMGSLSFGISELQK 128 (149)
T ss_dssp SSSCCEEEEEEEEEHHHHTT
T ss_pred CCCCCCEEEEEEEEHHHhCc
Confidence 99899999999999998864
No 13
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.86 E-value=2.9e-21 Score=139.41 Aligned_cols=95 Identities=23% Similarity=0.319 Sum_probs=82.9
Q ss_pred ccccceEEEEEEEEeecCCCCCCCCCCcEEEEEE-----CCeEEeceeecCCCCCeEeeeeEEE-EeC---CCCcEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRDVRSSDPYVVVKM-----GKQKLKTRVIKKDVNPEWNEDLTLS-ITD---PNVPITLTV 108 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~w~e~f~f~-v~~---~~~~L~i~V 108 (202)
++...+.|.|+|++|++|+....+.+||||++++ ...+++|++++++.||.|||+|.|. +.. ....|.|+|
T Consensus 15 ~~~~~~~L~V~V~~a~~L~~~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V 94 (134)
T 2b3r_A 15 VSYRNGTLFIMVMHIKDLVTEDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSV 94 (134)
T ss_dssp EEEETTEEEEEEEEEECCCCTTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEE
T ss_pred EeecCCEEEEEEEEeeCCCCCCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEE
Confidence 4557799999999999999733789999999998 3567899999999999999999999 753 236799999
Q ss_pred EecCCCCCCCccEEEEEehHhHHH
Q 028875 109 YDHDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 109 ~d~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
||++.++++++||++.++|+++..
T Consensus 95 ~d~d~~~~~~~lG~~~i~l~~l~~ 118 (134)
T 2b3r_A 95 LSAESLRENFFLGGITLPLKDFNL 118 (134)
T ss_dssp EECCSSSCCEEEEEEEEEGGGSCT
T ss_pred EECCCCCCCcEEEEEEEEhhhccC
Confidence 999999899999999999988754
No 14
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.86 E-value=3.9e-21 Score=138.71 Aligned_cols=93 Identities=28% Similarity=0.543 Sum_probs=84.0
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCcEEEEEE-----CCeEEeceeecCCCCCeEeeeeEEEEeCCC--CcEEEEEEecC
Q 028875 41 LLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKM-----GKQKLKTRVIKKDVNPEWNEDLTLSITDPN--VPITLTVYDHD 112 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~w~e~f~f~v~~~~--~~L~i~V~d~~ 112 (202)
..+.|.|+|++|++|+..+ .+.+||||++++ ...+++|++++++.||.|||+|.|.+...+ ..|.|+|||++
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d 93 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWD 93 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECC
T ss_pred cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECC
Confidence 4689999999999999988 789999999999 467899999999999999999999987543 46999999999
Q ss_pred CCCCCCccEEEEEehHhHHHH
Q 028875 113 LFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 113 ~~~~d~~lG~~~i~l~~l~~~ 133 (202)
.++++++||++.++|+++...
T Consensus 94 ~~~~~~~iG~~~i~l~~l~~~ 114 (137)
T 3rdl_A 94 RTTRNDFMGSLSFGVSELMKM 114 (137)
T ss_dssp SSSCCEEEEEEEEEHHHHHHS
T ss_pred CCCCCceEEEEEEeHHHhccC
Confidence 999999999999999999763
No 15
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.85 E-value=7.8e-21 Score=140.05 Aligned_cols=95 Identities=20% Similarity=0.382 Sum_probs=84.5
Q ss_pred ccccceEEEEEEEEeecCCCCCCCCCCcEEEEEEC-----CeEEeceeecCCCCCeEeeeeEEEEe--CCCCcEEEEEEe
Q 028875 38 METLLGLLRIRIKRGVNLAVRDVRSSDPYVVVKMG-----KQKLKTRVIKKDVNPEWNEDLTLSIT--DPNVPITLTVYD 110 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~-----~~~~~T~~~~~t~~P~w~e~f~f~v~--~~~~~L~i~V~d 110 (202)
+.+..+.|.|+|++|++|+..+.+.+||||++.+. ..+++|++++++.||.|||+|.|.+. .....|.|+|||
T Consensus 22 y~~~~~~L~V~v~~a~~L~~~d~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d 101 (153)
T 3fbk_A 22 IDAQDRVLLLHIIEGKGLISKQPGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWN 101 (153)
T ss_dssp EEESSSEEEEEEEEEESCCCCSSSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEe
Confidence 67889999999999999999888889999999983 45789999999999999999999984 334569999999
Q ss_pred cCCCCC-CCccEEEEEehHhHHH
Q 028875 111 HDLFSK-DDRMGDAEFDIKTYIE 132 (202)
Q Consensus 111 ~~~~~~-d~~lG~~~i~l~~l~~ 132 (202)
++.+++ |++||++.++|.++..
T Consensus 102 ~d~~~~~d~~lG~~~i~l~~l~~ 124 (153)
T 3fbk_A 102 RASQSRQSGLIGCMSFGVKSLLT 124 (153)
T ss_dssp CCSSGGGCEEEEEEEEEHHHHTC
T ss_pred CCCCCCCCcEEEEEEEEHHHhcC
Confidence 999876 9999999999998863
No 16
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.84 E-value=5.9e-21 Score=140.48 Aligned_cols=95 Identities=32% Similarity=0.455 Sum_probs=84.7
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC---CeEEeceeecCCCCCeEeeeeEEEEeCC---CCcEEEEEEe
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMG---KQKLKTRVIKKDVNPEWNEDLTLSITDP---NVPITLTVYD 110 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~---~~~~~T~~~~~t~~P~w~e~f~f~v~~~---~~~L~i~V~d 110 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++. ..+++|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 37 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 116 (152)
T 1rsy_A 37 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 116 (152)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEE
Confidence 5667899999999999999998 7899999999994 5678999999999999999999988643 4669999999
Q ss_pred cCCCCCCCccEEEEEehHhHHH
Q 028875 111 HDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 111 ~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
++.++++++||++.++|.++..
T Consensus 117 ~d~~~~~~~iG~~~i~l~~l~~ 138 (152)
T 1rsy_A 117 FDRFSKHDIIGEFKVPMNTVDF 138 (152)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCC
T ss_pred CCCCCCCcEEEEEEEEchhccC
Confidence 9999899999999999987643
No 17
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=8.1e-21 Score=137.98 Aligned_cols=95 Identities=28% Similarity=0.464 Sum_probs=84.1
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC---CeEEeceeecCCCCCeEeeeeEEEEeC----CCCcEEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMG---KQKLKTRVIKKDVNPEWNEDLTLSITD----PNVPITLTVY 109 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~---~~~~~T~~~~~t~~P~w~e~f~f~v~~----~~~~L~i~V~ 109 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++. ..+++|++++++.||.|||+|.|.+.. ....|.|+||
T Consensus 21 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~ 100 (141)
T 2d8k_A 21 YNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVL 100 (141)
T ss_dssp ECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEE
Confidence 5667899999999999999998 7899999999994 468899999999999999999998532 2466999999
Q ss_pred ecCCCCCCCccEEEEEehHhHHH
Q 028875 110 DHDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 110 d~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
|++.++++++||++.++|.++..
T Consensus 101 d~d~~~~~~~iG~~~i~l~~l~~ 123 (141)
T 2d8k_A 101 DYDRFSRNDPIGEVSIPLNKVDL 123 (141)
T ss_dssp ECCSSSSCEEEEEEEEETTTSCT
T ss_pred ECCCCCCCcEEEEEEEEhhhhcC
Confidence 99999899999999999987754
No 18
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.84 E-value=4.7e-21 Score=139.49 Aligned_cols=96 Identities=31% Similarity=0.463 Sum_probs=85.4
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEE---CCeEEeceeecCCCCCeEeeeeEEEEeCC---CCcEEEEEEe
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKM---GKQKLKTRVIKKDVNPEWNEDLTLSITDP---NVPITLTVYD 110 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~---~~~~~~T~~~~~t~~P~w~e~f~f~v~~~---~~~L~i~V~d 110 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++ ...+++|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 29 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d 108 (143)
T 3f04_A 29 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYD 108 (143)
T ss_dssp EETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEe
Confidence 5667899999999999999988 789999999999 45688999999999999999999998643 3569999999
Q ss_pred cCCCCCCCccEEEEEehHhHHHH
Q 028875 111 HDLFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 111 ~~~~~~d~~lG~~~i~l~~l~~~ 133 (202)
++.++++++||++.++|.++..+
T Consensus 109 ~d~~~~~~~iG~~~i~l~~l~~~ 131 (143)
T 3f04_A 109 FDRFSKHDIIGEFKVPMNTVDFG 131 (143)
T ss_dssp CCSSSCCEEEEEEEEEGGGCCTT
T ss_pred CCCCCCCceEEEEEEEHHHccCC
Confidence 99999999999999999887543
No 19
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.84 E-value=1.5e-20 Score=137.63 Aligned_cols=97 Identities=26% Similarity=0.422 Sum_probs=86.4
Q ss_pred ccccceEEEEEEEEeecCCCCC--CCCCCcEEEEEEC-----CeEEeceeecCCCCCeEeeeeEEEEeCCC---CcEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD--VRSSDPYVVVKMG-----KQKLKTRVIKKDVNPEWNEDLTLSITDPN---VPITLT 107 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~--~~~~dpyv~v~~~-----~~~~~T~~~~~t~~P~w~e~f~f~v~~~~---~~L~i~ 107 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++. ..+++|++++++.||.|||+|.|.+...+ ..|.|+
T Consensus 18 y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~ 97 (148)
T 3fdw_A 18 YEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFS 97 (148)
T ss_dssp EETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEE
Confidence 5677899999999999999887 6789999999987 34889999999999999999999987643 349999
Q ss_pred EEecCCCCCCCccEEEEEehHhHHHHh
Q 028875 108 VYDHDLFSKDDRMGDAEFDIKTYIEAL 134 (202)
Q Consensus 108 V~d~~~~~~d~~lG~~~i~l~~l~~~~ 134 (202)
|||++.++++++||++.++|.++..+.
