BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028883
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O58058|PURE_PYRHO N5-carboxyaminoimidazole ribonucleotide mutase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=purE PE=3 SV=1
Length = 177
Score = 134 bits (336), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 106/148 (71%), Gaps = 1/148 (0%)
Query: 56 TDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIK 115
++ P+VGIIM SD DLPVM +AAR L +FGVPYEI I+ H+ + A YA A+ERGI+
Sbjct: 7 SEKPLVGIIMGSDSDLPVMKEAARILEEFGVPYEITIISAHRTPERAYEYAKKAEERGIE 66
Query: 116 IIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSE-DDVINSIRMPSHVQVASVPRNNA 174
+II G G AHL G+ A+ + + VI VP+ S+ + D +++ ++MPS + VA+V +NA
Sbjct: 67 VIIAGAGGAAHLPGIIASLTVLPVIGVPIKSKALNGLDSLLSIVQMPSGIPVATVAIDNA 126
Query: 175 KNAALYAVKVLGIADEDLLERIRKYVEE 202
KNAAL A+++LGI ++ E++R+Y+++
Sbjct: 127 KNAALLALRILGIKYPEIKEKLRRYMKD 154
>sp|P21264|PUR6_YEAST Phosphoribosylaminoimidazole carboxylase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ADE2 PE=1
SV=1
Length = 571
Score = 119 bits (298), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 113/202 (55%), Gaps = 6/202 (2%)
Query: 1 MFNNSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVRE-PSTVFEEENPNGDSTDAP 59
++ RPN R V G I ++ASS R + + P + + + ++ P
Sbjct: 348 LYGKESRPN--RKV--GHINIIASSMAECEQRLNYITGRTDIPIKISVAQKLDLEAMVKP 403
Query: 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 119
+VGIIM SD DLPVM+ A L DFGVP+E+ I+ H+ +YA+SA +RGIK II
Sbjct: 404 LVGIIMGSDSDLPVMSAACAVLKDFGVPFEVTIVSAHRTPHRMSAYAISASKRGIKTIIA 463
Query: 120 GDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNNAKNAA 178
G G AHL G+ AA + + VI VP+ D ++SI +MP V VA+V NN+ NAA
Sbjct: 464 GAGGAAHLPGMVAAMTPLPVIGVPVKGSCLDGVDSLHSIVQMPRGVPVATVAINNSTNAA 523
Query: 179 LYAVKVLGIADEDLLERIRKYV 200
L AV++LG D ++ +++
Sbjct: 524 LLAVRLLGAYDSSYTTKMEQFL 545
>sp|Q92210|PUR6_CANAL Phosphoribosylaminoimidazole carboxylase OS=Candida albicans
(strain SC5314 / ATCC MYA-2876) GN=ADE2 PE=3 SV=2
Length = 568
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 111/203 (54%), Gaps = 14/203 (6%)
Query: 1 MFNNSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTD--A 58
++ + RP G I V+ SS A SR S + +T E P +TD +
Sbjct: 348 LYGKTTRPER----KMGHINVVTSSMQDAESRL---SYILGDTT----EIPKSLATDKES 396
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P+VGIIM SD DLPVM AR L FGVP+E+ I+ H+ YA+ A +RG+K II
Sbjct: 397 PLVGIIMGSDSDLPVMAVGARILKQFGVPFELTIVSAHRTPHRMSEYAIEAPKRGLKCII 456
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNNAKNA 177
G G AHL G+ AA + + VI VP+ D ++SI +MP + VA+V NN+ NA
Sbjct: 457 AGAGGAAHLPGMVAAMTPLPVIGVPVKGSTLDGVDSLHSIVQMPRGIPVATVAINNSTNA 516
Query: 178 ALYAVKVLGIADEDLLERIRKYV 200
AL A+++LG D L + +Y+
Sbjct: 517 ALLAIRILGAYDSKWLTEMNQYM 539
>sp|Q9UY68|PURE_PYRAB N5-carboxyaminoimidazole ribonucleotide mutase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=purE PE=3 SV=1
Length = 174
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 98/145 (67%), Gaps = 1/145 (0%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P VGIIM SD DLPVM +AA+ L DF V YE+K++ H+ + YA +A+ERGI++II
Sbjct: 7 PKVGIIMGSDSDLPVMKEAAKVLEDFEVDYEMKVISAHRTPERLHEYARTAEERGIEVII 66
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSE-DDVINSIRMPSHVQVASVPRNNAKNA 177
G G AHL GV AA + I VI VP+ S+ + D +++ ++MP + VA+V + AKNA
Sbjct: 67 AGAGGAAHLPGVLAALTMIPVIGVPIKSKALNGLDSLLSIVQMPPGIPVATVGIDGAKNA 126
Query: 178 ALYAVKVLGIADEDLLERIRKYVEE 202
AL A+++L I ++ E+++KY E+
Sbjct: 127 ALLALEILSIKYPEIKEKLKKYRED 151
>sp|P55195|PUR6_VIGAC Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment)
OS=Vigna aconitifolia GN=PURKE PE=2 SV=1
Length = 557
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 94/144 (65%), Gaps = 1/144 (0%)
Query: 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 119
++G IM SD DLPVM AA + FGVP+E++I+ H+ + YA SA ERG ++II
Sbjct: 390 LLGFIMGSDSDLPVMKSAAEMMEMFGVPHEVRIVSAHRTPELMFCYASSAHERGYQVIIA 449
Query: 120 GDGVEAHLSGVAAANSQILVIRVPLLSEDW-SEDDVINSIRMPSHVQVASVPRNNAKNAA 178
G G AHL G+ A+ + + V+ VP+ + D +++ ++MP V VA+V NNA NA
Sbjct: 450 GAGGAAHLPGMVASLTPLPVVGVPVRASTLDGLDSLLSIVQMPRGVPVATVAVNNATNAG 509
Query: 179 LYAVKVLGIADEDLLERIRKYVEE 202
L AV++LG+A+++LL R+ +Y E+
Sbjct: 510 LLAVRMLGVANDNLLSRMSQYQED 533
