Query 028883
Match_columns 202
No_of_seqs 182 out of 1249
Neff 4.4
Searched_HMMs 29240
Date Mon Mar 25 06:02:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028883.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028883hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ors_A N5-carboxyaminoimidazol 100.0 7E-62 2.4E-66 401.8 14.8 146 57-202 2-150 (163)
2 3lp6_A Phosphoribosylaminoimid 100.0 1.1E-61 3.9E-66 404.0 15.4 147 56-202 5-152 (174)
3 3trh_A Phosphoribosylaminoimid 100.0 1.8E-61 6.3E-66 401.1 16.4 145 58-202 6-153 (169)
4 1xmp_A PURE, phosphoribosylami 100.0 1.9E-61 6.4E-66 401.3 15.2 145 58-202 11-158 (170)
5 3kuu_A Phosphoribosylaminoimid 100.0 3.3E-61 1.1E-65 401.1 15.5 146 57-202 11-159 (174)
6 1o4v_A Phosphoribosylaminoimid 100.0 6E-61 2.1E-65 402.2 15.4 144 59-202 14-158 (183)
7 4grd_A N5-CAIR mutase, phospho 100.0 1.2E-60 4.1E-65 397.3 16.3 149 54-202 8-159 (173)
8 3oow_A Phosphoribosylaminoimid 100.0 9.5E-61 3.2E-65 395.9 15.5 145 58-202 5-152 (166)
9 4b4k_A N5-carboxyaminoimidazol 100.0 1.5E-60 5E-65 399.0 16.3 146 57-202 21-169 (181)
10 1u11_A PURE (N5-carboxyaminoim 100.0 1.8E-60 6.1E-65 399.0 15.4 145 58-202 21-168 (182)
11 3rg8_A Phosphoribosylaminoimid 100.0 1.7E-59 5.8E-64 386.3 16.5 143 58-202 2-145 (159)
12 2ywx_A Phosphoribosylaminoimid 100.0 5.7E-59 1.9E-63 382.5 14.6 139 60-202 1-140 (157)
13 2h31_A Multifunctional protein 100.0 1.6E-54 5.3E-59 401.0 14.8 184 6-201 222-407 (425)
14 3uhj_A Probable glycerol dehyd 97.4 0.0003 1E-08 63.5 7.2 88 59-147 53-141 (387)
15 1jq5_A Glycerol dehydrogenase; 97.3 0.00034 1.2E-08 61.8 6.1 88 59-146 32-120 (370)
16 3ce9_A Glycerol dehydrogenase; 97.0 0.0011 3.7E-08 58.2 6.9 88 59-147 35-123 (354)
17 3bfj_A 1,3-propanediol oxidore 97.0 0.0016 5.4E-08 58.0 7.6 89 59-147 34-145 (387)
18 1o2d_A Alcohol dehydrogenase, 97.0 0.0028 9.4E-08 56.4 8.8 89 59-147 41-151 (371)
19 1ta9_A Glycerol dehydrogenase; 96.8 0.0013 4.4E-08 60.6 5.6 86 60-146 93-179 (450)
20 3ox4_A Alcohol dehydrogenase 2 96.8 0.0017 5.9E-08 58.1 6.2 89 59-147 32-141 (383)
21 3okf_A 3-dehydroquinate syntha 96.8 0.0049 1.7E-07 56.2 9.0 88 58-145 62-158 (390)
22 1sg6_A Pentafunctional AROM po 96.7 0.0036 1.2E-07 56.2 7.4 87 59-145 37-140 (393)
23 3hl0_A Maleylacetate reductase 96.7 0.0016 5.4E-08 58.0 5.0 86 59-146 35-121 (353)
24 1rrm_A Lactaldehyde reductase; 96.6 0.0021 7.1E-08 57.1 5.4 88 59-146 32-142 (386)
25 3jzd_A Iron-containing alcohol 96.5 0.0026 8.8E-08 56.8 5.1 86 59-146 37-123 (358)
26 1vlj_A NADH-dependent butanol 96.5 0.0094 3.2E-07 53.6 8.6 87 59-147 44-154 (407)
27 2gru_A 2-deoxy-scyllo-inosose 96.1 0.024 8.3E-07 50.4 9.2 86 59-145 35-129 (368)
28 1oj7_A Hypothetical oxidoreduc 96.0 0.011 3.9E-07 52.9 6.5 85 59-147 51-162 (408)
29 3qbe_A 3-dehydroquinate syntha 95.9 0.018 6.1E-07 52.0 7.6 86 59-145 44-138 (368)
30 2pju_A Propionate catabolism o 95.9 0.16 5.6E-06 42.8 13.0 128 60-201 14-152 (225)
31 1xah_A Sadhqs, 3-dehydroquinat 95.7 0.012 4.2E-07 51.8 5.4 86 59-146 32-126 (354)
32 3iv7_A Alcohol dehydrogenase I 95.6 0.013 4.3E-07 52.5 5.1 84 59-146 38-122 (364)
33 1ujn_A Dehydroquinate synthase 95.4 0.017 5.8E-07 51.1 5.2 82 59-145 29-119 (348)
34 3m9w_A D-xylose-binding peripl 95.3 0.95 3.3E-05 37.0 16.8 84 58-143 2-90 (313)
35 3egc_A Putative ribose operon 95.3 0.75 2.6E-05 37.1 14.3 83 57-143 7-94 (291)
36 2q5c_A NTRC family transcripti 95.2 0.21 7.2E-06 40.8 10.9 126 59-201 5-140 (196)
37 3l49_A ABC sugar (ribose) tran 95.1 1.1 3.6E-05 36.0 15.4 85 57-143 4-93 (291)
38 3kke_A LACI family transcripti 94.8 0.63 2.2E-05 38.1 12.7 107 58-185 15-127 (303)
39 1kq3_A Glycerol dehydrogenase; 94.6 0.0048 1.6E-07 54.7 -0.6 85 59-146 42-128 (376)
40 3clh_A 3-dehydroquinate syntha 94.0 0.02 7E-07 50.4 2.2 85 59-145 27-120 (343)
41 3o1i_D Periplasmic protein TOR 93.8 1.5 5E-05 35.3 12.7 84 57-142 4-93 (304)
42 2iks_A DNA-binding transcripti 93.6 2.4 8.3E-05 34.2 14.5 127 57-201 19-162 (293)
43 3gv0_A Transcriptional regulat 93.5 1.3 4.5E-05 35.8 12.0 83 57-143 7-96 (288)
44 3k4h_A Putative transcriptiona 93.5 1.5 5.2E-05 35.1 12.2 83 57-143 7-99 (292)
45 3rf7_A Iron-containing alcohol 93.4 0.071 2.4E-06 47.9 4.6 86 59-147 54-162 (375)
46 3jy6_A Transcriptional regulat 93.3 2.6 8.8E-05 33.7 14.1 82 57-143 6-92 (276)
47 3o74_A Fructose transport syst 93.1 2.6 8.8E-05 33.2 13.3 110 59-186 3-117 (272)
48 3dbi_A Sugar-binding transcrip 93.1 2.8 9.5E-05 34.8 13.7 84 57-143 60-150 (338)
49 3miz_A Putative transcriptiona 93.0 0.89 3.1E-05 37.0 10.3 81 57-142 12-98 (301)
50 3lft_A Uncharacterized protein 93.0 0.73 2.5E-05 37.8 9.8 83 59-144 3-91 (295)
51 3s99_A Basic membrane lipoprot 93.0 2.8 9.6E-05 36.9 14.2 87 56-142 24-116 (356)
52 1dbq_A Purine repressor; trans 92.9 3 0.0001 33.3 14.2 85 57-143 6-94 (289)
53 3huu_A Transcription regulator 92.8 2 6.8E-05 35.0 12.1 83 57-143 21-113 (305)
54 3l6u_A ABC-type sugar transpor 92.7 3.1 0.00011 33.2 14.6 85 57-143 7-96 (293)
55 2rgy_A Transcriptional regulat 92.5 3.3 0.00011 33.4 13.0 83 57-143 7-97 (290)
56 1mjh_A Protein (ATP-binding do 92.4 0.83 2.8E-05 33.9 8.7 68 75-146 86-161 (162)
57 2qh8_A Uncharacterized protein 92.2 1.2 4.1E-05 36.7 10.2 86 55-143 5-97 (302)
58 3hcw_A Maltose operon transcri 92.1 1.5 5.1E-05 35.7 10.5 83 57-143 6-98 (295)
59 3qk7_A Transcriptional regulat 92.0 2.9 9.8E-05 34.0 12.2 110 57-186 5-123 (294)
60 3lkv_A Uncharacterized conserv 91.9 0.88 3E-05 38.1 9.2 87 54-144 4-98 (302)
61 3h75_A Periplasmic sugar-bindi 91.9 4.8 0.00017 33.5 14.7 84 58-144 3-94 (350)
62 1tjy_A Sugar transport protein 91.5 2.2 7.5E-05 35.3 11.1 83 59-143 4-92 (316)
63 2rjo_A Twin-arginine transloca 91.5 5.2 0.00018 33.0 15.1 86 57-144 4-96 (332)
64 3kjx_A Transcriptional regulat 91.5 3.2 0.00011 34.6 12.1 82 57-142 67-153 (344)
65 2h3h_A Sugar ABC transporter, 91.1 5.4 0.00018 32.5 14.4 83 59-143 2-89 (313)
66 1tq8_A Hypothetical protein RV 91.1 1.7 6E-05 32.9 9.3 71 72-146 81-160 (163)
67 1jx6_A LUXP protein; protein-l 91.0 5.8 0.0002 32.7 14.1 85 57-142 42-134 (342)
68 3brs_A Periplasmic binding pro 91.0 5 0.00017 31.9 13.7 84 58-143 5-97 (289)
69 3gyb_A Transcriptional regulat 90.9 1.7 5.7E-05 34.7 9.5 80 57-143 4-86 (280)
70 3ksm_A ABC-type sugar transpor 90.7 4.9 0.00017 31.6 12.0 83 59-143 1-91 (276)
71 3k9c_A Transcriptional regulat 90.6 5.8 0.0002 32.0 13.0 81 57-143 11-95 (289)
72 3gbv_A Putative LACI-family tr 90.6 5.5 0.00019 31.8 14.5 88 57-144 7-102 (304)
73 3bbl_A Regulatory protein of L 90.6 4.2 0.00014 32.7 11.7 82 58-143 4-94 (287)
74 3jvd_A Transcriptional regulat 90.5 3.3 0.00011 34.5 11.4 77 57-142 63-142 (333)
75 2qv7_A Diacylglycerol kinase D 90.5 0.57 2E-05 40.4 6.8 85 59-147 25-117 (337)
76 3rot_A ABC sugar transporter, 90.5 6 0.00021 32.0 16.0 84 59-144 4-94 (297)
77 3c3k_A Alanine racemase; struc 90.4 5.9 0.0002 31.8 12.9 81 57-142 7-92 (285)
78 3idf_A USP-like protein; unive 90.4 1.2 4.3E-05 31.9 7.6 64 74-143 68-138 (138)
79 2vk2_A YTFQ, ABC transporter p 90.3 3.3 0.00011 33.7 11.0 83 59-143 3-90 (306)
80 2fvy_A D-galactose-binding per 90.3 3.2 0.00011 33.3 10.8 84 59-143 3-91 (309)
81 3dlo_A Universal stress protei 90.3 1.7 5.7E-05 32.8 8.5 68 73-142 79-154 (155)
82 3d02_A Putative LACI-type tran 90.1 6.3 0.00021 31.6 13.1 83 58-142 4-92 (303)
83 3msz_A Glutaredoxin 1; alpha-b 90.0 0.37 1.3E-05 32.3 4.1 78 60-159 5-83 (89)
84 3zyw_A Glutaredoxin-3; metal b 89.9 0.99 3.4E-05 33.2 6.8 74 59-159 16-93 (111)
85 2fn9_A Ribose ABC transporter, 89.9 6.5 0.00022 31.4 15.8 83 59-143 3-90 (290)
86 2dum_A Hypothetical protein PH 89.8 2.5 8.5E-05 31.6 9.1 69 74-146 80-158 (170)
87 2qu7_A Putative transcriptiona 89.8 6.6 0.00023 31.4 12.2 79 58-143 8-91 (288)
88 3bil_A Probable LACI-family tr 89.7 5.4 0.00018 33.5 12.1 82 58-143 66-152 (348)
89 8abp_A L-arabinose-binding pro 89.7 4.4 0.00015 32.6 11.1 82 59-143 3-89 (306)
90 3g1w_A Sugar ABC transporter; 89.4 7.3 0.00025 31.3 15.3 84 59-144 5-94 (305)
91 3h5o_A Transcriptional regulat 89.2 8.6 0.00029 31.8 14.4 82 57-142 61-147 (339)
92 3s3t_A Nucleotide-binding prot 89.1 1 3.5E-05 32.6 6.3 65 75-143 72-146 (146)
93 2fep_A Catabolite control prot 89.1 7.7 0.00026 31.3 14.1 83 57-143 15-102 (289)
94 2x7x_A Sensor protein; transfe 89.0 8.6 0.00029 31.6 14.2 84 57-143 5-94 (325)
95 3uug_A Multiple sugar-binding 88.7 6 0.00021 32.2 11.4 86 57-144 2-92 (330)
96 1f0k_A MURG, UDP-N-acetylgluco 88.6 9.2 0.00031 31.4 12.5 76 114-199 255-333 (364)
97 3loq_A Universal stress protei 88.3 8.3 0.00028 31.4 12.0 73 70-146 212-292 (294)
98 3d8u_A PURR transcriptional re 88.3 8.1 0.00028 30.5 12.6 80 59-142 4-88 (275)
99 2gm3_A Unknown protein; AT3G01 88.2 2.1 7.2E-05 32.3 7.7 69 74-146 89-165 (175)
100 3tb6_A Arabinose metabolism tr 88.2 8.5 0.00029 30.5 14.2 83 59-143 16-106 (298)
101 3brq_A HTH-type transcriptiona 88.1 8.6 0.00029 30.5 13.6 83 57-143 18-108 (296)
102 3e3m_A Transcriptional regulat 87.9 11 0.00037 31.5 14.4 82 57-142 69-155 (355)
103 3clk_A Transcription regulator 87.6 8.1 0.00028 31.0 11.4 83 57-143 7-95 (290)
104 2dri_A D-ribose-binding protei 87.5 9.5 0.00032 30.3 16.3 82 59-142 2-88 (271)
105 1qpz_A PURA, protein (purine n 87.5 11 0.00038 31.1 13.8 84 57-142 57-144 (340)
106 1aba_A Glutaredoxin; electron 87.4 2.1 7E-05 29.3 6.6 64 70-157 13-85 (87)
107 1gud_A ALBP, D-allose-binding 86.8 8 0.00027 31.1 10.9 82 59-142 2-90 (288)
108 2hsg_A Glucose-resistance amyl 86.6 12 0.00042 30.7 12.6 83 57-143 59-146 (332)
109 2ioy_A Periplasmic sugar-bindi 86.4 10 0.00036 30.3 11.4 82 59-142 2-88 (283)
110 3fg9_A Protein of universal st 85.6 5.5 0.00019 29.2 8.7 67 74-143 81-156 (156)
111 2dgd_A 223AA long hypothetical 85.1 4.7 0.00016 32.5 8.6 79 59-140 109-200 (223)
112 1byk_A Protein (trehalose oper 84.5 13 0.00044 29.1 14.3 80 59-142 3-85 (255)
113 2fqx_A Membrane lipoprotein TM 84.5 9.4 0.00032 32.0 10.6 82 58-142 4-92 (318)
114 3hs3_A Ribose operon repressor 83.9 15 0.00051 29.3 12.9 80 57-143 9-92 (277)
115 3s81_A Putative aspartate race 83.8 4.1 0.00014 34.8 8.1 82 58-143 26-129 (268)
116 3u7r_A NADPH-dependent FMN red 83.8 8.9 0.0003 30.9 9.8 91 59-151 3-119 (190)
117 4fn4_A Short chain dehydrogena 83.7 4.3 0.00015 34.2 8.1 46 59-110 7-52 (254)
118 1jye_A Lactose operon represso 83.6 15 0.00052 30.6 11.5 83 57-142 60-148 (349)
119 3h8q_A Thioredoxin reductase 3 83.5 2.6 8.9E-05 30.6 5.9 75 59-159 17-92 (114)
120 2z08_A Universal stress protei 83.0 3.8 0.00013 29.4 6.6 65 75-143 60-137 (137)
121 3s40_A Diacylglycerol kinase; 82.9 3.9 0.00013 34.8 7.6 84 59-147 9-100 (304)
122 2o20_A Catabolite control prot 82.6 19 0.00065 29.6 14.1 82 57-142 62-148 (332)
123 2bon_A Lipid kinase; DAG kinas 82.3 5.4 0.00019 34.3 8.4 85 59-147 30-121 (332)
124 3qmx_A Glutaredoxin A, glutare 82.2 6.9 0.00024 27.9 7.7 76 56-159 13-89 (99)
125 3gx8_A Monothiol glutaredoxin- 82.0 2.9 0.0001 31.2 5.8 74 59-159 16-96 (121)
126 3mt0_A Uncharacterized protein 82.0 5.7 0.00019 32.4 8.0 75 68-145 47-129 (290)
127 2xed_A Putative maleate isomer 81.6 10 0.00035 32.0 9.8 80 59-140 147-237 (273)
128 3olq_A Universal stress protei 81.4 4 0.00014 33.5 6.9 67 77-146 78-152 (319)
129 2hqb_A Transcriptional activat 81.4 5.8 0.0002 32.9 8.0 83 58-142 5-93 (296)
130 3e61_A Putative transcriptiona 81.2 8.4 0.00029 30.5 8.6 81 57-143 7-93 (277)
131 2wem_A Glutaredoxin-related pr 80.9 3.9 0.00013 30.6 6.2 74 59-159 20-98 (118)
132 3hgm_A Universal stress protei 80.6 6.9 0.00023 28.0 7.3 65 73-141 71-146 (147)
133 2o6l_A UDP-glucuronosyltransfe 80.0 16 0.00055 27.1 10.0 129 58-201 21-166 (170)
134 2h0a_A TTHA0807, transcription 79.8 20 0.00067 28.2 10.3 78 61-142 2-84 (276)
135 3ctp_A Periplasmic binding pro 79.6 24 0.00083 28.9 13.8 80 57-142 59-141 (330)
136 3tnj_A Universal stress protei 79.4 7.3 0.00025 28.2 7.1 61 81-145 80-148 (150)
137 1efp_B ETF, protein (electron 78.7 12 0.00042 31.6 9.2 80 59-142 57-146 (252)
138 3g85_A Transcriptional regulat 78.5 2.3 8E-05 34.0 4.5 84 57-143 10-98 (289)
139 1efv_B Electron transfer flavo 77.9 16 0.00053 31.1 9.7 80 59-142 60-149 (255)
140 4eg0_A D-alanine--D-alanine li 77.3 4 0.00014 34.2 5.8 80 57-146 12-101 (317)
141 1x60_A Sporulation-specific N- 76.9 13 0.00045 25.1 7.4 60 59-119 8-76 (79)
142 3ipz_A Monothiol glutaredoxin- 76.8 9.4 0.00032 27.5 7.0 74 59-159 18-95 (109)
143 1o97_C Electron transferring f 76.5 14 0.00047 31.5 8.9 80 59-142 58-145 (264)
144 3tla_A MCCF; serine protease, 76.1 7.7 0.00026 34.8 7.6 81 59-141 44-143 (371)
145 1q77_A Hypothetical protein AQ 73.3 8.6 0.00029 27.4 6.0 52 87-143 87-138 (138)
146 2q62_A ARSH; alpha/beta, flavo 72.8 40 0.0014 28.1 11.0 86 58-147 34-147 (247)
147 4g81_D Putative hexonate dehyd 72.7 13 0.00043 31.3 7.7 26 59-86 9-34 (255)
148 1nvm_A HOA, 4-hydroxy-2-oxoval 72.5 7.8 0.00027 33.9 6.6 69 63-132 111-181 (345)
149 3dzc_A UDP-N-acetylglucosamine 72.5 8 0.00028 33.7 6.7 37 106-142 104-141 (396)
150 3sr3_A Microcin immunity prote 72.2 21 0.0007 31.3 9.2 79 59-141 14-113 (336)
151 3ab8_A Putative uncharacterize 72.2 23 0.00079 28.1 8.9 67 74-146 76-151 (268)
152 4h1h_A LMO1638 protein; MCCF-l 71.7 15 0.00051 32.0 8.2 82 59-142 13-113 (327)
153 1f76_A Dihydroorotate dehydrog 71.6 14 0.00046 31.7 7.8 37 85-122 211-247 (336)
154 1e2b_A Enzyme IIB-cellobiose; 71.4 16 0.00056 26.7 7.2 71 60-141 5-80 (106)
155 3fdx_A Putative filament prote 71.4 21 0.00073 25.3 7.8 63 76-143 70-143 (143)
156 1nyt_A Shikimate 5-dehydrogena 70.6 20 0.00068 29.7 8.4 60 59-125 119-192 (271)
157 1jmv_A USPA, universal stress 70.1 23 0.00077 25.1 7.6 62 79-145 71-139 (141)
158 2i2c_A Probable inorganic poly 70.0 3.4 0.00012 34.9 3.5 64 60-145 2-70 (272)
159 3ot5_A UDP-N-acetylglucosamine 70.0 7.2 0.00025 34.2 5.8 39 105-143 106-145 (403)
160 3k1y_A Oxidoreductase; structu 69.9 40 0.0014 26.9 12.3 102 57-160 10-149 (191)
161 3oti_A CALG3; calicheamicin, T 69.5 24 0.00082 29.7 8.8 125 57-201 231-377 (398)
162 3otg_A CALG1; calicheamicin, T 69.4 23 0.00079 29.6 8.6 126 57-200 241-387 (412)
163 3l4n_A Monothiol glutaredoxin- 69.3 7.5 0.00025 29.4 5.0 75 59-159 14-92 (127)
164 4eys_A MCCC family protein; MC 68.7 21 0.00071 31.4 8.5 82 59-141 6-110 (346)
165 1tvm_A PTS system, galactitol- 68.3 24 0.00082 26.0 7.6 72 59-147 22-97 (113)
166 3rsc_A CALG2; TDP, enediyne, s 67.9 53 0.0018 27.5 11.0 128 56-201 245-393 (415)
167 2hqb_A Transcriptional activat 67.9 48 0.0017 27.2 10.2 81 58-142 126-210 (296)
168 3cis_A Uncharacterized protein 67.8 25 0.00084 28.8 8.3 67 74-146 84-163 (309)
169 3loq_A Universal stress protei 66.9 9 0.00031 31.2 5.4 68 74-146 88-164 (294)
170 3iwt_A 178AA long hypothetical 66.5 24 0.00083 27.4 7.7 75 57-134 14-106 (178)
171 3ixl_A Amdase, arylmalonate de 66.1 55 0.0019 27.0 10.3 80 59-141 118-210 (240)
172 1pfk_A Phosphofructokinase; tr 65.0 5.1 0.00017 35.5 3.8 48 99-146 80-127 (320)
173 3ia7_A CALG4; glycosysltransfe 64.9 45 0.0015 27.5 9.5 128 56-201 229-378 (402)
174 4a3s_A 6-phosphofructokinase; 64.9 5.2 0.00018 35.2 3.8 47 100-146 80-126 (319)
175 3hut_A Putative branched-chain 64.9 40 0.0014 27.5 9.0 84 59-142 5-102 (358)
176 3egl_A DEGV family protein; al 64.8 59 0.002 27.7 10.4 112 60-202 5-136 (277)
177 3r5x_A D-alanine--D-alanine li 64.8 5.3 0.00018 32.9 3.6 79 59-146 4-91 (307)
178 1zxx_A 6-phosphofructokinase; 64.6 5.6 0.00019 35.2 4.0 47 100-146 80-126 (319)
179 3pzy_A MOG; ssgcid, seattle st 64.3 12 0.00042 29.4 5.6 79 56-137 5-94 (164)
180 4e5s_A MCCFLIKE protein (BA_56 64.2 18 0.00061 31.7 7.1 81 59-141 13-112 (331)
181 3gi1_A LBP, laminin-binding pr 64.2 32 0.0011 29.1 8.6 75 82-157 194-273 (286)
182 1m3s_A Hypothetical protein YC 64.1 38 0.0013 25.8 8.3 81 60-146 39-134 (186)
183 2l2q_A PTS system, cellobiose- 64.1 20 0.00068 26.1 6.3 75 60-145 6-85 (109)
184 3mt0_A Uncharacterized protein 63.9 24 0.00081 28.6 7.4 65 78-146 205-278 (290)
185 1usg_A Leucine-specific bindin 63.8 33 0.0011 27.7 8.2 83 60-142 4-99 (346)
186 3olq_A Universal stress protei 63.8 30 0.001 28.1 8.1 65 78-146 234-307 (319)
187 3ipc_A ABC transporter, substr 63.7 58 0.002 26.5 9.8 58 84-141 40-98 (356)
188 2qjg_A Putative aldolase MJ040 63.7 59 0.002 26.5 10.0 80 62-142 119-208 (273)
189 3ab8_A Putative uncharacterize 63.6 28 0.00095 27.6 7.7 17 75-91 202-218 (268)
190 1pea_A Amidase operon; gene re 63.6 46 0.0016 27.7 9.3 86 57-142 6-105 (385)
191 3tjr_A Short chain dehydrogena 63.6 35 0.0012 28.3 8.5 42 59-106 31-72 (301)
192 1nvt_A Shikimate 5'-dehydrogen 63.0 20 0.00067 29.9 6.9 59 59-125 128-205 (287)
193 2jfq_A Glutamate racemase; cel 62.8 2.2 7.5E-05 36.5 0.9 81 59-143 23-115 (286)
194 2yan_A Glutaredoxin-3; oxidore 62.6 28 0.00096 24.3 6.8 73 60-159 18-94 (105)
195 2fvy_A D-galactose-binding per 62.5 42 0.0014 26.6 8.6 116 59-185 141-269 (309)
196 3ahc_A Phosphoketolase, xylulo 62.3 40 0.0014 33.8 9.9 128 59-200 660-801 (845)
197 1zl0_A Hypothetical protein PA 62.1 34 0.0012 29.8 8.5 82 59-141 18-115 (311)
198 3h7a_A Short chain dehydrogena 62.0 33 0.0011 27.6 7.9 43 59-107 7-49 (252)
199 1jeo_A MJ1247, hypothetical pr 61.8 41 0.0014 25.4 8.1 77 62-144 43-134 (180)
200 1jfl_A Aspartate racemase; alp 61.7 15 0.00052 29.6 5.8 82 59-142 2-103 (228)
201 2pjk_A 178AA long hypothetical 61.6 27 0.00094 27.7 7.2 78 57-137 14-109 (178)
202 2b99_A Riboflavin synthase; lu 61.1 11 0.00039 30.3 4.9 114 59-187 3-132 (156)
203 1di6_A MOGA, molybdenum cofact 61.0 37 0.0013 27.6 8.0 75 58-134 3-91 (195)
204 1ejb_A Lumazine synthase; anal 60.7 33 0.0011 27.8 7.6 63 58-120 16-87 (168)
205 2wte_A CSA3; antiviral protein 60.7 59 0.002 27.1 9.5 76 59-135 35-117 (244)
206 1wik_A Thioredoxin-like protei 60.6 24 0.00084 24.9 6.2 73 60-159 16-92 (109)
207 3ic4_A Glutaredoxin (GRX-1); s 60.3 35 0.0012 22.7 7.1 34 59-94 12-45 (92)
208 2qh8_A Uncharacterized protein 60.1 67 0.0023 26.0 11.3 112 58-187 140-260 (302)
209 3s2u_A UDP-N-acetylglucosamine 59.4 82 0.0028 26.7 12.1 77 114-198 253-333 (365)
210 1iir_A Glycosyltransferase GTF 59.3 82 0.0028 26.7 10.3 125 59-201 239-380 (415)
211 2fzv_A Putative arsenical resi 59.2 46 0.0016 28.6 8.7 87 57-147 57-172 (279)
212 4f2d_A L-arabinose isomerase; 59.1 91 0.0031 29.0 11.3 85 59-143 7-104 (500)
213 3rhb_A ATGRXC5, glutaredoxin-C 59.0 13 0.00044 26.3 4.4 73 60-158 20-94 (113)
214 1mkz_A Molybdenum cofactor bio 58.8 63 0.0022 25.3 9.9 81 57-140 9-100 (172)
215 3lft_A Uncharacterized protein 58.7 70 0.0024 25.7 11.4 109 59-186 134-252 (295)
216 1rvv_A Riboflavin synthase; tr 58.6 30 0.001 27.7 6.9 117 58-187 12-149 (154)
217 3ucx_A Short chain dehydrogena 58.4 36 0.0012 27.4 7.6 26 59-86 11-36 (264)
218 1uta_A FTSN, MSGA, cell divisi 58.4 14 0.00047 25.4 4.3 64 59-122 8-80 (81)
219 4fs3_A Enoyl-[acyl-carrier-pro 58.2 19 0.00066 29.3 5.9 47 59-109 6-52 (256)
220 3sju_A Keto reductase; short-c 58.1 33 0.0011 28.1 7.3 44 58-107 23-66 (279)
221 3nrc_A Enoyl-[acyl-carrier-pro 57.9 32 0.0011 28.0 7.2 65 59-125 26-115 (280)
222 2bd0_A Sepiapterin reductase; 57.3 57 0.0019 25.4 8.4 25 60-86 3-27 (244)
223 2nx9_A Oxaloacetate decarboxyl 57.2 44 0.0015 30.8 8.7 60 61-120 116-178 (464)
224 2h3h_A Sugar ABC transporter, 57.1 38 0.0013 27.4 7.5 118 58-185 123-249 (313)
225 3nzn_A Glutaredoxin; structura 56.9 28 0.00096 24.2 5.9 34 59-94 22-55 (103)
226 4gqr_A Pancreatic alpha-amylas 56.6 4.6 0.00016 35.1 1.9 48 72-119 23-96 (496)
227 2vvt_A Glutamate racemase; iso 56.5 2.5 8.7E-05 36.2 0.2 82 59-143 25-117 (290)
228 2klx_A Glutaredoxin; thioredox 56.1 31 0.001 23.0 5.8 43 59-107 6-48 (89)
229 3s99_A Basic membrane lipoprot 55.4 1E+02 0.0034 26.9 10.4 83 57-145 148-238 (356)
230 1zuw_A Glutamate racemase 1; ( 55.3 4.4 0.00015 34.2 1.6 76 60-142 5-96 (272)
231 3v8b_A Putative dehydrogenase, 54.9 51 0.0017 27.0 8.1 44 59-108 28-71 (283)
232 3czc_A RMPB; alpha/beta sandwi 54.8 15 0.00053 26.8 4.3 72 59-143 19-93 (110)
233 3ftp_A 3-oxoacyl-[acyl-carrier 54.3 39 0.0013 27.5 7.2 27 58-86 27-53 (270)
234 2obx_A DMRL synthase 1, 6,7-di 54.1 28 0.00096 27.9 6.1 61 58-121 11-78 (157)
235 3qvl_A Putative hydantoin race 54.1 13 0.00043 31.1 4.2 81 60-142 3-97 (245)
236 3nyw_A Putative oxidoreductase 54.0 52 0.0018 26.3 7.8 43 59-107 7-49 (250)
237 1hqk_A 6,7-dimethyl-8-ribityll 53.9 31 0.0011 27.5 6.3 117 58-187 12-149 (154)
238 2an1_A Putative kinase; struct 53.6 35 0.0012 28.4 6.9 84 59-144 6-95 (292)
239 2l69_A Rossmann 2X3 fold prote 53.2 36 0.0012 26.1 6.2 48 68-117 58-105 (134)
240 3op4_A 3-oxoacyl-[acyl-carrier 53.2 53 0.0018 26.2 7.7 60 59-124 9-94 (248)
241 3t7c_A Carveol dehydrogenase; 53.1 83 0.0028 25.8 9.1 26 59-86 28-53 (299)
242 3qiv_A Short-chain dehydrogena 53.1 69 0.0024 25.2 8.3 41 59-105 9-49 (253)
243 3uve_A Carveol dehydrogenase ( 52.9 79 0.0027 25.5 8.8 32 58-93 10-41 (286)
244 2wm8_A MDP-1, magnesium-depend 52.9 56 0.0019 24.6 7.4 60 59-122 85-146 (187)
245 2jah_A Clavulanic acid dehydro 52.8 65 0.0022 25.6 8.2 26 59-86 7-32 (247)
246 3tov_A Glycosyl transferase fa 52.7 12 0.00041 32.1 3.9 29 114-146 262-290 (349)
247 3cs3_A Sugar-binding transcrip 52.6 83 0.0028 24.7 10.3 75 57-142 7-86 (277)
248 2x8g_A Thioredoxin glutathione 52.5 35 0.0012 31.1 7.2 31 59-91 18-48 (598)
249 2khp_A Glutaredoxin; thioredox 52.3 49 0.0017 22.0 8.3 45 59-107 6-50 (92)
250 2wci_A Glutaredoxin-4; redox-a 52.1 41 0.0014 25.5 6.5 74 59-159 35-112 (135)
251 1g2h_A Transcriptional regulat 52.0 6.5 0.00022 26.0 1.7 21 180-200 38-58 (61)
252 3rht_A (gatase1)-like protein; 51.9 11 0.00038 32.2 3.5 29 58-87 4-32 (259)
253 3grk_A Enoyl-(acyl-carrier-pro 51.7 49 0.0017 27.3 7.5 65 59-125 31-121 (293)
254 2wul_A Glutaredoxin related pr 51.5 58 0.002 24.5 7.2 74 59-159 20-98 (118)
255 1fov_A Glutaredoxin 3, GRX3; a 51.5 45 0.0015 21.3 7.8 37 69-107 9-45 (82)
256 3tfo_A Putative 3-oxoacyl-(acy 51.4 61 0.0021 26.5 7.9 26 59-86 4-29 (264)
257 3pgx_A Carveol dehydrogenase; 51.3 94 0.0032 25.0 9.0 26 59-86 15-40 (280)
258 2vzf_A NADH-dependent FMN redu 51.3 55 0.0019 25.4 7.4 82 59-144 3-110 (197)
259 4hwg_A UDP-N-acetylglucosamine 51.3 38 0.0013 29.6 7.0 35 109-143 90-124 (385)
260 1z0s_A Probable inorganic poly 51.1 29 0.00098 30.0 6.1 69 60-145 31-100 (278)
261 2pbq_A Molybdenum cofactor bio 51.1 60 0.0021 25.5 7.6 76 57-135 4-94 (178)
262 3hno_A Pyrophosphate-dependent 51.0 12 0.00042 34.2 3.9 49 97-146 88-143 (419)
263 3r1i_A Short-chain type dehydr 50.8 47 0.0016 27.2 7.1 26 59-86 32-57 (276)
264 2oho_A Glutamate racemase; iso 50.7 4.9 0.00017 33.8 1.1 82 59-143 13-105 (273)
265 2fqx_A Membrane lipoprotein TM 50.5 1.1E+02 0.0037 25.4 10.8 65 60-124 131-199 (318)
266 3imf_A Short chain dehydrogena 50.5 61 0.0021 25.9 7.7 43 59-107 6-48 (257)
267 3rfq_A Pterin-4-alpha-carbinol 50.1 32 0.0011 27.8 5.9 125 55-195 27-177 (185)
268 3fst_A 5,10-methylenetetrahydr 49.8 56 0.0019 28.4 7.8 51 73-123 70-120 (304)
269 4ibo_A Gluconate dehydrogenase 49.8 61 0.0021 26.4 7.7 43 59-107 26-68 (271)
270 2dwu_A Glutamate racemase; iso 49.5 6.7 0.00023 33.1 1.8 81 59-142 8-99 (276)
271 1u0t_A Inorganic polyphosphate 49.2 24 0.00081 30.1 5.2 85 59-144 5-107 (307)
272 1zem_A Xylitol dehydrogenase; 48.8 64 0.0022 25.8 7.6 41 59-105 7-47 (262)
273 3pk0_A Short-chain dehydrogena 48.8 88 0.003 25.1 8.4 42 59-106 10-51 (262)
274 4eso_A Putative oxidoreductase 48.6 85 0.0029 25.1 8.3 60 59-124 8-93 (255)
275 3l4e_A Uncharacterized peptida 48.4 41 0.0014 27.3 6.3 78 59-143 28-120 (206)
276 3fxa_A SIS domain protein; str 48.4 68 0.0023 24.7 7.4 79 60-144 47-145 (201)
277 3lkv_A Uncharacterized conserv 48.2 1.1E+02 0.0039 25.0 10.2 113 59-189 141-262 (302)
278 1ae1_A Tropinone reductase-I; 48.1 82 0.0028 25.4 8.2 41 59-105 21-61 (273)
279 3sx2_A Putative 3-ketoacyl-(ac 48.0 96 0.0033 24.8 8.5 26 59-86 13-38 (278)
280 1v95_A Nuclear receptor coacti 47.9 51 0.0017 25.6 6.5 60 59-121 9-68 (130)
281 1ooe_A Dihydropteridine reduct 47.6 98 0.0033 24.1 8.6 62 59-124 3-83 (236)
282 3tox_A Short chain dehydrogena 47.5 70 0.0024 26.2 7.8 43 59-107 8-50 (280)
283 1vkr_A Mannitol-specific PTS s 47.4 46 0.0016 25.0 6.1 72 58-145 13-88 (125)
284 1p77_A Shikimate 5-dehydrogena 47.4 59 0.002 26.9 7.3 60 59-125 119-192 (272)
285 1rqb_A Transcarboxylase 5S sub 47.3 69 0.0023 30.3 8.5 72 61-132 133-207 (539)
286 1iow_A DD-ligase, DDLB, D-ALA\ 47.3 57 0.002 26.2 7.1 78 59-145 3-89 (306)
287 2zat_A Dehydrogenase/reductase 47.2 79 0.0027 25.1 7.8 40 59-104 14-53 (260)
288 3gaf_A 7-alpha-hydroxysteroid 47.2 77 0.0026 25.3 7.8 26 59-86 12-37 (256)
289 4g85_A Histidine-tRNA ligase, 47.2 88 0.003 28.4 9.0 60 57-120 418-477 (517)
290 4fc7_A Peroxisomal 2,4-dienoyl 47.1 64 0.0022 26.2 7.4 26 59-86 27-52 (277)
291 4fgs_A Probable dehydrogenase 47.0 52 0.0018 27.8 7.0 64 59-124 29-114 (273)
292 1geg_A Acetoin reductase; SDR 46.9 86 0.003 24.8 8.0 24 60-85 3-26 (256)
293 3h5t_A Transcriptional regulat 46.9 1.2E+02 0.0042 25.0 11.3 84 57-143 67-158 (366)
294 3f9i_A 3-oxoacyl-[acyl-carrier 46.8 67 0.0023 25.2 7.3 46 56-107 11-56 (249)
295 3o8o_A 6-phosphofructokinase s 46.8 12 0.00042 37.1 3.3 45 101-146 471-523 (787)
296 1di0_A Lumazine synthase; tran 46.7 33 0.0011 27.5 5.4 61 58-121 10-77 (158)
297 1yo6_A Putative carbonyl reduc 46.6 94 0.0032 23.8 8.0 65 59-125 3-93 (250)
298 2qq5_A DHRS1, dehydrogenase/re 46.5 75 0.0026 25.3 7.6 26 59-86 5-30 (260)
299 2ae2_A Protein (tropinone redu 46.4 1E+02 0.0034 24.5 8.3 40 59-104 9-48 (260)
300 4da9_A Short-chain dehydrogena 46.4 88 0.003 25.5 8.2 27 58-86 28-54 (280)
301 2b4q_A Rhamnolipids biosynthes 46.2 86 0.003 25.5 8.1 41 59-105 29-69 (276)
302 3nq4_A 6,7-dimethyl-8-ribityll 46.2 78 0.0027 25.3 7.5 118 57-187 11-150 (156)
303 1rrv_A Glycosyltransferase GTF 46.0 1.2E+02 0.004 25.7 9.1 126 59-201 238-381 (416)
304 2f48_A Diphosphate--fructose-6 45.9 14 0.00049 35.1 3.5 46 99-145 152-204 (555)
305 3gdg_A Probable NADP-dependent 45.8 57 0.002 25.9 6.8 28 59-86 20-47 (267)
306 3uxy_A Short-chain dehydrogena 45.7 79 0.0027 25.6 7.7 63 59-125 28-106 (266)
307 3lyl_A 3-oxoacyl-(acyl-carrier 45.2 90 0.0031 24.4 7.8 26 59-86 5-30 (247)
308 2cfc_A 2-(R)-hydroxypropyl-COM 45.1 1.1E+02 0.0036 23.8 8.2 25 60-86 3-27 (250)
309 3e7l_A Transcriptional regulat 45.1 9.8 0.00034 25.1 1.7 21 180-200 37-57 (63)
310 2cw6_A Hydroxymethylglutaryl-C 45.0 58 0.002 27.5 7.0 71 60-131 96-187 (298)
311 4imr_A 3-oxoacyl-(acyl-carrier 44.8 57 0.002 26.6 6.8 26 59-86 33-58 (275)
312 2rhc_B Actinorhodin polyketide 44.8 96 0.0033 25.1 8.1 41 59-105 22-62 (277)
313 3kzv_A Uncharacterized oxidore 44.7 1.2E+02 0.004 24.1 8.8 62 59-124 2-89 (254)
314 2lqo_A Putative glutaredoxin R 44.6 31 0.0011 24.5 4.5 44 60-107 5-48 (92)
315 2dtx_A Glucose 1-dehydrogenase 44.5 1.1E+02 0.0039 24.5 8.5 62 59-124 8-85 (264)
316 3uce_A Dehydrogenase; rossmann 44.4 95 0.0033 24.0 7.8 60 59-124 6-70 (223)
317 1rtt_A Conserved hypothetical 44.4 79 0.0027 24.2 7.2 87 59-147 7-119 (193)
318 2prs_A High-affinity zinc upta 44.2 51 0.0018 27.6 6.5 61 81-142 188-252 (284)
319 3rkr_A Short chain oxidoreduct 44.2 99 0.0034 24.6 8.0 44 59-108 29-72 (262)
320 3gr7_A NADPH dehydrogenase; fl 44.1 89 0.003 27.1 8.2 40 84-123 208-252 (340)
321 3h4t_A Glycosyltransferase GTF 43.9 1.4E+02 0.0048 25.3 9.3 129 58-201 221-363 (404)
322 4e3z_A Putative oxidoreductase 43.7 1E+02 0.0034 24.7 8.0 27 59-87 26-52 (272)
323 1vl8_A Gluconate 5-dehydrogena 43.6 1.1E+02 0.0037 24.7 8.2 42 58-105 20-61 (267)
324 1c2y_A Protein (lumazine synth 43.6 47 0.0016 26.6 5.8 117 58-187 13-149 (156)
325 2c92_A 6,7-dimethyl-8-ribityll 43.5 50 0.0017 26.5 6.0 117 58-187 17-152 (160)
326 3p19_A BFPVVD8, putative blue 43.4 1E+02 0.0035 25.0 8.0 62 59-124 16-98 (266)
327 3fvw_A Putative NAD(P)H-depend 43.3 98 0.0034 24.1 7.7 87 59-147 3-121 (192)
328 3pxx_A Carveol dehydrogenase; 43.2 1.2E+02 0.0043 24.1 9.8 26 59-86 10-35 (287)
329 2q5c_A NTRC family transcripti 43.1 46 0.0016 26.7 5.8 70 59-140 95-164 (196)
330 1qsg_A Enoyl-[acyl-carrier-pro 43.1 89 0.003 24.9 7.5 65 59-125 9-99 (265)
331 2i0f_A 6,7-dimethyl-8-ribityll 42.8 59 0.002 26.0 6.3 62 59-120 13-80 (157)
332 2eq5_A 228AA long hypothetical 42.8 1.2E+02 0.0042 23.8 10.2 84 58-142 6-103 (228)
333 1ntc_A Protein (nitrogen regul 42.7 15 0.0005 26.0 2.5 22 180-201 69-90 (91)
334 3oec_A Carveol dehydrogenase ( 42.6 1.1E+02 0.0038 25.4 8.4 26 59-86 46-71 (317)
335 4dry_A 3-oxoacyl-[acyl-carrier 42.5 44 0.0015 27.4 5.7 44 58-107 32-75 (281)
336 1sqs_A Conserved hypothetical 42.5 1.3E+02 0.0044 24.0 8.5 83 60-146 3-126 (242)
337 1xq1_A Putative tropinone redu 42.4 98 0.0033 24.4 7.6 41 59-105 14-54 (266)
338 3t4x_A Oxidoreductase, short c 42.3 80 0.0027 25.3 7.2 43 59-107 10-52 (267)
339 3kl9_A PEPA, glutamyl aminopep 42.3 80 0.0027 27.6 7.7 87 66-196 263-352 (355)
340 1uzm_A 3-oxoacyl-[acyl-carrier 42.3 1.2E+02 0.004 24.0 8.1 62 59-124 15-92 (247)
341 3u5t_A 3-oxoacyl-[acyl-carrier 42.2 1.1E+02 0.0039 24.7 8.2 28 58-87 26-53 (267)
342 4hoj_A REGF protein; GST, glut 42.2 34 0.0012 26.2 4.7 31 72-102 13-43 (210)
343 2ftp_A Hydroxymethylglutaryl-C 42.1 67 0.0023 27.2 7.0 58 72-131 124-190 (302)
344 3p6l_A Sugar phosphate isomera 42.0 87 0.003 24.7 7.3 54 69-122 60-113 (262)
345 4evq_A Putative ABC transporte 41.9 76 0.0026 25.9 7.1 86 57-142 15-112 (375)
346 1umq_A Photosynthetic apparatu 41.9 8.4 0.00029 27.6 1.0 21 180-200 59-79 (81)
347 2xhz_A KDSD, YRBH, arabinose 5 41.7 1.1E+02 0.0036 23.0 7.4 79 60-144 51-149 (183)
348 4fe7_A Xylose operon regulator 41.7 93 0.0032 26.6 7.9 75 58-143 25-104 (412)
349 3vtz_A Glucose 1-dehydrogenase 41.6 1.4E+02 0.0047 24.1 8.9 66 55-124 10-92 (269)
350 3un1_A Probable oxidoreductase 41.5 1E+02 0.0035 24.8 7.7 62 59-124 28-107 (260)
351 3ble_A Citramalate synthase fr 41.3 56 0.0019 28.4 6.5 70 62-131 113-200 (337)
352 1yb1_A 17-beta-hydroxysteroid 41.3 1.3E+02 0.0045 24.0 8.4 45 58-108 30-74 (272)
353 4dqx_A Probable oxidoreductase 41.2 1E+02 0.0035 25.1 7.8 60 59-124 27-112 (277)
354 3tpc_A Short chain alcohol deh 41.1 1.2E+02 0.004 24.0 8.0 62 59-124 7-92 (257)
355 1nff_A Putative oxidoreductase 41.1 1.1E+02 0.0038 24.4 7.9 40 59-104 7-46 (260)
356 3qel_B Glutamate [NMDA] recept 41.1 67 0.0023 27.4 6.9 83 60-142 6-96 (364)
357 1b73_A Glutamate racemase; iso 41.1 14 0.00047 30.6 2.4 80 60-142 2-92 (254)
358 3orf_A Dihydropteridine reduct 41.1 1.3E+02 0.0044 23.8 8.2 63 58-124 21-98 (251)
359 2pd4_A Enoyl-[acyl-carrier-pro 41.1 86 0.0029 25.2 7.2 65 59-125 6-96 (275)
360 3etn_A Putative phosphosugar i 41.0 1.3E+02 0.0045 23.9 8.3 80 60-145 61-162 (220)
361 3n0w_A ABC branched chain amin 41.0 1.5E+02 0.0051 24.4 8.9 85 58-142 6-103 (379)
362 1w0m_A TIM, triosephosphate is 41.0 50 0.0017 27.6 5.9 65 78-145 78-143 (226)
363 2gzm_A Glutamate racemase; enz 41.0 11 0.00037 31.6 1.7 81 60-143 5-96 (267)
364 1fui_A L-fucose isomerase; ket 40.9 2.5E+02 0.0084 26.8 11.7 110 57-169 5-138 (591)
365 3opy_B 6-phosphofructo-1-kinas 40.9 17 0.00058 36.9 3.4 45 101-146 650-702 (941)
366 3l77_A Short-chain alcohol deh 40.8 1E+02 0.0034 23.9 7.4 44 59-108 2-45 (235)
367 3o26_A Salutaridine reductase; 40.7 65 0.0022 25.7 6.4 27 58-86 11-37 (311)
368 1psw_A ADP-heptose LPS heptosy 40.6 12 0.00041 31.0 1.9 81 57-145 179-289 (348)
369 3a28_C L-2.3-butanediol dehydr 40.5 1.1E+02 0.0038 24.2 7.7 25 60-86 3-27 (258)
370 3svt_A Short-chain type dehydr 40.5 1.3E+02 0.0045 24.2 8.3 44 59-108 11-54 (281)
371 2ct6_A SH3 domain-binding glut 40.5 23 0.00079 25.5 3.3 79 60-159 9-94 (111)
372 4g84_A Histidine--tRNA ligase, 40.3 95 0.0033 27.3 7.9 59 58-120 366-424 (464)
373 3osu_A 3-oxoacyl-[acyl-carrier 40.1 1.1E+02 0.0039 24.0 7.7 27 98-124 65-93 (246)
374 2fwm_X 2,3-dihydro-2,3-dihydro 40.1 1.4E+02 0.0047 23.6 8.5 62 59-124 7-85 (250)
375 1eto_A FIS, factor for inversi 39.9 12 0.00043 27.3 1.7 21 180-200 76-96 (98)
376 3td9_A Branched chain amino ac 39.7 63 0.0022 26.4 6.3 82 59-143 150-237 (366)
377 3dii_A Short-chain dehydrogena 39.7 1.2E+02 0.004 24.0 7.7 60 59-124 2-86 (247)
378 3opy_A 6-phosphofructo-1-kinas 39.5 14 0.00046 37.8 2.4 46 100-146 675-728 (989)
379 3tsc_A Putative oxidoreductase 39.5 1.3E+02 0.0045 24.1 8.1 26 59-86 11-36 (277)
380 4h15_A Short chain alcohol deh 39.5 1.4E+02 0.0048 24.6 8.4 63 59-125 11-90 (261)
381 1e7w_A Pteridine reductase; di 39.4 1.1E+02 0.0038 25.0 7.7 56 59-119 9-65 (291)
382 4dyv_A Short-chain dehydrogena 39.4 98 0.0034 25.2 7.4 60 59-124 28-113 (272)
383 3zwt_A Dihydroorotate dehydrog 39.3 1.1E+02 0.0037 27.1 8.1 51 70-121 197-255 (367)
384 3r3s_A Oxidoreductase; structu 38.9 1.2E+02 0.004 24.9 7.8 26 59-86 49-74 (294)
385 3ff4_A Uncharacterized protein 38.9 39 0.0013 25.3 4.5 66 58-123 4-92 (122)
386 3ai3_A NADPH-sorbose reductase 38.8 1.3E+02 0.0043 23.9 7.8 26 59-86 7-32 (263)
387 3grp_A 3-oxoacyl-(acyl carrier 38.8 1.3E+02 0.0046 24.2 8.1 61 58-124 26-112 (266)
388 3out_A Glutamate racemase; str 38.8 14 0.00047 31.4 2.1 81 59-142 8-100 (268)
389 4b79_A PA4098, probable short- 38.8 1.6E+02 0.0054 24.5 8.6 60 59-124 11-89 (242)
390 3v2g_A 3-oxoacyl-[acyl-carrier 38.7 1.4E+02 0.0047 24.2 8.1 26 59-86 31-56 (271)
391 3sho_A Transcriptional regulat 38.7 1.2E+02 0.0042 22.7 9.5 57 61-117 41-118 (187)
392 3o8l_A 6-phosphofructokinase, 38.4 32 0.0011 34.0 4.8 92 51-143 393-526 (762)
393 4a26_A Putative C-1-tetrahydro 37.9 1.1E+02 0.0036 26.9 7.7 60 59-118 39-100 (300)
394 3rih_A Short chain dehydrogena 37.9 94 0.0032 25.7 7.1 44 58-107 40-83 (293)
395 2nm0_A Probable 3-oxacyl-(acyl 37.8 1.6E+02 0.0053 23.6 8.6 62 59-124 21-98 (253)
396 3i1j_A Oxidoreductase, short c 37.8 1.2E+02 0.0042 23.5 7.5 44 59-108 14-57 (247)
397 3lt0_A Enoyl-ACP reductase; tr 37.7 67 0.0023 26.9 6.2 29 59-87 2-30 (329)
398 3n74_A 3-ketoacyl-(acyl-carrie 37.7 1.2E+02 0.0041 23.9 7.4 60 59-124 9-94 (261)
399 1xkq_A Short-chain reductase f 37.7 1.1E+02 0.0039 24.5 7.5 40 59-104 6-45 (280)
400 2pju_A Propionate catabolism o 37.7 64 0.0022 26.8 6.0 71 59-141 107-177 (225)
401 3rd5_A Mypaa.01249.C; ssgcid, 37.7 1.5E+02 0.0051 23.9 8.2 58 59-124 16-97 (291)
402 1kz1_A 6,7-dimethyl-8-ribityll 37.6 92 0.0031 25.0 6.7 118 58-187 17-156 (159)
403 2uvd_A 3-oxoacyl-(acyl-carrier 37.5 1.3E+02 0.0045 23.6 7.7 26 99-124 66-93 (246)
404 3cis_A Uncharacterized protein 37.5 1.2E+02 0.0041 24.6 7.6 55 85-145 245-307 (309)
405 4dmm_A 3-oxoacyl-[acyl-carrier 37.4 1.2E+02 0.0043 24.4 7.7 26 59-86 28-53 (269)
406 4egf_A L-xylulose reductase; s 37.4 1.1E+02 0.0038 24.5 7.3 26 59-86 20-45 (266)
407 2dxa_A Protein YBAK; trans-edi 37.2 17 0.00059 28.0 2.2 53 68-120 2-58 (166)
408 3l6e_A Oxidoreductase, short-c 37.0 1.5E+02 0.0052 23.3 8.2 41 59-105 3-43 (235)
409 4e6p_A Probable sorbitol dehyd 37.0 1.4E+02 0.0047 23.7 7.8 60 59-124 8-93 (259)
410 2vo9_A EAD500, L-alanyl-D-glut 36.9 24 0.00082 28.4 3.1 60 70-131 34-97 (179)
411 3cxt_A Dehydrogenase with diff 36.9 1.2E+02 0.004 25.0 7.5 40 59-104 34-73 (291)
412 3b0p_A TRNA-dihydrouridine syn 36.9 1.7E+02 0.0058 25.3 8.9 53 70-122 110-166 (350)
413 1uuy_A CNX1, molybdopterin bio 36.8 97 0.0033 23.9 6.6 79 57-138 4-100 (167)
414 1iy8_A Levodione reductase; ox 36.8 1.5E+02 0.0053 23.5 8.0 26 59-86 13-38 (267)
415 4b4u_A Bifunctional protein fo 36.8 31 0.0011 30.5 4.0 52 73-129 162-238 (303)
416 3c5y_A Ribose/galactose isomer 36.6 15 0.00052 31.5 2.0 77 59-135 20-112 (231)
417 3f1l_A Uncharacterized oxidore 36.6 92 0.0031 24.7 6.6 43 59-107 12-54 (252)
418 1o1x_A Ribose-5-phosphate isom 36.6 31 0.0011 27.8 3.7 76 59-134 11-97 (155)
419 1f0k_A MURG, UDP-N-acetylgluco 36.5 1.4E+02 0.0049 24.1 7.9 37 106-143 89-126 (364)
420 1a4i_A Methylenetetrahydrofola 36.4 91 0.0031 27.4 7.0 61 57-129 164-224 (301)
421 2vsy_A XCC0866; transferase, g 36.4 1.7E+02 0.0057 25.7 8.8 22 176-197 508-530 (568)
422 3oid_A Enoyl-[acyl-carrier-pro 36.4 1.6E+02 0.0055 23.5 8.1 26 59-86 4-29 (258)
423 3l07_A Bifunctional protein fo 36.3 1.2E+02 0.0039 26.5 7.6 60 59-118 36-97 (285)
424 3kvo_A Hydroxysteroid dehydrog 36.3 1.2E+02 0.0042 25.9 7.8 62 59-124 45-140 (346)
425 3i09_A Periplasmic branched-ch 36.3 1.4E+02 0.0046 24.6 7.8 84 59-142 5-101 (375)
426 3ojc_A Putative aspartate/glut 36.3 20 0.00067 29.5 2.6 41 101-142 64-105 (231)
427 3tzq_B Short-chain type dehydr 36.1 1.7E+02 0.0057 23.5 8.2 60 59-124 11-96 (271)
428 1hg3_A Triosephosphate isomera 36.1 51 0.0017 27.5 5.1 65 78-145 81-146 (225)
429 3mmz_A Putative HAD family hyd 35.7 1.3E+02 0.0045 22.5 7.2 60 59-126 56-115 (176)
430 1dhr_A Dihydropteridine reduct 35.7 1.5E+02 0.0052 23.1 7.8 62 59-124 7-87 (241)
431 1oaa_A Sepiapterin reductase; 35.6 1.3E+02 0.0045 23.7 7.4 23 59-83 6-28 (259)
432 4hi7_A GI20122; GST, glutathio 35.5 60 0.0021 25.1 5.2 36 72-107 13-48 (228)
433 4a5o_A Bifunctional protein fo 35.2 1.3E+02 0.0043 26.3 7.7 60 59-118 37-98 (286)
434 3v2h_A D-beta-hydroxybutyrate 34.9 1.7E+02 0.0059 23.7 8.2 26 59-86 25-50 (281)
435 2ekc_A AQ_1548, tryptophan syn 34.9 1.1E+02 0.0039 25.3 7.1 34 59-92 18-52 (262)
436 1xhl_A Short-chain dehydrogena 34.9 1.3E+02 0.0046 24.7 7.6 41 59-105 26-66 (297)
437 3ak4_A NADH-dependent quinucli 34.7 1.2E+02 0.0041 24.0 7.0 60 59-124 12-97 (263)
438 1nm3_A Protein HI0572; hybrid, 34.7 58 0.002 25.8 5.1 36 59-96 170-205 (241)
439 1efp_A ETF, protein (electron 34.6 92 0.0032 26.9 6.7 80 59-144 30-114 (307)
440 3p2o_A Bifunctional protein fo 34.4 1.3E+02 0.0045 26.1 7.7 61 58-118 34-96 (285)
441 2ztj_A Homocitrate synthase; ( 34.4 1.7E+02 0.0057 25.8 8.5 70 60-131 90-175 (382)
442 3tbf_A Glucosamine--fructose-6 34.2 1.5E+02 0.0051 25.8 8.1 62 60-121 228-311 (372)
443 3hh8_A Metal ABC transporter s 34.1 2E+02 0.0068 24.3 8.7 61 81-142 197-261 (294)
444 1ydn_A Hydroxymethylglutaryl-C 34.1 87 0.003 26.2 6.3 51 70-120 118-175 (295)
445 3cx3_A Lipoprotein; zinc-bindi 34.1 72 0.0025 26.7 5.8 62 82-144 192-257 (284)
446 1uay_A Type II 3-hydroxyacyl-C 34.1 1.6E+02 0.0053 22.5 8.3 62 59-124 2-77 (242)
447 1yde_A Retinal dehydrogenase/r 34.0 1.8E+02 0.0063 23.3 8.4 60 59-124 9-93 (270)
448 3rpe_A MDAB, modulator of drug 34.0 1.5E+02 0.0053 24.2 7.7 60 56-120 23-90 (218)
449 3hbm_A UDP-sugar hydrolase; PS 33.8 1.4E+02 0.0049 25.1 7.7 82 58-145 157-253 (282)
450 1xp2_A EAD500, PLY500, L-alany 33.7 35 0.0012 28.1 3.6 56 74-131 41-97 (179)
451 2is8_A Molybdopterin biosynthe 33.6 74 0.0025 24.6 5.4 77 59-138 2-91 (164)
452 1x1t_A D(-)-3-hydroxybutyrate 33.6 1.5E+02 0.0051 23.4 7.5 26 59-86 4-29 (260)
453 3ksu_A 3-oxoacyl-acyl carrier 33.6 1.6E+02 0.0054 23.6 7.6 28 97-124 73-102 (262)
454 3gvc_A Oxidoreductase, probabl 33.6 1E+02 0.0036 25.1 6.6 60 59-124 29-114 (277)
455 1sny_A Sniffer CG10964-PA; alp 33.5 1.7E+02 0.0059 22.9 7.8 33 59-93 21-54 (267)
456 3edm_A Short chain dehydrogena 33.5 1.7E+02 0.0059 23.2 7.9 26 59-86 8-33 (259)
457 3hba_A Putative phosphosugar i 33.4 1.3E+02 0.0045 25.8 7.5 64 59-122 204-289 (334)
458 3gbv_A Putative LACI-family tr 33.3 1.2E+02 0.0042 23.7 6.8 114 59-185 136-265 (304)
459 4eyg_A Twin-arginine transloca 33.3 1.5E+02 0.005 24.1 7.5 81 59-141 140-228 (368)
460 3g23_A Peptidase U61, LD-carbo 33.2 71 0.0024 27.1 5.7 81 59-141 4-103 (274)
461 1ehi_A LMDDL2, D-alanine:D-lac 33.2 80 0.0027 27.2 6.1 29 59-87 4-38 (377)
462 1vgv_A UDP-N-acetylglucosamine 33.0 1.3E+02 0.0044 24.6 7.1 40 104-143 77-117 (384)
463 1gz6_A Estradiol 17 beta-dehyd 33.0 1.7E+02 0.0058 24.5 8.0 46 59-108 9-61 (319)
464 3ezl_A Acetoacetyl-COA reducta 32.9 91 0.0031 24.5 6.0 30 55-86 9-38 (256)
465 2x9g_A PTR1, pteridine reducta 32.8 1.7E+02 0.0058 23.6 7.8 26 59-86 23-48 (288)
466 2h6r_A Triosephosphate isomera 32.8 1.7E+02 0.006 23.5 7.8 46 78-123 75-121 (219)
467 3uf0_A Short-chain dehydrogena 32.7 2E+02 0.0067 23.3 8.9 32 59-94 31-62 (273)
468 2p91_A Enoyl-[acyl-carrier-pro 32.6 1.2E+02 0.004 24.5 6.7 62 59-124 21-110 (285)
469 1jlj_A Gephyrin; globular alph 32.5 1.8E+02 0.0063 23.1 7.8 77 57-136 13-105 (189)
470 2c2x_A Methylenetetrahydrofola 32.5 87 0.003 27.2 6.2 63 57-129 157-219 (281)
471 1fjh_A 3alpha-hydroxysteroid d 32.4 1.3E+02 0.0046 23.3 6.9 59 60-125 2-74 (257)
472 1jub_A Dihydroorotate dehydrog 32.3 1.5E+02 0.0053 24.5 7.6 51 59-111 95-155 (311)
473 2e6f_A Dihydroorotate dehydrog 32.2 1.9E+02 0.0066 24.0 8.2 72 70-142 144-250 (314)
474 2z1n_A Dehydrogenase; reductas 32.2 1.8E+02 0.0062 22.9 7.7 40 59-104 7-46 (260)
475 2hig_A 6-phospho-1-fructokinas 32.2 22 0.00075 33.4 2.5 52 94-146 170-228 (487)
476 2z1k_A (NEO)pullulanase; hydro 32.2 93 0.0032 27.4 6.5 52 69-120 47-117 (475)
477 3bg3_A Pyruvate carboxylase, m 32.2 1.6E+02 0.0055 28.7 8.6 71 60-131 213-292 (718)
478 3ih5_A Electron transfer flavo 32.0 63 0.0022 26.4 5.0 78 59-141 38-120 (217)
479 3lf2_A Short chain oxidoreduct 31.9 1.2E+02 0.0041 24.3 6.6 43 59-107 8-50 (265)
480 3can_A Pyruvate-formate lyase- 31.9 1.6E+02 0.0055 22.1 7.8 50 69-118 107-180 (182)
481 1wdv_A Hypothetical protein AP 31.9 40 0.0014 25.2 3.5 47 74-120 2-49 (152)
482 2o7s_A DHQ-SDH PR, bifunctiona 31.9 1E+02 0.0035 28.1 6.9 58 59-123 364-434 (523)
483 2zsk_A PH1733, 226AA long hypo 31.8 27 0.00092 28.1 2.7 39 103-142 63-102 (226)
484 4gpa_A Glutamate receptor 4; P 31.5 1.9E+02 0.0065 23.4 7.9 66 59-125 131-196 (389)
485 1y5e_A Molybdenum cofactor bio 31.4 1.8E+02 0.0061 22.4 9.4 76 57-135 12-98 (169)
486 2ew8_A (S)-1-phenylethanol deh 31.4 1.9E+02 0.0065 22.7 8.5 26 59-86 7-32 (249)
487 3oig_A Enoyl-[acyl-carrier-pro 31.3 1.9E+02 0.0066 22.8 8.2 65 59-125 7-99 (266)
488 1lu9_A Methylene tetrahydromet 31.1 2.1E+02 0.0073 23.3 8.2 45 59-109 119-163 (287)
489 1o5i_A 3-oxoacyl-(acyl carrier 31.0 1.4E+02 0.0049 23.6 6.9 62 55-124 15-92 (249)
490 1mxh_A Pteridine reductase 2; 31.0 1.6E+02 0.0054 23.4 7.2 26 59-86 11-36 (276)
491 3ksu_A 3-oxoacyl-acyl carrier 31.0 1.9E+02 0.0065 23.1 7.7 57 59-119 11-68 (262)
492 1jub_A Dihydroorotate dehydrog 31.0 1.4E+02 0.0048 24.8 7.1 51 70-121 142-193 (311)
493 3gem_A Short chain dehydrogena 30.9 1.3E+02 0.0044 24.2 6.7 62 59-124 27-110 (260)
494 2o23_A HADH2 protein; HSD17B10 30.8 1.9E+02 0.0065 22.5 8.4 60 59-124 12-97 (265)
495 3ngx_A Bifunctional protein fo 30.8 1.2E+02 0.0041 26.3 6.8 53 59-112 29-82 (276)
496 2kpo_A Rossmann 2X2 fold prote 30.8 1.6E+02 0.0056 21.8 7.0 54 61-122 5-60 (110)
497 3m1a_A Putative dehydrogenase; 30.7 1.3E+02 0.0044 24.0 6.6 26 59-86 5-30 (281)
498 2c07_A 3-oxoacyl-(acyl-carrier 30.7 2.1E+02 0.0071 23.0 8.3 25 59-85 44-68 (285)
499 1ydo_A HMG-COA lyase; TIM-barr 30.7 1.7E+02 0.0059 25.0 7.8 73 60-133 97-190 (307)
500 3sc4_A Short chain dehydrogena 30.6 1.4E+02 0.0049 24.2 7.0 26 59-86 9-34 (285)
No 1
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=100.00 E-value=7e-62 Score=401.75 Aligned_cols=146 Identities=34% Similarity=0.577 Sum_probs=142.4
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccC
Q 028883 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQ 136 (202)
Q Consensus 57 ~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~ 136 (202)
+.++|+|||||+||+|+|+||+++|++||++||++|+|+||+|+++.+|+++++++|++|||++|||+||||||+|++|+
T Consensus 2 ~~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~ 81 (163)
T 3ors_A 2 NAMKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTT 81 (163)
T ss_dssp -CCCEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCS
T ss_pred CCCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhccC
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 137 ILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 137 ~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~--n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
+||||||+++++|+|+| ||||||||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 82 ~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 150 (163)
T 3ors_A 82 LPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESS 150 (163)
T ss_dssp SCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCTHHHHHHHHHHHH
T ss_pred CCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999999999999999 9999999999999999999 999999999999999999999999999973
No 2
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=100.00 E-value=1.1e-61 Score=403.96 Aligned_cols=147 Identities=39% Similarity=0.635 Sum_probs=143.0
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc
Q 028883 56 TDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 135 (202)
Q Consensus 56 ~~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T 135 (202)
.++++|+|||||+||+|+|+||+++|++||++||++|+|+||+|+++.+|+++++++|++|||++|||+||||||+||+|
T Consensus 5 ~~~~~V~IimgS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t 84 (174)
T 3lp6_A 5 GERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAAT 84 (174)
T ss_dssp -CCCSEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHHHHHTCCEEEEEEESSCCHHHHHHHHC
T ss_pred CCCCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEECCCCCHHHHHHHHHHHHhCCCCEEEEecCchhhhHHHHHhcc
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 136 QILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 136 ~~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
++||||||+++++++|+| ||||||||+|+||+||+|||++|||++|+|||+++|++||+||++||++
T Consensus 85 ~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I~~~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 152 (174)
T 3lp6_A 85 PLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIGGAGNAGLLAVRMLGAANPQLRARIVAFQDR 152 (174)
T ss_dssp SSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEcCcchHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999988999999 9999999999999999999999999999999999999999999999963
No 3
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=100.00 E-value=1.8e-61 Score=401.14 Aligned_cols=145 Identities=32% Similarity=0.532 Sum_probs=142.3
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 137 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~ 137 (202)
.|+|+|||||+||+|+|+||+++|++|||+||++|+|+||+|+++.+|+++++++|++|||++|||+||||||+||+|++
T Consensus 6 ~~~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~ 85 (169)
T 3trh_A 6 KIFVAILMGSDSDLSTMETAFTELKSLGIPFEAHILSAHRTPKETVEFVENADNRGCAVFIAAAGLAAHLAGTIAAHTLK 85 (169)
T ss_dssp CCEEEEEESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHHHTTEEEEEEEECSSCCHHHHHHHTCSS
T ss_pred CCcEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhcCCC
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 138 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 138 PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~--n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
||||||+++++|+|+| ||||||||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 86 PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 153 (169)
T 3trh_A 86 PVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIALQDKSIAQKLVQQRTA 153 (169)
T ss_dssp CEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999998999999 9999999999999999999 999999999999999999999999999973
No 4
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=100.00 E-value=1.9e-61 Score=401.33 Aligned_cols=145 Identities=35% Similarity=0.573 Sum_probs=142.6
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 137 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~ 137 (202)
+|+|+|||||+||+|+|+||+++|++|||+||++|+|+||+|+++.+|+++++++|++|||++|||+||||||+|++|++
T Consensus 11 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~ 90 (170)
T 1xmp_A 11 KSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTNL 90 (170)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHTTCCS
T ss_pred CCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCHHHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhccCC
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 138 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 138 PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~--n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
||||||++++.++|+| ||||||||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 91 PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla~~d~~l~~kl~~~r~~ 158 (170)
T 1xmp_A 91 PVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREA 158 (170)
T ss_dssp CEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 9999999998999999 9999999999999999999 999999999999999999999999999973
No 5
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=100.00 E-value=3.3e-61 Score=401.06 Aligned_cols=146 Identities=30% Similarity=0.515 Sum_probs=142.7
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccC
Q 028883 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQ 136 (202)
Q Consensus 57 ~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~ 136 (202)
.+++|+|||||+||+|+|+||+++|++|||+||++|+|+||+|+++.+|+++++++|++|||++|||+||||||+|++|+
T Consensus 11 m~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~p~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~ 90 (174)
T 3kuu_A 11 AGVKIAIVMGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRTPDRLFSFAEQAEANGLHVIIAGNGGAAHLPGMLAAKTL 90 (174)
T ss_dssp CCCCEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCSEEEEEEESSCCHHHHHHHTCS
T ss_pred CCCcEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhccC
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 137 ILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 137 ~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~--n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
+||||||+++++|+|+| ||||||||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 91 ~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa~~d~~l~~kl~~~r~~ 159 (174)
T 3kuu_A 91 VPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILALHDTELAGRLAHWRQS 159 (174)
T ss_dssp SCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 99999999998999999 9999999999999999999 999999999999999999999999999973
No 6
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=100.00 E-value=6e-61 Score=402.17 Aligned_cols=144 Identities=43% Similarity=0.705 Sum_probs=142.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQIL 138 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~P 138 (202)
|+|+|||||+||+|+|+||+++|++|||+||++|+|+||+|+++.+|+++++++|++|||++|||+||||||+||+|++|
T Consensus 14 ~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~P 93 (183)
T 1o4v_A 14 PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMVASITHLP 93 (183)
T ss_dssp CEEEEEESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSSC
T ss_pred CeEEEEeccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCcccccHHHHHhccCCC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 139 VIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 139 VIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
|||||++++.++|+| ||||||||+|+||+||+|||++|||++|+|||+++|++||+||++||++
T Consensus 94 VIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~Id~~~nAa~lAaqIla~~d~~l~~kL~~~r~~ 158 (183)
T 1o4v_A 94 VIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAINNAKNAGILAASILGIKYPEIARKVKEYKER 158 (183)
T ss_dssp EEEEEECCTTTTTHHHHHHHHTCCTTCCCEECCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred EEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCchHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 999999998999999 9999999999999999999999999999999999999999999999973
No 7
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=100.00 E-value=1.2e-60 Score=397.31 Aligned_cols=149 Identities=38% Similarity=0.594 Sum_probs=144.3
Q ss_pred CCCCCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 54 DSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 54 ~~~~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
.....|+|+|||||+||+|+|+||+++|++|||+||++|+|+||+|+++.+|+++++++|++|||++|||+||||||+|+
T Consensus 8 ~~~~~P~V~IimGS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvvA~ 87 (173)
T 4grd_A 8 HTHSAPLVGVLMGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHRMPDEMFDYAEKARERGLRAIIAGAGGAAHLPGMLAA 87 (173)
T ss_dssp TCCSSCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHHHH
T ss_pred CCCCCCeEEEEeCcHhHHHHHHHHHHHHHHcCCCEEEEEEccccCHHHHHHHHHHHHhcCCeEEEEeccccccchhhhee
Confidence 34456899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 134 NSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 134 ~T~~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~--n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
+|++||||||+++++++|+| ||||||||+|+||+||.|| |++|||++|+|||+++|++||+||++||++
T Consensus 88 ~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa~~d~~l~~kl~~~r~~ 159 (173)
T 4grd_A 88 KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILSGNSVDYANRLAAFRVR 159 (173)
T ss_dssp HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 99999999999999999999 9999999999999999999 999999999999999999999999999973
No 8
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=100.00 E-value=9.5e-61 Score=395.93 Aligned_cols=145 Identities=34% Similarity=0.586 Sum_probs=141.7
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 137 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~ 137 (202)
.|+|+|||||+||+|+|+||+++|++||++||++|+|+||+|+++.+|+++++++|++|||++|||+||||||+||+|++
T Consensus 5 ~p~V~IimgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~t~~ 84 (166)
T 3oow_A 5 SVQVGVIMGSKSDWSTMKECCDILDNLGIGYECEVVSAHRTPDKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAKTTL 84 (166)
T ss_dssp CEEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHHTCSS
T ss_pred CCeEEEEECcHHhHHHHHHHHHHHHHcCCCEEEEEEcCcCCHHHHHHHHHHHHhCCCcEEEEECCcchhhHHHHHhccCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecCC--hhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 138 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNN--AKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 138 PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~n--~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
||||||+++++|+|+| ||||||||+|+||+||+||| ++|||++|+|||+++|++||+||++||++
T Consensus 85 PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~~~d~~l~~kl~~~r~~ 152 (166)
T 3oow_A 85 PVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQHTDINIAKALAEFRAE 152 (166)
T ss_dssp CEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHH
T ss_pred CEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 9999999998999999 99999999999999999995 99999999999999999999999999973
No 9
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=100.00 E-value=1.5e-60 Score=399.00 Aligned_cols=146 Identities=35% Similarity=0.562 Sum_probs=142.0
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccC
Q 028883 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQ 136 (202)
Q Consensus 57 ~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~ 136 (202)
.+|+|+|||||+||||+|++|.++|++|||+||++|+||||+|+++.+|+++++++|++|||++|||+||||||+|++|+
T Consensus 21 mkp~V~IimGS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRtp~~l~~~~~~a~~~g~~ViIa~AG~aahLpGvvAa~T~ 100 (181)
T 4b4k_A 21 MKSLVGVIMGSTSDWETMKYACDILDELNIPYEKKVVSAHRTPDYMFEYAETARERGLKVIIAGAGGAAHLPGMVAAKTN 100 (181)
T ss_dssp -CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSHHHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHTTCC
T ss_pred CCccEEEEECCHhHHHHHHHHHHHHHHcCCCeeEEEEccccChHHHHHHHHHHHhcCceEEEEeccccccchhhHHhcCC
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 137 ILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 137 ~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~--n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
+||||||++++.++|+| ||||||||+|+||+||+|+ +++|||++|+|||+++|++||+||++||++
T Consensus 101 ~PVIGVPv~s~~l~G~DsLlSivQMP~GvpVaTvaig~~ga~NAallA~qILa~~d~~l~~kl~~~r~~ 169 (181)
T 4b4k_A 101 LPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQILGSFHDDIHDALELRREA 169 (181)
T ss_dssp SCEEEEECCCTTTTTHHHHHHHHTCCTTCCCEECCSSHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCCccchhhHHHHHhCCCCCceEEEecCCccHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 99999999998999999 9999999999999999999 779999999999999999999999999973
No 10
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=100.00 E-value=1.8e-60 Score=399.03 Aligned_cols=145 Identities=35% Similarity=0.546 Sum_probs=142.3
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQI 137 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~ 137 (202)
.++|+|||||+||+|+|+||+++|++|||+||++|+|+||+|+++.+|+++++++|++|||++|||+||||||+|++|++
T Consensus 21 ~~~V~IimGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~ 100 (182)
T 1u11_A 21 APVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRL 100 (182)
T ss_dssp CCSEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSS
T ss_pred CCEEEEEECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHHHHhCCCcEEEEecCchhhhHHHHHhccCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecC--ChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 138 LVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN--NAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 138 PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~--n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
||||||++++.++|+| ||||||||+|+||+||+|| |++|||++|+|||+++|++||+||++||++
T Consensus 101 PVIgVP~~~~~l~G~dsLlSivqmP~GvpVatV~I~~a~~~nAallAaqIla~~d~~l~~kL~~~r~~ 168 (182)
T 1u11_A 101 PVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRAL 168 (182)
T ss_dssp CEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHGGGCHHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCCcHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 9999999998999999 9999999999999999999 999999999999999999999999999973
No 11
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=100.00 E-value=1.7e-59 Score=386.30 Aligned_cols=143 Identities=29% Similarity=0.434 Sum_probs=138.9
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhc-CceEEEEecCCcCchhhhhhhccC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAHLSGVAAANSQ 136 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViIa~AG~aa~LpgvvA~~T~ 136 (202)
+|+|+|||||+||+|+|+||+++|++||++||++|+|+||+|+++.+|+++++++ |++|||++|||+||||||+||+|+
T Consensus 2 ~~~V~Iimgs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR~p~~~~~~~~~a~~~~~~~ViIa~AG~aa~LpgvvA~~t~ 81 (159)
T 3rg8_A 2 RPLVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDRPKLYITIAGRSNALSGFVDGFVK 81 (159)
T ss_dssp CCEEEEEESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTTCHHHHHHHHHHHHTSCSCEEEEEECCSSCCHHHHHHHHSS
T ss_pred CCeEEEEECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCCHHHHHHHHHHhhhcCCCcEEEEECCchhhhHHHHHhccC
Confidence 3789999999999999999999999999999999999999999999999999986 799999999999999999999999
Q ss_pred CcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 137 ILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 137 ~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
+||||||+++++++|+|||||||||+|+||+|| ||++|||++|+|||+++|++||+||++||++
T Consensus 82 ~PVIgVP~~~~~l~G~dLlS~vqmp~GvpVatv--~~~~nAa~lA~~Il~~~d~~l~~kl~~~r~~ 145 (159)
T 3rg8_A 82 GATIACPPPSDSFAGADIYSSLRMPSGISPALV--LEPKNAALLAARIFSLYDKEIADSVKSYMES 145 (159)
T ss_dssp SCEEECCCCCCGGGGTHHHHHHCCCTTCCCEEC--CSHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred CCEEEeeCCCCCCCCccHHHHHhCCCCCceEEe--cCchHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 999999999989999999999999999999998 9999999999999999999999999999963
No 12
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=5.7e-59 Score=382.45 Aligned_cols=139 Identities=30% Similarity=0.530 Sum_probs=135.0
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcE
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILV 139 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PV 139 (202)
+|+|||||+||+|+|+||+++|++||++||++|+|+||+|+++.+|++++++ +|||++|||+||||||+|++|++||
T Consensus 1 ~V~Iimgs~SD~~v~~~a~~~l~~~gi~~dv~V~saHR~p~~~~~~~~~a~~---~ViIa~AG~aa~Lpgvva~~t~~PV 77 (157)
T 2ywx_A 1 MICIIMGSESDLKIAEKAVNILKEFGVEFEVRVASAHRTPELVEEIVKNSKA---DVFIAIAGLAAHLPGVVASLTTKPV 77 (157)
T ss_dssp CEEEEESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCHHHHHHHHHHCCC---SEEEEEEESSCCHHHHHHTTCSSCE
T ss_pred CEEEEEccHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCHHHHHHHHHhcCC---CEEEEEcCchhhhHHHHHhccCCCE
Confidence 4899999999999999999999999999999999999999999999998765 9999999999999999999999999
Q ss_pred EEecCCCCCCChhh-HHHhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHhC
Q 028883 140 IRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVEE 202 (202)
Q Consensus 140 IgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~~ 202 (202)
||||+ ++.++|+| ||||||||+|+||+||+|||++|||++|+|||+++|++||+||++||++
T Consensus 78 IgVP~-~~~l~G~daLlS~vqmP~gvpVatV~I~~~~nAa~lA~~Il~~~d~~l~~kl~~~r~~ 140 (157)
T 2ywx_A 78 IAVPV-DAKLDGLDALLSSVQMPPGIPVATVGIDRGENAAILALEILALKDENIAKKLIEYREK 140 (157)
T ss_dssp EEEEE-CSSGGGHHHHHHHHSCCTTSCCEECCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred EEecC-CCccCcHHHHHHHhcCCCCCeeEEEecCCcHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 99999 77899999 9999999999999999999999999999999999999999999999973
No 13
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-54 Score=401.01 Aligned_cols=184 Identities=20% Similarity=0.256 Sum_probs=151.3
Q ss_pred CCCceeeeeecCceeEecCChhhhhhccccCcCCCCCCccccccCCCCCCCCCCeEEEEecCCCCHHHHHHHHHHHHHhC
Q 028883 6 KRPNSVRTVSRGTIPVLASSNGSATSRRKDDSSVREPSTVFEEENPNGDSTDAPIVGIIMESDLDLPVMNDAARTLSDFG 85 (202)
Q Consensus 6 ~~~~~~~~~~~ghi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~IimGS~SD~~v~~~a~~~L~~~g 85 (202)
++++++||++|-..+++.+++++++....++. ..+.....+...++|+|||||+||+|+|+||+.+|++||
T Consensus 222 ~~~~~DK~~~R~~~~~~~~~l~~v~~~Y~eVa---------~rL~i~~~~~~~~~V~Ii~gs~SD~~~~~~a~~~l~~~g 292 (425)
T 2h31_A 222 RSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVA---------ERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFG 292 (425)
T ss_dssp -----------------CCSSSCCCCCHHHHH---------TTGGGGGSCSCCCEEEEEESCGGGHHHHHHHHHHHHHTT
T ss_pred CCCcccHHHHHhccccchhhHHHHHHHHHHHH---------HHhhcccCccCCCeEEEEecCcccHHHHHHHHHHHHHcC
Confidence 47789999999999999998888887777765 221110013344799999999999999999999999999
Q ss_pred CCeEEEEEccCCCchHHHHHHHHHhhcCc-eEEEEecCCcCchhhhhhhccCCcEEEecCCCCCCChhh-HHHhhcCCCC
Q 028883 86 VPYEIKILPPHQNCKEALSYALSAKERGI-KIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSH 163 (202)
Q Consensus 86 i~~ev~V~SaHRtp~~l~~~~~~~~~~g~-~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~~~~l~G~D-LlS~vqMP~G 163 (202)
++||++|+||||+|+++.+|+++++++|+ +||||+|||+||||||+||+|++||||||++ ..++|+| ||||||||+|
T Consensus 293 i~~~v~V~saHR~p~~~~~~~~~~~~~g~~~viIa~AG~~a~Lpgvva~~t~~PVIgvP~~-~~~~G~daLls~vqmp~g 371 (425)
T 2h31_A 293 IPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPL-TPDWGVQDVWSSLRLPSG 371 (425)
T ss_dssp CCEEEEECCTTTCHHHHHHHHHHHHTTCCCEEEEEECCSSCCHHHHHHHHCSSCEEECCCC-CTTTHHHHGGGTSSCCSS
T ss_pred CceEEeeeeccCCHHHHHHHHHHHHHCCCCeEEEEEcCcccchHhHHhccCCCCEEEeeCc-cccccHHHHHHHhcCCCC
Confidence 99999999999999999999999999999 6999999999999999999999999999997 5699999 9999999999
Q ss_pred CeeeEEecCChhhHHHHHHHHHccCCHHHHHHHHHHHh
Q 028883 164 VQVASVPRNNAKNAALYAVKVLGIADEDLLERIRKYVE 201 (202)
Q Consensus 164 vpVatV~I~n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~ 201 (202)
+||+||+ |++|||++|+|||+++|++||+||++||+
T Consensus 372 ~pvatv~--~~~nAa~~A~~Il~~~~~~l~~kl~~~~~ 407 (425)
T 2h31_A 372 LGCSTVL--SPEGSAQFAAQIFGLSNHLVWSKLRASIL 407 (425)
T ss_dssp CCCEECC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred CceEEec--CchHHHHHHHHHHccCCHHHHHHHHHHHH
Confidence 9999995 89999999999999999999999999996
No 14
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=97.39 E-value=0.0003 Score=63.53 Aligned_cols=88 Identities=11% Similarity=0.123 Sum_probs=71.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC-chhhhhhhccCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANSQI 137 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa-~LpgvvA~~T~~ 137 (202)
.++.||++...-....++..+.|++ |+.+.+.....+-+.+.+.+..+.+.+.++++||++-|++. -++..+|....+
T Consensus 53 ~r~liVtd~~~~~~~~~~v~~~L~~-g~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGs~~D~AK~iA~~~~~ 131 (387)
T 3uhj_A 53 KRALVLIDRVLFDALSERIGKSCGD-SLDIRFERFGGECCTSEIERVRKVAIEHGSDILVGVGGGKTADTAKIVAIDTGA 131 (387)
T ss_dssp SEEEEEECTTTHHHHHHHC-------CCEEEEEECCSSCSHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHTTC
T ss_pred CEEEEEECchHHHHHHHHHHHHHHc-CCCeEEEEcCCCCCHHHHHHHHHHHhhcCCCEEEEeCCcHHHHHHHHHHHhcCC
Confidence 5899999998876788899999999 99886566778888899999999998888999999999964 589999999999
Q ss_pred cEEEecCCCC
Q 028883 138 LVIRVPLLSE 147 (202)
Q Consensus 138 PVIgVP~~~~ 147 (202)
|+|.||+..+
T Consensus 132 p~i~IPTTag 141 (387)
T 3uhj_A 132 RIVIAPTIAS 141 (387)
T ss_dssp EEEECCSSCC
T ss_pred CEEEecCccc
Confidence 9999999743
No 15
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=97.28 E-value=0.00034 Score=61.82 Aligned_cols=88 Identities=14% Similarity=0.060 Sum_probs=73.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCc-CchhhhhhhccCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAANSQI 137 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a-a~LpgvvA~~T~~ 137 (202)
.+|.||++..+.....++..+.|++-|+++.+.+.+-+-+.+.+.+..+.+.+.++++||++-|++ .-+++.+|....+
T Consensus 32 ~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~ge~~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~~~ 111 (370)
T 1jq5_A 32 NKTVVIADEIVWKIAGHTIVNELKKGNIAAEEVVFSGEASRNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVADELDA 111 (370)
T ss_dssp SEEEEEECHHHHHHTHHHHHHHHHTTTCEEEEEECCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEChHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHHhcCC
Confidence 589999988776667888999999999987655555666667888888888888899999998874 6699999999999
Q ss_pred cEEEecCCC
Q 028883 138 LVIRVPLLS 146 (202)
Q Consensus 138 PVIgVP~~~ 146 (202)
|+|.||+..