T Consensus 98 V~d~d~~~~~~~iG~~~i~l~~l~~~~ 124 (148)
T 3fdw_A 98 VWHHGRFGRNTFLGEAEIQMDSWKLDK 124 (148)
T ss_dssp EEEECGGGCEEEEEEEEEEHHHHHHHC
T ss_pred EEECCCCcCCcEEEEEEEEcccccccC
Confidence 999999989999999999999997753
No 20
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.84 E-value=4e-21 Score=142.06 Aligned_cols=94 Identities=16% Similarity=0.147 Sum_probs=84.6
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC------eEEeceeecCCCCCeEeeeeEEEEeCC---CCcEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGK------QKLKTRVIKKDVNPEWNEDLTLSITDP---NVPITLT 107 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~------~~~~T~~~~~t~~P~w~e~f~f~v~~~---~~~L~i~ 107 (202)
|.+..+.|.|+|++|++|++++ .+.+||||++++.. .+++|+++++++||+|||+|.|.+... ...|.|+
T Consensus 38 y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~ 117 (155)
T 2z0u_A 38 YDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVD 117 (155)
T ss_dssp EETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEE
T ss_pred EcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEE
Confidence 5677899999999999999998 88999999999964 378999999999999999999998643 3569999
Q ss_pred EEecCCCCCCCccEEEEEehHhHH
Q 028875 108 VYDHDLFSKDDRMGDAEFDIKTYI 131 (202)
Q Consensus 108 V~d~~~~~~d~~lG~~~i~l~~l~ 131 (202)
|||++.++++++||++.++|+++.
T Consensus 118 V~d~d~~~~~d~iG~~~i~l~~l~ 141 (155)
T 2z0u_A 118 VCTTDRSHLEECLGGAQISLAEVC 141 (155)
T ss_dssp EEEECTTSCEEEEEEEEEECTTSC
T ss_pred EEECCCCCCCcEEEEEEEEHHHcc
Confidence 999999999999999999998774
No 21
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.83 E-value=7.9e-21 Score=137.76 Aligned_cols=94 Identities=22% Similarity=0.454 Sum_probs=82.4
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEE-----CCeEEeceeecCCCCCeEeeeeEEEEeC-C---CCcEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKM-----GKQKLKTRVIKKDVNPEWNEDLTLSITD-P---NVPITLT 107 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~w~e~f~f~v~~-~---~~~L~i~ 107 (202)
+.+..+.|.|+|++|++|+.++ .+.+||||++++ ...+++|++++++.||.|||+|.|.+.. . ...|.|+
T Consensus 16 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 95 (141)
T 1v27_A 16 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 95 (141)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEE
T ss_pred EeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEE
Confidence 5667799999999999999998 788999999998 3568899999999999999999999532 2 3569999
Q ss_pred EEecCCCCC--CCccEEEEEehHhHH
Q 028875 108 VYDHDLFSK--DDRMGDAEFDIKTYI 131 (202)
Q Consensus 108 V~d~~~~~~--d~~lG~~~i~l~~l~ 131 (202)
|||++.+++ +++||++.++|.++.
T Consensus 96 V~d~d~~~~~~~~~lG~~~i~l~~l~ 121 (141)
T 1v27_A 96 LWDQARVREEESEFLGEILIELETAL 121 (141)
T ss_dssp EEEBCSSSSCCBCCCEEEEEEGGGCC
T ss_pred EEECCCCcCCCCceEEEEEEEccccC
Confidence 999999976 999999999998764
No 22
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=1.6e-20 Score=134.19 Aligned_cols=95 Identities=22% Similarity=0.439 Sum_probs=78.9
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEE-----CCeEEeceeecCCCCCeEeeeeEEEEeC----CCCcEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKM-----GKQKLKTRVIKKDVNPEWNEDLTLSITD----PNVPITLT 107 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~w~e~f~f~v~~----~~~~L~i~ 107 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++ +..+++|++++++.||.|||+|.|.+.. ....|.|+
T Consensus 13 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~ 92 (129)
T 2bwq_A 13 FDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEIT 92 (129)
T ss_dssp EETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEE
T ss_pred EccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEE
Confidence 5667799999999999999988 788999999999 3578999999999999999999999532 23569999
Q ss_pred EEecCCCCC--CCccEEEEEehHhHHH
Q 028875 108 VYDHDLFSK--DDRMGDAEFDIKTYIE 132 (202)
Q Consensus 108 V~d~~~~~~--d~~lG~~~i~l~~l~~ 132 (202)
|||++.+++ +++||++.++|.++..
T Consensus 93 V~d~d~~~~~~~~~lG~~~i~l~~l~~ 119 (129)
T 2bwq_A 93 LWDQARVREEESEFLGEILIELETALL 119 (129)
T ss_dssp EEEC-------CEEEEEEEEEGGGCCC
T ss_pred EEECCcCcCcCCceeEEEEEEccccCC
Confidence 999999876 9999999999987643
No 23
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.83 E-value=3.6e-20 Score=134.07 Aligned_cols=96 Identities=27% Similarity=0.453 Sum_probs=84.4
Q ss_pred ccccceEEEEEEEEeecCCCCC-C-CCCCcEEEEEEC---CeEEeceeecCCCCCeEeeeeEEE-EeCC---CCcEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-V-RSSDPYVVVKMG---KQKLKTRVIKKDVNPEWNEDLTLS-ITDP---NVPITLTV 108 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~-~~~dpyv~v~~~---~~~~~T~~~~~t~~P~w~e~f~f~-v~~~---~~~L~i~V 108 (202)
+.+..+.|.|+|++|++|+.++ . +.+||||++++. ..+++|++++++.||.|||+|.|. +... ...|.|+|
T Consensus 17 y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V 96 (138)
T 1ugk_A 17 YNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTI 96 (138)
T ss_dssp EEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEE
Confidence 5677899999999999999988 4 789999999996 478999999999999999999996 6543 24699999
Q ss_pred EecCCCCCCCccEEEEEehHhHHHH
Q 028875 109 YDHDLFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 109 ~d~~~~~~d~~lG~~~i~l~~l~~~ 133 (202)
||++.++++++||++.++|.++..+
T Consensus 97 ~d~d~~~~~~~lG~~~i~l~~l~~~ 121 (138)
T 1ugk_A 97 LSFDRFSRDDIIGEVLIPLSGIELS 121 (138)
T ss_dssp EEECSSCCCCCCEEEEEECTTCCCT
T ss_pred EECCCCCCCcEEEEEEEehhHccCC
Confidence 9999999999999999999877543
No 24
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.83 E-value=2.3e-20 Score=135.69 Aligned_cols=96 Identities=28% Similarity=0.484 Sum_probs=85.0
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC-----eEEeceeecCCCCCeEeeeeEEE-EeCC---CCcEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGK-----QKLKTRVIKKDVNPEWNEDLTLS-ITDP---NVPITLT 107 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~w~e~f~f~-v~~~---~~~L~i~ 107 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++.. .+++|++++++.||.|||+|.|. +... ...|.|+
T Consensus 24 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~ 103 (142)
T 2chd_A 24 YDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRIS 103 (142)
T ss_dssp EEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEE
T ss_pred EeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEE
Confidence 5678899999999999999998 78999999999974 68999999999999999999998 5432 2569999
Q ss_pred EEecCCCCCCCccEEEEEehHhHHHH
Q 028875 108 VYDHDLFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 108 V~d~~~~~~d~~lG~~~i~l~~l~~~ 133 (202)
|||++.++++++||++.++|.++..+
T Consensus 104 V~d~d~~~~d~~iG~~~i~l~~l~~~ 129 (142)
T 2chd_A 104 VCDEDKFGHNEFIGETRFSLKKLKAN 129 (142)
T ss_dssp EEEECTTSCEEEEEEEEEEGGGCCTT
T ss_pred EEECCCCCCCcEEEEEEEEHHHcCCC
Confidence 99999998999999999999887653
No 25
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.83 E-value=2.5e-19 Score=155.15 Aligned_cols=123 Identities=28% Similarity=0.441 Sum_probs=105.6
Q ss_pred cccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCeEEeceeecCCCCCeEeeeeEEEEeCCC-CcEEEEEEecCCCCC
Q 028875 39 ETLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGKQKLKTRVIKKDVNPEWNEDLTLSITDPN-VPITLTVYDHDLFSK 116 (202)
Q Consensus 39 ~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~t~~P~w~e~f~f~v~~~~-~~L~i~V~d~~~~~~ 116 (202)
....|.|.|+|++|++|++.+ .|.+||||++.+++.+++|++++++.||.|||+|.|.+.... ..|.|+|||++.+++
T Consensus 383 ~~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~ 462 (510)
T 3jzy_A 383 TSGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSP 462 (510)
T ss_dssp ---CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSS
T ss_pred CCCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCC
Confidence 346789999999999999998 889999999999999999999999999999999999997665 459999999999999
Q ss_pred CCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEecccceeeEEEEEEEE
Q 028875 117 DDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNVECGELEIQLQWI 194 (202)
Q Consensus 117 d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~i~l~l~~~ 194 (202)
|++||++.++++++..+... .+ ....|+++.+..+|+|+|+++..