>sp|P50504|PUR6_SCHOC Phosphoribosylaminoimidazole carboxylase OS=Schwanniomyces
occidentalis GN=ADE2 PE=3 SV=1
Length = 557
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
Query: 1 MFNNSKRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPI 60
++ S RPN G I +++SS SR D + + S + E P + P+
Sbjct: 345 LYGKSTRPNR----KMGHINIVSSSMEDCESRL--DYIIGKSSKIPENLIPK----EKPL 394
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
V IIM SD DLPVM+ A L FGVP+E+ I+ H+ YA+ A +RG+K+II G
Sbjct: 395 VSIIMGSDSDLPVMSVGANILKRFGVPFELTIVSAHRTPHRMTQYAIEAPKRGLKVIIAG 454
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNNAKNAAL 179
G AHL G+ AA + + VI VP+ D ++SI +MP + VA+V NN+ NAAL
Sbjct: 455 AGGAAHLPGMVAAMTPLPVIGVPVKGSTLDGVDSLHSIVQMPRGIPVATVAINNSTNAAL 514
Query: 180 YAVKVLGIADEDLLERIRKYV 200
AV++LG D L + +Y+
Sbjct: 515 LAVRILGAYDYKWLNEMNQYM 535
>sp|Q9WYS7|PURE_THEMA N5-carboxyaminoimidazole ribonucleotide mutase OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=purE PE=1 SV=1
Length = 171
Score = 114 bits (286), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/144 (44%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P VGIIM SD DLPVM AA L +FG+ YEI I+ H+ YA +A+ERGI++II
Sbjct: 2 PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVII 61
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNNAKNA 177
G G AHL G+ A+ + + VI VP+ + + D + SI +MP V VA+V NNAKNA
Sbjct: 62 AGAGGAAHLPGMVASITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNA 121
Query: 178 ALYAVKVLGIADEDLLERIRKYVE 201
+ A +LGI ++ ++++Y E
Sbjct: 122 GILAASILGIKYPEIARKVKEYKE 145
>sp|Q44679|PURE_CORAM N5-carboxyaminoimidazole ribonucleotide mutase OS=Corynebacterium
ammoniagenes GN=purE PE=3 SV=1
Length = 177
Score = 112 bits (280), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 90/145 (62%), Gaps = 1/145 (0%)
Query: 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKII 117
AP+VG+IM SD D P + AA L +FGVP+E+ ++ H+ ++ L YA A RGIK+I
Sbjct: 3 APLVGLIMGSDSDWPTVEPAAEVLDEFGVPFEVGVVSAHRTPEKMLDYAKQAHTRGIKVI 62
Query: 118 IVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSE-DDVINSIRMPSHVQVASVPRNNAKN 176
+ G AHL G+ AA + + VI +P +D D +++ ++MP+ V VA+V AKN
Sbjct: 63 VACAGGAAHLPGMVAAATPLPVIGIPRALKDLEGLDSLLSIVQMPAGVPVATVSIGGAKN 122
Query: 177 AALYAVKVLGIADEDLLERIRKYVE 201
A L A++ LG+ +L+ER+ Y E
Sbjct: 123 AGLLAIRTLGVQYSELVERMADYQE 147
>sp|O74197|PUR6_CANGA Phosphoribosylaminoimidazole carboxylase OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=ADE2 PE=3 SV=2
Length = 570
Score = 110 bits (275), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Query: 52 NGDSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE 111
N + P+VG+IM SD DLPVM+ A + L F VP+E+ I+ H+ YA A
Sbjct: 395 NAEEVRKPLVGVIMGSDSDLPVMSAACKMLEQFEVPFEVTIVSAHRTPYRMNKYASEAVS 454
Query: 112 RGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVP 170
RGIK+II G G AHL G+ AA + + VI VP+ D ++SI +MP V VA+V
Sbjct: 455 RGIKVIIAGAGGAAHLPGMVAAMTPVPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVA 514
Query: 171 RNNAKNAALYAVKVLGIADEDLLERIRKYV 200
NN+ NA + AV++LGI + D ++++ +++
Sbjct: 515 INNSTNAGILAVRMLGIHNYDYVKKMEEFL 544
>sp|Q01930|PUR6_OGAME Phosphoribosylaminoimidazole carboxylase OS=Ogataea methanolica
GN=ADE1 PE=3 SV=1
Length = 543
Score = 107 bits (266), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 82/136 (60%), Gaps = 1/136 (0%)
Query: 55 STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI 114
++ P+VG+IM SD DLPVM+ L F VP+E+ I+ H+ + YA+ A +RG+
Sbjct: 398 TSSKPLVGVIMGSDSDLPVMSLGCNILKQFNVPFEVTIVSAHRTPQRMAKYAIDAPKRGL 457
Query: 115 KIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNN 173
K II G G AHL G+ AA + + VI VP+ D ++SI +MP + VA+V NN
Sbjct: 458 KCIIAGAGGAAHLPGMVAAMTPLPVIGVPVKGSTLDGVDSLHSIVQMPRGIPVATVAINN 517
Query: 174 AKNAALYAVKVLGIAD 189
A NAAL A+ +LG D
Sbjct: 518 ATNAALLAITILGAGD 533
>sp|P15567|PUR6_SCHPO Phosphoribosylaminoimidazole carboxylase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ade6 PE=3 SV=1
Length = 552
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 89/149 (59%), Gaps = 1/149 (0%)
Query: 54 DSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERG 113
D ++P+VGIIM SD DL M DAA L +F VPYE+ I+ H+ ++YA +A RG
Sbjct: 381 DPVESPVVGIIMGSDSDLSKMKDAAVILDEFKVPYELTIVSAHRTPDRMVTYARTAASRG 440
Query: 114 IKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRN 172