T Consensus 112 p~i~IPTTa 120 (370)
T 1jq5_A 112 YIVIVPTAA 120 (370)
T ss_dssp EEEEEESSC
T ss_pred CEEEecccc
Confidence 999999974
No 16
>3ce9_A Glycerol dehydrogenase; NP_348253.1, 3-dehydroquinate syntha structural genomics, joint center for structural genomics; HET: MSE; 2.37A {Clostridium acetobutylicum atcc 824}
Probab=97.04 E-value=0.0011 Score=58.23 Aligned_cols=88 Identities=10% Similarity=0.004 Sum_probs=73.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCC-cCchhhhhhhccCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAANSQI 137 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~-aa~LpgvvA~~T~~ 137 (202)
.++.||++........++..+.|++-|+++.+..-..+-+.+.+.+. +.+.+.++++||++-|+ ..-+++.+|....+
T Consensus 35 ~~~livtd~~~~~~~~~~v~~~L~~~g~~~~~~~~~~~~~~~~v~~~-~~~~~~~~d~IIavGGGsv~D~aK~vA~~~~~ 113 (354)
T 3ce9_A 35 KRVSLYFGEGIYELFGETIEKSIKSSNIEIEAVETVKNIDFDEIGTN-AFKIPAEVDALIGIGGGKAIDAVKYMAFLRKL 113 (354)
T ss_dssp SEEEEEEETTHHHHHHHHHHHHHHTTTCEEEEEEEECCCBHHHHHHH-HTTSCTTCCEEEEEESHHHHHHHHHHHHHHTC
T ss_pred CeEEEEECccHHHHHHHHHHHHHHHcCCeEEEEecCCCCCHHHHHHH-HHhhhcCCCEEEEECChHHHHHHHHHHhhcCC
Confidence 38999999887767889999999999998765442466788888888 87877788999999887 45699999999999
Q ss_pred cEEEecCCCC
Q 028883 138 LVIRVPLLSE 147 (202)
Q Consensus 138 PVIgVP~~~~ 147 (202)
|+|.||+..+
T Consensus 114 p~i~IPTT~~ 123 (354)
T 3ce9_A 114 PFISVPTSTS 123 (354)
T ss_dssp CEEEEESCCS
T ss_pred CEEEecCccc
Confidence 9999999764
No 17
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=97.00 E-value=0.0016 Score=57.97 Aligned_cols=89 Identities=10% Similarity=0.073 Sum_probs=71.9
Q ss_pred CeEEEEecCCCCHH---HHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHHhhcCceEEEEecCCc-Cchhhhhhh
Q 028883 59 PIVGIIMESDLDLP---VMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAA 133 (202)
Q Consensus 59 ~~V~IimGS~SD~~---v~~~a~~~L~~~gi~~ev-~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a-a~LpgvvA~ 133 (202)
.+|.||++...-.. ..++..+.|++-|+.+.+ .-...+.+.+.+.+.++.+.+.++++||++-|++ --+++.+|.
T Consensus 34 ~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~ 113 (387)
T 3bfj_A 34 KKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIGI 113 (387)
T ss_dssp SEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHH
T ss_pred CEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHH
Confidence 48999998877655 899999999999987632 2235788999999999999999999999998874 558888887
Q ss_pred c------------------cCCcEEEecCCCC
Q 028883 134 N------------------SQILVIRVPLLSE 147 (202)
Q Consensus 134 ~------------------T~~PVIgVP~~~~ 147 (202)
. ..+|+|.||+..+
T Consensus 114 ~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~g 145 (387)
T 3bfj_A 114 AATHEGDLYQYAGIETLTNPLPPIVAVNTTAG 145 (387)
T ss_dssp HHHSSSCSGGGCBSSCCCSCCCCEEEEECSTT
T ss_pred HHhCCCCHHHHhcccccCCCCCCEEEEeCCCC
Confidence 5 5789999999753
No 18
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=96.96 E-value=0.0028 Score=56.36 Aligned_cols=89 Identities=10% Similarity=0.166 Sum_probs=72.0
Q ss_pred CeEEEEecCCCCH--HHHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHHhhcCceEEEEecCCc-Cchhhhhhhc
Q 028883 59 PIVGIIMESDLDL--PVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAAN 134 (202)
Q Consensus 59 ~~V~IimGS~SD~--~v~~~a~~~L~~~gi~~ev-~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a-a~LpgvvA~~ 134 (202)
.++.||++..+-. ...++..+.|++-|+.+.+ .=...+.+.+.+.+..+.+.+.++++||++-|++ --+++++|..
T Consensus 41 ~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~AK~iA~~ 120 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRNDSFDFVVGLGGGSPMDFAKAVAVL 120 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTSCCSEEEEEESHHHHHHHHHHHHH
T ss_pred CEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHHH
Confidence 4899999885533 3789999999999987643 2245889999999999999888899999998874 5588888886
Q ss_pred ------------------cCCcEEEecCCCC
Q 028883 135 ------------------SQILVIRVPLLSE 147 (202)
Q Consensus 135 ------------------T~~PVIgVP~~~~ 147 (202)
..+|+|.||+..+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~p~i~IPTTag 151 (371)
T 1o2d_A 121 LKEKDLSVEDLYDREKVKHWLPVVEIPTTAG 151 (371)
T ss_dssp TTSTTCCSGGGGCGGGCCCCCCEEEEECSSC
T ss_pred HhCCCCCHHHHhcccCCCCCCeEEEEeCCCc
Confidence 5789999999854
No 19
>1ta9_A Glycerol dehydrogenase; oxidoredu; 1.90A {Schizosaccharomyces pombe}
Probab=96.82 E-value=0.0013 Score=60.61 Aligned_cols=86 Identities=13% Similarity=0.082 Sum_probs=72.0
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCc-CchhhhhhhccCCc
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAANSQIL 138 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a-a~LpgvvA~~T~~P 138 (202)
+|.||++..+.....++..+.|++-|+.+.+.+.+-+-+-+.+.+..+.+.+ ++++||++.|++ .-+++.+|....+|
T Consensus 93 rvlIVtd~~~~~~~~~~v~~~L~~~gi~~~~~~~~ge~~~~~v~~~~~~~~~-~~D~IIAvGGGSviD~AK~iA~~~giP 171 (450)
T 1ta9_A 93 SAVVLADQNVWNICANKIVDSLSQNGMTVTKLVFGGEASLVELDKLRKQCPD-DTQVIIGVGGGKTMDSAKYIAHSMNLP 171 (450)
T ss_dssp EEEEEEEHHHHHHTHHHHHHHHHHTTCEEEEEEECSCCCHHHHHHHHTTSCT-TCCEEEEEESHHHHHHHHHHHHHTTCC
T ss_pred EEEEEECccHHHHHHHHHHHHHHHCCCeEEEEeeCCCCCHHHHHHHHHHHhh-CCCEEEEeCCcHHHHHHHHHHHhcCCC
Confidence 8999998877666788999999999998765566666666778888877777 899999998874 56999999999999
Q ss_pred EEEecCCC
Q 028883 139 VIRVPLLS 146 (202)
Q Consensus 139 VIgVP~~~ 146 (202)
+|.||+..
T Consensus 172 ~I~IPTTA 179 (450)
T 1ta9_A 172 SIICPTTA 179 (450)
T ss_dssp EEEEESSC
T ss_pred EEEEeCCC
Confidence 99999974
No 20
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=96.80 E-value=0.0017 Score=58.10 Aligned_cols=89 Identities=12% Similarity=0.116 Sum_probs=71.6
Q ss_pred CeEEEEecCCCCH-HHHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC-chhhhhhhcc
Q 028883 59 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANS 135 (202)
Q Consensus 59 ~~V~IimGS~SD~-~v~~~a~~~L~~~gi~~ev-~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa-~LpgvvA~~T 135 (202)
.+|.||++....- ...++..+.|++-|+.+.+ .-...+.+.+.+.+.++.+.+.++++||++-|++. -++..+|...
T Consensus 32 ~~~liVtd~~~~~~g~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv~D~aK~ia~~~ 111 (383)
T 3ox4_A 32 KNALIVSDAFMNKSGVVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGLKILKDNNSDFVISLGGGSPHDCAKAIALVA 111 (383)
T ss_dssp CEEEEEEEHHHHHTTHHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHH
T ss_pred CEEEEEECCchhhCchHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCCcHHHHHHHHHHHHH
Confidence 4799999864322 2578888999999998743 34568999999999999998889999999999964 4788888766
Q ss_pred ------------------CCcEEEecCCCC
Q 028883 136 ------------------QILVIRVPLLSE 147 (202)
Q Consensus 136 ------------------~~PVIgVP~~~~ 147 (202)
.+|+|.||+..+
T Consensus 112 ~~~~~~~d~~~~~~~~~~~~p~i~IPTTag 141 (383)
T 3ox4_A 112 TNGGEVKDYEGIDKSKKPALPLMSINTTAG 141 (383)
T ss_dssp HSCSSGGGGCEESCCSSCCSCEEEEECSSS
T ss_pred hCCCCHHHHhcccccccCCCCEEEEeCCCC
Confidence 899999999753
No 21
>3okf_A 3-dehydroquinate synthase; structural genomics, center for structural genomics of infec diseases, csgid, NAD, lyase; HET: NAD; 2.50A {Vibrio cholerae o1 biovar eltor}
Probab=96.76 E-value=0.0049 Score=56.15 Aligned_cols=88 Identities=18% Similarity=0.151 Sum_probs=74.7
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHHhhcCc---eEEEEecCC-cCchhhh
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGV 130 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S---aHRtp~~l~~~~~~~~~~g~---~ViIa~AG~-aa~Lpgv 130 (202)
..+|.||++....--+.++..+.|++.|+++++.+.. .+++.+.+.+..+.+.+.++ ++||++.|+ ..-++++
T Consensus 62 ~~rvlIVtd~~v~~~~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~R~d~IIAvGGGsv~D~ak~ 141 (390)
T 3okf_A 62 KQKVVIVTNHTVAPLYAPAIISLLDHIGCQHALLELPDGEQYKTLETFNTVMSFLLEHNYSRDVVVIALGGGVIGDLVGF 141 (390)
T ss_dssp TCEEEEEEETTTHHHHHHHHHHHHHHHTCEEEEEEECSSGGGCBHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHH
T ss_pred CCEEEEEECCcHHHHHHHHHHHHHHHcCCeEEEEEECCCcCCchHHHHHHHHHHHHhcCCCcCcEEEEECCcHHhhHHHH
Confidence 3589999999988779999999999999988866554 57889999999998888777 699998888 5568999
Q ss_pred hhh--ccCCcEEEecCC
Q 028883 131 AAA--NSQILVIRVPLL 145 (202)
Q Consensus 131 vA~--~T~~PVIgVP~~ 145 (202)
+|+ +...|+|.||+.
T Consensus 142 ~Aa~~~rgip~I~IPTT 158 (390)
T 3okf_A 142 AAACYQRGVDFIQIPTT 158 (390)
T ss_dssp HHHHBTTCCEEEEEECS
T ss_pred HHHHhcCCCCEEEeCCC
Confidence 984 578999999997
No 22
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=96.70 E-value=0.0036 Score=56.24 Aligned_cols=87 Identities=11% Similarity=0.121 Sum_probs=71.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHh------CCCeEEEEEcc---CCCchHHHHHHHHHhhcC--c---eEEEEecCC-
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDF------GVPYEIKILPP---HQNCKEALSYALSAKERG--I---KIIIVGDGV- 123 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~------gi~~ev~V~Sa---HRtp~~l~~~~~~~~~~g--~---~ViIa~AG~- 123 (202)
.++.||++.....-+.++..+.|++. |+.+...+... +++.+.+.+..+.+.+.+ + ++||++-|+
T Consensus 37 ~k~liVtd~~v~~~~~~~v~~~L~~~~~~~~~g~~~~~~~~~~gE~~k~~~~v~~~~~~~~~~~~~~~r~d~iIalGGGs 116 (393)
T 1sg6_A 37 TTYVLVTDTNIGSIYTPSFEEAFRKRAAEITPSPRLLIYNRPPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGV 116 (393)
T ss_dssp SEEEEEEEHHHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEECSSGGGSSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHH
T ss_pred CeEEEEECCcHHHHHHHHHHHHHHhhhccccCCceeEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCCCCEEEEECCcH
Confidence 47999998765544788888888877 77766555555 888999999999998888 8 999999887
Q ss_pred cCchhhhhhh--ccCCcEEEecCC
Q 028883 124 EAHLSGVAAA--NSQILVIRVPLL 145 (202)
Q Consensus 124 aa~LpgvvA~--~T~~PVIgVP~~ 145 (202)
..-+++++|+ +..+|+|.||+.
T Consensus 117 v~D~ak~~Aa~~~rgip~i~IPTT 140 (393)
T 1sg6_A 117 IGDLTGFVASTYMRGVRYVQVPTT 140 (393)
T ss_dssp HHHHHHHHHHHGGGCCEEEEEECS
T ss_pred HHHHHHHHHHHhcCCCCEEEECCc
Confidence 5679999995 578999999995
No 23
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=96.69 E-value=0.0016 Score=58.02 Aligned_cols=86 Identities=10% Similarity=0.051 Sum_probs=67.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCc-hhhhhhhccCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH-LSGVAAANSQI 137 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~-LpgvvA~~T~~ 137 (202)
.+|.||++... ....++..+.|++.++.+ +.-...+.+.+.+.+.++.+.+.++++||++-|++.. ++..+|....+
T Consensus 35 ~r~liVtd~~~-~~~~~~v~~~L~~~~~~v-~~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~iA~~~~~ 112 (353)
T 3hl0_A 35 SRALVLSTPQQ-KGDAEALASRLGRLAAGV-FSEAAMHTPVEVTKTAVEAYRAAGADCVVSLGGGSTTGLGKAIALRTDA 112 (353)
T ss_dssp CCEEEECCGGG-HHHHHHHHHHHGGGEEEE-ECCCCTTCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHHCC
T ss_pred CEEEEEecCch-hhHHHHHHHHHhhCCcEE-ecCcCCCCcHHHHHHHHHHHhccCCCEEEEeCCcHHHHHHHHHHhccCC
Confidence 47999998764 567888888888754321 1112356777889999988888899999999999654 89999999999
Q ss_pred cEEEecCCC
Q 028883 138 LVIRVPLLS 146 (202)
Q Consensus 138 PVIgVP~~~ 146 (202)
|+|.||+..
T Consensus 113 p~i~IPTTa 121 (353)
T 3hl0_A 113 AQIVIPTTY 121 (353)
T ss_dssp EEEEEECSS
T ss_pred CEEEEeCCc
Confidence 999999975
No 24
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=96.64 E-value=0.0021 Score=57.08 Aligned_cols=88 Identities=13% Similarity=0.142 Sum_probs=70.2
Q ss_pred CeEEEEecCCCCH-HHHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHHhhcCceEEEEecCCc-Cchhhhhhhcc
Q 028883 59 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAAANS 135 (202)
Q Consensus 59 ~~V~IimGS~SD~-~v~~~a~~~L~~~gi~~ev-~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a-a~LpgvvA~~T 135 (202)
.+|.||++..... ...++..+.|++-|+.+.+ .-...+.+.+.+.+.++.+.+.++++||++-|++ --+++++|...
T Consensus 32 ~~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA~~~ 111 (386)
T 1rrm_A 32 QKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIIS 111 (386)
T ss_dssp CEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHH
T ss_pred CEEEEEECcchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCEEEEeCChHHHHHHHHHHHHH
Confidence 4799999865532 3788899999998987642 2245788899999999999888999999998874 45888888755
Q ss_pred --------------------CCcEEEecCCC
Q 028883 136 --------------------QILVIRVPLLS 146 (202)
Q Consensus 136 --------------------~~PVIgVP~~~ 146 (202)
.+|+|.||+..
T Consensus 112 ~~~~~~~~~d~~~~~~~~~~~~p~i~IPTT~ 142 (386)
T 1rrm_A 112 NNPEFADVRSLEGLSPTNKPSVPILAIPTTA 142 (386)
T ss_dssp HCGGGTTSGGGSEECCCCSCCSCEEEEECSS
T ss_pred hCCCCCCHHHHhcccccCCCCCCEEEEeCCC
Confidence 78999999975
No 25
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=96.50 E-value=0.0026 Score=56.79 Aligned_cols=86 Identities=13% Similarity=0.084 Sum_probs=66.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC-chhhhhhhccCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HLSGVAAANSQI 137 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa-~LpgvvA~~T~~ 137 (202)
.+|.||++... ....++..+.|++.++. .+.-...|.+.+.+.+.++.+.+.++++||++-|++. -++..+|....+
T Consensus 37 ~r~liVtd~~~-~~~~~~v~~~L~~~~~~-~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~aK~iA~~~~~ 114 (358)
T 3jzd_A 37 KRALVLCTPNQ-QAEAERIADLLGPLSAG-VYAGAVMHVPIESARDATARAREAGADCAVAVGGGSTTGLGKAIALETGM 114 (358)
T ss_dssp SCEEEECCGGG-HHHHHHHHHHHGGGEEE-EECCCCTTCBHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHCC
T ss_pred CeEEEEeCCcH-HHHHHHHHHHhccCCEE-EecCCcCCCCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHHhccCC
Confidence 37999998865 56677888888765321 1112335677888888888888888999999999965 489999999999
Q ss_pred cEEEecCCC
Q 028883 138 LVIRVPLLS 146 (202)
Q Consensus 138 PVIgVP~~~ 146 (202)
|+|.||+..
T Consensus 115 p~i~IPTT~ 123 (358)
T 3jzd_A 115 PIVAIPTTY 123 (358)
T ss_dssp CEEEEECSS
T ss_pred CEEEEeCCc
Confidence 999999975
No 26
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=96.47 E-value=0.0094 Score=53.56 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=69.1
Q ss_pred CeEEEEecCCCCH--HHHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHHhhcCceEEEEecCCc-Cchhhhhh
Q 028883 59 PIVGIIMESDLDL--PVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAA 132 (202)
Q Consensus 59 ~~V~IimGS~SD~--~v~~~a~~~L~~~gi~~ev~V~S---aHRtp~~l~~~~~~~~~~g~~ViIa~AG~a-a~LpgvvA 132 (202)
.+|.||++..+=. ...++..+.|++-|+.+. +.+ .+.+.+.+.+.++.+.+.++++||++-|++ --++..+|
T Consensus 44 ~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~--~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~AK~iA 121 (407)
T 1vlj_A 44 RKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWV--EVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVA 121 (407)
T ss_dssp CEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEE--EECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHH
T ss_pred CeEEEEECchHHhhccHHHHHHHHHHHcCCeEE--EecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCChhHHHHHHHHH
Confidence 4899999854322 378999999999898764 333 478889999999999888999999998875 45888888
Q ss_pred hc------------------cCCcEEEecCCCC
Q 028883 133 AN------------------SQILVIRVPLLSE 147 (202)
Q Consensus 133 ~~------------------T~~PVIgVP~~~~ 147 (202)
.. ..+|+|.||+..+
T Consensus 122 ~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTag 154 (407)
T 1vlj_A 122 AGALYEGDIWDAFIGKYQIEKALPIFDVLTISA 154 (407)
T ss_dssp HHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCS
T ss_pred HHHhCCCCHHHHhcccccCCCCCCEEEEeCCCC
Confidence 75 4789999999753
No 27
>2gru_A 2-deoxy-scyllo-inosose synthase; aminoglycoside, 2-deoxystreptamine, dehydroquinate synthase, lyase; HET: NAD EXO CAK; 2.15A {Bacillus circulans} PDB: 2d2x_A*
Probab=96.12 E-value=0.024 Score=50.35 Aligned_cols=86 Identities=21% Similarity=0.216 Sum_probs=69.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHHhhcC---ceEEEEecCC-cCchhhhh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERG---IKIIIVGDGV-EAHLSGVA 131 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S---aHRtp~~l~~~~~~~~~~g---~~ViIa~AG~-aa~Lpgvv 131 (202)
.+|.||++....-.+.++..+.|++- +.++..+.. .|++.+.+.+..+.+.+.+ .++||++-|+ ..-+++++
T Consensus 35 ~k~liVtd~~v~~~~~~~v~~~L~~~-~~~~~~~~~~ge~~k~~~~v~~~~~~~~~~~~~r~d~iIalGGGsv~D~ak~~ 113 (368)
T 2gru_A 35 DQYIMISDSGVPDSIVHYAAEYFGKL-APVHILRFQGGEEYKTLSTVTNLQERAIALGANRRTAIVAVGGGLTGNVAGVA 113 (368)
T ss_dssp SEEEEEEETTSCHHHHHHHHHHHTTT-SCEEEEEECCSGGGCSHHHHHHHHHHHHHTTCCTTEEEEEEESHHHHHHHHHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhc-cceeEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCcEEEEECChHHHHHHHHH
Confidence 58999999988877888888888776 666655543 6788888988888877766 5999998876 66799999
Q ss_pred hh--ccCCcEEEecCC
Q 028883 132 AA--NSQILVIRVPLL 145 (202)
Q Consensus 132 A~--~T~~PVIgVP~~ 145 (202)
|+ +...|+|.||+.
T Consensus 114 Aa~~~rgip~i~IPTT 129 (368)
T 2gru_A 114 AGMMFRGIALIHVPTT 129 (368)
T ss_dssp HHHBTTCCEEEEEECS
T ss_pred HHHhcCCCCEEEECCc
Confidence 96 457999999994
No 28
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=95.99 E-value=0.011 Score=52.93 Aligned_cols=85 Identities=16% Similarity=0.122 Sum_probs=65.0
Q ss_pred CeEEEEecCCCCHH--HHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHHhhcCceEEEEecCCc-Cchhhhhh
Q 028883 59 PIVGIIMESDLDLP--VMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAA 132 (202)
Q Consensus 59 ~~V~IimGS~SD~~--v~~~a~~~L~~~gi~~ev~V~S---aHRtp~~l~~~~~~~~~~g~~ViIa~AG~a-a~LpgvvA 132 (202)
.+|.||++..+-.. ..++..+.|+ |+++ .+.+ .+.+.+.+.+.++.+.+.++++||++-|++ --+++.+|
T Consensus 51 ~r~liVtd~~~~~~~g~~~~v~~~L~--g~~~--~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsviD~AK~iA 126 (408)
T 1oj7_A 51 ARVLITYGGGSVKKTGVLDQVLDALK--GMDV--LEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIA 126 (408)
T ss_dssp CEEEEEECSSHHHHHSHHHHHHHHTT--TSEE--EEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHHHHHHHHHH
T ss_pred CEEEEEECCchhhhccHHHHHHHHhC--CCEE--EEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHH
Confidence 58999998764333 6777777776 7654 3433 578889999999999888999999998874 45888888
Q ss_pred hc---------------------cCCcEEEecCCCC
Q 028883 133 AN---------------------SQILVIRVPLLSE 147 (202)
Q Consensus 133 ~~---------------------T~~PVIgVP~~~~ 147 (202)
.. ..+|+|.||+..+
T Consensus 127 ~~~~~~~~~~~~d~~~~~~~~~~~~~p~i~IPTTag 162 (408)
T 1oj7_A 127 AAANYPENIDPWHILQTGGKEIKSAIPMGCVLTLPA 162 (408)
T ss_dssp HHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESSCS
T ss_pred HHHhCCCCCCHHHHhccccCcCCCCCCEEEEeCCCc
Confidence 74 4589999999753
No 29
>3qbe_A 3-dehydroquinate synthase; shikimate pathway, mycobacte tuberculosis, nicotinamide adenine dinucleotide (NAD)-depen enzyme; 2.07A {Mycobacterium tuberculosis} PDB: 3qbd_A
Probab=95.94 E-value=0.018 Score=51.97 Aligned_cols=86 Identities=15% Similarity=0.160 Sum_probs=69.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHHhhcC---ceEEEEecCC-cCchhhhh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERG---IKIIIVGDGV-EAHLSGVA 131 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S---aHRtp~~l~~~~~~~~~~g---~~ViIa~AG~-aa~Lpgvv 131 (202)
.+|.||++..... ..++..+.|++-|+++++.+.. .+++.+.+.+..+.+.+.+ .++||++.|+ ..-+++++
T Consensus 44 ~rvlIVtd~~v~~-~~~~v~~~L~~~g~~~~~~~~~~gE~~kt~~~v~~~~~~l~~~~~~r~d~IIavGGGsv~D~ak~~ 122 (368)
T 3qbe_A 44 HKVAVVHQPGLAE-TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFA 122 (368)
T ss_dssp SEEEEEECGGGHH-HHHHHHHHHHHTTCEEEEEECCSGGGGGBHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHH
T ss_pred CEEEEEECccHHH-HHHHHHHHHHhcCCcceEEEeCCCCCCCCHHHHHHHHHHHHHcCCCCCcEEEEECChHHHHHHHHH
Confidence 5899999998754 5888999999999987766553 5778888888888776654 4899999888 45689999
Q ss_pred hh--ccCCcEEEecCC
Q 028883 132 AA--NSQILVIRVPLL 145 (202)
Q Consensus 132 A~--~T~~PVIgVP~~ 145 (202)
|+ +...|+|.||+.
T Consensus 123 Aa~~~rgip~i~IPTT 138 (368)
T 3qbe_A 123 AATWLRGVSIVHLPTT 138 (368)
T ss_dssp HHHGGGCCEEEEEECS
T ss_pred HHHhccCCcEEEECCC
Confidence 94 478999999996
No 30
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=95.91 E-value=0.16 Score=42.78 Aligned_cols=128 Identities=14% Similarity=0.106 Sum_probs=85.2
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhh-cCceEEEEecCCcCchhhhhhhccCCc
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSGVAAANSQIL 138 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~-~g~~ViIa~AG~aa~LpgvvA~~T~~P 138 (202)
.+.++.+.. ...+.+.+++.+++...++.+.. ...++..+.+++... .|++|||+-.|.+. .+-.+++.|
T Consensus 14 ~ii~i~~~~---~L~~~~~~i~~e~~~~~~I~vi~--~~le~av~~a~~~~~~~~~dVIISRGgta~----~Lr~~~~iP 84 (225)
T 2pju_A 14 PVIWTVSVT---RLFELFRDISLEFDHLANITPIQ--LGFEKAVTYIRKKLANERCDAIIAAGSNGA----YLKSRLSVP 84 (225)
T ss_dssp CEEEEECCH---HHHHHHHHHHTTTTTTCEEEEEC--CCHHHHHHHHHHHTTTSCCSEEEEEHHHHH----HHHTTCSSC
T ss_pred CEEEEEchH---HHHHHHHHHHHhhCCCceEEEec--CcHHHHHHHHHHHHhcCCCeEEEeCChHHH----HHHhhCCCC
Confidence 455555433 23335666677888777877754 235666666666544 46999998766555 445667899
Q ss_pred EEEecCCCCCCChhhHHHhhcCCCCC--eeeEEecCChhhHHHHHHHHHccC--------CHHHHHHHHHHHh
Q 028883 139 VIRVPLLSEDWSEDDVINSIRMPSHV--QVASVPRNNAKNAALYAVKVLGIA--------DEDLLERIRKYVE 201 (202)
Q Consensus 139 VIgVP~~~~~l~G~DLlS~vqMP~Gv--pVatV~I~n~~NAAl~Aa~IL~~~--------d~~l~~kl~~~~~ 201 (202)
||-+|++ |.|++..|+..... .+++|+-.|..+.+-.-.++|++. .+++.+.+++.++
T Consensus 85 VV~I~vs-----~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~i~~l~~ 152 (225)
T 2pju_A 85 VILIKPS-----GYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYITEEDARGQINELKA 152 (225)
T ss_dssp EEEECCC-----HHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHHHH
T ss_pred EEEecCC-----HHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH
Confidence 9999864 57744444432222 589998889888888888899864 4577777776654
No 31
>1xah_A Sadhqs, 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, open form, form B, domain movement, cyclase; HET: NAD; 2.20A {Staphylococcus aureus} PDB: 1xag_A* 1xai_A* 1xaj_A* 1xal_A*
Probab=95.69 E-value=0.012 Score=51.76 Aligned_cols=86 Identities=15% Similarity=0.158 Sum_probs=63.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHHhhcCc---eEEEEecCC-cCchhhhh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVA 131 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S---aHRtp~~l~~~~~~~~~~g~---~ViIa~AG~-aa~Lpgvv 131 (202)
.+|.||++....-...++..+.| +-| .+++.+.. .+.+.+.+.+..+.+.+.++ ++||++-|+ ..-+++++
T Consensus 32 ~~~liVtd~~~~~~~~~~v~~~L-~~g-~~~~~~~~~~e~~p~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~D~ak~v 109 (354)
T 1xah_A 32 DQSFLLIDEYVNQYFANKFDDIL-SYE-NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFV 109 (354)
T ss_dssp SCEEEEEEHHHHHHHHHHHC--------CEEEEEECSGGGGCSHHHHHHHHHHHHTTCCCTTCEEEEEESHHHHHHHHHH
T ss_pred CeEEEEECCcHHHHHHHHHHHHH-hcC-CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCCCCceEEEECChHHHHHHHHH
Confidence 47999987654444667777777 667 66655553 57899999999999988888 899999887 55699999
Q ss_pred hh--ccCCcEEEecCCC
Q 028883 132 AA--NSQILVIRVPLLS 146 (202)
Q Consensus 132 A~--~T~~PVIgVP~~~ 146 (202)
|+ ...+|+|.||+..
T Consensus 110 A~~~~rgip~i~IPTT~ 126 (354)
T 1xah_A 110 AATLLRGVHFIQVPTTI 126 (354)
T ss_dssp HHHBTTCCEEEEEECST
T ss_pred HHHhccCCCEEEECCcc
Confidence 95 5789999999974
No 32
>3iv7_A Alcohol dehydrogenase IV; NP_602249.1, iron-containing alcohol dehydrogenase, structur genomics, joint center for structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=95.58 E-value=0.013 Score=52.53 Aligned_cols=84 Identities=15% Similarity=0.159 Sum_probs=63.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCc-hhhhhhhccCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH-LSGVAAANSQI 137 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~-LpgvvA~~T~~ 137 (202)
.+|.||++... ....++.. +.++-...+.-...|.+.+.+.+.++.+.+.++++||++-|++.. ++..+|....+
T Consensus 38 ~rvliVtd~~~-~~~~~~v~---~~L~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~iA~~~~~ 113 (364)
T 3iv7_A 38 AKVMVIAGERE-MSIAHKVA---SEIEVAIWHDEVVMHVPIEVAERARAVATDNEIDLLVCVGGGSTIGLAKAIAMTTAL 113 (364)
T ss_dssp SSEEEECCGGG-HHHHHHHT---TTSCCSEEECCCCTTCBHHHHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHHHHHCC
T ss_pred CEEEEEECCCH-HHHHHHHH---HHcCCCEEEcceecCCCHHHHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHhccCC
Confidence 36999998864 34444433 344422333334568888999999999988899999999999654 88999999999
Q ss_pred cEEEecCCC
Q 028883 138 LVIRVPLLS 146 (202)
Q Consensus 138 PVIgVP~~~ 146 (202)
|+|.||+..
T Consensus 114 P~i~IPTTa 122 (364)
T 3iv7_A 114 PIVAIPTTY 122 (364)
T ss_dssp CEEEEECSS
T ss_pred CEEEEcCCc
Confidence 999999975
No 33
>1ujn_A Dehydroquinate synthase; riken structu genomics/proteomics initiative, RSGI, structural genomics,; 1.80A {Thermus thermophilus} SCOP: e.22.1.1
Probab=95.40 E-value=0.017 Score=51.06 Aligned_cols=82 Identities=15% Similarity=0.148 Sum_probs=64.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEE---ccCCCchHHHHHHHHHhhcCc---eEEEEecCC-cCchhhhh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL---PPHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVA 131 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~---SaHRtp~~l~~~~~~~~~~g~---~ViIa~AG~-aa~Lpgvv 131 (202)
.+|.||++..... +.++..+.|+ +++ + .+. -.+++.+.+.+..+.+.+.++ ++||++-|+ ..-+++++
T Consensus 29 ~kvliVtd~~v~~-~~~~v~~~L~-~~~--~-~~~~~ge~~~~~~~v~~~~~~~~~~~~~r~d~IIavGGGsv~D~ak~~ 103 (348)
T 1ujn_A 29 GPAALLFDRRVEG-FAQEVAKALG-VRH--L-LGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFV 103 (348)
T ss_dssp SCEEEEEEGGGHH-HHHHHHHHHT-CCC--E-EEECCSGGGSSHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHH
T ss_pred CEEEEEECCcHHH-HHHHHHHHhc-cCe--E-EEECCCCCCCCHHHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHH
Confidence 5799999987766 8888888887 554 3 333 367888999998888877665 899998776 57799999
Q ss_pred hh--ccCCcEEEecCC
Q 028883 132 AA--NSQILVIRVPLL 145 (202)
Q Consensus 132 A~--~T~~PVIgVP~~ 145 (202)
|+ +...|+|.||+.
T Consensus 104 A~~~~rgip~i~IPTT 119 (348)
T 1ujn_A 104 AATYLRGVAYLAFPTT 119 (348)
T ss_dssp HHHBTTCCEEEEEECS
T ss_pred HHHhccCCCEEEecCc
Confidence 96 567999999995
No 34
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=95.32 E-value=0.95 Score=37.01 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=62.2
Q ss_pred CCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh-
Q 028883 58 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 133 (202)
Q Consensus 58 ~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~- 133 (202)
+.+|+++.-+.++ ..+.+.+.+.++++|+ ++.+......+++..++++.+..++++.||........+...+..
T Consensus 2 ~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~ 79 (313)
T 3m9w_A 2 EVKIGMAIDDLRLERWQKDRDIFVKKAESLGA--KVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA 79 (313)
T ss_dssp -CEEEEEESCCSSSTTHHHHHHHHHHHHHTSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHH
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHH
Confidence 3578999876443 5567778888889985 666777788888888899998888999888877666655555544
Q ss_pred -ccCCcEEEec
Q 028883 134 -NSQILVIRVP 143 (202)
Q Consensus 134 -~T~~PVIgVP 143 (202)
....|||.+=
T Consensus 80 ~~~~iPvV~~~ 90 (313)
T 3m9w_A 80 KQEGIKVLAYD 90 (313)
T ss_dssp HTTTCEEEEES
T ss_pred HHCCCeEEEEC
Confidence 3578998764
No 35
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=95.26 E-value=0.75 Score=37.12 Aligned_cols=83 Identities=11% Similarity=0.094 Sum_probs=60.3
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+...|+++..+.++ ..+.+.+.+.+++.|+ ++.+...+..+++..++++.+..++++-||...... ....+.-
T Consensus 7 ~~~~Igvv~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~~ 82 (291)
T 3egc_A 7 RSNVVGLIVSDIENVFFAEVASGVESEARHKGY--SVLLANTAEDIVREREAVGQFFERRVDGLILAPSEG--EHDYLRT 82 (291)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCSS--CCHHHHH
T ss_pred CCcEEEEEECCCcchHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEeCCCC--ChHHHHH
Confidence 44689999988777 3556677778888885 677788888999999999998888898777655433 2233332
Q ss_pred --ccCCcEEEec
Q 028883 134 --NSQILVIRVP 143 (202)
Q Consensus 134 --~T~~PVIgVP 143 (202)
....|||.+=
T Consensus 83 ~~~~~iPvV~~~ 94 (291)
T 3egc_A 83 ELPKTFPIVAVN 94 (291)
T ss_dssp SSCTTSCEEEES
T ss_pred hhccCCCEEEEe
Confidence 3578888654
No 36
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=95.22 E-value=0.21 Score=40.77 Aligned_cols=126 Identities=12% Similarity=0.111 Sum_probs=82.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQIL 138 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~P 138 (202)
.++.+++.... ..+.+.+++.+++...++.+ ...++..+.++++ ..|++|||+-.|.+. .+-.+++.|
T Consensus 5 ~~I~~iapy~~---l~~~~~~i~~e~~~~i~i~~----~~l~~~v~~a~~~-~~~~dVIISRGgta~----~lr~~~~iP 72 (196)
T 2q5c_A 5 LKIALISQNEN---LLNLFPKLALEKNFIPITKT----ASLTRASKIAFGL-QDEVDAIISRGATSD----YIKKSVSIP 72 (196)
T ss_dssp CEEEEEESCHH---HHHHHHHHHHHHTCEEEEEE----CCHHHHHHHHHHH-TTTCSEEEEEHHHHH----HHHTTCSSC
T ss_pred CcEEEEEccHH---HHHHHHHHHhhhCCceEEEE----CCHHHHHHHHHHh-cCCCeEEEECChHHH----HHHHhCCCC
Confidence 35666655433 33355556667776444433 3467777888888 788999998766555 445668899
Q ss_pred EEEecCCCCCCChhhHHHhhcCCC--CCeeeEEecCChhhHHHHHHHHHccC--------CHHHHHHHHHHHh
Q 028883 139 VIRVPLLSEDWSEDDVINSIRMPS--HVQVASVPRNNAKNAALYAVKVLGIA--------DEDLLERIRKYVE 201 (202)
Q Consensus 139 VIgVP~~~~~l~G~DLlS~vqMP~--GvpVatV~I~n~~NAAl~Aa~IL~~~--------d~~l~~kl~~~~~ 201 (202)
||-+|++ |.|++..|+... +-.+|.|+-.|..+.+-.-.++|+.. .+++.+.+++.++
T Consensus 73 VV~I~~s-----~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~ 140 (196)
T 2q5c_A 73 SISIKVT-----RFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKT 140 (196)
T ss_dssp EEEECCC-----HHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHH
T ss_pred EEEEcCC-----HhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHH
Confidence 9999865 567333333211 22689998888888877778888853 3466677666554
No 37
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=95.05 E-value=1.1 Score=36.02 Aligned_cols=85 Identities=14% Similarity=0.067 Sum_probs=62.2
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+..+|+++.-+.+|- ...+.+.+.++++|+ ++.+...+..+++..++++.+..++++.||............+.-
T Consensus 4 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~ 81 (291)
T 3l49_A 4 EGKTIGITAIGTDHDWDLKAYQAQIAEIERLGG--TAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQK 81 (291)
T ss_dssp TTCEEEEEESCCSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHH
Confidence 446899999877763 356677888888885 667778888999988999998888899888765543344444432
Q ss_pred --ccCCcEEEec
Q 028883 134 --NSQILVIRVP 143 (202)
Q Consensus 134 --~T~~PVIgVP 143 (202)
....|||.+=
T Consensus 82 ~~~~~iPvV~~~ 93 (291)
T 3l49_A 82 INDAGIPLFTVD 93 (291)
T ss_dssp HHHTTCCEEEES
T ss_pred HHHCCCcEEEec
Confidence 3578998863
No 38
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=94.76 E-value=0.63 Score=38.12 Aligned_cols=107 Identities=9% Similarity=0.128 Sum_probs=69.9
Q ss_pred CCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCc---hhhhh
Q 028883 58 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH---LSGVA 131 (202)
Q Consensus 58 ~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~---Lpgvv 131 (202)
...|++++.+.++ ..+.+.+.+.+++.|+ ++.+...+..+++..++++.+..++++-||........ +.-..
T Consensus 15 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~ 92 (303)
T 3kke_A 15 SGTIGLIVPDVNNAVFADMFSGVQMAASGHST--DVLLGQIDAPPRGTQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVL 92 (303)
T ss_dssp --CEEEEESCTTSTTHHHHHHHHHHHHHHTTC--CEEEEECCSTTHHHHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHH
T ss_pred CCEEEEEeCCCcChHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHh
Confidence 3579999987776 5667778888889986 55567788888888899999888889877766544332 22222
Q ss_pred hhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHH
Q 028883 132 AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVL 185 (202)
Q Consensus 132 A~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL 185 (202)
. ..|||.+=... ++ ++..|.+||-..+-+.+-.++
T Consensus 93 -~--~iPvV~i~~~~---------------~~-~~~~V~~D~~~~g~~a~~~L~ 127 (303)
T 3kke_A 93 -E--GVPAVTINSRV---------------PG-RVGSVILDDQKGGGIATEHLI 127 (303)
T ss_dssp -T--TSCEEEESCCC---------------TT-CCCEEEECHHHHHHHHHHHHH
T ss_pred -C--CCCEEEECCcC---------------CC-CCCEEEECcHHHHHHHHHHHH
Confidence 2 78888763221 22 345576776655544444443
No 39
>1kq3_A Glycerol dehydrogenase; structural genomics, joint center FO structural genomics, JCSG, protein structure initiative, PS oxidoreductase; 1.50A {Thermotoga maritima} SCOP: e.22.1.2
Probab=94.62 E-value=0.0048 Score=54.71 Aligned_cols=85 Identities=12% Similarity=0.079 Sum_probs=60.6
Q ss_pred CeEEEEecCCCCHHH-HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCC-cCchhhhhhhccC
Q 028883 59 PIVGIIMESDLDLPV-MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAANSQ 136 (202)
Q Consensus 59 ~~V~IimGS~SD~~v-~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~-aa~LpgvvA~~T~ 136 (202)
.+|.||++....... .++..+.|++.| +++.+.+-+-+.+.+.+..+.+.+ ++++||++-|+ ..-+++.+|....
T Consensus 42 ~~~liVtd~~~~~~~~~~~v~~~L~~~g--~~~~~~~ge~~~~~v~~~~~~~~~-~~d~IIavGGGsv~D~aK~iA~~~~ 118 (376)
T 1kq3_A 42 ERAFVVIDDFVDKNVLGENFFSSFTKVR--VNKQIFGGECSDEEIERLSGLVEE-ETDVVVGIGGGKTLDTAKAVAYKLK 118 (376)
T ss_dssp SEEEEEECHHHHHHTTCTTGGGGCSSSE--EEEEECCSSCBHHHHHHHHTTCCT-TCCEEEEEESHHHHHHHHHHHHHTT
T ss_pred CeEEEEECccHHhhccHHHHHHHHHHcC--CeEEEeCCCCCHHHHHHHHHHHhc-CCCEEEEeCCcHHHHHHHHHHHhcC
Confidence 489999976432211 344445555555 345555555555678888777777 88999999887 5569999999999
Q ss_pred CcEEEecCCC
Q 028883 137 ILVIRVPLLS 146 (202)
Q Consensus 137 ~PVIgVP~~~ 146 (202)
+|+|.||+..
T Consensus 119 ~p~i~IPTTa 128 (376)
T 1kq3_A 119 KPVVIVPTIA 128 (376)
T ss_dssp CCEEEEESSC
T ss_pred CCEEEecCcc
Confidence 9999999975
No 40
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=94.05 E-value=0.02 Score=50.39 Aligned_cols=85 Identities=16% Similarity=0.093 Sum_probs=63.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHHhhcCc---eEEEEecCC-cCchhhhh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGI---KIIIVGDGV-EAHLSGVA 131 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S---aHRtp~~l~~~~~~~~~~g~---~ViIa~AG~-aa~Lpgvv 131 (202)
.+|.||++........++..+.|++.+ +++.+.. .|++.+.+.+..+.+.+.++ ++||++.|+ ..-+++++
T Consensus 27 ~~~livtd~~v~~~~~~~v~~~L~~~~--~~~~~~~~~e~~k~~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~D~ak~~ 104 (343)
T 3clh_A 27 QKALIISDSIVAGLHLPYLLERLKALE--VRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFA 104 (343)
T ss_dssp SCEEEEEEHHHHTTTHHHHHTTEECSC--EEEEEECSSGGGCSHHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHHH
T ss_pred CEEEEEECCcHHHHHHHHHHHHHHhCC--cEEEEeCCCCCCCCHHHHHHHHHHHHhcCCCCCceEEEECChHHHHHHHHH
Confidence 579999876543224555555554433 3444443 57789999999999988888 999999887 56799999
Q ss_pred h--hccCCcEEEecCC
Q 028883 132 A--ANSQILVIRVPLL 145 (202)
Q Consensus 132 A--~~T~~PVIgVP~~ 145 (202)
| ....+|+|.||+.
T Consensus 105 A~~~~rgip~i~IPTT 120 (343)
T 3clh_A 105 SSIYFRGIDFINIPTT 120 (343)
T ss_dssp HHHBTTCCEEEEEECS
T ss_pred HHHhccCCCEEEeCCc
Confidence 9 4678999999998
No 41
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=93.76 E-value=1.5 Score=35.31 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=60.3
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCC--CchHHHHHHHHHhhcCceEEEEecCCcCchhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQ--NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 131 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHR--tp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv 131 (202)
+..+|++++-+.+|- .+.+.+.+.++++|+ ++.+...+. .+++..++++.+..++++.||........+...+
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~ 81 (304)
T 3o1i_D 4 SDEKICAIYPHLKDSYWLSVNYGMVSEAEKQGV--NLRVLEAGGYPNKSRQEQQLALCTQWGANAIILGTVDPHAYEHNL 81 (304)
T ss_dssp -CCEEEEEESCSCSHHHHHHHHHHHHHHHHHTC--EEEEEECSSTTCHHHHHHHHHHHHHHTCSEEEECCSSTTSSTTTH
T ss_pred CCcEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--eEEEEcCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhHHHHHH
Confidence 446899999887763 345566777788885 677777777 8888888888888888998887766555444444
Q ss_pred hhc-cCCcEEEe
Q 028883 132 AAN-SQILVIRV 142 (202)
Q Consensus 132 A~~-T~~PVIgV 142 (202)
... ...|||.+
T Consensus 82 ~~~~~~iPvV~~ 93 (304)
T 3o1i_D 82 KSWVGNTPVFAT 93 (304)
T ss_dssp HHHTTTSCEEEC
T ss_pred HHHcCCCCEEEe
Confidence 322 57898876
No 42
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=93.56 E-value=2.4 Score=34.20 Aligned_cols=127 Identities=13% Similarity=0.148 Sum_probs=76.8
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+...|+++.-..++ ....+.+.+.+++.|+ ++.+...+..+++..++++.+..++++-||........ ...+.-
T Consensus 19 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~-~~~~~~ 95 (293)
T 2iks_A 19 RTRSIGLVIPDLENTSYTRIANYLERQARQRGY--QLLIACSEDQPDNEMRCIEHLLQRQVDAIIVSTSLPPE-HPFYQR 95 (293)
T ss_dssp CCCEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSCTT-CHHHHT
T ss_pred CCcEEEEEeCCCcCcHHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCc-HHHHHH
Confidence 34689999876655 3455666777788885 56667777788888888888888888877776544322 222222
Q ss_pred --ccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHccC------------CHHHHHHHHHH
Q 028883 134 --NSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIA------------DEDLLERIRKY 199 (202)
Q Consensus 134 --~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~~------------d~~l~~kl~~~ 199 (202)
....||+.+=.... ..+ +..|..||...+.+++-.++... .....+|++.|
T Consensus 96 ~~~~~iPvV~~~~~~~-------------~~~--~~~V~~d~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf 160 (293)
T 2iks_A 96 WANDPFPIVALDRALD-------------REH--FTSVVGADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGF 160 (293)
T ss_dssp TTTSSSCEEEEESCCC-------------TTT--CEEEEECHHHHHHHHHHHHHTSCCSSEEEEEECTTSHHHHHHHHHH
T ss_pred HHhCCCCEEEECCccC-------------cCC--CCEEEecCHHHHHHHHHHHHHCCCCEEEEEecCcccccHHHHHHHH
Confidence 34678887632211 012 34566677665555544444332 22345666666
Q ss_pred Hh
Q 028883 200 VE 201 (202)
Q Consensus 200 ~~ 201 (202)
++
T Consensus 161 ~~ 162 (293)
T 2iks_A 161 RT 162 (293)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 43
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=93.49 E-value=1.3 Score=35.81 Aligned_cols=83 Identities=6% Similarity=0.085 Sum_probs=51.8
Q ss_pred CCCeEEEEecCCCC-----HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhh
Q 028883 57 DAPIVGIIMESDLD-----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 131 (202)
Q Consensus 57 ~~~~V~IimGS~SD-----~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv 131 (202)
+...|++++.+.+| ..+.+.+.+.++++|. ++.+......++...++.+.+..++++-||........ ..+
T Consensus 7 ~s~~Igvv~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~--~~~ 82 (288)
T 3gv0_A 7 KTNVIALVLSVDEELMGFTSQMVFGITEVLSTTQY--HLVVTPHIHAKDSMVPIRYILETGSADGVIISKIEPND--PRV 82 (288)
T ss_dssp CCCEEEEECBCCCCSSCHHHHHHHHHHHHHTTSSC--EEEECCBSSGGGTTHHHHHHHHHTCCSEEEEESCCTTC--HHH
T ss_pred CCCEEEEEecCCccccHHHHHHHHHHHHHHHHcCC--EEEEecCCcchhHHHHHHHHHHcCCccEEEEecCCCCc--HHH
Confidence 44689999987665 2344555566667774 66677777667766677766667788877665322221 222
Q ss_pred h--hccCCcEEEec
Q 028883 132 A--ANSQILVIRVP 143 (202)
Q Consensus 132 A--~~T~~PVIgVP 143 (202)
. .....|||.+=
T Consensus 83 ~~l~~~~iPvV~i~ 96 (288)
T 3gv0_A 83 RFMTERNMPFVTHG 96 (288)
T ss_dssp HHHHHTTCCEEEES
T ss_pred HHHhhCCCCEEEEC
Confidence 2 23578988654
No 44
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=93.48 E-value=1.5 Score=35.12 Aligned_cols=83 Identities=12% Similarity=0.052 Sum_probs=57.3
Q ss_pred CCCeEEEEecC-----CCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchh
Q 028883 57 DAPIVGIIMES-----DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (202)
Q Consensus 57 ~~~~V~IimGS-----~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lp 128 (202)
+...|++++.+ .++ ..+.+.+.+.++++|+ ++.+...+..++...++++.+..++++-||........
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~-- 82 (292)
T 3k4h_A 7 TTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGY--ALYMSTGETEEEIFNGVVKMVQGRQIGGIILLYSREND-- 82 (292)
T ss_dssp CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTC--EEEECCCCSHHHHHHHHHHHHHTTCCCEEEESCCBTTC--
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCCh--
Confidence 44689999988 444 2456667778888885 66677778778888888888888889877775543222
Q ss_pred hhhh--hccCCcEEEec
Q 028883 129 GVAA--ANSQILVIRVP 143 (202)
Q Consensus 129 gvvA--~~T~~PVIgVP 143 (202)
..+. .....|||.+=
T Consensus 83 ~~~~~l~~~~iPvV~~~ 99 (292)
T 3k4h_A 83 RIIQYLHEQNFPFVLIG 99 (292)
T ss_dssp HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHCCCCEEEEC
Confidence 2222 24578988763
No 45
>3rf7_A Iron-containing alcohol dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: NAD EPE; 2.12A {Shewanella denitrificans}
Probab=93.38 E-value=0.071 Score=47.93 Aligned_cols=86 Identities=10% Similarity=0.029 Sum_probs=59.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHHhhcC---ceEEEEecCCcCc-hhhhhhh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERG---IKIIIVGDGVEAH-LSGVAAA 133 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev-~V~SaHRtp~~l~~~~~~~~~~g---~~ViIa~AG~aa~-LpgvvA~ 133 (202)
.++.||++..--. ....+.|+.-|+.+.+ .-...+.+.+.+.+.++.+.+.+ +++||++-|++.. ++..+|.
T Consensus 54 ~~~liVtd~~~~~---~~l~~~L~~~g~~~~~f~~v~~~pt~~~v~~~~~~~~~~~~~~~D~IIavGGGS~iD~AK~iA~ 130 (375)
T 3rf7_A 54 DFVVFLVDDVHQH---KPLAARVPNKAHDLVIYVNVDDEPTTVQVDELTAQVKAFNTKLPVSVVGLGGGSTMDLAKAVSL 130 (375)
T ss_dssp CCEEEEEEGGGTT---SHHHHHSCCCTTSEEEEECCSSCCBHHHHHHHHHHHHHHCSSCCSEEEEEESHHHHHHHHHHHH
T ss_pred CeEEEEECchhhh---hHHHHHHHhcCCeEEEEeCCCCCCCHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHH
Confidence 3577777643211 1233444444776542 22357788888989888887777 8999999999754 8888887
Q ss_pred cc------------------CCcEEEecCCCC
Q 028883 134 NS------------------QILVIRVPLLSE 147 (202)
Q Consensus 134 ~T------------------~~PVIgVP~~~~ 147 (202)
.. .+|+|.||+..+
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~P~i~IPTTag 162 (375)
T 3rf7_A 131 MLTNPGSSSEYQGWDLIKNPAVHHIGIPTVSG 162 (375)
T ss_dssp HTSSCSCGGGGCEESCCCSCCCCEEEEESSCS
T ss_pred HHhCCCCHHHhhccccccCCCCCEEEEcCCCc
Confidence 65 689999999753
No 46
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=93.30 E-value=2.6 Score=33.72 Aligned_cols=82 Identities=12% Similarity=0.175 Sum_probs=58.8
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+...|+++..+.+|- ...+.+.+.+++.|+ ++.+...+..+++..++++.+..++++-||...... ...+.-
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~---~~~~~~ 80 (276)
T 3jy6_A 6 SSKLIAVIVANIDDYFSTELFKGISSILESRGY--IGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN---PQTVQE 80 (276)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHTTTC--EEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC---HHHHHH
T ss_pred CCcEEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc---HHHHHH
Confidence 446899999887663 345556666777774 777788888898888899988888898777765444 444433
Q ss_pred --ccCCcEEEec
Q 028883 134 --NSQILVIRVP 143 (202)
Q Consensus 134 --~T~~PVIgVP 143 (202)
....|||-+=
T Consensus 81 l~~~~iPvV~i~ 92 (276)
T 3jy6_A 81 ILHQQMPVVSVD 92 (276)
T ss_dssp HHTTSSCEEEES
T ss_pred HHHCCCCEEEEe
Confidence 2578998763
No 47
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=93.12 E-value=2.6 Score=33.24 Aligned_cols=110 Identities=11% Similarity=0.125 Sum_probs=70.2
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh--h
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--A 133 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA--~ 133 (202)
..|+++..+.++- ...+.+.+.+++.|+ ++.+...+..+++..++++.+..++++-||........ ...+. .
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~ 79 (272)
T 3o74_A 3 RTLGFILPDLENPSYARIAKQLEQGARARGY--QLLIASSDDQPDSERQLQQLFRARRCDALFVASCLPPE-DDSYRELQ 79 (272)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCCCCSS-CCHHHHHH
T ss_pred eEEEEEeCCCcChhHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEecCcccc-HHHHHHHH
Confidence 5799999887763 345667777788876 56667788889988899998888889877776554222 12222 2
Q ss_pred ccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHc
Q 028883 134 NSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLG 186 (202)
Q Consensus 134 ~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~ 186 (202)
....|||.+=.... +-++..|..||-..+-+++-.++.
T Consensus 80 ~~~iPvV~~~~~~~---------------~~~~~~V~~d~~~~~~~a~~~L~~ 117 (272)
T 3o74_A 80 DKGLPVIAIDRRLD---------------PAHFCSVISDDRDASRQLAASLLS 117 (272)
T ss_dssp HTTCCEEEESSCCC---------------TTTCEEEEECHHHHHHHHHHHHHT
T ss_pred HcCCCEEEEccCCC---------------ccccCEEEEchHHHHHHHHHHHHH
Confidence 35788886532211 112355766766555554444443
No 48
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=93.08 E-value=2.8 Score=34.76 Aligned_cols=84 Identities=8% Similarity=0.087 Sum_probs=58.5
Q ss_pred CCCeEEEEecC--CCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhh
Q 028883 57 DAPIVGIIMES--DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 131 (202)
Q Consensus 57 ~~~~V~IimGS--~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv 131 (202)
+...|+++... .++ ..+.+.+.+.+++.|+ ++.+...+..+++-.++++.+..++++-||........ ..+.
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~ 136 (338)
T 3dbi_A 60 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSV-DEID 136 (338)
T ss_dssp CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTC--EEEEEECTTSHHHHHHHHHHHHHTTCSEEEECCSSSCH-HHHH
T ss_pred CCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCh-HHHH
Confidence 44689999987 444 3556777788888885 66777888889988888888888889877776543322 2222
Q ss_pred --hhccCCcEEEec
Q 028883 132 --AANSQILVIRVP 143 (202)
Q Consensus 132 --A~~T~~PVIgVP 143 (202)
......||+-+=
T Consensus 137 ~~~~~~~iPvV~~~ 150 (338)
T 3dbi_A 137 DIIDAHSQPIMVLN 150 (338)
T ss_dssp HHHHHCSSCEEEES
T ss_pred HHHHcCCCCEEEEc
Confidence 233568888653
No 49
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=93.03 E-value=0.89 Score=36.96 Aligned_cols=81 Identities=11% Similarity=0.064 Sum_probs=57.9
Q ss_pred CCCeEEEEecCCCC----HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh
Q 028883 57 DAPIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD----~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA 132 (202)
+...|++++.+.++ ..+.+.+.+.+++.|. ++.+...+..+++..++++.+..++++-||........ .+.
T Consensus 12 ~s~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~---~~~ 86 (301)
T 3miz_A 12 RSNTFGIITDYVSTTPYSVDIVRGIQDWANANGK--TILIANTGGSSEREVEIWKMFQSHRIDGVLYVTMYRRI---VDP 86 (301)
T ss_dssp CCCEEEEEESSTTTCCSCHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEEEEEEEE---CCC
T ss_pred CCCEEEEEeCCCcCcccHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEecCCccH---HHH
Confidence 34689999987665 2788889999999985 66677788888988899998888888866655433222 221
Q ss_pred --hccCCcEEEe
Q 028883 133 --ANSQILVIRV 142 (202)
Q Consensus 133 --~~T~~PVIgV 142 (202)
.....|||.+
T Consensus 87 ~~~~~~iPvV~~ 98 (301)
T 3miz_A 87 ESGDVSIPTVMI 98 (301)
T ss_dssp CCTTCCCCEEEE
T ss_pred HHHhCCCCEEEE
Confidence 2346788765
No 50
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=93.00 E-value=0.73 Score=37.79 Aligned_cols=83 Identities=12% Similarity=0.175 Sum_probs=60.1
Q ss_pred CeEEEEecCCCC---HHHHHHHHHHHHHhCC---CeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh
Q 028883 59 PIVGIIMESDLD---LPVMNDAARTLSDFGV---PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 132 (202)
Q Consensus 59 ~~V~IimGS~SD---~~v~~~a~~~L~~~gi---~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA 132 (202)
..|||+. +.++ -.+.+.+.+.|++.|. ...+.++..++.+++..++++.+.+++.+.||+.. .. +..-+..
T Consensus 3 ~~Igvi~-~~~~p~~~~i~~gi~~~l~~~gy~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~-~~-~~~~~~~ 79 (295)
T 3lft_A 3 AKIGVLQ-FVSHPSLDLIYKGIQDGLAEEGYKDDQVKIDFMNSEGDQSKVATMSKQLVANGNDLVVGIA-TP-AAQGLAS 79 (295)
T ss_dssp EEEEEEE-CSCCHHHHHHHHHHHHHHHHTTCCGGGEEEEEEECTTCHHHHHHHHHHHTTSSCSEEEEES-HH-HHHHHHH
T ss_pred eEEEEEE-ccCChhHHHHHHHHHHHHHHcCCCCCceEEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC-cH-HHHHHHH
Confidence 4789883 3333 3455677788889998 77888899999999999999999988899888764 22 2222333
Q ss_pred hccCCcEEEecC
Q 028883 133 ANSQILVIRVPL 144 (202)
Q Consensus 133 ~~T~~PVIgVP~ 144 (202)
.....||+-|-.
T Consensus 80 ~~~~iPvV~~~~ 91 (295)
T 3lft_A 80 ATKDLPVIMAAI 91 (295)
T ss_dssp HCSSSCEEEESC
T ss_pred cCCCCCEEEEec
Confidence 346789998753
No 51
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=93.00 E-value=2.8 Score=36.93 Aligned_cols=87 Identities=16% Similarity=0.097 Sum_probs=56.3
Q ss_pred CCCCeEEEEecC-CCCH----HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEec-CCcCchhh
Q 028883 56 TDAPIVGIIMES-DLDL----PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD-GVEAHLSG 129 (202)
Q Consensus 56 ~~~~~V~IimGS-~SD~----~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A-G~aa~Lpg 129 (202)
.++.+|++|.-+ -+|. .+.+-+.+..+++|-.+++.++......+..+++++++.++|+++||+.. +....+--
T Consensus 24 ~~~~kIglv~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~~~~d~~~~l~~l~~~g~d~Ii~~g~~~~~~~~~ 103 (356)
T 3s99_A 24 EEKLKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIKRIARAGNKLIFTTSFGYMDPTVK 103 (356)
T ss_dssp --CEEEEEECSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCCTTHHHHHHHHHHHHTTCSEEEECSGGGHHHHHH
T ss_pred CCCCEEEEEEccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCCCHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHH
Confidence 344679988854 5573 34555566667899667887776655566678888889889999888764 23444433
Q ss_pred hhhhccCCcEEEe
Q 028883 130 VAAANSQILVIRV 142 (202)
Q Consensus 130 vvA~~T~~PVIgV 142 (202)
+..-....|++-|
T Consensus 104 vA~~~Pdv~fv~i 116 (356)
T 3s99_A 104 VAKKFPDVKFEHA 116 (356)
T ss_dssp HHTTCTTSEEEEE
T ss_pred HHHHCCCCEEEEE
Confidence 3333446677766
No 52
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=92.87 E-value=3 Score=33.29 Aligned_cols=85 Identities=9% Similarity=0.121 Sum_probs=56.3
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCc-Cchhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAA 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a-a~LpgvvA 132 (202)
+..+|++++.+.++- ...+.+.+.+++.|. ++.+......+++..++++.+..++++.||...... ..+-..+.
T Consensus 6 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~l~ 83 (289)
T 1dbq_A 6 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLE 83 (289)
T ss_dssp --CEEEEEESCTTSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEcCCCChHHHHHHHHHHHhCCCCEEEEEeccCCHHHHHHHH
Confidence 346899999766552 345566777788885 556667778888888888888888888777665443 22333333
Q ss_pred hccCCcEEEec
Q 028883 133 ANSQILVIRVP 143 (202)
Q Consensus 133 ~~T~~PVIgVP 143 (202)
.....|||.+-
T Consensus 84 ~~~~iPvV~~~ 94 (289)
T 1dbq_A 84 EYRHIPMVVMD 94 (289)
T ss_dssp HTTTSCEEEEE
T ss_pred hccCCCEEEEc
Confidence 23578988763
No 53
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=92.75 E-value=2 Score=35.02 Aligned_cols=83 Identities=10% Similarity=0.100 Sum_probs=57.1
Q ss_pred CCCeEEEEecC-----CCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchh
Q 028883 57 DAPIVGIIMES-----DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (202)
Q Consensus 57 ~~~~V~IimGS-----~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lp 128 (202)
+...|+++... .++ ..+.+.+.+.+++.|+ ++.+...+..++...++++.+..++++-||........
T Consensus 21 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-- 96 (305)
T 3huu_A 21 KTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGY--STRMTVSENSGDLYHEVKTMIQSKSVDGFILLYSLKDD-- 96 (305)
T ss_dssp CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTC--EEEECCCSSHHHHHHHHHHHHHTTCCSEEEESSCBTTC--
T ss_pred CCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCcCCc--
Confidence 44689999987 444 3456677778888885 66677778788888888888888889877765433221
Q ss_pred hhhh--hccCCcEEEec
Q 028883 129 GVAA--ANSQILVIRVP 143 (202)
Q Consensus 129 gvvA--~~T~~PVIgVP 143 (202)
..+. .....|||-+=
T Consensus 97 ~~~~~l~~~~iPvV~i~ 113 (305)
T 3huu_A 97 PIEHLLNEFKVPYLIVG 113 (305)
T ss_dssp HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 2222 23578888763
No 54
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=92.73 E-value=3.1 Score=33.22 Aligned_cols=85 Identities=12% Similarity=0.090 Sum_probs=61.2
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+..+|++++.+.++ ....+.+.+.++++|+ ++.+...+..+++..++++.+..++++.||........+...+.-
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~ 84 (293)
T 3l6u_A 7 KRNIVGFTIVNDKHEFAQRLINAFKAEAKANKY--EALVATSQNSRISEREQILEFVHLKVDAIFITTLDDVYIGSAIEE 84 (293)
T ss_dssp --CEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHH
T ss_pred CCcEEEEEEecCCcHHHHHHHHHHHHHHHHcCC--EEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHH
Confidence 44689999988776 3345667777888876 666778888899888999998888898888766555554444432
Q ss_pred --ccCCcEEEec
Q 028883 134 --NSQILVIRVP 143 (202)
Q Consensus 134 --~T~~PVIgVP 143 (202)
....|||.+=
T Consensus 85 ~~~~~iPvV~~~ 96 (293)
T 3l6u_A 85 AKKAGIPVFAID 96 (293)
T ss_dssp HHHTTCCEEEES
T ss_pred HHHcCCCEEEec
Confidence 3578998863
No 55
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=92.50 E-value=3.3 Score=33.44 Aligned_cols=83 Identities=6% Similarity=-0.025 Sum_probs=54.6
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHH---HHHHHhhcCceEEEEecCCcCchhhh
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS---YALSAKERGIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~---~~~~~~~~g~~ViIa~AG~aa~Lpgv 130 (202)
+...|+++.-..+| ....+.+.+.+++.|. ++.+......+++..+ +++.+..++++-||....... ...
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~--~~~ 82 (290)
T 2rgy_A 7 QLGIIGLFVPTFFGSYYGTILKQTDLELRAVHR--HVVVATGCGESTPREQALEAVRFLIGRDCDGVVVISHDLH--DED 82 (290)
T ss_dssp -CCEEEEECSCSCSHHHHHHHHHHHHHHHHTTC--EEEEECCCSSSCHHHHHHHHHHHHHHTTCSEEEECCSSSC--HHH
T ss_pred CCCeEEEEeCCCCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhhhhHHHHHHHHHhcCccEEEEecCCCC--HHH
Confidence 34689999876555 2455566777788886 5666777777777777 788887788887777654432 222
Q ss_pred hh--hccCCcEEEec
Q 028883 131 AA--ANSQILVIRVP 143 (202)
Q Consensus 131 vA--~~T~~PVIgVP 143 (202)
+. .....|||.+-
T Consensus 83 ~~~l~~~~iPvV~~~ 97 (290)
T 2rgy_A 83 LDELHRMHPKMVFLN 97 (290)
T ss_dssp HHHHHHHCSSEEEES
T ss_pred HHHHhhcCCCEEEEc
Confidence 22 23568998763
No 56
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=92.41 E-value=0.83 Score=33.92 Aligned_cols=68 Identities=22% Similarity=0.250 Sum_probs=42.4
Q ss_pred HHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchh-----hh---hhhccCCcEEEecCCC
Q 028883 75 NDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-----GV---AAANSQILVIRVPLLS 146 (202)
Q Consensus 75 ~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lp-----gv---vA~~T~~PVIgVP~~~ 146 (202)
+++.+.++..|++++..+..- . -...+.+.+++.+++.||.++-+.+.+. ++ +.-+++.||+-||...
T Consensus 86 ~~~~~~~~~~g~~~~~~v~~G--~--~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~~~pVlvv~~~~ 161 (162)
T 1mjh_A 86 ENIKKELEDVGFKVKDIIVVG--I--PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKRKN 161 (162)
T ss_dssp HHHHHHHHHTTCEEEEEEEEE--C--HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEEEECCCC
T ss_pred HHHHHHHHHcCCceEEEEcCC--C--HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhCCCCEEEEeCCC
Confidence 344445556799888776542 2 2344555556677888888766544432 22 3456899999998653
No 57
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=92.21 E-value=1.2 Score=36.71 Aligned_cols=86 Identities=10% Similarity=0.007 Sum_probs=60.6
Q ss_pred CCCCCeEEEEecCCCC---HHHHHHHHHHHHHhCC----CeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCch
Q 028883 55 STDAPIVGIIMESDLD---LPVMNDAARTLSDFGV----PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 127 (202)
Q Consensus 55 ~~~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi----~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~L 127 (202)
.++...|||+. +-++ -.+.+.+.+.|++.|. ...+.++..++.+++..++++.+.+++.+.||+... .+ .
T Consensus 5 ~~~t~~IGvi~-~~~~p~~~~~~~gi~~~l~~~Gy~~g~~v~l~~~~~~~~~~~~~~~~~~l~~~~vDgII~~~~-~~-~ 81 (302)
T 2qh8_A 5 MAKTAKVAVSQ-IVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIAT-PT-A 81 (302)
T ss_dssp --CCEEEEEEE-SSCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHHTCCSEEEEESH-HH-H
T ss_pred ccCCcEEEEEE-eccChhHHHHHHHHHHHHHHcCCCCCCceEEEEecCCCCHHHHHHHHHHHHhCCCCEEEECCh-HH-H
Confidence 34557899984 4444 2345667778888888 778888999999999999999998888998887642 21 1
Q ss_pred hhhhhhccCCcEEEec
Q 028883 128 SGVAAANSQILVIRVP 143 (202)
Q Consensus 128 pgvvA~~T~~PVIgVP 143 (202)
..+.......||+-|-
T Consensus 82 ~~~~~~~~~iPvV~~~ 97 (302)
T 2qh8_A 82 QALVSATKTIPIVFTA 97 (302)
T ss_dssp HHHHHHCSSSCEEEEE
T ss_pred HHHHhcCCCcCEEEEe
Confidence 2223235678998774
No 58
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=92.06 E-value=1.5 Score=35.67 Aligned_cols=83 Identities=12% Similarity=0.139 Sum_probs=54.9
Q ss_pred CCCeEEEEecC-----CCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchh
Q 028883 57 DAPIVGIIMES-----DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS 128 (202)
Q Consensus 57 ~~~~V~IimGS-----~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lp 128 (202)
+...|++++.. .+| ..+.+.+.+.+++.|. ++.+...+..+++..++++.+..++++-||........
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~-- 81 (295)
T 3hcw_A 6 QTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGY--GTQTTVSNNMNDLMDEVYKMIKQRMVDAFILLYSKEND-- 81 (295)
T ss_dssp CSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTC--EEEECCCCSHHHHHHHHHHHHHTTCCSEEEESCCCTTC--
T ss_pred CCcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCC--EEEEEcCCCChHHHHHHHHHHHhCCcCEEEEcCcccCh--
Confidence 44689999843 233 3456677777788875 66677777777877888888888888877765433221
Q ss_pred hhhh--hccCCcEEEec
Q 028883 129 GVAA--ANSQILVIRVP 143 (202)
Q Consensus 129 gvvA--~~T~~PVIgVP 143 (202)
..+. .....|||-+=
T Consensus 82 ~~~~~l~~~~iPvV~i~ 98 (295)
T 3hcw_A 82 PIKQMLIDESMPFIVIG 98 (295)
T ss_dssp HHHHHHHHTTCCEEEES
T ss_pred HHHHHHHhCCCCEEEEC
Confidence 2222 23578988763
No 59
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=92.04 E-value=2.9 Score=33.97 Aligned_cols=110 Identities=12% Similarity=0.083 Sum_probs=63.4
Q ss_pred CCCeEEEEec----CCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh
Q 028883 57 DAPIVGIIME----SDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 129 (202)
Q Consensus 57 ~~~~V~IimG----S~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg 129 (202)
+...|++++- ..++ ..+.+.+.+.+++.|.. +.+...+. ++...++.+.+..++++-||........ .
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~--~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~~~~~--~ 79 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLD--LLLIPDEP-GEKYQSLIHLVETRRVDALIVAHTQPED--F 79 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCE--EEEEEECT-TCCCHHHHHHHHHTCCSEEEECSCCSSC--H
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCE--EEEEeCCC-hhhHHHHHHHHHcCCCCEEEEeCCCCCh--H
Confidence 3468999997 4444 34566777788888864 44444443 5555666676767788877766544332 2
Q ss_pred hhh--hccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHc
Q 028883 130 VAA--ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLG 186 (202)
Q Consensus 130 vvA--~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~ 186 (202)
.+. .....|||-+=... .+-++..|.+||-..+.+++-.++.
T Consensus 80 ~~~~l~~~~iPvV~~~~~~---------------~~~~~~~V~~D~~~~~~~a~~~L~~ 123 (294)
T 3qk7_A 80 RLQYLQKQNFPFLALGRSH---------------LPKPYAWFDFDNHAGASLAVKRLLE 123 (294)
T ss_dssp HHHHHHHTTCCEEEESCCC---------------CSSCCEEEEECHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEECCCC---------------CCCCCCEEEcChHHHHHHHHHHHHH
Confidence 222 23468988753321 1122355777776555544444443
No 60
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=91.92 E-value=0.88 Score=38.13 Aligned_cols=87 Identities=11% Similarity=0.081 Sum_probs=61.0
Q ss_pred CCCCCCeEEEEecCCCCHHHHH----HHHHHHHHhCC----CeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC
Q 028883 54 DSTDAPIVGIIMESDLDLPVMN----DAARTLSDFGV----PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (202)
Q Consensus 54 ~~~~~~~V~IimGS~SD~~v~~----~a~~~L~~~gi----~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa 125 (202)
...+..+|||+- --+-|-.. ...+.|++.|. +.++.+..+...+.++.++++++..++.++||+++--+
T Consensus 4 ~~~~~~~igi~q--~~~hp~ld~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~~~~DlIiai~t~a- 80 (302)
T 3lkv_A 4 IMAKTAKVAVSQ--IVEHPALDATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVGENPDVLVGIATPT- 80 (302)
T ss_dssp ---CCEEEEEEE--SCCCHHHHHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHTTCCSEEEEESHHH-
T ss_pred hhcCCceEEEEE--eecChhHHHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHhcCCcEEEEcCCHH-
Confidence 345667899883 12333333 34567777765 57889999999999999999999999999999875332
Q ss_pred chhhhhhhccCCcEEEecC
Q 028883 126 HLSGVAAANSQILVIRVPL 144 (202)
Q Consensus 126 ~LpgvvA~~T~~PVIgVP~ 144 (202)
.-.+.......||+-+-+
T Consensus 81 -a~a~~~~~~~iPVVf~~v 98 (302)
T 3lkv_A 81 -AQALVSATKTIPIVFTAV 98 (302)
T ss_dssp -HHHHHHHCSSSCEEEEEE
T ss_pred -HHHHHhhcCCCCeEEEec
Confidence 334555667889987744
No 61
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=91.90 E-value=4.8 Score=33.46 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=60.5
Q ss_pred CCeEEEEecCCCC----HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhh--cCceEEEEecCCcCchhhhh
Q 028883 58 APIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVEAHLSGVA 131 (202)
Q Consensus 58 ~~~V~IimGS~SD----~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~--~g~~ViIa~AG~aa~Lpgvv 131 (202)
.++|++++-+.++ ..+.+.+.+.++++|+ ++.+......+++..+.++++.. ++++.||... ........+
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~-~~~~~~~~~ 79 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGL--DLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN-EQYVAPQIL 79 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC-CSSHHHHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCC--eEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC-chhhHHHHH
Confidence 4689999998887 3456667777888987 55566788888888888888777 4888777764 444555555
Q ss_pred hh--ccCCcEEEecC
Q 028883 132 AA--NSQILVIRVPL 144 (202)
Q Consensus 132 A~--~T~~PVIgVP~ 144 (202)
.- ....|||.+=.
T Consensus 80 ~~~~~~giPvV~~~~ 94 (350)
T 3h75_A 80 RLSQGSGIKLFIVNS 94 (350)
T ss_dssp HHHTTSCCEEEEEES
T ss_pred HHHHhCCCcEEEEcC
Confidence 43 35789987643
No 62
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=91.49 E-value=2.2 Score=35.31 Aligned_cols=83 Identities=12% Similarity=0.071 Sum_probs=58.3
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEE-ccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh-
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 133 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~-SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~- 133 (202)
.+|++++-..++- ...+.+.+.++++|+ ++.+. .....++.-.+.++++..++++.||...-...++..++.-
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~g~~~~~~~~g~--~~~~~~~~~~d~~~q~~~i~~li~~~vdgiii~~~~~~~~~~~~~~a 81 (316)
T 1tjy_A 4 ERIAFIPKLVGVGFFTSGGNGAQEAGKALGI--DVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRA 81 (316)
T ss_dssp CEEEEECSSSSSHHHHHHHHHHHHHHHHHTC--EEEECCCSSCCHHHHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHH
T ss_pred CEEEEEeCCCCChHHHHHHHHHHHHHHHhCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHH
Confidence 5799998766552 233455566778884 66665 4677888888888888888999888877666665555532
Q ss_pred -ccCCcEEEec
Q 028883 134 -NSQILVIRVP 143 (202)
Q Consensus 134 -~T~~PVIgVP 143 (202)
....|||.+-
T Consensus 82 ~~~gipvV~~d 92 (316)
T 1tjy_A 82 MQRGVKILTWD 92 (316)
T ss_dssp HHTTCEEEEES
T ss_pred HHCcCEEEEec
Confidence 3578999873
No 63
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=91.47 E-value=5.2 Score=32.99 Aligned_cols=86 Identities=10% Similarity=0.056 Sum_probs=58.5
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcC--ceEEEEecCCcCchhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERG--IKIIIVGDGVEAHLSGVA 131 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g--~~ViIa~AG~aa~Lpgvv 131 (202)
+..+|+++..+.++- ...+.+.+.+++.|+. +.+......+++..++++.+..++ ++.||........+...+
T Consensus 4 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~--l~~~~~~~~~~~~~~~i~~l~~~~~~vdgiIi~~~~~~~~~~~~ 81 (332)
T 2rjo_A 4 GQTTLACSFRSLTNPYYTAFNKGAQSFAKSVGLP--YVPLTTEGSSEKGIADIRALLQKTGGNLVLNVDPNDSADARVIV 81 (332)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHHTCC--EEEEECTTCHHHHHHHHHHHHHHTTTCEEEEECCSSHHHHHHHH
T ss_pred CccEEEEEecCCCcHHHHHHHHHHHHHHHHcCCE--EEEecCCCCHHHHHHHHHHHHHCCCCCCEEEEeCCCHHHHHHHH
Confidence 346899999776652 4556677778889875 555667777888888888887788 988887655443333333
Q ss_pred hh--ccCCcEEEecC
Q 028883 132 AA--NSQILVIRVPL 144 (202)
Q Consensus 132 A~--~T~~PVIgVP~ 144 (202)
.- ....|||.+-.
T Consensus 82 ~~~~~~~iPvV~~~~ 96 (332)
T 2rjo_A 82 EACSKAGAYVTTIWN 96 (332)
T ss_dssp HHHHHHTCEEEEESC
T ss_pred HHHHHCCCeEEEECC
Confidence 32 35689988743
No 64
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=91.46 E-value=3.2 Score=34.58 Aligned_cols=82 Identities=12% Similarity=0.073 Sum_probs=57.5
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh-
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA- 132 (202)
+...|+++..+.++ ..+.+.+.+.++++|+ ++.+...+..+++..++++.+..++++-||........ ..+.
T Consensus 67 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdGiIi~~~~~~~--~~~~~ 142 (344)
T 3kjx_A 67 RVNLVAVIIPSLSNMVFPEVLTGINQVLEDTEL--QPVVGVTDYLPEKEEKVLYEMLSWRPSGVIIAGLEHSE--AARAM 142 (344)
T ss_dssp CCSEEEEEESCSSSSSHHHHHHHHHHHHTSSSS--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCH--HHHHH
T ss_pred CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEECCCCCH--HHHHH
Confidence 34689999987766 4556667777777775 66777888899999999998888888876665432221 2222
Q ss_pred -hccCCcEEEe
Q 028883 133 -ANSQILVIRV 142 (202)
Q Consensus 133 -~~T~~PVIgV 142 (202)
.....||+-+
T Consensus 143 l~~~~iPvV~i 153 (344)
T 3kjx_A 143 LDAAGIPVVEI 153 (344)
T ss_dssp HHHCSSCEEEE
T ss_pred HHhCCCCEEEE
Confidence 2357899876
No 65
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=91.15 E-value=5.4 Score=32.53 Aligned_cols=83 Identities=16% Similarity=0.151 Sum_probs=54.6
Q ss_pred CeEEEEecCCCC--HHHHHHHHHHHHHhCCCeEEEEEc-cCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh--
Q 028883 59 PIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-- 133 (202)
Q Consensus 59 ~~V~IimGS~SD--~~v~~~a~~~L~~~gi~~ev~V~S-aHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~-- 133 (202)
.+|+++....++ ....+.+.+.++++|+ ++.+.. .+..+++..++++.+..++++.||........+...+.-
T Consensus 2 ~~Ig~i~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 79 (313)
T 2h3h_A 2 LTIGVIGKSVHPYWSQVEQGVKAAGKALGV--DTKFFVPQKEDINAQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKAL 79 (313)
T ss_dssp CEEEEECSCSSHHHHHHHHHHHHHHHHHTC--EEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHH
T ss_pred eEEEEEeCCCcHHHHHHHHHHHHHHHHcCC--EEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHH
Confidence 368888766554 2344556667788886 455543 366788888888888788899888766555444334432
Q ss_pred ccCCcEEEec
Q 028883 134 NSQILVIRVP 143 (202)
Q Consensus 134 ~T~~PVIgVP 143 (202)
....|||.+=
T Consensus 80 ~~~iPvV~~~ 89 (313)
T 2h3h_A 80 EMGIPVVTLD 89 (313)
T ss_dssp HTTCCEEEES
T ss_pred HCCCeEEEeC
Confidence 3578998763
No 66
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=91.06 E-value=1.7 Score=32.95 Aligned_cols=71 Identities=15% Similarity=0.184 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCC-eEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh--------hhhccCCcEEEe
Q 028883 72 PVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRV 142 (202)
Q Consensus 72 ~v~~~a~~~L~~~gi~-~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv--------vA~~T~~PVIgV 142 (202)
..++++.+.++..|++ ++..+..- .| ..++++.+++.+++.||.++-+...+... +.-+++.||+-|
T Consensus 81 ~~l~~~~~~~~~~gv~~v~~~v~~G--~~--~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a~~PVlvV 156 (163)
T 1tq8_A 81 EILHDAKERAHNAGAKNVEERPIVG--AP--VDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIV 156 (163)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEECS--SH--HHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEecC--CH--HHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhCCCCEEEE
Confidence 4456667777778998 88777642 33 45566666677899888887665555543 334578999999
Q ss_pred cCCC
Q 028883 143 PLLS 146 (202)
Q Consensus 143 P~~~ 146 (202)
|...