T Consensus 463 ~d~lG~~~~~l~~l~~~~~~-------------------------------~~--~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 463 DDFLGRTEIPVAKIRTEQES-------------------------------KG--PMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CCEEEEEEEEHHHHHHHHHH-------------------------------HC--SCCEEEECBSSSSCEEEEEEEEE
T ss_pred CCceEEEEEEHHHhccccCC-------------------------------CC--ceeeeecCCCCCCceEEEEEEEE
Confidence 99999999999999875420 01 12679999999999999988764
No 26
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.82 E-value=3.1e-20 Score=139.32 Aligned_cols=92 Identities=22% Similarity=0.321 Sum_probs=82.1
Q ss_pred cceEEEEEEEEeecCCCCC--CCCCCcEEEEEECC-----eEEeceeecCCCCCeEeeeeEEEEeCCCCcEEEEEE-ecC
Q 028875 41 LLGLLRIRIKRGVNLAVRD--VRSSDPYVVVKMGK-----QKLKTRVIKKDVNPEWNEDLTLSITDPNVPITLTVY-DHD 112 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~--~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~w~e~f~f~v~~~~~~L~i~V~-d~~ 112 (202)
..+.|.|+|++|++|+.++ .+.+||||++++.. .+++|++++++.||+|||+|.|.+......|.|+|| |++
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYG 107 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECS
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCC
Confidence 5789999999999999988 48999999999863 378999999999999999999999766667999999 999
Q ss_pred CCCCCCccEEEEEehHhHHH
Q 028875 113 LFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 113 ~~~~d~~lG~~~i~l~~l~~ 132 (202)
.++++++||++.++|+++..
T Consensus 108 ~~~~d~~iG~~~i~l~~l~~ 127 (171)
T 2q3x_A 108 RMDHKCFMGVAQILLEELDL 127 (171)
T ss_dssp TTCSSEEEEEEEECGGGSCT
T ss_pred CCCCCCEEEEEEEEHHHccc
Confidence 99999999999999987753
No 27
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.82 E-value=8.7e-20 Score=135.14 Aligned_cols=94 Identities=29% Similarity=0.385 Sum_probs=83.5
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC-----eEEeceeecCCCCCeEeeeeEEEEeCCC---CcEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGK-----QKLKTRVIKKDVNPEWNEDLTLSITDPN---VPITLTV 108 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~w~e~f~f~v~~~~---~~L~i~V 108 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++.. .+++|++++++.||.|||+|.|.+...+ ..|.|+|
T Consensus 20 y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 99 (159)
T 1tjx_A 20 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 99 (159)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEE
Confidence 5667899999999999999998 78899999999862 4789999999999999999999986542 4599999
Q ss_pred EecCCCCCCCccEEEEEehHhHH
Q 028875 109 YDHDLFSKDDRMGDAEFDIKTYI 131 (202)
Q Consensus 109 ~d~~~~~~d~~lG~~~i~l~~l~ 131 (202)
||++.++++++||++.+++..+.
T Consensus 100 ~d~d~~~~~~~iG~~~i~l~~~~ 122 (159)
T 1tjx_A 100 LDYDKIGKNDAIGKVFVGYNSTG 122 (159)
T ss_dssp EECCSSSCCEEEEEEEEETTCCH
T ss_pred EECCCCCCCceEEEEEECCCCCC
Confidence 99999989999999999998654
No 28
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.82 E-value=2.5e-20 Score=139.09 Aligned_cols=96 Identities=32% Similarity=0.451 Sum_probs=85.7
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC-----eEEeceeecCCCCCeEeeeeEEEEeCC---CCcEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGK-----QKLKTRVIKKDVNPEWNEDLTLSITDP---NVPITLTV 108 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~w~e~f~f~v~~~---~~~L~i~V 108 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++.. .+++|++++++.||.|||+|.|.+... ...|.|+|
T Consensus 32 y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 111 (166)
T 2cm5_A 32 YSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISV 111 (166)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEE
T ss_pred EECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEE
Confidence 5667899999999999999998 78999999999974 688999999999999999999999653 34699999
Q ss_pred EecCCCCCCCccEEEEEehHhHHHH
Q 028875 109 YDHDLFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 109 ~d~~~~~~d~~lG~~~i~l~~l~~~ 133 (202)
||++.++++++||++.+++.++...
T Consensus 112 ~d~d~~~~~~~iG~~~i~l~~~~~~ 136 (166)
T 2cm5_A 112 WDYDIGKSNDYIGGCQLGISAKGER 136 (166)
T ss_dssp EECCSSSCCEEEEEEEEETTCCHHH
T ss_pred EECCCCCCCcEEEeEEEecccCCch
Confidence 9999998999999999999876543
No 29
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.82 E-value=1.4e-19 Score=145.66 Aligned_cols=95 Identities=32% Similarity=0.455 Sum_probs=84.7
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC---CeEEeceeecCCCCCeEeeeeEEEEeCC---CCcEEEEEEe
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMG---KQKLKTRVIKKDVNPEWNEDLTLSITDP---NVPITLTVYD 110 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~---~~~~~T~~~~~t~~P~w~e~f~f~v~~~---~~~L~i~V~d 110 (202)
|.+..+.|.|+|++|++|+.++ .+.+||||++++. ..+++|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 14 y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d 93 (284)
T 2r83_A 14 YDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYD 93 (284)
T ss_dssp EETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEE
T ss_pred EECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEE
Confidence 5667899999999999999998 7899999999996 3578999999999999999999998753 3569999999
Q ss_pred cCCCCCCCccEEEEEehHhHHH
Q 028875 111 HDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 111 ~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
++.++++++||++.++|.++..
T Consensus 94 ~d~~~~~~~lG~~~i~l~~l~~ 115 (284)
T 2r83_A 94 FDRFSKHDIIGEFKVPMNTVDF 115 (284)
T ss_dssp CCSSSCCCEEEEEEEEGGGCCC
T ss_pred CCCCCCCceeEEEEEcchhccc
Confidence 9999899999999999987754
No 30
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.81 E-value=1.1e-20 Score=137.21 Aligned_cols=91 Identities=35% Similarity=0.541 Sum_probs=80.6
Q ss_pred ceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCe--------------EEeceeecCCCCCeEeeeeEEE-EeC---CCC
Q 028875 42 LGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGKQ--------------KLKTRVIKKDVNPEWNEDLTLS-ITD---PNV 102 (202)
Q Consensus 42 ~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~--------------~~~T~~~~~t~~P~w~e~f~f~-v~~---~~~ 102 (202)
.+.|.|+|++|++|+.++ .+.+||||++++... +++|++++++.||.|||+|.|. +.. ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 689999999999999998 889999999999852 4799999999999999999997 542 245
Q ss_pred cEEEEEEecCCCCCCCccEEEEEehHhHHH
Q 028875 103 PITLTVYDHDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 103 ~L~i~V~d~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
.|.|+|||++.++++++||++.++|.++..