+++II G G AHL G+ AA + + VI VP+ D ++SI +MP V VA+V N
Sbjct: 441 LRVIIAGAGGAAHLPGMVAAMTPLPVIGVPVKGSTLDGVDSLHSIVQMPRGVPVATVAIN 500
Query: 173 NAKNAALYAVKVLGIADEDLLERIRKYVE 201
N++NA + A ++L LL + +++
Sbjct: 501 NSQNAGILACRILATFQPSLLAAMESFMD 529
>sp|O67239|PURE_AQUAE N5-carboxyaminoimidazole ribonucleotide mutase OS=Aquifex aeolicus
(strain VF5) GN=purE PE=3 SV=1
Length = 167
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 90/145 (62%), Gaps = 1/145 (0%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P+VG+IM S D M A L +FGVP+E+K++ H+ + YA +A+ERGI++II
Sbjct: 3 PLVGVIMGSISDWEYMKKAVEVLKEFGVPHEVKVVSAHRTPELMYEYAKTARERGIEVII 62
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNNAKNA 177
G G AHL G+ A+ + + VI VP+ +++ D + SI +MP+ + VA+V NA NA
Sbjct: 63 AGAGGSAHLPGMTASMTTLPVIGVPIPTKNLGGVDSLYSIVQMPAGIPVATVAIGNATNA 122
Query: 178 ALYAVKVLGIADEDLLERIRKYVEE 202
L AV++L I + +++ +Y E+
Sbjct: 123 GLLAVRILSIKYPEYAKKLDEYTEK 147
>sp|O06456|PURE_SULSO N5-carboxyaminoimidazole ribonucleotide mutase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=purE PE=3 SV=1
Length = 158
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 92/145 (63%), Gaps = 1/145 (0%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P V +IM S D M +A L FG+ YE +++ H+ + + YA A++RGI++II
Sbjct: 2 PKVAVIMGSKNDWEYMREAVEILKQFGIDYEARVVSAHRTPEFMMQYAKEAEKRGIEVII 61
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSE-DDVINSIRMPSHVQVASVPRNNAKNA 177
G G AHL G+ A+ + + VI VP+ S++ + D +++ ++MP V VA+V AKNA
Sbjct: 62 AGAGGAAHLPGMVASLTSLPVIGVPIPSKNLNGLDSLLSIVQMPYGVPVATVAIGGAKNA 121
Query: 178 ALYAVKVLGIADEDLLERIRKYVEE 202
AL A+++LGI ++L ++I+K+ E+
Sbjct: 122 ALLAIRILGIKYKELADKIKKFSED 146
>sp|Q87KE1|PURE_VIBPA N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio
parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
GN=purE PE=3 SV=1
Length = 161
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
VGIIM S D P M AA L FGV YE K++ H+ + YA SAKERGIK+II G
Sbjct: 3 VGIIMGSKSDWPTMKLAADMLDQFGVSYETKVVSAHRTPQLLADYASSAKERGIKVIIAG 62
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDW-SEDDVINSIRMPSHVQVAS--VPRNNAKNA 177
G AHL G+AAA + + V+ VP+ S D +++ ++MP + V + + A NA
Sbjct: 63 AGGAAHLPGMAAAFTSLPVLGVPVQSRALKGMDSLLSIVQMPKGIAVGTLAIGEAGAANA 122
Query: 178 ALYAVKVLGIADEDLLERIRKYVEE 202
+ A ++LG DE ++ ++ + E
Sbjct: 123 GILAAQILGTHDESIMAKVEAFRNE 147
>sp|P96880|PURE_MYCTU N5-carboxyaminoimidazole ribonucleotide mutase OS=Mycobacterium
tuberculosis GN=purE PE=1 SV=1
Length = 174
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 88/142 (61%), Gaps = 1/142 (0%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P VG+IM SD D PVM DAA L++F +P E++++ H+ + SYA A ERG+++II
Sbjct: 8 PRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAERGLEVII 67
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPL-LSEDWSEDDVINSIRMPSHVQVASVPRNNAKNA 177
G G AHL G+ AA + + VI VP+ L D +++ ++MP+ V VA+V A NA
Sbjct: 68 AGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNA 127
Query: 178 ALYAVKVLGIADEDLLERIRKY 199
L AV++LG A+ L RI +
Sbjct: 128 GLLAVRMLGAANPQLRARIVAF 149
>sp|P46702|PURE_MYCLE N5-carboxyaminoimidazole ribonucleotide mutase OS=Mycobacterium
leprae (strain TN) GN=purE PE=3 SV=1
Length = 171
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
Query: 56 TDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIK 115
T P VG+IM SD D VM DAA L++F +P E++++ H+ E YA +A +R I
Sbjct: 2 TRQPRVGVIMGSDSDWSVMQDAAHALAEFDIPIEVRVVSAHRTPAEMFDYARNAVDRSIA 61
Query: 116 IIIVGDGVEAHLSGVAAANSQILVIRVPL-LSEDWSEDDVINSIRMPSHVQVASVPRNNA 174
+II G G AHL G+ A+ + + VI VP+ L+ D +++ ++MP+ V VA+V A
Sbjct: 62 VIIAGAGGAAHLPGMVASATPLPVIGVPVPLARLDGLDSLLSIVQMPAGVPVATVSIGGA 121
Query: 175 KNAALYAVKVLGIADEDLLERIRKY 199
+NA L AV++LG +D L ++ +
Sbjct: 122 RNAGLLAVRILGSSDLQLRAQLVAF 146
>sp|P12044|PURE_BACSU N5-carboxyaminoimidazole ribonucleotide mutase OS=Bacillus subtilis
(strain 168) GN=purE PE=3 SV=1
Length = 162
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 3/141 (2%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P+VGIIM S D M A L + VPYE K++ H+ YA +A+ERGIK+II
Sbjct: 3 PLVGIIMGSTSDWETMKHACDILDELNVPYEKKVVSAHRTPDFMFEYAETARERGIKVII 62
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDW-SEDDVINSIRMPSHVQVA--SVPRNNAK 175
G G AHL G+ AA + + VI VP+ S+ D +++ ++MP V VA S+ + A
Sbjct: 63 AGAGGAAHLPGMTAAKTTLPVIGVPVQSKALNGMDSLLSIVQMPGGVPVATTSIGKAGAV 122