T Consensus 157 ~~~~ 160 (163)
T 1tq8_A 157 HTTE 160 (163)
T ss_dssp CCC-
T ss_pred eCCC
Confidence 8654
No 67
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=91.02 E-value=5.8 Score=32.69 Aligned_cols=85 Identities=7% Similarity=0.096 Sum_probs=57.6
Q ss_pred CCCeEEEEecC-CCC---HHHHHHHHHHHHHhCCCeEEEEEccC--CCchHHHHHHHHHhhcCceEEEEecCCcCchhhh
Q 028883 57 DAPIVGIIMES-DLD---LPVMNDAARTLSDFGVPYEIKILPPH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 57 ~~~~V~IimGS-~SD---~~v~~~a~~~L~~~gi~~ev~V~SaH--Rtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv 130 (202)
+...|++++.+ .++ ....+.+.+.+++.|..+.+.++..+ ..+++..++++.+..++++.||. .+........
T Consensus 42 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi-~~~~~~~~~~ 120 (342)
T 1jx6_A 42 RPIKISVVYPGQQVSDYWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIF-TLDTTRHRKF 120 (342)
T ss_dssp SCEEEEEEECCCSSCCHHHHHHHHHHHHHHHTTCCEEEEEEECCTTCCHHHHHHHHHHHHHTTCSEEEE-CCSSSTTHHH
T ss_pred CceEEEEEecCCcccHHHHHHHHHHHHHHHHcCCeEEEEecCCCCccCHHHHHHHHHHHHhcCCCEEEE-eCChHhHHHH
Confidence 34679999876 333 24667778888999988777765566 57777778888887888987777 5544433333
Q ss_pred hhh--ccCCcEEEe
Q 028883 131 AAA--NSQILVIRV 142 (202)
Q Consensus 131 vA~--~T~~PVIgV 142 (202)
+.- ....|||.+
T Consensus 121 ~~~~~~~~ip~V~~ 134 (342)
T 1jx6_A 121 VEHVLDSTNTKLIL 134 (342)
T ss_dssp HHHHHHHCSCEEEE
T ss_pred HHHHHHcCCCEEEE
Confidence 322 235787755
No 68
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=91.01 E-value=5 Score=31.95 Aligned_cols=84 Identities=11% Similarity=0.102 Sum_probs=57.0
Q ss_pred CCeEEEEecCCC--CH---HHHHHHHHHHHHhCCCeEEEEEcc--CCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh
Q 028883 58 APIVGIIMESDL--DL---PVMNDAARTLSDFGVPYEIKILPP--HQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 58 ~~~V~IimGS~S--D~---~v~~~a~~~L~~~gi~~ev~V~Sa--HRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv 130 (202)
..+|++++.+.+ |- ...+.+.+.+++.|+ ++.+... +..+++..++++.+..++++.||........+...
T Consensus 5 ~~~Ig~v~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~~~~~ 82 (289)
T 3brs_A 5 QYYMICIPKVLDDSSDFWSVLVEGAQMAAKEYEI--KLEFMAPEKEEDYLVQNELIEEAIKRKPDVILLAAADYEKTYDA 82 (289)
T ss_dssp CCEEEEECSCCCSSSHHHHHHHHHHHHHHHHHTC--EEEECCCSSTTCHHHHHHHHHHHHHTCCSEEEECCSCTTTTHHH
T ss_pred CcEEEEEeCCCCCCchHHHHHHHHHHHHHHHcCC--EEEEecCCCCCCHHHHHHHHHHHHHhCCCEEEEeCCChHHhHHH
Confidence 467999987665 42 344566677788885 5666555 67788888888888888898888776555544334
Q ss_pred hhh--ccCCcEEEec
Q 028883 131 AAA--NSQILVIRVP 143 (202)
Q Consensus 131 vA~--~T~~PVIgVP 143 (202)
+.- ....|||.+=
T Consensus 83 ~~~~~~~~iPvV~~~ 97 (289)
T 3brs_A 83 AKEIKDAGIKLIVID 97 (289)
T ss_dssp HTTTGGGTCEEEEES
T ss_pred HHHHHHCCCcEEEEC
Confidence 332 3568998763
No 69
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=90.93 E-value=1.7 Score=34.71 Aligned_cols=80 Identities=9% Similarity=0.054 Sum_probs=53.3
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+...|++++.+.++ ..+.+.+.+.+++.|+ ++.+...+ .++...++++.+..++++.|| ..... . ...+..
T Consensus 4 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~-~~~~~~~~~~~l~~~~vdgiI-~~~~~-~-~~~~~~ 77 (280)
T 3gyb_A 4 RTQLIAVLIDDYSNPWFIDLIQSLSDVLTPKGY--RLSVIDSL-TSQAGTDPITSALSMRPDGII-IAQDI-P-DFTVPD 77 (280)
T ss_dssp CCCEEEEEESCTTSGGGHHHHHHHHHHHGGGTC--EEEEECSS-SSCSSSCHHHHHHTTCCSEEE-EESCC---------
T ss_pred ccCEEEEEeCCCCChHHHHHHHHHHHHHHHCCC--EEEEEeCC-CchHHHHHHHHHHhCCCCEEE-ecCCC-C-hhhHhh
Confidence 34689999988776 5667777778888885 67777887 887777788888788899888 43322 2 223333
Q ss_pred ccCCcEEEec
Q 028883 134 NSQILVIRVP 143 (202)
Q Consensus 134 ~T~~PVIgVP 143 (202)
...|||.+=
T Consensus 78 -~~iPvV~~~ 86 (280)
T 3gyb_A 78 -SLPPFVIAG 86 (280)
T ss_dssp --CCCEEEES
T ss_pred -cCCCEEEEC
Confidence 677887653
No 70
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=90.75 E-value=4.9 Score=31.57 Aligned_cols=83 Identities=14% Similarity=0.171 Sum_probs=58.3
Q ss_pred CeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEc--cCCCchHHHHHHHHHhhcC-ceEEEEecCCcCchhhhhh
Q 028883 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILP--PHQNCKEALSYALSAKERG-IKIIIVGDGVEAHLSGVAA 132 (202)
Q Consensus 59 ~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~S--aHRtp~~l~~~~~~~~~~g-~~ViIa~AG~aa~LpgvvA 132 (202)
++|+++.-+.++ ....+.+.+.++++|+. +.+.. .+..+++..+.++.+..++ ++.||............+.
T Consensus 1 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~~--~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~ 78 (276)
T 3ksm_A 1 PKLLLVLKGDSNAYWRQVYLGAQKAADEAGVT--LLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLTPSVA 78 (276)
T ss_dssp CEEEEECSCSSSTHHHHHHHHHHHHHHHHTCE--EEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHH
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHHHcCCE--EEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHH
Confidence 368888877665 34566777788889874 44555 6678888888888888888 9888877644444444443
Q ss_pred h--ccCCcEEEec
Q 028883 133 A--NSQILVIRVP 143 (202)
Q Consensus 133 ~--~T~~PVIgVP 143 (202)
- ....||+.+-
T Consensus 79 ~~~~~~ipvV~~~ 91 (276)
T 3ksm_A 79 QYRARNIPVLVVD 91 (276)
T ss_dssp HHHHTTCCEEEES
T ss_pred HHHHCCCcEEEEe
Confidence 3 3578999874
No 71
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=90.64 E-value=5.8 Score=32.03 Aligned_cols=81 Identities=6% Similarity=0.039 Sum_probs=51.5
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+...|+++. +.++- .+.+.+.+.+++.|+ ++.+...+..++ -.++++.+..++++-||........ + .+..
T Consensus 11 ~~~~Igvi~-~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~-~~~~~~~l~~~~vdgiIi~~~~~~~-~-~~~~ 84 (289)
T 3k9c_A 11 SSRLLGVVF-ELQQPFHGDLVEQIYAAATRRGY--DVMLSAVAPSRA-EKVAVQALMRERCEAAILLGTRFDT-D-ELGA 84 (289)
T ss_dssp --CEEEEEE-ETTCHHHHHHHHHHHHHHHHTTC--EEEEEEEBTTBC-HHHHHHHHTTTTEEEEEEETCCCCH-H-HHHH
T ss_pred CCCEEEEEE-ecCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHH-HHHHHHHHHhCCCCEEEEECCCCCH-H-HHHH
Confidence 346899999 55552 345566777788885 666666666666 6677778877888877776544332 2 2221
Q ss_pred -ccCCcEEEec
Q 028883 134 -NSQILVIRVP 143 (202)
Q Consensus 134 -~T~~PVIgVP 143 (202)
....|||-+=
T Consensus 85 ~~~~iPvV~i~ 95 (289)
T 3k9c_A 85 LADRVPALVVA 95 (289)
T ss_dssp HHTTSCEEEES
T ss_pred HHcCCCEEEEc
Confidence 1278988753
No 72
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=90.60 E-value=5.5 Score=31.75 Aligned_cols=88 Identities=9% Similarity=0.053 Sum_probs=60.9
Q ss_pred CCCeEEEEecCC-CC---HHHHHHHHHHHHHh-CCCeEEEEE-ccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh
Q 028883 57 DAPIVGIIMESD-LD---LPVMNDAARTLSDF-GVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 57 ~~~~V~IimGS~-SD---~~v~~~a~~~L~~~-gi~~ev~V~-SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv 130 (202)
+..+|++++-.. ++ ..+.+.+.+.+++. |....+... ..+..+++..++++.+..++++.||............
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~ 86 (304)
T 3gbv_A 7 KKYTFACLLPKHLEGEYWTDVQKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVPQYTKGF 86 (304)
T ss_dssp CCEEEEEEEECCCTTSHHHHHHHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSGGGTHHH
T ss_pred CcceEEEEecCCCCchHHHHHHHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCChHHHHHH
Confidence 446799988776 33 34455667777788 877777665 3567888888888888888899888776554444444
Q ss_pred hhh--ccCCcEEEecC
Q 028883 131 AAA--NSQILVIRVPL 144 (202)
Q Consensus 131 vA~--~T~~PVIgVP~ 144 (202)
+.- ....|||.+-.
T Consensus 87 ~~~~~~~~iPvV~~~~ 102 (304)
T 3gbv_A 87 TDALNELGIPYIYIDS 102 (304)
T ss_dssp HHHHHHHTCCEEEESS
T ss_pred HHHHHHCCCeEEEEeC
Confidence 433 34789987653
No 73
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=90.60 E-value=4.2 Score=32.75 Aligned_cols=82 Identities=5% Similarity=0.038 Sum_probs=54.0
Q ss_pred CCeEEEEecC-C---CC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh
Q 028883 58 APIVGIIMES-D---LD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 58 ~~~V~IimGS-~---SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv 130 (202)
...|++++-. . ++ ....+.+.+.+++.|. ++.+......+++..++++.+..++++.||........ ..
T Consensus 4 s~~Ig~i~~~~~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~--~~ 79 (287)
T 3bbl_A 4 SFMIGYSWTQTEPGQVNHILDQFLSSMVREAGAVNY--FVLPFPFSEDRSQIDIYRDLIRSGNVDGFVLSSINYND--PR 79 (287)
T ss_dssp CCEEEECCCCCCTTCSCCTHHHHHHHHHHHHHHTTC--EEEECCCCSSTTCCHHHHHHHHTTCCSEEEECSCCTTC--HH
T ss_pred eeEEEEEecccccccCChhHHHHHHHHHHHHHHcCC--EEEEEeCCCchHHHHHHHHHHHcCCCCEEEEeecCCCc--HH
Confidence 3578888765 3 33 4566777888888885 56666666677766777777777888877776543222 12
Q ss_pred hh--hccCCcEEEec
Q 028883 131 AA--ANSQILVIRVP 143 (202)
Q Consensus 131 vA--~~T~~PVIgVP 143 (202)
+. .....|||.+=
T Consensus 80 ~~~l~~~~iPvV~~~ 94 (287)
T 3bbl_A 80 VQFLLKQKFPFVAFG 94 (287)
T ss_dssp HHHHHHTTCCEEEES
T ss_pred HHHHHhcCCCEEEEC
Confidence 21 23578998763
No 74
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=90.55 E-value=3.3 Score=34.55 Aligned_cols=77 Identities=13% Similarity=0.106 Sum_probs=53.5
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+...|+++..+.+|- .+.+.+.+.+++.|. ++.+...+. +++..++++.+..++++-||.... +- -..
T Consensus 63 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~-~~~~~~~~~~l~~~~vdGiIi~~~----~~--~~~ 133 (333)
T 3jvd_A 63 RSALVGVIVPDLSNEYYSESLQTIQQDLKAAGY--QMLVAEANS-VQAQDVVMESLISIQAAGIIHVPV----VG--SIA 133 (333)
T ss_dssp -CCEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECCS-HHHHHHHHHHHHHHTCSEEEECCC----TT--CCC
T ss_pred CCCEEEEEeCCCcChHHHHHHHHHHHHHHHCCC--EEEEECCCC-hHHHHHHHHHHHhCCCCEEEEcch----HH--HHh
Confidence 446899999887763 456677778888885 666777777 888888888888888887776544 11 112
Q ss_pred ccCCcEEEe
Q 028883 134 NSQILVIRV 142 (202)
Q Consensus 134 ~T~~PVIgV 142 (202)
....|||-+
T Consensus 134 ~~~iPvV~~ 142 (333)
T 3jvd_A 134 PEGIPMVQL 142 (333)
T ss_dssp -CCSCEEEE
T ss_pred hCCCCEEEE
Confidence 346787765
No 75
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=90.53 E-value=0.57 Score=40.44 Aligned_cols=85 Identities=16% Similarity=0.103 Sum_probs=60.8
Q ss_pred CeEEEEecCCCC----HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhc
Q 028883 59 PIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 134 (202)
Q Consensus 59 ~~V~IimGS~SD----~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~ 134 (202)
.++.||.=..|. ....+++...|++.|+.+++.... .+....++++++..+++++||+ +|+.+.+--++.++
T Consensus 25 ~~i~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~---~~~~a~~~~~~~~~~~~d~vvv-~GGDGTv~~v~~~l 100 (337)
T 2qv7_A 25 KRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATE---KIGDATLEAERAMHENYDVLIA-AGGDGTLNEVVNGI 100 (337)
T ss_dssp EEEEEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECC---STTHHHHHHHHHTTTTCSEEEE-EECHHHHHHHHHHH
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEec---CcchHHHHHHHHhhcCCCEEEE-EcCchHHHHHHHHH
Confidence 457777644442 467789999999999877765432 3345667777776667776665 68888888888777
Q ss_pred ----cCCcEEEecCCCC
Q 028883 135 ----SQILVIRVPLLSE 147 (202)
Q Consensus 135 ----T~~PVIgVP~~~~ 147 (202)
+..|+..+|.-+.
T Consensus 101 ~~~~~~~pl~iIP~GT~ 117 (337)
T 2qv7_A 101 AEKPNRPKLGVIPMGTV 117 (337)
T ss_dssp TTCSSCCEEEEEECSSC
T ss_pred HhCCCCCcEEEecCCcH
Confidence 6789999998654
No 76
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=90.46 E-value=6 Score=31.96 Aligned_cols=84 Identities=18% Similarity=0.176 Sum_probs=59.9
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccC--CCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaH--Rtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
.+|++++.+.++- .+.+.+.+.++++|+ ++.+.... ..+++..++++.+..++++.||........+...+.-
T Consensus 4 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~ 81 (297)
T 3rot_A 4 DKYYLITHGSQDPYWTSLFQGAKKAAEELKV--DLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFSKSLQR 81 (297)
T ss_dssp CEEEEECSCCCSHHHHHHHHHHHHHHHHHTC--EEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHH
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHHhCc--EEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHH
Confidence 5799998877553 344556677788885 56666665 6889888999998888999888776666655555533
Q ss_pred --ccCCcEEEecC
Q 028883 134 --NSQILVIRVPL 144 (202)
Q Consensus 134 --~T~~PVIgVP~ 144 (202)
....|||.+=.
T Consensus 82 ~~~~giPvV~~~~ 94 (297)
T 3rot_A 82 ANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHTCCEEEESC
T ss_pred HHHCCCCEEEEcC
Confidence 35789987643
No 77
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=90.41 E-value=5.9 Score=31.80 Aligned_cols=81 Identities=10% Similarity=0.107 Sum_probs=54.7
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCc--Cchhhhh
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE--AHLSGVA 131 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a--a~Lpgvv 131 (202)
+...|++++...++ ....+.+.+.+++.|+ ++.+......+++..++++.+..++++-||...... ..+. .+
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~-~l 83 (285)
T 3c3k_A 7 KTGMLLVMVSNIANPFCAAVVKGIEKTAEKNGY--RILLCNTESDLARSRSCLTLLSGKMVDGVITMDALSELPELQ-NI 83 (285)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHTHHHHTTCCSEEEECCCGGGHHHHH-HH
T ss_pred CCCEEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCChHHHH-HH
Confidence 34689999976655 2455666777788885 555666777788878888888788888777765432 1222 12
Q ss_pred hhccCCcEEEe
Q 028883 132 AANSQILVIRV 142 (202)
Q Consensus 132 A~~T~~PVIgV 142 (202)
. ...||+.+
T Consensus 84 ~--~~iPvV~~ 92 (285)
T 3c3k_A 84 I--GAFPWVQC 92 (285)
T ss_dssp H--TTSSEEEE
T ss_pred h--cCCCEEEE
Confidence 2 67898876
No 78
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes}
Probab=90.37 E-value=1.2 Score=31.92 Aligned_cols=64 Identities=16% Similarity=0.165 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhh-------hhccCCcEEEec
Q 028883 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA-------AANSQILVIRVP 143 (202)
Q Consensus 74 ~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv-------A~~T~~PVIgVP 143 (202)
.+++.+.+++.|++++..+..- .| ...+.+.++ +++.||.++-+.+.+..++ .-+++.||+-||
T Consensus 68 l~~~~~~~~~~g~~~~~~v~~g--~~--~~~I~~~a~--~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVlvv~ 138 (138)
T 3idf_A 68 TQKFSTFFTEKGINPFVVIKEG--EP--VEMVLEEAK--DYNLLIIGSSENSFLNKIFASHQDDFIQKAPIPVLIVK 138 (138)
T ss_dssp HHHHHHHHHTTTCCCEEEEEES--CH--HHHHHHHHT--TCSEEEEECCTTSTTSSCCCCTTCHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHCCCCeEEEEecC--Ch--HHHHHHHHh--cCCEEEEeCCCcchHHHHhCcHHHHHHhcCCCCEEEeC
Confidence 3444555566799988777653 22 344444444 6898888876555554433 335678888776
No 79
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=90.35 E-value=3.3 Score=33.66 Aligned_cols=83 Identities=18% Similarity=0.159 Sum_probs=56.9
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh--
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-- 133 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~-- 133 (202)
.+|++++.+.++. ...+.+.+.+++.|+ ++.+......+++..++++.+..++++-||........+...+.-
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~l~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 80 (306)
T 2vk2_A 3 LTVGFSQVGSESGWRAAETNVAKSEAEKRGI--TLKIADGQQKQENQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAK 80 (306)
T ss_dssp CEEEEEECCCCSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHH
Confidence 4799999876652 344556778888986 556667777888888888888778888777765444333333332
Q ss_pred ccCCcEEEec
Q 028883 134 NSQILVIRVP 143 (202)
Q Consensus 134 ~T~~PVIgVP 143 (202)
....|||.+-
T Consensus 81 ~~~iPvV~~~ 90 (306)
T 2vk2_A 81 DAEIPVFLLD 90 (306)
T ss_dssp HTTCCEEEES
T ss_pred HCCCCEEEec
Confidence 3568998764
No 80
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=90.32 E-value=3.2 Score=33.32 Aligned_cols=84 Identities=10% Similarity=0.017 Sum_probs=58.1
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh--
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-- 133 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~-- 133 (202)
.+|++++-..++- ...+.+.+.+++.|. +++.+...+..+++..++++.+..++++.||............+.-
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~ 81 (309)
T 2fvy_A 3 TRIGVTIYKYDDNFMSVVRKAIEQDAKAAPD-VQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKAR 81 (309)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHTCTT-EEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSGGGHHHHHHHHH
T ss_pred cEEEEEeccCCcHHHHHHHHHHHHHHHhcCC-eEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcchhHHHHHHHH
Confidence 4789998766552 345566667777875 3777777788888888888888888898888765544444444432
Q ss_pred ccCCcEEEec
Q 028883 134 NSQILVIRVP 143 (202)
Q Consensus 134 ~T~~PVIgVP 143 (202)
....|||.+-
T Consensus 82 ~~~iPvV~~~ 91 (309)
T 2fvy_A 82 GQNVPVVFFN 91 (309)
T ss_dssp TTTCCEEEES
T ss_pred HCCCcEEEec
Confidence 3568998764
No 81
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=90.30 E-value=1.7 Score=32.80 Aligned_cols=68 Identities=15% Similarity=0.031 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh--------hhhhccCCcEEEe
Q 028883 73 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILVIRV 142 (202)
Q Consensus 73 v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg--------vvA~~T~~PVIgV 142 (202)
..+++.+.+++.|+++++.+.-.+-.| ...+++.+++.+++.||.++-+.+.+.. -+.-.++.||+-|
T Consensus 79 ~l~~~~~~~~~~g~~~~~~~~v~~G~~--~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~a~~PVLvV 154 (155)
T 3dlo_A 79 TLSWAVSIIRKEGAEGEEHLLVRGKEP--PDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILKANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESSSCH--HHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHhcCCCceEEEEecCCCH--HHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHhCCCCEEEe
Confidence 344556666778999887654444444 3456666666788988888765444332 2344678888765
No 82
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=90.09 E-value=6.3 Score=31.59 Aligned_cols=83 Identities=13% Similarity=0.101 Sum_probs=54.8
Q ss_pred CCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEE-ccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh-
Q 028883 58 APIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 132 (202)
Q Consensus 58 ~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~-SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA- 132 (202)
..+|+++....++ ....+.+.+.++++| |++.+. ..+..+++..++++.+..++++.||........+...+.
T Consensus 4 ~~~Ig~i~~~~~~~~~~~~~~g~~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiii~~~~~~~~~~~~~~ 81 (303)
T 3d02_A 4 EKTVVNISKVDGMPWFNRMGEGVVQAGKEFN--LNASQVGPSSTDAPQQVKIIEDLIARKVDAITIVPNDANVLEPVFKK 81 (303)
T ss_dssp CEEEEEECSCSSCHHHHHHHHHHHHHHHHTT--EEEEEECCSSSCHHHHHHHHHHHHHTTCSEEEECCSCHHHHHHHHHH
T ss_pred ceEEEEEeccCCChHHHHHHHHHHHHHHHcC--CEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHH
Confidence 3579999866555 234556667778887 466543 367788888888888888889988876554333322332
Q ss_pred -hccCCcEEEe
Q 028883 133 -ANSQILVIRV 142 (202)
Q Consensus 133 -~~T~~PVIgV 142 (202)
.....|||.+
T Consensus 82 ~~~~~ipvV~~ 92 (303)
T 3d02_A 82 ARDAGIVVLTN 92 (303)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCeEEEE
Confidence 2356899876
No 83
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=89.97 E-value=0.37 Score=32.31 Aligned_cols=78 Identities=12% Similarity=0.017 Sum_probs=48.0
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcE
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILV 139 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PV 139 (202)
.|.|.+.+ .=|.++++...|++.|++|++.-+..+..+....++.+.. | .. .-+....|+
T Consensus 5 ~v~ly~~~--~Cp~C~~~~~~L~~~~i~~~~~~vd~~~~~~~~~el~~~~---g---------~~------~~~~~~vP~ 64 (89)
T 3msz_A 5 KVKIYTRN--GCPYCVWAKQWFEENNIAFDETIIDDYAQRSKFYDEMNQS---G---------KV------IFPISTVPQ 64 (89)
T ss_dssp CEEEEECT--TCHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHHHHHHTT---T---------CC------SSCCCSSCE
T ss_pred EEEEEEcC--CChhHHHHHHHHHHcCCCceEEEeecCCChhHHHHHHHHh---C---------CC------CCCCCccCE
Confidence 35454433 4599999999999999999887776665555555554311 1 00 001256777
Q ss_pred EEecCCCCCCChhh-HHHhhc
Q 028883 140 IRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 140 IgVP~~~~~l~G~D-LlS~vq 159 (202)
|-+ .+..++|.| +...++
T Consensus 65 i~i--~g~~i~g~~~i~~~~~ 83 (89)
T 3msz_A 65 IFI--DDEHIGGFTELKANAD 83 (89)
T ss_dssp EEE--TTEEEESHHHHHHTHH
T ss_pred EEE--CCEEEeChHHHHHHHH
Confidence 754 444567777 666554
No 84
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=89.93 E-value=0.99 Score=33.24 Aligned_cols=74 Identities=7% Similarity=-0.061 Sum_probs=50.9
Q ss_pred CeEEEEecCC---CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc
Q 028883 59 PIVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 135 (202)
Q Consensus 59 ~~V~IimGS~---SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T 135 (202)
..|.|.|-++ +.=|.+.+|.+.|++.|++|+..=+.. .|+...++.+ ..+..
T Consensus 16 ~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~--d~~~~~~l~~-----------------------~~g~~ 70 (111)
T 3zyw_A 16 APCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS--DEEVRQGLKA-----------------------YSSWP 70 (111)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG--CHHHHHHHHH-----------------------HHTCC
T ss_pred CCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC--CHHHHHHHHH-----------------------HHCCC
Confidence 4688888655 667999999999999999988653333 3443333322 12457
Q ss_pred CCcEEEecCCCCCCChhh-HHHhhc
Q 028883 136 QILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 136 ~~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
+.|+|=+ .+...+|.| |..+.+
T Consensus 71 tvP~ifi--~g~~iGG~d~l~~l~~ 93 (111)
T 3zyw_A 71 TYPQLYV--SGELIGGLDIIKELEA 93 (111)
T ss_dssp SSCEEEE--TTEEEECHHHHHHHHH
T ss_pred CCCEEEE--CCEEEecHHHHHHHHH
Confidence 7888853 455678888 887776
No 85
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=89.87 E-value=6.5 Score=31.40 Aligned_cols=83 Identities=13% Similarity=0.113 Sum_probs=56.1
Q ss_pred CeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh--h
Q 028883 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--A 133 (202)
Q Consensus 59 ~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA--~ 133 (202)
.+|+++....+| ..+.+.+.+.+++.|+ ++.+....-.+++..++++.+..++++.||........+...+. .
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~ 80 (290)
T 2fn9_A 3 GKMAIVISTLNNPWFVVLAETAKQRAEQLGY--EATIFDSQNDTAKESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAK 80 (290)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHH
T ss_pred eEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHH
Confidence 478999876555 2345566677788886 55666677778888888888877888887776554444333332 2
Q ss_pred ccCCcEEEec
Q 028883 134 NSQILVIRVP 143 (202)
Q Consensus 134 ~T~~PVIgVP 143 (202)
....|||.+-
T Consensus 81 ~~~iPvV~~~ 90 (290)
T 2fn9_A 81 EAGIPVFCVD 90 (290)
T ss_dssp HTTCCEEEES
T ss_pred HCCCeEEEEe
Confidence 3568998763
No 86
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=89.85 E-value=2.5 Score=31.59 Aligned_cols=69 Identities=13% Similarity=0.041 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCCeEE--EEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh--------hhhhccCCcEEEec
Q 028883 74 MNDAARTLSDFGVPYEI--KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILVIRVP 143 (202)
Q Consensus 74 ~~~a~~~L~~~gi~~ev--~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg--------vvA~~T~~PVIgVP 143 (202)
++++.+.++..|++++. .+..- +-...+++.+++.+++.||.++-+...+.. -+.-+++.||+-||
T Consensus 80 l~~~~~~~~~~g~~~~~~~~~~~g----~~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~~~PVlvv~ 155 (170)
T 2dum_A 80 LQEKAEEVKRAFRAKNVRTIIRFG----IPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKTKKPVLIIK 155 (170)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEEEE----CHHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHCSSCEEEEC
T ss_pred HHHHHHHHHHcCCceeeeeEEecC----ChHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhCCCCEEEEc
Confidence 34445555567999887 66532 233455555666778888887765544432 23456899999999
Q ss_pred CCC
Q 028883 144 LLS 146 (202)
Q Consensus 144 ~~~ 146 (202)
...
T Consensus 156 ~~~ 158 (170)
T 2dum_A 156 EVD 158 (170)
T ss_dssp CCC
T ss_pred cCC
Confidence 764
No 87
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=89.76 E-value=6.6 Score=31.40 Aligned_cols=79 Identities=9% Similarity=0.131 Sum_probs=52.1
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC--chhhhhh
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA--HLSGVAA 132 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa--~LpgvvA 132 (202)
...|++++.. ++- ...+.+.+.+++.|+ ++.+......+++..++++.+..++++.||....... .+--.
T Consensus 8 ~~~Igvi~~~-~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~l-- 82 (288)
T 2qu7_A 8 SNIIAFIVPD-QNPFFTEVLTEISHECQKHHL--HVAVASSEENEDKQQDLIETFVSQNVSAIILVPVKSKFQMKREW-- 82 (288)
T ss_dssp EEEEEEEESS-CCHHHHHHHHHHHHHHGGGTC--EEEEEECTTCHHHHHHHHHHHHHTTEEEEEECCSSSCCCCCGGG--
T ss_pred CCEEEEEECC-CCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHHcCccEEEEecCCCChHHHHHh--
Confidence 3579999987 442 344555666677776 5556666778888888888887888887777654322 22211
Q ss_pred hccCCcEEEec
Q 028883 133 ANSQILVIRVP 143 (202)
Q Consensus 133 ~~T~~PVIgVP 143 (202)
...|||.+-
T Consensus 83 --~~iPvV~~~ 91 (288)
T 2qu7_A 83 --LKIPIMTLD 91 (288)
T ss_dssp --GGSCEEEES
T ss_pred --cCCCEEEEe
Confidence 567888764
No 88
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=89.73 E-value=5.4 Score=33.47 Aligned_cols=82 Identities=16% Similarity=0.191 Sum_probs=51.9
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh--
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA-- 132 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA-- 132 (202)
...|+++....++- .+.+.+.+.+++.|.. +.+...+..+++..++++.+..++++-||....... ...+.
T Consensus 66 s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~~--~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~--~~~~~~l 141 (348)
T 3bil_A 66 SNTIGVIVPSLINHYFAAMVTEIQSTASKAGLA--TIITNSNEDATTMSGSLEFLTSHGVDGIICVPNEEC--ANQLEDL 141 (348)
T ss_dssp --CEEEEESCSSSHHHHHHHHHHHHHHHHTTCC--EEEEECTTCHHHHHHHHHHHHHTTCSCEEECCCGGG--HHHHHHH
T ss_pred CCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCCE--EEEEeCCCCHHHHHHHHHHHHhCCCCEEEEeCCCCC--hHHHHHH
Confidence 35799999766552 4556667777888865 555666777887788888887888886666543322 12222
Q ss_pred hccCCcEEEec
Q 028883 133 ANSQILVIRVP 143 (202)
Q Consensus 133 ~~T~~PVIgVP 143 (202)
.....||+.+=
T Consensus 142 ~~~~iPvV~i~ 152 (348)
T 3bil_A 142 QKQGMPVVLVD 152 (348)
T ss_dssp HHC-CCEEEES
T ss_pred HhCCCCEEEEc
Confidence 23568888763
No 89
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=89.66 E-value=4.4 Score=32.56 Aligned_cols=82 Identities=17% Similarity=0.148 Sum_probs=58.6
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhh--hh
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--AA 133 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv--A~ 133 (202)
.+|+++.-+.++- .+.+.+.+.++++|+ ++.+... ..+++..++++++..++++.||............+ +.
T Consensus 3 ~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~ 79 (306)
T 8abp_A 3 LKLGFLVKQPEEPWFQTEWKFADKAGKDLGF--EVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKAR 79 (306)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHHTE--EEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHH
T ss_pred eEEEEEeCCCCchHHHHHHHHHHHHHHHcCC--EEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHH
Confidence 4789998877663 445566777788885 5566666 48888888899888888998887766555555543 23
Q ss_pred ccCCcEEEec
Q 028883 134 NSQILVIRVP 143 (202)
Q Consensus 134 ~T~~PVIgVP 143 (202)
....|||.+=
T Consensus 80 ~~~iPvV~~~ 89 (306)
T 8abp_A 80 GYDMKVIAVD 89 (306)
T ss_dssp HTTCEEEEES
T ss_pred HCCCcEEEeC
Confidence 4578998764
No 90
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=89.41 E-value=7.3 Score=31.34 Aligned_cols=84 Identities=8% Similarity=0.002 Sum_probs=58.6
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEE-EccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh-
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKI-LPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 133 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V-~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~- 133 (202)
.+|+++.-+.++- ...+.+.+.++++|+ ++.+ ...+..+++..++++.+..++++.||........+...+.-
T Consensus 5 ~~I~~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~ 82 (305)
T 3g1w_A 5 ETYMMITFQSGMDYWKRCLKGFEDAAQALNV--TVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPVELTDTINKA 82 (305)
T ss_dssp CEEEEEESSTTSTHHHHHHHHHHHHHHHHTC--EEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHH
T ss_pred ceEEEEEccCCChHHHHHHHHHHHHHHHcCC--EEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHH
Confidence 5788888766552 344566677788886 4555 46788899999999988888899888766555555444433
Q ss_pred -ccCCcEEEecC
Q 028883 134 -NSQILVIRVPL 144 (202)
Q Consensus 134 -~T~~PVIgVP~ 144 (202)
....|||.+-.
T Consensus 83 ~~~~iPvV~~~~ 94 (305)
T 3g1w_A 83 VDAGIPIVLFDS 94 (305)
T ss_dssp HHTTCCEEEESS
T ss_pred HHCCCcEEEECC
Confidence 35789987643
No 91
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=89.17 E-value=8.6 Score=31.85 Aligned_cols=82 Identities=12% Similarity=0.132 Sum_probs=58.1
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhh--
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA-- 131 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv-- 131 (202)
+...|+++..+.++ ..+.+.+.+.+++.|. ++.+...+..+++..++++.+..++++-||........ ..+
T Consensus 61 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~~~~~--~~~~~ 136 (339)
T 3h5o_A 61 KSRTVLVLIPSLANTVFLETLTGIETVLDAAGY--QMLIGNSHYDAGQELQLLRAYLQHRPDGVLITGLSHAE--PFERI 136 (339)
T ss_dssp --CEEEEEESCSTTCTTHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHTTCCSEEEEECSCCCT--THHHH
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHcCCCCEEEEeCCCCCH--HHHHH
Confidence 34679999877665 5677888888899885 66778888899999999999888888866655432221 222
Q ss_pred hhccCCcEEEe
Q 028883 132 AANSQILVIRV 142 (202)
Q Consensus 132 A~~T~~PVIgV 142 (202)
......||+-+
T Consensus 137 l~~~~iPvV~~ 147 (339)
T 3h5o_A 137 LSQHALPVVYM 147 (339)
T ss_dssp HHHTTCCEEEE
T ss_pred HhcCCCCEEEE
Confidence 23457899876
No 92
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=89.15 E-value=1 Score=32.59 Aligned_cols=65 Identities=11% Similarity=0.078 Sum_probs=41.2
Q ss_pred HHHHHHHHHhCC-CeEEEEEccCCCchHHHHHHH-HHhhcCceEEEEecCCcCchhhh--------hhhccCCcEEEec
Q 028883 75 NDAARTLSDFGV-PYEIKILPPHQNCKEALSYAL-SAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVP 143 (202)
Q Consensus 75 ~~a~~~L~~~gi-~~ev~V~SaHRtp~~l~~~~~-~~~~~g~~ViIa~AG~aa~Lpgv--------vA~~T~~PVIgVP 143 (202)
+++.+.+++.|+ +++..+..- +-..++++ .+++.+++.||.++-+.+.+... +.-+++.||+-||
T Consensus 72 ~~~~~~~~~~g~~~~~~~~~~g----~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlvV~ 146 (146)
T 3s3t_A 72 RQRQQFVATTSAPNLKTEISYG----IPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAPCNVIVIR 146 (146)
T ss_dssp HHHHHHHTTSSCCCCEEEEEEE----CHHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCSSEEEEEC
T ss_pred HHHHHHHHhcCCcceEEEEecC----ChHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCCCCEEEeC
Confidence 344445556788 888776543 23445666 56667899888887655544432 3346788998776
No 93
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=89.11 E-value=7.7 Score=31.26 Aligned_cols=83 Identities=13% Similarity=0.144 Sum_probs=55.0
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh-
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA- 132 (202)
+...|++++-..+| ..+.+.+.+.+++.|. ++.+......+++..++++.+..++++-||....... ...+.
T Consensus 15 ~s~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~--~~~~~~ 90 (289)
T 2fep_A 15 KTTTVGVIIPDISSIFYSELARGIEDIATMYKY--NIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNIT--DEHVAE 90 (289)
T ss_dssp -CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCCC--HHHHHH
T ss_pred CCCeEEEEeCCCCCchHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCCC--HHHHHH
Confidence 34689999976555 2455666777788886 5566677778888888888888888987776553221 12222
Q ss_pred -hccCCcEEEec
Q 028883 133 -ANSQILVIRVP 143 (202)
Q Consensus 133 -~~T~~PVIgVP 143 (202)
.....|||.+-
T Consensus 91 l~~~~iPvV~~~ 102 (289)
T 2fep_A 91 FKRSPVPIVLAA 102 (289)
T ss_dssp HHHSSSCEEEES
T ss_pred HHhcCCCEEEEc
Confidence 23568998763
No 94
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=89.01 E-value=8.6 Score=31.64 Aligned_cols=84 Identities=17% Similarity=0.214 Sum_probs=54.5
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHh-CCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDF-GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~-gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA 132 (202)
+...|++++.. +|- .+.+.+.+.+++. |+ ++.+...+..++...++++.+..++++.||........+...+.
T Consensus 5 ~~~~Igvi~~~-~~~~~~~~~~gi~~~a~~~~g~--~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~ 81 (325)
T 2x7x_A 5 PHFRIGVAQCS-DDSWRHKMNDEILREAMFYNGV--SVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISANEAAPMTPIVE 81 (325)
T ss_dssp -CCEEEEEESC-CSHHHHHHHHHHHHHHTTSSSC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSHHHHHHHHH
T ss_pred CCeEEEEEecC-CCHHHHHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHH
Confidence 34689999977 442 2334455556666 65 66677777888888888888888889888876544333333332
Q ss_pred h--ccCCcEEEec
Q 028883 133 A--NSQILVIRVP 143 (202)
Q Consensus 133 ~--~T~~PVIgVP 143 (202)
- ....|||.+-
T Consensus 82 ~~~~~~iPvV~~~ 94 (325)
T 2x7x_A 82 EAYQKGIPVILVD 94 (325)
T ss_dssp HHHHTTCCEEEES
T ss_pred HHHHCCCeEEEeC
Confidence 2 3568998873
No 95
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=88.72 E-value=6 Score=32.23 Aligned_cols=86 Identities=21% Similarity=0.245 Sum_probs=60.9
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+..+|++++-+.++- ...+.+.+.++++|+ ++.+...+..+++-.++++.+..++++.||...-........+.-
T Consensus 2 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~ 79 (330)
T 3uug_A 2 DKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGY--KTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQ 79 (330)
T ss_dssp CCCEEEEEECCSSSTHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHH
T ss_pred CCcEEEEEeCCCcchHHHHHHHHHHHHHHHcCC--EEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHH
Confidence 346899999877652 344556677788886 666777888999988999988888899888766554444444432
Q ss_pred --ccCCcEEEecC
Q 028883 134 --NSQILVIRVPL 144 (202)
Q Consensus 134 --~T~~PVIgVP~ 144 (202)
....|||.+=.
T Consensus 80 ~~~~giPvV~~~~ 92 (330)
T 3uug_A 80 AGEQGIKVIAYDR 92 (330)
T ss_dssp HHHTTCEEEEESS
T ss_pred HHHCCCCEEEECC
Confidence 35689987643
No 96
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=88.56 E-value=9.2 Score=31.41 Aligned_cols=76 Identities=13% Similarity=0.167 Sum_probs=42.8
Q ss_pred ceEEEEecCCcCchhhhhhhccCCcEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecCChhh--HHHHHHHHHccCCH
Q 028883 114 IKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKN--AALYAVKVLGIADE 190 (202)
Q Consensus 114 ~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~n~~N--AAl~Aa~IL~~~d~ 190 (202)
++++|.-+| .+.-+=|...-+|||..|..+...+-.. .--+++ .|. +.+ -...+ +.-+|..|..+ |+
T Consensus 255 ad~~v~~sg---~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~--~g~--g~~--~~~~d~~~~~la~~i~~l-~~ 324 (364)
T 1f0k_A 255 ADVVVCRSG---ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEK--AGA--AKI--IEQPQLSVDAVANTLAGW-SR 324 (364)
T ss_dssp CSEEEECCC---HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHH--TTS--EEE--CCGGGCCHHHHHHHHHTC-CH
T ss_pred CCEEEECCc---hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHh--CCc--EEE--eccccCCHHHHHHHHHhc-CH
Confidence 467777665 2222335557899999887542111011 112233 343 222 23334 77778888888 99
Q ss_pred HHHHHHHHH
Q 028883 191 DLLERIRKY 199 (202)
Q Consensus 191 ~l~~kl~~~ 199 (202)
+.++++.+.
T Consensus 325 ~~~~~~~~~ 333 (364)
T 1f0k_A 325 ETLLTMAER 333 (364)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 998887553
No 97
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=88.29 E-value=8.3 Score=31.42 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=53.1
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhh--------hhccCCcEEE
Q 028883 70 DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--------AANSQILVIR 141 (202)
Q Consensus 70 D~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv--------A~~T~~PVIg 141 (202)
.....+++.+.|++.|++++..+..- +-...+.+.+++.+++.+|.++-+-+.+...+ ...++.||+-
T Consensus 212 ~~~~l~~~~~~l~~~~~~~~~~~~~g----~~~~~I~~~a~~~~~dLlV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pvLv 287 (294)
T 3loq_A 212 KTADLRVMEEVIGAEGIEVHVHIESG----TPHKAILAKREEINATTIFMGSRGAGSVMTMILGSTSESVIRRSPVPVFV 287 (294)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEECS----CHHHHHHHHHHHTTCSEEEEECCCCSCHHHHHHHCHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEecC----CHHHHHHHHHHhcCcCEEEEeCCCCCCccceeeCcHHHHHHhcCCCCEEE
Confidence 56788888889999999988777543 33445555566677898888887777665543 3467899999
Q ss_pred ecCCC
Q 028883 142 VPLLS 146 (202)
Q Consensus 142 VP~~~ 146 (202)
||...
T Consensus 288 v~~~~ 292 (294)
T 3loq_A 288 CKRGD 292 (294)
T ss_dssp ECSCT
T ss_pred ECCCC
Confidence 98754
No 98
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=88.28 E-value=8.1 Score=30.45 Aligned_cols=80 Identities=9% Similarity=0.064 Sum_probs=52.8
Q ss_pred CeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh--h
Q 028883 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--A 133 (202)
Q Consensus 59 ~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA--~ 133 (202)
..|+++....+| ....+.+.+.+++.|+ ++.+......+++..++++.+..++++.||....... ...+. .
T Consensus 4 ~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~--~~~~~~l~ 79 (275)
T 3d8u_A 4 YSIALIIPSLFEKACAHFLPSFQQALNKAGY--QLLLGYSDYSIEQEEKLLSTFLESRPAGVVLFGSEHS--QRTHQLLE 79 (275)
T ss_dssp CEEEEEESCSSCHHHHHHHHHHHHHHHHTSC--EECCEECTTCHHHHHHHHHHHHTSCCCCEEEESSCCC--HHHHHHHH
T ss_pred eEEEEEeCCCccccHHHHHHHHHHHHHHCCC--EEEEEcCCCCHHHHHHHHHHHHhcCCCEEEEeCCCCC--HHHHHHHH
Confidence 579999876655 2445566777788886 5555666777888888888888888886665543322 12222 2
Q ss_pred ccCCcEEEe
Q 028883 134 NSQILVIRV 142 (202)
Q Consensus 134 ~T~~PVIgV 142 (202)
....||+.+
T Consensus 80 ~~~iPvV~~ 88 (275)
T 3d8u_A 80 ASNTPVLEI 88 (275)
T ss_dssp HHTCCEEEE
T ss_pred hCCCCEEEE
Confidence 357899876
No 99
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=88.23 E-value=2.1 Score=32.25 Aligned_cols=69 Identities=13% Similarity=0.092 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh--------hhhccCCcEEEecCC
Q 028883 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVPLL 145 (202)
Q Consensus 74 ~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv--------vA~~T~~PVIgVP~~ 145 (202)
++++.+.++..|++++..+..- .| ...+++.+++.+++.||.++-+.+.+..+ +.-+++.||+-||..
T Consensus 89 l~~~~~~~~~~g~~~~~~v~~G--~~--~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~~pVlvv~~~ 164 (175)
T 2gm3_A 89 LEFFVNKCHEIGVGCEAWIKTG--DP--KDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKRN 164 (175)
T ss_dssp HHHHHHHHHHHTCEEEEEEEES--CH--HHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCSSCEEEEECC
T ss_pred HHHHHHHHHHCCCceEEEEecC--CH--HHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCCCCEEEEcCC
Confidence 3444455566799888776642 23 44556666666788888777655544332 344678999999975
Q ss_pred C
Q 028883 146 S 146 (202)
Q Consensus 146 ~ 146 (202)
.
T Consensus 165 ~ 165 (175)
T 2gm3_A 165 A 165 (175)
T ss_dssp G
T ss_pred c
Confidence 3
No 100
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=88.16 E-value=8.5 Score=30.55 Aligned_cols=83 Identities=14% Similarity=0.110 Sum_probs=59.9
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC---chhhhhh
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA---HLSGVAA 132 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa---~LpgvvA 132 (202)
..|+++..+.+|- .+.+.+.+.+++.|+ ++.+...+..+++..++++.+..++++-||....... .....+.
T Consensus 16 ~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 93 (298)
T 3tb6_A 16 KTIGVLTTYISDYIFPSIIRGIESYLSEQGY--SMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYL 93 (298)
T ss_dssp CEEEEEESCSSSTTHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHH
T ss_pred ceEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCcHHHHH
Confidence 6899999887763 566777788888886 6677788888999889999988889988877654332 2223332
Q ss_pred --hccCCcEEEec
Q 028883 133 --ANSQILVIRVP 143 (202)
Q Consensus 133 --~~T~~PVIgVP 143 (202)
.....|||.+=
T Consensus 94 ~~~~~~iPvV~~~ 106 (298)
T 3tb6_A 94 NLEKNGIPFAMIN 106 (298)
T ss_dssp HHHHTTCCEEEES
T ss_pred HHHhcCCCEEEEe
Confidence 23578998763
No 101
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=88.07 E-value=8.6 Score=30.49 Aligned_cols=83 Identities=8% Similarity=0.077 Sum_probs=54.7
Q ss_pred CCCeEEEEecC--CCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhh
Q 028883 57 DAPIVGIIMES--DLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA 131 (202)
Q Consensus 57 ~~~~V~IimGS--~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv 131 (202)
+..+|++++.. .++ ....+.+.+.+++.|+ ++.+......+++..++++.+..++++.||........ ..+
T Consensus 18 ~~~~Ig~i~~~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgii~~~~~~~~--~~~ 93 (296)
T 3brq_A 18 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGR--QLLLADGKHSAEEERQAIQYLLDLRCDAIMIYPRFLSV--DEI 93 (296)
T ss_dssp -CCEEEEEECGGGCC--CHHHHHHHHHHHHHHTTC--EEEEECCTTSHHHHHHHHHHHHHTTCSEEEEECSSSCH--HHH
T ss_pred CCceEEEEeCCcccCCchHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEecCCCCh--HHH
Confidence 34689999876 333 2456667777888886 56667777788888888888877888877776543221 222
Q ss_pred h--hc-cCCcEEEec
Q 028883 132 A--AN-SQILVIRVP 143 (202)
Q Consensus 132 A--~~-T~~PVIgVP 143 (202)
. .. ...|||.+-
T Consensus 94 ~~l~~~~~iPvV~~~ 108 (296)
T 3brq_A 94 DDIIDAHSQPIMVLN 108 (296)
T ss_dssp HHHHHTCSSCEEEES
T ss_pred HHHHhcCCCCEEEEc
Confidence 1 22 578988763
No 102
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=87.90 E-value=11 Score=31.50 Aligned_cols=82 Identities=10% Similarity=0.127 Sum_probs=56.6
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh-
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA- 132 (202)
+...|++++.+.++- .+.+.+.+.+++.|+ ++.+...+..+++..++++.+..++++-||........ ..+.
T Consensus 69 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdGiI~~~~~~~~--~~~~~ 144 (355)
T 3e3m_A 69 RSGFVGLLLPSLNNLHFAQTAQSLTDVLEQGGL--QLLLGYTAYSPEREEQLVETMLRRRPEAMVLSYDGHTE--QTIRL 144 (355)
T ss_dssp --CEEEEEESCSBCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTCCSEEEEECSCCCH--HHHHH
T ss_pred CCCEEEEEeCCCCchHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEEEeCCCCCH--HHHHH
Confidence 346899999887764 345566777778875 66777888899998899988888888866665433221 2222
Q ss_pred -hccCCcEEEe
Q 028883 133 -ANSQILVIRV 142 (202)
Q Consensus 133 -~~T~~PVIgV 142 (202)
.....||+-+
T Consensus 145 l~~~~iPvV~i 155 (355)
T 3e3m_A 145 LQRASIPIVEI 155 (355)
T ss_dssp HHHCCSCEEEE
T ss_pred HHhCCCCEEEE
Confidence 2457899876
No 103
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=87.63 E-value=8.1 Score=30.97 Aligned_cols=83 Identities=13% Similarity=0.124 Sum_probs=43.1
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEE-ccCCCchHHHHHHHHHhhcCceEEEEecCC-cC-chhhh
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKIL-PPHQNCKEALSYALSAKERGIKIIIVGDGV-EA-HLSGV 130 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~-SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~-aa-~Lpgv 130 (202)
+..+|++++...+| ....+.+.+.+++.|+ ++.+. .....+++..++++.+..++++.||..... .. .+.-
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~- 83 (290)
T 3clk_A 7 SSNVIAAVVSSVRTNFAQQILDGIQEEAHKNGY--NLIIVYSGSADPEEQKHALLTAIERPVMGILLLSIALTDDNLQL- 83 (290)
T ss_dssp -CCEEEEECCCCSSSHHHHHHHHHHHHHHTTTC--EEEEEC----------CHHHHHHSSCCSEEEEESCC----CHHH-
T ss_pred cCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--eEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEecccCCHHHHHH-
Confidence 34689999875544 2455666777778885 56666 555666666677777777888877765433 22 2221
Q ss_pred hhhccCCcEEEec
Q 028883 131 AAANSQILVIRVP 143 (202)
Q Consensus 131 vA~~T~~PVIgVP 143 (202)
+ .....||+.+-
T Consensus 84 l-~~~~iPvV~~~ 95 (290)
T 3clk_A 84 L-QSSDVPYCFLS 95 (290)
T ss_dssp H-HCC--CEEEES
T ss_pred H-HhCCCCEEEEc
Confidence 1 23567888763
No 104
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=87.48 E-value=9.5 Score=30.33 Aligned_cols=82 Identities=16% Similarity=0.315 Sum_probs=55.8
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh--h
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--A 133 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA--~ 133 (202)
..|++++.+.++- .+.+.+.+.+++.| |++.+...+..+++-.++++.+..++++-||........+...+. .
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g--~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 79 (271)
T 2dri_A 2 DTIALVVSTLNNPFFVSLKDGAQKEADKLG--YNLVVLDSQNNPAKELANVQDLTVRGTKILLINPTDSDAVGNAVKMAN 79 (271)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHT--CEEEEEECTTCHHHHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHH
T ss_pred cEEEEEecCCCCHHHHHHHHHHHHHHHHcC--cEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHH
Confidence 4789998776653 45566677788888 466677777778877788888888888877775544443323332 2
Q ss_pred ccCCcEEEe
Q 028883 134 NSQILVIRV 142 (202)
Q Consensus 134 ~T~~PVIgV 142 (202)
....||+-+
T Consensus 80 ~~~iPvV~i 88 (271)
T 2dri_A 80 QANIPVITL 88 (271)
T ss_dssp HTTCCEEEE
T ss_pred HCCCcEEEe
Confidence 346898876
No 105
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=87.45 E-value=11 Score=31.14 Aligned_cols=84 Identities=10% Similarity=0.125 Sum_probs=55.7
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCc-Cchhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE-AHLSGVAA 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a-a~LpgvvA 132 (202)
+...|++++...++- .+.+.+.+.+++.|. ++.+...+..+++..++++.+..++++-||...... ..+-..+.
T Consensus 57 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~l~ 134 (340)
T 1qpz_A 57 HTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGY--TLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLE 134 (340)
T ss_dssp CCSEEEEEESCSCSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSCCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCChHHHHHHHHHHHHHHHcCC--EEEEEeCCCCHHHHHHHHHHHHcCCCCEEEEeCCCCChHHHHHHH
Confidence 346899999766552 345566777778885 566677777888888888888788888777654332 22323333
Q ss_pred hccCCcEEEe
Q 028883 133 ANSQILVIRV 142 (202)
Q Consensus 133 ~~T~~PVIgV 142 (202)
.....||+.+
T Consensus 135 ~~~~iPvV~~ 144 (340)
T 1qpz_A 135 EYRHIPMVVM 144 (340)
T ss_dssp TTTTSCEEEE
T ss_pred hhCCCCEEEE
Confidence 2346788865
No 106
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=87.39 E-value=2.1 Score=29.31 Aligned_cols=64 Identities=13% Similarity=0.088 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEccC---CCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc-----CCcEEE
Q 028883 70 DLPVMNDAARTLSDFGVPYEIKILPPH---QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS-----QILVIR 141 (202)
Q Consensus 70 D~~v~~~a~~~L~~~gi~~ev~V~SaH---Rtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T-----~~PVIg 141 (202)
-=|.+.+|.+.|++.|++|+..=+..+ ..++...++.+.. +.. ..|+|=
T Consensus 13 ~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~-----------------------g~~~~~~~tvP~v~ 69 (87)
T 1aba_A 13 KCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKL-----------------------GRDTQIGLTMPQVF 69 (87)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHH-----------------------TCSCCTTCCSCEEE
T ss_pred cCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHh-----------------------CCCCCCCCccCEEE
Confidence 458999999999999999986555432 3455545554321 223 788886
Q ss_pred ecCCCCCCChhh-HHHh
Q 028883 142 VPLLSEDWSEDD-VINS 157 (202)
Q Consensus 142 VP~~~~~l~G~D-LlS~ 157 (202)
++ .+..++|.| |..+
T Consensus 70 i~-~g~~igG~d~l~~~ 85 (87)
T 1aba_A 70 AP-DGSHIGGFDQLREY 85 (87)
T ss_dssp CT-TSCEEESHHHHHHH
T ss_pred EE-CCEEEeCHHHHHHh
Confidence 53 445578888 7654
No 107
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=86.83 E-value=8 Score=31.15 Aligned_cols=82 Identities=11% Similarity=0.147 Sum_probs=54.9
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEc--cCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILP--PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~S--aHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
..|+++.-+.++- .+.+.+.+.+++.|+ ++.+.. .+..+++..++++.+..++++-||........+...+..
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~~~ 79 (288)
T 1gud_A 2 AEYAVVLKTLSNPFWVDMKKGIEDEAKTLGV--SVDIFASPSEGDFQSQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVAR 79 (288)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--CEEEEECSSTTCHHHHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHH
T ss_pred cEEEEEeCCCCchHHHHHHHHHHHHHHHcCC--EEEEeCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHH
Confidence 3688888766553 344566777888995 556666 677888888888888788888777765544443333332
Q ss_pred --ccCCcEEEe
Q 028883 134 --NSQILVIRV 142 (202)
Q Consensus 134 --~T~~PVIgV 142 (202)
....|||-+
T Consensus 80 ~~~~~iPvV~~ 90 (288)
T 1gud_A 80 AWKKGIYLVNL 90 (288)
T ss_dssp HHHTTCEEEEE
T ss_pred HHHCCCeEEEE
Confidence 246898876
No 108
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=86.58 E-value=12 Score=30.71 Aligned_cols=83 Identities=14% Similarity=0.146 Sum_probs=53.0
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+...|+++....++ ....+.+.+.+++.|. ++.+...+..+++..++++.+..++++-||........ ..+.-
T Consensus 59 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~--~~~~~ 134 (332)
T 2hsg_A 59 KTTTVGVIIPDISNIFYAELARGIEDIATMYKY--NIILSNSDQNQDKELHLLNNMLGKQVDGIIFMSGNVTE--EHVEE 134 (332)
T ss_dssp -CCEEEEEEC--CCSHHHHHHHHHHHHHHHHTC--EEEEEECCSHHHHHHHHHHHTSCCSSCCEEECCSSCCH--HHHHH
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEeCCCChHHHHHHHHHHHhCCCcEEEEecCCCCH--HHHHH
Confidence 44689999876554 3456677778888886 55566666677777788888877888877765433221 22222
Q ss_pred --ccCCcEEEec
Q 028883 134 --NSQILVIRVP 143 (202)
Q Consensus 134 --~T~~PVIgVP 143 (202)
....||+.+-
T Consensus 135 l~~~~iPvV~~~ 146 (332)
T 2hsg_A 135 LKKSPVPVVLAA 146 (332)
T ss_dssp HTTSSSCEEEES
T ss_pred HHhCCCCEEEEc
Confidence 3568888763
No 109
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=86.41 E-value=10 Score=30.29 Aligned_cols=82 Identities=12% Similarity=0.255 Sum_probs=54.6
Q ss_pred CeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh--
Q 028883 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-- 133 (202)
Q Consensus 59 ~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~-- 133 (202)
..|+++....++ ....+.+.+.+++.|+ ++.+......+++-.++++.+..++++-||........+...+..
T Consensus 2 ~~Igvi~~~~~~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~ 79 (283)
T 2ioy_A 2 KTIGLVISTLNNPFFVTLKNGAEEKAKELGY--KIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEAN 79 (283)
T ss_dssp CEEEEEESCSSSHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHH
T ss_pred eEEEEEecCCCCHHHHHHHHHHHHHHHhcCc--EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCchhhhHHHHHHHH
Confidence 368888876666 2455666777888886 566667777787777788888778888777655443433233322
Q ss_pred ccCCcEEEe
Q 028883 134 NSQILVIRV 142 (202)
Q Consensus 134 ~T~~PVIgV 142 (202)
....|||-+
T Consensus 80 ~~~iPvV~~ 88 (283)
T 2ioy_A 80 SKNIPVITI 88 (283)
T ss_dssp HTTCCEEEE
T ss_pred HCCCeEEEe
Confidence 356898876
No 110
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=85.64 E-value=5.5 Score=29.20 Aligned_cols=67 Identities=16% Similarity=0.067 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhCC-CeEEEEEccCCCchHHHHHHHH-HhhcCceEEEEecCCcCch-------hhhhhhccCCcEEEec
Q 028883 74 MNDAARTLSDFGV-PYEIKILPPHQNCKEALSYALS-AKERGIKIIIVGDGVEAHL-------SGVAAANSQILVIRVP 143 (202)
Q Consensus 74 ~~~a~~~L~~~gi-~~ev~V~SaHRtp~~l~~~~~~-~~~~g~~ViIa~AG~aa~L-------pgvvA~~T~~PVIgVP 143 (202)
++++.+.+++.|+ +++..+...... ..++++. +++.+++.||.++-+-..+ +.-+.-+++.||+-||
T Consensus 81 l~~~~~~~~~~g~~~~~~~v~~~g~~---~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a~~PVlvV~ 156 (156)
T 3fg9_A 81 VAEYVQLAEQRGVNQVEPLVYEGGDV---DDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAPISVIVVR 156 (156)
T ss_dssp HHHHHHHHHHHTCSSEEEEEEECSCH---HHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHCSSEEEEEC
T ss_pred HHHHHHHHHHcCCCceEEEEEeCCCH---HHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhCCCCEEEeC
Confidence 3344455566799 488777652322 3445555 5567789888887544333 2234456788998776
No 111
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=85.06 E-value=4.7 Score=32.49 Aligned_cols=79 Identities=5% Similarity=-0.152 Sum_probs=46.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC---------CCchHHHHHHHHHhhc--Cce-EEEEecCCcCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---------QNCKEALSYALSAKER--GIK-IIIVGDGVEAH 126 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH---------Rtp~~l~~~~~~~~~~--g~~-ViIa~AG~aa~ 126 (202)
.+|+|++- .-...-+.-.+.|++.|+.+.. +.+.- -.++.+.+.++++... |++ ||+.|+++...
T Consensus 109 ~rvgvlt~--~~~~~~~~~~~~l~~~G~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~gadaIvLgCT~l~~~ 185 (223)
T 2dgd_A 109 RKLWIGTP--YIKERTLEEVEWWRNKGFEIVG-YDGLGKIRGIDISNTPIFTIYRLVKRHLNEVLKADAVYIACTALSTY 185 (223)
T ss_dssp CEEEEEES--SCHHHHHHHHHHHHTTTCEEEE-EEECCCCSHHHHHTCCHHHHHHHHHTTHHHHTTSSEEEECCTTSCCT
T ss_pred CeEEEEeC--CchHHHHHHHHHHHhCCcEEec-ccCCCCCCcchhhccCHHHHHHHHHHHhcccCCCCEEEEeCCcccHH
Confidence 58999963 3344444556677888876422 22211 2456677777777666 775 66677777653
Q ss_pred -hhhhhhhccCCcEE
Q 028883 127 -LSGVAAANSQILVI 140 (202)
Q Consensus 127 -LpgvvA~~T~~PVI 140 (202)
+-.-+...+.+|||
T Consensus 186 ~~~~~l~~~~g~PVi 200 (223)
T 2dgd_A 186 EAVQYLHEDLDMPVV 200 (223)
T ss_dssp THHHHHHHHHTSCEE
T ss_pred HHHHHHHHHhCCCEE
Confidence 34444445567777
No 112
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=84.54 E-value=13 Score=29.10 Aligned_cols=80 Identities=11% Similarity=0.011 Sum_probs=53.1
Q ss_pred CeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc
Q 028883 59 PIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 135 (202)
Q Consensus 59 ~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T 135 (202)
..|+++....+| ..+.+.+.+.+++.|. ++.+...+..+++..++++.+..++++-||.......... .+. ..
T Consensus 3 ~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~~~-~l~-~~ 78 (255)
T 1byk_A 3 KVVAIIVTRLDSLSENLAVQTMLPAFYEQGY--DPIMMESQFSPQLVAEHLGVLKRRNIDGVVLFGFTGITEE-MLA-HW 78 (255)
T ss_dssp CEEEEEESCTTCHHHHHHHHHHHHHHHHHTC--EEEEEECTTCHHHHHHHHHHHHTTTCCEEEEECCTTCCTT-TSG-GG
T ss_pred CEEEEEeCCCCCccHHHHHHHHHHHHHHcCC--EEEEEeCCCcHHHHHHHHHHHHhcCCCEEEEecCccccHH-HHH-hc
Confidence 579999977666 2455666777888885 5666677778888888888888788886666543222222 222 23
Q ss_pred CCcEEEe
Q 028883 136 QILVIRV 142 (202)
Q Consensus 136 ~~PVIgV 142 (202)
..||+.+
T Consensus 79 ~~pvV~~ 85 (255)
T 1byk_A 79 QSSLVLL 85 (255)
T ss_dssp SSSEEEE
T ss_pred CCCEEEE
Confidence 4688765
No 113
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=84.48 E-value=9.4 Score=32.01 Aligned_cols=82 Identities=10% Similarity=0.093 Sum_probs=50.6
Q ss_pred CCeEEEEec--CCCCHH----HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEec-CCcCchhhh
Q 028883 58 APIVGIIME--SDLDLP----VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD-GVEAHLSGV 130 (202)
Q Consensus 58 ~~~V~IimG--S~SD~~----v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A-G~aa~Lpgv 130 (202)
+.+|++|.- +-.|.+ +.+.+.+.++++|+ ++.++..+. .....+.++.+.+++++.||+.. +....+--+
T Consensus 4 ~~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~--~~~~~~~~~-~~~~~~~l~~l~~~~~dgIi~~~~~~~~~~~~~ 80 (318)
T 2fqx_A 4 DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNA--KCKYVTAST-DAEYVPSLSAFADENMGLVVACGSFLVEAVIET 80 (318)
T ss_dssp CCEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTC--EEEEEECCS-GGGHHHHHHHHHHTTCSEEEEESTTTHHHHHHH
T ss_pred CcEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCC--eEEEEeCCC-HHHHHHHHHHHHHcCCCEEEECChhHHHHHHHH
Confidence 357999874 667743 34555667778885 555555443 34446777888888899888764 333333333
Q ss_pred hhhccCCcEEEe
Q 028883 131 AAANSQILVIRV 142 (202)
Q Consensus 131 vA~~T~~PVIgV 142 (202)
.......|++-|
T Consensus 81 a~~~p~~p~v~i 92 (318)
T 2fqx_A 81 SARFPKQKFLVI 92 (318)
T ss_dssp HHHCTTSCEEEE
T ss_pred HHHCCCCEEEEE
Confidence 222346788876
No 114
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=83.86 E-value=15 Score=29.33 Aligned_cols=80 Identities=9% Similarity=0.166 Sum_probs=56.6
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~e-v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA 132 (202)
+...|++++.+.++ ....+.+.+.+++.|+ + +.+...+..+++-.++++.+..++++-||... ..+-- .
T Consensus 9 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~---~~~~~--~ 81 (277)
T 3hs3_A 9 KSKMIGIIIPDLNNRFYAQIIDGIQEVIQKEGY--TALISFSTNSDVKKYQNAIINFENNNVDGIITSA---FTIPP--N 81 (277)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEEC---CCCCT--T
T ss_pred CCCEEEEEeCCCCChhHHHHHHHHHHHHHHCCC--CEEEEEeCCCChHHHHHHHHHHHhCCCCEEEEcc---hHHHH--H
Confidence 44689999988776 3455667777788875 6 67788888999988899988888898777665 22211 1
Q ss_pred hccCCcEEEec
Q 028883 133 ANSQILVIRVP 143 (202)
Q Consensus 133 ~~T~~PVIgVP 143 (202)
.....|||-+=
T Consensus 82 ~~~~iPvV~~~ 92 (277)
T 3hs3_A 82 FHLNTPLVMYD 92 (277)
T ss_dssp CCCSSCEEEES
T ss_pred HhCCCCEEEEc
Confidence 23467887653
No 115
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=83.84 E-value=4.1 Score=34.75 Aligned_cols=82 Identities=9% Similarity=0.094 Sum_probs=52.9
Q ss_pred CCeEEEEecCCCCHH---HHHHHHHHHH----HhCCCeEEEEEccCCCchHH--------------HHHHHHHhhcCceE
Q 028883 58 APIVGIIMESDLDLP---VMNDAARTLS----DFGVPYEIKILPPHQNCKEA--------------LSYALSAKERGIKI 116 (202)
Q Consensus 58 ~~~V~IimGS~SD~~---v~~~a~~~L~----~~gi~~ev~V~SaHRtp~~l--------------~~~~~~~~~~g~~V 116 (202)
+..+||| |+-+=+. +++++.+... ...+| +.+.|--..|++. .+.++.+++.|++.
T Consensus 26 ~k~IGii-GGmg~~aT~~~~~~i~~~~~~~~D~~h~p--~~~~s~~~i~~r~~~~~~~g~~~~~~l~~~~~~L~~~Gad~ 102 (268)
T 3s81_A 26 KHTIGIL-GGMGPAATADMLEKFVELRHASCDQQHIP--LIVSSIPDIPDRTACLLSGGPSPYRYLERYLHMLEDAGAEC 102 (268)
T ss_dssp CCCEEEE-CCSSHHHHHHHHHHHHHHSCCSSGGGSCC--EEEEECTTSCCHHHHHHHCCCCSHHHHHHHHHHHHHTTCSE
T ss_pred CCcEEEE-ecCCHHHHHHHHHHHHHhhHhhcCCCCCC--EEEeccCCHHHHHHHHHhCCchHHHHHHHHHHHHHHcCCCE
Confidence 3579999 7777776 4444444332 23444 4666766667666 77788888889985
Q ss_pred EE-EecCCcCchhhhhhhccCCcEEEec
Q 028883 117 II-VGDGVEAHLSGVAAANSQILVIRVP 143 (202)
Q Consensus 117 iI-a~AG~aa~LpgvvA~~T~~PVIgVP 143 (202)
|+ ++-..+..++- +...++.||||+.
T Consensus 103 IVIaCNTah~~l~~-lr~~~~iPvigii 129 (268)
T 3s81_A 103 IVIPCNTAHYWFDD-LQNVAKARMISIL 129 (268)
T ss_dssp EECSCSGGGGGHHH-HHHHCSSEEECHH
T ss_pred EEEeCCCHHHHHHH-HHHHCCCCEEccc
Confidence 44 44444555554 4456789999963
No 116
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=83.77 E-value=8.9 Score=30.92 Aligned_cols=91 Identities=8% Similarity=-0.014 Sum_probs=57.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHH-hCCCeEEEEEccC-----------CCchHHHHHHHHHhhcCceEEEEec-CCcC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSD-FGVPYEIKILPPH-----------QNCKEALSYALSAKERGIKIIIVGD-GVEA 125 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~-~gi~~ev~V~SaH-----------Rtp~~l~~~~~~~~~~g~~ViIa~A-G~aa 125 (202)
.+|+||.||.+.-..-.+.++.+.+ +.-.+|+.+.... ..|+.+.++.+..++ ++.||.+. -=.+
T Consensus 3 k~I~vi~GS~R~~S~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~--aD~~ii~tPeYn~ 80 (190)
T 3u7r_A 3 KTVAVMVGSLRKDSLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEH--SDAVLAITPEYNR 80 (190)
T ss_dssp EEEEEEESCCSTTCHHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHT--SSEEEEECCCBTT
T ss_pred CEEEEEECCCCCCCHHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHh--CCcEEEechhhcc
Confidence 4799999998876665555555543 3335677776653 346677777776655 56455443 3355
Q ss_pred chhhhh----h---------hccCCcEEEecCCCCCCCh
Q 028883 126 HLSGVA----A---------ANSQILVIRVPLLSEDWSE 151 (202)
Q Consensus 126 ~Lpgvv----A---------~~T~~PVIgVP~~~~~l~G 151 (202)
..||++ - .+..+||.-|-++.+..+|
T Consensus 81 s~pg~LKn~iDwlsr~~~~~~~~gKpv~~v~~S~G~~Gg 119 (190)
T 3u7r_A 81 SYPGMIKNAIDWATRPYGQNSWKGKPAAVIGTSPGVIGA 119 (190)
T ss_dssp BCCHHHHHHHHHHHCSTTCCTTTTCEEEEEEEESSTTTT
T ss_pred cCCHHHHHHHHHhcccccCCccCCCEEEEEEeCCchhhH
Confidence 555543 2 3567999888777666666
No 117
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=83.69 E-value=4.3 Score=34.24 Aligned_cols=46 Identities=7% Similarity=-0.062 Sum_probs=24.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK 110 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~ 110 (202)
.+|++|||+.+- +.+.+++.|-+-|.. |+-.+|..+++++..++.+
T Consensus 7 gKvalVTGas~G--IG~aiA~~la~~Ga~----Vv~~~~~~~~~~~~~~~i~ 52 (254)
T 4fn4_A 7 NKVVIVTGAGSG--IGRAIAKKFALNDSI----VVAVELLEDRLNQIVQELR 52 (254)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTCE----EEEEESCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCH--HHHHHHHHHHHcCCE----EEEEECCHHHHHHHHHHHH
Confidence 578888888773 344455555554531 2223444444444444433
No 118
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=83.63 E-value=15 Score=30.61 Aligned_cols=83 Identities=7% Similarity=0.137 Sum_probs=50.1
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCC-chHHHHHHHHHhhcCceEEEEecCCcCchhhh--
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIKIIIVGDGVEAHLSGV-- 130 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRt-p~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv-- 130 (202)
+...|+++..+.++- .+.+.+.+.+++.|+ ++.+...+.. ++...++++.+..++++-||........ .-.
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~~l~~l~~~~vdGiIi~~~~~~~-~~~~~ 136 (349)
T 1jye_A 60 QSLLIGVATSSLALHAPSQIVAAILSRADQLGA--SVVVSMVERSGVEACKTAVHNLLAQRVSGLIINYPLDDQ-DAIAV 136 (349)
T ss_dssp --CEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECCSSSHHHHHHHHHHHHTTTCSCEEEESCCCHH-HHHHH
T ss_pred CCCEEEEEeCCCCcccHHHHHHHHHHHHHHcCC--EEEEEeCCCCcHHHHHHHHHHHHHCCCCEEEEecCCCCh-hHHHH
Confidence 346899999765552 355666777888886 5555655554 5666777777777788866665332211 111
Q ss_pred hhhccCCcEEEe
Q 028883 131 AAANSQILVIRV 142 (202)
Q Consensus 131 vA~~T~~PVIgV 142 (202)
.......||+-+
T Consensus 137 ~~~~~~iPvV~i 148 (349)
T 1jye_A 137 EAACTNVPALFL 148 (349)
T ss_dssp HHHTTTSCEEES
T ss_pred HHhhCCCCEEEE
Confidence 122356888865
No 119
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=83.47 E-value=2.6 Score=30.56 Aligned_cols=75 Identities=13% Similarity=0.056 Sum_probs=51.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQIL 138 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~P 138 (202)
..|.|.+. +-=|.++++...|+++|++|+..=+.-+..+..+.+.+.+ ..+..+.|
T Consensus 17 ~~v~vy~~--~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~~~~~~~~~l~~----------------------~~g~~tvP 72 (114)
T 3h8q_A 17 SRVVIFSK--SYCPHSTRVKELFSSLGVECNVLELDQVDDGARVQEVLSE----------------------ITNQKTVP 72 (114)
T ss_dssp CSEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEETTTSTTHHHHHHHHHH----------------------HHSCCSSC
T ss_pred CCEEEEEc--CCCCcHHHHHHHHHHcCCCcEEEEecCCCChHHHHHHHHH----------------------HhCCCccC
Confidence 35666665 4569999999999999999987766666555555454322 12446788
Q ss_pred EEEecCCCCCCChhh-HHHhhc
Q 028883 139 VIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 139 VIgVP~~~~~l~G~D-LlS~vq 159 (202)
+|-+ .+..++|.| |..+-+
T Consensus 73 ~vfi--~g~~igG~d~l~~l~~ 92 (114)
T 3h8q_A 73 NIFV--NKVHVGGCDQTFQAYQ 92 (114)
T ss_dssp EEEE--TTEEEESHHHHHHHHH
T ss_pred EEEE--CCEEEeCHHHHHHHHH
Confidence 8854 455678888 766654
No 120
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=83.02 E-value=3.8 Score=29.42 Aligned_cols=65 Identities=20% Similarity=0.190 Sum_probs=40.0
Q ss_pred HHHHHHHHH----hCC-CeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchh-----h---hhhhccCCcEEE
Q 028883 75 NDAARTLSD----FGV-PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-----G---VAAANSQILVIR 141 (202)
Q Consensus 75 ~~a~~~L~~----~gi-~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lp-----g---vvA~~T~~PVIg 141 (202)
+++.+.|++ .|+ +++..+.. ..| ...+.+.+++.+++.||.++-+.+.+. + -+.-+++.||+-
T Consensus 60 ~~~~~~l~~~~~~~g~~~~~~~~~~--g~~--~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlv 135 (137)
T 2z08_A 60 ERAEGVLEEARALTGVPKEDALLLE--GVP--AEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEAPCPVLL 135 (137)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEE--SSH--HHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHcCCCccEEEEEe--cCH--HHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcCCCCEEE
Confidence 445555554 788 87777653 222 345556666677888888776544333 2 234467889987
Q ss_pred ec
Q 028883 142 VP 143 (202)
Q Consensus 142 VP 143 (202)
||
T Consensus 136 v~ 137 (137)
T 2z08_A 136 VR 137 (137)
T ss_dssp EC
T ss_pred eC
Confidence 76
No 121
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=82.85 E-value=3.9 Score=34.78 Aligned_cols=84 Identities=13% Similarity=0.028 Sum_probs=57.7
Q ss_pred CeEEEEecC----CCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhc
Q 028883 59 PIVGIIMES----DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 134 (202)
Q Consensus 59 ~~V~IimGS----~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~ 134 (202)
.++.||.=- ..-....+++...|++.|+.+++... ..+....++++++.+ ++++||+ +|+.+.|--++.++
T Consensus 9 ~~~~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t---~~~~~a~~~~~~~~~-~~d~vv~-~GGDGTl~~v~~~l 83 (304)
T 3s40_A 9 EKVLLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHT---KEQGDATKYCQEFAS-KVDLIIV-FGGDGTVFECTNGL 83 (304)
T ss_dssp SSEEEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEEC---CSTTHHHHHHHHHTT-TCSEEEE-EECHHHHHHHHHHH
T ss_pred CEEEEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEc---cCcchHHHHHHHhhc-CCCEEEE-EccchHHHHHHHHH
Confidence 355555422 22246678899999999998877653 345667778877754 6776554 68888888887775
Q ss_pred ----cCCcEEEecCCCC
Q 028883 135 ----SQILVIRVPLLSE 147 (202)
Q Consensus 135 ----T~~PVIgVP~~~~ 147 (202)
+..|+-.+|.-++
T Consensus 84 ~~~~~~~~l~iiP~Gt~ 100 (304)
T 3s40_A 84 APLEIRPTLAIIPGGTC 100 (304)
T ss_dssp TTCSSCCEEEEEECSSC
T ss_pred hhCCCCCcEEEecCCcH
Confidence 4578888887654
No 122
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=82.63 E-value=19 Score=29.62 Aligned_cols=82 Identities=11% Similarity=0.127 Sum_probs=54.3
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+...|+++....++- ...+.+.+.+++.|. ++.+...+..+++..++++.+..++++-||....... ...+.-
T Consensus 62 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~--~~~~~~ 137 (332)
T 2o20_A 62 RTTTVGVILPTITSTYFAAITRGVDDIASMYKY--NMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLD--EKIRTS 137 (332)
T ss_dssp CCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECSSCCC--HHHHHH
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHcCC--EEEEEECCCChHHHHHHHHHHHhCCCCEEEEeCCCCC--HHHHHH
Confidence 446899999765552 345566677778885 5666677778888888888887888887777653221 122221
Q ss_pred --ccCCcEEEe
Q 028883 134 --NSQILVIRV 142 (202)
Q Consensus 134 --~T~~PVIgV 142 (202)
....||+.+
T Consensus 138 l~~~~iPvV~~ 148 (332)
T 2o20_A 138 LKNSRTPVVLV 148 (332)
T ss_dssp HHHHCCCEEEE
T ss_pred HHhCCCCEEEE
Confidence 356888876
No 123
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=82.32 E-value=5.4 Score=34.29 Aligned_cols=85 Identities=18% Similarity=0.225 Sum_probs=57.2
Q ss_pred CeEEEEecCCCCH-HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc--
Q 028883 59 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS-- 135 (202)
Q Consensus 59 ~~V~IimGS~SD~-~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T-- 135 (202)
.++.||.=..|.- ...+++.+.|++.|+++++.... .+....++++++..+++++||+ .|+.+.+-.++.++.
T Consensus 30 ~~~~vi~Np~sg~~~~~~~i~~~l~~~g~~~~~~~t~---~~~~~~~~~~~~~~~~~d~vvv-~GGDGTl~~v~~~l~~~ 105 (332)
T 2bon_A 30 PASLLILNGKSTDNLPLREAIMLLREEGMTIHVRVTW---EKGDAARYVEEARKFGVATVIA-GGGDGTINEVSTALIQC 105 (332)
T ss_dssp CCEEEEECSSSTTCHHHHHHHHHHHTTTCCEEEEECC---STTHHHHHHHHHHHHTCSEEEE-EESHHHHHHHHHHHHHC
T ss_pred ceEEEEECCCCCCCchHHHHHHHHHHcCCcEEEEEec---CcchHHHHHHHHHhcCCCEEEE-EccchHHHHHHHHHhhc
Confidence 4577765333221 56788889999999988776543 2444566666665566776654 688888888887764
Q ss_pred ----CCcEEEecCCCC
Q 028883 136 ----QILVIRVPLLSE 147 (202)
Q Consensus 136 ----~~PVIgVP~~~~ 147 (202)
..|+-.+|.-+.
T Consensus 106 ~~~~~~plgiiP~Gt~ 121 (332)
T 2bon_A 106 EGDDIPALGILPLGTA 121 (332)
T ss_dssp CSSCCCEEEEEECSSS
T ss_pred ccCCCCeEEEecCcCH
Confidence 568777887654
No 124
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=82.23 E-value=6.9 Score=27.86 Aligned_cols=76 Identities=14% Similarity=0.058 Sum_probs=48.8
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc
Q 028883 56 TDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 135 (202)
Q Consensus 56 ~~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T 135 (202)
.....|.|.+.+ .=|.++++...|+++|++|+..=+.. .++...++.+.. .+..
T Consensus 13 ~~~~~v~vy~~~--~Cp~C~~ak~~L~~~~i~y~~idI~~--~~~~~~~l~~~~----------------------~g~~ 66 (99)
T 3qmx_A 13 AVSAKIEIYTWS--TCPFCMRALALLKRKGVEFQEYCIDG--DNEAREAMAARA----------------------NGKR 66 (99)
T ss_dssp CCCCCEEEEECT--TCHHHHHHHHHHHHHTCCCEEEECTT--CHHHHHHHHHHT----------------------TTCC
T ss_pred cCCCCEEEEEcC--CChhHHHHHHHHHHCCCCCEEEEcCC--CHHHHHHHHHHh----------------------CCCC
Confidence 344567776654 45999999999999999998654443 344333332210 1456
Q ss_pred CCcEEEecCCCCCCChhh-HHHhhc
Q 028883 136 QILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 136 ~~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
..|+|= +.+..++|.| |..+.+
T Consensus 67 ~vP~if--i~g~~igG~d~l~~~~~ 89 (99)
T 3qmx_A 67 SLPQIF--IDDQHIGGCDDIYALDG 89 (99)
T ss_dssp CSCEEE--ETTEEEESHHHHHHHHH
T ss_pred CCCEEE--ECCEEEeChHHHHHHHH
Confidence 788873 3455577888 776664
No 125
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=81.98 E-value=2.9 Score=31.17 Aligned_cols=74 Identities=12% Similarity=0.017 Sum_probs=49.3
Q ss_pred CeEEEEecCC---CCHHHHHHHHHHHHHhCCC---eEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh
Q 028883 59 PIVGIIMESD---LDLPVMNDAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 132 (202)
Q Consensus 59 ~~V~IimGS~---SD~~v~~~a~~~L~~~gi~---~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA 132 (202)
..|.|.|-|+ ..=|++.++.+.|+++|++ |+..=+. ..++...++.+ ..