T Consensus 97 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 126 (142)
T 1rh8_A 97 TLEVTVWDYDRFSSNDFLGEVLIDLSSTSH 126 (142)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEETTSCGG
T ss_pred EEEEEEEECCCCCCCceEEEEEEecccccc
Confidence 799999999999899999999999987754
No 31
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.81 E-value=5.6e-20 Score=132.70 Aligned_cols=96 Identities=29% Similarity=0.388 Sum_probs=85.2
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEECC-----eEEeceeecCCCCCeEeeeeEEEEeCCC---CcEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGK-----QKLKTRVIKKDVNPEWNEDLTLSITDPN---VPITLTV 108 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~-----~~~~T~~~~~t~~P~w~e~f~f~v~~~~---~~L~i~V 108 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++.. .+++|++++++.||.|||+|.|.+.... ..|.|+|
T Consensus 11 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V 90 (138)
T 3n5a_A 11 YNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITV 90 (138)
T ss_dssp EETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEE
T ss_pred EcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEE
Confidence 5667899999999999999988 78899999999873 4789999999999999999999987544 4599999
Q ss_pred EecCCCCCCCccEEEEEehHhHHHH
Q 028875 109 YDHDLFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 109 ~d~~~~~~d~~lG~~~i~l~~l~~~ 133 (202)
||++.++++++||++.+++.++..+
T Consensus 91 ~d~~~~~~~~~lG~~~i~l~~~~~~ 115 (138)
T 3n5a_A 91 MDKDKLSRNDVIGKIYLSWKSGPGE 115 (138)
T ss_dssp EECCSSSCCEEEEEEEESSSSCHHH
T ss_pred EECCCCCCCcEEEEEEEccccCChH
Confidence 9999999999999999999876544
No 32
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.81 E-value=1e-19 Score=131.86 Aligned_cols=91 Identities=20% Similarity=0.312 Sum_probs=79.0
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC---C-eEEeceeecCCCCCeEeeeeEEEEeCC---CCcEEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMG---K-QKLKTRVIKKDVNPEWNEDLTLSITDP---NVPITLTVY 109 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~---~-~~~~T~~~~~t~~P~w~e~f~f~v~~~---~~~L~i~V~ 109 (202)
|....+.|.|+|++|++ ++ .+.+||||++++. + .+++|+++++++||.|||+|.|.+... ...|.|+||
T Consensus 21 y~~~~~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~ 97 (138)
T 1wfm_A 21 YDCQKAELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLR 97 (138)
T ss_dssp EETTTTEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEE
T ss_pred EeCCCCEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEE
Confidence 56678999999999993 45 7899999999994 2 367999999999999999999998754 346999999
Q ss_pred ecCCCCCCCccEEEEEehHhHH
Q 028875 110 DHDLFSKDDRMGDAEFDIKTYI 131 (202)
Q Consensus 110 d~~~~~~d~~lG~~~i~l~~l~ 131 (202)
|++.++++++||++.++|.++.
T Consensus 98 d~d~~~~dd~lG~~~i~l~~l~ 119 (138)
T 1wfm_A 98 TCDRFSRHSVAGELRLGLDGTS 119 (138)
T ss_dssp ECCSSCTTSCSEEEEEESSSSS
T ss_pred ECCCCCCCcEEEEEEEEccccc
Confidence 9999999999999999998763
No 33
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.80 E-value=4.8e-19 Score=130.27 Aligned_cols=92 Identities=25% Similarity=0.330 Sum_probs=78.2
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC--Ce---EEeceeecCCCCCeEeeeeEEEEeCCC---CcEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMG--KQ---KLKTRVIKKDVNPEWNEDLTLSITDPN---VPITLTV 108 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~--~~---~~~T~~~~~t~~P~w~e~f~f~v~~~~---~~L~i~V 108 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++. +. +++|++++++.||.|||+|.|.+.... ..|.|+|
T Consensus 25 y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V 104 (153)
T 1w15_A 25 YQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLV 104 (153)
T ss_dssp EETTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEE
T ss_pred EcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEE
Confidence 5677899999999999999988 7889999999994 33 679999999999999999999987653 4599999
Q ss_pred EecCCCCCCCccEEEEEehHh
Q 028875 109 YDHDLFSKDDRMGDAEFDIKT 129 (202)
Q Consensus 109 ~d~~~~~~d~~lG~~~i~l~~ 129 (202)
||++.++++++||++.+++..
T Consensus 105 ~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 105 LDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EECCTTSCCEEEEEEEESTTC
T ss_pred EeCCCCCCCcEEEEEEECCCC
Confidence 999999899999999999987
No 34
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=5.6e-20 Score=134.40 Aligned_cols=95 Identities=25% Similarity=0.317 Sum_probs=82.9
Q ss_pred ccccceEEEEEEEEeecCCCC-C-------CCCCCcEEEEEEC---CeEEeceeecCCCCCeEeeeeEEEEeCC---CCc
Q 028875 38 METLLGLLRIRIKRGVNLAVR-D-------VRSSDPYVVVKMG---KQKLKTRVIKKDVNPEWNEDLTLSITDP---NVP 103 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~-~-------~~~~dpyv~v~~~---~~~~~T~~~~~t~~P~w~e~f~f~v~~~---~~~ 103 (202)
|.+..+.|.|+|++|++|+.. + .+.+||||++++. ..+++|++++++.||.|||+|.|.+... ...
T Consensus 21 y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 100 (147)
T 2enp_A 21 YDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRT 100 (147)
T ss_dssp EETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSE
T ss_pred EcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCE
Confidence 667889999999999999984 3 3579999999986 4678999999999999999999998642 257
Q ss_pred EEEEEEecCCCCCCCccEEEEEehHhHHH
Q 028875 104 ITLTVYDHDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 104 L~i~V~d~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
|.|+|||++.++++++||++.++|.++..
T Consensus 101 L~~~V~d~d~~~~~~~iG~~~i~l~~l~~ 129 (147)
T 2enp_A 101 LLLTVVDFDKFSRHCVIGKVSVPLCEVDL 129 (147)
T ss_dssp EEEEEECCSTTCCSCCCEEEEEETTTSCT
T ss_pred EEEEEEECCCCcCCcEEEEEEEechhcCC
Confidence 99999999999999999999999987754
No 35
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.79 E-value=7.4e-20 Score=132.95 Aligned_cols=94 Identities=21% Similarity=0.268 Sum_probs=81.2
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC-----CeEEeceeecCCCCCeEeeeeEEEEeCC---CCcEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMG-----KQKLKTRVIKKDVNPEWNEDLTLSITDP---NVPITLTV 108 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~-----~~~~~T~~~~~t~~P~w~e~f~f~v~~~---~~~L~i~V 108 (202)
+.+..+.|.|+|++|++|+.++ .+ +||||++++. ..+++|++++++.||.|||+|.|.+... ...|.|+|
T Consensus 19 y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 97 (142)
T 2dmg_A 19 HSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAV 97 (142)
T ss_dssp EETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEE
Confidence 5667899999999999999998 77 9999999984 2678999999999999999999998642 24799999
Q ss_pred EecCCCCC--CCccEEEEEehHhHHH
Q 028875 109 YDHDLFSK--DDRMGDAEFDIKTYIE 132 (202)
Q Consensus 109 ~d~~~~~~--d~~lG~~~i~l~~l~~ 132 (202)
||++.++. +++||++.++|.++..
T Consensus 98 ~d~d~~~~~~~~~iG~~~i~l~~~~~ 123 (142)
T 2dmg_A 98 KNSGGFLSKDKGLLGKVLVALASEEL 123 (142)
T ss_dssp EECCCSSCCSCCCCEEEEEECCCSTT
T ss_pred EECCCccccCCcEEEEEEEecccccc
Confidence 99998753 5799999999987654
No 36
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.77 E-value=6e-18 Score=146.99 Aligned_cols=113 Identities=24% Similarity=0.385 Sum_probs=97.5
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCeEEeceeecCCCCCeEeeeeEEEEeC--CCCcEEEEEEecCCCCCC
Q 028875 41 LLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGKQKLKTRVIKKDVNPEWNEDLTLSITD--PNVPITLTVYDHDLFSKD 117 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~~~~T~~~~~t~~P~w~e~f~f~v~~--~~~~L~i~V~d~~~~~~d 117 (202)
..+.|.|+|++|++|+. | .+.+||||++++++++++|+++++++||+|||+|.|.+.. ....|.|+|||+|..+.|
T Consensus 392 ~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~d 470 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDD 470 (540)
T ss_dssp TEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCC
T ss_pred cccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCC
Confidence 37899999999999998 8 8899999999999999999999999999999999998643 456799999999999899
Q ss_pred CccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEecccceeeEEEEEEEEeCC
Q 028875 118 DRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNVECGELEIQLQWIDLP 197 (202)
Q Consensus 118 ~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~i~l~l~~~~~~ 197 (202)
|+||++.++|.. | ..+.|+.|. .|.|++.++..=.|
T Consensus 471 D~LG~~~~~L~~---------------------------------------g--~~~~~~~l~---~G~l~~~~~~~c~p 506 (540)
T 3nsj_A 471 DLLGSCDRSPHS---------------------------------------G--FHEVTCELN---HGRVKFSYHAKCLP 506 (540)
T ss_dssp EEEEEEEECCCS---------------------------------------E--EEEEEEECS---SSEEEEEEEEEECT
T ss_pred CEEEEEEEEeeC---------------------------------------C--cEEEEEEcC---CeEEEEEEEEEECC
Confidence 999999999851 2 236788764 58999998877666
Q ss_pred C
Q 028875 198 G 198 (202)
Q Consensus 198 ~ 198 (202)
.