Query: 176 NAALYAVKVLGIADEDLLERI 196
NA L A ++L DEDL ++
Sbjct: 123 NAGLLAAQILSAFDEDLARKL 143
>sp|Q5E1R4|PURE_VIBF1 N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio fischeri
(strain ATCC 700601 / ES114) GN=purE PE=3 SV=1
Length = 161
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
VGIIM S D P M AA L F VPYE K++ H+ + YA AK+RGIK+II G
Sbjct: 3 VGIIMGSKSDWPTMKLAAEMLDRFNVPYETKVVSAHRTPQLLADYATQAKDRGIKVIIAG 62
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDW-SEDDVINSIRMPSHVQVAS--VPRNNAKNA 177
G AHL G+AAA + + V+ VP+ S D +++ ++MP + V + + A NA
Sbjct: 63 AGGAAHLPGMAAAFTSVPVLGVPVQSRALKGMDSLLSIVQMPKGIAVGTLAIGEAGAANA 122
Query: 178 ALYAVKVLGIADEDLLERIRKYVEE 202
+ A +++G ++E+++ + + +E
Sbjct: 123 GILAAQIIGTSNEEVMAAVEAFRKE 147
>sp|Q55498|PURE_SYNY3 N5-carboxyaminoimidazole ribonucleotide mutase OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=purE PE=3 SV=1
Length = 176
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 91/146 (62%), Gaps = 1/146 (0%)
Query: 55 STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGI 114
++ +P+VGIIM SD DLP M A +F VP E+ I+ H+ + + YA +A +RG+
Sbjct: 2 TSPSPLVGIIMGSDSDLPTMAAAIAVCEEFAVPTEVAIISAHRTPERMVEYAQTAHQRGL 61
Query: 115 KIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNN 173
+III G G AHL G+ AA + + VI VP+ ++ D + SI +MP + VA+V N
Sbjct: 62 RIIIAGAGGAAHLPGMVAALTPLPVIGVPVQTKTLQGVDSLYSIVQMPGGIPVATVAIGN 121
Query: 174 AKNAALYAVKVLGIADEDLLERIRKY 199
AKNA L AV++L + LLE++++Y
Sbjct: 122 AKNAGLLAVQILASHNPVLLEKVQQY 147
>sp|P0CQ37|PUR6_CRYNB Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans
var. neoformans serotype D (strain B-3501A) GN=ADE2 PE=3
SV=1
Length = 582
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P+VGIIM SD DLPVM+ A + L FGVPYE+ I H+ + + YA +A +RG++ II
Sbjct: 412 PLVGIIMGSDSDLPVMHPATKILEKFGVPYELTITSAHRTPERMVKYAKTAADRGLRAII 471
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNNAKNA 177
G G AHL G+ A+ + + VI VP+ + D + SI +MP + A+V NN+ NA
Sbjct: 472 AGAGGAAHLPGMVASETSLPVIGVPVKASVLDGVDSLYSIVQMPRGIPCATVGINNSTNA 531
Query: 178 ALYAVKVLG 186
AL AV++LG
Sbjct: 532 ALLAVRILG 540
>sp|P0CQ36|PUR6_CRYNJ Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans
var. neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ADE2 PE=3 SV=1
Length = 582
Score = 95.1 bits (235), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 82/129 (63%), Gaps = 1/129 (0%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P+VGIIM SD DLPVM+ A + L FGVPYE+ I H+ + + YA +A +RG++ II
Sbjct: 412 PLVGIIMGSDSDLPVMHPATKILEKFGVPYELTITSAHRTPERMVKYAKTAADRGLRAII 471
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNNAKNA 177
G G AHL G+ A+ + + VI VP+ + D + SI +MP + A+V NN+ NA
Sbjct: 472 AGAGGAAHLPGMVASETSLPVIGVPVKASVLDGVDSLYSIVQMPRGIPCATVGINNSTNA 531
Query: 178 ALYAVKVLG 186
AL AV++LG
Sbjct: 532 ALLAVRILG 540
>sp|P0C017|PUR6_CRYNH Phosphoribosylaminoimidazole carboxylase OS=Cryptococcus neoformans
var. grubii serotype A (strain H99 / ATCC 208821 / CBS
10515 / FGSC 9487) GN=ADE2 PE=2 SV=1
Length = 582
Score = 93.6 bits (231), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 86/142 (60%), Gaps = 1/142 (0%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P+VGIIM SD DLPVM+ A + L FGVPYE+ I H+ + + YA +A RG++ II
Sbjct: 412 PLVGIIMGSDSDLPVMHPATKILEKFGVPYELTITSAHRTPERMVKYAKTAAGRGLRAII 471
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASVPRNNAKNA 177
G G AHL G+ A+ + + VI VP+ + D + SI +MP + A+V NN+ NA
Sbjct: 472 AGAGGAAHLPGMVASETSLPVIGVPVKASVLDGVDSLYSIVQMPRGIPCATVGINNSTNA 531
Query: 178 ALYAVKVLGIADEDLLERIRKY 199
AL A+++LG + L + +Y
Sbjct: 532 ALLAIRILGTSVPALNKATEEY 553
>sp|Q7MGL2|PURE_VIBVY N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio vulnificus
(strain YJ016) GN=purE PE=3 SV=1
Length = 161
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
VGIIM S D P M AA L FGV YE K++ H+ YA +AKERG+K+II G
Sbjct: 3 VGIIMGSKSDWPTMKLAAEMLDRFGVEYETKVVSAHRTPHLLAEYASTAKERGLKVIIAG 62
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVAS--VPRNNAKNA 177
G AHL G+AAA + + V+ VP+ S S D + SI +MP + V + + A NA
Sbjct: 63 AGGAAHLPGMAAAFTSLPVLGVPVQSRALSGLDSLYSIVQMPKGIAVGTLAIGEAGAANA 122
Query: 178 ALYAVKVLGIADEDLLERIRKYVEE 202
L A ++LG DE+++ ++ + E
Sbjct: 123 GLLAAQILGTHDENIMAKVEAFRSE 147
>sp|Q8DDD7|PURE_VIBVU N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio vulnificus
