Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>028876
MDSTGTNSNMEEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESC
ESKVLSQCEHGARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKD
KCAGFAKDRLLRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFR
VRTNYRAADLLGSDNNYKRFLG

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028876
        (202 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2087373 - symbol:AT3G63390 species:3702 "Arabi...   449  1.9e-42   1


>TAIR|locus:2087373 [details] [associations]
            symbol:AT3G63390 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] [GO:0009536 "plastid"
            evidence=IDA] GO:GO:0009536 EMBL:CP002686 EMBL:BT025528
            IPI:IPI00547515 RefSeq:NP_567146.1 UniGene:At.33935
            EnsemblPlants:AT3G63390.1 GeneID:825514 KEGG:ath:AT3G63390
            TAIR:At3g63390 HOGENOM:HOG000243897 InParanoid:Q1H5D6 OMA:CKPPWWR
            PhylomeDB:Q1H5D6 ProtClustDB:CLSN2689353 Genevestigator:Q1H5D6
            Uniprot:Q1H5D6
        Length = 175

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 99/184 (53%), Positives = 121/184 (65%)

Query:    11 EEYSAASTVIKFDKPIPLLRGPVPHDDPSSGSYLLAFRSHQSWASAYESCESKVLSQCEH 70
             +++SAA+T + FD+PIPLLRGPVP    S GSY+LAFRS  SW++A++ CE+ +  QCE 
Sbjct:     6 DDFSAAATTVVFDRPIPLLRGPVP----SGGSYVLAFRSLDSWSAAFKRCETLIKDQCEE 61

Query:    71 GARIGCSVNASKKCKPPWWRNLIGQRPADFKEREDCEVREMEACLIVAKDKCAGFAKDRL 130
             GA+IGC+V+AS  CKPPWWR   G    D +ERE CE RE E C+  AK KCA FAKD+ 
Sbjct:    62 GAKIGCAVSASNNCKPPWWRGSGG----DMREREKCEEREFEGCVAAAKGKCAAFAKDKC 117

Query:   131 LRPFQDARIAGRVGPKEVEKLVCWASLPETERSLWRDLIGSEWLGEREFRVRTNY---RA 187
                F DARIA     KEVE LV  AS+PE  R  WRDL+G   LG    R+ TN     A
Sbjct:   118 SGAFLDARIAK---DKEVEGLVWLASMPEESR--WRDLMG---LGG-SLRLHTNNCCCTA 168

Query:   188 ADLL 191
              DLL
Sbjct:   169 RDLL 172


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      202       202   0.00090  111 3  11 22  0.50    32
                                                     31  0.46    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  202 KB (2113 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.43u 0.07s 18.50t   Elapsed:  00:00:00
  Total cpu time:  18.43u 0.07s 18.50t   Elapsed:  00:00:01
  Start:  Thu May  9 19:23:18 2013   End:  Thu May  9 19:23:19 2013

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