T Consensus 507 ~ 507 (540)
T 3nsj_A 507 H 507 (540)
T ss_dssp T
T ss_pred C
Confidence 4
No 37
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.77 E-value=1.4e-18 Score=140.99 Aligned_cols=89 Identities=33% Similarity=0.527 Sum_probs=80.3
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEE---CCeEEeceeecCCCCCeEeeeeEEEEeCC---CCcEEEEEEe
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKM---GKQKLKTRVIKKDVNPEWNEDLTLSITDP---NVPITLTVYD 110 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~---~~~~~~T~~~~~t~~P~w~e~f~f~v~~~---~~~L~i~V~d 110 (202)
|....+.|.|+|++|++|+.++ .+.+||||++++ +..+++|++++++.||.|||+|.|.+... ...|.|+|||
T Consensus 15 y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d 94 (296)
T 1dqv_A 15 YLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYD 94 (296)
T ss_dssp CCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEE
T ss_pred EeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEE
Confidence 5667899999999999999998 889999999999 46788999999999999999999998643 2469999999
Q ss_pred cCCCCCCCccEEEEEe
Q 028875 111 HDLFSKDDRMGDAEFD 126 (202)
Q Consensus 111 ~~~~~~d~~lG~~~i~ 126 (202)
++.++++++||++.++
T Consensus 95 ~d~~~~~~~iG~~~i~ 110 (296)
T 1dqv_A 95 FDRFSRHDLIGQVVLD 110 (296)
T ss_dssp CCSSSCCCEEEEEECC
T ss_pred cCCCCCCceEEEEEec
Confidence 9999999999999995
No 38
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.75 E-value=7.6e-17 Score=115.60 Aligned_cols=118 Identities=13% Similarity=0.230 Sum_probs=98.4
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCcEEEEEECCeEEeceeec-CCCCCeEeeeeEEEEeCC---CCcEEEEEEecCCCCC
Q 028875 41 LLGLLRIRIKRGVNLAVRDVRSSDPYVVVKMGKQKLKTRVIK-KDVNPEWNEDLTLSITDP---NVPITLTVYDHDLFSK 116 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~w~e~f~f~v~~~---~~~L~i~V~d~~~~~~ 116 (202)
..--|+|.|.+|.+|+ +.+|||+++.+-+.+++|+++. ++.||.|||.|+|++..+ ++.|.|.|+|++.+++
T Consensus 19 ~~msL~V~l~~a~~Lp----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~ 94 (144)
T 3l9b_A 19 SHMALIVHLKTVSELR----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFS 94 (144)
T ss_dssp CCEEEEEEEEEEESCC----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSC
T ss_pred CcEEEEEEEEEecCCC----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccC
Confidence 3456899999999998 4789999999999999999998 689999999999999753 3569999999999999
Q ss_pred CCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEecccc----eeeEEEEEE
Q 028875 117 DDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNVE----CGELEIQLQ 192 (202)
Q Consensus 117 d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~----~G~i~l~l~ 192 (202)
+++||++.++|.++.....+ ..+.+|-+.+ .+.|.+.+.
T Consensus 95 nrlIG~~~i~Lq~lv~~~~l-------------------------------------~l~~~LvD~n~~~~~a~I~l~l~ 137 (144)
T 3l9b_A 95 NKLIGTFRMVLQKVVEENRV-------------------------------------EVSDTLIDDNNAIIKTSLSMEVR 137 (144)
T ss_dssp CEEEEEEEEESHHHHHHSEE-------------------------------------EEEEEEECTTSCEEEEEEEEEEE
T ss_pred CCEEEEEEEEhHHhccCCeE-------------------------------------EEeecccCCCCCccccEEEEEEE
Confidence 99999999999999887431 2233333322 489999999
Q ss_pred EEeCCCC
Q 028875 193 WIDLPGS 199 (202)
Q Consensus 193 ~~~~~~~ 199 (202)
|.+.+|.
T Consensus 138 Y~pp~g~ 144 (144)
T 3l9b_A 138 YQAADGT 144 (144)
T ss_dssp EEETTCC
T ss_pred ecCCCCC
Confidence 9998763
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.75 E-value=4.8e-18 Score=122.02 Aligned_cols=86 Identities=21% Similarity=0.408 Sum_probs=72.5
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCcEEEEEECCeEEeceeec-CCCCCeEeeeeEEEEeCCCCcEEEEEEecCCCCCCCcc
Q 028875 42 LGLLRIRIKRGVNLAVRDVRSSDPYVVVKMGKQKLKTRVIK-KDVNPEWNEDLTLSITDPNVPITLTVYDHDLFSKDDRM 120 (202)
Q Consensus 42 ~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~w~e~f~f~v~~~~~~L~i~V~d~~~~~~d~~l 120 (202)
.+.|.|+|++|+++.. .+.+||||+++ . +..+|+++. ++.||.|||+|.|.+...+..|.|+|||++ +++|++|
T Consensus 4 ~~~L~V~V~~A~~l~~--~g~~DPYv~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~i 78 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA--QEKFNTYVTLK-V-QNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMV 78 (131)
T ss_dssp CEEEEEEEEEEECSSC--GGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEEEE
T ss_pred ceEEEEEEEEeECCCC--CCCcCeEEEEE-e-cCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCCeE
Confidence 4899999999998853 57899999999 3 333455444 689999999999999877777999999999 8899999
Q ss_pred EEEEEehHhHHH
Q 028875 121 GDAEFDIKTYIE 132 (202)
Q Consensus 121 G~~~i~l~~l~~ 132 (202)
|++.++|+++..
T Consensus 79 G~~~i~l~~l~~ 90 (131)
T 2cjt_A 79 GTVWIPLRTIRQ 90 (131)
T ss_dssp EEEEEEGGGSCB
T ss_pred EEEEEEHHHhhh
Confidence 999999988754
No 40
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.72 E-value=1.4e-17 Score=124.38 Aligned_cols=87 Identities=21% Similarity=0.415 Sum_probs=74.1
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCcEEEEEECCeEEeceeec-CCCCCeEeeeeEEEEeCCCCcEEEEEEecCCCCCCCc
Q 028875 41 LLGLLRIRIKRGVNLAVRDVRSSDPYVVVKMGKQKLKTRVIK-KDVNPEWNEDLTLSITDPNVPITLTVYDHDLFSKDDR 119 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~~~~T~~~~-~t~~P~w~e~f~f~v~~~~~~L~i~V~d~~~~~~d~~ 119 (202)
..+.|.|+|++|+++. ..+.+||||+++ .+.++|++++ ++.||.|||+|.|.+...+..|.|+|||++ +++|++
T Consensus 12 ~~~~L~V~V~~A~~l~--~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~ 86 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG--AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTM 86 (167)
T ss_dssp CCCEEEEEEEEEECSS--CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEE
T ss_pred ceEEEEEEEEEEECCC--CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCce
Confidence 4689999999999884 367899999999 2334566655 589999999999999877778999999999 779999
Q ss_pred cEEEEEehHhHHH
Q 028875 120 MGDAEFDIKTYIE 132 (202)
Q Consensus 120 lG~~~i~l~~l~~ 132 (202)
||++.|+|.++..
T Consensus 87 iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 87 VGTVWIPLRTIRQ 99 (167)
T ss_dssp EEEEEEEGGGSCB
T ss_pred EEEEEEEHHHhcc
Confidence 9999999998754
No 41
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=5e-17 Score=130.75 Aligned_cols=95 Identities=28% Similarity=0.372 Sum_probs=83.0
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC--C---eEEeceeecCCCCCeEeeeeEEEEeCCC---CcEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMG--K---QKLKTRVIKKDVNPEWNEDLTLSITDPN---VPITLTV 108 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~--~---~~~~T~~~~~t~~P~w~e~f~f~v~~~~---~~L~i~V 108 (202)
+.+..+.|.|+|++|++|+..+ .+.+||||++++. + .+++|++++++.||.|||+|.|.+...+ ..|.|+|
T Consensus 145 ~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V 224 (284)
T 2r83_A 145 YVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTV 224 (284)
T ss_dssp EETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEE
T ss_pred ecCcCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEE
Confidence 4456789999999999999988 7889999999985 2 4679999999999999999999997653 3599999
Q ss_pred EecCCCCCCCccEEEEEehHhHHH
Q 028875 109 YDHDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 109 ~d~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
||++.++++++||++.+++..+..