(strain CMCP6) GN=purE PE=3 SV=1
Length = 161
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 83/145 (57%), Gaps = 3/145 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
VGIIM S D P M AA L FGV YE K++ H+ YA +AKERG+K+II G
Sbjct: 3 VGIIMGSKSDWPTMKLAAEMLDRFGVEYETKVVSAHRTPHLLAEYASTAKERGLKVIIAG 62
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVAS--VPRNNAKNA 177
G AHL G+AAA + + V+ VP+ S S D + SI +MP + V + + A NA
Sbjct: 63 AGGAAHLPGMAAAFTSLPVLGVPVQSRALSGLDSLYSIVQMPKGIAVGTLAIGEAGAANA 122
Query: 178 ALYAVKVLGIADEDLLERIRKYVEE 202
L A ++LG DE+++ ++ + E
Sbjct: 123 GLLAAQILGTHDENIMAKVEAFRSE 147
>sp|Q9KVT7|PURE_VIBCH N5-carboxyaminoimidazole ribonucleotide mutase OS=Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
GN=purE PE=3 SV=1
Length = 161
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 81/142 (57%), Gaps = 3/142 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
VGIIM S D P M AA L FGV YE K++ H+ YA SAKERG+++II G
Sbjct: 3 VGIIMGSKSDWPTMKHAAEMLDQFGVAYETKVVSAHRTPHLLADYASSAKERGLQVIIAG 62
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVAS--VPRNNAKNA 177
G AHL G+ AA + + V+ VP+ S S D + SI +MP + V + + A NA
Sbjct: 63 AGGAAHLPGMTAAFTSLPVLGVPVQSRALSGLDSLYSIVQMPKGIAVGTLAIGEAGAANA 122
Query: 178 ALYAVKVLGIADEDLLERIRKY 199
L A +++GI + +++ ++ +
Sbjct: 123 GLLAAQIIGIHNPEVMSKVEAF 144
>sp|P72157|PURE_PSEAE N5-carboxyaminoimidazole ribonucleotide mutase OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=purE PE=3 SV=2
Length = 163
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 3/143 (2%)
Query: 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 119
+VG+IM S D ++ A L G+PYE+K++ H+ YA A+ RG+++II
Sbjct: 4 LVGVIMGSKSDWSTLSHTADMLDKLGIPYEVKVVSAHRTPDLLFQYAEEAEGRGLEVIIA 63
Query: 120 GDGVEAHLSGVAAANSQILVIRVPLLSEDWSE-DDVINSIRMPSHVQVAS--VPRNNAKN 176
G G AHL G+ AA + + V+ VP+ S S D +++ ++MP+ V VA+ + + A N
Sbjct: 64 GAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSIVQMPAGVPVATLAIGKAGAVN 123
Query: 177 AALYAVKVLGIADEDLLERIRKY 199
AAL + +LG E ++++
Sbjct: 124 AALLSASILGAKHPQYHEALKQF 146
>sp|Q54QE4|PURCE_DICDI Bifunctional purine synthesis protein purC/E OS=Dictyostelium
discoideum GN=purC/E PE=1 SV=1
Length = 997
Score = 82.4 bits (202), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/114 (40%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Query: 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKI 116
+ P+VGIIM S D M AA TL+ GVP+E +I+ H+ YA +AK RG+KI
Sbjct: 362 NQPLVGIIMGSQSDWETMKLAANTLTTLGVPFETRIVSAHRTPDRLFEYAKTAKSRGLKI 421
Query: 117 IIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSE-DDVINSIRMPSHVQVASV 169
+I G G AHL G+ AA + + V VP+ S+ S D +++ ++MP+ + V +V
Sbjct: 422 VIAGAGGAAHLPGMVAALTPLPVFGVPVQSKALSGVDSLLSIVQMPAGIPVGTV 475
>sp|Q8FYW3|PURE_BRUSU N5-carboxyaminoimidazole ribonucleotide mutase OS=Brucella suis
biovar 1 (strain 1330) GN=purE PE=3 SV=1
Length = 162
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
V IIM S D M AA TL G+ ++ +I+ H+ +++A AK G K+II G
Sbjct: 5 VAIIMGSQSDWETMRHAAHTLEALGISFDARIVSAHRTPDRLVAFAKGAKAEGFKVIIAG 64
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDWS-EDDVINSIRMPSHVQVASV 169
G AHL G+AAA + + V VP+ S+ S +D +++ ++MP+ + V ++
Sbjct: 65 AGGAAHLPGMAAAMTPLPVFGVPVQSKALSGQDSLLSIVQMPAGIPVGTL 114
>sp|P52558|PURE_BRUME N5-carboxyaminoimidazole ribonucleotide mutase OS=Brucella
melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC
10094) GN=purE PE=3 SV=2
Length = 162
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
V IIM S D M+ AA TL G+ ++ +I+ H+ +++A AK G K+II G
Sbjct: 5 VAIIMGSQSDWETMHHAADTLEALGISFDARIVSAHRTPDRLVAFAKGAKAEGFKVIIAG 64
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDWS-EDDVINSIRMPSHVQVASV 169
G AHL G+AAA + + V VP+ S+ S +D +++ ++MP+ + V ++
Sbjct: 65 AGGAAHLPGMAAAMTPLPVFGVPVQSKALSGQDSLLSIVQMPAGIPVGTL 114
>sp|Q58033|PURE_METJA N5-carboxyaminoimidazole ribonucleotide mutase
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=purE PE=1
SV=1
Length = 157
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 83/143 (58%), Gaps = 3/143 (2%)
Query: 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV 119
++ IIM S+ DL + A L +FGV +E+++ H+ + ++K + I
Sbjct: 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKA---DVFIA 57
Query: 120 GDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAAL 179