T Consensus 16 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~--~~~~~~~~l~~-----------------------~s 70 (121)
T 3gx8_A 16 APVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVL--EDPELREGIKE-----------------------FS 70 (121)
T ss_dssp CSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECT--TCHHHHHHHHH-----------------------HH
T ss_pred CCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEec--CCHHHHHHHHH-----------------------Hh
Confidence 4688888776 3578999999999999999 6543222 33333333321 23
Q ss_pred hccCCcEEEecCCCCCCChhh-HHHhhc
Q 028883 133 ANSQILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 133 ~~T~~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
+..+.|+|- +.+...+|.| |..+.+
T Consensus 71 g~~tvP~vf--I~g~~iGG~d~l~~l~~ 96 (121)
T 3gx8_A 71 EWPTIPQLY--VNKEFIGGCDVITSMAR 96 (121)
T ss_dssp TCCSSCEEE--ETTEEEESHHHHHHHHH
T ss_pred CCCCCCeEE--ECCEEEecHHHHHHHHH
Confidence 567789885 3555678888 777654
No 126
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=81.97 E-value=5.7 Score=32.43 Aligned_cols=75 Identities=13% Similarity=0.023 Sum_probs=51.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh--------hhhhccCCcE
Q 028883 68 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILV 139 (202)
Q Consensus 68 ~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg--------vvA~~T~~PV 139 (202)
......++++.+.++..|++++..+...... ...+.+.+++++++.||.+.-+.+.+.. -+.-.++.||
T Consensus 47 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~---~~~i~~~a~~~~~dliV~G~~~~~~~~~~~~gs~~~~vl~~~~~PV 123 (290)
T 3mt0_A 47 RDHSAALNDLAQELREEGYSVSTNQAWKDSL---HQTIIAEQQAEGCGLIIKQHFPDNPLKKAILTPDDWKLLRFAPCPV 123 (290)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEEECSSSH---HHHHHHHHHHHTCSEEEEECCCSCTTSTTSCCHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEEEEeCCCH---HHHHHHHHHhcCCCEEEEecccCCchhhcccCHHHHHHHhcCCCCE
Confidence 5566788888889999999999888633333 3344455556778888888766554433 2345689999
Q ss_pred EEecCC
Q 028883 140 IRVPLL 145 (202)
Q Consensus 140 IgVP~~ 145 (202)
+-||..
T Consensus 124 lvv~~~ 129 (290)
T 3mt0_A 124 LMTKTA 129 (290)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 999954
No 127
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=81.62 E-value=10 Score=32.02 Aligned_cols=80 Identities=14% Similarity=0.064 Sum_probs=50.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc-c-------CCCchHHHHHHHHHhhcCce-EEEE-ecCCcCc-h
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP-P-------HQNCKEALSYALSAKERGIK-IIIV-GDGVEAH-L 127 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S-a-------HRtp~~l~~~~~~~~~~g~~-ViIa-~AG~aa~-L 127 (202)
.+|+|++ +.-...-+.-.+.|+..|+++..-... . .-.++.+.+.++++..+|++ ||+. |.++... +
T Consensus 147 ~rvgvlt--p~~~~~~~~~~~~l~~~Gi~v~~~~~~~~~~~~~~g~~~~~~l~~~~~~l~~~gadaIvLg~CT~l~~~~~ 224 (273)
T 2xed_A 147 QRVALVT--PYMRPLAEKVVAYLEAEGFTISDWRALEVADNTEVGCIPGEQVMAAARSLDLSEVDALVISCAVQMPSLPL 224 (273)
T ss_dssp CEEEEEE--CSCHHHHHHHHHHHHHTTCEEEEEEECCCCBHHHHHTCCHHHHHHHHHHSCCTTCSEEEEESSSSSCCTTH
T ss_pred CeEEEEc--CChhhhHHHHHHHHHHCCCEEeccccCCCccchhhcccCHHHHHHHHHHHhhCCCCEEEEcCCCCcchHHh
Confidence 5899996 333444556667788899874321111 1 22467788888888777886 5566 7777653 3
Q ss_pred hhhhhhccCCcEE
Q 028883 128 SGVAAANSQILVI 140 (202)
Q Consensus 128 pgvvA~~T~~PVI 140 (202)
-.-+...+.+|||
T Consensus 225 ~~~le~~lg~PVi 237 (273)
T 2xed_A 225 VETAEREFGIPVL 237 (273)
T ss_dssp HHHHHHHHSSCEE
T ss_pred HHHHHHHhCCCEE
Confidence 4444445678887
No 128
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=81.38 E-value=4 Score=33.50 Aligned_cols=67 Identities=13% Similarity=0.054 Sum_probs=40.3
Q ss_pred HHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh--------hhhccCCcEEEecCCC
Q 028883 77 AARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVPLLS 146 (202)
Q Consensus 77 a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv--------vA~~T~~PVIgVP~~~ 146 (202)
+.+.++..|++++..+...... ...+.+.+++.+++.||.+.-+...+... +.-.++.||+-||...
T Consensus 78 ~~~~~~~~~v~~~~~~~~~g~~---~~~i~~~a~~~~~DLiV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVlvv~~~~ 152 (319)
T 3olq_A 78 QARYYLEAGIQIDIKVIWHNRP---YEAIIEEVITDKHDLLIKMAHQHDKLGSLIFTPLDWQLLRKCPAPVWMVKDKE 152 (319)
T ss_dssp HHHHHHHTTCCEEEEEEECSCH---HHHHHHHHHHHTCSEEEEEEBCC--CCSCBCCHHHHHHHHHCSSCEEEEESSC
T ss_pred HHHHHhhcCCeEEEEEEecCCh---HHHHHHHHHhcCCCEEEEecCcCchhhcccccccHHHHHhcCCCCEEEecCcc
Confidence 3333445699988887633333 33444445556788777776554443332 4567899999999653
No 129
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=81.35 E-value=5.8 Score=32.87 Aligned_cols=83 Identities=12% Similarity=0.162 Sum_probs=49.3
Q ss_pred CCeEEEEec-CCCCH----HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecC-CcCchhhhh
Q 028883 58 APIVGIIME-SDLDL----PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG-VEAHLSGVA 131 (202)
Q Consensus 58 ~~~V~IimG-S~SD~----~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG-~aa~Lpgvv 131 (202)
..+|++|.- +-+|. .+.+.+.+.++++|+ ++.++..+..+++..++++.+.+++++.||.... ....+--+.
T Consensus 5 ~~~Ig~v~~~~~~d~~f~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~l~~l~~~~vdgIi~~~~~~~~~~~~~~ 82 (296)
T 2hqb_A 5 GGMVGLLVEDTIDDQGWNRKAYEGLLNIHSNLDV--DVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHGHAFAEYFSTIH 82 (296)
T ss_dssp -CEEEEECCCC----CCTHHHHHHHHHHHHHSCC--EEEEECCCCSHHHHHHHHHHHHHTTCCEEEECSTHHHHHHHTTT
T ss_pred CcEEEEEECCCCCCCcHHHHHHHHHHHHHHHhCC--eEEEEeCCCCHHHHHHHHHHHHHCCCCEEEEcCHhHHHHHHHHH
Confidence 457999885 34553 456666777888985 5666665566666777888888889998887642 222222211
Q ss_pred hhccCCcEEEe
Q 028883 132 AANSQILVIRV 142 (202)
Q Consensus 132 A~~T~~PVIgV 142 (202)
......|++-|
T Consensus 83 ~~~p~~p~v~i 93 (296)
T 2hqb_A 83 NQYPDVHFVSF 93 (296)
T ss_dssp TSCTTSEEEEE
T ss_pred HHCCCCEEEEE
Confidence 11225667765
No 130
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=81.19 E-value=8.4 Score=30.48 Aligned_cols=81 Identities=10% Similarity=0.144 Sum_probs=54.2
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh-
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA- 132 (202)
+...|++++.+.+|- ...+.+.+.+++.|+ ++.+...+..++...++++.+..++++-||..... +..+.
T Consensus 7 ~~~~Ig~i~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~~dgiIi~~~~----~~~~~~ 80 (277)
T 3e61_A 7 KSKLIGLLLPDMSNPFFTLIARGVEDVALAHGY--QVLIGNSDNDIKKAQGYLATFVSHNCTGMISTAFN----ENIIEN 80 (277)
T ss_dssp ---CEEEEESCTTSHHHHHHHHHHHHHHHHTTC--CEEEEECTTCHHHHHHHHHHHHHTTCSEEEECGGG----HHHHHH
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCC----hHHHHH
Confidence 346799999876663 345566677788886 45567888889988899998888889887776522 22222
Q ss_pred --hccCCcEEEec
Q 028883 133 --ANSQILVIRVP 143 (202)
Q Consensus 133 --~~T~~PVIgVP 143 (202)
.....|||.+=
T Consensus 81 ~l~~~~iPvV~~~ 93 (277)
T 3e61_A 81 TLTDHHIPFVFID 93 (277)
T ss_dssp HHHHC-CCEEEGG
T ss_pred HHHcCCCCEEEEe
Confidence 23478888653
No 131
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=80.93 E-value=3.9 Score=30.59 Aligned_cols=74 Identities=14% Similarity=0.021 Sum_probs=49.1
Q ss_pred CeEEEEecCC---CCHHHHHHHHHHHHHhCCC-eEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhc
Q 028883 59 PIVGIIMESD---LDLPVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 134 (202)
Q Consensus 59 ~~V~IimGS~---SD~~v~~~a~~~L~~~gi~-~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~ 134 (202)
..|.|.|-++ ..=|+++++.+.|+++|++ |+..=+.- .++...++.+ ..+.
T Consensus 20 ~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~--d~~~~~~l~~-----------------------~tg~ 74 (118)
T 2wem_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD--DPELRQGIKD-----------------------YSNW 74 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS--CHHHHHHHHH-----------------------HHTC
T ss_pred CCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC--CHHHHHHHHH-----------------------HhCC
Confidence 4688888775 3578999999999999996 87654443 3333333321 1356
Q ss_pred cCCcEEEecCCCCCCChhh-HHHhhc
Q 028883 135 SQILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 135 T~~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
.+.|+|- +.+...+|.| |..+.+
T Consensus 75 ~tvP~vf--I~g~~IGG~d~l~~l~~ 98 (118)
T 2wem_A 75 PTIPQVY--LNGEFVGGCDILLQMHQ 98 (118)
T ss_dssp CSSCEEE--ETTEEEESHHHHHHHHH
T ss_pred CCcCeEE--ECCEEEeChHHHHHHHH
Confidence 7789885 3455678888 776544
No 132
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=80.62 E-value=6.9 Score=28.01 Aligned_cols=65 Identities=14% Similarity=0.169 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHhCCCe---EEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh--------hhhhccCCcEEE
Q 028883 73 VMNDAARTLSDFGVPY---EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILVIR 141 (202)
Q Consensus 73 v~~~a~~~L~~~gi~~---ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg--------vvA~~T~~PVIg 141 (202)
..+++.+.++..|+++ +..+..- .| ...+.+.+++.+++.||.++-+...+.. -+.-+++.||+-
T Consensus 71 ~l~~~~~~~~~~g~~~~~~~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~~pVlv 146 (147)
T 3hgm_A 71 IAVQAKTRATELGVPADKVRAFVKGG--RP--SRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAHCPVLV 146 (147)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEEES--CH--HHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHhcCCCccceEEEEecC--CH--HHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCCCCEEE
Confidence 4455666677789988 7666543 22 3455666666788988888765444332 223456777764
No 133
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=80.05 E-value=16 Score=27.10 Aligned_cols=129 Identities=12% Similarity=0.042 Sum_probs=67.8
Q ss_pred CCeEEEEecCCC---CHHHHHHHHHHHHHhCCCeEEEEEccCC----CchH------H--HHHHHHHhhcCceEEEEecC
Q 028883 58 APIVGIIMESDL---DLPVMNDAARTLSDFGVPYEIKILPPHQ----NCKE------A--LSYALSAKERGIKIIIVGDG 122 (202)
Q Consensus 58 ~~~V~IimGS~S---D~~v~~~a~~~L~~~gi~~ev~V~SaHR----tp~~------l--~~~~~~~~~~g~~ViIa~AG 122 (202)
.+.|.|..||.. .....+++.+.|++++ +.+-+..-.. .++. + .++.. ...++++|.-+|
T Consensus 21 ~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~--~~~~~~~g~~~~~~~~~~v~~~~~~~~~~~l~---~~~ad~~I~~~G 95 (170)
T 2o6l_A 21 NGVVVFSLGSMVSNMTEERANVIASALAQIP--QKVLWRFDGNKPDTLGLNTRLYKWIPQNDLLG---HPKTRAFITHGG 95 (170)
T ss_dssp TCEEEEECCSCCTTCCHHHHHHHHHHHTTSS--SEEEEECCSSCCTTCCTTEEEESSCCHHHHHT---STTEEEEEECCC
T ss_pred CCEEEEECCCCcccCCHHHHHHHHHHHHhCC--CeEEEEECCcCcccCCCcEEEecCCCHHHHhc---CCCcCEEEEcCC
Confidence 356777777764 5667777777777665 3443333221 1111 0 12221 144799998665
Q ss_pred CcCchhhhhhhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecC-ChhhHHHHHHHHHcc-CCHHHHHHHHHHH
Q 028883 123 VEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-ADEDLLERIRKYV 200 (202)
Q Consensus 123 ~aa~LpgvvA~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~-n~~NAAl~Aa~IL~~-~d~~l~~kl~~~~ 200 (202)
...- +=|-..-+|+|.+|.... ..+.. .-+.+ .|.. .+ +. +..+..-++..|..+ .|++++++.++++
T Consensus 96 ~~t~---~Ea~~~G~P~i~~p~~~~-Q~~na-~~l~~--~g~g--~~-~~~~~~~~~~l~~~i~~ll~~~~~~~~a~~~~ 165 (170)
T 2o6l_A 96 ANGI---YEAIYHGIPMVGIPLFAD-QPDNI-AHMKA--RGAA--VR-VDFNTMSSTDLLNALKRVINDPSYKENVMKLS 165 (170)
T ss_dssp HHHH---HHHHHHTCCEEECCCSTT-HHHHH-HHHHT--TTSE--EE-CCTTTCCHHHHHHHHHHHHHCHHHHHHHHHHC
T ss_pred ccHH---HHHHHcCCCEEeccchhh-HHHHH-HHHHH--cCCe--EE-eccccCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 4222 223346799999998532 11111 11222 3543 23 33 222444555555444 5888999888775
Q ss_pred h
Q 028883 201 E 201 (202)
Q Consensus 201 ~ 201 (202)
+
T Consensus 166 ~ 166 (170)
T 2o6l_A 166 R 166 (170)
T ss_dssp -
T ss_pred H
Confidence 4
No 134
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=79.80 E-value=20 Score=28.20 Aligned_cols=78 Identities=8% Similarity=0.011 Sum_probs=39.8
Q ss_pred EEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh--cc
Q 028883 61 VGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--NS 135 (202)
Q Consensus 61 V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~--~T 135 (202)
|+++.-+.++- ...+.+.+.+++.|+ ++.+......+++..++++.+..++++.||........ ..+.- ..
T Consensus 2 Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~~~--~~~~~~~~~ 77 (276)
T 2h0a_A 2 VSVLLPFVATEFYRRLVEGIEGVLLEQRY--DLALFPILSLARLKRYLENTTLAYLTDGLILASYDLTE--RFEEGRLPT 77 (276)
T ss_dssp EEEEECCSCCHHHHHHHHHHHHHHGGGTC--EEEECCCCSCCCCC---------CCCSEEEEESCCCC--------CCSC
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHCCC--EEEEEeCCCchhhHHHHHHHHHhCCCCEEEEecCCCCH--HHHHHHhhc
Confidence 67777655542 344556666777875 66666666666666667777767788877765543221 22222 24
Q ss_pred CCcEEEe
Q 028883 136 QILVIRV 142 (202)
Q Consensus 136 ~~PVIgV 142 (202)
..||+.+
T Consensus 78 ~iPvV~~ 84 (276)
T 2h0a_A 78 ERPVVLV 84 (276)
T ss_dssp SSCEEEE
T ss_pred CCCEEEE
Confidence 5788875
No 135
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=79.56 E-value=24 Score=28.92 Aligned_cols=80 Identities=11% Similarity=0.149 Sum_probs=53.2
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
+...|+++....++- ...+.+.+.+++.|. ++.+...+..+++..++++.+..++++-|| ....... . .+ .
T Consensus 59 ~~~~Igvi~~~~~~~~~~~~~~gi~~~~~~~g~--~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI-~~~~~~~-~-~l-~ 132 (330)
T 3ctp_A 59 NSKTIGLMVPNISNPFFNQMASVIEEYAKNKGY--TLFLCNTDDDKEKEKTYLEVLQSHRVAGII-ASRSQCE-D-EY-A 132 (330)
T ss_dssp -CCEEEEEESCTTSHHHHHHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHHHHHHTTCSEEE-EETCCCS-G-GG-T
T ss_pred CCCEEEEEeCCCCCcHHHHHHHHHHHHHHHCCC--EEEEEeCCCChHHHHHHHHHHHhCCCCEEE-ECCCCCH-H-HH-H
Confidence 346899999766553 345566777778886 556667777888888888888888898888 5433221 1 22 2
Q ss_pred ccCCcEEEe
Q 028883 134 NSQILVIRV 142 (202)
Q Consensus 134 ~T~~PVIgV 142 (202)
....||+.+
T Consensus 133 ~~~iPvV~~ 141 (330)
T 3ctp_A 133 NIDIPVVAF 141 (330)
T ss_dssp TCCSCEEEE
T ss_pred hcCCCEEEE
Confidence 456788875
No 136
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=79.42 E-value=7.3 Score=28.16 Aligned_cols=61 Identities=15% Similarity=0.102 Sum_probs=35.6
Q ss_pred HHHhCCCe-EEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchh-------hhhhhccCCcEEEecCC
Q 028883 81 LSDFGVPY-EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS-------GVAAANSQILVIRVPLL 145 (202)
Q Consensus 81 L~~~gi~~-ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lp-------gvvA~~T~~PVIgVP~~ 145 (202)
++++|++. +..+..- .| ...+++.+++.+++.||.++-+...+. .-+.-+++.||+-||..
T Consensus 80 ~~~~~~~~~~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~~pVlvv~~~ 148 (150)
T 3tnj_A 80 GNTLGIDPAHRWLVWG--EP--REEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVLAVRLR 148 (150)
T ss_dssp HHHHTCCGGGEEEEES--CH--HHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCSSEEEEEECC
T ss_pred HHHcCCCcceEEEecC--CH--HHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCCCCEEEEeCC
Confidence 34578884 5555432 22 345555566677888888765544432 23345689999999875
No 137
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=78.67 E-value=12 Score=31.55 Aligned_cols=80 Identities=14% Similarity=0.140 Sum_probs=56.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEE-c----cCCCchHHHHHHHHH-hhcCceEEEEecCC----cCchh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL-P----PHQNCKEALSYALSA-KERGIKIIIVGDGV----EAHLS 128 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~-S----aHRtp~~l~~~~~~~-~~~g~~ViIa~AG~----aa~Lp 128 (202)
..+++.||... ++++.+.+-.+|..--+.|. . .|-.|....+.+..+ ++.++++|++++.- .+.++
T Consensus 57 ~V~av~~G~~~----a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~ 132 (252)
T 1efp_B 57 EIIAVSIGVKQ----AAETLRTALAMGADRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATG 132 (252)
T ss_dssp EEEEEEEESGG----GHHHHHHHHHHTCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHH
T ss_pred eEEEEEeCChh----HHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHH
Confidence 36788888744 34444444557998666665 3 366777777666555 33467999998765 48899
Q ss_pred hhhhhccCCcEEEe
Q 028883 129 GVAAANSQILVIRV 142 (202)
Q Consensus 129 gvvA~~T~~PVIgV 142 (202)
+.+|++...|.+.-
T Consensus 133 p~lA~~L~~~~vt~ 146 (252)
T 1efp_B 133 QMLAAILGWAQATF 146 (252)
T ss_dssp HHHHHHHTCEEEEE
T ss_pred HHHHHHhCCCcccc
Confidence 99999999998844
No 138
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=78.51 E-value=2.3 Score=34.01 Aligned_cols=84 Identities=11% Similarity=0.069 Sum_probs=51.8
Q ss_pred CCCeEEEEecCCCC----HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh
Q 028883 57 DAPIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD----~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA 132 (202)
+...|+++..++.+ ..+.+.+.+.+++.|....+. ..+..+++..++++.+..++++-||........ +-...
T Consensus 10 ~~~~Igvi~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~--~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~ 86 (289)
T 3g85_A 10 SKPTIALYWSSDISVNIISRFLRGLQSKLAKQNYNYNVV--ICPYKTDCLHLEKGISKENSFDAAIIANISNYD-LEYLN 86 (289)
T ss_dssp -CCEEEEEEETTSCGGGHHHHHHHHHHHHHHTTTCSEEE--EEEECTTCGGGCGGGSTTTCCSEEEESSCCHHH-HHHHH
T ss_pred CCceEEEEeccccchHHHHHHHHHHHHHHHHcCCeEEEE--ecCCCchhHHHHHHHHhccCCCEEEEecCCccc-HHHHH
Confidence 44689999984333 345666777788888866554 344445555566777777888877776543322 23332
Q ss_pred h-ccCCcEEEec
Q 028883 133 A-NSQILVIRVP 143 (202)
Q Consensus 133 ~-~T~~PVIgVP 143 (202)
. ....|||.+=
T Consensus 87 ~~~~~iPvV~~~ 98 (289)
T 3g85_A 87 KASLTLPIILFN 98 (289)
T ss_dssp HCCCSSCEEEES
T ss_pred hccCCCCEEEEC
Confidence 2 3568988763
No 139
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=77.86 E-value=16 Score=31.06 Aligned_cols=80 Identities=9% Similarity=0.110 Sum_probs=56.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEE-c----cCCCchHHHHHHHHH-hhcCceEEEEecCC----cCchh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL-P----PHQNCKEALSYALSA-KERGIKIIIVGDGV----EAHLS 128 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~-S----aHRtp~~l~~~~~~~-~~~g~~ViIa~AG~----aa~Lp 128 (202)
..+++.||... ++++.+.+-.+|..--+.|. . .|-.|....+.+..+ ++.++++|++++.- .+.++
T Consensus 60 ~V~av~~G~~~----a~~~lr~ala~GaD~vi~v~~d~~~~~~~~~~~~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~ 135 (255)
T 1efv_B 60 EVIAVSCGPAQ----CQETIRTALAMGADRGIHVEVPPAEAERLGPLQVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTG 135 (255)
T ss_dssp EEEEEEEESTT----HHHHHHHHHHHTCSEEEEEECCHHHHTTCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHH
T ss_pred eEEEEEeCChh----HHHHHHHHHhcCCCEEEEEecChhhcccCCHHHHHHHHHHHHHhcCCCEEEEeCcccCCchhhHH
Confidence 35778888644 44444444557998666665 3 476777777766555 33467999998755 48899
Q ss_pred hhhhhccCCcEEEe
Q 028883 129 GVAAANSQILVIRV 142 (202)
Q Consensus 129 gvvA~~T~~PVIgV 142 (202)
+.+|++...|.+.-
T Consensus 136 p~lA~~L~~~~vt~ 149 (255)
T 1efv_B 136 QMTAGFLDWPQGTF 149 (255)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHHhCCCcccc
Confidence 99999999998854
No 140
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=77.34 E-value=4 Score=34.22 Aligned_cols=80 Identities=14% Similarity=0.119 Sum_probs=48.7
Q ss_pred CCCeEEEEecCCCC-----HHHHHHHHHHHHHhCCCeEEEEEccCCC-chHHHHHHHHHhhcCceEEEEecCC----cCc
Q 028883 57 DAPIVGIIMESDLD-----LPVMNDAARTLSDFGVPYEIKILPPHQN-CKEALSYALSAKERGIKIIIVGDGV----EAH 126 (202)
Q Consensus 57 ~~~~V~IimGS~SD-----~~v~~~a~~~L~~~gi~~ev~V~SaHRt-p~~l~~~~~~~~~~g~~ViIa~AG~----aa~ 126 (202)
.+.+|+|++|+.|+ +..++.+.+.|++.|+. +..+..... .+.+ ....+++++-+..+ .+.
T Consensus 12 ~~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~--v~~i~~~~~~~~~l-------~~~~~D~v~~~~hg~~ge~~~ 82 (317)
T 4eg0_A 12 RFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGID--AHPFDPAERPLSAL-------KDEGFVRAFNALHGGYGENGQ 82 (317)
T ss_dssp GGCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCE--EEEECTTTSCTTHH-------HHTTCCEEEECCCSGGGTSSH
T ss_pred hcceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCE--EEEEeCCCchHHHh-------hhcCCCEEEEcCCCCCCchHH
Confidence 34689999999998 34577888889999874 444443222 2222 22346655554443 345
Q ss_pred hhhhhhhccCCcEEEecCCC
Q 028883 127 LSGVAAANSQILVIRVPLLS 146 (202)
Q Consensus 127 LpgvvA~~T~~PVIgVP~~~ 146 (202)
+.+++.. ..+|++|.++..
T Consensus 83 ~~~~le~-~gip~~g~~~~~ 101 (317)
T 4eg0_A 83 IQGALDF-YGIRYTGSGVLG 101 (317)
T ss_dssp HHHHHHH-HTCEESSCCHHH
T ss_pred HHHHHHH-cCCCeeCcCHHH
Confidence 5555433 467888876544
No 141
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=76.91 E-value=13 Score=25.12 Aligned_cols=60 Identities=17% Similarity=0.194 Sum_probs=48.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCC---------eEEEEEccCCCchHHHHHHHHHhhcCceEEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP---------YEIKILPPHQNCKEALSYALSAKERGIKIIIV 119 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~---------~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa 119 (202)
..-.|-.|+-+|..-++....-|...|++ |.|+| +...+.++..++.++....|++.+|.
T Consensus 8 ~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~~~~~~yRV~v-Gpf~~~~~A~~~~~~L~~~g~~~~iv 76 (79)
T 1x60_A 8 GLYKVQIGAFKVKANADSLASNAEAKGFDSIVLLKDGLYKVQI-GAFSSKDNADTLAARAKNAGFDAIVI 76 (79)
T ss_dssp CEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEEEETTEEEEEE-EEESSHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEecCCcEEEEEE-CCcCCHHHHHHHHHHHHHcCCceEEE
Confidence 56889999999999999999999998987 33444 45677888888888888778876664
No 142
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=76.82 E-value=9.4 Score=27.47 Aligned_cols=74 Identities=14% Similarity=0.098 Sum_probs=49.8
Q ss_pred CeEEEEecCC---CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc
Q 028883 59 PIVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 135 (202)
Q Consensus 59 ~~V~IimGS~---SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T 135 (202)
..|.|.+-++ ..=|+++++.+.|++.|++|+..=+. ..++...++.+ ..+..
T Consensus 18 ~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~--~~~~~~~~l~~-----------------------~~g~~ 72 (109)
T 3ipz_A 18 EKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNIL--ENEMLRQGLKE-----------------------YSNWP 72 (109)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGG--GCHHHHHHHHH-----------------------HHTCS
T ss_pred CCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHH-----------------------HHCCC
Confidence 4688887765 46789999999999999998865333 23333333322 13567
Q ss_pred CCcEEEecCCCCCCChhh-HHHhhc
Q 028883 136 QILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 136 ~~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
..|+|-+ .+...+|.| |..+.+
T Consensus 73 tvP~ifi--~g~~iGG~d~l~~l~~ 95 (109)
T 3ipz_A 73 TFPQLYI--GGEFFGGCDITLEAFK 95 (109)
T ss_dssp SSCEEEE--TTEEEECHHHHHHHHH
T ss_pred CCCeEEE--CCEEEeCHHHHHHHHH
Confidence 7888753 455678888 777654
No 143
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=76.52 E-value=14 Score=31.50 Aligned_cols=80 Identities=10% Similarity=0.040 Sum_probs=54.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc---CCCchHHHHHHHHHh-hcCceEEEEecCC----cCchhhh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---HQNCKEALSYALSAK-ERGIKIIIVGDGV----EAHLSGV 130 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa---HRtp~~l~~~~~~~~-~~g~~ViIa~AG~----aa~Lpgv 130 (202)
..+++.||... ++++.+.+-.+|..--+.|... |-.|....+.+..+. +.+.++|++++.- .+.+++.
T Consensus 58 ~V~av~~G~~~----~~~~lr~ala~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~ 133 (264)
T 1o97_C 58 EVVVVSVGPDR----VDESLRKCLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGIS 133 (264)
T ss_dssp EEEEEEESCGG----GHHHHHHHHHTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHH
T ss_pred eEEEEEeCchh----HHHHHHHHHhcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHH
Confidence 36788888644 3444444455799866666542 356776666555553 3468999998765 4889999
Q ss_pred hhhccCCcEEEe
Q 028883 131 AAANSQILVIRV 142 (202)
Q Consensus 131 vA~~T~~PVIgV 142 (202)
+|++...|.+.-
T Consensus 134 lA~~L~~~~vt~ 145 (264)
T 1o97_C 134 VASYLNWPHAAV 145 (264)
T ss_dssp HHHHHTCCEEEE
T ss_pred HHHHhCCCcccc
Confidence 999999998843
No 144
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=76.09 E-value=7.7 Score=34.82 Aligned_cols=81 Identities=12% Similarity=0.032 Sum_probs=56.5
Q ss_pred CeEEEEecCCC----CHHHHHHHHHHHHHhCCCeEEEEEccCC--------CchHHHHHHHHHhhcCceEEEEecCCcCc
Q 028883 59 PIVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPHQ--------NCKEALSYALSAKERGIKIIIVGDGVEAH 126 (202)
Q Consensus 59 ~~V~IimGS~S----D~~v~~~a~~~L~~~gi~~ev~V~SaHR--------tp~~l~~~~~~~~~~g~~ViIa~AG~aa~ 126 (202)
-+|+||+=|.. |....+.+.+.|+++|....+.= .+.+ --+|..++.+-+.+..+++|+++-|+.++
T Consensus 44 D~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~-~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGGyga 122 (371)
T 3tla_A 44 DTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGK-LTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNS 122 (371)
T ss_dssp CEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECT-TTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCCSCG
T ss_pred CEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECC-chhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 47999987754 66788999999999998654321 0111 12577788877777788999999998664
Q ss_pred ---hhh----hhhhccCCcEEE
Q 028883 127 ---LSG----VAAANSQILVIR 141 (202)
Q Consensus 127 ---Lpg----vvA~~T~~PVIg 141 (202)
||- .+. ..+++.||
T Consensus 123 ~rlLp~LD~~~i~-~~PK~fiG 143 (371)
T 3tla_A 123 NSLLPFLDYDAII-ANPKIIIG 143 (371)
T ss_dssp GGGGGGSCHHHHH-HSCCEEEE
T ss_pred HHHHhhcChhhHH-hCCcEEEE
Confidence 232 232 35677777
No 145
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=73.29 E-value=8.6 Score=27.43 Aligned_cols=52 Identities=4% Similarity=-0.102 Sum_probs=33.9
Q ss_pred CeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEec
Q 028883 87 PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 143 (202)
Q Consensus 87 ~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP 143 (202)
+++..+.. - +-...+.+.+++.+++.||.++-+. ..+.-+.-+++.||+-||
T Consensus 87 ~~~~~~~~--g--~~~~~I~~~a~~~~~dliV~G~~g~-sv~~~vl~~a~~PVlvv~ 138 (138)
T 1q77_A 87 IPGVEYRI--G--PLSEEVKKFVEGKGYELVVWACYPS-AYLCKVIDGLNLASLIVK 138 (138)
T ss_dssp CCCEEEEC--S--CHHHHHHHHHTTSCCSEEEECSCCG-GGTHHHHHHSSSEEEECC
T ss_pred cceEEEEc--C--CHHHHHHHHHHhcCCCEEEEeCCCC-chHHHHHHhCCCceEeeC
Confidence 56665543 2 2344566666677889888876544 455556677889998776
No 146
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=72.83 E-value=40 Score=28.06 Aligned_cols=86 Identities=13% Similarity=0.061 Sum_probs=53.4
Q ss_pred CCeEEEEecCCCC----HHHHHHHHHHHHHhCCCeEEEEEccCCCc---------hHHHHHHHHHhhcCceEEEEec---
Q 028883 58 APIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQNC---------KEALSYALSAKERGIKIIIVGD--- 121 (202)
Q Consensus 58 ~~~V~IimGS~SD----~~v~~~a~~~L~~~gi~~ev~V~SaHRtp---------~~l~~~~~~~~~~g~~ViIa~A--- 121 (202)
+.+|.||.||..- ...++.+.+.+++-|+ ++.+......| +.+.++.+...+ ++.||.+.
T Consensus 34 ~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~--eve~idL~~~pl~~~d~~~~d~~~~l~~~i~~--AD~iI~~sP~Y 109 (247)
T 2q62_A 34 RPRILILYGSLRTVSYSRLLAEEARRLLEFFGA--EVKVFDPSGLPLPDAAPVSHPKVQELRELSIW--SEGQVWVSPER 109 (247)
T ss_dssp CCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTC--EEEECCCTTCCCTTSSCTTSHHHHHHHHHHHH--CSEEEEEEECS
T ss_pred CCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCC--EEEEEEhhcCCCCcCCCCCCHHHHHHHHHHHH--CCEEEEEeCCC
Confidence 4689999999753 3456666777777776 56666665554 567777777666 66555554
Q ss_pred --CCcCchhhhhh----------hccCCcEEEecCCCC
Q 028883 122 --GVEAHLSGVAA----------ANSQILVIRVPLLSE 147 (202)
Q Consensus 122 --G~aa~LpgvvA----------~~T~~PVIgVP~~~~ 147 (202)
++.+.|=.++- .+..+|+.-+-+.++
T Consensus 110 n~sipa~LKn~iD~l~~~~~~~~~l~gK~v~~v~tsG~ 147 (247)
T 2q62_A 110 HGAMTGIMKAQIDWIPLSTGSIRPTQGKTLAVMQVSGG 147 (247)
T ss_dssp SSSCCHHHHHHHHTSCSCBTTBCSSTTCEEEEEEECSS
T ss_pred CCCccHHHHHHHHHhhhccCcccccCCCEEEEEEeCCC
Confidence 34444433332 235678877666543
No 147
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=72.72 E-value=13 Score=31.35 Aligned_cols=26 Identities=15% Similarity=0.063 Sum_probs=17.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
++|+||||+.+- +.+.+++.|-+-|.
T Consensus 9 gKvalVTGas~G--IG~aia~~la~~Ga 34 (255)
T 4g81_D 9 GKTALVTGSARG--LGFAYAEGLAAAGA 34 (255)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 688999998873 44555666666554
No 148
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=72.55 E-value=7.8 Score=33.85 Aligned_cols=69 Identities=7% Similarity=-0.064 Sum_probs=51.7
Q ss_pred EEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCc-hHHHHHHHHHhhcCceEEEEecCCcCc-hhhhhh
Q 028883 63 IIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGVEAH-LSGVAA 132 (202)
Q Consensus 63 IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp-~~l~~~~~~~~~~g~~ViIa~AG~aa~-LpgvvA 132 (202)
.|.-+.||.+.+++..+.+++.|+.++..+..++|++ +++.++++.+.+-|+++ |..++..+. .|.-+.
T Consensus 111 ~I~~~~s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~-i~l~DT~G~~~P~~v~ 181 (345)
T 1nvm_A 111 RVATHCTEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATC-IYMADSGGAMSMNDIR 181 (345)
T ss_dssp EEEEETTCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSE-EEEECTTCCCCHHHHH
T ss_pred EEEEeccHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCE-EEECCCcCccCHHHHH
Confidence 3345888889999999999999999999988888885 78999999998888763 344444332 254443
No 149
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=72.54 E-value=8 Score=33.70 Aligned_cols=37 Identities=19% Similarity=0.159 Sum_probs=26.1
Q ss_pred HHHHhhcCceEEEEecCCcCchhhhhhh-ccCCcEEEe
Q 028883 106 ALSAKERGIKIIIVGDGVEAHLSGVAAA-NSQILVIRV 142 (202)
Q Consensus 106 ~~~~~~~g~~ViIa~AG~aa~LpgvvA~-~T~~PVIgV 142 (202)
.+-..+...+++++..+....+++.+++ ....||+.+
T Consensus 104 ~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 104 QQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 3333444578999988877778866554 678899876
No 150
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=72.25 E-value=21 Score=31.34 Aligned_cols=79 Identities=15% Similarity=0.053 Sum_probs=56.1
Q ss_pred CeEEEEecCCC----CHHHHHHHHHHHHHhCCCeEEEEEccC--C--------CchHHHHHHHHHhhcCceEEEEecCCc
Q 028883 59 PIVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPH--Q--------NCKEALSYALSAKERGIKIIIVGDGVE 124 (202)
Q Consensus 59 ~~V~IimGS~S----D~~v~~~a~~~L~~~gi~~ev~V~SaH--R--------tp~~l~~~~~~~~~~g~~ViIa~AG~a 124 (202)
-+|+||+=|.. |....+.+.+.|+++|....+ +.| + --+|..++.+-+.+..+++|+++-|+.
T Consensus 14 D~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~---~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 90 (336)
T 3sr3_A 14 DTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILE---GSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGM 90 (336)
T ss_dssp CEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEE---CTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCCS
T ss_pred CEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEE---cccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 47999987764 567889999999999986544 222 1 125777887777777889999999986
Q ss_pred Cc---hhh----hhhhccCCcEEE
Q 028883 125 AH---LSG----VAAANSQILVIR 141 (202)
Q Consensus 125 a~---Lpg----vvA~~T~~PVIg 141 (202)
++ ||- .+. ..+++.+|
T Consensus 91 g~~rlL~~lD~~~i~-~~PK~~~G 113 (336)
T 3sr3_A 91 NSNSLLPYIDYDAFQ-NNPKIMIG 113 (336)
T ss_dssp CGGGGGGGSCHHHHH-HSCCEEEE
T ss_pred cHHHHhhhcChhHHh-hCCeEEEE
Confidence 54 232 232 25777777
No 151
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=72.25 E-value=23 Score=28.11 Aligned_cols=67 Identities=15% Similarity=0.100 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC-ch-----h---hhhhhccCCcEEEecC
Q 028883 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA-HL-----S---GVAAANSQILVIRVPL 144 (202)
Q Consensus 74 ~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa-~L-----p---gvvA~~T~~PVIgVP~ 144 (202)
.+++.+.++..|++++..+..- .| ...+.+. +.+++.||.++-+.+ .+ + .-+.-+++.||+-||.
T Consensus 76 l~~~~~~~~~~g~~~~~~~~~g--~~--~~~I~~~--~~~~dliV~G~~g~~~~~~~~~~Gs~~~~v~~~a~~PVlvv~~ 149 (268)
T 3ab8_A 76 LERVRQSALAAGVAVEAVLEEG--VP--HEAILRR--ARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPG 149 (268)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEE--CH--HHHHHHH--HTTCSEEEEESSCTTSCTTCCSCCHHHHHHHHHCSSCEEEECS
T ss_pred HHHHHHHHHhCCCCeEEEEecC--CH--HHHHHhh--ccCCCEEEEeccCCCccccccccchhHHHHHHhCCCCEEEECC
Confidence 3444555666799988776532 22 2333333 567888888765443 33 2 2344568999999996
Q ss_pred CC
Q 028883 145 LS 146 (202)
Q Consensus 145 ~~ 146 (202)
..
T Consensus 150 ~~ 151 (268)
T 3ab8_A 150 EP 151 (268)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 152
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=71.72 E-value=15 Score=31.95 Aligned_cols=82 Identities=13% Similarity=0.114 Sum_probs=57.2
Q ss_pred CeEEEEecCC----CCHHHHHHHHHHHHHhCCCeEEEEEccCC-------Cc-hHHHHHHHHHhhcCceEEEEecCCcCc
Q 028883 59 PIVGIIMESD----LDLPVMNDAARTLSDFGVPYEIKILPPHQ-------NC-KEALSYALSAKERGIKIIIVGDGVEAH 126 (202)
Q Consensus 59 ~~V~IimGS~----SD~~v~~~a~~~L~~~gi~~ev~V~SaHR-------tp-~~l~~~~~~~~~~g~~ViIa~AG~aa~ 126 (202)
-+|+||+=|. .+-+..+.+.+.|+++|....+.= .+.+ ++ +|..++.+-+.+..++.|+++-|+.+.
T Consensus 13 D~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~-~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 91 (327)
T 4h1h_A 13 DEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGE-HVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNS 91 (327)
T ss_dssp CEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECT-TTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred CEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECc-chhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCchhH
Confidence 4899997664 366788999999999998554321 0111 22 577888877777788999999999765
Q ss_pred ---hh----hhhhhccCCcEEEe
Q 028883 127 ---LS----GVAAANSQILVIRV 142 (202)
Q Consensus 127 ---Lp----gvvA~~T~~PVIgV 142 (202)
|| -.+. .-+++++|.
T Consensus 92 ~rlL~~LD~~~i~-~~PK~~~Gy 113 (327)
T 4h1h_A 92 NQLLPYLDYDLIS-ENPKILCGF 113 (327)
T ss_dssp GGGGGGCCHHHHH-HSCCEEEEC
T ss_pred HHHhhhcchhhhc-cCCeEEEec
Confidence 33 2443 357888873
No 153
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=71.63 E-value=14 Score=31.70 Aligned_cols=37 Identities=27% Similarity=0.285 Sum_probs=29.1
Q ss_pred CCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecC
Q 028883 85 GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (202)
Q Consensus 85 gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG 122 (202)
++|.-+++. ..-+.+.+.++++.+++.|++.|++..+
T Consensus 211 ~~Pv~vKi~-~~~~~~~~~~~a~~l~~~Gvd~i~vsn~ 247 (336)
T 1f76_A 211 YVPIAVKIA-PDLSEEELIQVADSLVRHNIDGVIATNT 247 (336)
T ss_dssp CCCEEEECC-SCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred cCceEEEec-CCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 789888864 5556678889999999999998887643
No 154
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=71.43 E-value=16 Score=26.74 Aligned_cols=71 Identities=11% Similarity=0.214 Sum_probs=49.2
Q ss_pred eEEEEecC---CCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhc--
Q 028883 60 IVGIIMES---DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN-- 134 (202)
Q Consensus 60 ~V~IimGS---~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~-- 134 (202)
+|.+++|+ +| -.+++..+.+++.|+++++.-++..-..+.+ + ++++|+.+.-..-.+.-+-.-.
T Consensus 5 kIll~Cg~G~sTS--~l~~k~~~~~~~~gi~~~i~a~~~~~~~~~~----~-----~~Dvil~~pqv~~~~~~~~~~~~~ 73 (106)
T 1e2b_A 5 HIYLFSSAGMSTS--LLVSKMRAQAEKYEVPVIIEAFPETLAGEKG----Q-----NADVVLLGPQIAYMLPEIQRLLPN 73 (106)
T ss_dssp EEEEECSSSTTTH--HHHHHHHHHHHHSCCSEEEEEECSSSTTHHH----H-----HCSEEEECTTSGGGHHHHHHHSSS
T ss_pred EEEEECCCchhHH--HHHHHHHHHHHHCCCCeEEEEecHHHHHhhc----c-----CCCEEEEccchhhhHHHHHHHhcC
Confidence 57777763 55 5888999999999999999888877666543 2 2588988776665555554421
Q ss_pred cCCcEEE
Q 028883 135 SQILVIR 141 (202)
Q Consensus 135 T~~PVIg 141 (202)
.+.|||.
T Consensus 74 ~~v~vI~ 80 (106)
T 1e2b_A 74 KPVEVID 80 (106)
T ss_dssp SCCCBCC
T ss_pred CCceEEC
Confidence 3455543
No 155
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=71.43 E-value=21 Score=25.27 Aligned_cols=63 Identities=11% Similarity=0.169 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCC---eEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchh--------hhhhhccCCcEEEec
Q 028883 76 DAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLS--------GVAAANSQILVIRVP 143 (202)
Q Consensus 76 ~a~~~L~~~gi~---~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lp--------gvvA~~T~~PVIgVP 143 (202)
+..+.++++|++ ++..+..- .| ..++.+.+++.+++.||.++-+ ..+. .-+.-+++.||+-||
T Consensus 70 ~l~~~~~~~~~~~~~v~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~~-~~~~~~~~Gs~~~~v~~~~~~pVlvv~ 143 (143)
T 3fdx_A 70 QLKEIAKKFSIPEDRMHFHVAEG--SP--KDKILALAKSLPADLVIIASHR-PDITTYLLGSNAAAVVRHAECSVLVVR 143 (143)
T ss_dssp HHHHHHTTSCCCGGGEEEEEEES--CH--HHHHHHHHHHTTCSEEEEESSC-TTCCSCSSCHHHHHHHHHCSSEEEEEC
T ss_pred HHHHHHHHcCCCCCceEEEEEec--Ch--HHHHHHHHHHhCCCEEEEeCCC-CCCeeeeeccHHHHHHHhCCCCEEEeC
Confidence 344455567765 35555432 22 3455566666788988888864 3222 223456889998876
No 156
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=70.65 E-value=20 Score=29.73 Aligned_cols=60 Identities=10% Similarity=0.061 Sum_probs=45.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhh--------------cCceEEEEecCCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--------------RGIKIIIVGDGVE 124 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~--------------~g~~ViIa~AG~a 124 (202)
++.++|.|. . ...+.++..|.+.| +++.|+ +|++++..++.+++.. .+++++|..+|..
T Consensus 119 ~k~vlViGa-G--g~g~a~a~~L~~~G--~~V~v~--~R~~~~~~~la~~~~~~~~~~~~~~~~~~~~~~DivVn~t~~~ 191 (271)
T 1nyt_A 119 GLRILLIGA-G--GASRGVLLPLLSLD--CAVTIT--NRTVSRAEELAKLFAHTGSIQALSMDELEGHEFDLIINATSSG 191 (271)
T ss_dssp TCEEEEECC-S--HHHHHHHHHHHHTT--CEEEEE--CSSHHHHHHHHHHTGGGSSEEECCSGGGTTCCCSEEEECCSCG
T ss_pred CCEEEEECC-c--HHHHHHHHHHHHcC--CEEEEE--ECCHHHHHHHHHHhhccCCeeEecHHHhccCCCCEEEECCCCC
Confidence 456777787 3 68889999999999 466665 7999999988876422 2578999888864
Q ss_pred C
Q 028883 125 A 125 (202)
Q Consensus 125 a 125 (202)
.
T Consensus 192 ~ 192 (271)
T 1nyt_A 192 I 192 (271)
T ss_dssp G
T ss_pred C
Confidence 4
No 157
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=70.11 E-value=23 Score=25.15 Aligned_cols=62 Identities=13% Similarity=0.140 Sum_probs=38.5
Q ss_pred HHHHHhCCCe-EEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh------hhhhccCCcEEEecCC
Q 028883 79 RTLSDFGVPY-EIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG------VAAANSQILVIRVPLL 145 (202)
Q Consensus 79 ~~L~~~gi~~-ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg------vvA~~T~~PVIgVP~~ 145 (202)
+.++++|+++ +..+..- .| ...+++.+++.+++.||.++- .+.+.. -+.-+++.||+-||..
T Consensus 71 ~~~~~~~~~~~~~~~~~g--~~--~~~I~~~a~~~~~dliV~G~~-~~~~~~lgs~~~~vl~~~~~pVlvv~~~ 139 (141)
T 1jmv_A 71 DLAESVDYPISEKLSGSG--DL--GQVLSDAIEQYDVDLLVTGHH-QDFWSKLMSSTRQVMNTIKIDMLVVPLR 139 (141)
T ss_dssp HHHHHSSSCCCCEEEEEE--CH--HHHHHHHHHHTTCCEEEEEEC-CCCHHHHHHHHHHHHTTCCSEEEEEECC
T ss_pred HHHHHcCCCceEEEEecC--CH--HHHHHHHHHhcCCCEEEEeCC-CchhhhhcchHHHHHhcCCCCEEEeeCC
Confidence 3445678886 4444321 22 344555566678898888877 555443 2334678999999864
No 158
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=70.01 E-value=3.4 Score=34.86 Aligned_cols=64 Identities=13% Similarity=0.114 Sum_probs=39.0
Q ss_pred eEEEEecCCC-CHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhc----
Q 028883 60 IVGIIMESDL-DLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN---- 134 (202)
Q Consensus 60 ~V~IimGS~S-D~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~---- 134 (202)
+++||.=.+. -....++..+.|++.|+.++ .++++++|++ |+.+.+-.++-..
T Consensus 2 ki~ii~n~~~~~~~~~~~l~~~l~~~g~~v~---------------------~~~~D~vv~l-GGDGT~l~aa~~~~~~~ 59 (272)
T 2i2c_A 2 KYMITSKGDEKSDLLRLNMIAGFGEYDMEYD---------------------DVEPEIVISI-GGDGTFLSAFHQYEERL 59 (272)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSSCEEC---------------------SSSCSEEEEE-ESHHHHHHHHHHTGGGT
T ss_pred EEEEEECCCHHHHHHHHHHHHHHHHCCCEeC---------------------CCCCCEEEEE-cCcHHHHHHHHHHhhcC
Confidence 4566654221 13456667777788887652 2457877765 5555555554443
Q ss_pred cCCcEEEecCC
Q 028883 135 SQILVIRVPLL 145 (202)
Q Consensus 135 T~~PVIgVP~~ 145 (202)
...||+|+|+-
T Consensus 60 ~~~PilGIn~G 70 (272)
T 2i2c_A 60 DEIAFIGIHTG 70 (272)
T ss_dssp TTCEEEEEESS
T ss_pred CCCCEEEEeCC
Confidence 37899999863
No 159
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=69.95 E-value=7.2 Score=34.25 Aligned_cols=39 Identities=13% Similarity=0.065 Sum_probs=26.7
Q ss_pred HHHHHhhcCceEEEEecCCcCchhhhhh-hccCCcEEEec
Q 028883 105 YALSAKERGIKIIIVGDGVEAHLSGVAA-ANSQILVIRVP 143 (202)
Q Consensus 105 ~~~~~~~~g~~ViIa~AG~aa~LpgvvA-~~T~~PVIgVP 143 (202)
+.+-.++...+++++..+....+++.++ .....||+.+-
T Consensus 106 l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 106 INEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 3344444557899988777777875544 46889998765
No 160
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=69.88 E-value=40 Score=26.87 Aligned_cols=102 Identities=7% Similarity=0.026 Sum_probs=57.4
Q ss_pred CCCeEEEEecCCCCHHHHHH----HHH----HHHHhCCCeEEEEEccCC-------------CchHHHHHHHHHhhcCce
Q 028883 57 DAPIVGIIMESDLDLPVMND----AAR----TLSDFGVPYEIKILPPHQ-------------NCKEALSYALSAKERGIK 115 (202)
Q Consensus 57 ~~~~V~IimGS~SD~~v~~~----a~~----~L~~~gi~~ev~V~SaHR-------------tp~~l~~~~~~~~~~g~~ 115 (202)
...+|.+|.||...-..-.. +.+ .|++-|-..++.+..... .++.+.++.++..+ ++
T Consensus 10 ~~~~il~i~GS~r~~S~t~~La~~~~~~~~~~l~~~~~g~eve~idL~d~~l~~~~~~~~~~~~~~~~~~~~~i~~--AD 87 (191)
T 3k1y_A 10 HMRTLAVISAGLSTPSSTRQIADSISEAVTAAVSARGEALSVSTIELSELIPDLMTAMTTRVHTTKLEEITSALSA--SD 87 (191)
T ss_dssp CSEEEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCHHHHTTTTSSSCCCHHHHHHHHHHHH--CS
T ss_pred hhceEEEEECCCCCCCHHHHHHHHHHHHhHHHHHhcCCCceEEEEEHHhCCCcccChhhcCCCCHHHHHHHHHHHH--CC
Confidence 34689999999987544433 333 344443233444443322 34777788887766 66
Q ss_pred EEEEec-----CCcCchhhhh-----hhccCCcEEEecCCCCCCCh------hh-HHHhhcC
Q 028883 116 IIIVGD-----GVEAHLSGVA-----AANSQILVIRVPLLSEDWSE------DD-VINSIRM 160 (202)
Q Consensus 116 ViIa~A-----G~aa~Lpgvv-----A~~T~~PVIgVP~~~~~l~G------~D-LlS~vqM 160 (202)
.||.++ ++.+.|=.++ ..+..+||.-+-+.++.-.. +. ++..+.|
T Consensus 88 ~ivi~sP~Y~~~~~~~lK~~iD~~~~~~l~gK~~~~v~t~G~~~~~~~~~~~L~~il~~lg~ 149 (191)
T 3k1y_A 88 GLVVATPVFKASYTGLFKMFFDILDTDALTGMPTIIAATAGSARHSLVLDYALRPLLSYMRA 149 (191)
T ss_dssp EEEEEEECBTTBSCHHHHHHHHHSCTTTTTTCEEEEEEEESSSTTTTHHHHTHHHHHHHTTC
T ss_pred EEEEEcCccCCcCcHHHHHHHHHhhhhhcCCCEEEEEEeCCCcchhhHHHHHHHHHHHHCCC
Confidence 666554 4444444444 24567888766654432222 34 5666665
No 161
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=69.53 E-value=24 Score=29.72 Aligned_cols=125 Identities=15% Similarity=0.231 Sum_probs=67.4
Q ss_pred CCCeEEEEecCC----CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchH---------------HHHHHHHHhhcCceEE
Q 028883 57 DAPIVGIIMESD----LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKE---------------ALSYALSAKERGIKII 117 (202)
Q Consensus 57 ~~~~V~IimGS~----SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~---------------l~~~~~~~~~~g~~Vi 117 (202)
+.+.|.|..||. .......++.+.|++.++ ++-+..-....+. +.+++ ..++++
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~--~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~~ll-----~~ad~~ 303 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDA--DFVLALGDLDISPLGTLPRNVRAVGWTPLHTLL-----RTCTAV 303 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSS--EEEEECTTSCCGGGCSCCTTEEEESSCCHHHHH-----TTCSEE
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCC--EEEEEECCcChhhhccCCCcEEEEccCCHHHHH-----hhCCEE
Confidence 345666666665 256678888888887754 4444332221111 23333 237899
Q ss_pred EEecCCcCchhhhhhhccCCcEEEecCCCCCCChh--hHHHhhcCCCCCeeeEEecCC-hhhHHHHHHHHHccCCHHHHH
Q 028883 118 IVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSED--DVINSIRMPSHVQVASVPRNN-AKNAALYAVKVLGIADEDLLE 194 (202)
Q Consensus 118 Ia~AG~aa~LpgvvA~~T~~PVIgVP~~~~~l~G~--DLlS~vqMP~GvpVatV~I~n-~~NAAl~Aa~IL~~~d~~l~~ 194 (202)
|.=+|...- .=|...-+|+|.+|.......-- +.+. + .|.. .+ +.. ..++..++ ++|. |+++++
T Consensus 304 v~~~G~~t~---~Eal~~G~P~v~~p~~~dq~~~a~~~~~~--~--~g~g--~~-~~~~~~~~~~l~-~ll~--~~~~~~ 370 (398)
T 3oti_A 304 VHHGGGGTV---MTAIDAGIPQLLAPDPRDQFQHTAREAVS--R--RGIG--LV-STSDKVDADLLR-RLIG--DESLRT 370 (398)
T ss_dssp EECCCHHHH---HHHHHHTCCEEECCCTTCCSSCTTHHHHH--H--HTSE--EE-CCGGGCCHHHHH-HHHH--CHHHHH
T ss_pred EECCCHHHH---HHHHHhCCCEEEcCCCchhHHHHHHHHHH--H--CCCE--Ee-eCCCCCCHHHHH-HHHc--CHHHHH
Confidence 975554322 22334678999999854322222 3111 1 2442 22 332 22455555 7764 788888
Q ss_pred HHHHHHh
Q 028883 195 RIRKYVE 201 (202)
Q Consensus 195 kl~~~~~ 201 (202)
++++.++
T Consensus 371 ~~~~~~~ 377 (398)
T 3oti_A 371 AAREVRE 377 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876653
No 162
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=69.42 E-value=23 Score=29.57 Aligned_cols=126 Identities=9% Similarity=0.117 Sum_probs=66.0
Q ss_pred CCCeEEEEecCC--CCHHHHHHHHHHHHHhCCCeEEEEEccCCC--------ch--------HHHHHHHHHhhcCceEEE
Q 028883 57 DAPIVGIIMESD--LDLPVMNDAARTLSDFGVPYEIKILPPHQN--------CK--------EALSYALSAKERGIKIII 118 (202)
Q Consensus 57 ~~~~V~IimGS~--SD~~v~~~a~~~L~~~gi~~ev~V~SaHRt--------p~--------~l~~~~~~~~~~g~~ViI 118 (202)
+.+.|.+..|+. .......++.+.|++.++. +-+..-... ++ .+.++. .. ++++|
T Consensus 241 ~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~--~~~~~g~~~~~~~l~~~~~~v~~~~~~~~~~~l---~~--ad~~v 313 (412)
T 3otg_A 241 ARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDAD--VLVASGPSLDVSGLGEVPANVRLESWVPQAALL---PH--VDLVV 313 (412)
T ss_dssp TSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSE--EEEECCSSCCCTTCCCCCTTEEEESCCCHHHHG---GG--CSEEE
T ss_pred CCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCE--EEEEECCCCChhhhccCCCcEEEeCCCCHHHHH---hc--CcEEE
Confidence 446677777776 5777888888888877543 322221111 11 123332 22 68888
Q ss_pred EecCCcCchhhhhhhccCCcEEEecCCCCCCChh-hHHHhhcCCCCCeeeEEecC-ChhhHHHHHHHHHcc-CCHHHHHH
Q 028883 119 VGDGVEAHLSGVAAANSQILVIRVPLLSEDWSED-DVINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-ADEDLLER 195 (202)
Q Consensus 119 a~AG~aa~LpgvvA~~T~~PVIgVP~~~~~l~G~-DLlS~vqMP~GvpVatV~I~-n~~NAAl~Aa~IL~~-~d~~l~~k 195 (202)
.-+|...- .=|...-+|||.+|.... ..+. +.+.- .|. +.+ +. +..++.-++..|..+ .|++++++
T Consensus 314 ~~~g~~t~---~Ea~a~G~P~v~~p~~~~-q~~~~~~v~~----~g~--g~~-~~~~~~~~~~l~~ai~~ll~~~~~~~~ 382 (412)
T 3otg_A 314 HHGGSGTT---LGALGAGVPQLSFPWAGD-SFANAQAVAQ----AGA--GDH-LLPDNISPDSVSGAAKRLLAEESYRAG 382 (412)
T ss_dssp ESCCHHHH---HHHHHHTCCEEECCCSTT-HHHHHHHHHH----HTS--EEE-CCGGGCCHHHHHHHHHHHHHCHHHHHH
T ss_pred ECCchHHH---HHHHHhCCCEEecCCchh-HHHHHHHHHH----cCC--EEe-cCcccCCHHHHHHHHHHHHhCHHHHHH
Confidence 76653221 223446799999998632 2122 12221 233 222 22 222444444444433 57888888
Q ss_pred HHHHH
Q 028883 196 IRKYV 200 (202)
Q Consensus 196 l~~~~ 200 (202)
+.+.+
T Consensus 383 ~~~~~ 387 (412)
T 3otg_A 383 ARAVA 387 (412)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76544
No 163
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=69.29 E-value=7.5 Score=29.43 Aligned_cols=75 Identities=13% Similarity=0.080 Sum_probs=52.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHH---hCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSD---FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 135 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~---~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T 135 (202)
..|.|.+- +-=|.+.++.+.|++ +|++|++.=+..+-.++.+.+++++. .+..
T Consensus 14 ~~Vvvysk--~~Cp~C~~ak~lL~~~~~~~v~~~~idid~~~d~~~~~~~l~~~----------------------~G~~ 69 (127)
T 3l4n_A 14 SPIIIFSK--STCSYSKGMKELLENEYQFIPNYYIIELDKHGHGEELQEYIKLV----------------------TGRG 69 (127)
T ss_dssp CSEEEEEC--TTCHHHHHHHHHHHHHEEEESCCEEEEGGGSTTHHHHHHHHHHH----------------------HSCC
T ss_pred CCEEEEEc--CCCccHHHHHHHHHHhcccCCCcEEEEecCCCCHHHHHHHHHHH----------------------cCCC
Confidence 34777765 557999999999998 48888876666666666777766532 2457
Q ss_pred CCcEEEecCCCCCCChhh-HHHhhc
Q 028883 136 QILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 136 ~~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
+.|+|=+ .+...+|.| |..+-+
T Consensus 70 tVP~IfI--~G~~IGG~ddl~~l~~ 92 (127)
T 3l4n_A 70 TVPNLLV--NGVSRGGNEEIKKLHT 92 (127)
T ss_dssp SSCEEEE--TTEECCCHHHHHHHHH
T ss_pred CcceEEE--CCEEEcCHHHHHHHHH
Confidence 8888853 455567777 666544
No 164
>4eys_A MCCC family protein; MCCF like, serine peptidase, csgid, structural genomics, NIA national institute of allergy and infectious diseases; HET: AMP; 1.58A {Streptococcus pneumoniae} PDB: 4e94_A*
Probab=68.73 E-value=21 Score=31.43 Aligned_cols=82 Identities=15% Similarity=0.108 Sum_probs=54.3
Q ss_pred CeEEEEecCCC------CHHHHHHHHHHHHHhCCCeEEEEEccCCC--------chHHHHHHHHHhhcCceEEEEecCCc
Q 028883 59 PIVGIIMESDL------DLPVMNDAARTLSDFGVPYEIKILPPHQN--------CKEALSYALSAKERGIKIIIVGDGVE 124 (202)
Q Consensus 59 ~~V~IimGS~S------D~~v~~~a~~~L~~~gi~~ev~V~SaHRt--------p~~l~~~~~~~~~~g~~ViIa~AG~a 124 (202)
-+|+||+=|.. +..-.+.+.+.|+++|....+. -.+.+. -+|..++.+-+.+..+++|+++-|+.
T Consensus 6 D~I~ivaPSs~~~~~~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG~ 84 (346)
T 4eys_A 6 STIGIVSLSSGIIGEDFVKHEVDLGIQRLKDLGLNPIFL-PHSLKGLDFIKDHPEARAEDLIHAFSDDSIDMILCAIGGD 84 (346)
T ss_dssp CEEEEECSSCCGGGSGGGHHHHHHHHHHHHHTTCEEEEC-TTTTSCHHHHHHCHHHHHHHHHHHHHCTTCCEEEECCCCS
T ss_pred cEEEEEeCCCcccccccCHHHHHHHHHHHHhCCCEEEEC-CchhccCCccCCCHHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 47999985543 3567899999999999854432 022232 35777777777777889999999986
Q ss_pred Cc---hhhhh------hhccCCcEEE
Q 028883 125 AH---LSGVA------AANSQILVIR 141 (202)
Q Consensus 125 a~---Lpgvv------A~~T~~PVIg 141 (202)
+. ||-.. ...-+++.+|
T Consensus 85 g~~rlLp~L~d~~~~~~~~~~K~~iG 110 (346)
T 4eys_A 85 DTYRLLPYLFENDQLQKVIKQKIFLG 110 (346)
T ss_dssp CGGGGHHHHHTTSHHHHHCCCCEEEE
T ss_pred CHHHHHHHhhchhhhhHhhCCcEEEE
Confidence 54 44431 1112577777
No 165
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=68.26 E-value=24 Score=25.95 Aligned_cols=72 Identities=11% Similarity=0.179 Sum_probs=50.7
Q ss_pred CeEEEEecCCCCHHH--HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc-
Q 028883 59 PIVGIIMESDLDLPV--MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS- 135 (202)
Q Consensus 59 ~~V~IimGS~SD~~v--~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T- 135 (202)
.+|.+++|+--=-.. +++..+.+++.|+++++..++....++.. ..+|+||...-.. ...
T Consensus 22 kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~~~~~~~~~~~---------~~~DlIist~~l~--------~~~~ 84 (113)
T 1tvm_A 22 RKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYM---------DGVHLICTTARVD--------RSFG 84 (113)
T ss_dssp EEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEEECTTTTTTST---------TSCSEEEESSCCC--------CCST
T ss_pred cEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEEecHHHHhhcc---------CCCCEEEECCccc--------cccC
Confidence 479999988766655 58899999999999999888887765521 2478998866544 112
Q ss_pred CCcEEE-ecCCCC
Q 028883 136 QILVIR-VPLLSE 147 (202)
Q Consensus 136 ~~PVIg-VP~~~~ 147 (202)
..||+- .|....
T Consensus 85 ~ipvi~v~~~l~~ 97 (113)
T 1tvm_A 85 DIPLVHGMPFVSG 97 (113)
T ss_dssp TCCEECCHHHHHS
T ss_pred CCCEEEEeecccc
Confidence 567776 444443
No 166
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=67.93 E-value=53 Score=27.50 Aligned_cols=128 Identities=13% Similarity=0.136 Sum_probs=66.4
Q ss_pred CCCCeEEEEecCC--CCHHHHHHHHHHHHHhCCCeEEEEE-ccCCCchHH---------------HHHHHHHhhcCceEE
Q 028883 56 TDAPIVGIIMESD--LDLPVMNDAARTLSDFGVPYEIKIL-PPHQNCKEA---------------LSYALSAKERGIKII 117 (202)
Q Consensus 56 ~~~~~V~IimGS~--SD~~v~~~a~~~L~~~gi~~ev~V~-SaHRtp~~l---------------~~~~~~~~~~g~~Vi 117 (202)
.+.+.|.|..||. .+....+++.+.|++++ +.+-+. +-....+.+ .+++.. ++++
T Consensus 245 ~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~--~~~v~~~g~~~~~~~l~~~~~~v~~~~~~~~~~ll~~-----ad~~ 317 (415)
T 3rsc_A 245 DDLPVVLVSLGTTFNDRPGFFRDCARAFDGQP--WHVVMTLGGQVDPAALGDLPPNVEAHRWVPHVKVLEQ-----ATVC 317 (415)
T ss_dssp SCCCEEEEECTTTSCCCHHHHHHHHHHHTTSS--CEEEEECTTTSCGGGGCCCCTTEEEESCCCHHHHHHH-----EEEE
T ss_pred CCCCEEEEECCCCCCChHHHHHHHHHHHhcCC--cEEEEEeCCCCChHHhcCCCCcEEEEecCCHHHHHhh-----CCEE
Confidence 3446788877874 24456777777777666 454442 221111111 133322 6898
Q ss_pred EEecCCcCchhhhhhhccCCcEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecC-ChhhHHHHHHHHHcc-CCHHHHH
Q 028883 118 IVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-ADEDLLE 194 (202)
Q Consensus 118 Ia~AG~aa~LpgvvA~~T~~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~-n~~NAAl~Aa~IL~~-~d~~l~~ 194 (202)
|.-+|...- .=|...-+|+|.+|.... ..... .+. + .|+. .+ +. +..++.-++..|..+ .|+++++
T Consensus 318 v~~~G~~t~---~Ea~~~G~P~v~~p~~~~-q~~~a~~l~--~--~g~g--~~-~~~~~~~~~~l~~~i~~ll~~~~~~~ 386 (415)
T 3rsc_A 318 VTHGGMGTL---MEALYWGRPLVVVPQSFD-VQPMARRVD--Q--LGLG--AV-LPGEKADGDTLLAAVGAVAADPALLA 386 (415)
T ss_dssp EESCCHHHH---HHHHHTTCCEEECCCSGG-GHHHHHHHH--H--HTCE--EE-CCGGGCCHHHHHHHHHHHHTCHHHHH
T ss_pred EECCcHHHH---HHHHHhCCCEEEeCCcch-HHHHHHHHH--H--cCCE--EE-cccCCCCHHHHHHHHHHHHcCHHHHH
Confidence 887764322 223347789999997432 11111 222 2 2442 22 22 222444444444443 5788888
Q ss_pred HHHHHHh
Q 028883 195 RIRKYVE 201 (202)
Q Consensus 195 kl~~~~~ 201 (202)
++++.++
T Consensus 387 ~~~~~~~ 393 (415)
T 3rsc_A 387 RVEAMRG 393 (415)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8876543
No 167
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=67.87 E-value=48 Score=27.19 Aligned_cols=81 Identities=11% Similarity=0.058 Sum_probs=52.9
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEE--EccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhc-
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKI--LPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN- 134 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V--~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~- 134 (202)
..+|+.|.|..... -.+--.+.+++.|.+ ++.+ .+.+-.++.-.+.++++-+++.++|++.++..+ + |++.+.
T Consensus 126 ~~~Ig~i~g~~~~~-r~~Gf~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~D~~a-~-Gv~~a~~ 201 (296)
T 2hqb_A 126 THKVGVIAAFPWQP-EVEGFVDGAKYMNES-EAFVRYVGEWTDADKALELFQELQKEQVDVFYPAGDGYH-V-PVVEAIK 201 (296)
T ss_dssp SSEEEEEESCTTCH-HHHHHHHHHHHTTCC-EEEEEECSSSSCHHHHHHHHHHHHTTTCCEEECCCTTTH-H-HHHHHHH
T ss_pred CCeEEEEcCcCchh-hHHHHHHHHHHhCCC-eEEEEeeccccCHHHHHHHHHHHHHCCCcEEEECCCCCC-H-HHHHHHH
Confidence 47899999976554 555556778889987 6543 334456776667776666677999998877643 2 333222
Q ss_pred -cCCcEEEe
Q 028883 135 -SQILVIRV 142 (202)
Q Consensus 135 -T~~PVIgV 142 (202)
..+-|||+
T Consensus 202 e~Gv~viG~ 210 (296)
T 2hqb_A 202 DQGDFAIGY 210 (296)
T ss_dssp HHTCEEEEE
T ss_pred HcCCEEEEE
Confidence 22567775
No 168
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=67.80 E-value=25 Score=28.84 Aligned_cols=67 Identities=13% Similarity=0.140 Sum_probs=42.4
Q ss_pred HHHHHHHHHHh-----CCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh--------hhhhccCCcEE
Q 028883 74 MNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--------VAAANSQILVI 140 (202)
Q Consensus 74 ~~~a~~~L~~~-----gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg--------vvA~~T~~PVI 140 (202)
++++.+.+++. |++++..+..- .| ...+.+.++ +++.||.++-+.+.+.. -+.-+++.||+
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~~~g--~~--~~~I~~~a~--~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVl 157 (309)
T 3cis_A 84 IDDALKVVEQASLRAGPPTVHSEIVPA--AA--VPTLVDMSK--DAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVV 157 (309)
T ss_dssp HHHHHHHHHHHCSSSCCSCEEEEEESS--CH--HHHHHHHGG--GEEEEEEESSCTTCCTTCCSCHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHhcccCCCceEEEEEecC--CH--HHHHHHHhc--CCCEEEECCCCCccccccccCcHHHHHHHhCCCCEE
Confidence 44555566665 89988877632 22 334444443 58988888765544332 23456899999
Q ss_pred EecCCC
Q 028883 141 RVPLLS 146 (202)
Q Consensus 141 gVP~~~ 146 (202)
-||...
T Consensus 158 vv~~~~ 163 (309)
T 3cis_A 158 IIHDED 163 (309)
T ss_dssp EECTTC
T ss_pred EEcCCc
Confidence 999764
No 169
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=66.93 E-value=9 Score=31.20 Aligned_cols=68 Identities=13% Similarity=0.193 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhCCCeEE-EEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh--------hhhccCCcEEEecC
Q 028883 74 MNDAARTLSDFGVPYEI-KILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVPL 144 (202)
Q Consensus 74 ~~~a~~~L~~~gi~~ev-~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv--------vA~~T~~PVIgVP~ 144 (202)
.+++.+.++..|++++. .+.. +-.|.+.. .+++++++.||.+.-+...+... +...++.||+-||.
T Consensus 88 l~~~~~~~~~~g~~~~~~~v~~-~g~~~~~I----~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~~PVlvv~~ 162 (294)
T 3loq_A 88 LPEVAQKIEAAGIKAEVIKPFP-AGDPVVEI----IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSKVPVYIFKH 162 (294)
T ss_dssp HHHHHHHHHHTTCEEEECSSCC-EECHHHHH----HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCSSCEEEECC
T ss_pred HHHHHHHHHHcCCCcceeEeec-cCChhHhe----eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCCCCEEEecC
Confidence 34455556667888776 4441 22343333 44567789888887766665443 34567899999997
Q ss_pred CC
Q 028883 145 LS 146 (202)
Q Consensus 145 ~~ 146 (202)
..
T Consensus 163 ~~ 164 (294)
T 3loq_A 163 DM 164 (294)
T ss_dssp CT
T ss_pred cc
Confidence 64
No 170
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=66.51 E-value=24 Score=27.40 Aligned_cols=75 Identities=15% Similarity=0.050 Sum_probs=43.6
Q ss_pred CCCeEEEEecCCC------------CHHHHHHHHHHHHHhCCCe-EEEEEccCCCchHHHHHHHHHh-hcCceEEEEecC
Q 028883 57 DAPIVGIIMESDL------------DLPVMNDAARTLSDFGVPY-EIKILPPHQNCKEALSYALSAK-ERGIKIIIVGDG 122 (202)
Q Consensus 57 ~~~~V~IimGS~S------------D~~v~~~a~~~L~~~gi~~-ev~V~SaHRtp~~l~~~~~~~~-~~g~~ViIa~AG 122 (202)
+..+|+||+-|++ |.. ..-.++.|+++|+.. +.+++. =.++.+.+-++++. .+.+++||+..|
T Consensus 14 ~~~~v~iitvsd~~~~~~~~~g~i~D~n-g~~L~~~L~~~G~~v~~~~iV~--Dd~~~i~~al~~~~a~~~~DlVittGG 90 (178)
T 3iwt_A 14 KSLNFYVITISTSRYEKLLKKEPIVDES-GDIIKQLLIENGHKIIGYSLVP--DDKIKILKAFTDALSIDEVDVIISTGG 90 (178)
T ss_dssp CCCEEEEEEECHHHHHHHHTTCCCCCHH-HHHHHHHHHHTTCEEEEEEEEC--SCHHHHHHHHHHHHTCTTCCEEEEESC
T ss_pred CCCEEEEEEEcCCCccccccCCCCCcch-HHHHHHHHHHCCCEEEEEEEeC--CCHHHHHHHHHHHHhcCCCCEEEecCC
Confidence 4468999998763 321 233678889999874 334432 23344444444332 345799998888
Q ss_pred CcCc----hhhhhhhc
Q 028883 123 VEAH----LSGVAAAN 134 (202)
Q Consensus 123 ~aa~----LpgvvA~~ 134 (202)
.+-. .+-+++..
T Consensus 91 ~g~~~~D~t~ea~~~~ 106 (178)
T 3iwt_A 91 TGYSPTDITVETIRKL 106 (178)
T ss_dssp CSSSTTCCHHHHHGGG
T ss_pred cccCCCCchHHHHHHh
Confidence 7533 44444433
No 171
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=66.14 E-value=55 Score=26.99 Aligned_cols=80 Identities=9% Similarity=-0.018 Sum_probs=51.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc---------CCCchHHHHHHHH-H-hhcCce-EEEEecCCcCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---------HQNCKEALSYALS-A-KERGIK-IIIVGDGVEAH 126 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa---------HRtp~~l~~~~~~-~-~~~g~~-ViIa~AG~aa~ 126 (202)
.+|+|++- .....-+...+.|++.|+++- .+.+. +-.++.+.+++++ + ...|++ ||+.|.++...
T Consensus 118 ~rvglltp--y~~~~~~~~~~~l~~~Giev~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~CT~l~~l 194 (240)
T 3ixl_A 118 RRVALATA--YIDDVNERLAAFLAEESLVPT-GCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLSSGGLLTL 194 (240)
T ss_dssp SEEEEEES--SCHHHHHHHHHHHHHTTCEEE-EEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEECTTSCCT
T ss_pred CEEEEEeC--ChHHHHHHHHHHHHHCCCEEe-ccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEeCCCCchh
Confidence 58999963 555556677788999998632 22221 2357788888888 6 667786 66667666433
Q ss_pred h-hhhhhhccCCcEEE
Q 028883 127 L-SGVAAANSQILVIR 141 (202)
Q Consensus 127 L-pgvvA~~T~~PVIg 141 (202)
. -.-+-..+.+|||-
T Consensus 195 ~~i~~le~~lg~PVid 210 (240)
T 3ixl_A 195 DAIPEVERRLGVPVVS 210 (240)
T ss_dssp THHHHHHHHHSSCEEE
T ss_pred hhHHHHHHHhCCCEEe
Confidence 2 12334556788863
No 172
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=65.02 E-value=5.1 Score=35.49 Aligned_cols=48 Identities=17% Similarity=0.131 Sum_probs=29.3
Q ss_pred chHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEecCCC
Q 028883 99 CKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 146 (202)
Q Consensus 99 p~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~~ 146 (202)
++..++.++.+++.+++.+|++-|-...-....=+.-.+||||||-.-
T Consensus 80 ~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiPkTI 127 (320)
T 1pfk_A 80 ENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEMGFPCIGLPGTI 127 (320)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEBCT
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCchHHHHHHHHhhCCCEEEEeccc
Confidence 445666777777777777776655432222212223479999999763
No 173
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=64.94 E-value=45 Score=27.50 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=65.4
Q ss_pred CCCCeEEEEecCCCC--HHHHHHHHHHHHHhCCCeEEEEEccCC-CchHH---------------HHHHHHHhhcCceEE
Q 028883 56 TDAPIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQ-NCKEA---------------LSYALSAKERGIKII 117 (202)
Q Consensus 56 ~~~~~V~IimGS~SD--~~v~~~a~~~L~~~gi~~ev~V~SaHR-tp~~l---------------~~~~~~~~~~g~~Vi 117 (202)
.+.+.|.|..||... .....++.+.|+.++ +.+-+..-.. ..+.+ .++. ..++++
T Consensus 229 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~~ll-----~~ad~~ 301 (402)
T 3ia7_A 229 PDAPVLLVSLGNQFNEHPEFFRACAQAFADTP--WHVVMAIGGFLDPAVLGPLPPNVEAHQWIPFHSVL-----AHARAC 301 (402)
T ss_dssp TTCCEEEEECCSCSSCCHHHHHHHHHHHTTSS--CEEEEECCTTSCGGGGCSCCTTEEEESCCCHHHHH-----TTEEEE
T ss_pred CCCCEEEEECCCCCcchHHHHHHHHHHHhcCC--cEEEEEeCCcCChhhhCCCCCcEEEecCCCHHHHH-----hhCCEE
Confidence 344678887787643 235667777776665 4444432111 11111 0332 237899
Q ss_pred EEecCCcCchhhhhhhccCCcEEEecC-CCCCCChhh-HHHhhcCCCCCeeeEEecC-ChhhHHHHHHHHHcc-CCHHHH
Q 028883 118 IVGDGVEAHLSGVAAANSQILVIRVPL-LSEDWSEDD-VINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGI-ADEDLL 193 (202)
Q Consensus 118 Ia~AG~aa~LpgvvA~~T~~PVIgVP~-~~~~l~G~D-LlS~vqMP~GvpVatV~I~-n~~NAAl~Aa~IL~~-~d~~l~ 193 (202)
|.-+|...-+ =|...-+|+|.+|. .. +..+.. .+. + .|.. .+ +. +..++.-++..|..+ .|++++
T Consensus 302 v~~~G~~t~~---Ea~~~G~P~v~~p~~~~-~q~~~a~~~~--~--~g~g--~~-~~~~~~~~~~l~~~~~~ll~~~~~~ 370 (402)
T 3ia7_A 302 LTHGTTGAVL---EAFAAGVPLVLVPHFAT-EAAPSAERVI--E--LGLG--SV-LRPDQLEPASIREAVERLAADSAVR 370 (402)
T ss_dssp EECCCHHHHH---HHHHTTCCEEECGGGCG-GGHHHHHHHH--H--TTSE--EE-CCGGGCSHHHHHHHHHHHHHCHHHH
T ss_pred EECCCHHHHH---HHHHhCCCEEEeCCCcc-cHHHHHHHHH--H--cCCE--EE-ccCCCCCHHHHHHHHHHHHcCHHHH
Confidence 9877743222 23346789999998 43 222222 222 2 3442 22 23 222444454444433 578888
Q ss_pred HHHHHHHh
Q 028883 194 ERIRKYVE 201 (202)
Q Consensus 194 ~kl~~~~~ 201 (202)
+++++.++
T Consensus 371 ~~~~~~~~ 378 (402)
T 3ia7_A 371 ERVRRMQR 378 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88766543
No 174
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=64.94 E-value=5.2 Score=35.23 Aligned_cols=47 Identities=15% Similarity=0.087 Sum_probs=26.0
Q ss_pred hHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEecCCC
Q 028883 100 KEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 146 (202)
Q Consensus 100 ~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~~ 146 (202)
+..++.++.+++.+++.+|++-|-...=...--+.-.+||||||-.-
T Consensus 80 e~~~~~~~~l~~~~Id~L~~IGGdgS~~~a~~l~~~~i~vigiPkTI 126 (319)
T 4a3s_A 80 EGREKGIANLKKLGIEGLVVIGGDGSYMGAKKLTEHGFPCVGVPGTI 126 (319)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEECTTHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHhccCCcEEEeeccc
Confidence 34445555556666666665544332222222234568999999753
No 175
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=64.87 E-value=40 Score=27.51 Aligned_cols=84 Identities=11% Similarity=0.086 Sum_probs=54.0
Q ss_pred CeEEEEecCCCC-----HHHHHHHHHHHHHh-------CCCeEEEEEccCCCchHHHHHHHHHh-hcCceEEEEecCCcC
Q 028883 59 PIVGIIMESDLD-----LPVMNDAARTLSDF-------GVPYEIKILPPHQNCKEALSYALSAK-ERGIKIIIVGDGVEA 125 (202)
Q Consensus 59 ~~V~IimGS~SD-----~~v~~~a~~~L~~~-------gi~~ev~V~SaHRtp~~l~~~~~~~~-~~g~~ViIa~AG~aa 125 (202)
-+||++.-.+.. .+..+.+...+++. |.++++.+..-...|++..+.++++. .++++.||...+...
T Consensus 5 i~IG~i~p~sg~~~~~~~~~~~g~~~a~~~~n~~ggi~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~ 84 (358)
T 3hut_A 5 LLLGYELPLTGANAAYGRVFQEAARLQLDRFNAAGGVGGRPVDILYADSRDDADQARTIARAFVDDPRVVGVLGDFSSTV 84 (358)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHCTTEEEEEECSSHHH
T ss_pred EEEEEEeccCCchhhcCHHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCCCCHHHHHHHHHHHhccCCcEEEEcCCCcHH
Confidence 468888765443 23333444444554 56799999999999999998888887 667787776444332
Q ss_pred chhh-hhhhccCCcEEEe
Q 028883 126 HLSG-VAAANSQILVIRV 142 (202)
Q Consensus 126 ~Lpg-vvA~~T~~PVIgV 142 (202)
..+- -++....+|+|..