T Consensus 225 ~d~d~~~~~~~iG~~~i~l~~~~~ 248 (284)
T 2r83_A 225 LDYDKIGKNDAIGKVFVGYNSTGA 248 (284)
T ss_dssp EECCSSSCCCEEEEEEEETTCCHH
T ss_pred EeCCCCCCCcEEEEEEECCCCCCc
Confidence 999999999999999999987544
No 42
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.70 E-value=1.4e-16 Score=140.87 Aligned_cols=92 Identities=27% Similarity=0.426 Sum_probs=82.2
Q ss_pred cceEEEEEEEEeecCCCCC---CCCCCcEEEEEECC-----eEEeceeecCC-CCCeEeeeeEEEEeCCC-CcEEEEEEe
Q 028875 41 LLGLLRIRIKRGVNLAVRD---VRSSDPYVVVKMGK-----QKLKTRVIKKD-VNPEWNEDLTLSITDPN-VPITLTVYD 110 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~---~~~~dpyv~v~~~~-----~~~~T~~~~~t-~~P~w~e~f~f~v~~~~-~~L~i~V~d 110 (202)
..+.|.|+|++|++|+..+ .+.+||||++.+.+ .+++|++++++ .||+|||+|.|.+..++ ..|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 5689999999999999887 57899999999943 68899999998 99999999999998765 459999999
Q ss_pred cCCCCCCCccEEEEEehHhHHH
Q 028875 111 HDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 111 ~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
++.++++++||++.++|..+..
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~ 596 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQ 596 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCC
T ss_pred cCCCCCCceeEEEEEEHHHcCC
Confidence 9999999999999999987754
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.67 E-value=1e-16 Score=143.43 Aligned_cols=93 Identities=22% Similarity=0.457 Sum_probs=83.3
Q ss_pred ccceEEEEEEEEeecCCC---CC-CCCCCcEEEEEEC---CeEEeceeecCCCCCeEeeeeEEEEeCC-CCcEEEEEEec
Q 028875 40 TLLGLLRIRIKRGVNLAV---RD-VRSSDPYVVVKMG---KQKLKTRVIKKDVNPEWNEDLTLSITDP-NVPITLTVYDH 111 (202)
Q Consensus 40 ~~~g~L~v~v~~a~~L~~---~~-~~~~dpyv~v~~~---~~~~~T~~~~~t~~P~w~e~f~f~v~~~-~~~L~i~V~d~ 111 (202)
...+.|.|+|++|++|+. ++ .+.+||||++++. ..+++|++++++.||+|||+|.|.+... ...|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 357899999999999998 77 7899999999998 4688999999999999999999999874 35699999999
Q ss_pred CCCCCCCccEEEEEehHhHHHH
Q 028875 112 DLFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 112 ~~~~~d~~lG~~~i~l~~l~~~ 133 (202)
+.++ |++||++.++|.++..+
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g 115 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVG 115 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTT
T ss_pred CCCC-CceeEEEEEEHHHcCCC
Confidence 9998 99999999999887543
No 44
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.64 E-value=1.5e-17 Score=143.45 Aligned_cols=89 Identities=15% Similarity=0.193 Sum_probs=9.6
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCcEEEEEECCe-EEeceeecCC---CCCeEeeeeEEEEeCCCCcEEEEEEec-C---
Q 028875 41 LLGLLRIRIKRGVNLAVRDVRSSDPYVVVKMGKQ-KLKTRVIKKD---VNPEWNEDLTLSITDPNVPITLTVYDH-D--- 112 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~~-~~~T~~~~~t---~~P~w~e~f~f~v~~~~~~L~i~V~d~-~--- 112 (202)
..+.|.|+|++|++|++++ ||||++++++. ..+|++++++ .||.|||+|.|.+......|.|+|||. +
T Consensus 9 ~~~~L~V~VieAk~L~~~d----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~~ 84 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKKR 84 (483)
T ss_dssp EEECC-------------------------------------------------CCEECC--------------------
T ss_pred eccEEEEEEEEcCCcCCCC----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCccc
Confidence 5678999999999998876 99999999865 5699999999 999999999999765556799999994 4
Q ss_pred CCCCCCccEEEEEehHhHHHH
Q 028875 113 LFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 113 ~~~~d~~lG~~~i~l~~l~~~ 133 (202)
..++|++||.+.|+++++..+
T Consensus 85 ~~~~d~~lG~v~i~l~~l~~~ 105 (483)
T 3bxj_A 85 KKDKAGYVGLVTVPVATLAGR 105 (483)
T ss_dssp ---------------------
T ss_pred cCCCCceEEEEEEEHHHhcCC
Confidence 366899999999999988754
No 45
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.61 E-value=2.5e-16 Score=127.63 Aligned_cols=95 Identities=27% Similarity=0.400 Sum_probs=83.5
Q ss_pred ccccceEEEEEEEEeecCCCCC-CCCCCcEEEEEEC--C---eEEeceeecCCCCCeEeeeeEEEEeCCC---CcEEEEE
Q 028875 38 METLLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMG--K---QKLKTRVIKKDVNPEWNEDLTLSITDPN---VPITLTV 108 (202)
Q Consensus 38 ~~~~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~--~---~~~~T~~~~~t~~P~w~e~f~f~v~~~~---~~L~i~V 108 (202)
+.+..|.|.|+|++|++|+.++ .+.+||||++++. + .+++|++++++.||.|||+|.|.+.... ..|.|+|
T Consensus 147 y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V 226 (296)
T 1dqv_A 147 YLPTAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAV 226 (296)
T ss_dssp EETTTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEE
T ss_pred eccccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEE
Confidence 4456789999999999999998 7889999999986 2 5789999999999999999999987543 4699999
Q ss_pred EecCCCCCCCccEEEEEehHhHHH
Q 028875 109 YDHDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 109 ~d~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
||++.++++++||.+.+++..+..
T Consensus 227 ~d~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 227 VDYDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp EECCSSSCCEEEEECCCSSCTTCH
T ss_pred EeCCCCCCCceEEEEEECCccCCc
Confidence 999999999999999999987643
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.55 E-value=2.1e-14 Score=128.40 Aligned_cols=93 Identities=33% Similarity=0.574 Sum_probs=83.5
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCcEEEEEE-----CCeEEeceeecCCCCCeEeeeeEEEEeCCC--CcEEEEEEecC
Q 028875 41 LLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKM-----GKQKLKTRVIKKDVNPEWNEDLTLSITDPN--VPITLTVYDHD 112 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~-----~~~~~~T~~~~~t~~P~w~e~f~f~v~~~~--~~L~i~V~d~~ 112 (202)
..+.|.|+|++|++|.+++ .+.+||||++++ ...+++|++++++.||.|||+|.|.+...+ ..|.|+|||++
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 3578999999999999999 889999999998 346789999999999999999999987543 45999999999
Q ss_pred CCCCCCccEEEEEehHhHHHH
Q 028875 113 LFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 113 ~~~~d~~lG~~~i~l~~l~~~ 133 (202)
.+++|++||.+.+++.++...