G+ AHL GV A+ + VI VP+ ++ D +++S++MP + VA+V + +NAA+
Sbjct: 58 IAGLAAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAI 117
Query: 180 YAVKVLGIADEDLLERIRKYVEE 202
A+++L + DE++ +++ +Y E+
Sbjct: 118 LALEILALKDENIAKKLIEYREK 140
>sp|P22348|PURE_METSM Probable N5-carboxyaminoimidazole ribonucleotide mutase
OS=Methanobrevibacter smithii GN=purE PE=3 SV=1
Length = 339
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%)
Query: 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKII 117
P V II+ S D+ + + + L +PY +KI H+ + GIK+
Sbjct: 2 TPKVMIILGSGSDIAIAEKSMKILEKLEIPYSLKIASAHRTPDLVRELVVQGTNAGIKVF 61
Query: 118 IVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNA 177
I G+ AHL G AA + VI VP+ + D + +S++MP VA+V + N
Sbjct: 62 IGIAGLAAHLPGAIAAYTHKPVIGVPVDVKVSGLDALYSSVQMPYPSPVATVGIDRGDNG 121
Query: 178 ALYAVKVLGIADEDLLERI 196
A+ A ++LG+ DE++ +++
Sbjct: 122 AILAARILGLYDEEIRKKV 140
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 4/141 (2%)
Query: 47 EEENPNGDSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 106
EE N + + +A +V II+ DL + TL +P++++++ P ++ K+ +Y
Sbjct: 184 EEFNGSYINKNAEVV-IIVGRHTDLITGKKVSVTLDRLKIPHDMQVICPIRSGKKFRAYV 242
Query: 107 LSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQV 166
+ K KI I + + +SG ++ VI VP +E + +++++ MP V V
Sbjct: 243 NTMKNA--KIFIGINSNSSQVSGGLVGLTEKPVIGVPCENE-LGNNYLLSTVNMPPGVPV 299
Query: 167 ASVPRNNAKNAALYAVKVLGI 187
A+V NN +NAA+ + ++L I
Sbjct: 300 ATVGVNNGRNAAVLSGEILSI 320
>sp|P43849|PURE_HAEIN N5-carboxyaminoimidazole ribonucleotide mutase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=purE PE=3 SV=1
Length = 164
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 3/144 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
+ ++M S D M +A + L + VPY ++++ H+ + +A +A++ G K+II G
Sbjct: 7 IAVVMGSKSDWATMQEATQILDELNVPYHVEVVSAHRTPDKLFEFAENAQKNGYKVIIAG 66
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVAS--VPRNNAKNA 177
G AHL G+ AA + + V+ VP+ S S D + SI +MP + V + + A NA
Sbjct: 67 AGGAAHLPGMIAAKTLVPVLGVPVKSSMLSGVDSLYSIVQMPKGIPVGTLAIGPAGAANA 126
Query: 178 ALYAVKVLGIADEDLLERIRKYVE 201
L A ++L D+ L R++ + E
Sbjct: 127 GLLAAQILAGWDDALFTRLQAFRE 150
>sp|P0AG18|PURE_ECOLI N5-carboxyaminoimidazole ribonucleotide mutase OS=Escherichia coli
(strain K12) GN=purE PE=1 SV=2
Length = 169
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
V I+M S D M AA VP+ ++++ H+ + S+A SA+E G ++II G
Sbjct: 10 VAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAG 69
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASV 169
G AHL G+ AA + + V+ VP+ S S D + SI +MP + V ++
Sbjct: 70 AGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTL 119
>sp|P0AG19|PURE_ECO57 N5-carboxyaminoimidazole ribonucleotide mutase OS=Escherichia coli
O157:H7 GN=purE PE=3 SV=2
Length = 169
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
V I+M S D M AA VP+ ++++ H+ + S+A SA+E G ++II G
Sbjct: 10 VAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAG 69
Query: 121 DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSI-RMPSHVQVASV 169
G AHL G+ AA + + V+ VP+ S S D + SI +MP + V ++
Sbjct: 70 AGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTL 119
>sp|P41654|PURE_METTH Probable N5-carboxyaminoimidazole ribonucleotide mutase
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=purE PE=3 SV=1
Length = 334
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 72/138 (52%)
Query: 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIII 118
P V I++ S D + A + +PY++++ H+ ++ + A + G+++ I
Sbjct: 3 PRVMILLGSASDFRIAEKAMEIFEELRIPYDLRVASAHRTHEKVKAIVSEAVKAGVEVFI 62
Query: 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAA 178
G+ AHL G+ +AN+ VI VP+ + D + +MP VA+V + +NAA
Sbjct: 63 GIAGLSAHLPGMISANTHRPVIGVPVDVKLGGLDALFACSQMPFPAPVATVGVDRGENAA 122
Query: 179 LYAVKVLGIADEDLLERI 196
+ A +++GI D + ER+
Sbjct: 123 ILAAQIIGIGDPGVRERV 140
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
Query: 54 DSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERG 113
DS D P+V +I S D+ + L G+ Y++ ++ P + + Y K
Sbjct: 184 DSQDDPMVSVIPGSYSDMKIAKKTTMFLERMGISYDLNVISPIRYPERFERYL--EKMEN 241
Query: 114 IKIIIVGDGVEAHLSG--VAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPR 171
+K+ I G+ AH++G VA ++ ++ + PL W D +++ I MP V V +V
Sbjct: 242 VKLFIAISGLSAHVTGAVVALSDRPVIGVPCPLKMNGW--DSLLSMINMPPGVPVGTVGV 299