T Consensus 85 ~~~~~~~~~~~~iP~v~~ 102 (358)
T 3hut_A 85 SMAAGSIYGKEGMPQLSP 102 (358)
T ss_dssp HHHHHHHHHHHTCCEEES
T ss_pred HHHHHHHHHHCCCcEEec
Confidence 2221 1234467899964
No 176
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=64.82 E-value=59 Score=27.66 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=61.8
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCC---eEEEE-----EccCCCchHHHHHHHHHhhc-CceEEEEecCCcCchhhh
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVP---YEIKI-----LPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~---~ev~V-----~SaHRtp~~l~~~~~~~~~~-g~~ViIa~AG~aa~Lpgv 130 (202)
+++||+=|++|+|. +.++++||. ..+.+ .+..=+|.++.++.+++.++ +.+
T Consensus 5 ki~IvtDSt~dL~~-----e~~~~~~I~vvPL~v~~~~~~p~TSqps~~~~~~~f~~~~~~~~~d--------------- 64 (277)
T 3egl_A 5 PVRVIVDSSACLPT-----HVAEDLDITVINLHVMNNGEERSTSGLSSLELAASYARQLERGGDD--------------- 64 (277)
T ss_dssp CCEEEEEGGGCCCH-----HHHHHTTEEEECCEEEECSSCEEEECCCHHHHHHHHHHHHHHTTTS---------------
T ss_pred cEEEEEECCCCCCH-----HHHHHCCeEEEEEEEEECCcccccCCcCHHHHHHHHHHHHHhCCCC---------------
Confidence 58999999999994 456788874 33433 33445677777665544332 221
Q ss_pred hhhccCCcEEEecCCCCCCCh-hh-HHHhhcC-CCCCeeeEEecCC---hh---hHHHHHHHHHcc--CCHHHHHHHHHH
Q 028883 131 AAANSQILVIRVPLLSEDWSE-DD-VINSIRM-PSHVQVASVPRNN---AK---NAALYAVKVLGI--ADEDLLERIRKY 199 (202)
Q Consensus 131 vA~~T~~PVIgVP~~~~~l~G-~D-LlS~vqM-P~GvpVatV~I~n---~~---NAAl~Aa~IL~~--~d~~l~~kl~~~ 199 (202)
.||.++++++ ++| .+ ....-+| +++ .|-++ |. +. -.++.|++.... .-+++.++++++
T Consensus 65 -------~Ii~I~iSs~-LSGTy~sA~~aa~~~~~~-~I~Vi--DS~~~s~g~g~~v~~Aa~l~~~G~s~eeI~~~l~~~ 133 (277)
T 3egl_A 65 -------GVLALHISXE-LSSTWSAAVTAAAVFDDD-SVRVV--DTSSLGMAVGAAAMAAARMAXDGASLQECYDIAVDT 133 (277)
T ss_dssp -------CEEEECSCTT-TCSHHHHHHHHHTTSSTT-SEEEE--CCSCCTHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred -------cEEEEEeCcc-hhhhhHHHHHHHHhCCCC-CEEEE--CCCchhHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 2555555543 444 33 2222233 222 44444 51 12 233445555433 346888999888
Q ss_pred HhC
Q 028883 200 VEE 202 (202)
Q Consensus 200 ~~~ 202 (202)
+++
T Consensus 134 ~~~ 136 (277)
T 3egl_A 134 LXR 136 (277)
T ss_dssp HHT
T ss_pred Hhh
Confidence 763
No 177
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=64.75 E-value=5.3 Score=32.90 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=45.4
Q ss_pred CeEEEEecCCCCHHH-----HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecC----CcCchhh
Q 028883 59 PIVGIIMESDLDLPV-----MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG----VEAHLSG 129 (202)
Q Consensus 59 ~~V~IimGS~SD~~v-----~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG----~aa~Lpg 129 (202)
-+|+|++|+.|+.-- .....+.|++.| |++..+.....+..+.+. ..+++++.+.. ..+.+.+
T Consensus 4 m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g--~~v~~i~~~~~~~~~~~~------~~~D~v~~~~~~~~ge~~~~~~ 75 (307)
T 3r5x_A 4 MRIGVIMGGVSSEKQVSIMTGNEMIANLDKNK--YEIVPITLNEKMDLIEKA------KDIDFALLALHGKYGEDGTVQG 75 (307)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHHSCTTT--EEEEEEECSSGGGHHHHT------TTCSEEEECCCSHHHHSSHHHH
T ss_pred cEEEEEeCCCCcchHhHHHHHHHHHHHHHHCC--CEEEEEcccCchhHHHhc------cCCCEEEEeCCCCCCcHHHHHH
Confidence 479999999886433 334444455555 677777766444443222 34776666543 3344555
Q ss_pred hhhhccCCcEEEecCCC
Q 028883 130 VAAANSQILVIRVPLLS 146 (202)
Q Consensus 130 vvA~~T~~PVIgVP~~~ 146 (202)
++. ...+|++|.+...
T Consensus 76 ~le-~~gi~~~g~~~~~ 91 (307)
T 3r5x_A 76 TLE-SLGIPYSGSNMLS 91 (307)
T ss_dssp HHH-HHTCCBSSSCHHH
T ss_pred HHH-HcCCCeeCcCHHH
Confidence 543 3456777765543
No 178
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=64.56 E-value=5.6 Score=35.20 Aligned_cols=47 Identities=17% Similarity=0.144 Sum_probs=26.2
Q ss_pred hHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEecCCC
Q 028883 100 KEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 146 (202)
Q Consensus 100 ~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~~ 146 (202)
+...+.++.+++.+++.+|++-|-...-....=+.-.+||||||-.-
T Consensus 80 ~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~i~vvgiPkTI 126 (319)
T 1zxx_A 80 EGQLAGIEQLKKHGIDAVVVIGGDGSYHGALQLTRHGFNSIGLPGTI 126 (319)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred HHHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHhCCCEEEEeecc
Confidence 35556666666666666666544322211111123479999999753
No 179
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=64.34 E-value=12 Score=29.43 Aligned_cols=79 Identities=10% Similarity=0.066 Sum_probs=45.4
Q ss_pred CCCCeEEEEecCCCCHH------HHHHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC---
Q 028883 56 TDAPIVGIIMESDLDLP------VMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA--- 125 (202)
Q Consensus 56 ~~~~~V~IimGS~SD~~------v~~~a~~~L~~~gi~~e-v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa--- 125 (202)
..+++|+||+=|+.=.+ -..-.+..|+++|+... ..++ .- . +.+.+.++++.++++++||+..|.+.
T Consensus 5 ~~~~rv~ii~tGdEl~~G~i~Dsn~~~l~~~l~~~G~~v~~~~iv-~D-d-~~i~~al~~a~~~~~DlVittGG~s~g~~ 81 (164)
T 3pzy_A 5 MTTRSARVIIASTRASSGEYEDRCGPIITEWLAQQGFSSAQPEVV-AD-G-SPVGEALRKAIDDDVDVILTSGGTGIAPT 81 (164)
T ss_dssp --CCEEEEEEECHHHHC----CCHHHHHHHHHHHTTCEECCCEEE-CS-S-HHHHHHHHHHHHTTCSEEEEESCCSSSTT
T ss_pred CCCCEEEEEEECCCCCCCceeeHHHHHHHHHHHHCCCEEEEEEEe-CC-H-HHHHHHHHHHHhCCCCEEEECCCCCCCCC
Confidence 34589999987653110 12345677888998533 2333 22 2 55555555554446899998877643
Q ss_pred -chhhhhhhccCC
Q 028883 126 -HLSGVAAANSQI 137 (202)
Q Consensus 126 -~LpgvvA~~T~~ 137 (202)
..+-+++....+
T Consensus 82 D~t~eal~~~~~~ 94 (164)
T 3pzy_A 82 DSTPDQTVAVVDY 94 (164)
T ss_dssp CCHHHHHHTTCSE
T ss_pred ccHHHHHHHHhcc
Confidence 456666655443
No 180
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=64.25 E-value=18 Score=31.70 Aligned_cols=81 Identities=11% Similarity=0.090 Sum_probs=55.9
Q ss_pred CeEEEEecCCC----CHHHHHHHHHHHHHhCCCeEEEEEccCC-------C-chHHHHHHHHHhhcCceEEEEecCCcCc
Q 028883 59 PIVGIIMESDL----DLPVMNDAARTLSDFGVPYEIKILPPHQ-------N-CKEALSYALSAKERGIKIIIVGDGVEAH 126 (202)
Q Consensus 59 ~~V~IimGS~S----D~~v~~~a~~~L~~~gi~~ev~V~SaHR-------t-p~~l~~~~~~~~~~g~~ViIa~AG~aa~ 126 (202)
-+|+||+=|.. |....+.+.+.|+++|....+.= .+.+ + -+|..++.+-+.+..+++|+++-|+.++
T Consensus 13 D~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~-~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~ 91 (331)
T 4e5s_A 13 DEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFST-HAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGGYNS 91 (331)
T ss_dssp CEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECT-TTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCCSCG
T ss_pred CEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECC-chhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccccccH
Confidence 47999986654 57889999999999998654321 0111 1 2577778777777788999999998654
Q ss_pred ---hhh----hhhhccCCcEEE
Q 028883 127 ---LSG----VAAANSQILVIR 141 (202)
Q Consensus 127 ---Lpg----vvA~~T~~PVIg 141 (202)
||- .+. ..+++.+|
T Consensus 92 ~rlL~~lD~~~i~-~~PK~~~G 112 (331)
T 4e5s_A 92 NGLLKYLDYDLIR-ENPKFFCG 112 (331)
T ss_dssp GGGGGGCCHHHHH-TSCCEEEE
T ss_pred HHHHhhcChhHHH-hCCeEEEE
Confidence 232 232 24677776
No 181
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=64.18 E-value=32 Score=29.11 Aligned_cols=75 Identities=17% Similarity=0.207 Sum_probs=54.3
Q ss_pred HHhCCCeEEEEEcc--C--CCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEe-cCCCCCCChhhHHH
Q 028883 82 SDFGVPYEIKILPP--H--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV-PLLSEDWSEDDVIN 156 (202)
Q Consensus 82 ~~~gi~~ev~V~Sa--H--Rtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgV-P~~~~~l~G~DLlS 156 (202)
++||+.. +.+.+. . =+|.++.++++..+++++++|+.=...+..+.-.+|-.+..||+.+ |+.+..-+|-|.++
T Consensus 194 ~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~la~~~g~~v~~l~pl~~~~~~~~~Y~~ 272 (286)
T 3gi1_A 194 KRFGLKQ-LGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPKIAHAIAKSTGAKVKTLSPLEAAPSGNKTYLE 272 (286)
T ss_dssp HHTTCEE-EEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCTHHHHHHHHTTTCEEEECCCSCSCCSSSCCHHH
T ss_pred HHCCCeE-eeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHhCCeEEEecccccCCCCcCCHHH
Confidence 5677763 344432 2 4678999999999999999999999999999999999999999876 55442223333333
Q ss_pred h
Q 028883 157 S 157 (202)
Q Consensus 157 ~ 157 (202)
+
T Consensus 273 ~ 273 (286)
T 3gi1_A 273 N 273 (286)
T ss_dssp H
T ss_pred H
Confidence 3
No 182
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=64.10 E-value=38 Score=25.76 Aligned_cols=81 Identities=15% Similarity=0.080 Sum_probs=55.7
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeE---------------EEEEccCCCchHHHHHHHHHhhcCceEEEEecCCc
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYE---------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE 124 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~e---------------v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a 124 (202)
+|-| .|.-+-...+++....|..+|.++. +-++|..+...++.+.++.++++|+++|..-.-..
T Consensus 39 ~I~i-~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~ 117 (186)
T 1m3s_A 39 QIFT-AGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPE 117 (186)
T ss_dssp CEEE-ECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred eEEE-EecCHHHHHHHHHHHHHHhcCCeEEEeCcccccCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 4544 4555558999999999999998743 46778888888899999999999988654333233
Q ss_pred CchhhhhhhccCCcEEEecCCC
Q 028883 125 AHLSGVAAANSQILVIRVPLLS 146 (202)
Q Consensus 125 a~LpgvvA~~T~~PVIgVP~~~ 146 (202)
+-| +...+. +|-+|...
T Consensus 118 s~l----~~~ad~-~l~~~~~~ 134 (186)
T 1m3s_A 118 SSI----GKQADL-IIRMPGSP 134 (186)
T ss_dssp SHH----HHHCSE-EEECSCCS
T ss_pred Cch----HHhCCE-EEEeCCcc
Confidence 333 344443 55566543
No 183
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=64.06 E-value=20 Score=26.07 Aligned_cols=75 Identities=4% Similarity=0.050 Sum_probs=52.2
Q ss_pred eEEEEec---CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh--hc
Q 028883 60 IVGIIME---SDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--AN 134 (202)
Q Consensus 60 ~V~IimG---S~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA--~~ 134 (202)
+|.+++| |+| =.+++..+.+++.|+++++..++.+..++. . ..+++||...-..-.+.-+-. ..
T Consensus 6 kIlvvC~~G~~TS--ll~~kl~~~~~~~gi~~~i~~~~~~~~~~~----~-----~~~D~Ii~t~~l~~~~~~~~~~~~~ 74 (109)
T 2l2q_A 6 NILLVCGAGMSTS--MLVQRIEKYAKSKNINATIEAIAETRLSEV----V-----DRFDVVLLAPQSRFNKKRLEEITKP 74 (109)
T ss_dssp EEEEESSSSCSSC--HHHHHHHHHHHHHTCSEEEEEECSTTHHHH----T-----TTCSEEEECSCCSSHHHHHHHHHHH
T ss_pred EEEEECCChHhHH--HHHHHHHHHHHHCCCCeEEEEecHHHHHhh----c-----CCCCEEEECCccHHHHHHHHHHhcc
Confidence 5778876 366 566799999999999999988888764442 1 347999887765554444432 22
Q ss_pred cCCcEEEecCC
Q 028883 135 SQILVIRVPLL 145 (202)
Q Consensus 135 T~~PVIgVP~~ 145 (202)
...||+-+++.
T Consensus 75 ~~~pv~~I~~~ 85 (109)
T 2l2q_A 75 KGIPIEIINTI 85 (109)
T ss_dssp HTCCEEECCHH
T ss_pred cCCCEEEEChH
Confidence 46788877764
No 184
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa}
Probab=63.91 E-value=24 Score=28.64 Aligned_cols=65 Identities=12% Similarity=0.148 Sum_probs=41.2
Q ss_pred HHHHHHhCCC-eEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh--------hhhccCCcEEEecCCC
Q 028883 78 ARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--------AAANSQILVIRVPLLS 146 (202)
Q Consensus 78 ~~~L~~~gi~-~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv--------vA~~T~~PVIgVP~~~ 146 (202)
.+.++++|++ ++..+..- .| ...+.+.+++.+++.||.++-+-+.+..+ +.-+++.||+-||+.+
T Consensus 205 ~~~~~~~g~~~~~~~v~~g--~~--~~~I~~~a~~~~~dLiVmG~~g~~~~~~~~~Gsv~~~vl~~~~~pVLvv~~~~ 278 (290)
T 3mt0_A 205 RTFQAEYGFSDEQLHIEEG--PA--DVLIPRTAQKLDAVVTVIGTVARTGLSGALIGNTAEVVLDTLESDVLVLKPDD 278 (290)
T ss_dssp HHHHHHHTCCTTTEEEEES--CH--HHHHHHHHHHHTCSEEEEECCSSCCGGGCCSCHHHHHHHTTCSSEEEEECCHH
T ss_pred HHHHHHcCCCcceEEEecc--CH--HHHHHHHHHhcCCCEEEECCCCCcCCcceecchHHHHHHhcCCCCEEEECCCC
Confidence 3455678985 55555443 22 34455555567789888887666555542 3346899999998653
No 185
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=63.81 E-value=33 Score=27.69 Aligned_cols=83 Identities=18% Similarity=0.056 Sum_probs=51.7
Q ss_pred eEEEEecCCCC-----HHHHHHHHHHHHH-------hCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCch
Q 028883 60 IVGIIMESDLD-----LPVMNDAARTLSD-------FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 127 (202)
Q Consensus 60 ~V~IimGS~SD-----~~v~~~a~~~L~~-------~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~L 127 (202)
+|+++.--+.. ....+.+...+++ .|.++++.+..-.-.|++..+.++++.+++++.||...+....+
T Consensus 4 ~IG~~~p~~g~~~~~~~~~~~g~~~a~~~iN~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~s~~~~ 83 (346)
T 1usg_A 4 KVAVVGAMSGPIAQWGDMEFNGARQAIKDINAKGGIKGDKLVGVEYDDACDPKQAVAVANKIVNDGIKYVIGHLCSSSTQ 83 (346)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHHHHHHTTTBTTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEECCSSHHHHH
T ss_pred EEEEEeCCCCcchhcCHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEcCCCcHHHH
Confidence 57777654332 1334444555666 57777888887788888888888877777888887543322222
Q ss_pred hh-hhhhccCCcEEEe
Q 028883 128 SG-VAAANSQILVIRV 142 (202)
Q Consensus 128 pg-vvA~~T~~PVIgV 142 (202)
+- -++....+|+|..
T Consensus 84 ~~~~~~~~~~ip~v~~ 99 (346)
T 1usg_A 84 PASDIYEDEGILMISP 99 (346)
T ss_dssp HHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHCCCeEEee
Confidence 21 1233457899864
No 186
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis}
Probab=63.77 E-value=30 Score=28.13 Aligned_cols=65 Identities=11% Similarity=0.049 Sum_probs=42.1
Q ss_pred HHHHHHhCCC-eEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhh--------hhccCCcEEEecCCC
Q 028883 78 ARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVA--------AANSQILVIRVPLLS 146 (202)
Q Consensus 78 ~~~L~~~gi~-~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgvv--------A~~T~~PVIgVP~~~ 146 (202)
.+.++++|++ .+..+..- .| ...+.+.+++.+++.||.++-+-..+.+++ .-++++||+-||..+
T Consensus 234 ~~~~~~~~~~~~~~~v~~g--~~--~~~I~~~a~~~~~dLiV~G~~g~~~~~~~~~Gsv~~~vl~~~~~pVLvv~~~~ 307 (319)
T 3olq_A 234 KELRQKFSIPEEKTHVKEG--LP--EQVIPQVCEELNAGIVVLGILGRTGLSAAFLGNTAEQLIDHIKCDLLAIKPDG 307 (319)
T ss_dssp HHHHHHTTCCGGGEEEEES--CH--HHHHHHHHHHTTEEEEEEECCSCCSTHHHHHHHHHHHHHTTCCSEEEEECCTT
T ss_pred HHHHHHhCCCcccEEEecC--Cc--HHHHHHHHHHhCCCEEEEeccCccCCccccccHHHHHHHhhCCCCEEEECCCC
Confidence 3445778885 34444432 33 445556666678899999885555555433 346899999999865
No 187
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=63.74 E-value=58 Score=26.47 Aligned_cols=58 Identities=19% Similarity=0.176 Sum_probs=42.8
Q ss_pred hCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh-hhhccCCcEEE
Q 028883 84 FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV-AAANSQILVIR 141 (202)
Q Consensus 84 ~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv-vA~~T~~PVIg 141 (202)
.|.++++.+..-...|++..+.++++.+++++.||...+....++-. ++....+|+|.
T Consensus 40 ~G~~~~l~~~d~~~~~~~~~~~~~~l~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~ 98 (356)
T 3ipc_A 40 NGEQIKIVLGDDVSDPKQGISVANKFVADGVKFVVGHANSGVSIPASEVYAENGILEIT 98 (356)
T ss_dssp TTBCEEEEEEECTTCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHHHHHCCCcEEEcCCCcHHHHHHHHHHHhCCCeEEe
Confidence 35779999999999999999988888778888888765544333321 33456789986
No 188
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=63.71 E-value=59 Score=26.51 Aligned_cols=80 Identities=16% Similarity=0.111 Sum_probs=47.3
Q ss_pred EEEecCCCCHH---HHHHHHHHHHHhCCCeEEEEE--ccC----CCchHHHHHHHHHhhcCceEEEEecC-CcCchhhhh
Q 028883 62 GIIMESDLDLP---VMNDAARTLSDFGVPYEIKIL--PPH----QNCKEALSYALSAKERGIKIIIVGDG-VEAHLSGVA 131 (202)
Q Consensus 62 ~IimGS~SD~~---v~~~a~~~L~~~gi~~ev~V~--SaH----Rtp~~l~~~~~~~~~~g~~ViIa~AG-~aa~Lpgvv 131 (202)
-+..|+.++-. .+++..+.++++|+++.+.+. +.| .+++...+.++.+++.|++.+.+.-+ .-..+.- +
T Consensus 119 ~l~~~~~~~~~~~~~~~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~~~~~~~l~~-i 197 (273)
T 2qjg_A 119 HVNVGSDEDWEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELGADIVKTSYTGDIDSFRD-V 197 (273)
T ss_dssp EEEETSTTHHHHHHHHHHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECCCSSHHHHHH-H
T ss_pred EEecCCCCHHHHHHHHHHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcCCCEEEECCCCCHHHHHH-H
Confidence 45678776654 455566666779999876542 223 45666667667788888986555421 1112222 2
Q ss_pred hhccCCcEEEe
Q 028883 132 AANSQILVIRV 142 (202)
Q Consensus 132 A~~T~~PVIgV 142 (202)
...++.||++.
T Consensus 198 ~~~~~ipvva~ 208 (273)
T 2qjg_A 198 VKGCPAPVVVA 208 (273)
T ss_dssp HHHCSSCEEEE
T ss_pred HHhCCCCEEEE
Confidence 33457788763
No 189
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A*
Probab=63.63 E-value=28 Score=27.63 Aligned_cols=17 Identities=29% Similarity=0.249 Sum_probs=6.9
Q ss_pred HHHHHHHHHhCCCeEEE
Q 028883 75 NDAARTLSDFGVPYEIK 91 (202)
Q Consensus 75 ~~a~~~L~~~gi~~ev~ 91 (202)
+++.+.|++.|++++..
T Consensus 202 ~~~~~~l~~~~~~~~~~ 218 (268)
T 3ab8_A 202 LEAEAYLRDHGVEASAL 218 (268)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCceEEE
Confidence 33334444444444433
No 190
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=63.58 E-value=46 Score=27.74 Aligned_cols=86 Identities=13% Similarity=0.130 Sum_probs=53.8
Q ss_pred CCCeEEEEecCCCC-----HHHHHHHHHHHHHh-------CCCeEEEEEccCCCchHHHHHHHHHhh-cCceEEEEecCC
Q 028883 57 DAPIVGIIMESDLD-----LPVMNDAARTLSDF-------GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGV 123 (202)
Q Consensus 57 ~~~~V~IimGS~SD-----~~v~~~a~~~L~~~-------gi~~ev~V~SaHRtp~~l~~~~~~~~~-~g~~ViIa~AG~ 123 (202)
+..+|+++.-.+.. ....+.+...+++. |.++++.+..-...|++..+.++++.. ++++.||...+.
T Consensus 6 ~~~~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~N~~ggi~G~~l~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s 85 (385)
T 1pea_A 6 ERPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMS 85 (385)
T ss_dssp --CEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHTTTTBTTBCCEEEEECCTTCHHHHHHHHHHHHHTTCCCEEEECCSH
T ss_pred CCeEEEEEECCCCcchhcCHHHHHHHHHHHHHhccccCCCCeEEEEEEeCCCCCHHHHHHHHHHHHhhCCcEEEECCCch
Confidence 34578888754332 13344455556665 777888888888889888888888765 778888875443
Q ss_pred cCchhh-hhhhccCCcEEEe
Q 028883 124 EAHLSG-VAAANSQILVIRV 142 (202)
Q Consensus 124 aa~Lpg-vvA~~T~~PVIgV 142 (202)
....+- -++.....|+|.+
T Consensus 86 ~~~~~~~~~~~~~~iP~v~~ 105 (385)
T 1pea_A 86 HTRKAVMPVVERADALLCYP 105 (385)
T ss_dssp HHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHhcCceEEEC
Confidence 222221 1223457898864
No 191
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=63.56 E-value=35 Score=28.29 Aligned_cols=42 Identities=5% Similarity=0.016 Sum_probs=25.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 106 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~ 106 (202)
+++++|+|+++- +....++.|-+-|. .+.+ .-|.++++.+..
T Consensus 31 gk~vlVTGas~g--IG~~la~~l~~~G~--~V~~--~~r~~~~~~~~~ 72 (301)
T 3tjr_A 31 GRAAVVTGGASG--IGLATATEFARRGA--RLVL--SDVDQPALEQAV 72 (301)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHH
T ss_pred CCEEEEeCCCCH--HHHHHHHHHHHCCC--EEEE--EECCHHHHHHHH
Confidence 578999999874 55666777766664 3332 335555544433
No 192
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=62.97 E-value=20 Score=29.94 Aligned_cols=59 Identities=20% Similarity=0.187 Sum_probs=44.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhh-------------------cCceEEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-------------------RGIKIIIV 119 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~-------------------~g~~ViIa 119 (202)
.+.++|+|.. .+.+.++..|.+.| ++.| .+|++++..++.++... .+++++|.
T Consensus 128 ~k~vlV~GaG---giG~aia~~L~~~G---~V~v--~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~DilVn 199 (287)
T 1nvt_A 128 DKNIVIYGAG---GAARAVAFELAKDN---NIII--ANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIIN 199 (287)
T ss_dssp SCEEEEECCS---HHHHHHHHHHTSSS---EEEE--ECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEE
T ss_pred CCEEEEECch---HHHHHHHHHHHHCC---CEEE--EECCHHHHHHHHHHHhhhcccccceeEEEeeHHHhhCCCCEEEE
Confidence 4578888874 88899999998888 5555 57999988888765421 24689999
Q ss_pred ecCCcC
Q 028883 120 GDGVEA 125 (202)
Q Consensus 120 ~AG~aa 125 (202)
.+|...
T Consensus 200 ~ag~~~ 205 (287)
T 1nvt_A 200 ATPIGM 205 (287)
T ss_dssp CSCTTC
T ss_pred CCCCCC
Confidence 988643
No 193
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=62.78 E-value=2.2 Score=36.50 Aligned_cols=81 Identities=21% Similarity=0.169 Sum_probs=46.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEE-c-----cCCCchHH----HHHHHHHhhcCce-EEEEecCCcC-c
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL-P-----PHQNCKEA----LSYALSAKERGIK-IIIVGDGVEA-H 126 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~-S-----aHRtp~~l----~~~~~~~~~~g~~-ViIa~AG~aa-~ 126 (202)
..|+|+=++-..+.+.++..+.+-.-.+ +.+. . --|+.+.+ .+.++.+++.|++ ++|+|-..++ +
T Consensus 23 ~~IGvfDsG~Ggltv~~~i~~~~P~~~~---iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~IVIaCNTas~~~ 99 (286)
T 2jfq_A 23 KPIGVIDSGVGGLTVAKEIMRQLPNETI---YYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVA 99 (286)
T ss_dssp SCEEEEESSSTTHHHHHHHHHHCTTCCE---EEEECTTTCCCTTSCHHHHHHHHHHHHHHHTTSCCSEEEECCHHHHHHH
T ss_pred CcEEEEeCCCCcHHHHHHHHHHCCCccE---EEeccCCCCCcCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCchhHHH
Confidence 3699993444488898888877532211 1111 1 12444444 4455666677887 5555555543 3
Q ss_pred hhhhhhhccCCcEEEec
Q 028883 127 LSGVAAANSQILVIRVP 143 (202)
Q Consensus 127 LpgvvA~~T~~PVIgVP 143 (202)
+. -+...+..||||+.
T Consensus 100 l~-~lr~~~~iPVigi~ 115 (286)
T 2jfq_A 100 LE-YLQKTLSISVIGVI 115 (286)
T ss_dssp HH-HHHHHCSSEEEESH
T ss_pred HH-HHHHhCCCCEEecc
Confidence 44 44456789999954
No 194
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=62.62 E-value=28 Score=24.29 Aligned_cols=73 Identities=14% Similarity=0.020 Sum_probs=47.2
Q ss_pred eEEEEecCC---CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccC
Q 028883 60 IVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQ 136 (202)
Q Consensus 60 ~V~IimGS~---SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~ 136 (202)
.|.|.+.|+ +.=|.++++...|+++|++|+..=+.- .|+...++.+. .+...
T Consensus 18 ~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~--~~~~~~~l~~~-----------------------~g~~~ 72 (105)
T 2yan_A 18 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE--DEEVRQGLKAY-----------------------SNWPT 72 (105)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGG--CHHHHHHHHHH-----------------------HTCCS
T ss_pred CEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCC--CHHHHHHHHHH-----------------------HCCCC
Confidence 477777544 666899999999999999987554443 34433333321 23467
Q ss_pred CcEEEecCCCCCCChhh-HHHhhc
Q 028883 137 ILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 137 ~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
.|+|- +.+...+|.| +..+.+
T Consensus 73 vP~v~--i~g~~igg~d~~~~l~~ 94 (105)
T 2yan_A 73 YPQLY--VKGELVGGLDIVKELKE 94 (105)
T ss_dssp SCEEE--ETTEEEECHHHHHHHHH
T ss_pred CCeEE--ECCEEEeChHHHHHHHH
Confidence 78774 2444567777 777655
No 195
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=62.54 E-value=42 Score=26.64 Aligned_cols=116 Identities=15% Similarity=0.047 Sum_probs=60.3
Q ss_pred CeEEEEecCCCCHHH---HHHHHHHHHHhCCCeEEE-EEccCCCchHHHHHHHHHhhc----CceEEEEecCCcCchhhh
Q 028883 59 PIVGIIMESDLDLPV---MNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSAKER----GIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 59 ~~V~IimGS~SD~~v---~~~a~~~L~~~gi~~ev~-V~SaHRtp~~l~~~~~~~~~~----g~~ViIa~AG~aa~Lpgv 130 (202)
.+|+++.|....... .+...+.|++.|++++.. +....-.++...+.++++-.+ ..+.|++..... + -|+
T Consensus 141 ~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ai~~~~d~~-a-~g~ 218 (309)
T 2fvy_A 141 IQFVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAM-A-MGA 218 (309)
T ss_dssp EEEEEEECSTTCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTCHHHHHHHHHHHHTSTTGGGCCEEEESSHHH-H-HHH
T ss_pred eEEEEEEcCCCCccHHHHHHHHHHHHHhcCCceEEEEEecCCCCHHHHHHHHHHHHHhCCCCCccEEEECCchh-H-HHH
Confidence 478999887655433 334557788899987643 333333555555555544332 468888754321 1 233
Q ss_pred hhhc----c-CCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHH
Q 028883 131 AAAN----S-QILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVL 185 (202)
Q Consensus 131 vA~~----T-~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL 185 (202)
+.++ - .++|||+ ++.. ++..-++.|.+.+||..+ ...-|..|++.|
T Consensus 219 ~~al~~~g~~di~vig~-------d~~~-~~~~~~~~g~~lttv~~~-~~~~g~~a~~~l 269 (309)
T 2fvy_A 219 VEALKAHNKSSIPVFGV-------DALP-EALALVKSGALAGTVLND-ANNQAKATFDLA 269 (309)
T ss_dssp HHHHHHTTCTTSCEECS-------BCCH-HHHHHHHHTSSCBEEECC-HHHHHHHHHHHH
T ss_pred HHHHHHcCCCCceEEec-------CCCH-HHHHHHHcCCceEEEecC-HHHHHHHHHHHH
Confidence 3332 2 5666653 2322 111112234456888654 444455555543
No 196
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=62.30 E-value=40 Score=33.76 Aligned_cols=128 Identities=11% Similarity=0.109 Sum_probs=68.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCC----chH------HHHHHHHHhhcCceEEEEecCCcCchh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQN----CKE------ALSYALSAKERGIKIIIVGDGVEAHLS 128 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRt----p~~------l~~~~~~~~~~g~~ViIa~AG~aa~Lp 128 (202)
+.|.||..++-=.-.+-+|++.|++-|| .+||+|.|-. |.. -.+..+..-...-.+|++..|....+.
T Consensus 660 ~DVvLiAtGsev~~EAL~AA~~L~~~GI--~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T~e~h~i~~~gGlgsaV~ 737 (845)
T 3ahc_A 660 VQVVLASAGDVPTQELMAASDALNKMGI--KFKVVNVVDLLKLQSRENNDEALTDEEFTELFTADKPVLFAYHSYAQDVR 737 (845)
T ss_dssp CSEEEEEESHHHHHHHHHHHHHHHHTTC--CEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHCSSSCEEEEESSCHHHHH
T ss_pred CCEEEEEeccHHHHHHHHHHHHHHhCCC--CEEEEEeCCCCccCCccccccccCHHHhCcEeecCCcceeeecCcHHHHH
Confidence 4555554442222226789999999888 6788888743 221 011111111112358888888888888
Q ss_pred hhhhhc-c--CCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHH-ccCCHHHHHHHHHHH
Q 028883 129 GVAAAN-S--QILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVL-GIADEDLLERIRKYV 200 (202)
Q Consensus 129 gvvA~~-T--~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL-~~~d~~l~~kl~~~~ 200 (202)
.+++.. . ++=|+|+|=.+....-.||+-.-.+ ..++-+..|.+.+ +.....+++++++.+
T Consensus 738 ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~gl------------d~~~Iv~~a~~~l~~~~~~~~~~~~~~~~ 801 (845)
T 3ahc_A 738 GLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVNDM------------DRYALQAAALKLIDADKYADKIDELNAFR 801 (845)
T ss_dssp HHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTTTC------------SHHHHHHHHHHHHHTTTTHHHHHHHHHHH
T ss_pred HHHHhCCCCceEEEEeccCCCCCCCHHHHHHHhCc------------CHHHHHHHHHHHcchhhHHHHHHHHHHHH
Confidence 888876 2 2338888875433222335544321 3333333444444 333445666665544
No 197
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=62.06 E-value=34 Score=29.79 Aligned_cols=82 Identities=17% Similarity=0.080 Sum_probs=57.8
Q ss_pred CeEEEEecCCC-CHHHHHHHHHHHHHhCCCeEEEEEccCC--------CchHHHHHHHHHhhcCceEEEEecCCcCch--
Q 028883 59 PIVGIIMESDL-DLPVMNDAARTLSDFGVPYEIKILPPHQ--------NCKEALSYALSAKERGIKIIIVGDGVEAHL-- 127 (202)
Q Consensus 59 ~~V~IimGS~S-D~~v~~~a~~~L~~~gi~~ev~V~SaHR--------tp~~l~~~~~~~~~~g~~ViIa~AG~aa~L-- 127 (202)
-+|+||+=|.. |.+..+.+.+.|+++|....+. -.+.+ --+|..++.+-+.+..+++|+++-|+.++.
T Consensus 18 d~I~ivaPSs~~~~~~~~~~~~~L~~~G~~v~~~-~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga~rl 96 (311)
T 1zl0_A 18 GRVALIAPASAIATDVLEATLRQLEVHGVDYHLG-RHVEARYRYLAGTVEQRLEDLHNAFDMPDITAVWCLRGGYGCGQL 96 (311)
T ss_dssp SEEEEECCSBCCCHHHHHHHHHHHHHTTCCEEEC-TTTTCCBTTBSSCHHHHHHHHHHHHHSTTEEEEEESCCSSCGGGG
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHhCCCEEEEC-ccccccccccCCCHHHHHHHHHHHHhCCCCCEEEEccCCcCHHHH
Confidence 47999987664 6777899999999999876553 11211 235677777777777889999999997654
Q ss_pred -h----hhhhhccCCcEEE
Q 028883 128 -S----GVAAANSQILVIR 141 (202)
Q Consensus 128 -p----gvvA~~T~~PVIg 141 (202)
| ..+..-.+++.+|
T Consensus 97 Lp~LD~~~i~~a~PK~~iG 115 (311)
T 1zl0_A 97 LPGLDWGRLQAASPRPLIG 115 (311)
T ss_dssp TTTCCHHHHHHSCCCCEEE
T ss_pred hhccchhhhhccCCCEEEE
Confidence 4 3343226777877
No 198
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=62.04 E-value=33 Score=27.60 Aligned_cols=43 Identities=7% Similarity=0.098 Sum_probs=27.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.++++|+|+++- +...+++.|-+-|. . |+-..|.++++.+..+
T Consensus 7 ~k~vlVTGas~G--IG~aia~~l~~~G~--~--V~~~~r~~~~~~~~~~ 49 (252)
T 3h7a_A 7 NATVAVIGAGDY--IGAEIAKKFAAEGF--T--VFAGRRNGEKLAPLVA 49 (252)
T ss_dssp SCEEEEECCSSH--HHHHHHHHHHHTTC--E--EEEEESSGGGGHHHHH
T ss_pred CCEEEEECCCch--HHHHHHHHHHHCCC--E--EEEEeCCHHHHHHHHH
Confidence 578999999984 56677777777775 2 3333455555444433
No 199
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=61.78 E-value=41 Score=25.39 Aligned_cols=77 Identities=14% Similarity=0.037 Sum_probs=54.5
Q ss_pred EEEecCCCCHHHHHHHHHHHHHhCCCeE---------------EEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCc
Q 028883 62 GIIMESDLDLPVMNDAARTLSDFGVPYE---------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH 126 (202)
Q Consensus 62 ~IimGS~SD~~v~~~a~~~L~~~gi~~e---------------v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~ 126 (202)
.++.|.-+-...++.....|..+|.++. +-+.|..+...++.+.++.++++|+++| ++.+...
T Consensus 43 I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi-~IT~~~~- 120 (180)
T 1jeo_A 43 IFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNII-AIVCECG- 120 (180)
T ss_dssp EEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTTCCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEE-EEESSCC-
T ss_pred EEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCccccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEE-EEeCCCC-
Confidence 3456666678899999999999998643 4678888888889999999999998764 4444332
Q ss_pred hhhhhhhccCCcEEEecC
Q 028883 127 LSGVAAANSQILVIRVPL 144 (202)
Q Consensus 127 LpgvvA~~T~~PVIgVP~ 144 (202)
+ ++...+. +|-+|.
T Consensus 121 --s-l~~~ad~-~l~~~~ 134 (180)
T 1jeo_A 121 --N-VVEFADL-TIPLEV 134 (180)
T ss_dssp --G-GGGGCSE-EEECCC
T ss_pred --h-HHHhCCE-EEEeCC
Confidence 2 4445554 455665
No 200
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=61.68 E-value=15 Score=29.55 Aligned_cols=82 Identities=17% Similarity=0.092 Sum_probs=44.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC-----CeEEEEEccCCCchHHH--------------HHHHHHhhcCceEEE-
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV-----PYEIKILPPHQNCKEAL--------------SYALSAKERGIKIII- 118 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi-----~~ev~V~SaHRtp~~l~--------------~~~~~~~~~g~~ViI- 118 (202)
.++||| |+-+=+..+.--.++.+...- ...+.+.|-=..|++.. +.++.+++.|++.|+
T Consensus 2 ~~iGii-GGmg~~at~~~~~~i~~~~~~~~d~~~~~~~~~~~~~i~~r~~~~~~~~~~~~~~l~~~~~~l~~~g~d~ivi 80 (228)
T 1jfl_A 2 KTIGIL-GGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAYILGKGEDPRPQLIWTAKRLEECGADFIIM 80 (228)
T ss_dssp CCEEEE-ECSSHHHHHHHHHHHHHTCCCSSGGGSCCEEEEECTTSCCHHHHHTTSSCCCHHHHHHHHHHHHHHTCSEEEC
T ss_pred CeEEEe-cccCHHHHHHHHHHHHHHHHhhcCCccCcEeEEeCCCHHHHHHHHHcCCchHHHHHHHHHHHHHHcCCCEEEE
Confidence 368888 555544333323333222111 13445555444566644 777888888887544
Q ss_pred EecCCcCchhhhhhhccCCcEEEe
Q 028883 119 VGDGVEAHLSGVAAANSQILVIRV 142 (202)
Q Consensus 119 a~AG~aa~LpgvvA~~T~~PVIgV 142 (202)
++-.++..++ -+...+..||||+
T Consensus 81 aCnTa~~~~~-~l~~~~~iPvi~i 103 (228)
T 1jfl_A 81 PCNTAHAFVE-DIRKAIKIPIISM 103 (228)
T ss_dssp SCTGGGGGHH-HHHHHCSSCBCCH
T ss_pred cCccHHHHHH-HHHHhCCCCEech
Confidence 4443443333 4445678999985
No 201
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=61.56 E-value=27 Score=27.73 Aligned_cols=78 Identities=13% Similarity=-0.012 Sum_probs=48.4
Q ss_pred CCCeEEEEecCCC------------CHHHHHHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHHhhc-CceEEEEecC
Q 028883 57 DAPIVGIIMESDL------------DLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKER-GIKIIIVGDG 122 (202)
Q Consensus 57 ~~~~V~IimGS~S------------D~~v~~~a~~~L~~~gi~~e-v~V~SaHRtp~~l~~~~~~~~~~-g~~ViIa~AG 122 (202)
.+++|+||+=|+. |.. ..-.+..|+++|+... ..++ -=.++.+.+.++++.++ ++++||+..|
T Consensus 14 ~~~rv~IittGde~~~~~~~~G~i~Dsn-~~~L~~~l~~~G~~v~~~~iv--~Dd~~~I~~al~~a~~~~~~DlVittGG 90 (178)
T 2pjk_A 14 KSLNFYVITISTSRYEKLLKKEPIVDES-GDIIKQLLIENGHKIIGYSLV--PDDKIKILKAFTDALSIDEVDVIISTGG 90 (178)
T ss_dssp CCCEEEEEEECHHHHHHHHTTCCCCCHH-HHHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHTCTTCCEEEEESC
T ss_pred CCCEEEEEEeCcccccccccCCeEeehH-HHHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4478999987752 322 2335677889998643 2333 23456666666666554 5899998776
Q ss_pred Cc----CchhhhhhhccCC
Q 028883 123 VE----AHLSGVAAANSQI 137 (202)
Q Consensus 123 ~a----a~LpgvvA~~T~~ 137 (202)
.+ ...+-+++....+
T Consensus 91 ~s~g~~D~t~eal~~~~~~ 109 (178)
T 2pjk_A 91 TGYSPTDITVETIRKLFDR 109 (178)
T ss_dssp CSSSTTCCHHHHHGGGCSE
T ss_pred CCCCCCcchHHHHHHHhcc
Confidence 54 4567777665443
No 202
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=61.11 E-value=11 Score=30.30 Aligned_cols=114 Identities=16% Similarity=0.146 Sum_probs=75.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeE---EEEEccCCCchHHHHHHHHHhhcCceEEEEec--CCcCchh-----
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYE---IKILPPHQNCKEALSYALSAKERGIKIIIVGD--GVEAHLS----- 128 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~e---v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A--G~aa~Lp----- 128 (202)
.+++||.+.-.+-.-.+.|.+.|++.|+..+ ++|-++.=.|--..++++ +..++.||+.. |..-|-=
T Consensus 3 ~ri~IV~arfn~~~Ll~gA~~~L~~~G~~~~i~~~~VPGafEiP~aak~la~---~~~yDavIaLG~VG~T~Hfd~Va~~ 79 (156)
T 2b99_A 3 KKVGIVDTTFARVDMASIAIKKLKELSPNIKIIRKTVPGIKDLPVACKKLLE---EEGCDIVMALGMPGKAEKDKVCAHE 79 (156)
T ss_dssp CEEEEEEESSCSSCCHHHHHHHHHHHCTTCEEEEEEESSGGGHHHHHHHHHH---HSCCSEEEEEECCCSSHHHHHHHHH
T ss_pred cEEEEEEEecchHHHHHHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHHHh---cCCCCEEEEecccCCcchhHHHHHH
Confidence 4799999988876667889999999999866 477788888877766654 35588777643 3333321
Q ss_pred ---h--hhhhccCCcEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 028883 129 ---G--VAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 187 (202)
Q Consensus 129 ---g--vvA~~T~~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~ 187 (202)
| -++-.|.+|||...+.... .-.+ -+. +-..|.+..||..|++++.+
T Consensus 80 vs~Gl~~v~L~~~vPV~~gt~~~~e-qa~~r~~g-----------~k~~nKG~EaA~aaiem~~l 132 (156)
T 2b99_A 80 ASLGLMLAQLMTNKHIIEVFVHEDE-AKDDKELD-----------WLAKRRAEEHAENVYYLLFK 132 (156)
T ss_dssp HHHHHHHHHHHHTCCEEEEECCGGG-SSSHHHHH-----------HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhCCCEEEEeCCCHH-HHHHHhhc-----------chhhhhHHHHHHHHHHHHHH
Confidence 1 1223588999988333211 1122 211 11237889999999999875
No 203
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=60.96 E-value=37 Score=27.57 Aligned_cols=75 Identities=11% Similarity=0.095 Sum_probs=45.0
Q ss_pred CCeEEEEecCCCCHH------HHHHHHHHHHHhCCC---eEEEEEccCCCchHHHHHHHHHhhc-CceEEEEecCCc---
Q 028883 58 APIVGIIMESDLDLP------VMNDAARTLSDFGVP---YEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVE--- 124 (202)
Q Consensus 58 ~~~V~IimGS~SD~~------v~~~a~~~L~~~gi~---~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViIa~AG~a--- 124 (202)
+++|+||+=|+.=.+ -..-.++.|+++|+. ....++. -.++.+.+-++++.++ ++++||+..|.+
T Consensus 3 ~~rv~IIttGdEl~~G~i~D~n~~~L~~~L~~~G~~~~v~~~~iV~--Dd~~~I~~al~~a~~~~~~DlVitTGGtg~g~ 80 (195)
T 1di6_A 3 TLRIGLVSISDRASSGVYQDKGIPALEEWLTSALTTPFELETRLIP--DEQAIIEQTLCELVDEMSCHLVLTTGGTGPAR 80 (195)
T ss_dssp CEEEEEEEEECC-------CCHHHHHHHHHHHHBCSCEEEEEEEEE--SCHHHHHHHHHHHHHTSCCSEEEEESCCSSST
T ss_pred CCEEEEEEECCCCCCCeEEchHHHHHHHHHHHcCCCCceEEEEEeC--CCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 468888886654321 123467788999986 2334432 3455666666666553 689999887775
Q ss_pred -Cchhhhhhhc
Q 028883 125 -AHLSGVAAAN 134 (202)
Q Consensus 125 -a~LpgvvA~~ 134 (202)
...+-+++..
T Consensus 81 ~D~T~ea~~~~ 91 (195)
T 1di6_A 81 RDVTPDATLAV 91 (195)
T ss_dssp TCCHHHHHHHT
T ss_pred CccHHHHHHHH
Confidence 3455555544
No 204
>1ejb_A Lumazine synthase; analysis, inhibitor complex, vitamin biosynthesis transferase; HET: INJ; 1.85A {Saccharomyces cerevisiae} SCOP: c.16.1.1 PDB: 2jfb_A
Probab=60.71 E-value=33 Score=27.79 Aligned_cols=63 Identities=13% Similarity=0.085 Sum_probs=49.2
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHHhCCC---e-EEEEEccCCCchHHHHHHHHHh--hcCceEEEEe
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVP---Y-EIKILPPHQNCKEALSYALSAK--ERGIKIIIVG 120 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~---~-ev~V~SaHRtp~~l~~~~~~~~--~~g~~ViIa~ 120 (202)
..+++||.+.-.+. .-.+.|.+.|++.|+. + .++|-++.=.|--..++++... +..++.||+.
T Consensus 16 ~~ri~IV~arfn~~I~~~Ll~gA~~~L~~~Gv~~~~i~v~~VPGafEiP~aak~la~~~~~~~~~yDavIaL 87 (168)
T 1ejb_A 16 KIRVGIIHARWNRVIIDALVKGAIERMASLGVEENNIIIETVPGSYELPWGTKRFVDRQAKLGKPLDVVIPI 87 (168)
T ss_dssp TCCEEEEECCTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEECSSGGGHHHHHHHHHHHHHHTTCCCSEEEEE
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHhhccccCCCcCEEEEe
Confidence 36899999999988 7888999999999986 2 3578888888888777765332 3458888874
No 205
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=60.66 E-value=59 Score=27.11 Aligned_cols=76 Identities=11% Similarity=-0.114 Sum_probs=49.1
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhC-CCeEEEEEccCCCchHH-HHHHHHHhhcCceEEEEecCCcCc--hhhhh
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFG-VPYEIKILPPHQNCKEA-LSYALSAKERGIKIIIVGDGVEAH--LSGVA 131 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~g-i~~ev~V~SaHRtp~~l-~~~~~~~~~~g~~ViIa~AG~aa~--Lpgvv 131 (202)
-+|.+++.++-|. ..++++.+.|+.+| +++++.-+.. +.+.+. .++.+...+..-+++|-++|+.-. |+.+.
T Consensus 35 d~ViLv~~~~~~~~~~~A~~~i~~~l~~~~~i~~e~~~vd~-~df~~~v~~i~~~i~~~~~~iivnlsGG~Ril~l~~l~ 113 (244)
T 2wte_A 35 DSLVIVVPSPIVSGTRAAIESLRAQISRLNYPPPRIYEIEI-TDFNLALSKILDIILTLPEPIISDLTMGMRMINTLILL 113 (244)
T ss_dssp SEEEEEEESSCCHHHHHHHHHHHHHHHHHTCCCEEEEEECC-CSHHHHHHHHHHHHTTSCSSEEEECSSSCHHHHHHHHH
T ss_pred CEEEEEeCCCcchhHHHHHHHHHHHHHHcCCCceEEEEECC-ccHHHHHHHHHHHHhhcCCcEEEEecCCchHHHHHHHH
Confidence 4788888876554 45566777777787 4888877775 444443 445555444322899988888654 56666
Q ss_pred hhcc
Q 028883 132 AANS 135 (202)
Q Consensus 132 A~~T 135 (202)
|+..
T Consensus 114 A~~l 117 (244)
T 2wte_A 114 GIIV 117 (244)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6653
No 206
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=60.57 E-value=24 Score=24.94 Aligned_cols=73 Identities=12% Similarity=0.008 Sum_probs=46.4
Q ss_pred eEEEEecCC---CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccC
Q 028883 60 IVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQ 136 (202)
Q Consensus 60 ~V~IimGS~---SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~ 136 (202)
.|.|.+-++ +.=+.++++...|+++|++|+..=+.- .++...++.+. .+...
T Consensus 16 ~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~--~~~~~~~l~~~-----------------------~g~~~ 70 (109)
T 1wik_A 16 SVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILE--DEEVRQGLKTF-----------------------SNWPT 70 (109)
T ss_dssp SEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSS--CHHHHHHHHHH-----------------------HSCCS
T ss_pred CEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCC--CHHHHHHHHHH-----------------------hCCCC
Confidence 466776654 555799999999999999987654443 34444444321 24467
Q ss_pred CcEEEecCCCCCCChhh-HHHhhc
Q 028883 137 ILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 137 ~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
.|+|= +.+...+|.| |..+.+
T Consensus 71 vP~if--i~g~~igG~d~l~~l~~ 92 (109)
T 1wik_A 71 YPQLY--VRGDLVGGLDIVKELKD 92 (109)
T ss_dssp SCEEE--CSSSEEECHHHHHHHHH
T ss_pred CCEEE--ECCEEEcCHHHHHHHHH
Confidence 78764 4455567766 665543
No 207
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=60.33 E-value=35 Score=22.72 Aligned_cols=34 Identities=21% Similarity=0.147 Sum_probs=25.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP 94 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S 94 (202)
..|-|...+. =|.++++...|+++|++|+..-+.
T Consensus 12 ~~v~ly~~~~--Cp~C~~~~~~L~~~gi~~~~~~v~ 45 (92)
T 3ic4_A 12 AEVLMYGLST--CPHCKRTLEFLKREGVDFEVIWID 45 (92)
T ss_dssp SSSEEEECTT--CHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred ceEEEEECCC--ChHHHHHHHHHHHcCCCcEEEEee
Confidence 4566665443 489999999999999999875443
No 208
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=60.13 E-value=67 Score=25.98 Aligned_cols=112 Identities=13% Similarity=0.127 Sum_probs=63.0
Q ss_pred CCeEEEEecCCCC--HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC--chhhhh--
Q 028883 58 APIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA--HLSGVA-- 131 (202)
Q Consensus 58 ~~~V~IimGS~SD--~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa--~Lpgvv-- 131 (202)
..+|++|.|.... ..-.+...+.|+++|++++.... .+.+...+.++++.. +.++|++....-+ ++..+.
T Consensus 140 ~~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~---~~~~~~~~~~~~l~~-~~dai~~~~D~~a~g~~~~l~~~ 215 (302)
T 2qh8_A 140 VKSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVEATA---LKSADVQSATQAIAE-KSDVIYALIDNTVASAIEGMIVA 215 (302)
T ss_dssp CCEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEEEEC---SSGGGHHHHHHHHGG-GCSEEEECSCHHHHTTHHHHHHH
T ss_pred CcEEEEEecCCCcchHHHHHHHHHHHHHcCCEEEEEec---CChHHHHHHHHHHhc-cCCEEEECCcHhHHHHHHHHHHH
Confidence 3589999987532 22346677788999998754322 234666666666543 4687777543211 121121
Q ss_pred hhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecC---ChhhHHHHHHHHHcc
Q 028883 132 AANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN---NAKNAALYAVKVLGI 187 (202)
Q Consensus 132 A~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~---n~~NAAl~Aa~IL~~ 187 (202)
+-...+||||. +.. .++ -| +++||..+ =|.-||-++.++|.-
T Consensus 216 ~~~~~i~vig~-------d~~-~~~---~~---~Lttv~~~~~~~G~~Aa~~l~~~l~g 260 (302)
T 2qh8_A 216 ANQAKTPVFGA-------ATS-YVE---RG---AIASLGFDYYQIGVQTADYVAAILEG 260 (302)
T ss_dssp HHHTTCCEEES-------SHH-HHH---TT---CSEEEECCHHHHHHHHHHHHHHHHTT
T ss_pred HHHcCCCEEEC-------CHH-HHh---CC---cEEEEeCCHHHHHHHHHHHHHHHHCc
Confidence 11357888873 111 122 13 46888765 355666666666643
No 209
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=59.38 E-value=82 Score=26.74 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=40.7
Q ss_pred ceEEEEecCCcCchhhhhhhccCCcEEEecCCCCCCChhh-H--HHhhcCCCCCeeeEEecCChhhHHHHHHHHHcc-CC
Q 028883 114 IKIIIVGDGVEAHLSGVAAANSQILVIRVPLLSEDWSEDD-V--INSIRMPSHVQVASVPRNNAKNAALYAVKVLGI-AD 189 (202)
Q Consensus 114 ~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~~~~l~G~D-L--lS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~-~d 189 (202)
++++|+=+|. +.+. =+...-+|+|-+|.... .++-. . -...+ .|. +.+=-.+..++..++..|..+ .|
T Consensus 253 aDlvI~raG~-~Tv~--E~~a~G~P~Ilip~p~~-~~~~Q~~NA~~l~~--~G~--a~~l~~~~~~~~~L~~~i~~ll~d 324 (365)
T 3s2u_A 253 ADLVICRAGA-LTVS--ELTAAGLPAFLVPLPHA-IDDHQTRNAEFLVR--SGA--GRLLPQKSTGAAELAAQLSEVLMH 324 (365)
T ss_dssp CSEEEECCCH-HHHH--HHHHHTCCEEECC------CCHHHHHHHHHHT--TTS--EEECCTTTCCHHHHHHHHHHHHHC
T ss_pred ceEEEecCCc-chHH--HHHHhCCCeEEeccCCC-CCcHHHHHHHHHHH--CCC--EEEeecCCCCHHHHHHHHHHHHCC
Confidence 5788876662 2222 23346789999998754 22322 2 22333 454 444123455677777777664 57
Q ss_pred HHHHHHHHH
Q 028883 190 EDLLERIRK 198 (202)
Q Consensus 190 ~~l~~kl~~ 198 (202)
++.+++|.+
T Consensus 325 ~~~~~~m~~ 333 (365)
T 3s2u_A 325 PETLRSMAD 333 (365)
T ss_dssp THHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777654
No 210
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=59.25 E-value=82 Score=26.74 Aligned_cols=125 Identities=11% Similarity=0.020 Sum_probs=65.4
Q ss_pred CeEEEEecCC-CCHHHHHHHHHHHHHhCCCeEEEEE-cc-----CCCchH--------HHHHHHHHhhcCceEEEEecCC
Q 028883 59 PIVGIIMESD-LDLPVMNDAARTLSDFGVPYEIKIL-PP-----HQNCKE--------ALSYALSAKERGIKIIIVGDGV 123 (202)
Q Consensus 59 ~~V~IimGS~-SD~~v~~~a~~~L~~~gi~~ev~V~-Sa-----HRtp~~--------l~~~~~~~~~~g~~ViIa~AG~ 123 (202)
+.|.|..||. ......+++.+.|++++..+ -+. +- ...|+. ..++ + ..++++|.-+|.
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~~~~~--v~~~g~~~~~~~~~~~~v~~~~~~~~~~~---l--~~~d~~v~~~G~ 311 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAHGRRV--ILSRGWADLVLPDDGADCFAIGEVNHQVL---F--GRVAAVIHHGGA 311 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHTTCCE--EECTTCTTCCCSSCGGGEEECSSCCHHHH---G--GGSSEEEECCCH
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHCCCeE--EEEeCCCcccccCCCCCEEEeCcCChHHH---H--hhCCEEEeCCCh
Confidence 5677777776 46788888889998887543 222 11 011211 0122 2 337999987665
Q ss_pred cCchhhhhhhccCCcEEEecCCCCCCChhh-HHHhhcCCCCCeeeEEecC-ChhhHHHHHHHHHccCCHHHHHHHHHHHh
Q 028883 124 EAHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGIADEDLLERIRKYVE 201 (202)
Q Consensus 124 aa~LpgvvA~~T~~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpVatV~I~-n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~ 201 (202)
..-+= |...-+|+|.+|.... ..... .+. + .|+.+ + ++ +..+..-++..|..+.|+++++++++.++
T Consensus 312 ~t~~E---a~~~G~P~i~~p~~~d-Q~~na~~l~--~--~g~g~--~-~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 380 (415)
T 1iir_A 312 GTTHV---AARAGAPQILLPQMAD-QPYYAGRVA--E--LGVGV--A-HDGPIPTFDSLSAALATALTPETHARATAVAG 380 (415)
T ss_dssp HHHHH---HHHHTCCEEECCCSTT-HHHHHHHHH--H--HTSEE--E-CSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred hHHHH---HHHcCCCEEECCCCCc-cHHHHHHHH--H--CCCcc--c-CCcCCCCHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 22222 2236699999998432 11111 222 2 24432 2 23 22244444444444467888888877653
No 211
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=59.23 E-value=46 Score=28.59 Aligned_cols=87 Identities=11% Similarity=0.054 Sum_probs=54.4
Q ss_pred CCCeEEEEecCCCC----HHHHHHHHHHHHHhCCCeEEEEEccCCC----------chHHHHHHHHHhhcCceEEEEec-
Q 028883 57 DAPIVGIIMESDLD----LPVMNDAARTLSDFGVPYEIKILPPHQN----------CKEALSYALSAKERGIKIIIVGD- 121 (202)
Q Consensus 57 ~~~~V~IimGS~SD----~~v~~~a~~~L~~~gi~~ev~V~SaHRt----------p~~l~~~~~~~~~~g~~ViIa~A- 121 (202)
.+.+|.||.||... ...++.+.+.+++.|+ ++.+...... |+.+.++.+.... ++.||.+.
T Consensus 57 ~~mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~--eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~--ADgiV~aSP 132 (279)
T 2fzv_A 57 PPVRILLLYGSLRARSFSRLAVEEAARLLQFFGA--ETRIFDPSDLPLPDQVQSDDHPAVKELRALSEW--SEGQVWCSP 132 (279)
T ss_dssp SCCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTC--EEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHH--CSEEEEEEE
T ss_pred CCCEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCC--EEEEEehhcCCCCccCccCCCHHHHHHHHHHHH--CCeEEEEcC
Confidence 45689999999753 3456677777887787 5555555443 4667778777766 56555554
Q ss_pred ----CCcCchhhhhh----------hccCCcEEEecCCCC
Q 028883 122 ----GVEAHLSGVAA----------ANSQILVIRVPLLSE 147 (202)
Q Consensus 122 ----G~aa~LpgvvA----------~~T~~PVIgVP~~~~ 147 (202)
++.+.|=.++- .+..+|+.-+-+.++
T Consensus 133 ~Yn~sipg~LKn~IDrl~~~~g~~~~l~gK~v~lv~tsG~ 172 (279)
T 2fzv_A 133 ERHGQITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVSGG 172 (279)
T ss_dssp EETTEECHHHHHHHHHSCSCBTTBCSSTTCEEEEEEECSS
T ss_pred ccccCcCHHHHHHHHHHhhhcccccccCCCEEEEEEECCC
Confidence 34444444442 234577776666543
No 212
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=59.12 E-value=91 Score=28.96 Aligned_cols=85 Identities=12% Similarity=0.015 Sum_probs=55.7
Q ss_pred CeEEEEecCCCC------HHHH---HHHHHHHHHhC-CCeEEEEEccCCCchHHHHHHHHH-hhcCceEEEEecCC--cC
Q 028883 59 PIVGIIMESDLD------LPVM---NDAARTLSDFG-VPYEIKILPPHQNCKEALSYALSA-KERGIKIIIVGDGV--EA 125 (202)
Q Consensus 59 ~~V~IimGS~SD------~~v~---~~a~~~L~~~g-i~~ev~V~SaHRtp~~l~~~~~~~-~~~g~~ViIa~AG~--aa 125 (202)
..|=.++||.-= ..+. +++.+-|+..| +|+++.--..=-+++...++.+++ ....++.||+.-.. .+
T Consensus 7 ~~~~~~~gsq~lyg~~~~~~v~~~~~~~~~~l~~~~~l~~~vv~~g~v~t~~~~~~~~~~~n~~~~vdgvi~~~~TFs~a 86 (500)
T 4f2d_A 7 YEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKLPCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPA 86 (500)
T ss_dssp CEEEEEEBCCSSSCTTHHHHHHHHHHHHHHHHHHHTCCSSEEEECCCBCSHHHHHHHHHHHHHCTTEEEEEEECCSCCCT
T ss_pred ceEEEEeccccccCHHHHHHHHHHHHHHHHHhccccCCCeEEEecCcCCCHHHHHHHHHHhccccCCcEEEEeCCcCccH
Confidence 356677777642 1334 44455566553 689998889999999999999999 56677777765433 22
Q ss_pred chhhhhhhccCCcEEEec
Q 028883 126 HLSGVAAANSQILVIRVP 143 (202)
Q Consensus 126 ~LpgvvA~~T~~PVIgVP 143 (202)
..---+.....+||+-.=
T Consensus 87 ~~~i~~l~~l~~PvL~~~ 104 (500)
T 4f2d_A 87 KMWINGLTMLNKPLLQFH 104 (500)
T ss_dssp HHHHHHHHHCCSCEEEEE
T ss_pred HHHHHHHHhcCCCEEEEe
Confidence 222223345789999853
No 213
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=59.00 E-value=13 Score=26.29 Aligned_cols=73 Identities=7% Similarity=-0.054 Sum_probs=45.5
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC-CchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCc
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ-NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQIL 138 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR-tp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~P 138 (202)
.|.|.+. +.=|+++++...|+++|++|+..-+.-+. ....+.+.+.. ..+....|
T Consensus 20 ~v~vy~~--~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~~~~~~l~~----------------------~~g~~tvP 75 (113)
T 3rhb_A 20 TVVIYSK--TWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLER----------------------LTGQHTVP 75 (113)
T ss_dssp SEEEEEC--TTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHHHHHHHHHH----------------------HHSCCSSC
T ss_pred CEEEEEC--CCChhHHHHHHHHHHcCCCCeEEEeecCCCChHHHHHHHHH----------------------HhCCCCcC
Confidence 3666655 45599999999999999999765554432 12233333321 12456788
Q ss_pred EEEecCCCCCCChhh-HHHhh
Q 028883 139 VIRVPLLSEDWSEDD-VINSI 158 (202)
Q Consensus 139 VIgVP~~~~~l~G~D-LlS~v 158 (202)
+|- +.+..++|.| +..+.
T Consensus 76 ~if--i~g~~igG~~~~~~~~ 94 (113)
T 3rhb_A 76 NVF--VCGKHIGGCTDTVKLN 94 (113)
T ss_dssp EEE--ETTEEEESHHHHHHHH
T ss_pred EEE--ECCEEEcCcHHHHHHH
Confidence 884 3455567777 66554
No 214
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=58.77 E-value=63 Score=25.26 Aligned_cols=81 Identities=10% Similarity=0.030 Sum_probs=50.9
Q ss_pred CCCeEEEEecCCC-----CHHHHHHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHHhhc-CceEEEEecCCc----C
Q 028883 57 DAPIVGIIMESDL-----DLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVE----A 125 (202)
Q Consensus 57 ~~~~V~IimGS~S-----D~~v~~~a~~~L~~~gi~~e-v~V~SaHRtp~~l~~~~~~~~~~-g~~ViIa~AG~a----a 125 (202)
.+++|+||+=|+. |..- .-.+..|+++|+... ..++ --.++.+.+.++++.++ ++++||+..|.+ .
T Consensus 9 ~~~~v~Ii~tGdE~g~i~D~n~-~~l~~~L~~~G~~v~~~~iv--~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D 85 (172)
T 1mkz_A 9 IPTRIAILTVSNRRGEEDDTSG-HYLRDSAQEAGHHVVDKAIV--KENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGD 85 (172)
T ss_dssp CCCEEEEEEECSSCCGGGCHHH-HHHHHHHHHTTCEEEEEEEE--CSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTC
T ss_pred CCCEEEEEEEeCCCCcccCccH-HHHHHHHHHCCCeEeEEEEe--CCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCC
Confidence 4478999885554 3332 336777889998643 3333 23566777777776665 589998887764 3
Q ss_pred chhhhhhhccCCcEE
Q 028883 126 HLSGVAAANSQILVI 140 (202)
Q Consensus 126 ~LpgvvA~~T~~PVI 140 (202)
..+-+++....+++.
T Consensus 86 ~t~ea~~~~~~~~l~ 100 (172)
T 1mkz_A 86 QAPEALLPLFDREVE 100 (172)
T ss_dssp CHHHHHGGGCSEECH
T ss_pred CHHHHHHHHhcccCC
Confidence 566666665544433
No 215
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=58.71 E-value=70 Score=25.71 Aligned_cols=109 Identities=17% Similarity=0.132 Sum_probs=61.2
Q ss_pred CeEEEEecCCCC--HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh---hhh-
Q 028883 59 PIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG---VAA- 132 (202)
Q Consensus 59 ~~V~IimGS~SD--~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg---vvA- 132 (202)
.+|++|.|.... ..-.+...+.|+++|++++.... .+.+...+.+++... ..++|++..-.- +++. +..
T Consensus 134 ~~I~~i~~~~~~~~~~r~~g~~~al~~~gi~~~~~~~---~~~~~~~~~~~~l~~-~~dai~~~~D~~-a~g~~~~l~~~ 208 (295)
T 3lft_A 134 KTIGALYSSSEDNSKTQVEEFKAYAEKAGLTVETFAV---PSTNEIASTVTVMTS-KVDAIWVPIDNT-IASGFPTVVSS 208 (295)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEE---SSGGGHHHHHHHHTT-TCSEEEECSCHH-HHHTHHHHHHH
T ss_pred cEEEEEeCCCCcchHHHHHHHHHHHHHcCCEEEEEec---CCHHHHHHHHHHHHh-cCCEEEECCchh-HHHHHHHHHHH
Confidence 589999987432 12356677888999998754332 134566666665543 578888764321 2221 111
Q ss_pred -hccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecC---ChhhHHHHHHHHHc
Q 028883 133 -ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN---NAKNAALYAVKVLG 186 (202)
Q Consensus 133 -~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~---n~~NAAl~Aa~IL~ 186 (202)
-...+||||. + |. .+.- | +++||..+ =|.-||.++.++|.
T Consensus 209 ~~~~~i~vig~-------d--~~--~~~~--~-~Lttv~~~~~~~G~~Aa~~l~~~l~ 252 (295)
T 3lft_A 209 NQSSKKPIYPS-------A--TA--MVEV--G-GLASVVIDQHDLGVATGKMIVQVLK 252 (295)
T ss_dssp TTTTCCCEEES-------S--HH--HHTT--T-CCEEEECCHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCEEeC-------C--HH--HHhc--C-cEEEEecCHHHHHHHHHHHHHHHHC
Confidence 1245677663 1 11 1222 2 56888766 35556666666664
No 216
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=58.61 E-value=30 Score=27.66 Aligned_cols=117 Identities=20% Similarity=0.173 Sum_probs=73.4
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHHhCCC----eEEEEEccCCCchHHHHHHHHHhhcCceEEEEec----CCcCc
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVP----YEIKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEAH 126 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~----~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A----G~aa~ 126 (202)
..+++||.+.-.+. .-.+.|.+.|++.|+. ..++|-++.=.|--..++++ +..++.||+.. |..-|
T Consensus 12 ~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG~VIrG~T~H 88 (154)
T 1rvv_A 12 GLKIGIVVGRFNDFITSKLLSGAEDALLRHGVDTNDIDVAWVPGAFEIPFAAKKMAE---TKKYDAIITLGTVIRGATTH 88 (154)
T ss_dssp TCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEEEEECCSSSH
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEeeeeecCCchH
Confidence 35799999999988 7888999999999986 24578888888877766654 35588888743 44444
Q ss_pred hhhh----------hhhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 028883 127 LSGV----------AAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 187 (202)
Q Consensus 127 Lpgv----------vA~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~ 187 (202)
-==| ++-.+.+||+..=....+. + -+.-. .| +-.-|.|..||..|.+++.+
T Consensus 89 fd~V~~~vs~Gl~~v~l~~~vPV~~GVLT~~~~---e-QA~~R--ag----~~~~nkG~eaA~aalem~~l 149 (154)
T 1rvv_A 89 YDYVCNEAAKGIAQAANTTGVPVIFGIVTTENI---E-QAIER--AG----TKAGNKGVDCAVSAIEMANL 149 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSCEEEEEEEESSH---H-HHHHT--EE----ETTEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCCCEEEEecCCCCH---H-HHHHH--hc----ccccchHHHHHHHHHHHHHH
Confidence 3221 1123667776552222111 0 00000 01 11125788899999988764
No 217
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=58.44 E-value=36 Score=27.38 Aligned_cols=26 Identities=23% Similarity=0.153 Sum_probs=18.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++-+ ...+++.|-+-|.
T Consensus 11 ~k~vlVTGas~gI--G~aia~~l~~~G~ 36 (264)
T 3ucx_A 11 DKVVVISGVGPAL--GTTLARRCAEQGA 36 (264)
T ss_dssp TCEEEEESCCTTH--HHHHHHHHHHTTC
T ss_pred CcEEEEECCCcHH--HHHHHHHHHHCcC
Confidence 5789999998854 4556666666664
No 218
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=58.39 E-value=14 Score=25.40 Aligned_cols=64 Identities=17% Similarity=0.048 Sum_probs=47.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEE-------E-EEccCCCchHHHHHHHHHhhcCce-EEEEecC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEI-------K-ILPPHQNCKEALSYALSAKERGIK-IIIVGDG 122 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev-------~-V~SaHRtp~~l~~~~~~~~~~g~~-ViIa~AG 122 (202)
..-.|-.|+-+|..-+++...-|...|++..+ | .++...+.++..+..++..+.|++ .||..+|
T Consensus 8 ~~~~vQvGaF~~~~~A~~l~~~L~~~G~~a~i~~~~~~yRV~vGpf~s~~~A~~~~~~L~~~g~~~~iv~~~~ 80 (81)
T 1uta_A 8 RRWMVQCGSFRGAEQAETVRAQLAFEGFDSKITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAG 80 (81)
T ss_dssp CBCCCBCCEESCHHHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCBTTTHHHHHHHHHHHHCCSCCBCCCCC
T ss_pred ccEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEEeCCcEEEEEECCcCCHHHHHHHHHHHHHcCCCcEEEeCCC
Confidence 35667889999999999999999999987432 2 234667778888888888777764 4444444
No 219
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=58.21 E-value=19 Score=29.28 Aligned_cols=47 Identities=11% Similarity=0.060 Sum_probs=31.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA 109 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~ 109 (202)
++|+||||..|..-+...+++.|-+-|.. |-++ .|..+.+++..+..
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~--Vvi~--~r~~~~~~~~~~~~ 52 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAK--LVFT--YRKERSRKELEKLL 52 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCE--EEEE--ESSGGGHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCE--EEEE--ECCHHHHHHHHHHH
Confidence 68999999877777788888888888863 3332 35555554444443
No 220
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=58.11 E-value=33 Score=28.05 Aligned_cols=44 Identities=16% Similarity=0.156 Sum_probs=26.8
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.+++++|+|+++ -+...+++.|-+-|. +| +-..|.++++.+..+
T Consensus 23 ~~k~~lVTGas~--GIG~aia~~la~~G~--~V--~~~~r~~~~~~~~~~ 66 (279)
T 3sju_A 23 RPQTAFVTGVSS--GIGLAVARTLAARGI--AV--YGCARDAKNVSAAVD 66 (279)
T ss_dssp --CEEEEESTTS--HHHHHHHHHHHHTTC--EE--EEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC--EE--EEEeCCHHHHHHHHH
Confidence 368999999998 456667777777775 23 233455555544433
No 221
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=57.91 E-value=32 Score=27.95 Aligned_cols=65 Identities=12% Similarity=0.052 Sum_probs=42.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC-----------------------CchHHHHHHHHHhhc--C
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ-----------------------NCKEALSYALSAKER--G 113 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR-----------------------tp~~l~~~~~~~~~~--g 113 (202)
+++++|+|.++.--+...+++.|.+-|. .+.+++-.+ .++.+.+++++..++ .
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGA--ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTC--EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCC--EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 6899999988765567778888877775 444443332 234445555544332 4
Q ss_pred ceEEEEecCCcC
Q 028883 114 IKIIIVGDGVEA 125 (202)
Q Consensus 114 ~~ViIa~AG~aa 125 (202)
++++|-.||...
T Consensus 104 id~li~nAg~~~ 115 (280)
T 3nrc_A 104 LDAIVHSIAFAP 115 (280)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCccCC
Confidence 689999988753
No 222
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=57.33 E-value=57 Score=25.38 Aligned_cols=25 Identities=8% Similarity=-0.011 Sum_probs=13.6
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
++.+|+|+++- +....++.|-+-|.
T Consensus 3 k~vlITGasgg--iG~~la~~l~~~G~ 27 (244)
T 2bd0_A 3 HILLITGAGKG--IGRAIALEFARAAR 27 (244)
T ss_dssp EEEEEETTTSH--HHHHHHHHHHHHTT
T ss_pred CEEEEECCCCh--HHHHHHHHHHHhcC
Confidence 56666776653 44455555554454
No 223
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=57.17 E-value=44 Score=30.81 Aligned_cols=60 Identities=17% Similarity=0.164 Sum_probs=48.1
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEE--ccCC-CchHHHHHHHHHhhcCceEEEEe
Q 028883 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL--PPHQ-NCKEALSYALSAKERGIKIIIVG 120 (202)
Q Consensus 61 V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~--SaHR-tp~~l~~~~~~~~~~g~~ViIa~ 120 (202)
+.=|..+.||..-++++.+.+++.|..++..++ ...| +|+.+.++++.+.+-|++.|-.+
T Consensus 116 ~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~ 178 (464)
T 2nx9_A 116 VFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALK 178 (464)
T ss_dssp EEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEc
Confidence 444668999999999999999999998776662 2333 78999999999999999865554
No 224
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=57.09 E-value=38 Score=27.37 Aligned_cols=118 Identities=14% Similarity=-0.006 Sum_probs=59.3
Q ss_pred CCeEEEEecCCCCHHH---HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhc--CceEEEEecCCcCchhhhhh
Q 028883 58 APIVGIIMESDLDLPV---MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER--GIKIIIVGDGVEAHLSGVAA 132 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v---~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~--g~~ViIa~AG~aa~LpgvvA 132 (202)
..+|+++.|...+... .+...+.|++.|+++.. +....-.++...+.++++-.+ ..+.|++.... .++ |++.
T Consensus 123 ~~~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~-~a~-g~~~ 199 (313)
T 2h3h_A 123 KGKVVIGTGSLTAMNSLQRIQGFKDAIKDSEIEIVD-ILNDEEDGARAVSLAEAALNAHPDLDAFFGVYAY-NGP-AQAL 199 (313)
T ss_dssp CSEEEEEESCSSCHHHHHHHHHHHHHHTTSSCEEEE-EEECSSCHHHHHHHHHHHHHHCTTCCEEEECSTT-HHH-HHHH
T ss_pred CCEEEEEECCCCCccHHHHHHHHHHHhcCCCCEEEE-eecCCCCHHHHHHHHHHHHHHCcCceEEEEcCCC-ccH-HHHH
Confidence 3689999987555433 23345666777887543 222334555544444443222 36888876433 222 4554
Q ss_pred hccCCcEEEecCCCCCCChhh-H---HHhhcCCCCCeeeEEecCChhhHHHHHHHHH
Q 028883 133 ANSQILVIRVPLLSEDWSEDD-V---INSIRMPSHVQVASVPRNNAKNAALYAVKVL 185 (202)
Q Consensus 133 ~~T~~PVIgVP~~~~~l~G~D-L---lS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL 185 (202)
++...- +|-.. ..-|+| . ...+. +|.+.+||..+ .+.-|..|+++|
T Consensus 200 al~~~G---~p~dv-~vvg~d~~~~~~~~~~--~g~~lttv~~~-~~~~g~~av~~l 249 (313)
T 2h3h_A 200 VVKNAG---KVGKV-KIVCFDTTPDILQYVK--EGVIQATMGQR-PYMMGYLSVTVL 249 (313)
T ss_dssp HHHHTT---CTTTS-EEEEECCCHHHHHHHH--HTSCSEEEECC-HHHHHHHHHHHH
T ss_pred HHHHcC---CCCCe-EEEEeCCCHHHHHHHH--cCCeEEEEecC-HHHHHHHHHHHH
Confidence 443321 23111 122333 2 22332 45567888654 445555555543
No 225
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=56.88 E-value=28 Score=24.21 Aligned_cols=34 Identities=18% Similarity=0.162 Sum_probs=26.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP 94 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S 94 (202)
+.|.+.+.+. =|.++++...|++.|++|+..=+.
T Consensus 22 ~~v~ly~~~~--Cp~C~~ak~~L~~~~i~y~~vdI~ 55 (103)
T 3nzn_A 22 GKVIMYGLST--CVWCKKTKKLLTDLGVDFDYVYVD 55 (103)
T ss_dssp SCEEEEECSS--CHHHHHHHHHHHHHTBCEEEEEGG
T ss_pred CeEEEEcCCC--CchHHHHHHHHHHcCCCcEEEEee
Confidence 4566665543 499999999999999999865443
No 226
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=56.59 E-value=4.6 Score=35.09 Aligned_cols=48 Identities=19% Similarity=0.197 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHhCCCe-------E-------------------EEEEccCCCchHHHHHHHHHhhcCceEEEE
Q 028883 72 PVMNDAARTLSDFGVPY-------E-------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (202)
Q Consensus 72 ~v~~~a~~~L~~~gi~~-------e-------------------v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa 119 (202)
.+++|+.+.|+++|+.. | .+|.+-.=|++.++++++++.++|++||+=
T Consensus 23 ~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~VilD 96 (496)
T 4gqr_A 23 DIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVD 96 (496)
T ss_dssp HHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 34577888888999841 1 233444447899999999999999999873
No 227
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=56.49 E-value=2.5 Score=36.17 Aligned_cols=82 Identities=20% Similarity=0.182 Sum_probs=45.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-----CCCchH----HHHHHHHHhhcCceEEE-EecCCcC-ch
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-----HQNCKE----ALSYALSAKERGIKIII-VGDGVEA-HL 127 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa-----HRtp~~----l~~~~~~~~~~g~~ViI-a~AG~aa-~L 127 (202)
..|||+=|+-..+.+.++..+.+-.-.+-|- --.+ -|+.+. +.+.++.+++.|++.|+ +|-..++ +|
T Consensus 25 ~~IGvfDsG~Ggltv~~~i~~~~P~~~~iy~--~D~~~~pyG~~s~~~i~~~~~~~~~~L~~~g~d~IVIACNTas~~~l 102 (290)
T 2vvt_A 25 EAIGLIDSGVGGLTVLKEALKQLPNERLIYL--GDTARCPYGPRPAEQVVQFTWEMADFLLKKRIKMLVIACNTATAVAL 102 (290)
T ss_dssp SCEEEEESSSTTHHHHHHHHHHCTTSCEEEE--ECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHCCCccEEEe--cccccCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCcchhHHHH
Confidence 3699993333448888888877643321110 0011 244444 44455556677887544 4443332 34
Q ss_pred hhhhhhccCCcEEEec
Q 028883 128 SGVAAANSQILVIRVP 143 (202)
Q Consensus 128 pgvvA~~T~~PVIgVP 143 (202)
. -+....+.||||+.
T Consensus 103 ~-~lr~~~~iPVigii 117 (290)
T 2vvt_A 103 E-EIKAALPIPVVGVI 117 (290)
T ss_dssp H-HHHHHCSSCEEESS
T ss_pred H-HHHHhCCCCEEccc
Confidence 4 34455789999964
No 228
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=56.12 E-value=31 Score=22.99 Aligned_cols=43 Identities=14% Similarity=0.028 Sum_probs=28.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
+.|.+.+. +.=+.++++...|++.|++|+..=+. ++...++.+
T Consensus 6 ~~v~~y~~--~~C~~C~~~~~~L~~~~i~~~~vdv~----~~~~~~l~~ 48 (89)
T 2klx_A 6 KEIILYTR--PNCPYCKRARDLLDKKGVKYTDIDAS----TSLRQEMVQ 48 (89)
T ss_dssp CCEEEESC--SCCTTTHHHHHHHHHHTCCEEEECSC----HHHHHHHHH
T ss_pred ceEEEEEC--CCChhHHHHHHHHHHcCCCcEEEECC----HHHHHHHHH
Confidence 45655543 33488999999999999998754332 444445543
No 229
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=55.44 E-value=1e+02 Score=26.86 Aligned_cols=83 Identities=11% Similarity=0.060 Sum_probs=57.3
Q ss_pred CCCeEEEEecCCCCHHHHHH----HHHHHHHhCCCeE--EEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh
Q 028883 57 DAPIVGIIMESDLDLPVMND----AARTLSDFGVPYE--IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 57 ~~~~V~IimGS~SD~~v~~~----a~~~L~~~gi~~e--v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv 130 (202)
+..+|++|.|... |...+ =..-+++.+.+.+ +...+.+-.|++-.+.++++-++|++||.+++|.. |+
T Consensus 148 k~~kIGfVgg~~~--p~v~~~~~GF~~G~k~~np~i~v~~~~~g~~~d~~kg~~~a~~l~~~G~DvIf~~~d~~----Gv 221 (356)
T 3s99_A 148 KKGIAGYIGSVPV--PEVVQGINSFMLGAQSVNPDFRVKVIWVNSWFDPGKEADAAKALIDQGVDIITQHTDST----AA 221 (356)
T ss_dssp SSCEEEEEECCCC--HHHHHHHHHHHHHHHTTCTTCEEEEEECSSSCCHHHHHHHHHHHHHTTCSEEEESSSSS----HH
T ss_pred CCCEEEEECCCcc--HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCChHHHHHHHHHHHhCCCcEEEECCCch----HH
Confidence 3578999999764 33322 2334455666644 44556667899999999988888999999999875 55
Q ss_pred hhhc--cCCcEEEecCC
Q 028883 131 AAAN--SQILVIRVPLL 145 (202)
Q Consensus 131 vA~~--T~~PVIgVP~~ 145 (202)
+.+. ..+-|||+--.
T Consensus 222 ~~aa~e~Gv~vIG~D~d 238 (356)
T 3s99_A 222 IQVAHDRGIKAFGQASD 238 (356)
T ss_dssp HHHHHHTTCEEEEEESC
T ss_pred HHHHHHcCCEEEEEcCc
Confidence 4332 45688987654
No 230
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=55.34 E-value=4.4 Score=34.24 Aligned_cols=76 Identities=24% Similarity=0.251 Sum_probs=48.2
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhC---------CCeEEEEEccCCCchHH----HHHHHHHhh-cCce-EEEEecCCc
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFG---------VPYEIKILPPHQNCKEA----LSYALSAKE-RGIK-IIIVGDGVE 124 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~g---------i~~ev~V~SaHRtp~~l----~~~~~~~~~-~g~~-ViIa~AG~a 124 (202)
.|+|+=.+---+.++++..+.|-.-. +|| --|+.+.+ .+.++.+++ .|++ ++|+|-..+
T Consensus 5 ~IgvfDSGvGGltv~~~i~~~lP~~~~iy~~D~~~~Py------G~~s~~~i~~~~~~~~~~L~~~~g~d~iViACNTas 78 (272)
T 1zuw_A 5 PIGVIDSGVGGLTVAKEIMRQLPKENIIYVGDTKRCPY------GPRPEEEVLQYTWELTNYLLENHHIKMLVIACNTAT 78 (272)
T ss_dssp CEEEEESSSTTHHHHHHHHHHSTTCCEEEEECGGGCCC------SSSCHHHHHHHHHHHHHHHHHHSCCSEEEECCHHHH
T ss_pred eEEEEeCCcchHHHHHHHHHhCCCCcEEEeccCCCCCC------CCCCHHHHHHHHHHHHHHHHhhcCCCEEEEeCchhh
Confidence 59999666667899998888764322 232 12445544 445566667 7887 555555555
Q ss_pred C-chhhhhhhccCCcEEEe
Q 028883 125 A-HLSGVAAANSQILVIRV 142 (202)
Q Consensus 125 a-~LpgvvA~~T~~PVIgV 142 (202)
+ +|. .+......||||+
T Consensus 79 ~~~l~-~lr~~~~iPVigi 96 (272)
T 1zuw_A 79 AIALD-DIQRSVGIPVVGV 96 (272)
T ss_dssp HHHHH-HHHHHCSSCEEES
T ss_pred HHHHH-HHHHHCCCCEEcc
Confidence 4 344 4445568999995
No 231
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=54.93 E-value=51 Score=27.05 Aligned_cols=44 Identities=18% Similarity=0.104 Sum_probs=28.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALS 108 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~ 108 (202)
+++++|+|+.+- +...+++.|-+-|. .+.+ ..|..+++.+..++
T Consensus 28 ~k~~lVTGas~G--IG~aia~~la~~G~--~V~~--~~r~~~~~~~~~~~ 71 (283)
T 3v8b_A 28 SPVALITGAGSG--IGRATALALAADGV--TVGA--LGRTRTEVEEVADE 71 (283)
T ss_dssp CCEEEEESCSSH--HHHHHHHHHHHTTC--EEEE--EESSHHHHHHHHHH
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHH
Confidence 579999999984 55667777777775 3333 34555555554443
No 232
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=54.80 E-value=15 Score=26.79 Aligned_cols=72 Identities=14% Similarity=0.127 Sum_probs=45.2
Q ss_pred CeEEEEecCC--CCHHHHHHHHHHHHHhCCC-eEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc
Q 028883 59 PIVGIIMESD--LDLPVMNDAARTLSDFGVP-YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 135 (202)
Q Consensus 59 ~~V~IimGS~--SD~~v~~~a~~~L~~~gi~-~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T 135 (202)
.+|.+++|+- |=.=...+..+.+++.|++ +++..++.+. +.++ . ..+++||...-..-.+. ...