T Consensus 250 ~~~~dd~iG~~~i~l~~l~~~ 270 (674)
T 3pfq_A 250 LTSRNDFMGSLSFGISELQKA 270 (674)
T ss_dssp SSSCCEECCBCCCBTTHHHHC
T ss_pred cccccccccccccchhhhccC
Confidence 999999999999999998764
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.43 E-value=1.4e-12 Score=117.94 Aligned_cols=85 Identities=20% Similarity=0.394 Sum_probs=72.2
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCcEEEEEECC-------eEEeceeecC-CCCCeEeee-eEEE-EeCCC-CcEEEEEEe
Q 028875 42 LGLLRIRIKRGVNLAVRDVRSSDPYVVVKMGK-------QKLKTRVIKK-DVNPEWNED-LTLS-ITDPN-VPITLTVYD 110 (202)
Q Consensus 42 ~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~-------~~~~T~~~~~-t~~P~w~e~-f~f~-v~~~~-~~L~i~V~d 110 (202)
.+.|+|+|++|++|+.. ..||||++.+.+ .+++|+++++ +.||+|||+ |.|. +..++ ..|.|+|||
T Consensus 649 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK---QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp CEEEEEEEEEEECCCSS---CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC---CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 47899999999999854 689999999863 5789999987 599999998 9998 76555 348999999
Q ss_pred cCCCCCCCccEEEEEehHhHHHH
Q 028875 111 HDLFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 111 ~~~~~~d~~lG~~~i~l~~l~~~ 133 (202)
++ +++||++.++|+.|..+
T Consensus 726 ~d----ddfiG~~~ipL~~L~~G 744 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKPG 744 (816)
T ss_dssp TT----SCEEEEEEEESTTCCCE
T ss_pred cC----CCeeeEEEEEHHHcCCc
Confidence 84 78999999999877654
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.42 E-value=7.8e-13 Score=120.21 Aligned_cols=85 Identities=21% Similarity=0.418 Sum_probs=71.1
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCcEEEEEECC------eEEeceeecCC-CCCeEee-eeEEE-EeCCC-CcEEEEEEec
Q 028875 42 LGLLRIRIKRGVNLAVRDVRSSDPYVVVKMGK------QKLKTRVIKKD-VNPEWNE-DLTLS-ITDPN-VPITLTVYDH 111 (202)
Q Consensus 42 ~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~------~~~~T~~~~~t-~~P~w~e-~f~f~-v~~~~-~~L~i~V~d~ 111 (202)
...|.|+|++|++|+.. ..||||+|.+.+ .+++|+++.++ .||+||| +|.|. +..++ ..|.|+|||+
T Consensus 724 ~~~L~V~Visaq~L~~~---~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp CEEEEEEEEEEESCCSS---CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred ceEEEEEEEEeccCccc---CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 45899999999999863 689999999863 35799999875 9999999 69998 65555 4499999998
Q ss_pred CCCCCCCccEEEEEehHhHHHH
Q 028875 112 DLFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 112 ~~~~~d~~lG~~~i~l~~l~~~ 133 (202)
+ +++||++.++|..|..+
T Consensus 801 d----ddfiG~~~lpL~~L~~G 818 (885)
T 3ohm_B 801 G----GKFVGHRILPVSAIRSG 818 (885)
T ss_dssp T----TEEEEEEEEETTTCCCE
T ss_pred C----ccEEeeEEEEHHHcCCC
Confidence 6 78999999999877654
No 49
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.41 E-value=1.4e-11 Score=85.93 Aligned_cols=115 Identities=18% Similarity=0.289 Sum_probs=85.9
Q ss_pred cceEEEEEEEEeecCCCCC-CCCCCcEEEEEECCeE----Eec-eeecCCCCCeEeeeeEEEEeCCCCcEEEEEEecCCC
Q 028875 41 LLGLLRIRIKRGVNLAVRD-VRSSDPYVVVKMGKQK----LKT-RVIKKDVNPEWNEDLTLSITDPNVPITLTVYDHDLF 114 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~-~~~~dpyv~v~~~~~~----~~T-~~~~~t~~P~w~e~f~f~v~~~~~~L~i~V~d~~~~ 114 (202)
....|+|.+.++.--..+. ....||||.+.++... .+| ...++|..|.||++|+-.+.+ .+.|.|.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYE-GRVIQIVLMRAAE- 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCT-TCEEEEEEEEETT-
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeC-CEEEEEEEEcCCC-
Confidence 3467888876665322111 2368999999997432 244 667779999999999999864 6789999997654
Q ss_pred CCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEecccceeeEEEEEEEE
Q 028875 115 SKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNVECGELEIQLQWI 194 (202)
Q Consensus 115 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~i~l~l~~~ 194 (202)
+|++.++|++++|....+- .+| ..+.|++|+. +|+|++.++|+
T Consensus 82 ---~fvAn~tV~~edL~~~c~~------------------------------~~g--~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 ---EPVSEVTVGVSVLAERCKK------------------------------NNG--KAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp ---EEEEEEEEEHHHHHHHHHT------------------------------TTT--EEEEEEECBS--SCEEEEEEEEE
T ss_pred ---CeeeEEEEEHHHHHhhhcc------------------------------CCC--ceEEEEeccc--CcEEEEEEEEe
Confidence 8999999999999976321 013 3499999985 69999999987
No 50
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.38 E-value=3.5e-12 Score=115.55 Aligned_cols=85 Identities=22% Similarity=0.404 Sum_probs=71.1
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCcEEEEEECC------eEEece-eecC-CCCCeEee-eeEE-EEeCCCC-cEEEEEE
Q 028875 41 LLGLLRIRIKRGVNLAVRDVRSSDPYVVVKMGK------QKLKTR-VIKK-DVNPEWNE-DLTL-SITDPNV-PITLTVY 109 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~~------~~~~T~-~~~~-t~~P~w~e-~f~f-~v~~~~~-~L~i~V~ 109 (202)
..+.|.|+|++|++|+. +.+||||+|.+.+ .+++|+ ++++ +.||+||| +|.| .+..++. .|.|+||
T Consensus 676 ~~~~L~V~Visa~~L~~---~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE---RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp TCEEEEEEEEEEESCCS---SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeeEEEEEEeccccCc---cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 46899999999999985 3689999999842 367999 8875 59999999 6999 7866554 4899999
Q ss_pred ecCCCCCCCccEEEEEehHhHHH
Q 028875 110 DHDLFSKDDRMGDAEFDIKTYIE 132 (202)
Q Consensus 110 d~~~~~~d~~lG~~~i~l~~l~~ 132 (202)
|++ +++||++.++|+.|..
T Consensus 753 D~d----~d~iG~~~ipl~~L~~ 771 (799)
T 2zkm_X 753 EEG----NKFLGHRIIPINALNS 771 (799)
T ss_dssp ETT----TEEEEEEEEEGGGBCC
T ss_pred EeC----CCccceEeeehhhcCC
Confidence 986 7899999999987754
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.36 E-value=2.4e-11 Score=85.84 Aligned_cols=118 Identities=15% Similarity=0.277 Sum_probs=88.1
Q ss_pred ccceEEEEEEEEeecCCCC--CCCCCCcEEEEEECCe----EEec-eeecCCCCCeEeeeeEEEEeCCCCcEEEEEEecC
Q 028875 40 TLLGLLRIRIKRGVNLAVR--DVRSSDPYVVVKMGKQ----KLKT-RVIKKDVNPEWNEDLTLSITDPNVPITLTVYDHD 112 (202)
Q Consensus 40 ~~~g~L~v~v~~a~~L~~~--~~~~~dpyv~v~~~~~----~~~T-~~~~~t~~P~w~e~f~f~v~~~~~~L~i~V~d~~ 112 (202)
...+.|+|.+.+..--+.+ .....||||.+.++.. ..+| ...++|..|.||++|.-.+.+ .+.|.|.|++..
T Consensus 7 ~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~-Gr~l~i~Vfh~a 85 (138)
T 2enj_A 7 GMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINK-GRVMQIIVKGKN 85 (138)
T ss_dssp SCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCS-SCEEEEEEECSS
T ss_pred ccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEEC-CeEEEEEEEcCC
Confidence 3556788888776643322 2346899999999843 2455 566678999999999998864 678999999764
Q ss_pred CCCCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCCCCccCCCceeEeeCCcEEEEEEEEecccceeeEEEEEE
Q 028875 113 LFSKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSRHNCLSEQSCVVWKEGKVVQDLVLRLRNVECGELEIQLQ 192 (202)
Q Consensus 113 ~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~G~i~l~l~ 192 (202)
. +|++.++|++.+|....+- .+|+ .+.|++|+. .|+|++.++
T Consensus 86 ~----~fVAn~tV~~edL~~~ck~------------------------------~~g~--~e~WvdLeP--~Gkl~v~i~ 127 (138)
T 2enj_A 86 V----DLISETTVELYSLAERCRK------------------------------NNGK--TEIWLELKP--QGRMLMNAR 127 (138)
T ss_dssp C----SCCEEEEEESHHHHHHHHH------------------------------TTTC--EEEEEECBS--SCEEEEEEE
T ss_pred C----CeeeEEEEEHHHHHhhhcc------------------------------CCCc--eEEEEeccc--CcEEEEEEE
Confidence 4 8999999999999976320 0132 399999985 699999999
Q ss_pred EEeC
Q 028875 193 WIDL 196 (202)
Q Consensus 193 ~~~~ 196 (202)
|.--
T Consensus 128 ~~~e 131 (138)
T 2enj_A 128 YFLE 131 (138)
T ss_dssp ECCC
T ss_pred EEEe
Confidence 9643
No 52
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=94.37 E-value=0.65 Score=33.41 Aligned_cols=92 Identities=16% Similarity=0.226 Sum_probs=63.8
Q ss_pred cccceEEEEEEEEeecCCCCC---CCCCCcEEEEEEC--C-eEEeceeecCCCCCeEeeeeEEEEeCCC--------CcE
Q 028875 39 ETLLGLLRIRIKRGVNLAVRD---VRSSDPYVVVKMG--K-QKLKTRVIKKDVNPEWNEDLTLSITDPN--------VPI 104 (202)
Q Consensus 39 ~~~~g~L~v~v~~a~~L~~~~---~~~~dpyv~v~~~--~-~~~~T~~~~~t~~P~w~e~f~f~v~~~~--------~~L 104 (202)
.+-.+.+.|.|.++. +.+.. .+..+|..-+.++ . +.+.|.+.. ..+|.+|-+-.|.+...+ ..+
T Consensus 14 ~~gEnlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 14 ERGENLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CSSCEEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred cCCCcEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 445688999998876 32211 2344665555544 4 455666655 789999988888885432 568
Q ss_pred EEEEEecCCCCCCCccEEEEEehHhHHHH
Q 028875 105 TLTVYDHDLFSKDDRMGDAEFDIKTYIEA 133 (202)
Q Consensus 105 ~i~V~d~~~~~~d~~lG~~~i~l~~l~~~ 133 (202)
.++++..... .-..||.++|+|.++.+.