Query: 172 NNAKNAALYAVKVLGIADEDLLERIRK 198
N NAA+ A ++LGI DE + RI++
Sbjct: 300 GNGGNAAILAAEMLGIYDEKIESRIKR 326
>sp|O28997|PURE_ARCFU N5-carboxyaminoimidazole ribonucleotide mutase OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=purE PE=3 SV=1
Length = 180
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 63 IIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122
IIM S DL A L+DFG+ ++I H+ ++ L ++ + + V G
Sbjct: 31 IIMGSKSDLDYSKKIASKLADFGIDAVMRIASAHKTPEKVLEIIKEYEKEDVVFVTVA-G 89
Query: 123 VEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAV 182
LSG AN+ VI P S+ + D+ +SIRMPS VA + A+NAAL
Sbjct: 90 RSNALSGFVDANTSKPVIASPPYSDKFGGADIFSSIRMPSG--VAPMLVLEAENAALAVA 147
Query: 183 KVLGIADEDLLERIRKYVE 201
K+ + DE + E++ ++ E
Sbjct: 148 KIFALKDEGVREKVVQFQE 166
>sp|P22234|PUR6_HUMAN Multifunctional protein ADE2 OS=Homo sapiens GN=PAICS PE=1 SV=3
Length = 425
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
V ++M S DL + +FG+P E+++ H+ E L + GI + V
Sbjct: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 327
Query: 121 -DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAAL 179
G L V + N+ VI P L+ DW DV +S+R+PS + ++V + + +A
Sbjct: 328 VAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVL--SPEGSAQ 385
Query: 180 YAVKVLGIADEDLLERIR 197
+A ++ G+++ + ++R
Sbjct: 386 FAAQIFGLSNHLVWSKLR 403
>sp|Q5RB59|PUR6_PONAB Multifunctional protein ADE2 OS=Pongo abelii GN=PAICS PE=2 SV=3
Length = 425
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 63 IIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG-D 121
++M S DL + +FG+P E+++ H+ E L + GI + V
Sbjct: 270 VLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVA 329
Query: 122 GVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYA 181
G L V N+ VI P L+ DW DV +S+R+PS + +++ + + +A +A
Sbjct: 330 GRSNGLGPVMCGNTAYPVISCPPLTPDWGAQDVWSSLRLPSGLGCSTIL--SPEGSAQFA 387
Query: 182 VKVLGIADEDLLERIR 197
++ G+ + + ++R
Sbjct: 388 AQIFGLNNHLVWSKLR 403
>sp|P38024|PUR6_CHICK Multifunctional protein ADE2 OS=Gallus gallus GN=AIRC PE=2 SV=1
Length = 426
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
V ++M S DL + + FG+P E+++ H+ E L + GI + V
Sbjct: 269 VVVLMGSTSDLGHCEKIKKACATFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 328
Query: 121 -DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAAL 179
G L V + N+ V+ P LS DW DV +S+R+PS + + + + AA
Sbjct: 329 VAGRSNGLGPVMSGNTAYPVVNCPPLSSDWGAQDVWSSLRLPSGLGCPTTL--SPEGAAQ 386
Query: 180 YAVKVLGIADEDLLERIR 197
+A ++ G+ + + ++R
Sbjct: 387 FAAQIFGLNNHLVWAKLR 404
>sp|P51583|PUR6_RAT Multifunctional protein ADE2 OS=Rattus norvegicus GN=Paics PE=2
SV=3
Length = 425
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
V ++M S DL + +FG+P E+++ H+ E L + GI + V
Sbjct: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVA 327
Query: 121 -DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAAL 179
G L V + N+ VI P ++ DW DV +S+R+PS + +++ + + +A
Sbjct: 328 VAGRSNGLGPVMSGNTAYPVISCPPITADWGAQDVWSSLRLPSGIGCSTIL--SPEGSAQ 385
Query: 180 YAVKVLGIADEDLLERIR 197
+A ++ G+ + + ++R
Sbjct: 386 FAAQIFGLNNHLVWAKLR 403
>sp|Q9DCL9|PUR6_MOUSE Multifunctional protein ADE2 OS=Mus musculus GN=Paics PE=1 SV=4
Length = 425
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120
V ++M S DL + +FG+P E+++ H+ E L + GI + V
Sbjct: 268 VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVS 327
Query: 121 -DGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAAL 179
G L V + N+ VI P ++ DW DV +S+R+PS + +++ + + +A
Sbjct: 328 VAGRSNGLGPVLSGNTAYPVISCPPITPDWGAQDVWSSLRLPSGIGCSTIL--SPEGSAQ 385
Query: 180 YAVKVLGIADEDLLERIR 197
+A ++ G+ + + ++R
Sbjct: 386 FAAQIFGLNNHLVWAKLR 403
>sp|Q10457|PUR6_CAEEL Probable multifunctional protein ADE2 OS=Caenorhabditis elegans
GN=B0286.3 PE=1 SV=1
Length = 423
Score = 37.0 bits (84), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 78 ARTLSD----FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG-DGVEAHLSGVAA 132
AR +SD FG+ +K+ H+ + L +E G+ +++ G L V A
Sbjct: 284 ARKISDEAKKFGLETTLKVSSAHKTTSDTLEVIADFEESGVPTVVIAVAGRSNGLGPVIA 343
Query: 133 ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASV 169
NS + VI P SE + D+ +S+RMP+ + +V
Sbjct: 344 GNSSLPVINCPPPSES-TSLDIWSSLRMPNGIGCTTV 379
>sp|Q39242|TRXB2_ARATH Thioredoxin reductase 2 OS=Arabidopsis thaliana GN=NTR2 PE=2 SV=2
Length = 383