T Consensus 19 ~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~~~~~~----~~~~---~--~~~DlIi~t~~l~~~~~----~~~ 85 (110)
T 3czc_A 19 VKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESASCSVGE----AKGL---A--SNYDIVVASNHLIHELD----GRT 85 (110)
T ss_dssp EEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECHHH----HHHH---G--GGCSEEEEETTTGGGTT----TSC
T ss_pred cEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEEeeHHH----Hhhc---c--CCCcEEEECCchHHHhC----cCC
Confidence 4688888875 3333444888999999999 8888887643 2222 1 23788888765543333 123
Q ss_pred CCcEEEec
Q 028883 136 QILVIRVP 143 (202)
Q Consensus 136 ~~PVIgVP 143 (202)
..||+++-
T Consensus 86 ~~~vi~i~ 93 (110)
T 3czc_A 86 NGKLIGLD 93 (110)
T ss_dssp SSEEEEES
T ss_pred CceEEEee
Confidence 34666654
No 233
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=54.34 E-value=39 Score=27.55 Aligned_cols=27 Identities=19% Similarity=0.148 Sum_probs=20.0
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
..++++|+|+.+ -+...+++.|-+-|.
T Consensus 27 ~~k~~lVTGas~--GIG~aia~~la~~G~ 53 (270)
T 3ftp_A 27 DKQVAIVTGASR--GIGRAIALELARRGA 53 (270)
T ss_dssp TTCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC
Confidence 368999999998 455666777766665
No 234
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=54.13 E-value=28 Score=27.87 Aligned_cols=61 Identities=7% Similarity=-0.046 Sum_probs=47.9
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHHhCCCe----EEEEEccCCCchHHHHHHHHHhhcCceEEEEec
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPY----EIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~----ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A 121 (202)
..+++||.+.-.+. .-.+.|.+.|++.|+.. .++|-++.=.|--..++++ +.+++.||+..
T Consensus 11 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~Gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 78 (157)
T 2obx_A 11 TVRIAVVRARWHADIVDQCVSAFEAEMADIGGDRFAVDVFDVPGAYEIPLHARTLAE---TGRYGAVLGTA 78 (157)
T ss_dssp CEEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---HTCCSEEEEEE
T ss_pred CCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 35899999999988 78889999999999874 3577788888877766654 35688888743
No 235
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=54.12 E-value=13 Score=31.15 Aligned_cols=81 Identities=15% Similarity=0.099 Sum_probs=45.5
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhC-CCeEEEEEccCCCchH-------------HHHHHHHHhhcCceEEEEecCCcC
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFG-VPYEIKILPPHQNCKE-------------ALSYALSAKERGIKIIIVGDGVEA 125 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~g-i~~ev~V~SaHRtp~~-------------l~~~~~~~~~~g~~ViIa~AG~aa 125 (202)
++.||-=.+|. ..-+...+.++.+- =..++...++...|.. +.+.++.++..|+|.||.+...+.
T Consensus 3 rilvINPnts~-~~T~~i~~~~~~~~~p~~~i~~~t~~~gp~~i~~~~d~~~a~~~l~~~~~~l~~~g~d~iviaCnt~~ 81 (245)
T 3qvl_A 3 RIQVINPNTSL-AMTETIGAAARAVAAPGTEILAVCPRAGVPSIEGHFDEAIAAVGVLEQIRAGREQGVDGHVIASFGDP 81 (245)
T ss_dssp EEEEECSSCCH-HHHHHHHHHHHHHCCTTEEEEEECCSSSCSSCCSHHHHHHHHHHHHHHHHHHHHHTCSEEEEC-CCCT
T ss_pred EEEEEeCCCCH-HHHHHHHHHHHHhcCCCCEEEEEeCCCCchhhcChhHHHHHHHHHHHHHHHHHHCCCCEEEEeCCChh
Confidence 34555544442 23244444555433 2356767776666542 233444556678885555555555
Q ss_pred chhhhhhhccCCcEEEe
Q 028883 126 HLSGVAAANSQILVIRV 142 (202)
Q Consensus 126 ~LpgvvA~~T~~PVIgV 142 (202)
+| -.+-...+.||||+
T Consensus 82 ~l-~~lr~~~~iPvigi 97 (245)
T 3qvl_A 82 GL-LAARELAQGPVIGI 97 (245)
T ss_dssp TH-HHHHHHCSSCEEEH
T ss_pred HH-HHHHHHcCCCEECc
Confidence 66 56667789999996
No 236
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=53.97 E-value=52 Score=26.32 Aligned_cols=43 Identities=12% Similarity=0.000 Sum_probs=27.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.++++|+|+++- +...+++.|-+-|. .+.+ .-|.++++.+..+
T Consensus 7 ~k~~lVTGas~G--IG~aia~~l~~~G~--~V~~--~~r~~~~~~~~~~ 49 (250)
T 3nyw_A 7 KGLAIITGASQG--IGAVIAAGLATDGY--RVVL--IARSKQNLEKVHD 49 (250)
T ss_dssp CCEEEEESTTSH--HHHHHHHHHHHHTC--EEEE--EESCHHHHHHHHH
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCC--EEEE--EECCHHHHHHHHH
Confidence 579999999984 45666777777675 3333 3455555554443
No 237
>1hqk_A 6,7-dimethyl-8-ribityllumazine synthase; analysi stability, vitamin biosynthesis, transferase; 1.60A {Aquifex aeolicus} SCOP: c.16.1.1 PDB: 1nqu_A* 1nqv_A* 1nqw_A* 1nqx_A*
Probab=53.88 E-value=31 Score=27.54 Aligned_cols=117 Identities=15% Similarity=0.131 Sum_probs=71.9
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHHhCCC----eEEEEEccCCCchHHHHHHHHHhhcCceEEEEec----CCcCc
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVP----YEIKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEAH 126 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~----~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A----G~aa~ 126 (202)
..+++||.+.-.+. .-.+.|.+.|++.|+. ..++|-++.=.|--..++++ +..++.||+.. |..-|
T Consensus 12 ~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIalG~VIrG~T~H 88 (154)
T 1hqk_A 12 GLRFGIVASRFNHALVDRLVEGAIDCIVRHGGREEDITLVRVPGSWEIPVAAGELAR---KEDIDAVIAIGVLIRGATPH 88 (154)
T ss_dssp TCCEEEEEECTTHHHHHHHHHHHHHHHHHTTCCGGGEEEEEESSGGGHHHHHHHHHT---CTTCCEEEEEEEEECCSSTH
T ss_pred CCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEeeeeecCCchH
Confidence 35799999999988 7788999999999986 24578888887777666653 34588888743 44444
Q ss_pred hhhh----------hhhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 028883 127 LSGV----------AAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 187 (202)
Q Consensus 127 Lpgv----------vA~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~ 187 (202)
-==| ++-.+.+||+..=....+.. .-+- + .| +-.-|.|..||..|.+++.+
T Consensus 89 fd~Va~~vs~gl~~v~l~~~vPV~~GVLT~~~~e--QA~~--R--ag----~~~~nkG~eaA~aalem~~l 149 (154)
T 1hqk_A 89 FDYIASEVSKGLANLSLELRKPITFGVITADTLE--QAIE--R--AG----TKHGNKGWEAALSAIEMANL 149 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCEEEEEEEESSHH--HHHH--H--EE----ETTEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCHH--HHHH--H--hc----ccccchHHHHHHHHHHHHHH
Confidence 3211 11135666665422221110 0000 0 01 11125788899999988764
No 238
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=53.56 E-value=35 Score=28.39 Aligned_cols=84 Identities=19% Similarity=0.168 Sum_probs=44.7
Q ss_pred CeEEEEecCCC--CHHHHHHHHHHHHHhCCCeEEEEEccCC--CchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhc
Q 028883 59 PIVGIIMESDL--DLPVMNDAARTLSDFGVPYEIKILPPHQ--NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 134 (202)
Q Consensus 59 ~~V~IimGS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR--tp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~ 134 (202)
.+|+||.=..+ -....+++.+.|++.|+.+.+.-..+.. .+. ...+..+....+++++|+ .|+.+.+-.++-+.
T Consensus 6 kki~ii~np~~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~vi~-~GGDGT~l~a~~~~ 83 (292)
T 2an1_A 6 KCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKN-VPTGTLAEIGQQADLAVV-VGGDGNMLGAARTL 83 (292)
T ss_dssp CEEEEECC-------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSS-CCEECHHHHHHHCSEEEE-CSCHHHHHHHHHHH
T ss_pred cEEEEEEcCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhccccc-ccccchhhcccCCCEEEE-EcCcHHHHHHHHHh
Confidence 46777765332 2356788889999999865432111100 000 000001111234676666 57777777776554
Q ss_pred --cCCcEEEecC
Q 028883 135 --SQILVIRVPL 144 (202)
Q Consensus 135 --T~~PVIgVP~ 144 (202)
...|++|+|.
T Consensus 84 ~~~~~P~lGI~~ 95 (292)
T 2an1_A 84 ARYDINVIGINR 95 (292)
T ss_dssp TTSSCEEEEBCS
T ss_pred hcCCCCEEEEEC
Confidence 4789999984
No 239
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=53.21 E-value=36 Score=26.09 Aligned_cols=48 Identities=17% Similarity=0.192 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEE
Q 028883 68 DLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKII 117 (202)
Q Consensus 68 ~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~Vi 117 (202)
-.|.+-+++|....+.+|...- |+-....-.++++|..+...+|+.|=
T Consensus 58 vddkewaekairfvkslgaqvl--iiiydqdqnrleefsrevrrrgfevr 105 (134)
T 2l69_A 58 VDDKEWAEKAIRFVKSLGAQVL--IIIYDQDQNRLEEFSREVRRRGFEVR 105 (134)
T ss_dssp CSSHHHHHHHHHHHHHHCCCCE--EEEECSCHHHHHHHHHHHHHTTCCEE
T ss_pred EccHHHHHHHHHHHHhcCCeEE--EEEEeCchhHHHHHHHHHHhcCceEE
Confidence 3689999999999999998654 44456778899999999999998764
No 240
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=53.18 E-value=53 Score=26.20 Aligned_cols=60 Identities=13% Similarity=0.245 Sum_probs=38.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH------------------------HHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY------------------------ALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~------------------------~~~~~~~-- 112 (202)
+++++|+|+.+ -+...+++.|-+-|.. + +-..|.++++.+. +++..++
T Consensus 9 gk~~lVTGas~--gIG~a~a~~l~~~G~~--V--~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 9 GKVALVTGASR--GIGKAIAELLAERGAK--V--IGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TCEEEESSCSS--HHHHHHHHHHHHTTCE--E--EEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCE--E--EEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 57999999998 4566777777777753 2 3334555544443 3333221
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 83 ~iD~lv~nAg~~ 94 (248)
T 3op4_A 83 GVDILVNNAGIT 94 (248)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 578888888864
No 241
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=53.11 E-value=83 Score=25.84 Aligned_cols=26 Identities=23% Similarity=0.100 Sum_probs=20.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+++- +...+++.|-+-|.
T Consensus 28 gk~~lVTGas~G--IG~aia~~la~~G~ 53 (299)
T 3t7c_A 28 GKVAFITGAARG--QGRSHAITLAREGA 53 (299)
T ss_dssp TCEEEEESTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 689999999984 55667777777775
No 242
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=53.08 E-value=69 Score=25.16 Aligned_cols=41 Identities=22% Similarity=0.215 Sum_probs=24.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 105 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~ 105 (202)
.++++|+|+++ -+....++.|-+-|. ++.+ ..|.++++.+.
T Consensus 9 ~k~vlITGas~--giG~~~a~~l~~~G~--~V~~--~~r~~~~~~~~ 49 (253)
T 3qiv_A 9 NKVGIVTGSGG--GIGQAYAEALAREGA--AVVV--ADINAEAAEAV 49 (253)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHH
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCC--EEEE--EcCCHHHHHHH
Confidence 57889999887 445666667766664 2322 33555444443
No 243
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=52.93 E-value=79 Score=25.52 Aligned_cols=32 Identities=16% Similarity=0.119 Sum_probs=23.9
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEE
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL 93 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~ 93 (202)
.+++++|+|+++- +...+++.|-+-|. .+.++
T Consensus 10 ~~k~~lVTGas~g--IG~aia~~la~~G~--~V~~~ 41 (286)
T 3uve_A 10 EGKVAFVTGAARG--QGRSHAVRLAQEGA--DIIAV 41 (286)
T ss_dssp TTCEEEEESTTSH--HHHHHHHHHHHTTC--EEEEE
T ss_pred CCCEEEEeCCCch--HHHHHHHHHHHCCC--eEEEE
Confidence 3689999999984 56778888888885 44444
No 244
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=52.86 E-value=56 Score=24.56 Aligned_cols=60 Identities=10% Similarity=0.018 Sum_probs=32.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCC--eEEEEEccCCCchHHHHHHHHHhhcCceEEEEecC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP--YEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~--~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG 122 (202)
-+++|++++.. -..+...|+.+|+. ++..+.+.-.-|+.+.++++.+.-..-+++..+-+
T Consensus 85 ~~v~ivT~~~~----~~~~~~~l~~~gl~~~f~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~igD~ 146 (187)
T 2wm8_A 85 VPGAAASRTSE----IEGANQLLELFDLFRYFVHREIYPGSKITHFERLQQKTGIPFSQMIFFDDE 146 (187)
T ss_dssp CCEEEEECCSC----HHHHHHHHHHTTCTTTEEEEEESSSCHHHHHHHHHHHHCCCGGGEEEEESC
T ss_pred ceEEEEeCCCC----hHHHHHHHHHcCcHhhcceeEEEeCchHHHHHHHHHHcCCChHHEEEEeCC
Confidence 46899998863 23345667888886 55443343344555555544432221245555444
No 245
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=52.83 E-value=65 Score=25.57 Aligned_cols=26 Identities=23% Similarity=0.275 Sum_probs=17.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++- +...+++.|-+-|.
T Consensus 7 ~k~~lVTGas~g--IG~aia~~l~~~G~ 32 (247)
T 2jah_A 7 GKVALITGASSG--IGEATARALAAEGA 32 (247)
T ss_dssp TCEEEEESCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 468888888874 45556666666564
No 246
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=52.71 E-value=12 Score=32.12 Aligned_cols=29 Identities=14% Similarity=0.213 Sum_probs=21.6
Q ss_pred ceEEEEecCCcCchhhhhhhccCCcEEEecCCC
Q 028883 114 IKIIIVGDGVEAHLSGVAAANSQILVIRVPLLS 146 (202)
Q Consensus 114 ~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~~ 146 (202)
++++|+.-.+..||+ +....|+|++--.+
T Consensus 262 a~~~i~~DsG~~HlA----aa~g~P~v~lfg~t 290 (349)
T 3tov_A 262 CNLLITNDSGPMHVG----ISQGVPIVALYGPS 290 (349)
T ss_dssp CSEEEEESSHHHHHH----HTTTCCEEEECSSC
T ss_pred CCEEEECCCCHHHHH----HhcCCCEEEEECCC
Confidence 688898878888873 45688999985443
No 247
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=52.61 E-value=83 Score=24.72 Aligned_cols=75 Identities=11% Similarity=0.049 Sum_probs=43.2
Q ss_pred CCCeEEEEecCCCC---HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh-
Q 028883 57 DAPIVGIIMESDLD---LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA- 132 (202)
Q Consensus 57 ~~~~V~IimGS~SD---~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA- 132 (202)
+...|++++.+.+| ....+.+.+.+++.|. ++.+......+++..++ +++.||........ ..+.
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~gi~~~a~~~g~--~~~~~~~~~~~~~~~~~-------~vdgiI~~~~~~~~--~~~~~ 75 (277)
T 3cs3_A 7 QTNIIGVYLADYGGSFYGELLEGIKKGLALFDY--EMIVCSGKKSHLFIPEK-------MVDGAIILDWTFPT--KEIEK 75 (277)
T ss_dssp CCCEEEEEECSSCTTTHHHHHHHHHHHHHTTTC--EEEEEESTTTTTCCCTT-------TCSEEEEECTTSCH--HHHHH
T ss_pred CCcEEEEEecCCCChhHHHHHHHHHHHHHHCCC--eEEEEeCCCCHHHHhhc-------cccEEEEecCCCCH--HHHHH
Confidence 44689999876554 3456677777888886 45555554444433222 47766665443221 2222
Q ss_pred -hccCCcEEEe
Q 028883 133 -ANSQILVIRV 142 (202)
Q Consensus 133 -~~T~~PVIgV 142 (202)
.....|||.+
T Consensus 76 l~~~~iPvV~~ 86 (277)
T 3cs3_A 76 FAERGHSIVVL 86 (277)
T ss_dssp HHHTTCEEEES
T ss_pred HHhcCCCEEEE
Confidence 2357898875
No 248
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=52.52 E-value=35 Score=31.11 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=24.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIK 91 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~ 91 (202)
.+|.|.+-+ .=|.+.++.+.|++.|++|+..
T Consensus 18 ~~v~vy~~~--~Cp~C~~~k~~L~~~~i~~~~~ 48 (598)
T 2x8g_A 18 AAVILFSKT--TCPYCKKVKDVLAEAKIKHATI 48 (598)
T ss_dssp CSEEEEECT--TCHHHHHHHHHHHHTTCCCEEE
T ss_pred CCEEEEECC--CChhHHHHHHHHHHCCCCcEEE
Confidence 357676655 4599999999999999998854
No 249
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=52.25 E-value=49 Score=21.95 Aligned_cols=45 Identities=13% Similarity=-0.030 Sum_probs=30.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
..|.+...+. =+.++++...|++.|++|+..=+. ..++...++.+
T Consensus 6 ~~v~ly~~~~--C~~C~~~~~~L~~~~i~~~~~di~--~~~~~~~~l~~ 50 (92)
T 2khp_A 6 VDVIIYTRPG--CPYCARAKALLARKGAEFNEIDAS--ATPELRAEMQE 50 (92)
T ss_dssp CCEEEEECTT--CHHHHHHHHHHHHTTCCCEEEEST--TSHHHHHHHHH
T ss_pred ccEEEEECCC--ChhHHHHHHHHHHcCCCcEEEECC--CCHHHHHHHHH
Confidence 4566665443 489999999999999998754333 34554455544
No 250
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=52.08 E-value=41 Score=25.53 Aligned_cols=74 Identities=15% Similarity=0.027 Sum_probs=48.3
Q ss_pred CeEEEEecCC---CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhcc
Q 028883 59 PIVGIIMESD---LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANS 135 (202)
Q Consensus 59 ~~V~IimGS~---SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T 135 (202)
..|.|.+-|+ ..=|.+.++.+.|+++|++|+..=+.. .|+...++.+ ..+..
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~--d~~~~~~L~~-----------------------~~G~~ 89 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQ--NPDIRAELPK-----------------------YANWP 89 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGG--CHHHHHHHHH-----------------------HHTCC
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCC--CHHHHHHHHH-----------------------HHCCC
Confidence 3577777654 345799999999999999987654433 3444333322 12456
Q ss_pred CCcEEEecCCCCCCChhh-HHHhhc
Q 028883 136 QILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 136 ~~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
.+|+|=+ .+..++|.| |..+.+
T Consensus 90 tvP~VfI--~G~~iGG~d~l~~l~~ 112 (135)
T 2wci_A 90 TFPQLWV--DGELVGGCDIVIEMYQ 112 (135)
T ss_dssp SSCEEEE--TTEEEESHHHHHHHHH
T ss_pred CcCEEEE--CCEEEEChHHHHHHHH
Confidence 7888753 455568888 776654
No 251
>1g2h_A Transcriptional regulatory protein TYRR homolog; protein structure, , DNA-binding domain, helix- turn-helix motif; NMR {Haemophilus influenzae} SCOP: a.4.1.12
Probab=52.04 E-value=6.5 Score=26.00 Aligned_cols=21 Identities=14% Similarity=0.442 Sum_probs=18.7
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 028883 180 YAVKVLGIADEDLLERIRKYV 200 (202)
Q Consensus 180 ~Aa~IL~~~d~~l~~kl~~~~ 200 (202)
-||+.||+....|+.||++|.
T Consensus 38 ~aA~~LGIsr~tL~rklkk~g 58 (61)
T 1g2h_A 38 KLAQRLGVSHTAIANKLKQYG 58 (61)
T ss_dssp HHHHHTTSCTHHHHHHHHTTT
T ss_pred HHHHHhCCCHHHHHHHHHHhC
Confidence 478899999999999999874
No 252
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=51.94 E-value=11 Score=32.19 Aligned_cols=29 Identities=7% Similarity=-0.166 Sum_probs=17.9
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVP 87 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~ 87 (202)
+++|.|| ++...-.-+....+.|++.|++
T Consensus 4 m~~vLiV-~g~~~~~~a~~l~~aL~~~g~~ 32 (259)
T 3rht_A 4 MTRVLYC-GDTSLETAAGYLAGLMTSWQWE 32 (259)
T ss_dssp --CEEEE-ESSCTTTTHHHHHHHHHHTTCC
T ss_pred CceEEEE-CCCCchhHHHHHHHHHHhCCce
Confidence 4678888 4444444556677788887763
No 253
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=51.65 E-value=49 Score=27.29 Aligned_cols=65 Identities=8% Similarity=0.104 Sum_probs=40.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc------------------------CCCchHHHHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP------------------------HQNCKEALSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa------------------------HRtp~~l~~~~~~~~~~-- 112 (202)
.++++|+|+.+..-+...+++.|-+-|.. +.++.- -..++.+.+++++..++
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAE--LAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCE--EEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 68999999998755666777777777753 333211 12334455555554432
Q ss_pred CceEEEEecCCcC
Q 028883 113 GIKIIIVGDGVEA 125 (202)
Q Consensus 113 g~~ViIa~AG~aa 125 (202)
+++++|-.||...
T Consensus 109 ~iD~lVnnAG~~~ 121 (293)
T 3grk_A 109 KLDFLVHAIGFSD 121 (293)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 5789999988753
No 254
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=51.48 E-value=58 Score=24.49 Aligned_cols=74 Identities=14% Similarity=0.029 Sum_probs=48.3
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCC-CeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhc
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGV-PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAAN 134 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi-~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~ 134 (202)
..|.|.|=|+-+. |++.+|.++|+.+|+ +|+..-+.- .|+ +.+.+++. ++.
T Consensus 20 ~~VvvF~Kgt~~~P~C~fc~~ak~lL~~~gv~~~~~~~v~~--~~~-~r~~l~~~----------------------sg~ 74 (118)
T 2wul_A 20 DKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD--DPE-LRQGIKDY----------------------SNW 74 (118)
T ss_dssp SSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCSCEEEETTS--CHH-HHHHHHHH----------------------HTC
T ss_pred CCEEEEEcCCCCCCCCHHHHHHHHHHHHhCCcCeEeecccC--CHH-HHHHHHHh----------------------ccC
Confidence 4688888777664 688999999999999 576544332 343 44444322 344
Q ss_pred cCCcEEEecCCCCCCChhh-HHHhhc
Q 028883 135 SQILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 135 T~~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
.+.|-|= +.+...+|.| |..+-+
T Consensus 75 ~TvPqIF--I~g~~IGG~Ddl~~l~~ 98 (118)
T 2wul_A 75 PTIPQVY--LNGEFVGGCDILLQMHQ 98 (118)
T ss_dssp CSSCEEE--ETTEEEECHHHHHHHHH
T ss_pred CCCCeEe--ECCEEECCHHHHHHHHH
Confidence 5677664 4555678888 776654
No 255
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=51.47 E-value=45 Score=21.33 Aligned_cols=37 Identities=19% Similarity=0.141 Sum_probs=26.5
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 69 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 69 SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
+.=+.++++...|++.|++|+..-+. ..++...++.+
T Consensus 9 ~~C~~C~~~~~~l~~~~i~~~~~~i~--~~~~~~~~~~~ 45 (82)
T 1fov_A 9 ETCPYCHRAKALLSSKGVSFQELPID--GNAAKREEMIK 45 (82)
T ss_dssp SSCHHHHHHHHHHHHHTCCCEEEECT--TCSHHHHHHHH
T ss_pred CCChhHHHHHHHHHHCCCCcEEEECC--CCHHHHHHHHH
Confidence 34489999999999999998765443 34555555554
No 256
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=51.43 E-value=61 Score=26.47 Aligned_cols=26 Identities=23% Similarity=0.149 Sum_probs=16.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++- +...+++.|-+-|.
T Consensus 4 ~k~~lVTGas~G--IG~aia~~la~~G~ 29 (264)
T 3tfo_A 4 DKVILITGASGG--IGEGIARELGVAGA 29 (264)
T ss_dssp TCEEEESSTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCccH--HHHHHHHHHHHCCC
Confidence 467778887763 44555666655564
No 257
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=51.33 E-value=94 Score=25.04 Aligned_cols=26 Identities=19% Similarity=0.045 Sum_probs=18.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+.+ -+...+++.|-+-|.
T Consensus 15 gk~~lVTGas~--gIG~a~a~~la~~G~ 40 (280)
T 3pgx_A 15 GRVAFITGAAR--GQGRSHAVRLAAEGA 40 (280)
T ss_dssp TCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCC
Confidence 57899999988 445666666666665
No 258
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=51.33 E-value=55 Score=25.35 Aligned_cols=82 Identities=10% Similarity=-0.038 Sum_probs=49.7
Q ss_pred CeEEEEecCCC----CHHHHHHHHHH-HHHhCCCeEEEEEccCCC-----------chHHHHHHHHHhhcCce-EEEEec
Q 028883 59 PIVGIIMESDL----DLPVMNDAART-LSDFGVPYEIKILPPHQN-----------CKEALSYALSAKERGIK-IIIVGD 121 (202)
Q Consensus 59 ~~V~IimGS~S----D~~v~~~a~~~-L~~~gi~~ev~V~SaHRt-----------p~~l~~~~~~~~~~g~~-ViIa~A 121 (202)
.+|.||.||.. =...++.+++. |++-|+ ++.+...... ++.+.++.+...+ ++ +||+.-
T Consensus 3 mkilii~gS~r~~g~t~~la~~i~~~~l~~~g~--~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~--aD~ii~~sP 78 (197)
T 2vzf_A 3 YSIVAISGSPSRNSTTAKLAEYALAHVLARSDS--QGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCN--ADGLIVATP 78 (197)
T ss_dssp EEEEEEECCSSTTCHHHHHHHHHHHHHHHHSSE--EEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHH--CSEEEEEEE
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHHHHHHCCC--eEEEEEccccCchhhcccccCcHHHHHHHHHHHH--CCEEEEEeC
Confidence 36999999953 34455556666 666665 5556665554 3466666666655 55 444444
Q ss_pred CCcCchhhhhh---------hccCCcEEEecC
Q 028883 122 GVEAHLSGVAA---------ANSQILVIRVPL 144 (202)
Q Consensus 122 G~aa~LpgvvA---------~~T~~PVIgVP~ 144 (202)
=-...+|+.+- .+..+||.-+-+
T Consensus 79 ~y~~~~p~~lK~~ld~l~~~~~~gK~~~~~~t 110 (197)
T 2vzf_A 79 IYKASYTGLLKAFLDILPQFALAGKAALPLAT 110 (197)
T ss_dssp CBTTBCCHHHHHHHTTSCTTTTTTCEEEEEEE
T ss_pred ccCCCCCHHHHHHHHhccccccCCCEEEEEEE
Confidence 44666777642 244678776655
No 259
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=51.28 E-value=38 Score=29.57 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=26.1
Q ss_pred HhhcCceEEEEecCCcCchhhhhhhccCCcEEEec
Q 028883 109 AKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVP 143 (202)
Q Consensus 109 ~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP 143 (202)
.++...+++++..+....++...|.....||+.+=
T Consensus 90 l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 90 LEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 34445789999888888888556667889998763
No 260
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=51.09 E-value=29 Score=30.00 Aligned_cols=69 Identities=12% Similarity=0.194 Sum_probs=42.9
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccC-Cc
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQ-IL 138 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~-~P 138 (202)
+|+|+.=.+.+ ++++.+.|++.|+.+.+ .. +..+.+ .+++++|++.| .+.+=.+.--... .|
T Consensus 31 ki~iv~~~~~~---~~~l~~~L~~~g~~v~~--~~--~~~~~~---------~~~DlvIvlGG-DGT~L~aa~~~~~~~P 93 (278)
T 1z0s_A 31 RAAVVYKTDGH---VKRIEEALKRLEVEVEL--FN--QPSEEL---------ENFDFIVSVGG-DGTILRILQKLKRCPP 93 (278)
T ss_dssp EEEEEESSSTT---HHHHHHHHHHTTCEEEE--ES--SCCGGG---------GGSSEEEEEEC-HHHHHHHHTTCSSCCC
T ss_pred EEEEEeCCcHH---HHHHHHHHHHCCCEEEE--cc--cccccc---------CCCCEEEEECC-CHHHHHHHHHhCCCCc
Confidence 69998876666 88999999999986543 22 111111 24687777654 4444333322222 89
Q ss_pred EEEecCC
Q 028883 139 VIRVPLL 145 (202)
Q Consensus 139 VIgVP~~ 145 (202)
|+|+.+-
T Consensus 94 ilGIN~G 100 (278)
T 1z0s_A 94 IFGINTG 100 (278)
T ss_dssp EEEEECS
T ss_pred EEEECCC
Confidence 9999863
No 261
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=51.06 E-value=60 Score=25.54 Aligned_cols=76 Identities=13% Similarity=0.175 Sum_probs=43.9
Q ss_pred CCCeEEEEecCCC-------CHHHHHHHHHHHH---HhCCCeEEEEEccCCCchHHHHHHHHHhhc-CceEEEEecCCc-
Q 028883 57 DAPIVGIIMESDL-------DLPVMNDAARTLS---DFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVE- 124 (202)
Q Consensus 57 ~~~~V~IimGS~S-------D~~v~~~a~~~L~---~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViIa~AG~a- 124 (202)
++++|+||+=|+. |.. ..-.+..|+ ++|+.....++ --.++.+.+.++++.++ ++++||+..|.+
T Consensus 4 ~~~rv~IistGdE~~~G~i~Dsn-~~~l~~~l~~l~~~G~~v~~~iv--~Dd~~~I~~~l~~~~~~~~~DlVittGG~g~ 80 (178)
T 2pbq_A 4 KKAVIGVVTISDRASKGIYEDIS-GKAIIDYLKDVIITPFEVEYRVI--PDERDLIEKTLIELADEKGCSLILTTGGTGP 80 (178)
T ss_dssp -CCEEEEEEECHHHHHTSSCCHH-HHHHHHHHHHHBCSCCEEEEEEE--CSCHHHHHHHHHHHHHTSCCSEEEEESCCSS
T ss_pred CCCEEEEEEeCCcCCCCCeecch-HHHHHHHHHHHHhCCCEEEEEEc--CCCHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 4578999985543 433 223555566 78886533332 23455666666665543 689998887764
Q ss_pred ---Cchhhhhhhcc
Q 028883 125 ---AHLSGVAAANS 135 (202)
Q Consensus 125 ---a~LpgvvA~~T 135 (202)
...+-+++...
T Consensus 81 g~~D~t~ea~~~~~ 94 (178)
T 2pbq_A 81 APRDVTPEATEAVC 94 (178)
T ss_dssp STTCCHHHHHHHHC
T ss_pred CCCCchHHHHHHHh
Confidence 34555555443
No 262
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=51.02 E-value=12 Score=34.21 Aligned_cols=49 Identities=20% Similarity=0.127 Sum_probs=31.4
Q ss_pred CCchHHHHHHHHHhhcCceEEEEecCCcCchhh--hhhh-----ccCCcEEEecCCC
Q 028883 97 QNCKEALSYALSAKERGIKIIIVGDGVEAHLSG--VAAA-----NSQILVIRVPLLS 146 (202)
Q Consensus 97 Rtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg--vvA~-----~T~~PVIgVP~~~ 146 (202)
++++..++.++.+++.+++.+|++-|- +.+-+ .++- ...+||||||-.-
T Consensus 88 ~~~~~~~~~~~~l~~~~Id~Lv~IGGd-gS~~~A~~L~~~~~~~g~~i~vIGiPkTI 143 (419)
T 3hno_A 88 QNRREYERLIEVFKAHDIGYFFYNGGG-DSADTCLKVSQLSGTLGYPIQAIHVPKTV 143 (419)
T ss_dssp -CHHHHHHHHHHHHHTTEEEEEEEESH-HHHHHHHHHHHHHHHTTCCCEEEEEECCT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEeCCc-hHHHHHHHHHHHHHHhCCCccEEEecccc
Confidence 355677777888888888877777653 22222 2222 1469999999763
No 263
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=50.84 E-value=47 Score=27.18 Aligned_cols=26 Identities=12% Similarity=0.116 Sum_probs=20.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+++ -+...+++.|-+-|.
T Consensus 32 gk~~lVTGas~--GIG~aia~~la~~G~ 57 (276)
T 3r1i_A 32 GKRALITGAST--GIGKKVALAYAEAGA 57 (276)
T ss_dssp TCEEEEESTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 57999999998 456677777777775
No 264
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=50.66 E-value=4.9 Score=33.85 Aligned_cols=82 Identities=17% Similarity=0.105 Sum_probs=46.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC-----CCchHHHHHH----HHHhhcCceEE-EEecCCcCc-h
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH-----QNCKEALSYA----LSAKERGIKII-IVGDGVEAH-L 127 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH-----Rtp~~l~~~~----~~~~~~g~~Vi-Ia~AG~aa~-L 127 (202)
..|||+=|+-..+.+.++..+.+-.-.+ -.---.+| |+.+.+.+++ +.+++.|++.| |+|-..++. +
T Consensus 13 ~~IGv~DsG~Ggltv~~~i~~~~P~~~~--iy~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~~~l 90 (273)
T 2oho_A 13 RPIGFLDSGVGGLTVVCELIRQLPHEKI--VYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKMIVFACNTATAVAW 90 (273)
T ss_dssp CCEEEEESSSTTHHHHHHHHHHCTTCCE--EEEECGGGCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHCCCCCE--EEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchHhHHHH
Confidence 3699993333348888888887643321 11111222 5556555544 45566788744 444443322 3
Q ss_pred hhhhhhccCCcEEEec
Q 028883 128 SGVAAANSQILVIRVP 143 (202)
Q Consensus 128 pgvvA~~T~~PVIgVP 143 (202)
. -+......||||+.
T Consensus 91 ~-~lr~~~~iPvigi~ 105 (273)
T 2oho_A 91 E-EVKAALDIPVLGVV 105 (273)
T ss_dssp H-HHHHHCSSCEEESH
T ss_pred H-HHHHhCCCCEEecc
Confidence 4 45566789999953
No 265
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=50.50 E-value=1.1e+02 Score=25.40 Aligned_cols=65 Identities=12% Similarity=0.164 Sum_probs=43.5
Q ss_pred eEEEEecCCCC--HHHHHHHHHHHHHhCCCeEEEE--EccCCCchHHHHHHHHHhhcCceEEEEecCCc
Q 028883 60 IVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKI--LPPHQNCKEALSYALSAKERGIKIIIVGDGVE 124 (202)
Q Consensus 60 ~V~IimGS~SD--~~v~~~a~~~L~~~gi~~ev~V--~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a 124 (202)
+|++|.|.... ..-.+--.+.+++.|.++++.+ .+.+-.|+.-.+.++++-+++.++|++.++..
T Consensus 131 ~Ig~i~g~~~~~~~~r~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~a~~ll~~~~daI~~~~d~~ 199 (318)
T 2fqx_A 131 AVGFIVGMELGMMPLFEAGFEAGVKAVDPDIQVVVEVANTFSDPQKGQALAAKLYDSGVNVIFQVAGGT 199 (318)
T ss_dssp EEEEEESCCSTTTHHHHHHHHHHHHHHCTTCEEEEEECSCSSCHHHHHHHHHHHHHTTCCEEEEECGGG
T ss_pred EEEEEeCcccHHHHHHHHHHHHHHHHHCCCCEEEEEEccCccCHHHHHHHHHHHHHCCCcEEEECCCCC
Confidence 89999886432 2223344567778888766543 33445677777777776667899999988754
No 266
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=50.50 E-value=61 Score=25.90 Aligned_cols=43 Identities=14% Similarity=0.069 Sum_probs=26.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.++++|+|+++ -+...+++.|-+-|. .+ +-..|.++++.+..+
T Consensus 6 ~k~vlVTGas~--gIG~aia~~l~~~G~--~V--~~~~r~~~~~~~~~~ 48 (257)
T 3imf_A 6 EKVVIITGGSS--GMGKGMATRFAKEGA--RV--VITGRTKEKLEEAKL 48 (257)
T ss_dssp TCEEEETTTTS--HHHHHHHHHHHHTTC--EE--EEEESCHHHHHHHHH
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC--EE--EEEeCCHHHHHHHHH
Confidence 57889999887 456667777777775 23 223455555544443
No 267
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=50.07 E-value=32 Score=27.82 Aligned_cols=125 Identities=9% Similarity=-0.014 Sum_probs=70.7
Q ss_pred CCCCCeEEEEecCCC------CHHHHHHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHHhhcCceEEEEecCCc---
Q 028883 55 STDAPIVGIIMESDL------DLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVE--- 124 (202)
Q Consensus 55 ~~~~~~V~IimGS~S------D~~v~~~a~~~L~~~gi~~e-v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~a--- 124 (202)
..++++|+||+-|+. |. -..-.+..|+++|+... ..++ --.++.+.+-++++..+++++||+..|.+
T Consensus 27 ~~~~~rvaIistGdEl~~G~~Ds-n~~~L~~~L~~~G~~v~~~~iv--~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 27 ELVVGRALVVVVDDRTAHGDEDH-SGPLVTELLTEAGFVVDGVVAV--EADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp --CCEEEEEEEECHHHHTTCCCS-HHHHHHHHHHHTTEEEEEEEEE--CSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred CCCCCEEEEEEECcccCCCCcCc-HHHHHHHHHHHCCCEEEEEEEe--CCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 335589999986642 22 23446677889997533 3333 23456666666655435689999887764
Q ss_pred -CchhhhhhhccCCcEEEecCCCCCCChhh-HHHhhcCCCCCee--------------eEEecCChhhHHHHHHHHHccC
Q 028883 125 -AHLSGVAAANSQILVIRVPLLSEDWSEDD-VINSIRMPSHVQV--------------ASVPRNNAKNAALYAVKVLGIA 188 (202)
Q Consensus 125 -a~LpgvvA~~T~~PVIgVP~~~~~l~G~D-LlS~vqMP~GvpV--------------atV~I~n~~NAAl~Aa~IL~~~ 188 (202)
...+-+++....++ +.|+. ++-.+.|.+|-|. .+++.-+.-.|++.+.+.+
T Consensus 104 ~D~t~eal~~l~~~~----------l~G~~~~f~~v~~kpG~p~a~lsR~~~G~~~~~~V~~LPGnP~aa~~~~~~l--- 170 (185)
T 3rfq_A 104 RDVTPESTREILDRE----------ILGIAEAIRASGLSAGIIDAGLSRGLAGVSGSTLVVNLAGSRYAVRDGMATL--- 170 (185)
T ss_dssp TCCHHHHHHTTCSEE----------CHHHHHHHHHHHHHTTCHHHHTCCCCEEEETTEEEEEECSSHHHHHHHHHHH---
T ss_pred cccHHHHHHHHhccc----------CccHHHHHHHHhcCCCCCceeeeehhhcccCCeEEEECCCCHHHHHHHHHHH---
Confidence 34566665554432 34555 4444555445443 2344445556777777654
Q ss_pred CHHHHHH
Q 028883 189 DEDLLER 195 (202)
Q Consensus 189 d~~l~~k 195 (202)
-|.|..-
T Consensus 171 ~P~L~~~ 177 (185)
T 3rfq_A 171 NPLAAHI 177 (185)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3555433
No 268
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=49.85 E-value=56 Score=28.40 Aligned_cols=51 Identities=14% Similarity=0.009 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCC
Q 028883 73 VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV 123 (202)
Q Consensus 73 v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~ 123 (202)
..+-+..+.+++|++.-.+++.-.|+.+.+.+.+..+...|++=|.|..|-
T Consensus 70 t~~~a~~i~~~~g~~~v~Hltc~~~~~~~l~~~L~~~~~~GI~nILaLrGD 120 (304)
T 3fst_A 70 THSIIKGIKDRTGLEAAPHLTCIDATPDELRTIARDYWNNGIRHIVALRGD 120 (304)
T ss_dssp HHHHHHHHHHHHCCCEEEEEESTTSCHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHhCCCeeEEeecCCCCHHHHHHHHHHHHHCCCCEEEEecCC
Confidence 344455666789999999999999999999999999999999888888775
No 269
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=49.85 E-value=61 Score=26.38 Aligned_cols=43 Identities=14% Similarity=0.051 Sum_probs=26.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
+++++|+|+.+- +...+++.|-+-|. ++ +-.-|.++++.+..+
T Consensus 26 gk~~lVTGas~g--IG~aia~~la~~G~--~V--~~~~r~~~~~~~~~~ 68 (271)
T 4ibo_A 26 GRTALVTGSSRG--LGRAMAEGLAVAGA--RI--LINGTDPSRVAQTVQ 68 (271)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC--EE--EECCSCHHHHHHHHH
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC--EE--EEEeCCHHHHHHHHH
Confidence 679999999884 45566777766674 33 223355555444433
No 270
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=49.52 E-value=6.7 Score=33.12 Aligned_cols=81 Identities=20% Similarity=0.204 Sum_probs=47.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-----CCCchHHHH----HHHHHhhcCceEEE-EecCCcC-ch
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-----HQNCKEALS----YALSAKERGIKIII-VGDGVEA-HL 127 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa-----HRtp~~l~~----~~~~~~~~g~~ViI-a~AG~aa-~L 127 (202)
..|+|+=.+--.+.++++..+.|-.-.+-| ---++ -|+.+.+.+ .++.+++.|++.|+ +|-..++ +|
T Consensus 8 ~~IgvfDSGvGGltv~~~i~~~lP~~~~iy--~~D~~~~PyG~~s~~~i~~~~~~~~~~L~~~g~d~IViACNTas~~~l 85 (276)
T 2dwu_A 8 SVIGVLDSGVGGLTVASEIIRQLPKESICY--IGDNERCPYGPRSVEEVQSFVFEMVEFLKQFPLKALVVACNTAAAATL 85 (276)
T ss_dssp CEEEEEESSSTTHHHHHHHHHHCTTSCEEE--EECGGGCCCTTSCHHHHHHHHHHHHHHHTTSCEEEEEECCHHHHHHHH
T ss_pred CeEEEEeCCcchHHHHHHHHHhCCCCcEEE--ccCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCcHHHHHH
Confidence 369999666778899988888764333211 11112 255555544 44556677887544 4433332 45
Q ss_pred hhhhhhccCCcEEEe
Q 028883 128 SGVAAANSQILVIRV 142 (202)
Q Consensus 128 pgvvA~~T~~PVIgV 142 (202)
.-+ ....+.||||+
T Consensus 86 ~~l-r~~~~iPVigi 99 (276)
T 2dwu_A 86 AAL-QEALSIPVIGV 99 (276)
T ss_dssp HHH-HHHCSSCEEES
T ss_pred HHH-HHHCCCCEEec
Confidence 544 34568999995
No 271
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=49.20 E-value=24 Score=30.13 Aligned_cols=85 Identities=14% Similarity=0.147 Sum_probs=43.8
Q ss_pred CeEEEEecCCC--CHHHHHHHHHHHHHhCCCeEEEEEccCCC------ch-------HHHHHHH-HHhhcCceEEEEecC
Q 028883 59 PIVGIIMESDL--DLPVMNDAARTLSDFGVPYEIKILPPHQN------CK-------EALSYAL-SAKERGIKIIIVGDG 122 (202)
Q Consensus 59 ~~V~IimGS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHRt------p~-------~l~~~~~-~~~~~g~~ViIa~AG 122 (202)
.+|+||.=-.+ -...++++.+.|++.|+.+.+.-..+... ++ ....+.+ +....+++++|++ |
T Consensus 5 ~ki~iI~n~~~~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vi~~-G 83 (307)
T 1u0t_A 5 RSVLLVVHTGRDEATETARRVEKVLGDNKIALRVLSAEAVDRGSLHLAPDDMRAMGVEIEVVDADQHAADGCELVLVL-G 83 (307)
T ss_dssp CEEEEEESSSGGGGSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CCCEEEE-E
T ss_pred CEEEEEEeCCCHHHHHHHHHHHHHHHHCCCEEEEecchhhhhhcccccccccccccccccccccccccccCCCEEEEE-e
Confidence 46787764333 35678899999999998765533222110 00 0111111 1223456777664 5
Q ss_pred CcCchhhhhhhc--cCCcEEEecC
Q 028883 123 VEAHLSGVAAAN--SQILVIRVPL 144 (202)
Q Consensus 123 ~aa~LpgvvA~~--T~~PVIgVP~ 144 (202)
+.+.+-.++-.. ...||+|++.
T Consensus 84 GDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 84 GDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCHHHHHHHHHhccCCCCEEEEeC
Confidence 566555555443 4789999985
No 272
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=48.82 E-value=64 Score=25.77 Aligned_cols=41 Identities=17% Similarity=0.100 Sum_probs=24.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 105 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~ 105 (202)
.++++|+|+++ -+...+++.|-+-|. ++.++ .|.++++.+.
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~ 47 (262)
T 1zem_A 7 GKVCLVTGAGG--NIGLATALRLAEEGT--AIALL--DMNREALEKA 47 (262)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHH
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHH
Confidence 46888999887 455666777766664 33332 3555444443
No 273
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=48.81 E-value=88 Score=25.08 Aligned_cols=42 Identities=5% Similarity=0.075 Sum_probs=25.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA 106 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~ 106 (202)
+++++|+|+.+- +...+++.|-+-|. ++.+ ..|.++++.+..
T Consensus 10 ~k~vlVTGas~g--IG~aia~~l~~~G~--~V~~--~~r~~~~~~~~~ 51 (262)
T 3pk0_A 10 GRSVVVTGGTKG--IGRGIATVFARAGA--NVAV--AGRSTADIDACV 51 (262)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHH
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHH
Confidence 578999999874 45666777777675 3333 345555544443
No 274
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=48.61 E-value=85 Score=25.13 Aligned_cols=60 Identities=17% Similarity=0.220 Sum_probs=37.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHH------------------------HHHhh--c
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYA------------------------LSAKE--R 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~------------------------~~~~~--~ 112 (202)
+++++|+|+.+- +...+++.|-+-|. ++.+ ..|.++++.++. ++..+ .
T Consensus 8 gk~~lVTGas~g--IG~a~a~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 8 GKKAIVIGGTHG--MGLATVRRLVEGGA--EVLL--TGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TCEEEEETCSSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 579999999984 55677777777775 3333 345555554443 32222 1
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 82 ~id~lv~nAg~~ 93 (255)
T 4eso_A 82 AIDLLHINAGVS 93 (255)
T ss_dssp SEEEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 468888888865
No 275
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=48.41 E-value=41 Score=27.27 Aligned_cols=78 Identities=17% Similarity=0.088 Sum_probs=45.7
Q ss_pred CeEEEEe-cCC--CCHHHHHHHHHHHHHhCCCeEEEEEc-cCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh-
Q 028883 59 PIVGIIM-ESD--LDLPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 133 (202)
Q Consensus 59 ~~V~Iim-GS~--SD~~v~~~a~~~L~~~gi~~ev~V~S-aHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~- 133 (202)
++|++|- +|. +.-+..+...+.|+++|+. +.+.. .++.++...+.+++ ++.||..-|....+-..+-.
T Consensus 28 ~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~--v~~~~i~~~~~~~~~~~l~~-----ad~I~l~GG~~~~l~~~L~~~ 100 (206)
T 3l4e_A 28 KTVTFIPTASTVEEVTFYVEAGKKALESLGLL--VEELDIATESLGEITTKLRK-----NDFIYVTGGNTFFLLQELKRT 100 (206)
T ss_dssp CEEEEECGGGGGCSCCHHHHHHHHHHHHTTCE--EEECCTTTSCHHHHHHHHHH-----SSEEEECCSCHHHHHHHHHHH
T ss_pred CEEEEECCCCCCCCHHHHHHHHHHHHHHcCCe--EEEEEecCCChHHHHHHHHh-----CCEEEECCCCHHHHHHHHHHC
Confidence 6888884 333 4446889999999999984 44443 12456655555443 56555544544443322211
Q ss_pred ----------ccCCcEEEec
Q 028883 134 ----------NSQILVIRVP 143 (202)
Q Consensus 134 ----------~T~~PVIgVP 143 (202)
....|++|.-
T Consensus 101 gl~~~l~~~~~~G~p~~G~s 120 (206)
T 3l4e_A 101 GADKLILEEIAAGKLYIGES 120 (206)
T ss_dssp THHHHHHHHHHTTCEEEEET
T ss_pred ChHHHHHHHHHcCCeEEEEC
Confidence 1257888864
No 276
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=48.39 E-value=68 Score=24.73 Aligned_cols=79 Identities=14% Similarity=0.184 Sum_probs=50.9
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeE--------------------EEEEccCCCchHHHHHHHHHhhcCceEEEE
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~e--------------------v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa 119 (202)
+|- +.|.-+-...++.....|..+|+++. +-++|.-+...++.+.++.++++|+++|..
T Consensus 47 ~I~-i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~I 125 (201)
T 3fxa_A 47 KIV-VAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGV 125 (201)
T ss_dssp CEE-EECCTHHHHHHHHHHHHHHHTTCCEEECCHHHHTTTGGGGCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEE
T ss_pred cEE-EEEecHHHHHHHHHHHHHHhcCCcEEEeCchHHHhhhhhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEE
Confidence 454 44444448899999999999998743 356677777777888888888888775544
Q ss_pred ecCCcCchhhhhhhccCCcEEEecC
Q 028883 120 GDGVEAHLSGVAAANSQILVIRVPL 144 (202)
Q Consensus 120 ~AG~aa~LpgvvA~~T~~PVIgVP~ 144 (202)
-.-...-| +-..+. +|-+|.
T Consensus 126 T~~~~s~l----~~~ad~-~l~~~~ 145 (201)
T 3fxa_A 126 TENPDSVI----AKEADI-FFPVSV 145 (201)
T ss_dssp ESCTTSHH----HHHCSE-EEECCC
T ss_pred ECCCCChh----HHhCCE-EEEcCC
Confidence 33333333 333443 444554
No 277
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=48.24 E-value=1.1e+02 Score=25.03 Aligned_cols=113 Identities=13% Similarity=0.147 Sum_probs=67.7
Q ss_pred CeEEEEecCCCC--HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCC--cCchhhh--hh
Q 028883 59 PIVGIIMESDLD--LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGV--EAHLSGV--AA 132 (202)
Q Consensus 59 ~~V~IimGS~SD--~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~--aa~Lpgv--vA 132 (202)
.+|+|+..+..+ ....+...+.++++|+.+.. .. -.....+.+..+....+ .+++.+.... .++...+ ++
T Consensus 141 k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~~~v~--~~-~~~~~~~~~~~~~l~~~-~d~i~~~~d~~~~~~~~~i~~~~ 216 (302)
T 3lkv_A 141 KSIGVVYNPGEANAVSLMELLKLSAAKHGIKLVE--AT-ALKSADVQSATQAIAEK-SDVIYALIDNTVASAIEGMIVAA 216 (302)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHHHTTCEEEE--EE-CSSGGGHHHHHHHHHTT-CSEEEECSCHHHHHTHHHHHHHH
T ss_pred CEEEEEeCCCcccHHHHHHHHHHHHHHcCCEEEE--Ee-cCChHHHHHHHHhccCC-eeEEEEeCCcchhhHHHHHHHHH
Confidence 589999766533 34567788888899986432 22 23455666666655443 5666554321 1222222 34
Q ss_pred hccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecC---ChhhHHHHHHHHHccCC
Q 028883 133 ANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN---NAKNAALYAVKVLGIAD 189 (202)
Q Consensus 133 ~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~---n~~NAAl~Aa~IL~~~d 189 (202)
.....||++. + + +++. .|. ++++.++ -|.-||.+|.|||.=..
T Consensus 217 ~~~~iPv~~~------~---~--~~v~--~G~-l~~~~~~~~~~G~~aa~~a~~IL~G~~ 262 (302)
T 3lkv_A 217 NQAKTPVFGA------A---T--SYVE--RGA-IASLGFDYYQIGVQTADYVAAILEGKE 262 (302)
T ss_dssp HHTTCCEEES------S---H--HHHH--TTC-SEEEECCHHHHHHHHHHHHHHHHTTCC
T ss_pred hhcCCceeec------c---c--cccc--CCc-eEEEecCHHHHHHHHHHHHHHHHCcCC
Confidence 5678899872 1 1 3333 453 5777777 57789999999996444
No 278
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=48.12 E-value=82 Score=25.37 Aligned_cols=41 Identities=12% Similarity=0.104 Sum_probs=26.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 105 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~ 105 (202)
.++++|+|+++ -+...+++.|.+-|. ++.+ ..|.++++.+.
T Consensus 21 ~k~vlVTGas~--gIG~aia~~l~~~G~--~V~~--~~r~~~~~~~~ 61 (273)
T 1ae1_A 21 GTTALVTGGSK--GIGYAIVEELAGLGA--RVYT--CSRNEKELDEC 61 (273)
T ss_dssp TCEEEEESCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHH
T ss_pred CCEEEEECCcc--hHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHH
Confidence 57899999987 456667777777674 3333 34555555443
No 279
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=48.02 E-value=96 Score=24.83 Aligned_cols=26 Identities=19% Similarity=0.052 Sum_probs=19.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+++- +...+++.|-+-|.
T Consensus 13 gk~vlVTGas~g--IG~~ia~~l~~~G~ 38 (278)
T 3sx2_A 13 GKVAFITGAARG--QGRAHAVRLAADGA 38 (278)
T ss_dssp TCEEEEESTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCh--HHHHHHHHHHHCCC
Confidence 679999999984 45666777766675
No 280
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=47.91 E-value=51 Score=25.59 Aligned_cols=60 Identities=13% Similarity=0.116 Sum_probs=45.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEec
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A 121 (202)
..|.|+.=++...+++++....|...|+..|+-.- |+-+++-.-+.+++..++..+|++.
T Consensus 9 ~Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~---r~~e~Lg~kIR~a~~~kvPy~lVVG 68 (130)
T 1v95_A 9 VDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFL---NTEVSLSQALEDVSRGGSPFAIVIT 68 (130)
T ss_dssp CTEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEEC---TTSSCHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecC---CCCCcHHHHHHHHHHcCCCEEEEEe
Confidence 34777777899999999999999999999887421 2246677777777777777666553
No 281
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=47.58 E-value=98 Score=24.11 Aligned_cols=62 Identities=6% Similarity=-0.078 Sum_probs=40.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC---------------CCchHHHHHHHHHhh----cCceEEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---------------QNCKEALSYALSAKE----RGIKIIIV 119 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH---------------Rtp~~l~~~~~~~~~----~g~~ViIa 119 (202)
.++++|+|+++ -+....++.|.+-|. ++.+.+-. ..++.+.++.++..+ .+++++|-
T Consensus 3 ~k~vlITGas~--gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~ 78 (236)
T 1ooe_A 3 SGKVIVYGGKG--ALGSAILEFFKKNGY--TVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78 (236)
T ss_dssp CEEEEEETTTS--HHHHHHHHHHHHTTE--EEEEEESSCCTTSSEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEEecCccccccccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 47899999998 567788888888774 44443311 113345555554433 35899999
Q ss_pred ecCCc
Q 028883 120 GDGVE 124 (202)
Q Consensus 120 ~AG~a 124 (202)
.||..
T Consensus 79 ~Ag~~ 83 (236)
T 1ooe_A 79 VAGGW 83 (236)
T ss_dssp CCCCC
T ss_pred CCccc
Confidence 99953
No 282
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=47.54 E-value=70 Score=26.21 Aligned_cols=43 Identities=12% Similarity=0.109 Sum_probs=27.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.++++|+|+.+- +...+++.|-+-|. + |+-.-|.++++.+..+
T Consensus 8 gk~vlVTGas~G--IG~aia~~la~~G~--~--V~~~~r~~~~~~~~~~ 50 (280)
T 3tox_A 8 GKIAIVTGASSG--IGRAAALLFAREGA--K--VVVTARNGNALAELTD 50 (280)
T ss_dssp TCEEEESSTTSH--HHHHHHHHHHHTTC--E--EEECCSCHHHHHHHHH
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCC--E--EEEEECCHHHHHHHHH
Confidence 578999999884 55667777777775 2 3334566655554443
No 283
>1vkr_A Mannitol-specific PTS system enzyme iiabc compone; phosphotransferase, transferase, kinase, sugar transport; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1vrv_A* 2few_B*
Probab=47.45 E-value=46 Score=25.05 Aligned_cols=72 Identities=11% Similarity=0.124 Sum_probs=50.7
Q ss_pred CCeEEEEecCCCCHHHH--HHHHHHHHHhCC-CeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh-
Q 028883 58 APIVGIIMESDLDLPVM--NDAARTLSDFGV-PYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 133 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~--~~a~~~L~~~gi-~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~- 133 (202)
..+|.+++|+--=-..| .+..+.|++.|+ +.++.-++.+..++ .+++||...- |+..+..
T Consensus 13 ~kkIlvVC~sGmgTS~ml~~klkk~~~e~gi~~~~V~~~~i~e~~~------------~~DlIist~~----l~~~~~~~ 76 (125)
T 1vkr_A 13 VRKIIVACDAGMGSSAMGAGVLRKKIQDAGLSQISVTNSAINNLPP------------DVDLVITHRD----LTERAMRQ 76 (125)
T ss_dssp CCEEEECCSSSSHHHHHHHHHHHHHHHHTTCTTSEEEECCTTCCCT------------TCSEEEEEHH----HHHHHHHH
T ss_pred ccEEEEECCCcHHHHHHHHHHHHHHHHHCCCceEEEEEeeHHHCCC------------CCCEEEECCc----cchhhhcc
Confidence 35799999887666666 688899999999 98988888776652 3688888653 3322211
Q ss_pred ccCCcEEEecCC
Q 028883 134 NSQILVIRVPLL 145 (202)
Q Consensus 134 ~T~~PVIgVP~~ 145 (202)
....|||.+.+-
T Consensus 77 ~~~ipVi~V~~~ 88 (125)
T 1vkr_A 77 VPQAQHISLTNF 88 (125)
T ss_dssp CTTSEEEEESCT
T ss_pred CCCCCEEEEecC
Confidence 247799988654
No 284
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=47.37 E-value=59 Score=26.88 Aligned_cols=60 Identities=8% Similarity=0.024 Sum_probs=42.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhh-------------c-CceEEEEecCCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE-------------R-GIKIIIVGDGVE 124 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~-------------~-g~~ViIa~AG~a 124 (202)
++.++|.|.- ...+.++..|.+.| +++.|+ .|++++..++.+++.. + +++++|..++..
T Consensus 119 ~~~vlvlGaG---g~g~a~a~~L~~~G--~~v~v~--~R~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 119 NQHVLILGAG---GATKGVLLPLLQAQ--QNIVLA--NRTFSKTKELAERFQPYGNIQAVSMDSIPLQTYDLVINATSAG 191 (272)
T ss_dssp TCEEEEECCS---HHHHTTHHHHHHTT--CEEEEE--ESSHHHHHHHHHHHGGGSCEEEEEGGGCCCSCCSEEEECCCC-
T ss_pred CCEEEEECCc---HHHHHHHHHHHHCC--CEEEEE--ECCHHHHHHHHHHccccCCeEEeeHHHhccCCCCEEEECCCCC
Confidence 3456666763 57888888999999 566664 7999999998876532 2 467888777654
Q ss_pred C
Q 028883 125 A 125 (202)
Q Consensus 125 a 125 (202)
.
T Consensus 192 ~ 192 (272)
T 1p77_A 192 L 192 (272)
T ss_dssp -
T ss_pred C
Confidence 3
No 285
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=47.31 E-value=69 Score=30.25 Aligned_cols=72 Identities=15% Similarity=-0.003 Sum_probs=52.0
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc--cCC-CchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh
Q 028883 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP--PHQ-NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA 132 (202)
Q Consensus 61 V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S--aHR-tp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA 132 (202)
+.=|..+.||+.-++++.+.+++.|..++..++- ..| +|+.+.++++.+.+-|++.|-.+.=.-...|..+.
T Consensus 133 ~vrIf~s~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~ 207 (539)
T 1rqb_A 133 VFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAY 207 (539)
T ss_dssp EEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHH
T ss_pred EEEEEEehhHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHH
Confidence 4446689999999999999999999987766632 222 67899999999999899865544322333455443
No 286
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=47.31 E-value=57 Score=26.24 Aligned_cols=78 Identities=10% Similarity=0.130 Sum_probs=44.5
Q ss_pred CeEEEEecCCCC-HH----HHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEec-C---CcCchhh
Q 028883 59 PIVGIIMESDLD-LP----VMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD-G---VEAHLSG 129 (202)
Q Consensus 59 ~~V~IimGS~SD-~~----v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A-G---~aa~Lpg 129 (202)
.+|+|++|+.|. .+ ..+...+.|++.|+. +.++.....+- .......+++++... | -.+.+.+
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~--v~~~~~~~~~~------~~~~~~~~d~v~~~~~~~~~e~~~~~~ 74 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGID--AYPVDPKEVDV------TQLKSMGFQKVFIALHGRGGEDGTLQG 74 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCE--EEEECTTTSCG------GGTTTTTEEEEEECCCSTTTSSSHHHH
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCe--EEEEecCchHH------HHhhccCCCEEEEcCCCCCCcchHHHH
Confidence 479999999874 22 446788888999974 55555443331 112224567665543 2 2334555
Q ss_pred hhhhccCCcEEEecCC
Q 028883 130 VAAANSQILVIRVPLL 145 (202)
Q Consensus 130 vvA~~T~~PVIgVP~~ 145 (202)
.+.. ..+|++|.+..
T Consensus 75 ~~e~-~g~~~~g~~~~ 89 (306)
T 1iow_A 75 MLEL-MGLPYTGSGVM 89 (306)
T ss_dssp HHHH-HTCCBSSCCHH
T ss_pred HHHH-cCCCccCCCHH
Confidence 4433 35666665543
No 287
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=47.23 E-value=79 Score=25.06 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=25.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~ 104 (202)
.++++|+|+++ -+...+++.|-+-|. ++.+ ..|.++++.+
T Consensus 14 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~ 53 (260)
T 2zat_A 14 NKVALVTASTD--GIGLAIARRLAQDGA--HVVV--SSRKQENVDR 53 (260)
T ss_dssp TCEEEESSCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHH
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHH
Confidence 57899999988 456667777777774 3333 3355554443
No 288
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=47.23 E-value=77 Score=25.34 Aligned_cols=26 Identities=19% Similarity=0.239 Sum_probs=18.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+.+- +...+++.|-+-|.
T Consensus 12 ~k~vlVTGas~g--IG~~ia~~l~~~G~ 37 (256)
T 3gaf_A 12 DAVAIVTGAAAG--IGRAIAGTFAKAGA 37 (256)
T ss_dssp TCEEEECSCSSH--HHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 578999999884 45566666666664
No 289
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=47.18 E-value=88 Score=28.42 Aligned_cols=60 Identities=17% Similarity=0.100 Sum_probs=43.3
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEe
Q 028883 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (202)
Q Consensus 57 ~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~ 120 (202)
....|.|+..+...+..+.+.+..|.+-|+.+|+- |+.-.++.+-.+.+.+.|+..+|.+
T Consensus 418 ~~~~V~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~----~~~~~~l~~q~k~A~~~g~~~~vii 477 (517)
T 4g85_A 418 TETQVLVASAQKKLLEERLKLVSELWDAGIKAELL----YKKNPKLLNQLQYCEEAGIPLVAII 477 (517)
T ss_dssp CCCCEEEEESSSSCHHHHHHHHHHHHHTTCCEEEC----SSSSCCHHHHHHHHHHHCCCEEEEE
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE----eCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 34578899888888999999999999999988873 3322345554566667788654444
No 290
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=47.08 E-value=64 Score=26.17 Aligned_cols=26 Identities=15% Similarity=0.078 Sum_probs=19.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+.+ -+...+++.|-+-|.
T Consensus 27 ~k~~lVTGas~--GIG~aia~~l~~~G~ 52 (277)
T 4fc7_A 27 DKVAFITGGGS--GIGFRIAEIFMRHGC 52 (277)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHTTTC
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCC
Confidence 68999999998 455666777766665
No 291
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=47.00 E-value=52 Score=27.83 Aligned_cols=64 Identities=17% Similarity=0.141 Sum_probs=36.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeE--------------------EEEEccCCCchHHHHHHHHHhhc--CceE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKER--GIKI 116 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~e--------------------v~V~SaHRtp~~l~~~~~~~~~~--g~~V 116 (202)
++|+||||+.+- +.+.+++.|-+-|...- ..+..=-..++.+.+++++..++ ++++
T Consensus 29 gKvalVTGas~G--IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi 106 (273)
T 4fgs_A 29 AKIAVITGATSG--IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV 106 (273)
T ss_dssp TCEEEEESCSSH--HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred CCEEEEeCcCCH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 689999999984 44556666655554211 11111223445555555554332 3577
Q ss_pred EEEecCCc
Q 028883 117 IIVGDGVE 124 (202)
Q Consensus 117 iIa~AG~a 124 (202)
+|--||..
T Consensus 107 LVNNAG~~ 114 (273)
T 4fgs_A 107 LFVNAGGG 114 (273)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 88777753
No 292
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=46.95 E-value=86 Score=24.84 Aligned_cols=24 Identities=17% Similarity=0.153 Sum_probs=14.1
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhC
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFG 85 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~g 85 (202)
++++|+|+++- +...+++.|-+-|
T Consensus 3 k~vlVTGas~g--IG~~ia~~l~~~G 26 (256)
T 1geg_A 3 KVALVTGAGQG--IGKAIALRLVKDG 26 (256)
T ss_dssp CEEEEETTTSH--HHHHHHHHHHHTT
T ss_pred CEEEEECCCCh--HHHHHHHHHHHCC
Confidence 56677777663 4455555555555
No 293
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=46.93 E-value=1.2e+02 Score=25.02 Aligned_cols=84 Identities=10% Similarity=0.158 Sum_probs=45.4
Q ss_pred CCCeEEEEecCCCCH----HHHHHHHHHHHH-hCCCeEEEEEccCCCch-HHHHHHHHHhhcCceEEEEecCCcCchhhh
Q 028883 57 DAPIVGIIMESDLDL----PVMNDAARTLSD-FGVPYEIKILPPHQNCK-EALSYALSAKERGIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 57 ~~~~V~IimGS~SD~----~v~~~a~~~L~~-~gi~~ev~V~SaHRtp~-~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv 130 (202)
+...|++++....+. |+..+...-+++ +. .|.+.+...+...+ +..++++.+..++++-||...- ... ...
T Consensus 67 ~s~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~-g~~~~~~~~~~~~~~~~~~~~~~l~~~~vdGiIi~~~-~~~-~~~ 143 (366)
T 3h5t_A 67 RAGAIGVLLTEDLTYAFEDMASVDFLAGVAQAAG-DTQLTLIPASPASSVDHVSAQQLVNNAAVDGVVIYSV-AKG-DPH 143 (366)
T ss_dssp -CCEEEEEESSCTTHHHHSHHHHHHHHHHHHHSS-SCEEEEEECCCCTTCCHHHHHHHHHTCCCSCEEEESC-CTT-CHH
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHh-hCCEEEEEcCCCccHHHHHHHHHHHhCCCCEEEEecC-CCC-hHH
Confidence 346899999875331 333333333332 33 56666666554332 4566777777788875555432 111 122
Q ss_pred hh--hccCCcEEEec
Q 028883 131 AA--ANSQILVIRVP 143 (202)
Q Consensus 131 vA--~~T~~PVIgVP 143 (202)
+. .....||+-+=
T Consensus 144 ~~~l~~~~iPvV~i~ 158 (366)
T 3h5t_A 144 IDAIRARGLPAVIAD 158 (366)
T ss_dssp HHHHHHHTCCEEEES
T ss_pred HHHHHHCCCCEEEEC
Confidence 22 23478988763
No 294
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=46.84 E-value=67 Score=25.17 Aligned_cols=46 Identities=15% Similarity=0.102 Sum_probs=30.5
Q ss_pred CCCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 56 TDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 56 ~~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
..+.+..+|+|+++- +....++.|-+-|. .+. -..|.++++.++.+
T Consensus 11 ~~~~k~vlVTGas~g--IG~~~a~~l~~~G~--~V~--~~~r~~~~~~~~~~ 56 (249)
T 3f9i_A 11 DLTGKTSLITGASSG--IGSAIARLLHKLGS--KVI--ISGSNEEKLKSLGN 56 (249)
T ss_dssp CCTTCEEEETTTTSH--HHHHHHHHHHHTTC--EEE--EEESCHHHHHHHHH
T ss_pred cCCCCEEEEECCCCh--HHHHHHHHHHHCCC--EEE--EEcCCHHHHHHHHH
Confidence 344689999999985 56677777877774 333 34466666655543
No 295
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae}
Probab=46.76 E-value=12 Score=37.15 Aligned_cols=45 Identities=13% Similarity=0.117 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhcCceEEEEecCCcCchhhh--hhh------ccCCcEEEecCCC
Q 028883 101 EALSYALSAKERGIKIIIVGDGVEAHLSGV--AAA------NSQILVIRVPLLS 146 (202)
Q Consensus 101 ~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv--vA~------~T~~PVIgVP~~~ 146 (202)
...+.++.+++.+++.+|++-|-. .+-+. ++- ....||||||-.-
T Consensus 471 ~~~~~~~~l~~~~Id~LvvIGGdg-S~~~a~~L~~~~~~~~~~~i~vIgiPkTI 523 (787)
T 3o8o_A 471 DLGTIAYYFQKNKLDGLIILGGFE-GFRSLKQLRDGRTQHPIFNIPMCLIPATV 523 (787)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESHH-HHHHHHHHHHHTTTCGGGGSCEEEEEBCT
T ss_pred hHHHHHHHHHHhCCCEEEEeCCch-HHHHHHHHHHHHHhcCccCCceeeccccc
Confidence 456677888888999888876643 33332 221 1369999999763
No 296
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=46.74 E-value=33 Score=27.47 Aligned_cols=61 Identities=8% Similarity=-0.143 Sum_probs=47.6
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHHhCCCe----EEEEEccCCCchHHHHHHHHHhhcCceEEEEec
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVPY----EIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~----ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A 121 (202)
..+++||.+.-.+. .-.+.|.+.|++.|+.. .++|-++.=.|--..++++ +..++.||+..
T Consensus 10 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG 77 (158)
T 1di0_A 10 SFKIAFIQARWHADIVDEARKSFVAELAAKTGGSVEVEIFDVPGAYEIPLHAKTLAR---TGRYAAIVGAA 77 (158)
T ss_dssp CEEEEEEEECTTHHHHHHHHHHHHHHHHHHHTTSEEEEEEEESSGGGHHHHHHHHHH---TSCCSEEEEEE
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEee
Confidence 35899999999988 77889999999999863 3577788887777766654 35688888743
No 297
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=46.57 E-value=94 Score=23.80 Aligned_cols=65 Identities=14% Similarity=0.067 Sum_probs=38.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC----------------------CCchHHHHHHHHHhhc----
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH----------------------QNCKEALSYALSAKER---- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH----------------------Rtp~~l~~~~~~~~~~---- 112 (202)
.++++|+|+++ -+....++.|-+-|-.+++.+.+-. ..++.+.++.++..++
T Consensus 3 ~k~vlItGasg--giG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 80 (250)
T 1yo6_A 3 PGSVVVTGANR--GIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD 80 (250)
T ss_dssp CSEEEESSCSS--HHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred CCEEEEecCCc--hHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence 35788999887 4566777777777732344433211 1234455555444322
Q ss_pred CceEEEEecCCcC
Q 028883 113 GIKIIIVGDGVEA 125 (202)
Q Consensus 113 g~~ViIa~AG~aa 125 (202)
+++++|-.||...
T Consensus 81 ~id~li~~Ag~~~ 93 (250)
T 1yo6_A 81 GLSLLINNAGVLL 93 (250)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCcccC
Confidence 5899999988644
No 298
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=46.46 E-value=75 Score=25.26 Aligned_cols=26 Identities=15% Similarity=0.116 Sum_probs=17.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++ -+...+++.|-+-|.
T Consensus 5 ~k~vlVTGas~--gIG~~ia~~l~~~G~ 30 (260)
T 2qq5_A 5 GQVCVVTGASR--GIGRGIALQLCKAGA 30 (260)
T ss_dssp TCEEEESSTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--hHHHHHHHHHHHCCC
Confidence 46788888877 345566666666663
No 299
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=46.41 E-value=1e+02 Score=24.52 Aligned_cols=40 Identities=13% Similarity=0.140 Sum_probs=24.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~ 104 (202)
.++++|+|+++- +...+++.|-+-|. ++.+ ..|.++++.+
T Consensus 9 ~k~vlVTGas~g--iG~~ia~~l~~~G~--~V~~--~~r~~~~~~~ 48 (260)
T 2ae2_A 9 GCTALVTGGSRG--IGYGIVEELASLGA--SVYT--CSRNQKELND 48 (260)
T ss_dssp TCEEEEESCSSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHH
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCC--EEEE--EeCCHHHHHH
Confidence 578899999874 45566666666664 3333 2355544443
No 300
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=46.39 E-value=88 Score=25.48 Aligned_cols=27 Identities=26% Similarity=0.213 Sum_probs=20.1
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
..++++|+|+++ -+...+++.|-+-|.
T Consensus 28 ~~k~~lVTGas~--GIG~aia~~la~~G~ 54 (280)
T 4da9_A 28 ARPVAIVTGGRR--GIGLGIARALAASGF 54 (280)
T ss_dssp CCCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCCEEEEecCCC--HHHHHHHHHHHHCCC
Confidence 367999999988 455667777777665
No 301
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=46.22 E-value=86 Score=25.47 Aligned_cols=41 Identities=10% Similarity=0.122 Sum_probs=27.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 105 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~ 105 (202)
.++++|+|+++ -+...+++.|.+-|. ++.++ -|.++++.+.
T Consensus 29 ~k~vlVTGas~--gIG~aia~~L~~~G~--~V~~~--~r~~~~~~~~ 69 (276)
T 2b4q_A 29 GRIALVTGGSR--GIGQMIAQGLLEAGA--RVFIC--ARDAEACADT 69 (276)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--CSCHHHHHHH
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHH
Confidence 57899999988 556777777877774 44443 4666555443
No 302
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=46.17 E-value=78 Score=25.31 Aligned_cols=118 Identities=20% Similarity=0.205 Sum_probs=74.6
Q ss_pred CCCeEEEEecCCCCH---HHHHHHHHHHHHhC-CC---eE-EEEEccCCCchHHHHHHHHHhhcCceEEEEec----CCc
Q 028883 57 DAPIVGIIMESDLDL---PVMNDAARTLSDFG-VP---YE-IKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVE 124 (202)
Q Consensus 57 ~~~~V~IimGS~SD~---~v~~~a~~~L~~~g-i~---~e-v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A----G~a 124 (202)
+..+++||.+.-.+. .-.+.|.+.|++.| +. ++ ++|-++.-.|--..+++++ ..++.||+.. |..
T Consensus 11 ~~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~v~~~~i~v~~VPGafEiP~aa~~la~~---~~yDavIaLG~VIrG~T 87 (156)
T 3nq4_A 11 PDARVAITIARFNQFINDSLLDGAVDALTRIGQVKDDNITVVWVPGAYELPLATEALAKS---GKYDAVVALGTVIRGGT 87 (156)
T ss_dssp TTCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCCTTSEEEEEESSTTTHHHHHHHHHHH---CSCSEEEEEEEEECCSS
T ss_pred CCCEEEEEEeeCcHHHHHHHHHHHHHHHHHcCCCcccceEEEEcCcHHHHHHHHHHHHhc---CCCCEEEEeeeeecCCc
Confidence 346899999999988 77889999999999 83 44 5788899988888777653 4578777643 555
Q ss_pred Cchhhh----------hhhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 028883 125 AHLSGV----------AAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 187 (202)
Q Consensus 125 a~Lpgv----------vA~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~ 187 (202)
-|-==| ++-.+.+||+..=+...+.. .-+. + .|. -.-|.|..||..|.+++.+
T Consensus 88 ~Hfd~Va~~v~~Gl~~v~L~~~vPV~~GVLT~~~~e--QA~~--R--ag~----~~~nKG~eaA~aalem~~l 150 (156)
T 3nq4_A 88 AHFEYVAGGASNGLASVAQDSGVPVAFGVLTTESIE--QAIE--R--AGT----KAGNKGAEAALTALEMINV 150 (156)
T ss_dssp THHHHHHHHHHHHHHHHHHHHCCCEEEEEEEESCHH--HHHH--H--BTS----TTCBHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCCCHH--HHHH--H--hCC----cccccHHHHHHHHHHHHHH
Confidence 553211 12235677764333221110 0111 1 010 0125788899999888764
No 303
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=46.04 E-value=1.2e+02 Score=25.71 Aligned_cols=126 Identities=10% Similarity=0.010 Sum_probs=65.3
Q ss_pred CeEEEEecCCC---CHHHHHHHHHHHHHhCCCeEEEEE-cc-----CCCchH--------HHHHHHHHhhcCceEEEEec
Q 028883 59 PIVGIIMESDL---DLPVMNDAARTLSDFGVPYEIKIL-PP-----HQNCKE--------ALSYALSAKERGIKIIIVGD 121 (202)
Q Consensus 59 ~~V~IimGS~S---D~~v~~~a~~~L~~~gi~~ev~V~-Sa-----HRtp~~--------l~~~~~~~~~~g~~ViIa~A 121 (202)
+.|.|..||.. .....+++.+.|+++++.+ -+. +- .+.|+. ..++. ..++++|.=+
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~--v~~~g~~~~~~~~~~~~v~~~~~~~~~~ll-----~~~d~~v~~~ 310 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRV--ILSRGWTELVLPDDRDDCFAIDEVNFQALF-----RRVAAVIHHG 310 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCE--EEECTTTTCCCSCCCTTEEEESSCCHHHHG-----GGSSEEEECC
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHCCCeE--EEEeCCccccccCCCCCEEEeccCChHHHh-----ccCCEEEecC
Confidence 55766677764 3456777888888887543 222 11 111211 12222 3379999866
Q ss_pred CCcCchhhhhhhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecC-ChhhHHHHHHHHHccCCHHHHHHHHHHH
Q 028883 122 GVEAHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGIADEDLLERIRKYV 200 (202)
Q Consensus 122 G~aa~LpgvvA~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~-n~~NAAl~Aa~IL~~~d~~l~~kl~~~~ 200 (202)
|...- .=|...-+|+|.+|.... ..... --+.+ .|+.+ + +. ...++.-++..|-.+.|+++++++++.+
T Consensus 311 G~~t~---~Ea~~~G~P~i~~p~~~d-Q~~na-~~l~~--~g~g~--~-~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~ 380 (416)
T 1rrv_A 311 SAGTE---HVATRAGVPQLVIPRNTD-QPYFA-GRVAA--LGIGV--A-HDGPTPTFESLSAALTTVLAPETRARAEAVA 380 (416)
T ss_dssp CHHHH---HHHHHHTCCEEECCCSBT-HHHHH-HHHHH--HTSEE--E-CSSSCCCHHHHHHHHHHHTSHHHHHHHHHHT
T ss_pred ChhHH---HHHHHcCCCEEEccCCCC-cHHHH-HHHHH--CCCcc--C-CCCCCCCHHHHHHHHHHhhCHHHHHHHHHHH
Confidence 64222 222336699999998432 11111 11122 35432 2 23 2234444444444447888988887765
Q ss_pred h
Q 028883 201 E 201 (202)
Q Consensus 201 ~ 201 (202)
+
T Consensus 381 ~ 381 (416)
T 1rrv_A 381 G 381 (416)
T ss_dssp T
T ss_pred H
Confidence 4
No 304
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A*
Probab=45.85 E-value=14 Score=35.08 Aligned_cols=46 Identities=26% Similarity=0.261 Sum_probs=31.1
Q ss_pred chHHHHHHHHHhhcCceEEEEecCCcCchhh--hhhhc-----cCCcEEEecCC
Q 028883 99 CKEALSYALSAKERGIKIIIVGDGVEAHLSG--VAAAN-----SQILVIRVPLL 145 (202)
Q Consensus 99 p~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg--vvA~~-----T~~PVIgVP~~ 145 (202)
++...+.++.+++.+++.+|++-|-. .+-+ .++-. ..+||||||-.
T Consensus 152 ~e~~~~~~~~l~~~~Id~LvvIGGdg-S~~~A~~L~e~~~~~~~~i~vIGiPkT 204 (555)
T 2f48_A 152 EEHYNKALFVAKENNLNAIIIIGGDD-SNTNAAILAEYFKKNGENIQVIGVPKT 204 (555)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESHH-HHHHHHHHHHHHHHTTCCCEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCc-HHHHHHHHHHHHHHhCCCCcEEEeccc
Confidence 45677888889999998887775543 2222 22222 27999999975
No 305
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=45.82 E-value=57 Score=25.89 Aligned_cols=28 Identities=18% Similarity=0.133 Sum_probs=20.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|++|+--+...+++.|-+.|.
T Consensus 20 ~k~vlITGas~~~giG~~~a~~l~~~G~ 47 (267)
T 3gdg_A 20 GKVVVVTGASGPKGMGIEAARGCAEMGA 47 (267)
T ss_dssp TCEEEETTCCSSSSHHHHHHHHHHHTSC
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHCCC
Confidence 5789999998544456677777777764
No 306
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=45.65 E-value=79 Score=25.63 Aligned_cols=63 Identities=11% Similarity=0.126 Sum_probs=41.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC--------------CCchHHHHHHHHHhh--cCceEEEEecC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------QNCKEALSYALSAKE--RGIKIIIVGDG 122 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH--------------Rtp~~l~~~~~~~~~--~g~~ViIa~AG 122 (202)
+++++|+|+++ -+...+++.|.+-|. +|.+++-. +.++.+.++.++..+ .+++++|-.||
T Consensus 28 gk~vlVTGas~--gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg 103 (266)
T 3uxy_A 28 GKVALVTGAAG--GIGGAVVTALRAAGA--RVAVADRAVAGIAADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAG 103 (266)
T ss_dssp TCEEEESSTTS--HHHHHHHHHHHHTTC--EEEECSSCCTTSCCSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEeCCHHHHHhhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 68999999998 566778888888785 33333211 123345555554433 25899999999
Q ss_pred CcC
Q 028883 123 VEA 125 (202)
Q Consensus 123 ~aa 125 (202)
...
T Consensus 104 ~~~ 106 (266)
T 3uxy_A 104 VIS 106 (266)
T ss_dssp CCC
T ss_pred CCC
Confidence 753
No 307
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=45.24 E-value=90 Score=24.38 Aligned_cols=26 Identities=15% Similarity=0.218 Sum_probs=15.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++-+ ....++.|-+-|.