T Consensus 92 ~lELhqa~g~-~~~tla~~~I~l~~lLe~ 119 (156)
T 2yrb_A 92 TLEVHQAYST-EYETIAACQLKFHEILEK 119 (156)
T ss_dssp EEEEEEECSS-CEEEEEEEEECCSHHHHC
T ss_pred EEEEEEeeCC-CceEEEEEEEEhHHhhCc
Confidence 8999887543 556899999999999875
No 53
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=94.02 E-value=0.3 Score=45.06 Aligned_cols=104 Identities=18% Similarity=0.249 Sum_probs=68.7
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCcEEEEEE--CCe----EEeceeecCCCCCeEeeeeEEEEeC----CCCcEEEEEEe
Q 028875 41 LLGLLRIRIKRGVNLAVRDVRSSDPYVVVKM--GKQ----KLKTRVIKKDVNPEWNEDLTLSITD----PNVPITLTVYD 110 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~--~~~----~~~T~~~~~t~~P~w~e~f~f~v~~----~~~~L~i~V~d 110 (202)
....+.|+|.++.++... ...+-||.+.+ |++ ...|+.+.-..+|.|||.+.|++.- .+..|.|+||+
T Consensus 215 ~~~~f~i~i~~~~~~~~~--~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD--ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CCSEEEEEEEEEECCCC-----CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred cCCceEEEEEEecccCCC--CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 456899999999988654 24567777665 332 3445555546789999999998863 24569999998
Q ss_pred cCCC--C----------CCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeC
Q 028875 111 HDLF--S----------KDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPS 153 (202)
Q Consensus 111 ~~~~--~----------~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~ 153 (202)
...- + .+..+|.+.++|-+.. ..+..|.....+.|.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~-------~~l~~G~~~l~lw~~ 340 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK-------DQLKTGERCLYMWPS 340 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT-------SBBCCEEEEEECEEC
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc-------CccccCCEEEEEeeC
Confidence 5321 1 2348999999986533 245667777776663
No 54
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=93.46 E-value=0.53 Score=44.02 Aligned_cols=106 Identities=20% Similarity=0.255 Sum_probs=70.7
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCcEEEEEEC--C----eEEeceeecCCCCCeEeeeeEEEEeC----CCCcEEEEEEe
Q 028875 41 LLGLLRIRIKRGVNLAVRDVRSSDPYVVVKMG--K----QKLKTRVIKKDVNPEWNEDLTLSITD----PNVPITLTVYD 110 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~~--~----~~~~T~~~~~t~~P~w~e~f~f~v~~----~~~~L~i~V~d 110 (202)
....+.|+|..+.++........+-||.+.+- + ...+|+.+. ..+|.|||.+.|++.- .+..|.|+||+
T Consensus 353 ~~~~f~v~i~~~~~~n~~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNIRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCCSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCCEEEEEEEecCCCCCccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 45688999999988754333345678887763 2 344555443 4578899999998863 24569999998
Q ss_pred cCCC----CCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCC
Q 028875 111 HDLF----SKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSR 154 (202)
Q Consensus 111 ~~~~----~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~ 154 (202)
.... .....||.+.++|-+.. ..+..|.......+.+
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~~-------~~L~~G~~~L~lW~~~ 472 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDYT-------DTLVSGKMALNLWPVP 472 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCTT-------CBBCCEEEEEECEECC
T ss_pred ecCccCcccccceeEEeeeeeEccC-------CeEEcCCeEEEeecCC
Confidence 6542 13457999999986543 3456787777777643
No 55
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=92.81 E-value=2.1 Score=32.53 Aligned_cols=55 Identities=13% Similarity=0.193 Sum_probs=41.5
Q ss_pred eEEeceeecCCCCCeEeeeeEEEEeCCC---CcEEEEEEecCCCC----CCCccEEEEEehH
Q 028875 74 QKLKTRVIKKDVNPEWNEDLTLSITDPN---VPITLTVYDHDLFS----KDDRMGDAEFDIK 128 (202)
Q Consensus 74 ~~~~T~~~~~t~~P~w~e~f~f~v~~~~---~~L~i~V~d~~~~~----~d~~lG~~~i~l~ 128 (202)
..++|-+...+.+|.|+|++.+.+.... ..|.|++++...-. ....+|.+.++|-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 3578888888899999999999987532 44899998765321 2346899999983
No 56
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=90.25 E-value=1.5 Score=40.62 Aligned_cols=106 Identities=15% Similarity=0.078 Sum_probs=65.4
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCcEEEEEE--CCeE---EeceeecCCCCCeEeeeeEEEEeCC----CCcEEEEEEecC
Q 028875 42 LGLLRIRIKRGVNLAVRDVRSSDPYVVVKM--GKQK---LKTRVIKKDVNPEWNEDLTLSITDP----NVPITLTVYDHD 112 (202)
Q Consensus 42 ~g~L~v~v~~a~~L~~~~~~~~dpyv~v~~--~~~~---~~T~~~~~t~~P~w~e~f~f~v~~~----~~~L~i~V~d~~ 112 (202)
...+.|+|..+.......+...+-||.+.+ |++. .+|..+.-+.+|.|||.+.|++.-. +..|.|+||+..
T Consensus 217 ~~~f~i~i~~~~~~~~~~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 217 DRKFRVKIRGIDIPVLPRTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp CSEEEEEEEEEECSSCCTTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred cCceEEEEeecccccccCCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 456888888876422112234567777654 3332 3454444456799999999988632 456999999743
Q ss_pred CCC----------------CCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEeeCC
Q 028875 113 LFS----------------KDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMPSR 154 (202)
Q Consensus 113 ~~~----------------~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~~~ 154 (202)
..+ ....+|.+.++|-+... .+..|.....+.|..
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~~~-------~l~~G~~~L~lw~~~ 347 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDHRF-------LLRHGEYVLHMWQLS 347 (961)
T ss_dssp C--------------------CEEEEEEEESBCTTS-------BBCCEEEEEECEECC
T ss_pred cCccccccccccccccccccceeEEEEeeeeecCCC-------ccccCCEEEEEeeCc
Confidence 221 23478999998865432 456677777776644
No 57
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=83.10 E-value=1.7 Score=40.77 Aligned_cols=103 Identities=16% Similarity=0.160 Sum_probs=63.7
Q ss_pred cceEEEEEEEEeecCCCCCCCCCCcEEEEE--ECCeE----EeceeecCCCCCeEeeeeEEEEeCC----CCcEEEEEEe
Q 028875 41 LLGLLRIRIKRGVNLAVRDVRSSDPYVVVK--MGKQK----LKTRVIKKDVNPEWNEDLTLSITDP----NVPITLTVYD 110 (202)
Q Consensus 41 ~~g~L~v~v~~a~~L~~~~~~~~dpyv~v~--~~~~~----~~T~~~~~t~~P~w~e~f~f~v~~~----~~~L~i~V~d 110 (202)
....+.|+|..+.++...+ ..+-||.+. .|++. ..|+.+.-..+|.|||.+.|++.-. +..|.|+||+
T Consensus 351 ~~~~f~i~i~~~~~~~~~~--~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 351 NNNPFQITLVKGNKLNTEE--TVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CCSEEEEEECCCCCCCCCS--SCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred cCCCEEEEEEEeccCCCCC--CceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 4568999999998886542 455666544 34432 3454444457899999999988643 3559999998
Q ss_pred cCCC----------------------CCCCccEEEEEehHhHHHHhcCCcccCCCceEEEEEee
Q 028875 111 HDLF----------------------SKDDRMGDAEFDIKTYIEALKMNLDSLPTGTIISRVMP 152 (202)
Q Consensus 111 ~~~~----------------------~~d~~lG~~~i~l~~l~~~~~~~~~~~~~g~~~~~~~~ 152 (202)
.... +.+..+|.+.++|-+.. ..+..|.....+.|
T Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~-------~~l~~G~~~l~lw~ 485 (1092)
T 2y3a_A 429 VLDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK-------GQLRSGDVILHSWS 485 (1092)
T ss_dssp C------------------------------CCEEEEESBCTT-------CBBCCEEEECCCCT
T ss_pred ecCccccccccccccccccccccccccccceeEEEeeeeECCc-------CcccCCCeEEEEee
Confidence 5311 01237888888886433 23455666666555
Done!