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 115 KIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNA 174
K+ IVG G AH + + A+ +++ PLL E W +D+ ++ + V + P
Sbjct: 60 KVCIVGSGPAAHTAAIYASRAELK----PLLFEGWMANDIAPGGQLTTTTDVENFPG--- 112
Query: 175 KNAALYAVKVLGIADEDLLERIRKYVE 201
+ +LGI D++E+ RK E
Sbjct: 113 -----FPEGILGI---DIVEKFRKQSE 131
>sp|Q73F64|TRUA1_BACC1 tRNA pseudouridine synthase A 1 OS=Bacillus cereus (strain ATCC
10987) GN=truA1 PE=3 SV=1
Length = 247
Score = 32.7 bits (73), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 91 KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWS 150
+I P H+ ++ + AL +G + + G A Q++ PL E+W
Sbjct: 19 QIQPQHRTVQQEIEKALQKLHKGELVRVQASG---RTDSTVHAKGQVIHFDTPLSLEEWQ 75
Query: 151 EDDVINSIRMPSHVQVASVPRNNAKNAALYAVK 183
++ +N++ +P + + V + + A Y V+
Sbjct: 76 WNNALNTM-LPDDIVITQVEKKTEEFHARYGVE 107
>sp|A1A1N3|PGK_BIFAA Phosphoglycerate kinase OS=Bifidobacterium adolescentis (strain
ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) GN=pgk PE=3
SV=1
Length = 401
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 82 SDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIV-------GDGV-EAHLSGVAAA 133
+DF VP + + K AL + +E+G K+I++ G V E L+ VAA
Sbjct: 19 ADFNVPLDGTTITDDGRIKAALPTIKALREQGAKVILMAHLGRPKGKVVPELSLAPVAAR 78
Query: 134 NSQILVIRVPLLSEDWSED 152
++L I VPL ++ + ED
Sbjct: 79 LGELLGITVPLAADTYGED 97
>sp|Q6HPM7|TRUA1_BACHK tRNA pseudouridine synthase A 1 OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=truA1 PE=3 SV=1
Length = 247
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 91 KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWS 150
+I P H+ ++ + AL +G + + G A Q++ PL E+W
Sbjct: 19 QIQPQHRTVQQEIEKALQKLHKGELVRVQASG---RTDSTVHAKGQVIHFDTPLSLEEWQ 75
Query: 151 EDDVINSIRMPSHVQVASVPRNNAKNAALYAVK 183
+ +N++ +P + + V + + A Y V+
Sbjct: 76 WSNALNTM-LPDDIVITQVEKKTEEFHARYGVE 107
>sp|Q63H59|TRUA1_BACCZ tRNA pseudouridine synthase A 1 OS=Bacillus cereus (strain ZK /
E33L) GN=truA1 PE=3 SV=1
Length = 247
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 91 KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWS 150
+I P H+ ++ + AL +G + + G A Q++ PL E+W
Sbjct: 19 QIQPQHRTVQQEIEKALQKLHKGELVRVQASG---RTDSTVHAKGQVIHFDTPLSLEEWQ 75
Query: 151 EDDVINSIRMPSHVQVASVPRNNAKNAALYAVK 183
+ +N++ +P + + V + + A Y V+
Sbjct: 76 WSNALNTM-LPDDIVITQVEKKTEEFHARYGVE 107
>sp|Q6I4Q2|TRUA1_BACAN tRNA pseudouridine synthase A 1 OS=Bacillus anthracis GN=truA1 PE=3
SV=1
Length = 247
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 91 KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWS 150
+I P H+ ++ + AL +G + + G A Q++ PL E+W
Sbjct: 19 QIQPQHRTVQQEIEKALQKLHKGELVRVQASG---RTDSTVHAKGQVIHFDTPLSLEEWQ 75
Query: 151 EDDVINSIRMPSHVQVASVPRNNAKNAALYAVK 183
+ +N++ +P + + V + + A Y V+
Sbjct: 76 WSNALNTM-LPDDIVITQVEKKTEEFHARYGVE 107
>sp|Q814C2|TRUA1_BACCR tRNA pseudouridine synthase A 1 OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=truA1 PE=3 SV=2
Length = 247
Score = 30.8 bits (68), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 4/93 (4%)
Query: 91 KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWS 150
+I P H+ ++ + AL +G + + G A Q++ PL E+W
Sbjct: 19 QIQPNHRTVQQEIEKALQKLHKGELVRVQASG---RTDSTVHAKGQVIHFDTPLSLEEWQ 75
Query: 151 EDDVINSIRMPSHVQVASVPRNNAKNAALYAVK 183
+ +N++ +P + + V + + A Y V+
Sbjct: 76 WSNALNTM-LPDDIVIRQVEKKTEEFHARYGVE 107
>sp|Q831Z0|LEPA_ENTFA Elongation factor 4 OS=Enterococcus faecalis (strain ATCC 700802 /
V583) GN=lepA PE=3 SV=1
Length = 611
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 19/114 (16%)
Query: 94 PPHQNCKEALSYALSAKERGIKIIIVGDGVEAH-LSGVAAANSQILVIRVPLLSEDWSED 152
P H + +S +L+A E + ++ G+EA L+ V A L D
Sbjct: 88 PGHVDFTYEVSRSLAACEGAVLVVDAAQGIEAQTLANVYLA-----------LDNDLEIL 136
Query: 153 DVINSIRMPS------HVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYV 200
VIN I +P+ ++ V +A A L + K GI ED+LE++ +YV
Sbjct: 137 PVINKIDLPAADPERVRTEIEDVIGIDASEAVLASAKA-GIGIEDILEQVVEYV 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.359
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,658,356
Number of Sequences: 539616
Number of extensions: 2927409
Number of successful extensions: 7802
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 7728
Number of HSP's gapped (non-prelim): 74
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)