T Consensus 5 ~k~vlITGas~gI--G~~~a~~l~~~G~ 30 (247)
T 3lyl_A 5 EKVALVTGASRGI--GFEVAHALASKGA 30 (247)
T ss_dssp TCEEEESSCSSHH--HHHHHHHHHHTTC
T ss_pred CCEEEEECCCChH--HHHHHHHHHHCCC
Confidence 4678888887643 3455555555553
No 308
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=45.15 E-value=1.1e+02 Score=23.80 Aligned_cols=25 Identities=16% Similarity=-0.032 Sum_probs=16.9
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
++++|+|+++ .+....++.|.+-|.
T Consensus 3 k~vlItGasg--giG~~~a~~l~~~G~ 27 (250)
T 2cfc_A 3 RVAIVTGASS--GNGLAIATRFLARGD 27 (250)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CEEEEeCCCc--hHHHHHHHHHHHCCC
Confidence 5778888876 445666666666663
No 309
>3e7l_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; 2.25A {Aquifex aeolicus} PDB: 4fth_A
Probab=45.11 E-value=9.8 Score=25.07 Aligned_cols=21 Identities=19% Similarity=0.341 Sum_probs=18.9
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 028883 180 YAVKVLGIADEDLLERIRKYV 200 (202)
Q Consensus 180 ~Aa~IL~~~d~~l~~kl~~~~ 200 (202)
.||+.|++....|+.||++|.
T Consensus 37 ~aA~~LGisr~tL~rklkk~g 57 (63)
T 3e7l_A 37 RTAEEIGIDLSNLYRKIKSLN 57 (63)
T ss_dssp HHHHHHTCCHHHHHHHHHHTT
T ss_pred HHHHHHCcCHHHHHHHHHHhC
Confidence 578999999999999999884
No 310
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=44.99 E-value=58 Score=27.53 Aligned_cols=71 Identities=11% Similarity=0.076 Sum_probs=49.1
Q ss_pred eEEEEecCCCCH--------------HHHHHHHHHHHHhCCCeEEEEEcc------CC-CchHHHHHHHHHhhcCceEEE
Q 028883 60 IVGIIMESDLDL--------------PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKIII 118 (202)
Q Consensus 60 ~V~IimGS~SD~--------------~v~~~a~~~L~~~gi~~ev~V~Sa------HR-tp~~l~~~~~~~~~~g~~ViI 118 (202)
.|.| ..+.||. +.+.++.+.+++.|+++++.++-. .| +|+.+.++++.+.+-|++.|-
T Consensus 96 ~v~i-~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 174 (298)
T 2cw6_A 96 EVVI-FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEIS 174 (298)
T ss_dssp EEEE-EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEEE
T ss_pred EEEE-EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 4555 6688887 566778888889999888877633 24 578999999999998987554
Q ss_pred EecCCcCchhhhh
Q 028883 119 VGDGVEAHLSGVA 131 (202)
Q Consensus 119 a~AG~aa~Lpgvv 131 (202)
.+-=.-...|.-+
T Consensus 175 l~DT~G~~~P~~~ 187 (298)
T 2cw6_A 175 LGDTIGVGTPGIM 187 (298)
T ss_dssp EEETTSCCCHHHH
T ss_pred ecCCCCCcCHHHH
Confidence 4422223345443
No 311
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=44.79 E-value=57 Score=26.62 Aligned_cols=26 Identities=15% Similarity=0.144 Sum_probs=20.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+.+- +...+++.|-+-|.
T Consensus 33 gk~~lVTGas~G--IG~aia~~la~~G~ 58 (275)
T 4imr_A 33 GRTALVTGSSRG--IGAAIAEGLAGAGA 58 (275)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 589999999984 55677777777775
No 312
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=44.76 E-value=96 Score=25.06 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=26.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 105 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~ 105 (202)
.++++|+|+++ -+...+++.|.+-|. +|.+ ..|.++++.+.
T Consensus 22 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~~ 62 (277)
T 2rhc_B 22 SEVALVTGATS--GIGLEIARRLGKEGL--RVFV--CARGEEGLRTT 62 (277)
T ss_dssp SCEEEEETCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHH
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHH
Confidence 57899999987 455667777777674 3333 34555554433
No 313
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=44.68 E-value=1.2e+02 Score=24.15 Aligned_cols=62 Identities=10% Similarity=0.007 Sum_probs=35.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHH------------------------HHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEA------------------------LSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l------------------------~~~~~~~~~~-- 112 (202)
+++++|+|+++- +...+++.|-+-|-.+.+. ...|.++++ .+++++..++
T Consensus 2 gk~~lVTGas~G--IG~aia~~l~~~g~~~~v~--~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 77 (254)
T 3kzv_A 2 GKVILVTGVSRG--IGKSIVDVLFSLDKDTVVY--GVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHG 77 (254)
T ss_dssp CCEEEECSTTSH--HHHHHHHHHHHHCSSCEEE--EEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCch--HHHHHHHHHHhcCCCeEEE--EecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 467888888874 4456666665555333332 233444444 3444433222
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 78 ~id~lvnnAg~~ 89 (254)
T 3kzv_A 78 KIDSLVANAGVL 89 (254)
T ss_dssp CCCEEEEECCCC
T ss_pred CccEEEECCccc
Confidence 578999988864
No 314
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=44.64 E-value=31 Score=24.47 Aligned_cols=44 Identities=11% Similarity=-0.097 Sum_probs=31.4
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.|-|.+ ++.=|.+.++++.|++.||+|+..= .-..|+...++.+
T Consensus 5 ~I~vYs--~~~Cp~C~~aK~~L~~~gi~y~~id--i~~d~~~~~~~~~ 48 (92)
T 2lqo_A 5 ALTIYT--TSWCGYCLRLKTALTANRIAYDEVD--IEHNRAAAEFVGS 48 (92)
T ss_dssp CEEEEE--CTTCSSHHHHHHHHHHTTCCCEEEE--TTTCHHHHHHHHH
T ss_pred cEEEEc--CCCCHhHHHHHHHHHhcCCceEEEE--cCCCHHHHHHHHH
Confidence 344444 5667899999999999999987543 3456776666543
No 315
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=44.53 E-value=1.1e+02 Score=24.47 Aligned_cols=62 Identities=16% Similarity=0.164 Sum_probs=42.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc--------------CCCchHHHHHHHHHhhc--CceEEEEecC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP--------------HQNCKEALSYALSAKER--GIKIIIVGDG 122 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa--------------HRtp~~l~~~~~~~~~~--g~~ViIa~AG 122 (202)
.++++|+|+++ -+...+++.|.+-|. ++.+++- -..++.+.+++++..++ +++++|-.||
T Consensus 8 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag 83 (264)
T 2dtx_A 8 DKVVIVTGASM--GIGRAIAERFVDEGS--KVIDLSIHDPGEAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAG 83 (264)
T ss_dssp TCEEEEESCSS--HHHHHHHHHHHHTTC--EEEEEESSCCCSCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEecCcccCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 47899999998 556778888887775 3433321 12355666666655432 5899999999
Q ss_pred Cc
Q 028883 123 VE 124 (202)
Q Consensus 123 ~a 124 (202)
..
T Consensus 84 ~~ 85 (264)
T 2dtx_A 84 IE 85 (264)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 316
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=44.40 E-value=95 Score=24.02 Aligned_cols=60 Identities=13% Similarity=0.170 Sum_probs=41.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC-----CCchHHHHHHHHHhhcCceEEEEecCCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH-----QNCKEALSYALSAKERGIKIIIVGDGVE 124 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH-----Rtp~~l~~~~~~~~~~g~~ViIa~AG~a 124 (202)
+++++|+|+++- +...+++.|.+-|. .+.+++-. ..++.+.++.+++ .+++++|-.||..
T Consensus 6 ~k~vlVTGas~g--IG~~~a~~l~~~G~--~V~~~~r~~~~D~~~~~~v~~~~~~~--g~id~lv~nAg~~ 70 (223)
T 3uce_A 6 KTVYVVLGGTSG--IGAELAKQLESEHT--IVHVASRQTGLDISDEKSVYHYFETI--GAFDHLIVTAGSY 70 (223)
T ss_dssp CEEEEEETTTSH--HHHHHHHHHCSTTE--EEEEESGGGTCCTTCHHHHHHHHHHH--CSEEEEEECCCCC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC--EEEEecCCcccCCCCHHHHHHHHHHh--CCCCEEEECCCCC
Confidence 689999999984 56677777766553 45444322 2356677777655 3489999999965
No 317
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=44.35 E-value=79 Score=24.16 Aligned_cols=87 Identities=9% Similarity=-0.106 Sum_probs=51.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHH-HHhCCCeEEEEEccCCC------------chHHHHHHHHHhhcCceEEEEecCC-c
Q 028883 59 PIVGIIMESDLDLPVMNDAARTL-SDFGVPYEIKILPPHQN------------CKEALSYALSAKERGIKIIIVGDGV-E 124 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L-~~~gi~~ev~V~SaHRt------------p~~l~~~~~~~~~~g~~ViIa~AG~-a 124 (202)
-+|.||.||..--..-++.++.+ +.+.-..++.+...... |+.+.++.+...+ ++.||.+.-. .
T Consensus 7 Mkilii~gS~r~~g~t~~la~~i~~~l~~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~--aD~ii~~sP~y~ 84 (193)
T 1rtt_A 7 IKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRA--ADALLFATPEYN 84 (193)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHH--CSEEEEECCEET
T ss_pred ceEEEEECCCCCCChHHHHHHHHHHhccCCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHh--CCEEEEEccccc
Confidence 37999999975323444444433 33542357777776653 3567777776655 6766666533 4
Q ss_pred Cchhhhh----h--------hccCCcEEEecCCCC
Q 028883 125 AHLSGVA----A--------ANSQILVIRVPLLSE 147 (202)
Q Consensus 125 a~Lpgvv----A--------~~T~~PVIgVP~~~~ 147 (202)
..+|+.+ - .+..+||.-+-+.++
T Consensus 85 ~~~p~~lK~~iD~~~~~~~~~l~gK~~~~~~t~gg 119 (193)
T 1rtt_A 85 YSMAGVLKNAIDWASRPPEQPFSGKPAAILGASAG 119 (193)
T ss_dssp TEECHHHHHHHHHHTCSSSCTTTTCEEEEEEECSS
T ss_pred cCcCHHHHHHHHHhccccCcccCCCeEEEEEeCCC
Confidence 4455543 1 245688877776644
No 318
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=44.19 E-value=51 Score=27.59 Aligned_cols=61 Identities=8% Similarity=0.082 Sum_probs=48.8
Q ss_pred HHHhCCCeEEEEE--ccC--CCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEe
Q 028883 81 LSDFGVPYEIKIL--PPH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 142 (202)
Q Consensus 81 L~~~gi~~ev~V~--SaH--Rtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgV 142 (202)
+++||+... .+. +.. =+|.++.++++..+++++++|+.=...+.-+.-.+|-.+..||+.+
T Consensus 188 ~~~yGl~~~-~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l 252 (284)
T 2prs_A 188 EKQFGLTPL-GHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMGTL 252 (284)
T ss_dssp HHHHTCCCC-EEEESSTTSCCCHHHHHHHHHHHHHTTCCEEEECTTSCSHHHHHHTTTSCCEEEEC
T ss_pred HHHCCCeEe-EeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHcCCeEEEe
Confidence 356888742 333 323 4678999999999999999999999999999999999999998765
No 319
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=44.18 E-value=99 Score=24.65 Aligned_cols=44 Identities=11% Similarity=0.216 Sum_probs=27.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALS 108 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~ 108 (202)
.++++|+|+++- +....++.|-+-|. ++.+ .-|.++++.+..++
T Consensus 29 ~k~vlITGas~g--IG~~la~~l~~~G~--~V~~--~~r~~~~~~~~~~~ 72 (262)
T 3rkr_A 29 GQVAVVTGASRG--IGAAIARKLGSLGA--RVVL--TARDVEKLRAVERE 72 (262)
T ss_dssp TCEEEESSTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHH
T ss_pred CCEEEEECCCCh--HHHHHHHHHHHCCC--EEEE--EECCHHHHHHHHHH
Confidence 579999999874 55666777767675 3333 34566655554443
No 320
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=44.06 E-value=89 Score=27.12 Aligned_cols=40 Identities=25% Similarity=0.476 Sum_probs=31.4
Q ss_pred hCCCeEEEEEccC-----CCchHHHHHHHHHhhcCceEEEEecCC
Q 028883 84 FGVPYEIKILPPH-----QNCKEALSYALSAKERGIKIIIVGDGV 123 (202)
Q Consensus 84 ~gi~~ev~V~SaH-----Rtp~~l~~~~~~~~~~g~~ViIa~AG~ 123 (202)
.+.+.-+|+..-. -+.+...++++.+++.|++.|-+..|+
T Consensus 208 v~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~ 252 (340)
T 3gr7_A 208 WDGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGA 252 (340)
T ss_dssp CCSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCC
T ss_pred cCCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 4788888887643 256788899999999999988877665
No 321
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=43.85 E-value=1.4e+02 Score=25.34 Aligned_cols=129 Identities=9% Similarity=-0.028 Sum_probs=67.6
Q ss_pred CCeEEEEecCCC-CHHHHHHHHHHHHHhCCCeEEEEEccCCC----ch--------HHHHHHHHHhhcCceEEEEecCCc
Q 028883 58 APIVGIIMESDL-DLPVMNDAARTLSDFGVPYEIKILPPHQN----CK--------EALSYALSAKERGIKIIIVGDGVE 124 (202)
Q Consensus 58 ~~~V~IimGS~S-D~~v~~~a~~~L~~~gi~~ev~V~SaHRt----p~--------~l~~~~~~~~~~g~~ViIa~AG~a 124 (202)
.+.|.|-+||.. .....+++.+.|+++++.+-+..-...+. ++ ...++. ..++++|.-+|..
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~~~~~~~v~~~~~~~~~~ll-----~~~d~~v~~gG~~ 295 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGRIDEGDDCLVVGEVNHQVLF-----GRVAAVVHHGGAG 295 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTEEEESSCCHHHHG-----GGSSEEEECCCHH
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccccccCCCCEEEecCCCHHHHH-----hhCcEEEECCcHH
Confidence 366777777776 56678888888888876533221111111 10 012232 1378999877752
Q ss_pred CchhhhhhhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecC-ChhhHHHHHHHHHccCCHHHHHHHHHHHh
Q 028883 125 AHLSGVAAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRN-NAKNAALYAVKVLGIADEDLLERIRKYVE 201 (202)
Q Consensus 125 a~LpgvvA~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~-n~~NAAl~Aa~IL~~~d~~l~~kl~~~~~ 201 (202)
.- .=|-..-+|+|.+|...... .. -..+.+ .|+ +.+ +. +..+...++..|..+-++++++++++..+
T Consensus 296 t~---~Eal~~GvP~v~~p~~~dQ~-~n-a~~~~~--~G~--g~~-l~~~~~~~~~l~~ai~~ll~~~~~~~~~~~~~ 363 (404)
T 3h4t_A 296 TT---TAVTRAGAPQVVVPQKADQP-YY-AGRVAD--LGV--GVA-HDGPTPTVESLSAALATALTPGIRARAAAVAG 363 (404)
T ss_dssp HH---HHHHHHTCCEEECCCSTTHH-HH-HHHHHH--HTS--EEE-CSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHT
T ss_pred HH---HHHHHcCCCEEEcCCcccHH-HH-HHHHHH--CCC--Eec-cCcCCCCHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 22 22234678999999843211 11 111222 344 323 33 22244445544444434788888776654
No 322
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=43.74 E-value=1e+02 Score=24.70 Aligned_cols=27 Identities=11% Similarity=0.052 Sum_probs=20.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP 87 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~ 87 (202)
.++++|+|+++- +....++.|-+-|..
T Consensus 26 ~k~vlITGas~g--IG~a~a~~l~~~G~~ 52 (272)
T 4e3z_A 26 TPVVLVTGGSRG--IGAAVCRLAARQGWR 52 (272)
T ss_dssp SCEEEETTTTSH--HHHHHHHHHHHTTCE
T ss_pred CCEEEEECCCch--HHHHHHHHHHHCCCE
Confidence 579999999984 566777777777753
No 323
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=43.61 E-value=1.1e+02 Score=24.67 Aligned_cols=42 Identities=17% Similarity=0.177 Sum_probs=26.2
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 105 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~ 105 (202)
..++++|+|+++ -+...+++.|-+-|. ++.+ ..|.++++.+.
T Consensus 20 ~~k~~lVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~~ 61 (267)
T 1vl8_A 20 RGRVALVTGGSR--GLGFGIAQGLAEAGC--SVVV--ASRNLEEASEA 61 (267)
T ss_dssp TTCEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHH
T ss_pred CCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHH
Confidence 367999999987 456667777776664 3333 33555544433
No 324
>1c2y_A Protein (lumazine synthase); riboflavin biosynthesis, transferase; HET: LMZ; 3.30A {Spinacia oleracea} SCOP: c.16.1.1
Probab=43.60 E-value=47 Score=26.57 Aligned_cols=117 Identities=17% Similarity=0.172 Sum_probs=72.7
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHHhCCC--e-EEEEEccCCCchHHHHHHHHHhhcCceEEEEec----CCcCch
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSDFGVP--Y-EIKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEAHL 127 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~~gi~--~-ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A----G~aa~L 127 (202)
..+++||.+.-.+. .-.+.|.+.|++.|+. + .++|-++.-.|--..++++ +..++.||+.. |..-|-
T Consensus 13 ~~ri~IV~arfn~~I~~~Ll~ga~~~l~~~Gv~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG~VIrG~T~Hf 89 (156)
T 1c2y_A 13 SFRFAIVVARFNEFVTRRLMEGALDTFKKYSVNEDIDVVWVPGAYELGVTAQALGK---SGKYHAIVCLGAVVKGDTSHY 89 (156)
T ss_dssp TCCEEEEEESTTHHHHHHHHHHHHHHHHHTTCCSCCEEEEESSHHHHHHHHHHHHH---TTCCSEEEEEEECCCCSSTHH
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEecccccCCchHH
Confidence 35799999999888 7788999999999985 2 3567777766666655544 34588888754 555443
Q ss_pred hhh----------hhhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 028883 128 SGV----------AAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 187 (202)
Q Consensus 128 pgv----------vA~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~ 187 (202)
==| ++-.+.+||+..=....+.. .-+ -+. | +=.-|.|..||..|.+++.+
T Consensus 90 d~Va~~v~~gl~~v~L~~~vPV~~GVLT~~~~e--QA~--~Ra--g----~~~~nKG~eaA~aAlem~~l 149 (156)
T 1c2y_A 90 DAVVNSASSGVLSAGLNSGVPCVFGVLTCDNMD--QAI--NRA--G----GKAGNKGAESALTAIEMASL 149 (156)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCEEEEEECCSSHH--HHH--HHE--E----ETTEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCHH--HHH--HHc--C----CcccchHHHHHHHHHHHHHH
Confidence 221 12236777775544332211 111 110 1 10125788899999988753
No 325
>2c92_A 6,7-dimethyl-8-ribityllumazine synthase; transferase, riboflavin biosynthesis, inhibitor binding; HET: TP6; 1.6A {Mycobacterium tuberculosis} PDB: 1w29_A* 1w19_A* 2c94_A* 2c97_A* 2c9b_A* 2c9d_A* 2vi5_A*
Probab=43.49 E-value=50 Score=26.54 Aligned_cols=117 Identities=13% Similarity=0.099 Sum_probs=73.2
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHHhCC-CeE-EEEEccCCCchHHHHHHHHHhhcCceEEEEec----CCcCchh
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSDFGV-PYE-IKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEAHLS 128 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~~gi-~~e-v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A----G~aa~Lp 128 (202)
..+++||.+.-.+. .-.+.|.+.|++.|+ .++ ++|-++.=.|--..++++ .++.||+.. |..-|-=
T Consensus 17 ~~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~~i~v~~VPGafEiP~aak~la~-----~yDavIaLG~VIrG~T~Hfd 91 (160)
T 2c92_A 17 GVRLAIVASSWHGKICDALLDGARKVAAGCGLDDPTVVRVLGAIEIPVVAQELAR-----NHDAVVALGVVIRGQTPHFD 91 (160)
T ss_dssp TCCEEEEEECSSHHHHHHHHHHHHHHHHHTTCSCCEEEEESSGGGHHHHHHHHHT-----SCSEEEEEEEEECCSSTHHH
T ss_pred CCEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCceEEEECCcHHHHHHHHHHHHh-----cCCEEEEEeeeecCCchHHH
Confidence 36899999999988 788899999999998 443 578888877776666653 388888743 5554432
Q ss_pred hh----------hhhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 028883 129 GV----------AAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 187 (202)
Q Consensus 129 gv----------vA~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~ 187 (202)
=| ++-.+.+||+..=....+. + -+.-. .|.+- -..|.|..||..|.+++.+
T Consensus 92 ~Va~~vs~Gl~~v~L~~~vPV~~GVLT~~~~---e-QA~~R--ag~~~--~~~nKG~eaA~aalem~~l 152 (160)
T 2c92_A 92 YVCDAVTQGLTRVSLDSSTPIANGVLTTNTE---E-QALDR--AGLPT--SAEDKGAQATVAALATALT 152 (160)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEEEEEESSH---H-HHHTT--BTCTT--CSCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCEEEEEcCCCCH---H-HHHHH--hcccc--ccchhHHHHHHHHHHHHHH
Confidence 21 1224677877652222111 1 00001 12110 1136789999999998764
No 326
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=43.39 E-value=1e+02 Score=24.96 Aligned_cols=62 Identities=16% Similarity=0.134 Sum_probs=40.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-------------------CCCchHHHHHHHHHhhc--CceEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-------------------HQNCKEALSYALSAKER--GIKII 117 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa-------------------HRtp~~l~~~~~~~~~~--g~~Vi 117 (202)
.++++|+|+++ -+...+++.|-+-|.. +.+++- -..++.+.+++++..++ +++++
T Consensus 16 ~k~vlVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 91 (266)
T 3p19_A 16 KKLVVITGASS--GIGEAIARRFSEEGHP--LLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAI 91 (266)
T ss_dssp CCEEEEESTTS--HHHHHHHHHHHHTTCC--EEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCCE--EEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 57999999998 4567788888887864 322211 12344555555555433 57999
Q ss_pred EEecCCc
Q 028883 118 IVGDGVE 124 (202)
Q Consensus 118 Ia~AG~a 124 (202)
|-.||..
T Consensus 92 vnnAg~~ 98 (266)
T 3p19_A 92 VNNAGMM 98 (266)
T ss_dssp EECCCCC
T ss_pred EECCCcC
Confidence 9999964
No 327
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=43.26 E-value=98 Score=24.08 Aligned_cols=87 Identities=10% Similarity=0.022 Sum_probs=48.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHH-HHHhCCCeEEEEEccCCC-----------chHHHHHHHHHhhcCceEEEEec-----
Q 028883 59 PIVGIIMESDLDLPVMNDAART-LSDFGVPYEIKILPPHQN-----------CKEALSYALSAKERGIKIIIVGD----- 121 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~-L~~~gi~~ev~V~SaHRt-----------p~~l~~~~~~~~~~g~~ViIa~A----- 121 (202)
.+|.||.||...-..-++.++. ++.+.-..++.+...... |+.+.++.+...+ ++.||.++
T Consensus 3 ~kilii~gS~r~~s~t~~la~~~~~~~~~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~--AD~iV~~sP~y~~ 80 (192)
T 3fvw_A 3 KRILFIVGSFSEGSFNRQLAKKAETIIGDRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQE--ADAIWIFSPVYNY 80 (192)
T ss_dssp CEEEEEESCCSTTCHHHHHHHHHHHHHTTSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHH--CSEEEEECCCBTT
T ss_pred CEEEEEEcCCCCCCHHHHHHHHHHHhcCCCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHh--CCEEEEECccccc
Confidence 4799999998643333332222 233332346666665433 4567777777766 67666654
Q ss_pred CCcCchhhhhh---------------hccCCcEEEecCCCC
Q 028883 122 GVEAHLSGVAA---------------ANSQILVIRVPLLSE 147 (202)
Q Consensus 122 G~aa~LpgvvA---------------~~T~~PVIgVP~~~~ 147 (202)
+..+.|=..+- .+..+||.-+-+.++
T Consensus 81 ~~p~~lK~~iD~~~~~~~~~~~~g~~~l~gK~~~i~~t~gg 121 (192)
T 3fvw_A 81 AIPGPVKNLLDWLSRSLDLSDPTGPSVLQDKIVTVSSVANG 121 (192)
T ss_dssp BCCHHHHHHHHHHTSCSCSSCTTSCCTTTTCEEEEEEESCC
T ss_pred CCCHHHHHHHHHhhccccccCCCCCccCCCCEEEEEEeCCC
Confidence 33333332221 256678876666554
No 328
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=43.22 E-value=1.2e+02 Score=24.06 Aligned_cols=26 Identities=15% Similarity=0.056 Sum_probs=20.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+++ -+...+++.|-+-|.
T Consensus 10 gk~vlVTGas~--gIG~~ia~~l~~~G~ 35 (287)
T 3pxx_A 10 DKVVLVTGGAR--GQGRSHAVKLAEEGA 35 (287)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCC
Confidence 67999999998 456677777777775
No 329
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=43.14 E-value=46 Score=26.66 Aligned_cols=70 Identities=16% Similarity=0.151 Sum_probs=44.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQIL 138 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~P 138 (202)
.+|+||.=.. - ..++..+.+-||++.+.... .+++++++.++++.++|+++||+. .+.-=+|-.-.+|
T Consensus 95 ~kIavvg~~~-~---~~~~~~~~~ll~~~i~~~~~---~~~~e~~~~i~~l~~~G~~vvVG~-----~~~~~~A~~~Gl~ 162 (196)
T 2q5c_A 95 NELALIAYKH-S---IVDKHEIEAMLGVKIKEFLF---SSEDEITTLISKVKTENIKIVVSG-----KTVTDEAIKQGLY 162 (196)
T ss_dssp SEEEEEEESS-C---SSCHHHHHHHHTCEEEEEEE---CSGGGHHHHHHHHHHTTCCEEEEC-----HHHHHHHHHTTCE
T ss_pred CcEEEEeCcc-h---hhHHHHHHHHhCCceEEEEe---CCHHHHHHHHHHHHHCCCeEEECC-----HHHHHHHHHcCCc
Confidence 4788774432 2 33445555668886554433 678999999999999999998873 2333444555555
Q ss_pred EE
Q 028883 139 VI 140 (202)
Q Consensus 139 VI 140 (202)
.+
T Consensus 163 ~v 164 (196)
T 2q5c_A 163 GE 164 (196)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 330
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=43.10 E-value=89 Score=24.90 Aligned_cols=65 Identities=8% Similarity=-0.006 Sum_probs=39.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC------------------------CCchHHHHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH------------------------QNCKEALSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH------------------------Rtp~~l~~~~~~~~~~-- 112 (202)
.++++|+|+++.--+...+++.|.+-|. +|.+++-. ..++.+.+++++..++
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGA--ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCC--EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4688999988444566777777777774 34433211 1223344444444332
Q ss_pred CceEEEEecCCcC
Q 028883 113 GIKIIIVGDGVEA 125 (202)
Q Consensus 113 g~~ViIa~AG~aa 125 (202)
+++++|-.||...
T Consensus 87 ~iD~lv~~Ag~~~ 99 (265)
T 1qsg_A 87 KFDGFVHSIGFAP 99 (265)
T ss_dssp SEEEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 5799999999653
No 331
>2i0f_A 6,7-dimethyl-8-ribityllumazine synthase 1; lumazine synthase RIBH1, transferase; 2.22A {Brucella abortus} PDB: 2f59_A 2o6h_A*
Probab=42.75 E-value=59 Score=26.00 Aligned_cols=62 Identities=13% Similarity=0.082 Sum_probs=47.6
Q ss_pred CeEEEEecCCCCH---HHHHHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHHh--hcCceEEEEe
Q 028883 59 PIVGIIMESDLDL---PVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAK--ERGIKIIIVG 120 (202)
Q Consensus 59 ~~V~IimGS~SD~---~v~~~a~~~L~~~gi~~e-v~V~SaHRtp~~l~~~~~~~~--~~g~~ViIa~ 120 (202)
.+++||.+.-.+. .-.+.|.+.|++.|.+++ ++|-++.=.|--..+++++.. ...++.||+.
T Consensus 13 ~ri~IV~arfn~~I~~~Ll~gA~~~l~~~G~~i~v~~VPGafEiP~aa~~la~~~~~~~~~yDavIaL 80 (157)
T 2i0f_A 13 PHLLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVAL 80 (157)
T ss_dssp CEEEEEEECSSHHHHHHHHHHHHHHHHHTTCEEEEEEESSGGGHHHHHHHHHHHHHTTCCCCSEEEEE
T ss_pred cEEEEEEEeCcHHHHHHHHHHHHHHHHHcCCCeEEEECCcHHHHHHHHHHHHhhccccCCCCCEEEEe
Confidence 5899999999888 778899999999996555 478888888877777765321 1347888874
No 332
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=42.75 E-value=1.2e+02 Score=23.84 Aligned_cols=84 Identities=14% Similarity=0.120 Sum_probs=42.7
Q ss_pred CCeEEEEecCCCCHH-HHHHHHHHHHHhCCCeEEEEEcc---CCCchHH----------HHHHHHHhhcCceEEEEecCC
Q 028883 58 APIVGIIMESDLDLP-VMNDAARTLSDFGVPYEIKILPP---HQNCKEA----------LSYALSAKERGIKIIIVGDGV 123 (202)
Q Consensus 58 ~~~V~IimGS~SD~~-v~~~a~~~L~~~gi~~ev~V~Sa---HRtp~~l----------~~~~~~~~~~g~~ViIa~AG~ 123 (202)
+.++|+|.=|+||.. ..+.....+.+..=..++..... .++.+.. .+.++.+++.|+++|+..--.
T Consensus 6 ~~~ig~i~p~~~~~~~e~~~~~~~~~~~~p~~~i~~~~~p~g~~~~~~~~~~~~~~~~l~~~~~~l~~~g~d~iviaCnt 85 (228)
T 2eq5_A 6 KYTIGLIRVITLEDKEILNLHGRIIESAFPELKVVSRCIEDQPKGIYNEETEREAEPKIIRLAKEFEREGVDAIIISCAA 85 (228)
T ss_dssp CEEEEEEESSCCCCHHHHTHHHHHHHHHCTTEEEEEEECSSCTTCCSSHHHHHHHHHHHHHHHHHHHHTTCSEEEECSTT
T ss_pred ceEEEEEeccCccCHHHHHHHHHHHHhhCCCCeEEEEeCCCCchhccccccHHHhHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 357999999996543 33333343444332233322221 2233222 233445567788755444333
Q ss_pred cCchhhhhhhccCCcEEEe
Q 028883 124 EAHLSGVAAANSQILVIRV 142 (202)
Q Consensus 124 aa~LpgvvA~~T~~PVIgV 142 (202)
+..+. -+...+..||||+
T Consensus 86 a~~~~-~l~~~~~iPvi~i 103 (228)
T 2eq5_A 86 DPAVE-KVRKLLSIPVIGA 103 (228)
T ss_dssp CTTHH-HHHHHCSSCEEEH
T ss_pred hHHHH-HHHHhCCCCEeCc
Confidence 33333 3445678999984
No 333
>1ntc_A Protein (nitrogen regulation protein (NTRC)); helix-turn-helix, FIS, four-helix bundle, transcription regulation; NMR {Salmonella typhimurium} SCOP: a.4.1.12
Probab=42.67 E-value=15 Score=25.97 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=19.4
Q ss_pred HHHHHHccCCHHHHHHHHHHHh
Q 028883 180 YAVKVLGIADEDLLERIRKYVE 201 (202)
Q Consensus 180 ~Aa~IL~~~d~~l~~kl~~~~~ 201 (202)
-||+.|++....|+.||++|.-
T Consensus 69 ~aA~~LGIsr~tL~rklkk~~i 90 (91)
T 1ntc_A 69 EAARLLGWGAATLTAKLKELGM 90 (91)
T ss_dssp HHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHHHhCc
Confidence 4688999999999999999864
No 334
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=42.57 E-value=1.1e+02 Score=25.39 Aligned_cols=26 Identities=19% Similarity=0.072 Sum_probs=19.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+++- +...+++.|-+-|.
T Consensus 46 gk~~lVTGas~G--IG~aia~~la~~G~ 71 (317)
T 3oec_A 46 GKVAFITGAARG--QGRTHAVRLAQDGA 71 (317)
T ss_dssp TCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 679999999984 45667777777775
No 335
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=42.53 E-value=44 Score=27.41 Aligned_cols=44 Identities=14% Similarity=0.028 Sum_probs=27.8
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.+++++|+|+++ -+...+++.|-+-|. +| +-..|.++++.+..+
T Consensus 32 ~gk~~lVTGas~--GIG~aia~~la~~G~--~V--~~~~r~~~~~~~~~~ 75 (281)
T 4dry_A 32 EGRIALVTGGGT--GVGRGIAQALSAEGY--SV--VITGRRPDVLDAAAG 75 (281)
T ss_dssp --CEEEETTTTS--HHHHHHHHHHHHTTC--EE--EEEESCHHHHHHHHH
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCC--EE--EEEECCHHHHHHHHH
Confidence 368999999998 456677777777775 33 333456555554443
No 336
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=42.50 E-value=1.3e+02 Score=24.01 Aligned_cols=83 Identities=14% Similarity=0.125 Sum_probs=48.9
Q ss_pred eEEEEecCCCC----HHHHHHHHHHHHHh-CCCeEEEEEccCCC--------------------c--hHHHHHHHHHhhc
Q 028883 60 IVGIIMESDLD----LPVMNDAARTLSDF-GVPYEIKILPPHQN--------------------C--KEALSYALSAKER 112 (202)
Q Consensus 60 ~V~IimGS~SD----~~v~~~a~~~L~~~-gi~~ev~V~SaHRt--------------------p--~~l~~~~~~~~~~ 112 (202)
+|.||.||... ...++.+.+.|++- |++ +.+...... + +.+.++.++..+
T Consensus 3 kIliI~gS~r~~s~T~~la~~i~~~l~~~~g~~--v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~- 79 (242)
T 1sqs_A 3 KIFIYAGVRNHNSKTLEYTKRLSSIISSRNNVD--ISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLE- 79 (242)
T ss_dssp EEEEEECCCCTTCHHHHHHHHHHHHHHHHSCCE--EEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHH-
T ss_pred eEEEEECCCCCCChHHHHHHHHHHHHHHhcCCe--EEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHHH-
Confidence 79999999753 44566667777666 764 455544432 1 556667666655
Q ss_pred CceEEEEec-----CCcCchhhhhh---------hccCCcEEEecCCC
Q 028883 113 GIKIIIVGD-----GVEAHLSGVAA---------ANSQILVIRVPLLS 146 (202)
Q Consensus 113 g~~ViIa~A-----G~aa~LpgvvA---------~~T~~PVIgVP~~~ 146 (202)
+++||.++ ++.+.|=..+- .+..+|++-+-+.+
T Consensus 80 -AD~iI~~sP~y~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g 126 (242)
T 1sqs_A 80 -SDIIIISSPVYLQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAE 126 (242)
T ss_dssp -CSEEEEEEEECSSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEES
T ss_pred -CCEEEEEccccccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCC
Confidence 67666655 33444444333 23457777665544
No 337
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=42.42 E-value=98 Score=24.39 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=24.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 105 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~ 105 (202)
.++.+|+|+++- +....++.|-+-|. ++.+ ..|.++++.+.
T Consensus 14 ~k~vlITGasgg--iG~~la~~l~~~G~--~V~~--~~r~~~~~~~~ 54 (266)
T 1xq1_A 14 AKTVLVTGGTKG--IGHAIVEEFAGFGA--VIHT--CARNEYELNEC 54 (266)
T ss_dssp TCEEEETTTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHH
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC--EEEE--EeCCHHHHHHH
Confidence 468889998874 55666666666664 3333 34555554443
No 338
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=42.34 E-value=80 Score=25.34 Aligned_cols=43 Identities=12% Similarity=0.064 Sum_probs=26.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
+++++|+|+.+- +...+++.|-+-|. ++.+ ..|.++++.+..+
T Consensus 10 ~k~~lVTGas~g--IG~aia~~l~~~G~--~V~~--~~r~~~~~~~~~~ 52 (267)
T 3t4x_A 10 GKTALVTGSTAG--IGKAIATSLVAEGA--NVLI--NGRREENVNETIK 52 (267)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC--EEEE--EESSHHHHHHHHH
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHH
Confidence 578999999874 45566666666664 3332 3455555544433
No 339
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=42.31 E-value=80 Score=27.63 Aligned_cols=87 Identities=14% Similarity=0.045 Sum_probs=54.7
Q ss_pred cCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhh--h-ccCCcEEEe
Q 028883 66 ESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAA--A-NSQILVIRV 142 (202)
Q Consensus 66 GS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA--~-~T~~PVIgV 142 (202)
+...|....+...+++++.||||.. +.+ .|+ +=++.+. . -.+...|++
T Consensus 263 ~~~~~~~l~~~l~~~a~~~gIp~q~-~~~--------------------------ggG--tDa~~i~~a~~Gipt~~igv 313 (355)
T 3kl9_A 263 GHLLLPGMKDFLLTTAEEAGIKYQY-YCG--------------------------KGG--TDAGAAHLKNGGVPSTTIGV 313 (355)
T ss_dssp TEECCHHHHHHHHHHHHHTTCCEEE-EEC--------------------------SSC--CTHHHHTTSTTCCCEEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEE-ECC--------------------------Ccc--hHHHHHHHhCCCCCEEEEcc
Confidence 5566777777777777777777765 431 122 2223332 1 256667888
Q ss_pred cCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHccCCHHHHHHH
Q 028883 143 PLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGIADEDLLERI 196 (202)
Q Consensus 143 P~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~~d~~l~~kl 196 (202)
|..... .|.-++.++.-.++.-+...++...+++-.+++
T Consensus 314 p~~~~H---------------s~~E~~~~~Di~~~~~ll~~~l~~l~~~~~~~~ 352 (355)
T 3kl9_A 314 CARYIH---------------SHQTLYAMDDFLEAQAFLQALVKKLDRSTVDLI 352 (355)
T ss_dssp EEBSCS---------------SSCEEEEHHHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred CcCCCC---------------CcceEeeHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 886532 244667778888888877777777666655544
No 340
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=42.29 E-value=1.2e+02 Score=24.00 Aligned_cols=62 Identities=8% Similarity=0.113 Sum_probs=41.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC--------------CCchHHHHHHHHHhh--cCceEEEEecC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------QNCKEALSYALSAKE--RGIKIIIVGDG 122 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH--------------Rtp~~l~~~~~~~~~--~g~~ViIa~AG 122 (202)
.++++|+|+++ -+...+++.|.+-|. ++.+.+-. ..++.+.+++++..+ .+++++|-.||
T Consensus 15 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag 90 (247)
T 1uzm_A 15 SRSVLVTGGNR--GIGLAIAQRLAADGH--KVAVTHRGSGAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAG 90 (247)
T ss_dssp CCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECS
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCChHHHHHhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 57899999998 567788888888885 44443211 224556666665533 25799999999
Q ss_pred Cc
Q 028883 123 VE 124 (202)
Q Consensus 123 ~a 124 (202)
..
T Consensus 91 ~~ 92 (247)
T 1uzm_A 91 LS 92 (247)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 341
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=42.24 E-value=1.1e+02 Score=24.66 Aligned_cols=28 Identities=18% Similarity=0.153 Sum_probs=20.1
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVP 87 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~ 87 (202)
..++++|+|+++ -+...+++.|-+-|..
T Consensus 26 ~~k~~lVTGas~--GIG~aia~~la~~G~~ 53 (267)
T 3u5t_A 26 TNKVAIVTGASR--GIGAAIAARLASDGFT 53 (267)
T ss_dssp -CCEEEEESCSS--HHHHHHHHHHHHHTCE
T ss_pred CCCEEEEeCCCC--HHHHHHHHHHHHCCCE
Confidence 368999999998 4556677777766753
No 342
>4hoj_A REGF protein; GST, glutathione S-transferase, enzyme function initiative, structural genomics, transferase; HET: GSH; 1.40A {Neisseria gonorrhoeae}
Probab=42.19 E-value=34 Score=26.18 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHH
Q 028883 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEA 102 (202)
Q Consensus 72 ~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l 102 (202)
|.++++.-.|++.|++||..-+.....++..
T Consensus 13 P~~~rvr~~L~e~gi~~e~~~v~~~~~~~~~ 43 (210)
T 4hoj_A 13 PFSHRCRFVLYEKGMDFEIKDIDIYNKPEDL 43 (210)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTSCCHHH
T ss_pred hHHHHHHHHHHHcCCCCEEEEeCCCCCCHHH
Confidence 8899999999999999998877766556544
No 343
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=42.13 E-value=67 Score=27.23 Aligned_cols=58 Identities=14% Similarity=0.044 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEcc------CC-CchHHHHHHHHHhhcCceEEEEe--cCCcCchhhhh
Q 028883 72 PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKIIIVG--DGVEAHLSGVA 131 (202)
Q Consensus 72 ~v~~~a~~~L~~~gi~~ev~V~Sa------HR-tp~~l~~~~~~~~~~g~~ViIa~--AG~aa~Lpgvv 131 (202)
+.++++.+.+++.|+.++..+.-. .| .|+.+.++++.+.+-|++.|-.+ .|. ..|.-+
T Consensus 124 ~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~--~~P~~~ 190 (302)
T 2ftp_A 124 ERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGV--GTAGAT 190 (302)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEEEEEESSSC--CCHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCC--cCHHHH
Confidence 557788888889999887766553 23 57999999999888898755444 343 456554
No 344
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=42.00 E-value=87 Score=24.71 Aligned_cols=54 Identities=11% Similarity=0.012 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecC
Q 028883 69 LDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDG 122 (202)
Q Consensus 69 SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG 122 (202)
.|-...++.++.|++.|+.+...-....+..+.+.+.++.++.-|++.++...|
T Consensus 60 ~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~ 113 (262)
T 3p6l_A 60 LDAQTQKEIKELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPA 113 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCHHHHHHHHHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCC
Confidence 345567778888888888654433344456677777777777777777777655
No 345
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=41.94 E-value=76 Score=25.89 Aligned_cols=86 Identities=10% Similarity=0.015 Sum_probs=56.3
Q ss_pred CCCeEEEEecCCCC-----HHHHHHHHHHHHHhC-----CCeEEEEEccCCCchHHHHHHHHHhhc-CceEEEEecCCcC
Q 028883 57 DAPIVGIIMESDLD-----LPVMNDAARTLSDFG-----VPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEA 125 (202)
Q Consensus 57 ~~~~V~IimGS~SD-----~~v~~~a~~~L~~~g-----i~~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViIa~AG~aa 125 (202)
+.-+||++.--+.. .+..+.+...+++.| .++++.+..-...|++..+.++++..+ +.+.||...+...
T Consensus 15 ~~i~IG~~~p~sg~~~~~~~~~~~g~~~a~~~~ng~~~g~~~~l~~~d~~~~~~~~~~~~~~l~~~~~v~~iig~~~s~~ 94 (375)
T 4evq_A 15 GALKVGLLLPYSGTYAPLGEAITRGLELYVQSQGGKLGGRSISFVKVDDESAPPKATELTTKLIQSEKADVLIGTVHSGV 94 (375)
T ss_dssp CCEEEEEEECSSSTTHHHHHHHHHHHHHHHHHTTTEETTEEEEEEEEECTTCHHHHHHHHHCCCCCSCCSEEEECSSHHH
T ss_pred CCeEEEEEeCCCCcchhcCHHHHHHHHHHHHHhCCCcCCEEEEEEEecCCCCHHHHHHHHHHHHhcCCceEEEcCCccHH
Confidence 33578888754432 234445555667764 458888888999999999988888664 7888887654433
Q ss_pred chhh-hhhhccCCcEEEe
Q 028883 126 HLSG-VAAANSQILVIRV 142 (202)
Q Consensus 126 ~Lpg-vvA~~T~~PVIgV 142 (202)
..+- -++....+|+|..
T Consensus 95 ~~~~~~~~~~~~iP~v~~ 112 (375)
T 4evq_A 95 AMAMVKIAREDGIPTIVP 112 (375)
T ss_dssp HHHHHHHHHHHCCCEEES
T ss_pred HHHHHHHHHHcCceEEec
Confidence 3222 1234567899864
No 346
>1umq_A Photosynthetic apparatus regulatory protein; DNA-binding protein, response regulator, DNA binding domain, helix-turn-helix; NMR {Rhodobacter sphaeroides} SCOP: a.4.1.12
Probab=41.93 E-value=8.4 Score=27.56 Aligned_cols=21 Identities=14% Similarity=0.127 Sum_probs=18.7
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 028883 180 YAVKVLGIADEDLLERIRKYV 200 (202)
Q Consensus 180 ~Aa~IL~~~d~~l~~kl~~~~ 200 (202)
-||++|++....|+.||++|.
T Consensus 59 ~AA~~LGISR~TLyrKLkk~g 79 (81)
T 1umq_A 59 ETARRLNMHRRTLQRILAKRS 79 (81)
T ss_dssp HHHHHHTSCHHHHHHHHHTSS
T ss_pred HHHHHhCCCHHHHHHHHHHhC
Confidence 478999999999999999874
No 347
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=41.73 E-value=1.1e+02 Score=23.01 Aligned_cols=79 Identities=14% Similarity=0.143 Sum_probs=49.4
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeE--------------------EEEEccCCCchHHHHHHHHHhhcCceEEEE
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKERGIKIIIV 119 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~e--------------------v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa 119 (202)
+|-|+ |.-+=...++.....|..+|.++. +-+.|..+...++.+.++.++++|+++|..
T Consensus 51 ~I~i~-G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~I 129 (183)
T 2xhz_A 51 KVVVM-GMGASGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129 (183)
T ss_dssp CEEEE-ECHHHHHHHHHHHHHHHTTTCCEEECCTTHHHHHTSTTCCTTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEE
T ss_pred eEEEE-eecHHHHHHHHHHHHHHhcCceEEEeCchHHhhhhhccCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEE
Confidence 45444 444445788888888888888642 456777777778888888888888765443
Q ss_pred ecCCcCchhhhhhhccCCcEEEecC
Q 028883 120 GDGVEAHLSGVAAANSQILVIRVPL 144 (202)
Q Consensus 120 ~AG~aa~LpgvvA~~T~~PVIgVP~ 144 (202)
-....+-| +...+. +|-+|.
T Consensus 130 T~~~~s~l----a~~ad~-~l~~~~ 149 (183)
T 2xhz_A 130 TGRPESSM----ARAADV-HLCVKV 149 (183)
T ss_dssp ESCTTSHH----HHHSSE-EEECCC
T ss_pred ECCCCChh----HHhCCE-EEEeCC
Confidence 33333333 333443 455554
No 348
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=41.66 E-value=93 Score=26.58 Aligned_cols=75 Identities=11% Similarity=0.058 Sum_probs=39.0
Q ss_pred CCeEEEEecCCCC-H--HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh-
Q 028883 58 APIVGIIMESDLD-L--PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA- 133 (202)
Q Consensus 58 ~~~V~IimGS~SD-~--~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~- 133 (202)
...|+|++- .++ + .+.+.+.+.+++.|..+.+.. ..... ++++.+..++++-||... .-+..+.-
T Consensus 25 s~~Igvv~~-~~~~f~~~l~~gi~~~a~~~g~~~~i~~--~~~~~----~~i~~l~~~~vDGiIi~~----~~~~~~~~l 93 (412)
T 4fe7_A 25 RHRITLLFN-ANKAYDRQVVEGVGEYLQASQSEWDIFI--EEDFR----ARIDKIKDWLGDGVIADF----DDKQIEQAL 93 (412)
T ss_dssp CEEEEEECC-TTSHHHHHHHHHHHHHHHHHTCCEEEEE--CC-CC------------CCCSEEEEET----TCHHHHHHH
T ss_pred CceEEEEeC-CcchhhHHHHHHHHHHHHhcCCCeEEEe--cCCcc----chhhhHhcCCCCEEEEec----CChHHHHHH
Confidence 367999994 333 2 456677788888997655543 33322 234445557788777622 12223322
Q ss_pred -ccCCcEEEec
Q 028883 134 -NSQILVIRVP 143 (202)
Q Consensus 134 -~T~~PVIgVP 143 (202)
....|||-+=
T Consensus 94 ~~~~iPvV~i~ 104 (412)
T 4fe7_A 94 ADVDVPIVGVG 104 (412)
T ss_dssp TTCCSCEEEEE
T ss_pred hhCCCCEEEec
Confidence 3467887653
No 349
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=41.63 E-value=1.4e+02 Score=24.12 Aligned_cols=66 Identities=15% Similarity=0.195 Sum_probs=45.1
Q ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc---------------cCCCchHHHHHHHHHhhc--CceEE
Q 028883 55 STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---------------PHQNCKEALSYALSAKER--GIKII 117 (202)
Q Consensus 55 ~~~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S---------------aHRtp~~l~~~~~~~~~~--g~~Vi 117 (202)
....+++++|+|+.+ -+...+++.|-+-|.. +.+++ =-..++.+.+++++..++ +++++
T Consensus 10 ~~~~~k~vlVTGas~--GIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 85 (269)
T 3vtz_A 10 EEFTDKVAIVTGGSS--GIGLAVVDALVRYGAK--VVSVSLDEKSDVNVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL 85 (269)
T ss_dssp CTTTTCEEEESSTTS--HHHHHHHHHHHHTTCE--EEEEESCC--CTTSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred cCCCCCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCCchhccCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 344578999999998 5667788888887864 33322 123456667776665443 57999
Q ss_pred EEecCCc
Q 028883 118 IVGDGVE 124 (202)
Q Consensus 118 Ia~AG~a 124 (202)
|-.||..
T Consensus 86 v~nAg~~ 92 (269)
T 3vtz_A 86 VNNAGIE 92 (269)
T ss_dssp EECCCCC
T ss_pred EECCCcC
Confidence 9999974
No 350
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=41.47 E-value=1e+02 Score=24.76 Aligned_cols=62 Identities=16% Similarity=0.081 Sum_probs=42.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc----------------CCCchHHHHHHHHHhhc--CceEEEEe
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP----------------HQNCKEALSYALSAKER--GIKIIIVG 120 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa----------------HRtp~~l~~~~~~~~~~--g~~ViIa~ 120 (202)
.++++|+|+++ -+...+++.|-+-|.. +.+++- -..++.+.+++++..++ +++++|-.
T Consensus 28 ~k~vlVTGas~--gIG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n 103 (260)
T 3un1_A 28 QKVVVITGASQ--GIGAGLVRAYRDRNYR--VVATSRSIKPSADPDIHTVAGDISKPETADRIVREGIERFGRIDSLVNN 103 (260)
T ss_dssp CCEEEESSCSS--HHHHHHHHHHHHTTCE--EEEEESSCCCCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCChhhcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence 57999999998 4566778888777863 333321 13456677776665443 68999999
Q ss_pred cCCc
Q 028883 121 DGVE 124 (202)
Q Consensus 121 AG~a 124 (202)
||..
T Consensus 104 Ag~~ 107 (260)
T 3un1_A 104 AGVF 107 (260)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9964
No 351
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=41.33 E-value=56 Score=28.38 Aligned_cols=70 Identities=9% Similarity=-0.053 Sum_probs=48.8
Q ss_pred EEEecCCCCH--------------HHHHHHHHHHHHhCCCeEEEEEc---cCCC-chHHHHHHHHHhhcCceEEEEecCC
Q 028883 62 GIIMESDLDL--------------PVMNDAARTLSDFGVPYEIKILP---PHQN-CKEALSYALSAKERGIKIIIVGDGV 123 (202)
Q Consensus 62 ~IimGS~SD~--------------~v~~~a~~~L~~~gi~~ev~V~S---aHRt-p~~l~~~~~~~~~~g~~ViIa~AG~ 123 (202)
.-+..+.||. +.++++.+.+++.|..+.+.+.. ..|. |+.+.++++.+.+-|++.|-.+-=.
T Consensus 113 v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~ 192 (337)
T 3ble_A 113 LNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTL 192 (337)
T ss_dssp EEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEEEECTT
T ss_pred EEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEEEecCC
Confidence 3456678886 67778888888999987777665 5554 7889999999999898765554333
Q ss_pred cCchhhhh
Q 028883 124 EAHLSGVA 131 (202)
Q Consensus 124 aa~Lpgvv 131 (202)
-...|.-+
T Consensus 193 G~~~P~~v 200 (337)
T 3ble_A 193 GVLSPEET 200 (337)
T ss_dssp CCCCHHHH
T ss_pred CCcCHHHH
Confidence 33345443
No 352
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=41.29 E-value=1.3e+02 Score=24.02 Aligned_cols=45 Identities=9% Similarity=-0.024 Sum_probs=28.0
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHH
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALS 108 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~ 108 (202)
..++++|+|+++- +....++.|.+.|. ++.+ ..|.++++.+..++
T Consensus 30 ~~k~vlITGasgg--IG~~la~~L~~~G~--~V~~--~~r~~~~~~~~~~~ 74 (272)
T 1yb1_A 30 TGEIVLITGAGHG--IGRLTAYEFAKLKS--KLVL--WDINKHGLEETAAK 74 (272)
T ss_dssp TTCEEEEETTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHH
T ss_pred CCCEEEEECCCch--HHHHHHHHHHHCCC--EEEE--EEcCHHHHHHHHHH
Confidence 3578999999874 56677777777774 3333 34555555544433
No 353
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=41.23 E-value=1e+02 Score=25.10 Aligned_cols=60 Identities=13% Similarity=0.171 Sum_probs=37.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHH------------------------HHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEA------------------------LSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l------------------------~~~~~~~~~~-- 112 (202)
.++++|+|+++- +...+++.|-+-|. .+.++ .|.++++ .+++++..++
T Consensus 27 ~k~vlVTGas~G--IG~aia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 27 QRVCIVTGGGSG--IGRATAELFAKNGA--YVVVA--DVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC--EEEEE--ESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 689999999984 56677777777775 33332 3444443 3444433322
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 101 ~iD~lv~nAg~~ 112 (277)
T 4dqx_A 101 RVDVLVNNAGFG 112 (277)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 578899888853
No 354
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=41.15 E-value=1.2e+02 Score=24.04 Aligned_cols=62 Identities=18% Similarity=0.123 Sum_probs=39.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC----------------------CCchHHHHHHHHHhhc--Cc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH----------------------QNCKEALSYALSAKER--GI 114 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH----------------------Rtp~~l~~~~~~~~~~--g~ 114 (202)
+++++|+|+++- +...+++.|-+-|.. +.+++-. ..++.+.+++++..++ ++
T Consensus 7 ~k~~lVTGas~g--IG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (257)
T 3tpc_A 7 SRVFIVTGASSG--LGAAVTRMLAQEGAT--VLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHV 82 (257)
T ss_dssp TCEEEEESTTSH--HHHHHHHHHHHTTCE--EEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCH--HHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 579999999984 566777888777753 3332211 2234455555544332 57
Q ss_pred eEEEEecCCc
Q 028883 115 KIIIVGDGVE 124 (202)
Q Consensus 115 ~ViIa~AG~a 124 (202)
+++|-.||..
T Consensus 83 d~lv~nAg~~ 92 (257)
T 3tpc_A 83 HGLVNCAGTA 92 (257)
T ss_dssp CEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999999864
No 355
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=41.14 E-value=1.1e+02 Score=24.42 Aligned_cols=40 Identities=10% Similarity=0.052 Sum_probs=25.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~ 104 (202)
+++++|+|+++ -+...+++.|-+-|. ++.+ ..|.++++.+
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~ 46 (260)
T 1nff_A 7 GKVALVSGGAR--GMGASHVRAMVAEGA--KVVF--GDILDEEGKA 46 (260)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHH
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHH
Confidence 57899999998 456677777777774 3333 3455554443
No 356
>3qel_B Glutamate [NMDA] receptor subunit epsilon-2; ION channel, allosteric modulation, phenylethanolamine, N-glycosylation, extracellular; HET: NAG BMA MAN FUC QEL; 2.60A {Rattus norvegicus} PDB: 3qem_B* 3jpw_A* 3jpy_A*
Probab=41.12 E-value=67 Score=27.35 Aligned_cols=83 Identities=11% Similarity=0.109 Sum_probs=42.3
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC---CCchHH-HHHHHHHhhcCceEEEEecCC-cCchh---hhh
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---QNCKEA-LSYALSAKERGIKIIIVGDGV-EAHLS---GVA 131 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH---Rtp~~l-~~~~~~~~~~g~~ViIa~AG~-aa~Lp---gvv 131 (202)
-||+|.+++++......+..--..+..++++.....+ ..|..+ ..+.+.....+...||.+-.. ..+++ .-+
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dp~~~~~~~C~~l~~~~V~aiIgg~~s~~~a~a~~v~~i 85 (364)
T 3qel_B 6 GIAVILVGTSDEVAIKDAHEKDDFHHLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFI 85 (364)
T ss_dssp EEEEEEESSCCHHHHTC---------CCSEEEEEEEEECCCSHHHHHHHHHHHHHHSCEEEEEEEESSCCTHHHHHHHHH
T ss_pred EEEEEEcccchhhhhccccCccccccCCccceEEEEEecCCCHHHHHHHHHHHHHhCCeEEEEecCCCCchHHHHHHHHH
Confidence 4899999999844444444443445556665544433 245554 334444444455556654332 22333 335
Q ss_pred hhccCCcEEEe
Q 028883 132 AANSQILVIRV 142 (202)
Q Consensus 132 A~~T~~PVIgV 142 (202)
++....|+|..
T Consensus 86 ~~~~~iP~IS~ 96 (364)
T 3qel_B 86 SAQTLTPILGI 96 (364)
T ss_dssp HHHHTCCEEEE
T ss_pred HhccCCCEEEe
Confidence 67789999975
No 357
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=41.11 E-value=14 Score=30.59 Aligned_cols=80 Identities=21% Similarity=0.269 Sum_probs=40.8
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHh---------CCCeEEEEEccCCCchHHHHHHHHHhhcCce-EEEEecCCcC-chh
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDF---------GVPYEIKILPPHQNCKEALSYALSAKERGIK-IIIVGDGVEA-HLS 128 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~---------gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~-ViIa~AG~aa-~Lp 128 (202)
.|+|+=.+--.+.+.++..+.+-.- .+|| +.-|.-..++++.+.++.+++.|++ ++|+|-..+. .+.
T Consensus 2 ~IgvfDSG~Ggltv~~~l~~~~P~~~~iy~~D~~~~py--G~~s~~~i~~~~~~~~~~L~~~g~d~iviaCnTa~~~~~~ 79 (254)
T 1b73_A 2 KIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPY--GIRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALE 79 (254)
T ss_dssp EEEEEESSSGGGTHHHHHHHHSTTCEEEEEECTTTCCC--TTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHTTSHH
T ss_pred cEEEEECCccHHHHHHHHHHhCCCCcEEEeecCCCCCC--CcCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHH
Confidence 3666634444555666666655322 1122 1111111223444555666677887 4455544443 444
Q ss_pred hhhhhccCCcEEEe
Q 028883 129 GVAAANSQILVIRV 142 (202)
Q Consensus 129 gvvA~~T~~PVIgV 142 (202)
-+....+.||||+
T Consensus 80 -~lr~~~~iPvigi 92 (254)
T 1b73_A 80 -RLKKEINVPVFGV 92 (254)
T ss_dssp -HHHHHSSSCEEES
T ss_pred -HHHHhCCCCEEee
Confidence 4455578999995
No 358
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=41.10 E-value=1.3e+02 Score=23.81 Aligned_cols=63 Identities=5% Similarity=-0.040 Sum_probs=43.7
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-------------CCCchHHHHHHHHHhhc--CceEEEEecC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-------------HQNCKEALSYALSAKER--GIKIIIVGDG 122 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa-------------HRtp~~l~~~~~~~~~~--g~~ViIa~AG 122 (202)
+.++++|+|+++. +....++.|.+-|.. +.+++- -..++.+.++.++..++ .++++|-.||
T Consensus 21 m~k~vlITGas~g--IG~~la~~l~~~G~~--V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag 96 (251)
T 3orf_A 21 MSKNILVLGGSGA--LGAEVVKFFKSKSWN--TISIDFRENPNADHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAG 96 (251)
T ss_dssp -CCEEEEETTTSH--HHHHHHHHHHHTTCE--EEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCC
T ss_pred cCCEEEEECCCCH--HHHHHHHHHHHCCCE--EEEEeCCcccccccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 3679999999984 567788888887853 433331 23456777777776543 4699999999
Q ss_pred Cc
Q 028883 123 VE 124 (202)
Q Consensus 123 ~a 124 (202)
..
T Consensus 97 ~~ 98 (251)
T 3orf_A 97 GW 98 (251)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 359
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=41.06 E-value=86 Score=25.20 Aligned_cols=65 Identities=12% Similarity=0.091 Sum_probs=37.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC------------------------CCchHHHHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH------------------------QNCKEALSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH------------------------Rtp~~l~~~~~~~~~~-- 112 (202)
.++++|+|+++.--+...+++.|-+-|. +|.+++-. ..++.+.+++++..++
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4688888887433456677777776664 34333211 1233344444444322
Q ss_pred CceEEEEecCCcC
Q 028883 113 GIKIIIVGDGVEA 125 (202)
Q Consensus 113 g~~ViIa~AG~aa 125 (202)
+++++|-.||...
T Consensus 84 ~id~lv~nAg~~~ 96 (275)
T 2pd4_A 84 SLDFIVHSVAFAP 96 (275)
T ss_dssp CEEEEEECCCCCC
T ss_pred CCCEEEECCccCc
Confidence 5799999999653
No 360
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=41.03 E-value=1.3e+02 Score=23.86 Aligned_cols=80 Identities=15% Similarity=0.250 Sum_probs=52.7
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeE--------------------EEEEccCCCchHHHHHHHHHhh--cCceEE
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYE--------------------IKILPPHQNCKEALSYALSAKE--RGIKII 117 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~e--------------------v~V~SaHRtp~~l~~~~~~~~~--~g~~Vi 117 (202)
+| ++.|.-+-...+++.+..|..+|+++. +-++|.-+...++.+.++.+++ +|+++|
T Consensus 61 ~I-~i~G~G~S~~~A~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI 139 (220)
T 3etn_A 61 KL-VTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFI 139 (220)
T ss_dssp CE-EEECSHHHHHHHHHHHHHHHHTTCCEEECCTTGGGBTGGGGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEE
T ss_pred EE-EEEEecHHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhhhccCCCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEE
Confidence 44 444555458899999999999998643 4566777777888888888888 888765
Q ss_pred EEecCCcCchhhhhhhccCCcEEEecCC
Q 028883 118 IVGDGVEAHLSGVAAANSQILVIRVPLL 145 (202)
Q Consensus 118 Ia~AG~aa~LpgvvA~~T~~PVIgVP~~ 145 (202)
....-...-| +-..+. +|-+|..
T Consensus 140 ~IT~~~~s~L----a~~aD~-~l~~~~~ 162 (220)
T 3etn_A 140 VITGNPDSPL----ASESDV-CLSTGHP 162 (220)
T ss_dssp EEESCTTSHH----HHHSSE-EEECCCC
T ss_pred EEECCCCChh----HHhCCE-EEEcCCC
Confidence 4433333333 344444 4445553
No 361
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=41.01 E-value=1.5e+02 Score=24.38 Aligned_cols=85 Identities=15% Similarity=0.117 Sum_probs=56.1
Q ss_pred CCeEEEEe---cCCCCH--H-HHHHHHHHHHHh-----CCCeEEEEEccCCCchHHHHHHHHHhh-cCceEEEEecCCcC
Q 028883 58 APIVGIIM---ESDLDL--P-VMNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEA 125 (202)
Q Consensus 58 ~~~V~Iim---GS~SD~--~-v~~~a~~~L~~~-----gi~~ev~V~SaHRtp~~l~~~~~~~~~-~g~~ViIa~AG~aa 125 (202)
.-+||++. |..+++ . ..+-+...+++. |.++++.+.--.-.|++..+.++++.. ++.++||...+.+.
T Consensus 6 ~i~IG~~~p~sg~~a~~~g~~~~~g~~~a~~~i~ggi~G~~i~l~~~D~~~~~~~a~~~~~~li~~~~v~~iiG~~~s~~ 85 (379)
T 3n0w_A 6 QVTLGVLTDMSSVYADSAGKGSVAAVQLAIEDVGGKALGQPVKLVSADYQMKTDVALSIAREWFDRDGVDAIFDVVNSGT 85 (379)
T ss_dssp CCEEEEEECSSSTTTTTSHHHHHHHHHHHHHHTTTEETTEECEEEEEECTTCHHHHHHHHHHHHHHSCCCEEEECCCHHH
T ss_pred cEEEEEEeCCccccccccCHHHHHHHHHHHHHhcCCCCCeEEEEEEeCCCCCHHHHHHHHHHHHHhCCceEEEcCCCcHH
Confidence 35788875 445543 3 444455556665 455888888888899999888888765 77888887655443
Q ss_pred chhhh-hhhccCCcEEEe
Q 028883 126 HLSGV-AAANSQILVIRV 142 (202)
Q Consensus 126 ~Lpgv-vA~~T~~PVIgV 142 (202)
.++-. ++.....|+|..
T Consensus 86 ~~a~~~~~~~~~ip~i~~ 103 (379)
T 3n0w_A 86 ALAINNLVKDKKKLAFIT 103 (379)
T ss_dssp HHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHcCceEEEc
Confidence 33321 234468899975
No 362
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=41.00 E-value=50 Score=27.60 Aligned_cols=65 Identities=12% Similarity=0.033 Sum_probs=47.1
Q ss_pred HHHHHHhCCCeEEEEEccCCCc-hHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEecCC
Q 028883 78 ARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 145 (202)
Q Consensus 78 ~~~L~~~gi~~ev~V~SaHRtp-~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~ 145 (202)
...|+++|+.|-+-+.|.+|.. .++.+.++.+.+.|.++|+++-- ..-+... ... ...|||+=+-
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge-~~e~~~~-~~~-~~~iIayep~ 143 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPD-PRTSLAA-AAL-GPHAVAVEPP 143 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESS-HHHHHHH-HHT-CCSEEEECCG
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHH-hcC-CCCEEEEcCh
Confidence 5678999999999999999886 46888888888999998888743 3333222 222 3359998554
No 363
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=41.00 E-value=11 Score=31.64 Aligned_cols=81 Identities=20% Similarity=0.169 Sum_probs=46.7
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-----CCCchH----HHHHHHHHhhcCce-EEEEecCCcC-chh
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-----HQNCKE----ALSYALSAKERGIK-IIIVGDGVEA-HLS 128 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa-----HRtp~~----l~~~~~~~~~~g~~-ViIa~AG~aa-~Lp 128 (202)
.|+|+=.+--=+.++++..+.|-...+-| ---.+ -|+.+. +.+.++.+++.|++ ++|+|-..++ +|.
T Consensus 5 ~IgvfDSGvGGltv~~~i~~~lP~~~~iy--~~D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~d~iviaCNTas~~~l~ 82 (267)
T 2gzm_A 5 AIGVIDSGVGGLTVAKELIRQLPKERIIY--LGDTARCPYGPRSREEVRQFTWEMTEHLLDLNIKMLVIACNTATAVVLE 82 (267)
T ss_dssp CEEEEESSSTTHHHHHHHHHHCTTSCEEE--EECTTTCCCTTSCHHHHHHHHHHHHHHHHTTTCSEEEECCHHHHHHHHH
T ss_pred cEEEEeCCccHHHHHHHHHHHCCCCCEEE--ecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCchhhHHHHH
Confidence 48888666777888888887764322111 00111 244444 44455666677887 4455554443 344
Q ss_pred hhhhhccCCcEEEec
Q 028883 129 GVAAANSQILVIRVP 143 (202)
Q Consensus 129 gvvA~~T~~PVIgVP 143 (202)
-+......||||+.
T Consensus 83 -~lr~~~~iPvigi~ 96 (267)
T 2gzm_A 83 -EMQKQLPIPVVGVI 96 (267)
T ss_dssp -HHHHHCSSCEEESH
T ss_pred -HHHHhCCCCEEeec
Confidence 44556789999953
No 364
>1fui_A L-fucose isomerase; ketol isomerase, fucose metabolism, L-fucose to L conversion; HET: FOC; 2.50A {Escherichia coli} SCOP: b.43.2.1 c.85.1.1
Probab=40.86 E-value=2.5e+02 Score=26.81 Aligned_cols=110 Identities=11% Similarity=0.006 Sum_probs=64.6
Q ss_pred CCCeEEEEecCCCC----HHHHH--------HHHHHH-HHhC----CCeEEEE-EccCCCchHHHHHHHHHhhcCceEEE
Q 028883 57 DAPIVGIIMESDLD----LPVMN--------DAARTL-SDFG----VPYEIKI-LPPHQNCKEALSYALSAKERGIKIII 118 (202)
Q Consensus 57 ~~~~V~IimGS~SD----~~v~~--------~a~~~L-~~~g----i~~ev~V-~SaHRtp~~l~~~~~~~~~~g~~ViI 118 (202)
..++|||+.-++-- .+..+ +.++.+ +.+. .|+++-+ -+.--..+.....++...+.+++.+|
T Consensus 5 ~~~kiGi~p~~~gr~~~~r~~l~~~~~~~~~~~~~~i~~~L~~~~~~pvevV~~~~~i~~~~~a~~~~e~f~~~~vd~vi 84 (591)
T 1fui_A 5 SLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEKLRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTI 84 (591)
T ss_dssp SCCEEEEEEBCCCCTTTHHHHHHHHHHHHHHHHHHHHHHHCBCTTSCBCCEEECSSCBCSHHHHHHHHHHHHTTTEEEEE
T ss_pred CCceEEEEeccccccccchhchhHHHHHHHHHHHHHHHHHHhhcCCCCeEEEECCCccCCHHHHHHHHHHhhccCCCEEE
Confidence 35799999987766 33333 233333 3443 5677655 33555566666778888888888888
Q ss_pred EecCC--cCchhhhhhhcc-CCcEEEecCCCCCCChhh-HHHhhcC--CCCCeeeEE
Q 028883 119 VGDGV--EAHLSGVAAANS-QILVIRVPLLSEDWSEDD-VINSIRM--PSHVQVASV 169 (202)
Q Consensus 119 a~AG~--aa~LpgvvA~~T-~~PVIgVP~~~~~l~G~D-LlS~vqM--P~GvpVatV 169 (202)
+.-.- -++ -.+ -.. .+||+-.........|.+ |.+.+.. =.|+|...+
T Consensus 85 ~~~~tf~~~~--e~l-~~~~~~Pvli~~~~~~~~pg~v~l~a~~aa~~~~Gip~~~i 138 (591)
T 1fui_A 85 TVTPCWCYGS--ETI-DMDPTRPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSI 138 (591)
T ss_dssp EEESSCCCHH--HHS-CCCSSSCEEEEECBCSSSBHHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEcCcCCchH--HHH-HhcCCCCEEEeCCCCCCCCchHHHHHHHHHHHhcCCCeEEE
Confidence 76552 222 122 233 788887755554556766 6554321 257775554
No 365
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=40.85 E-value=17 Score=36.88 Aligned_cols=45 Identities=16% Similarity=0.176 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhcCceEEEEecCCcCchhhh--hhh------ccCCcEEEecCCC
Q 028883 101 EALSYALSAKERGIKIIIVGDGVEAHLSGV--AAA------NSQILVIRVPLLS 146 (202)
Q Consensus 101 ~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv--vA~------~T~~PVIgVP~~~ 146 (202)
...+.++.+++.+++.+|++-|-. .+-++ ++- ...+||||||-.-
T Consensus 650 ~~~~i~~~l~~~~Id~LvvIGGdg-S~~~a~~L~~~~~~~~~~~i~vVGIPkTI 702 (941)
T 3opy_B 650 DIGMIAYFFEKYGFDGLILVGGFE-AFISLHQLERARINYPSLRIPLVLIPATI 702 (941)
T ss_dssp CHHHHHHHHHHTTCSEEEEEESHH-HHHHHHHHHHGGGTCGGGCSCEEEEEBCS
T ss_pred hHHHHHHHHHHcCCCEEEEeCCch-HHHHHHHHHHHHHhcCccCCcEEeeeccc
Confidence 466788888899999888876643 33332 111 1369999999763
No 366
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=40.78 E-value=1e+02 Score=23.88 Aligned_cols=44 Identities=16% Similarity=0.107 Sum_probs=25.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALS 108 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~ 108 (202)
.++++|+|+++- +....++.|-+-|. ++ +-..|.++++.+..++
T Consensus 2 ~k~vlITGas~g--IG~~ia~~l~~~G~--~V--~~~~r~~~~~~~~~~~ 45 (235)
T 3l77_A 2 MKVAVITGASRG--IGEAIARALARDGY--AL--ALGARSVDRLEKIAHE 45 (235)
T ss_dssp CCEEEEESCSSH--HHHHHHHHHHHTTC--EE--EEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCC--EE--EEEeCCHHHHHHHHHH
Confidence 367888888874 45566666666664 23 2234555555554433
No 367
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=40.70 E-value=65 Score=25.74 Aligned_cols=27 Identities=11% Similarity=0.213 Sum_probs=19.3
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.+++++|+|+++- +...+++.|-+-|.
T Consensus 11 ~~k~vlITGas~G--IG~~~a~~L~~~G~ 37 (311)
T 3o26_A 11 KRRCAVVTGGNKG--IGFEICKQLSSNGI 37 (311)
T ss_dssp -CCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred CCcEEEEecCCch--HHHHHHHHHHHCCC
Confidence 3679999999874 55667777766664
No 368
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=40.62 E-value=12 Score=31.02 Aligned_cols=81 Identities=15% Similarity=0.186 Sum_probs=46.2
Q ss_pred CCCeEEEEecCCC----CH--HHHHHHHHHHHHhCCCeEEEEEccCCCchH------------------------HHHHH
Q 028883 57 DAPIVGIIMESDL----DL--PVMNDAARTLSDFGVPYEIKILPPHQNCKE------------------------ALSYA 106 (202)
Q Consensus 57 ~~~~V~IimGS~S----D~--~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~------------------------l~~~~ 106 (202)
..+.|+|.-|+.+ .| +...+.++.|.+-|+ .+-+.+....-+. +.+++
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~--~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~g~~sl~e~~ 256 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGY--QVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAV 256 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTC--EEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTTTSCHHHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCC--eEEEEeChhhHHHHHHHHHhhhhccccceEeccCcCCHHHHH
Confidence 3468999888833 23 477788887766554 3333332111111 11222
Q ss_pred HHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEecCC
Q 028883 107 LSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 145 (202)
Q Consensus 107 ~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~ 145 (202)
.-. +.++++|+.-.+..|| |+....|+|++--.
T Consensus 257 ali--~~a~l~I~~Dsg~~Hl----Aaa~g~P~v~lfg~ 289 (348)
T 1psw_A 257 ILI--AACKAIVTNDSGLMHV----AAALNRPLVALYGP 289 (348)
T ss_dssp HHH--HTSSEEEEESSHHHHH----HHHTTCCEEEEESS
T ss_pred HHH--HhCCEEEecCCHHHHH----HHHcCCCEEEEECC
Confidence 111 2367888887777777 44578999987544
No 369
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=40.54 E-value=1.1e+02 Score=24.20 Aligned_cols=25 Identities=12% Similarity=0.145 Sum_probs=14.8
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
++++|+|+++ -+...+++.|-+-|.
T Consensus 3 k~vlVTGas~--gIG~~ia~~l~~~G~ 27 (258)
T 3a28_C 3 KVAMVTGGAQ--GIGRGISEKLAADGF 27 (258)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 5677777776 344555555555553
No 370
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=40.50 E-value=1.3e+02 Score=24.18 Aligned_cols=44 Identities=11% Similarity=0.071 Sum_probs=26.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALS 108 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~ 108 (202)
.++++|+|+.+- +...+++.|-+-|. .+.++ .|.++++.+..++
T Consensus 11 ~k~vlVTGas~g--IG~aia~~l~~~G~--~V~~~--~r~~~~~~~~~~~ 54 (281)
T 3svt_A 11 DRTYLVTGGGSG--IGKGVAAGLVAAGA--SVMIV--GRNPDKLAGAVQE 54 (281)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHH
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHH
Confidence 578899998874 45566666666664 33332 3555554444433
No 371
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.48 E-value=23 Score=25.47 Aligned_cols=79 Identities=10% Similarity=0.001 Sum_probs=46.6
Q ss_pred eEEEEecCCCCHHHHH------HHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh
Q 028883 60 IVGIIMESDLDLPVMN------DAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA 133 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~------~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~ 133 (202)
.|.|.+- +.=+.++ ++.+.|++.||+|+..=+.. .|+...++.+.+.. ...-..+
T Consensus 9 ~V~vy~~--~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~--~~~~~~~l~~~~~~---------------~~~~~~g 69 (111)
T 2ct6_A 9 VIRVFIA--SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM--SEEQRQWMYKNVPP---------------EKKPTQG 69 (111)
T ss_dssp CEEEEEC--SSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT--CHHHHHHHHHSCCT---------------TTCCSSS
T ss_pred EEEEEEc--CCCCCcccchhHHHHHHHHHHcCCCEEEEECCC--CHHHHHHHHHHhcc---------------cccccCC
Confidence 4656653 4446777 89999999999988655443 45544444332100 0000125
Q ss_pred ccCCcEEEecCCCCCCChhh-HHHhhc
Q 028883 134 NSQILVIRVPLLSEDWSEDD-VINSIR 159 (202)
Q Consensus 134 ~T~~PVIgVP~~~~~l~G~D-LlS~vq 159 (202)
....|+|-+ .+..++|.| |..+.+
T Consensus 70 ~~tvP~vfi--~g~~iGG~d~l~~l~~ 94 (111)
T 2ct6_A 70 NPLPPQIFN--GDRYCGDYDSFFESKE 94 (111)
T ss_dssp SCCSCEEEE--TTEEEEEHHHHHHHHT
T ss_pred CCCCCEEEE--CCEEEeCHHHHHHHHH
Confidence 568888854 344567877 776654
No 372
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=40.27 E-value=95 Score=27.29 Aligned_cols=59 Identities=17% Similarity=0.102 Sum_probs=41.8
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEe
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~ 120 (202)
...|.|+..+..-+..+.+.+..|.+-|+.+|+- |+.-.++.+-.+.|.+.|+..+|.+
T Consensus 366 ~~~v~v~~~~~~~~~~a~~l~~~Lr~~Gi~ve~~----~~~~~~l~~q~k~A~~~g~~~~vii 424 (464)
T 4g84_A 366 ETQVLVASAQKKLLEERLKLVSELWDAGIKAELL----YKKNPKLLNQLQYCEEAGIPLVAII 424 (464)
T ss_dssp CCCEEEECSSSSCHHHHHHHHHHHHHTTCCEECC----SCSSCCHHHHHHHHHHHTCCEEEEC
T ss_pred cceEEEEeCCHHHHHHHHHHHHHHHHCCCcEEEE----eCCCCCHHHHHHHHHHCCCCEEEEE
Confidence 3568888888888999999999999999987763 3322334444556667788755544
No 373
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=40.06 E-value=1.1e+02 Score=24.03 Aligned_cols=27 Identities=7% Similarity=0.289 Sum_probs=15.3
Q ss_pred CchHHHHHHHHHhhc--CceEEEEecCCc
Q 028883 98 NCKEALSYALSAKER--GIKIIIVGDGVE 124 (202)
Q Consensus 98 tp~~l~~~~~~~~~~--g~~ViIa~AG~a 124 (202)
.++.+.+++++..++ +++++|-.||..
T Consensus 65 d~~~v~~~~~~~~~~~g~id~lv~nAg~~ 93 (246)
T 3osu_A 65 DADEVKAMIKEVVSQFGSLDVLVNNAGIT 93 (246)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 444555555444332 467888887754
No 374
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=40.05 E-value=1.4e+02 Score=23.61 Aligned_cols=62 Identities=5% Similarity=0.027 Sum_probs=41.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc---------------CCCchHHHHHHHHHhhc--CceEEEEec
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---------------HQNCKEALSYALSAKER--GIKIIIVGD 121 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa---------------HRtp~~l~~~~~~~~~~--g~~ViIa~A 121 (202)
.++++|+|+++ -+....++.|-+-|. ++.+.+- -..++.+.+++++..++ +++++|-.|
T Consensus 7 ~k~vlVTGas~--giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~A 82 (250)
T 2fwm_X 7 GKNVWVTGAGK--GIGYATALAFVEAGA--KVTGFDQAFTQEQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAA 82 (250)
T ss_dssp TCEEEEESTTS--HHHHHHHHHHHHTTC--EEEEEESCCCSSCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEeCchhhhcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 57899999998 556777888877775 3433321 12345666666655433 579999999
Q ss_pred CCc
Q 028883 122 GVE 124 (202)
Q Consensus 122 G~a 124 (202)
|..
T Consensus 83 g~~ 85 (250)
T 2fwm_X 83 GIL 85 (250)
T ss_dssp CCC
T ss_pred CcC
Confidence 964
No 375
>1eto_A FIS, factor for inversion stimulation; transcriptional activation region, DNA-binding protein, transcription activator; 1.90A {Escherichia coli} SCOP: a.4.1.12 PDB: 1etq_A 1ety_A 1fia_A 3fis_A 3iv5_A* 3jr9_A* 3jra_A* 3jrb_A* 3jrc_A* 3jrd_A* 3jre_A* 3jrf_A* 3jrg_A* 3jrh_A* 3jri_A* 1f36_A 1etv_A 1etk_A 1etx_A 1fip_A ...
Probab=39.88 E-value=12 Score=27.33 Aligned_cols=21 Identities=29% Similarity=0.494 Sum_probs=18.8
Q ss_pred HHHHHHccCCHHHHHHHHHHH
Q 028883 180 YAVKVLGIADEDLLERIRKYV 200 (202)
Q Consensus 180 ~Aa~IL~~~d~~l~~kl~~~~ 200 (202)
-||++||+....|+.||++|.
T Consensus 76 ~AA~~LGIsR~TL~rkLkk~g 96 (98)
T 1eto_A 76 RAALMMGINRGTLRKKLKKYG 96 (98)
T ss_dssp HHHHHHTSCHHHHHHHHHHTT
T ss_pred HHHHHhCCCHHHHHHHHHHhC
Confidence 468899999999999999985
No 376
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=39.74 E-value=63 Score=26.43 Aligned_cols=82 Identities=7% Similarity=-0.022 Sum_probs=48.7
Q ss_pred CeEEEEecCCCCH--HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh---
Q 028883 59 PIVGIIMESDLDL--PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA--- 133 (202)
Q Consensus 59 ~~V~IimGS~SD~--~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~--- 133 (202)
.+|+||.+.++|. ...+...+.|++.|++..... ...........+++....+.++|++.+... ...+++-.
T Consensus 150 ~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~--~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~-~a~~~~~~~~~ 226 (366)
T 3td9_A 150 KRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVF--FRSGDQDFSAQLSVAMSFNPDAIYITGYYP-EIALISRQARQ 226 (366)
T ss_dssp CEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEE--ECTTCCCCHHHHHHHHHTCCSEEEECSCHH-HHHHHHHHHHH
T ss_pred cEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEE--eCCCCccHHHHHHHHHhcCCCEEEEccchh-HHHHHHHHHHH
Confidence 5899998755554 345667788889999754443 223334445556666667788888743322 22333332
Q ss_pred -ccCCcEEEec
Q 028883 134 -NSQILVIRVP 143 (202)
Q Consensus 134 -~T~~PVIgVP 143 (202)
....|+++..
T Consensus 227 ~g~~~~~~~~~ 237 (366)
T 3td9_A 227 LGFTGYILAGD 237 (366)
T ss_dssp TTCCSEEEECG
T ss_pred cCCCceEEeeC
Confidence 2356888753
No 377
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=39.73 E-value=1.2e+02 Score=24.03 Aligned_cols=60 Identities=10% Similarity=0.071 Sum_probs=37.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchH-----------------------HHHHHHHHhhc--C
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKE-----------------------ALSYALSAKER--G 113 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~-----------------------l~~~~~~~~~~--g 113 (202)
.++++|+|+++ -+...+++.|-+-|. .+.++ .|.+++ +.+++++..++ +
T Consensus 2 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 75 (247)
T 3dii_A 2 NRGVIVTGGGH--GIGKQICLDFLEAGD--KVCFI--DIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEEEESTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 46889999998 456677777777775 33332 344433 44444443332 5
Q ss_pred ceEEEEecCCc
Q 028883 114 IKIIIVGDGVE 124 (202)
Q Consensus 114 ~~ViIa~AG~a 124 (202)
++++|-.||..
T Consensus 76 id~lv~nAg~~ 86 (247)
T 3dii_A 76 IDVLVNNACRG 86 (247)
T ss_dssp CCEEEECCC-C
T ss_pred CCEEEECCCCC
Confidence 78999988854
No 378
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}
Probab=39.54 E-value=14 Score=37.80 Aligned_cols=46 Identities=15% Similarity=0.123 Sum_probs=31.3
Q ss_pred hHHHHHHHHHhhcCceEEEEecCCcCchhhh--hhh------ccCCcEEEecCCC
Q 028883 100 KEALSYALSAKERGIKIIIVGDGVEAHLSGV--AAA------NSQILVIRVPLLS 146 (202)
Q Consensus 100 ~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv--vA~------~T~~PVIgVP~~~ 146 (202)
+...+.++.+++.+++.+|++-|-. .+-+. ++- ....||||||-.-
T Consensus 675 ~~~~~i~~~l~~~~Id~LvvIGGdg-S~~~a~~L~~~~~~y~~~~I~vVGIPkTI 728 (989)
T 3opy_A 675 DDMGTVAYYFQQYKFDGLIIIGGFE-AFTALYELDAARAQYPIFNIPMCCLPATV 728 (989)
T ss_dssp GGHHHHHHHHHHHTCSEEEEEESHH-HHHHHHHHHHHTTTCGGGCSCEEEEEBCS
T ss_pred hhHHHHHHHHHHcCCCEEEEeCCch-HHHHHHHHHHHHhhCCCcCCcEEeccccc
Confidence 4677788888888999888776643 33332 222 1379999999763
No 379
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=39.50 E-value=1.3e+02 Score=24.10 Aligned_cols=26 Identities=15% Similarity=0.041 Sum_probs=20.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+++- +...+++.|-+-|.
T Consensus 11 ~k~~lVTGas~G--IG~a~a~~la~~G~ 36 (277)
T 3tsc_A 11 GRVAFITGAARG--QGRAHAVRMAAEGA 36 (277)
T ss_dssp TCEEEEESTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCccH--HHHHHHHHHHHcCC
Confidence 679999999984 55677777777775
No 380
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=39.46 E-value=1.4e+02 Score=24.62 Aligned_cols=63 Identities=11% Similarity=0.122 Sum_probs=44.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc---------------CCCchHHHHHHHHHhhc--CceEEEEec
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP---------------HQNCKEALSYALSAKER--GIKIIIVGD 121 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa---------------HRtp~~l~~~~~~~~~~--g~~ViIa~A 121 (202)
++|++|+|+.|- +...+++.|-+-|.. |-+++- -..++.+.+++++..++ +++++|-.|
T Consensus 11 GK~alVTGas~G--IG~aia~~la~~Ga~--V~~~~r~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnA 86 (261)
T 4h15_A 11 GKRALITAGTKG--AGAATVSLFLELGAQ--VLTTARARPEGLPEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHML 86 (261)
T ss_dssp TCEEEESCCSSH--HHHHHHHHHHHTTCE--EEEEESSCCTTSCTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECC
T ss_pred CCEEEEeccCcH--HHHHHHHHHHHcCCE--EEEEECCchhCCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 689999999994 567888889888874 333321 13456677777766543 479999999
Q ss_pred CCcC
Q 028883 122 GVEA 125 (202)
Q Consensus 122 G~aa 125 (202)
|...
T Consensus 87 G~~~ 90 (261)
T 4h15_A 87 GGSS 90 (261)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 8653
No 381
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=39.44 E-value=1.1e+02 Score=24.96 Aligned_cols=56 Identities=18% Similarity=0.153 Sum_probs=39.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHh-hcCceEEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK-ERGIKIIIV 119 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~-~~g~~ViIa 119 (202)
.++++|+|+++ -+...+++.|-+-|. .+.++ .+|.++++.+..++.+ ..+.++.+.
T Consensus 9 ~k~~lVTGas~--GIG~aia~~la~~G~--~V~~~-~~r~~~~~~~~~~~l~~~~~~~~~~~ 65 (291)
T 1e7w_A 9 VPVALVTGAAK--RLGRSIAEGLHAEGY--AVCLH-YHRSAAEANALSATLNARRPNSAITV 65 (291)
T ss_dssp CCEEEETTCSS--HHHHHHHHHHHHTTC--EEEEE-ESSCHHHHHHHHHHHHHHSTTCEEEE
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCC--eEEEE-cCCCHHHHHHHHHHHhhhcCCeeEEE
Confidence 57999999998 567788888888885 33333 2489999988887765 334444433
No 382
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=39.41 E-value=98 Score=25.19 Aligned_cols=60 Identities=12% Similarity=0.194 Sum_probs=37.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchH------------------------HHHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKE------------------------ALSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~------------------------l~~~~~~~~~~-- 112 (202)
.++++|+|+++- +...+++.|-+-|. ++.+ .-|.+++ +.+++++..++
T Consensus 28 ~k~~lVTGas~G--IG~aia~~la~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 101 (272)
T 4dyv_A 28 KKIAIVTGAGSG--VGRAVAVALAGAGY--GVAL--AGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFG 101 (272)
T ss_dssp CCEEEETTTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEE--EECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 579999999984 55677777777775 3333 2344444 34444433222
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 102 ~iD~lVnnAg~~ 113 (272)
T 4dyv_A 102 RVDVLFNNAGTG 113 (272)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 578999999864
No 383
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=39.25 E-value=1.1e+02 Score=27.10 Aligned_cols=51 Identities=20% Similarity=0.195 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHHHH--------hCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEec
Q 028883 70 DLPVMNDAARTLSD--------FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (202)
Q Consensus 70 D~~v~~~a~~~L~~--------~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A 121 (202)
|-+.+.+..+.+.+ ..+|.-+++. ..-+.+.+.++++.+++.|++-|++..
T Consensus 197 ~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~-p~~~~~~~~~ia~~~~~aGadgi~v~n 255 (367)
T 3zwt_A 197 GKAELRRLLTKVLQERDGLRRVHRPAVLVKIA-PDLTSQDKEDIASVVKELGIDGLIVTN 255 (367)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGGCCEEEEEEC-SCCCHHHHHHHHHHHHHHTCCEEEECC
T ss_pred CHHHHHHHHHHHHHHHhhccccCCceEEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 44445555444432 5788888874 555667889999999999999888753
No 384
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=38.94 E-value=1.2e+02 Score=24.92 Aligned_cols=26 Identities=15% Similarity=0.124 Sum_probs=19.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+.+- +...+++.|-+-|.
T Consensus 49 ~k~vlVTGas~G--IG~aia~~la~~G~ 74 (294)
T 3r3s_A 49 DRKALVTGGDSG--IGRAAAIAYAREGA 74 (294)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 689999999884 45667777777775
No 385
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=38.86 E-value=39 Score=25.34 Aligned_cols=66 Identities=17% Similarity=0.022 Sum_probs=49.2
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCe-----------------------EEEEEccCCCchHHHHHHHHHhhcCc
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPY-----------------------EIKILPPHQNCKEALSYALSAKERGI 114 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~-----------------------ev~V~SaHRtp~~l~~~~~~~~~~g~ 114 (202)
+..|+||=+|+..-.......+-|.+.|.+. ++.++..-+.|+.+.++++++.+.|+
T Consensus 4 p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~dlp~vDlavi~~p~~~v~~~v~e~~~~g~ 83 (122)
T 3ff4_A 4 MKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGEVLGKTIINERPVIEGVDTVTLYINPQNQLSEYNYILSLKP 83 (122)
T ss_dssp CCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSEETTEECBCSCCCCTTCCEEEECSCHHHHGGGHHHHHHHCC
T ss_pred CCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCcCCCeeccCChHHCCCCCEEEEEeCHHHHHHHHHHHHhcCC
Confidence 3469999777777778888888998877631 03466667778888888888888888
Q ss_pred eEEEEecCC
Q 028883 115 KIIIVGDGV 123 (202)
Q Consensus 115 ~ViIa~AG~ 123 (202)
+.+|.-+|.
T Consensus 84 k~v~~~~G~ 92 (122)
T 3ff4_A 84 KRVIFNPGT 92 (122)
T ss_dssp SEEEECTTC
T ss_pred CEEEECCCC
Confidence 877766664
No 386
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=38.82 E-value=1.3e+02 Score=23.88 Aligned_cols=26 Identities=19% Similarity=0.133 Sum_probs=17.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++- +...+++.|-+-|.
T Consensus 7 ~k~vlVTGas~g--IG~~ia~~l~~~G~ 32 (263)
T 3ai3_A 7 GKVAVITGSSSG--IGLAIAEGFAKEGA 32 (263)
T ss_dssp TCEEEEESCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCch--HHHHHHHHHHHCCC
Confidence 467888888873 45566666666664
No 387
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=38.80 E-value=1.3e+02 Score=24.22 Aligned_cols=61 Identities=15% Similarity=0.190 Sum_probs=37.4
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHH------------------------HHHHHHHhhc-
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEA------------------------LSYALSAKER- 112 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l------------------------~~~~~~~~~~- 112 (202)
.+++++|+|+++- +...+++.|.+-|. .+.+. -|.++++ .+++++..++
T Consensus 26 ~gk~vlVTGas~g--IG~aia~~la~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 99 (266)
T 3grp_A 26 TGRKALVTGATGG--IGEAIARCFHAQGA--IVGLH--GTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREM 99 (266)
T ss_dssp TTCEEEESSTTSH--HHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHc
Confidence 3689999999985 45667777766674 33332 3444444 3444433222
Q ss_pred -CceEEEEecCCc
Q 028883 113 -GIKIIIVGDGVE 124 (202)
Q Consensus 113 -g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 100 g~iD~lvnnAg~~ 112 (266)
T 3grp_A 100 EGIDILVNNAGIT 112 (266)
T ss_dssp TSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 578899888864
No 388
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=38.78 E-value=14 Score=31.41 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=51.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC-----CCchHHHHHH----HHHhhcCceEEEEecC-CcC-ch
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH-----QNCKEALSYA----LSAKERGIKIIIVGDG-VEA-HL 127 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH-----Rtp~~l~~~~----~~~~~~g~~ViIa~AG-~aa-~L 127 (202)
..|+|+=.+--=+.+++++.+.|....+-| ---++| |+.+.+.++. +.+++.|++.||.+-. .++ +|
T Consensus 8 ~pIgvfDSGvGGLtv~~~i~~~lp~~~~iy--~~D~a~~PYG~~~~~~i~~~~~~~~~~L~~~g~~~iVIACNTa~~~al 85 (268)
T 3out_A 8 RPIGVFDSGIGGLTIVKNLMSILPNEDIIY--FGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIAK 85 (268)
T ss_dssp SCEEEEESSSTTHHHHHHHHHHCTTCCEEE--EECTTTCCCTTSCHHHHHHHHHHHHHHHHHTTCSEEEECCHHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHCCCCcEEE--ecCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEeCCChHHHHH
Confidence 459999888888999999888775443321 111122 7777766655 4556778875544433 333 34
Q ss_pred hhhhhhcc-CCcEEEe
Q 028883 128 SGVAAANS-QILVIRV 142 (202)
Q Consensus 128 pgvvA~~T-~~PVIgV 142 (202)
.- +.... +.||||+
T Consensus 86 ~~-lr~~~~~iPvigi 100 (268)
T 3out_A 86 DI-VQEIAKAIPVIDV 100 (268)
T ss_dssp HH-HHHHHTTSCEEEH
T ss_pred HH-HHHhcCCCCEEec
Confidence 44 44556 8999995
No 389
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=38.78 E-value=1.6e+02 Score=24.46 Aligned_cols=60 Identities=7% Similarity=0.109 Sum_probs=43.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc-------------------CCCchHHHHHHHHHhhcCceEEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP-------------------HQNCKEALSYALSAKERGIKIIIV 119 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa-------------------HRtp~~l~~~~~~~~~~g~~ViIa 119 (202)
++|++|||+.+ -+.+.+++.|-+-|.. |-++.- -..++.+.++++++. +++++|-
T Consensus 11 GK~alVTGas~--GIG~aia~~la~~Ga~--Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g--~iDiLVN 84 (242)
T 4b79_A 11 GQQVLVTGGSS--GIGAAIAMQFAELGAE--VVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALP--RLDVLVN 84 (242)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTCE--EEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCS--CCSEEEE
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCCE--EEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcC--CCCEEEE
Confidence 68999999999 5678888899888874 222221 134566777776653 4799999
Q ss_pred ecCCc
Q 028883 120 GDGVE 124 (202)
Q Consensus 120 ~AG~a 124 (202)
-||..
T Consensus 85 NAGi~ 89 (242)
T 4b79_A 85 NAGIS 89 (242)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99864
No 390
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=38.66 E-value=1.4e+02 Score=24.24 Aligned_cols=26 Identities=12% Similarity=0.049 Sum_probs=17.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+.+ -+...+++.|-+-|.
T Consensus 31 gk~~lVTGas~--GIG~aia~~la~~G~ 56 (271)
T 3v2g_A 31 GKTAFVTGGSR--GIGAAIAKRLALEGA 56 (271)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 57899999987 445566666666554
No 391
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=38.66 E-value=1.2e+02 Score=22.71 Aligned_cols=57 Identities=14% Similarity=0.193 Sum_probs=36.4
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHhCCCeEE---------------------EEEccCCCchHHHHHHHHHhhcCceEE
Q 028883 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEI---------------------KILPPHQNCKEALSYALSAKERGIKII 117 (202)
Q Consensus 61 V~IimGS~SD~~v~~~a~~~L~~~gi~~ev---------------------~V~SaHRtp~~l~~~~~~~~~~g~~Vi 117 (202)
-.++.|.-+-...++.....|..+|+++.. -+.|.-+...++.+.++.++++|+++|
T Consensus 41 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi 118 (187)
T 3sho_A 41 HVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTM 118 (187)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEE
Confidence 445666666788999999999999987532 344444445555555555555555433
No 392
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A*
Probab=38.41 E-value=32 Score=34.04 Aligned_cols=92 Identities=18% Similarity=0.212 Sum_probs=0.0
Q ss_pred CCCCCCCCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC---------------------------------
Q 028883 51 PNGDSTDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQ--------------------------------- 97 (202)
Q Consensus 51 ~~~~~~~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHR--------------------------------- 97 (202)
+.....+..+|+|++++ -|-|-|..+...+-+..+.+..+|.+.|+
T Consensus 393 ~~~~~~~~~~IgIltsG-GdapGmNaaIravv~~~~~~g~~v~Gi~~G~~GL~~~~~~~l~~~~v~~i~~~GGt~LGTsR 471 (762)
T 3o8l_A 393 PPAPKSGSYTVAVMNVG-APAAGMNAAVRSTVRIGLIQGNRVLVVHDGFEGPAKGQIEEAGWSYVGGWTGQGGSKLGSKR 471 (762)
T ss_dssp CCCCCSSCCEEEEEEES-SCCTTHHHHHHHHHHHHHHHTCEEEEESSTTHHHHHTCEEECCTTTTSSCTTCCSCSSCEEC
T ss_pred CccccccCCEEEEEecC-CCcHHHHHHHHHHHHHHHHCCCEEEEEeccccccccCCEEECCHHHhhhHHhCCCceeecCC
Q ss_pred --CchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhh-------ccCCcEEEec
Q 028883 98 --NCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAA-------NSQILVIRVP 143 (202)
Q Consensus 98 --tp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~-------~T~~PVIgVP 143 (202)
-++...+.++.+++.+++.+|++-|-...-....=+ ....||||||
T Consensus 472 ~~~~~~~~~~~~~l~~~~Id~LvvIGGdgS~~~a~~L~~~~~~~~~~~i~vvgiP 526 (762)
T 3o8l_A 472 TLPKKSFEQISANITKFNIQGLVIIGGFEAYTGGLELMEGRKQFDELCIPFVVIP 526 (762)
T ss_dssp CCSGGGHHHHHHHHHHTTCCCEEEEESHHHHHHHHHHHHHHHHCSTTCSCEEEEE
T ss_pred CCcHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHHHhccccCCCEEeec
No 393
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=37.93 E-value=1.1e+02 Score=26.91 Aligned_cols=60 Identities=13% Similarity=0.084 Sum_probs=47.4
Q ss_pred CeEEEEecCCCC-HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhc-CceEEE
Q 028883 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIII 118 (202)
Q Consensus 59 ~~V~IimGS~SD-~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViI 118 (202)
.++.|..|.+.+ .-+.+--.+.++++||.++..-....-+.+++.+.++++.++ .++=|+
T Consensus 39 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIl 100 (300)
T 4a26_A 39 GLASIIVGQRMDSKKYVQLKHKAAAEVGMASFNVELPEDISQEVLEVNVEKLNNDPNCHGII 100 (300)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEE
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCCEEE
Confidence 577788887643 566777788899999999999999999999999999988765 344333
No 394
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=37.92 E-value=94 Score=25.73 Aligned_cols=44 Identities=9% Similarity=0.106 Sum_probs=28.9
Q ss_pred CCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 58 APIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 58 ~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.+++++|+|+.+- +...+++.|-+-|. ++.++ -|.++++.+..+
T Consensus 40 ~~k~vlVTGas~G--IG~aia~~la~~G~--~V~~~--~r~~~~~~~~~~ 83 (293)
T 3rih_A 40 SARSVLVTGGTKG--IGRGIATVFARAGA--NVAVA--ARSPRELSSVTA 83 (293)
T ss_dssp TTCEEEETTTTSH--HHHHHHHHHHHTTC--EEEEE--ESSGGGGHHHHH
T ss_pred CCCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEEE--ECCHHHHHHHHH
Confidence 3689999999984 56677788877775 34333 355555444443
No 395
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=37.77 E-value=1.6e+02 Score=23.62 Aligned_cols=62 Identities=15% Similarity=0.185 Sum_probs=41.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC--------------CCchHHHHHHHHHhhc--CceEEEEecC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------QNCKEALSYALSAKER--GIKIIIVGDG 122 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH--------------Rtp~~l~~~~~~~~~~--g~~ViIa~AG 122 (202)
.++++|+|+++ -+....++.|.+-|. ++.+.+-. ..++.+.+++++..++ .++++|-.||
T Consensus 21 ~k~vlVTGas~--gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg 96 (253)
T 2nm0_A 21 SRSVLVTGGNR--GIGLAIARAFADAGD--KVAITYRSGEPPEGFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAG 96 (253)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEESSSCCCTTSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECS
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEeCChHhhccceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 57999999998 456778888887785 44433211 2345566666655332 4699999999
Q ss_pred Cc
Q 028883 123 VE 124 (202)
Q Consensus 123 ~a 124 (202)
..
T Consensus 97 ~~ 98 (253)
T 2nm0_A 97 VT 98 (253)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 396
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=37.76 E-value=1.2e+02 Score=23.48 Aligned_cols=44 Identities=11% Similarity=0.064 Sum_probs=27.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALS 108 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~ 108 (202)
+++++|+|+++- +...+++.|-+-|. .+.+ ..|.++++.+..++
T Consensus 14 ~k~vlITGas~g--IG~~ia~~l~~~G~--~V~~--~~r~~~~~~~~~~~ 57 (247)
T 3i1j_A 14 GRVILVTGAARG--IGAAAARAYAAHGA--SVVL--LGRTEASLAEVSDQ 57 (247)
T ss_dssp TCEEEESSTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHH
T ss_pred CCEEEEeCCCCh--HHHHHHHHHHHCCC--EEEE--EecCHHHHHHHHHH
Confidence 679999999984 45666777777674 2322 34555555444443
No 397
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=37.75 E-value=67 Score=26.86 Aligned_cols=29 Identities=17% Similarity=-0.080 Sum_probs=24.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP 87 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~ 87 (202)
.++++|+|..++--+...+++.|-+-|..
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~ 30 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVK 30 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCE
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCE
Confidence 47999999888777788899999888864
No 398
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=37.74 E-value=1.2e+02 Score=23.88 Aligned_cols=60 Identities=15% Similarity=0.194 Sum_probs=36.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHH------------------------HHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS------------------------YALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~------------------------~~~~~~~~-- 112 (202)
.++++|+|+++- +...+++.|-+-|. .+.+ ..|.++++.+ ++++..++
T Consensus 9 ~k~vlITGas~g--IG~~~a~~l~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 9 GKVALITGAGSG--FGEGMAKRFAKGGA--KVVI--VDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFG 82 (261)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCch--HHHHHHHHHHHCCC--EEEE--EcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 578999999975 45566666666664 3333 3355544443 33333222
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 83 ~id~li~~Ag~~ 94 (261)
T 3n74_A 83 KVDILVNNAGIG 94 (261)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCccC
Confidence 568899888864
No 399
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=37.74 E-value=1.1e+02 Score=24.51 Aligned_cols=40 Identities=15% Similarity=0.098 Sum_probs=23.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~ 104 (202)
.++++|+|+++ -+...+++.|-+-|. +|.+ ..|.++++.+
T Consensus 6 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~--~~r~~~~~~~ 45 (280)
T 1xkq_A 6 NKTVIITGSSN--GIGRTTAILFAQEGA--NVTI--TGRSSERLEE 45 (280)
T ss_dssp TCEEEETTCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHH
T ss_pred CCEEEEECCCC--hHHHHHHHHHHHCCC--EEEE--EeCCHHHHHH
Confidence 46788888887 455566666666664 3333 2355544443
No 400
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=37.70 E-value=64 Score=26.75 Aligned_cols=71 Identities=11% Similarity=0.107 Sum_probs=48.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQIL 138 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~P 138 (202)
.+|+||.=.. - ..++..+.+-||++.+... -.+++.+++.++++.++|+++||+. .+.-=+|-.-.+|
T Consensus 107 ~kIavVg~~~-~---~~~~~~i~~ll~~~i~~~~---~~~~ee~~~~i~~l~~~G~~vVVG~-----~~~~~~A~~~Gl~ 174 (225)
T 2pju_A 107 SSIGVVTYQE-T---IPALVAFQKTFNLRLDQRS---YITEEDARGQINELKANGTEAVVGA-----GLITDLAEEAGMT 174 (225)
T ss_dssp SCEEEEEESS-C---CHHHHHHHHHHTCCEEEEE---ESSHHHHHHHHHHHHHTTCCEEEES-----HHHHHHHHHTTSE
T ss_pred CcEEEEeCch-h---hhHHHHHHHHhCCceEEEE---eCCHHHHHHHHHHHHHCCCCEEECC-----HHHHHHHHHcCCc
Confidence 5788885433 2 3445566667888766554 4678999999999999999998873 2334455555666
Q ss_pred EEE
Q 028883 139 VIR 141 (202)
Q Consensus 139 VIg 141 (202)
.+=
T Consensus 175 ~vl 177 (225)
T 2pju_A 175 GIF 177 (225)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 401
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=37.69 E-value=1.5e+02 Score=23.94 Aligned_cols=58 Identities=16% Similarity=0.210 Sum_probs=37.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH------------------------HHHHhhcCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY------------------------ALSAKERGI 114 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~------------------------~~~~~~~g~ 114 (202)
+++++|+|+++ -+...+++.|-+-|. ++.+ .-|.+++..+. +++. .++
T Consensus 16 gk~vlVTGas~--gIG~~~a~~L~~~G~--~V~~--~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~i 87 (291)
T 3rd5_A 16 QRTVVITGANS--GLGAVTARELARRGA--TVIM--AVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGA 87 (291)
T ss_dssp TCEEEEECCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCE
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEE--EECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCC
Confidence 68999999998 456778888888785 3333 34555544433 3222 246
Q ss_pred eEEEEecCCc
Q 028883 115 KIIIVGDGVE 124 (202)
Q Consensus 115 ~ViIa~AG~a 124 (202)
+++|-.||..
T Consensus 88 D~lv~nAg~~ 97 (291)
T 3rd5_A 88 DVLINNAGIM 97 (291)
T ss_dssp EEEEECCCCC
T ss_pred CEEEECCcCC
Confidence 8888888864
No 402
>1kz1_A 6,7-dimethyl-8-ribityllumazine synthase; riboflavin biosynthesis, ligand binding, transferase; 2.00A {Schizosaccharomyces pombe} SCOP: c.16.1.1 PDB: 2a59_A* 2a58_A* 2a57_A* 1kyv_A* 1kyx_A* 1kyy_A* 1kz9_A 1kz4_A 1kz6_A
Probab=37.57 E-value=92 Score=24.97 Aligned_cols=118 Identities=14% Similarity=0.019 Sum_probs=73.2
Q ss_pred CCeEEEEecCCCCH---HHHHHHHHHHHH-hCCC---e-EEEEEccCCCchHHHHHHHHHhhcCceEEEEec----CCcC
Q 028883 58 APIVGIIMESDLDL---PVMNDAARTLSD-FGVP---Y-EIKILPPHQNCKEALSYALSAKERGIKIIIVGD----GVEA 125 (202)
Q Consensus 58 ~~~V~IimGS~SD~---~v~~~a~~~L~~-~gi~---~-ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A----G~aa 125 (202)
..+++||.+.-.+. .-.+.|.+.|++ .|+. + .++|-++.-.|--..++++ +..++.||+.. |..-
T Consensus 17 ~~riaIV~arfn~~I~~~Ll~ga~~~l~~~~Gv~~~~i~v~~VPGafEiP~aa~~la~---~~~yDavIaLG~VIrG~T~ 93 (159)
T 1kz1_A 17 ELRILIVHARGNLQAIEPLVKGAVETMIEKHDVKLENIDIESVPGSWELPQGIRASIA---RNTYDAVIGIGVLIKGSTM 93 (159)
T ss_dssp TCCEEEEECCTTHHHHHHHHHHHHHHHHHHHCCCGGGEEEEECSSGGGHHHHHHHHHH---HSCCSEEEEEEEEECCSSS
T ss_pred CCEEEEEEeeCcHHHHHHHHHHHHHHHHHHcCCCccceEEEECCcHHHHHHHHHHHHh---cCCCCEEEEecccccCCch
Confidence 35799999999888 778899999999 9986 3 3467788887777766654 35588888753 5555
Q ss_pred chhhh----------hhhccCCcEEEecCCCCCCChhhHHHhhcCCCCCeeeEEecCChhhHHHHHHHHHcc
Q 028883 126 HLSGV----------AAANSQILVIRVPLLSEDWSEDDVINSIRMPSHVQVASVPRNNAKNAALYAVKVLGI 187 (202)
Q Consensus 126 ~Lpgv----------vA~~T~~PVIgVP~~~~~l~G~DLlS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL~~ 187 (202)
|-==| ++-.+.+||+..=+...+. + -+.-+. |. +-.-|.|..||..|.+++.+
T Consensus 94 Hfd~Va~~v~~Gl~~v~L~~~vPV~~GVLT~~~~---e-QA~~Ra--g~---~~~~nKG~eaA~aalem~~l 156 (159)
T 1kz1_A 94 HFEYISEAVVHGLMRVGLDSGVPVILGLLTVLNE---E-QALYRA--GL---NGGHNHGNDWGSAAVEMGLK 156 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEESSH---H-HHHHHB--TC---TTCCBHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCEEEEEeCCCCH---H-HHHHHh--CC---ccccchHHHHHHHHHHHHHh
Confidence 43222 1223677777543332211 1 011111 11 00016788888888888764
No 403
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=37.53 E-value=1.3e+02 Score=23.58 Aligned_cols=26 Identities=12% Similarity=0.284 Sum_probs=14.1
Q ss_pred chHHHHHHHHHhhc--CceEEEEecCCc
Q 028883 99 CKEALSYALSAKER--GIKIIIVGDGVE 124 (202)
Q Consensus 99 p~~l~~~~~~~~~~--g~~ViIa~AG~a 124 (202)
++.+.+++++..++ +++++|-.||..
T Consensus 66 ~~~~~~~~~~~~~~~g~id~lv~nAg~~ 93 (246)
T 2uvd_A 66 AEDVTNMVKQTVDVFGQVDILVNNAGVT 93 (246)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 44444444433221 467888877753
No 404
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A*
Probab=37.52 E-value=1.2e+02 Score=24.57 Aligned_cols=55 Identities=16% Similarity=0.157 Sum_probs=34.3
Q ss_pred CCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh-----h---hhhccCCcEEEecCC
Q 028883 85 GVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG-----V---AAANSQILVIRVPLL 145 (202)
Q Consensus 85 gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg-----v---vA~~T~~PVIgVP~~ 145 (202)
|++++..+..- .| ...+.+.++ +++.||.++-+-+.+.. + +.-.++.||+-||..
T Consensus 245 ~~~~~~~~~~g--~~--~~~I~~~a~--~adliV~G~~~~~~~~~~l~Gsv~~~vl~~~~~pVlvv~~~ 307 (309)
T 3cis_A 245 NVAITRVVVRD--QP--ARQLVQRSE--EAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARES 307 (309)
T ss_dssp TSCEEEEEESS--CH--HHHHHHHHT--TCSEEEEESSCSSCCTTCSSCHHHHHHHHHCSSCEEEECC-
T ss_pred CCcEEEEEEcC--CH--HHHHHHhhC--CCCEEEECCCCCCCccccccCcHHHHHHhcCCCCEEEeCCC
Confidence 78888776642 33 334444444 68888888765544433 2 345688999999863
No 405
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=37.39 E-value=1.2e+02 Score=24.38 Aligned_cols=26 Identities=12% Similarity=0.164 Sum_probs=19.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+++- +...+++.|-+-|.
T Consensus 28 ~k~vlVTGas~g--IG~aia~~la~~G~ 53 (269)
T 4dmm_A 28 DRIALVTGASRG--IGRAIALELAAAGA 53 (269)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 679999999874 45666677766665
No 406
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=37.38 E-value=1.1e+02 Score=24.55 Aligned_cols=26 Identities=19% Similarity=0.225 Sum_probs=18.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+.+- +...+++.|-+-|.
T Consensus 20 ~k~vlVTGas~g--IG~aia~~l~~~G~ 45 (266)
T 4egf_A 20 GKRALITGATKG--IGADIARAFAAAGA 45 (266)
T ss_dssp TCEEEETTTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 578999999874 45556666666664
No 407
>2dxa_A Protein YBAK; trans-editing domain, prolyl-tRNA synthetase, structural genomics, NPPSFA; HET: MSE; 1.58A {Escherichia coli}
Probab=37.15 E-value=17 Score=28.02 Aligned_cols=53 Identities=15% Similarity=0.167 Sum_probs=29.9
Q ss_pred CCCHHHHHHHHHHHHHhCCCeEEEEE--cc--CCCchHHHHHHHHHhhcCceEEEEe
Q 028883 68 DLDLPVMNDAARTLSDFGVPYEIKIL--PP--HQNCKEALSYALSAKERGIKIIIVG 120 (202)
Q Consensus 68 ~SD~~v~~~a~~~L~~~gi~~ev~V~--Sa--HRtp~~l~~~~~~~~~~g~~ViIa~ 120 (202)
+||+..+..+.+.|++.||+|++.-. +. .++.+++.+++.--..+-+|-++.-
T Consensus 2 ~~~~~~~t~~~~~L~~~~i~y~~~~~~h~~~~~~~~~e~a~~l~~~~~~~~Ktlv~~ 58 (166)
T 2dxa_A 2 SSGSSGMTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQVYKTLLVA 58 (166)
T ss_dssp ------CCHHHHHHHHTTCCCEEEECCCCTTSCCSSCHHHHHHTCCTTTEEEEEEEE
T ss_pred CCCCCchhHHHHHHHHCCCCcEEEEEecCCcccchHHHHHHHcCCCHHHeeEEEEEE
Confidence 56788888999999999999998542 22 2556666555543233334555443
No 408
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=37.02 E-value=1.5e+02 Score=23.27 Aligned_cols=41 Identities=7% Similarity=-0.106 Sum_probs=25.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 105 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~ 105 (202)
.++++|+|+++ -+....++.|-+-|. ++ +-.-|.++++.+.
T Consensus 3 ~k~vlVTGas~--GIG~a~a~~l~~~G~--~V--~~~~r~~~~~~~~ 43 (235)
T 3l6e_A 3 LGHIIVTGAGS--GLGRALTIGLVERGH--QV--SMMGRRYQRLQQQ 43 (235)
T ss_dssp CCEEEEESTTS--HHHHHHHHHHHHTTC--EE--EEEESCHHHHHHH
T ss_pred CCEEEEECCCC--HHHHHHHHHHHHCCC--EE--EEEECCHHHHHHH
Confidence 46889999887 456677777777775 23 3334555544443
No 409
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=36.97 E-value=1.4e+02 Score=23.70 Aligned_cols=60 Identities=13% Similarity=0.122 Sum_probs=36.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCc------------------------hHHHHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC------------------------KEALSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp------------------------~~l~~~~~~~~~~-- 112 (202)
.++++|+|+.+- +...+++.|-+-|.. +.++ .|.+ +.+.+++++..++
T Consensus 8 ~k~vlVTGas~g--IG~~ia~~l~~~G~~--V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 8 GKSALITGSARG--IGRAFAEAYVREGAT--VAIA--DIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TCEEEEETCSSH--HHHHHHHHHHHTTCE--EEEE--ESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCCE--EEEE--eCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 578999999874 455666666666642 3222 3443 3444444443332
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 82 ~id~lv~~Ag~~ 93 (259)
T 4e6p_A 82 GLDILVNNAALF 93 (259)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 579999999863
No 410
>2vo9_A EAD500, L-alanyl-D-glutamate peptidase; cell WALL biogenesis/degradation, secreted, cell WALL, hydro; 1.8A {Bacteriophage A500} SCOP: d.65.1.5
Probab=36.93 E-value=24 Score=28.41 Aligned_cols=60 Identities=13% Similarity=0.127 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHH---HHhCCCeEEEEEccCCCchHHHHHHHHHhh-cCceEEEEecCCcCchhhhh
Q 028883 70 DLPVMNDAARTL---SDFGVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAHLSGVA 131 (202)
Q Consensus 70 D~~v~~~a~~~L---~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~-~g~~ViIa~AG~aa~Lpgvv 131 (202)
|-..++...+.+ ++-|| ++.|.|.+|+.++=.++..+... .|..+.-+-.|.|.|-.|..
T Consensus 34 ~~~aa~al~~m~~~a~~~Gi--~l~i~sgyRs~~~Q~~Ly~~~~~~~g~~~~~a~pg~S~H~~G~A 97 (179)
T 2vo9_A 34 YKITSDKTRNVIKKMAKEGI--YLCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGVA 97 (179)
T ss_dssp CHHHHHHHHHHHHHHHTTTC--CEEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTCE
T ss_pred CHHHHHHHHHHHHHHHHCCC--eEEEEEEECCHHHHHHHHHHhcccCCCceecCCCCCCCCCCccc
Confidence 344444444444 44566 68999999999999998765533 24344445567777776654
No 411
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=36.91 E-value=1.2e+02 Score=25.01 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=24.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~ 104 (202)
.++++|+|+++- +...+++.|-+-|. +|.++ .|.++++.+
T Consensus 34 ~k~vlVTGas~g--IG~aia~~L~~~G~--~V~~~--~r~~~~~~~ 73 (291)
T 3cxt_A 34 GKIALVTGASYG--IGFAIASAYAKAGA--TIVFN--DINQELVDR 73 (291)
T ss_dssp TCEEEEETCSSH--HHHHHHHHHHHTTC--EEEEE--ESSHHHHHH
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC--EEEEE--eCCHHHHHH
Confidence 578999999884 45666667766664 33332 355554443
No 412
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=36.86 E-value=1.7e+02 Score=25.31 Aligned_cols=53 Identities=17% Similarity=0.325 Sum_probs=35.6
Q ss_pred CHHHHHHHHHHHHH-hCCCeEEEEE-ccC--CCchHHHHHHHHHhhcCceEEEEecC
Q 028883 70 DLPVMNDAARTLSD-FGVPYEIKIL-PPH--QNCKEALSYALSAKERGIKIIIVGDG 122 (202)
Q Consensus 70 D~~v~~~a~~~L~~-~gi~~ev~V~-SaH--Rtp~~l~~~~~~~~~~g~~ViIa~AG 122 (202)
|...+.++.+.+.+ .++|..+++- +.- -+.+...++++.+++.|++.|++-++
T Consensus 110 ~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 110 DLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp CHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecC
Confidence 45566666666654 6888877553 221 12346788899999999998877654
No 413
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=36.79 E-value=97 Score=23.89 Aligned_cols=79 Identities=10% Similarity=0.061 Sum_probs=46.3
Q ss_pred CCCeEEEEecCCCCHHH-------HHHHHHHHHHh-----CCCe-EEEEEccCCCchHHHHHHHHHhh-cCceEEEEecC
Q 028883 57 DAPIVGIIMESDLDLPV-------MNDAARTLSDF-----GVPY-EIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDG 122 (202)
Q Consensus 57 ~~~~V~IimGS~SD~~v-------~~~a~~~L~~~-----gi~~-ev~V~SaHRtp~~l~~~~~~~~~-~g~~ViIa~AG 122 (202)
.+++|+||+-|+. +.. ..-..+.|+++ |+.. +..++ --.++.+.+-++++.+ .++++||+..|
T Consensus 4 ~~~rv~IistGde-~~~G~~~d~n~~~l~~~l~~~~~~~~G~~v~~~~iv--~Dd~~~i~~~l~~~~~~~~~DlVittGG 80 (167)
T 1uuy_A 4 PEYKVAILTVSDT-VSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVV--PDEVERIKDILQKWSDVDEMDLILTLGG 80 (167)
T ss_dssp CSEEEEEEEECHH-HHTTSSCCSHHHHHHHHHHHTTTTTTSEEEEEEEEE--CSCHHHHHHHHHHHHHTSCCSEEEEESC
T ss_pred CCcEEEEEEECCc-ccCCCCccCcHHHHHHHHHhccccCCCcEEeEEEEc--CCCHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 4578999986542 110 11345677777 7643 23333 2345666666666543 46899988877
Q ss_pred Cc----CchhhhhhhccCCc
Q 028883 123 VE----AHLSGVAAANSQIL 138 (202)
Q Consensus 123 ~a----a~LpgvvA~~T~~P 138 (202)
.+ ...+-+++....++
T Consensus 81 ~g~g~~D~t~~a~~~~~~~~ 100 (167)
T 1uuy_A 81 TGFTPRDVTPEATKKVIERE 100 (167)
T ss_dssp CSSSTTCCHHHHHHHHCSEE
T ss_pred CCCCCCCchHHHHHHHhcCC
Confidence 65 45677777665444
No 414
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=36.78 E-value=1.5e+02 Score=23.48 Aligned_cols=26 Identities=19% Similarity=0.100 Sum_probs=18.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++- +...+++.|-+-|.
T Consensus 13 ~k~vlVTGas~g--IG~~ia~~l~~~G~ 38 (267)
T 1iy8_A 13 DRVVLITGGGSG--LGRATAVRLAAEGA 38 (267)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 578999999874 45566666666664
No 415
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=36.77 E-value=31 Score=30.51 Aligned_cols=52 Identities=10% Similarity=0.065 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhCCCeE-------------------------EEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCch
Q 028883 73 VMNDAARTLSDFGVPYE-------------------------IKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHL 127 (202)
Q Consensus 73 v~~~a~~~L~~~gi~~e-------------------------v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~L 127 (202)
+...+.+.|+++|++.+ -+|...|+....+.++.++ ++|+|+++|...-+
T Consensus 162 Tp~gv~~lL~~~~i~l~Gk~vvViGRS~iVGkPla~LL~~~~ATVTi~Hs~T~dl~~~~~~-----ADIvV~A~G~p~~i 236 (303)
T 4b4u_A 162 TPAGIMTILKENNIEIAGKHAVVVGRSAILGKPMAMMLLQANATVTICHSRTQNLPELVKQ-----ADIIVGAVGKAELI 236 (303)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHHHHT-----CSEEEECSCSTTCB
T ss_pred cHHHHHHHHHHHCCCCCCCEEEEEeccccccchHHHHHHhcCCEEEEecCCCCCHHHHhhc-----CCeEEeccCCCCcc
Q ss_pred hh
Q 028883 128 SG 129 (202)
Q Consensus 128 pg 129 (202)
.+
T Consensus 237 ~~ 238 (303)
T 4b4u_A 237 QK 238 (303)
T ss_dssp CG
T ss_pred cc
No 416
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=36.62 E-value=15 Score=31.51 Aligned_cols=77 Identities=12% Similarity=0.137 Sum_probs=50.3
Q ss_pred CeEEEEecCCCCHH---HHHHHHHHHHHhCCCe-EEEEEc---cCC--CchHHHHHHHHHhhcCc--eEEEEecCC----
Q 028883 59 PIVGIIMESDLDLP---VMNDAARTLSDFGVPY-EIKILP---PHQ--NCKEALSYALSAKERGI--KIIIVGDGV---- 123 (202)
Q Consensus 59 ~~V~IimGS~SD~~---v~~~a~~~L~~~gi~~-ev~V~S---aHR--tp~~l~~~~~~~~~~g~--~ViIa~AG~---- 123 (202)
-+|+++.|++-+.. .-++..+.|++.|.++ |++.-+ -.+ -|+.....++...+..+ -|+|++.|.
T Consensus 20 mkiali~~~sqa~kN~~lKe~i~~~L~~~G~eV~D~G~~s~~d~~svDYPd~a~~vA~~V~~g~~d~GIliCGTGiG~sI 99 (231)
T 3c5y_A 20 MKIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNYGMYTAEDKASLTYVMNGLLAGILLNSGAADFVVTGCGTGMGSML 99 (231)
T ss_dssp CEEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEECCCCSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEEESSSHHHHH
T ss_pred ceEEEEecCCHhhhHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCChHHHHHHHHHHHHcCCCCeEEEEcCCcHHHHH
Confidence 58999999999954 5567778899999752 344332 111 46666666655544433 588888874
Q ss_pred -cCchhhhhhhcc
Q 028883 124 -EAHLSGVAAANS 135 (202)
Q Consensus 124 -aa~LpgvvA~~T 135 (202)
+|-.||+-|+++
T Consensus 100 AANKv~GIRAAlc 112 (231)
T 3c5y_A 100 AANAMPGVFCGLV 112 (231)
T ss_dssp HHHTSTTCCEEEC
T ss_pred HHhcCCCeEEEEe
Confidence 556677777763
No 417
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=36.57 E-value=92 Score=24.74 Aligned_cols=43 Identities=14% Similarity=0.151 Sum_probs=27.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.++++|+|+.+- +...+++.|-+-|. .+.+ ..|.++++.+..+
T Consensus 12 ~k~vlVTGas~g--IG~aia~~l~~~G~--~V~~--~~r~~~~~~~~~~ 54 (252)
T 3f1l_A 12 DRIILVTGASDG--IGREAAMTYARYGA--TVIL--LGRNEEKLRQVAS 54 (252)
T ss_dssp TCEEEEESTTSH--HHHHHHHHHHHTTC--EEEE--EESCHHHHHHHHH
T ss_pred CCEEEEeCCCCh--HHHHHHHHHHHCCC--EEEE--EeCCHHHHHHHHH
Confidence 679999999984 55667777777775 3332 3455555544443
No 418
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=36.57 E-value=31 Score=27.78 Aligned_cols=76 Identities=18% Similarity=0.180 Sum_probs=48.0
Q ss_pred CeEEEEecCCCC-HHHHHHHHHHHHHhCCCe-EEEEEccCC--CchHHHHHHHHHhhcCc--eEEEEecCC-----cCch
Q 028883 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPY-EIKILPPHQ--NCKEALSYALSAKERGI--KIIIVGDGV-----EAHL 127 (202)
Q Consensus 59 ~~V~IimGS~SD-~~v~~~a~~~L~~~gi~~-ev~V~SaHR--tp~~l~~~~~~~~~~g~--~ViIa~AG~-----aa~L 127 (202)
..|-|..|||-. .+.=++..+.|++.|.++ |++.-+-.+ -|+...+.++...+..+ -|+|++.|. +|-.
T Consensus 11 ~~~~i~igsDhaG~~lK~~i~~~L~~~G~eV~D~G~~~~~~~dYpd~a~~va~~V~~g~~d~GIliCGTGiG~siaANKv 90 (155)
T 1o1x_A 11 HHVKIAIASDHAAFELKEKVKNYLLGKGIEVEDHGTYSEESVDYPDYAKKVVQSILSNEADFGILLCGTGLGMSIAANRY 90 (155)
T ss_dssp CCCEEEEEECSTTHHHHHHHHHHHHHTTCEEEECCCCSSSCCCHHHHHHHHHHHHHTTSCSEEEEEESSSHHHHHHHTTS
T ss_pred cceeEEEeeCchHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCChHHHHHHHHHHHHcCCCceEEEEcCCcHHHHHHhhcC
Confidence 457888999877 777778888999999853 344434332 35555555555444333 588887774 4444
Q ss_pred hhhhhhc
Q 028883 128 SGVAAAN 134 (202)
Q Consensus 128 pgvvA~~ 134 (202)
||+-|++
T Consensus 91 ~GIRAAl 97 (155)
T 1o1x_A 91 RGIRAAL 97 (155)
T ss_dssp TTCCEEE
T ss_pred CCeEEEE
Confidence 5555544
No 419
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=36.51 E-value=1.4e+02 Score=24.07 Aligned_cols=37 Identities=16% Similarity=-0.017 Sum_probs=21.6
Q ss_pred HHHHhhcCceEEEEecCCcCchhhhh-hhccCCcEEEec
Q 028883 106 ALSAKERGIKIIIVGDGVEAHLSGVA-AANSQILVIRVP 143 (202)
Q Consensus 106 ~~~~~~~g~~ViIa~AG~aa~Lpgvv-A~~T~~PVIgVP 143 (202)
.+..++...++|++-.+.. .+++.+ +-....|+|-..
T Consensus 89 ~~~l~~~~pDvv~~~~~~~-~~~~~~~~~~~~~p~v~~~ 126 (364)
T 1f0k_A 89 RAIMKAYKPDVVLGMGGYV-SGPGGLAAWSLGIPVVLHE 126 (364)
T ss_dssp HHHHHHHCCSEEEECSSTT-HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhcCCCEEEEeCCcC-chHHHHHHHHcCCCEEEEe
Confidence 3334444689999875443 344444 445678888543
No 420
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=36.43 E-value=91 Score=27.37 Aligned_cols=61 Identities=13% Similarity=0.061 Sum_probs=0.0
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh
Q 028883 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 129 (202)
Q Consensus 57 ~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg 129 (202)
....|.||=+|.. +.+.++..|...| ..+.|+ |+..+.+.+++ +.++++|++.|...-+.+
T Consensus 164 ~gk~vvVIG~s~i---VG~p~A~lL~~~g--AtVtv~--hs~t~~L~~~~-----~~ADIVI~Avg~p~~I~~ 224 (301)
T 1a4i_A 164 AGRHAVVVGRSKI---VGAPMHDLLLWNN--ATVTTC--HSKTAHLDEEV-----NKGDILVVATGQPEMVKG 224 (301)
T ss_dssp TTCEEEEECCCTT---THHHHHHHHHHTT--CEEEEE--CTTCSSHHHHH-----TTCSEEEECCCCTTCBCG
T ss_pred CCCEEEEECCCch---HHHHHHHHHHhCC--CeEEEE--ECCcccHHHHh-----ccCCEEEECCCCcccCCH
No 421
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=36.40 E-value=1.7e+02 Score=25.67 Aligned_cols=22 Identities=18% Similarity=0.415 Sum_probs=11.7
Q ss_pred hHHHHHHHHHcc-CCHHHHHHHH
Q 028883 176 NAALYAVKVLGI-ADEDLLERIR 197 (202)
Q Consensus 176 NAAl~Aa~IL~~-~d~~l~~kl~ 197 (202)
+..-+|..|..+ .|++.++++.
T Consensus 508 ~~~~la~~i~~l~~~~~~~~~~~ 530 (568)
T 2vsy_A 508 DDAAFVAKAVALASDPAALTALH 530 (568)
T ss_dssp SHHHHHHHHHHHHHCHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCHHHHHHHH
Confidence 334444444443 4777776664
No 422
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=36.37 E-value=1.6e+02 Score=23.49 Aligned_cols=26 Identities=23% Similarity=0.199 Sum_probs=14.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++- +...+++.|-+-|.
T Consensus 4 ~k~vlVTGas~g--IG~aia~~l~~~G~ 29 (258)
T 3oid_A 4 NKCALVTGSSRG--VGKAAAIRLAENGY 29 (258)
T ss_dssp CCEEEESSCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEecCCch--HHHHHHHHHHHCCC
Confidence 456777777663 34455555555554
No 423
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=36.33 E-value=1.2e+02 Score=26.45 Aligned_cols=60 Identities=18% Similarity=0.314 Sum_probs=47.0
Q ss_pred CeEEEEecCCCCH-HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhc-CceEEE
Q 028883 59 PIVGIIMESDLDL-PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIII 118 (202)
Q Consensus 59 ~~V~IimGS~SD~-~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViI 118 (202)
.++.|..|.+.+- -+.+--.+.++++|+.++..-....-+.+++.+.++++.++ .++=|+
T Consensus 36 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIl 97 (285)
T 3l07_A 36 KLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAIL 97 (285)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEE
T ss_pred eEEEEEECCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCcEEE
Confidence 5677777877554 46677788899999999999999999999999999988765 334333
No 424
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=36.32 E-value=1.2e+02 Score=25.91 Aligned_cols=62 Identities=15% Similarity=0.107 Sum_probs=38.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEcc--------------------------------CCCchHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPP--------------------------------HQNCKEALSYA 106 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~Sa--------------------------------HRtp~~l~~~~ 106 (202)
.++++|+|+++ -+...+++.|-+-|. .|.+++- -+.++.+.+++
T Consensus 45 gk~vlVTGas~--GIG~aia~~La~~Ga--~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 45 GCTVFITGASR--GIGKAIALKAAKDGA--NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHTTTC--EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCEEEEeCCCh--HHHHHHHHHHHHCCC--EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 68999999998 455667777776675 3333321 12344555555
Q ss_pred HHHhhc--CceEEEEecCCc
Q 028883 107 LSAKER--GIKIIIVGDGVE 124 (202)
Q Consensus 107 ~~~~~~--g~~ViIa~AG~a 124 (202)
++..++ +++++|-.||..
T Consensus 121 ~~~~~~~g~iDilVnnAG~~ 140 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAI 140 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCCC
Confidence 555433 578888888853
No 425
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=36.30 E-value=1.4e+02 Score=24.56 Aligned_cols=84 Identities=21% Similarity=0.281 Sum_probs=54.4
Q ss_pred CeEEEEe---cCCCCH--H-HHHHHHHHHHHh-----CCCeEEEEEccCCCchHHHHHHHHHhh-cCceEEEEecCCcCc
Q 028883 59 PIVGIIM---ESDLDL--P-VMNDAARTLSDF-----GVPYEIKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVEAH 126 (202)
Q Consensus 59 ~~V~Iim---GS~SD~--~-v~~~a~~~L~~~-----gi~~ev~V~SaHRtp~~l~~~~~~~~~-~g~~ViIa~AG~aa~ 126 (202)
-+||++. |..+++ . ..+-+...++++ |.++++.+.--.-.|++..+.++++.. +++++||...+.+..
T Consensus 5 i~IG~~~p~sg~~a~~~g~~~~~g~~~A~~~~~ggi~G~~i~l~~~D~~~~~~~a~~~~~~li~~~~v~~iiG~~~s~~~ 84 (375)
T 3i09_A 5 VKIGFITDMSGLYADIDGQGGLEAIKMAVADFGGKVNGKPIEVVYADHQNKADIAASKAREWMDRGGLDLLVGGTNSATA 84 (375)
T ss_dssp EEEEEEECSSSTTTTTSHHHHHHHHHHHHHHHTSEETTEEEEEEEEECTTCHHHHHHHHHHHHHHSCEEEEEECSCHHHH
T ss_pred eEEEEEeCCCcccccccCHHHHHHHHHHHHHhCCCCCCeEEEEEEecCCCCHHHHHHHHHHHHhhCCCEEEECCCCcHHH
Confidence 3677775 445553 3 444445556665 445888888888899999888888766 777888775544433
Q ss_pred hhhh-hhhccCCcEEEe
Q 028883 127 LSGV-AAANSQILVIRV 142 (202)
Q Consensus 127 Lpgv-vA~~T~~PVIgV 142 (202)
++-. ++.....|+|..
T Consensus 85 ~a~~~~~~~~~ip~i~~ 101 (375)
T 3i09_A 85 LSMNQVAAEKKKVYINI 101 (375)
T ss_dssp HHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHcCceEEEe
Confidence 3321 233467899975
No 426
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=36.28 E-value=20 Score=29.53 Aligned_cols=41 Identities=17% Similarity=0.210 Sum_probs=25.8
Q ss_pred HHHHHHHHHhhcCceEEEEecC-CcCchhhhhhhccCCcEEEe
Q 028883 101 EALSYALSAKERGIKIIIVGDG-VEAHLSGVAAANSQILVIRV 142 (202)
Q Consensus 101 ~l~~~~~~~~~~g~~ViIa~AG-~aa~LpgvvA~~T~~PVIgV 142 (202)
.+.+.++.+++.|++.|+.+.. ++..+ --+...++.||||+
T Consensus 64 ~l~~~~~~L~~~g~~~iviaCNTa~~~~-~~l~~~~~iPvi~i 105 (231)
T 3ojc_A 64 LLSNAAISLKHAGAEVIVVCTNTMHKVA-DDIEAACGLPLLHI 105 (231)
T ss_dssp HHHHHHHHHHHHTCCEEEECSSGGGGGH-HHHHHHHCSCBCCH
T ss_pred HHHHHHHHHHhcCCCEEEEeCCchHHHH-HHHHHhCCCCEecc
Confidence 3455556666778875554444 44444 55666778899986
No 427
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=36.08 E-value=1.7e+02 Score=23.53 Aligned_cols=60 Identities=12% Similarity=0.043 Sum_probs=38.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCC------------------------chHHHHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQN------------------------CKEALSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRt------------------------p~~l~~~~~~~~~~-- 112 (202)
+++++|+|+++- +...+++.|-+-|. ++.++ .|. ++.+.+++++..++
T Consensus 11 ~k~vlVTGas~g--IG~aia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 11 NKVAIITGACGG--IGLETSRVLARAGA--RVVLA--DLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC--EEEEE--ECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHCCC--EEEEE--cCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 679999999984 56677777777775 33333 233 33344444444332
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 85 ~id~lv~nAg~~ 96 (271)
T 3tzq_B 85 RLDIVDNNAAHS 96 (271)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 579999999865
No 428
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=36.07 E-value=51 Score=27.48 Aligned_cols=65 Identities=14% Similarity=0.075 Sum_probs=46.5
Q ss_pred HHHHHHhCCCeEEEEEccCCCc-hHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEecCC
Q 028883 78 ARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPLL 145 (202)
Q Consensus 78 ~~~L~~~gi~~ev~V~SaHRtp-~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~~ 145 (202)
...|+.+|+.|-+-..|.+|.. .++.+.++.+.+.|.++|+++-- .--+... .. ....|||+=+-
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge-~~e~~~~-~~-~~~~iIayep~ 146 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNN-PAVSAAV-AA-LNPDYVAVEPP 146 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESS-HHHHHHH-HT-TCCSEEEECCT
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCC-HHHHHHH-hc-CCCCEEEEeCh
Confidence 5678999999999999998886 46888888888999998888743 3222222 12 23349998443
No 429
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=35.71 E-value=1.3e+02 Score=22.54 Aligned_cols=60 Identities=10% Similarity=0.065 Sum_probs=39.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAH 126 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~ 126 (202)
-+++|++|+... .+...++.+|+. .+.+..--|+.+.++.+.+.-...+++..+-+....
T Consensus 56 ~~~~i~T~~~~~-----~~~~~~~~lgi~---~~~~~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~ 115 (176)
T 3mmz_A 56 LTMLILSTEQNP-----VVAARARKLKIP---VLHGIDRKDLALKQWCEEQGIAPERVLYVGNDVNDL 115 (176)
T ss_dssp CEEEEEESSCCH-----HHHHHHHHHTCC---EEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CeEEEEECcChH-----HHHHHHHHcCCe---eEeCCCChHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 579999988764 456778899998 344444446666666665543334677777776443
No 430
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=35.69 E-value=1.5e+02 Score=23.09 Aligned_cols=62 Identities=5% Similarity=-0.060 Sum_probs=40.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC---------------CCchHHHHHHHHHhh----cCceEEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH---------------QNCKEALSYALSAKE----RGIKIIIV 119 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH---------------Rtp~~l~~~~~~~~~----~g~~ViIa 119 (202)
.++++|+|+++ -+....++.|.+-|. ++.+++-. ..++.+.+++++..+ .+++++|-
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~ 82 (241)
T 1dhr_A 7 ARRVLVYGGRG--ALGSRCVQAFRARNW--WVASIDVVENEEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILC 82 (241)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHTTTC--EEEEEESSCCTTSSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCEEEEECCCc--HHHHHHHHHHHhCCC--EEEEEeCChhhccCCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 57899999998 567788888888775 44443211 113445555555433 25899999
Q ss_pred ecCCc
Q 028883 120 GDGVE 124 (202)
Q Consensus 120 ~AG~a 124 (202)
.||..
T Consensus 83 ~Ag~~ 87 (241)
T 1dhr_A 83 VAGGW 87 (241)
T ss_dssp CCCCC
T ss_pred ccccc
Confidence 99964
No 431
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=35.57 E-value=1.3e+02 Score=23.73 Aligned_cols=23 Identities=13% Similarity=0.024 Sum_probs=14.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSD 83 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~ 83 (202)
.++++|+|+.+ -+...+++.|.+
T Consensus 6 ~k~~lVTGas~--gIG~~ia~~l~~ 28 (259)
T 1oaa_A 6 CAVCVLTGASR--GFGRALAPQLAR 28 (259)
T ss_dssp SEEEEESSCSS--HHHHHHHHHHHT
T ss_pred CcEEEEeCCCC--hHHHHHHHHHHH
Confidence 46778888776 344555555555
No 432
>4hi7_A GI20122; GST, glutathione S-transferase, enzyme function initiative, structural genomics, unknown function; HET: GSH; 1.25A {Drosophila mojavensis}
Probab=35.46 E-value=60 Score=25.07 Aligned_cols=36 Identities=22% Similarity=0.374 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 72 PVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 72 ~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
|.++++.-.|++.|++||...+.......+-.+|.+
T Consensus 13 p~~~~vr~~L~~~gi~ye~~~v~~~~~~~~~~~~~~ 48 (228)
T 4hi7_A 13 PPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLK 48 (228)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCTTTTGGGSHHHHH
T ss_pred hHHHHHHHHHHHhCCCCEEEEecCCCcccCCHHHHH
Confidence 789999999999999999988776555444555654
No 433
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=35.20 E-value=1.3e+02 Score=26.27 Aligned_cols=60 Identities=13% Similarity=0.165 Sum_probs=46.8
Q ss_pred CeEEEEecCCCC-HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhc-CceEEE
Q 028883 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIII 118 (202)
Q Consensus 59 ~~V~IimGS~SD-~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViI 118 (202)
.+..|+.|.+.+ .-+.+--.+.++++|+.++.......-+.+++.+.++++.++ .++=|+
T Consensus 37 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIl 98 (286)
T 4a5o_A 37 GLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGIL 98 (286)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCHHHHHHHHHHHHTCTTCCEEE
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEE
Confidence 567777777654 455677788899999999999999999999999999988765 344333
No 434
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=34.94 E-value=1.7e+02 Score=23.68 Aligned_cols=26 Identities=27% Similarity=0.252 Sum_probs=19.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++- +...+++.|-+-|.
T Consensus 25 ~k~~lVTGas~G--IG~~ia~~la~~G~ 50 (281)
T 3v2h_A 25 TKTAVITGSTSG--IGLAIARTLAKAGA 50 (281)
T ss_dssp TCEEEEETCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHCCC
Confidence 579999999884 45566677766664
No 435
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=34.91 E-value=1.1e+02 Score=25.28 Aligned_cols=34 Identities=21% Similarity=0.200 Sum_probs=30.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCC-eEEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP-YEIKI 92 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~-~ev~V 92 (202)
..|..|+.++-|++...+..+.|.+.|+. .|+++
T Consensus 18 ~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~ 52 (262)
T 2ekc_A 18 ALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGF 52 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred eEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECC
Confidence 57999999999999999999999999997 47766
No 436
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=34.87 E-value=1.3e+02 Score=24.66 Aligned_cols=41 Identities=20% Similarity=0.090 Sum_probs=26.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSY 105 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~ 105 (202)
.++++|+|+++ -+...+++.|-+-|. +|.+ ..|.++++.+.
T Consensus 26 ~k~vlVTGas~--gIG~aia~~L~~~G~--~V~~--~~r~~~~~~~~ 66 (297)
T 1xhl_A 26 GKSVIITGSSN--GIGRSAAVIFAKEGA--QVTI--TGRNEDRLEET 66 (297)
T ss_dssp TCEEEETTCSS--HHHHHHHHHHHHTTC--EEEE--EESCHHHHHHH
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEE--EeCCHHHHHHH
Confidence 57899999988 456677777777675 3333 34555544433
No 437
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=34.73 E-value=1.2e+02 Score=24.01 Aligned_cols=60 Identities=17% Similarity=0.204 Sum_probs=37.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCch------------------------HHHHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCK------------------------EALSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~------------------------~l~~~~~~~~~~-- 112 (202)
.++++|+|+++ -+...+++.|.+-|. ++.++ .|.++ .+.+++++..++
T Consensus 12 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 85 (263)
T 3ak4_A 12 GRKAIVTGGSK--GIGAAIARALDKAGA--TVAIA--DLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALG 85 (263)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 57899999998 456677777777775 33333 34443 333444333221
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 86 ~iD~lv~~Ag~~ 97 (263)
T 3ak4_A 86 GFDLLCANAGVS 97 (263)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 579999999964
No 438
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=34.70 E-value=58 Score=25.78 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=27.3
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH 96 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH 96 (202)
..|-+.+- +.=|.++++...|++.|++|+..=+.-+
T Consensus 170 ~~i~ly~~--~~Cp~C~~a~~~L~~~~i~~~~~~i~~~ 205 (241)
T 1nm3_A 170 ESISIFTK--PGCPFCAKAKQLLHDKGLSFEEIILGHD 205 (241)
T ss_dssp CCEEEEEC--SSCHHHHHHHHHHHHHTCCCEEEETTTT
T ss_pred ceEEEEEC--CCChHHHHHHHHHHHcCCceEEEECCCc
Confidence 34656654 4559999999999999999987655543
No 439
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=34.56 E-value=92 Score=26.95 Aligned_cols=80 Identities=10% Similarity=0.023 Sum_probs=57.0
Q ss_pred CeEEEEecCCCCHHHHHHH-HHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHHhhcCceEEEEecCC-cCchhhhhhh
Q 028883 59 PIVGIIMESDLDLPVMNDA-ARTLSDFGVPYEIKILP---PHQNCKEALSYALSAKERGIKIIIVGDGV-EAHLSGVAAA 133 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a-~~~L~~~gi~~ev~V~S---aHRtp~~l~~~~~~~~~~g~~ViIa~AG~-aa~LpgvvA~ 133 (202)
..+++++|.. ++++ .+.+..+|..--+.+.. .|..++...+.+.++ +.+.++|++++.. ...|++.+|+
T Consensus 30 ~V~av~~G~~-----~~~~~~~~a~a~GaDkv~~v~d~~l~~~~~~~~a~~La~~-~~~pd~VL~g~ts~G~~laprlAa 103 (307)
T 1efp_A 30 DVTVLCAGAS-----AKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGL-AGDYSHIAAPATTDAKNVMPRVAA 103 (307)
T ss_dssp CEEEEEEETT-----CHHHHHHHHTSTTEEEEEEEECGGGTTCCHHHHHHHHHHH-HTTCSEEEEESSHHHHHHHHHHHH
T ss_pred CEEEEEECCc-----hHHHHHHHHHhcCCCEEEEecCchhccCCHHHHHHHHHHH-ccCCCEEEEeCCcchhhHHHHHHH
Confidence 4678899965 2333 44555678874455544 367788888888877 6678888888754 4679999999
Q ss_pred ccCCcEEEecC
Q 028883 134 NSQILVIRVPL 144 (202)
Q Consensus 134 ~T~~PVIgVP~ 144 (202)
+...|.+.-=+
T Consensus 104 ~L~~~~vtdv~ 114 (307)
T 1efp_A 104 LLDVMVLSDVS 114 (307)
T ss_dssp HTTCCEEEEES
T ss_pred HhCCCccccEE
Confidence 99999885443
No 440
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=34.42 E-value=1.3e+02 Score=26.07 Aligned_cols=61 Identities=11% Similarity=0.148 Sum_probs=47.2
Q ss_pred CCeEEEEecCCCC-HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhc-CceEEE
Q 028883 58 APIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIII 118 (202)
Q Consensus 58 ~~~V~IimGS~SD-~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViI 118 (202)
+.+..|..|.+.+ .-+.+--.+.++++|+.++.......-+.+++.+.++++.++ .++=|+
T Consensus 34 P~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi~~~~~~lp~~~s~~ell~~I~~lN~d~~v~GIl 96 (285)
T 3p2o_A 34 SCLAVILVGDNPASQTYVKSKAKACEECGIKSLVYHLNENITQNELLALINTLNHDDSVHGIL 96 (285)
T ss_dssp CEEEEEEESCCHHHHHHHHHHHHHHHHHTCEEEEEEECTTCCHHHHHHHHHHHHHCTTCCEEE
T ss_pred CeEEEEEeCCCHHHHHHHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHHhCCCCCCEEE
Confidence 3567777787754 456677788899999999999999988999999999988765 344333
No 441
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=34.35 E-value=1.7e+02 Score=25.85 Aligned_cols=70 Identities=6% Similarity=0.031 Sum_probs=47.6
Q ss_pred eEEEEecCCCC-------------HHHHHHHHHHHHHhC--CCeEEEEEccCCC-chHHHHHHHHHhhcCceEEEEecCC
Q 028883 60 IVGIIMESDLD-------------LPVMNDAARTLSDFG--VPYEIKILPPHQN-CKEALSYALSAKERGIKIIIVGDGV 123 (202)
Q Consensus 60 ~V~IimGS~SD-------------~~v~~~a~~~L~~~g--i~~ev~V~SaHRt-p~~l~~~~~~~~~~g~~ViIa~AG~ 123 (202)
.|.| ..+.|| ++.+.++.+.+++.| +...+....+.|+ |+.+.++++.+.+- ++.|-.+.=.
T Consensus 90 ~v~i-~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l~DT~ 167 (382)
T 2ztj_A 90 GIDL-LFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGLADTV 167 (382)
T ss_dssp EEEE-EECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEEEETT
T ss_pred EEEE-EeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEecCCC
Confidence 4554 457888 677889999999999 7777777778885 67889999988877 7654443333
Q ss_pred cCchhhhh
Q 028883 124 EAHLSGVA 131 (202)
Q Consensus 124 aa~Lpgvv 131 (202)
-...|.-+
T Consensus 168 G~~~P~~~ 175 (382)
T 2ztj_A 168 GVATPRQV 175 (382)
T ss_dssp SCCCHHHH
T ss_pred CCCCHHHH
Confidence 33445443
No 442
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=34.19 E-value=1.5e+02 Score=25.84 Aligned_cols=62 Identities=21% Similarity=0.261 Sum_probs=47.4
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHH-hCCCe---------------------EEEEEccCCCchHHHHHHHHHhhcCceEE
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSD-FGVPY---------------------EIKILPPHQNCKEALSYALSAKERGIKII 117 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~-~gi~~---------------------ev~V~SaHRtp~~l~~~~~~~~~~g~~Vi 117 (202)
.-.++.|+-.+++++.|++--|++ -.++. -+-+++-.+.-+++.+.+++...+|.+|+
T Consensus 228 ~~~~~lGrG~~~~~A~E~ALKlkE~s~i~ae~~~a~E~~HGP~alid~~~pvi~~~~~d~~~~k~~~~~~e~~~rg~~vi 307 (372)
T 3tbf_A 228 EHTIFLGRGLYYPIAIEGALKLKEISYIHAEAYPSGELKHGPLALVDKNMPIVAVVPNDELLDKTLSNLQEVHARGGKLI 307 (372)
T ss_dssp CEEEEEECTTHHHHHHHHHHHHHHHHCCEEEEEEGGGTTTTTTTTCCTTCEEEEEECSSTTHHHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEecCcCHHHHHHHHHHHHHHhCcCcceeeHHHhcCccHhhcCCCCeEEEEecCCchHHHHHHHHHHHHHcCCeEE
Confidence 456999999999999999877776 33431 24566667777888889999999998877
Q ss_pred EEec
Q 028883 118 IVGD 121 (202)
Q Consensus 118 Ia~A 121 (202)
+...
T Consensus 308 ~i~~ 311 (372)
T 3tbf_A 308 LFVD 311 (372)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 6554
No 443
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=34.15 E-value=2e+02 Score=24.27 Aligned_cols=61 Identities=16% Similarity=0.121 Sum_probs=50.0
Q ss_pred HHHhCCCeEEEEEc--cC--CCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEe
Q 028883 81 LSDFGVPYEIKILP--PH--QNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRV 142 (202)
Q Consensus 81 L~~~gi~~ev~V~S--aH--Rtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgV 142 (202)
+++||+.. +.+.+ .. =+|.++.++++..+++++++|+.=...+..+.-.+|-.+..||++.
T Consensus 197 ~~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~~ 261 (294)
T 3hh8_A 197 SKAYGVPS-AYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDRRPMETVSKDSGIPIYSE 261 (294)
T ss_dssp HHHHTCCE-EEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEEETTSCSHHHHHHHHHHCCCEEEE
T ss_pred HHHcCCce-eeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHhCCcEEee
Confidence 46799984 44433 33 3678999999999999999999999999999999999999999964
No 444
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=34.12 E-value=87 Score=26.21 Aligned_cols=51 Identities=8% Similarity=-0.016 Sum_probs=38.5
Q ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcc------CC-CchHHHHHHHHHhhcCceEEEEe
Q 028883 70 DLPVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKIIIVG 120 (202)
Q Consensus 70 D~~v~~~a~~~L~~~gi~~ev~V~Sa------HR-tp~~l~~~~~~~~~~g~~ViIa~ 120 (202)
.+..++++.+.+++.|++++..|... .| .|+.+.++++.+.+-|++.|-.+
T Consensus 118 ~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~l~ 175 (295)
T 1ydn_A 118 SIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVSLG 175 (295)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEEec
Confidence 56777788888899999888666543 34 57999999998888888754444
No 445
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=34.10 E-value=72 Score=26.74 Aligned_cols=62 Identities=10% Similarity=0.114 Sum_probs=50.5
Q ss_pred HHhCCCeEEEEEc----cCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccCCcEEEecC
Q 028883 82 SDFGVPYEIKILP----PHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQILVIRVPL 144 (202)
Q Consensus 82 ~~~gi~~ev~V~S----aHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~~PVIgVP~ 144 (202)
++||+.. +.+.+ .==+|.++.++++..+++++++|+.=...+.-+.-.+|..+..||+.+.+
T Consensus 192 ~~yGl~~-~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~~~~ia~~~g~~v~~l~~ 257 (284)
T 3cx3_A 192 KRFGLNQ-LGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTGVGLKTLNP 257 (284)
T ss_dssp HHTTCCE-EEEECSSTTCCCCSHHHHHHHHHHHHTTCCCEEECSSSCCHHHHHHHSSSSCCEEECCC
T ss_pred HHcCCEE-eeccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCeEEEecC
Confidence 5688873 34442 23578999999999999999999999999999999999999999987644
No 446
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=34.08 E-value=1.6e+02 Score=22.53 Aligned_cols=62 Identities=15% Similarity=0.140 Sum_probs=40.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC-------------CCchHHHHHHHHHhh-cCceEEEEecCCc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH-------------QNCKEALSYALSAKE-RGIKIIIVGDGVE 124 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH-------------Rtp~~l~~~~~~~~~-~g~~ViIa~AG~a 124 (202)
.++++|+|+++ -+....++.|.+-|. ++.+.+-. ..++.+.+++++.+. .+++++|-.||..
T Consensus 2 ~k~vlVtGasg--giG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~ 77 (242)
T 1uay_A 2 ERSALVTGGAS--GLGRAAALALKARGY--RVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVG 77 (242)
T ss_dssp CCEEEEETTTS--HHHHHHHHHHHHHTC--EEEEEESSCCSSSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCEEEEeCCCC--hHHHHHHHHHHHCCC--EEEEEccCccccceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEccccc
Confidence 36789999988 456777777777774 44443321 235667777665522 2579999999864
No 447
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=34.02 E-value=1.8e+02 Score=23.32 Aligned_cols=60 Identities=8% Similarity=0.113 Sum_probs=38.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHH-----------------------HHHHHHhh--cC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEAL-----------------------SYALSAKE--RG 113 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~-----------------------~~~~~~~~--~g 113 (202)
.++++|+|+++ -+...+++.|-+-|. ++.++ .|.++++. +++++..+ .+
T Consensus 9 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (270)
T 1yde_A 9 GKVVVVTGGGR--GIGAGIVRAFVNSGA--RVVIC--DKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGR 82 (270)
T ss_dssp TCEEEEETCSS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999998 456677777777774 44333 35544433 33333322 25
Q ss_pred ceEEEEecCCc
Q 028883 114 IKIIIVGDGVE 124 (202)
Q Consensus 114 ~~ViIa~AG~a 124 (202)
++++|-.||..
T Consensus 83 iD~lv~nAg~~ 93 (270)
T 1yde_A 83 LDCVVNNAGHH 93 (270)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 79999999864
No 448
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=33.96 E-value=1.5e+02 Score=24.22 Aligned_cols=60 Identities=23% Similarity=0.067 Sum_probs=36.1
Q ss_pred CCCCeEEEEecCCC----C----HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEe
Q 028883 56 TDAPIVGIIMESDL----D----LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (202)
Q Consensus 56 ~~~~~V~IimGS~S----D----~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~ 120 (202)
.++.+|.||.||.. + ...++.+.+.|++-|..++ +.-..... .+.+..+..+. +++||.+
T Consensus 23 ~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev~--~~dL~~~~-Dv~~~~~~l~~--aD~iv~~ 90 (218)
T 3rpe_A 23 NAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVK--ITTVDQGY-DIESEIENYLW--ADTIIYQ 90 (218)
T ss_dssp -CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCEE--EEEGGGCC-CHHHHHHHHHH--CSEEEEE
T ss_pred ccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEEE--EEECCCcc-CHHHHHHHHHh--CCEEEEE
Confidence 34468999999983 2 4566778888888777544 44444332 34444555544 5555544
No 449
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=33.75 E-value=1.4e+02 Score=25.13 Aligned_cols=82 Identities=13% Similarity=-0.034 Sum_probs=39.1
Q ss_pred CCeEEEEecCCCC-HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHH------------h--hcCceEEEEecC
Q 028883 58 APIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA------------K--ERGIKIIIVGDG 122 (202)
Q Consensus 58 ~~~V~IimGS~SD-~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~------------~--~~g~~ViIa~AG 122 (202)
.+.|.|.+|+. | ....+++.+.|++.. .+.+-.-+..+..+++.+..+.. . =..++++|+.+|
T Consensus 157 ~~~ILv~~GG~-d~~~l~~~vl~~L~~~~-~i~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDlvI~~gG 234 (282)
T 3hbm_A 157 KYDFFICMGGT-DIKNLSLQIASELPKTK-IISIATSSSNPNLKKLQKFAKLHNNIRLFIDHENIAKLMNESNKLIISAS 234 (282)
T ss_dssp CEEEEEECCSC-CTTCHHHHHHHHSCTTS-CEEEEECTTCTTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEEEEEEESS
T ss_pred CCeEEEEECCC-chhhHHHHHHHHhhcCC-CEEEEECCCchHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCEEEECCc
Confidence 35677777764 5 444555555555433 22222222333334444432210 0 012577777433
Q ss_pred CcCchhhhhhhccCCcEEEecCC
Q 028883 123 VEAHLSGVAAANSQILVIRVPLL 145 (202)
Q Consensus 123 ~aa~LpgvvA~~T~~PVIgVP~~ 145 (202)
..-.=+....+|.|-+|..
T Consensus 235 ----~T~~E~~~~g~P~i~ip~~ 253 (282)
T 3hbm_A 235 ----SLVNEALLLKANFKAICYV 253 (282)
T ss_dssp ----HHHHHHHHTTCCEEEECCS
T ss_pred ----HHHHHHHHcCCCEEEEeCC
Confidence 1222233467788888863
No 450
>1xp2_A EAD500, PLY500, L-alanyl-D-glutamate peptidase; hydrolase; 1.80A {Bacteriophage A500} PDB: 2vo9_A
Probab=33.66 E-value=35 Score=28.11 Aligned_cols=56 Identities=14% Similarity=0.214 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhc-CceEEEEecCCcCchhhhh
Q 028883 74 MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVEAHLSGVA 131 (202)
Q Consensus 74 ~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~-g~~ViIa~AG~aa~Lpgvv 131 (202)
+++..+.+++-|++ +.|.|.+|++++=.++..+...+ |..|.-|-.|.|.|.-|..
T Consensus 41 l~~m~~aA~~~Gi~--l~v~sGyRS~e~Q~~Ly~~g~s~~G~~vt~A~pg~S~H~~G~A 97 (179)
T 1xp2_A 41 TRNVIKKMAKEGIY--LCVAQGYRSTAEQNALYAQGRTKPGAIVTNAKGGQSNHNYGVA 97 (179)
T ss_dssp HHHHHHHHHTTTCC--EEEEECCCCHHHHHHHHHBTTTBSSCCCCSCCTTSSGGGGTCE
T ss_pred HHHHHHHHHHcCCe--EEEEEeecCHHHHHHHHHhhcccCCceeeeCCCCCCCccceeE
Confidence 33444455566775 89999999999999987655332 3223233347777766543
No 451
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=33.63 E-value=74 Score=24.57 Aligned_cols=77 Identities=14% Similarity=0.075 Sum_probs=45.6
Q ss_pred CeEEEEecCCC-------CHHHHHHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHHhhc-CceEEEEecCCc----C
Q 028883 59 PIVGIIMESDL-------DLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKER-GIKIIIVGDGVE----A 125 (202)
Q Consensus 59 ~~V~IimGS~S-------D~~v~~~a~~~L~~~gi~~e-v~V~SaHRtp~~l~~~~~~~~~~-g~~ViIa~AG~a----a 125 (202)
++|+||+=|+. |.. ..-.+..|+++|+... ..++ --.++.+.+.++++.++ ++++||+..|.+ .
T Consensus 2 ~~v~Ii~tGdEl~~G~i~D~n-~~~l~~~l~~~G~~v~~~~iv--~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D 78 (164)
T 2is8_A 2 FRVGILTVSDKGFRGERQDTT-HLAIREVLAGGPFEVAAYELV--PDEPPMIKKVLRLWADREGLDLILTNGGTGLAPRD 78 (164)
T ss_dssp EEEEEEEECHHHHHTSSCCCH-HHHHHHHHTTSSEEEEEEEEE--CSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTC
T ss_pred cEEEEEEEcCcccCCCcccch-HHHHHHHHHHCCCeEeEEEEc--CCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCC
Confidence 46788775443 322 2235667888887533 3333 23456666666666554 689998887764 4
Q ss_pred chhhhhhhccCCc
Q 028883 126 HLSGVAAANSQIL 138 (202)
Q Consensus 126 ~LpgvvA~~T~~P 138 (202)
..+-+++.....+
T Consensus 79 ~t~ea~~~~~~~~ 91 (164)
T 2is8_A 79 RTPEATRELLDRE 91 (164)
T ss_dssp CHHHHHHTTCSEE
T ss_pred ChHHHHHHHhCCC
Confidence 5666666554433
No 452
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=33.61 E-value=1.5e+02 Score=23.45 Aligned_cols=26 Identities=19% Similarity=0.166 Sum_probs=16.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++- +...+++.|-+-|.
T Consensus 4 ~k~vlVTGas~g--IG~~ia~~l~~~G~ 29 (260)
T 1x1t_A 4 GKVAVVTGSTSG--IGLGIATALAAQGA 29 (260)
T ss_dssp TCEEEETTCSSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCcH--HHHHHHHHHHHcCC
Confidence 357777777763 45556666666554
No 453
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=33.58 E-value=1.6e+02 Score=23.61 Aligned_cols=28 Identities=21% Similarity=0.090 Sum_probs=17.9
Q ss_pred CCchHHHHHHHHHhhc--CceEEEEecCCc
Q 028883 97 QNCKEALSYALSAKER--GIKIIIVGDGVE 124 (202)
Q Consensus 97 Rtp~~l~~~~~~~~~~--g~~ViIa~AG~a 124 (202)
..++.+.+++++..++ +++++|-.||..
T Consensus 73 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 102 (262)
T 3ksu_A 73 SNEEEVAKLFDFAEKEFGKVDIAINTVGKV 102 (262)
T ss_dssp CSHHHHHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 3455666666655443 578899888853
No 454
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=33.55 E-value=1e+02 Score=25.11 Aligned_cols=60 Identities=18% Similarity=0.242 Sum_probs=37.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHH------------------------HHHHHHHhh--c
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEA------------------------LSYALSAKE--R 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l------------------------~~~~~~~~~--~ 112 (202)
+++++|+|+.+-+ ...+++.|-+-|. +|.++ .|.++++ .+++++..+ .
T Consensus 29 gk~vlVTGas~gI--G~aia~~la~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 29 GKVAIVTGAGAGI--GLAVARRLADEGC--HVLCA--DIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TCEEEETTTTSTH--HHHHHHHHHHTTC--EEEEE--ESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHH--HHHHHHHHHHCCC--EEEEE--eCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 6899999999865 4556666766675 33332 3444443 333433322 2
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 103 ~iD~lvnnAg~~ 114 (277)
T 3gvc_A 103 GVDKLVANAGVV 114 (277)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 578999988864
No 455
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=33.47 E-value=1.7e+02 Score=22.86 Aligned_cols=33 Identities=9% Similarity=-0.021 Sum_probs=21.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCC-eEEEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP-YEIKIL 93 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~-~ev~V~ 93 (202)
.++++|+|+++ -+....++.|-+.|-. +++.+.
T Consensus 21 ~k~vlITGasg--gIG~~la~~L~~~G~~~~~V~~~ 54 (267)
T 1sny_A 21 MNSILITGCNR--GLGLGLVKALLNLPQPPQHLFTT 54 (267)
T ss_dssp CSEEEESCCSS--HHHHHHHHHHHTSSSCCSEEEEE
T ss_pred CCEEEEECCCC--cHHHHHHHHHHhcCCCCcEEEEE
Confidence 56899999987 4556677777777722 344443
No 456
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=33.47 E-value=1.7e+02 Score=23.23 Aligned_cols=26 Identities=12% Similarity=0.096 Sum_probs=18.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
+++++|+|+++- +...+++.|-+-|.
T Consensus 8 ~k~vlVTGas~G--IG~aia~~la~~G~ 33 (259)
T 3edm_A 8 NRTIVVAGAGRD--IGRACAIRFAQEGA 33 (259)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC
T ss_pred CCEEEEECCCch--HHHHHHHHHHHCCC
Confidence 578888988874 45666666666665
No 457
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=33.37 E-value=1.3e+02 Score=25.83 Aligned_cols=64 Identities=13% Similarity=0.197 Sum_probs=48.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHH-hCCCeE---------------------EEEEccCCCchHHHHHHHHHhhcCceE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSD-FGVPYE---------------------IKILPPHQNCKEALSYALSAKERGIKI 116 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~-~gi~~e---------------------v~V~SaHRtp~~l~~~~~~~~~~g~~V 116 (202)
..-.++.|+-.+++++.|++--|++ ..++.+ +-+.+-.++-+++.+.+++...+|.+|
T Consensus 204 ~~~~~~lG~G~~~~~A~E~ALKlkE~~~i~ae~~~~~E~~HGP~alv~~~~~vi~~~~~~~~~~~~~~~~~e~~~~g~~v 283 (334)
T 3hba_A 204 VKNLVVLGRGFGYAVSKEIALKLKEVCAIHAEAFSSAEFLHGPVTLVEKKLSILDVCIRDESYGSHVEQIANVKQRGANL 283 (334)
T ss_dssp CCEEEEEECTHHHHHHHHHHHHHHHHHCCEEEEEETTTCC-----------CEEEEECCSTTHHHHHHHHHHHHHTTCCE
T ss_pred CCeEEEEeCCcCHHHHHHHHHHHHHHcCcceEEecHHhhccchHHhcCCCceEEEEecCchhHHHHHHHHHHHHHcCCeE
Confidence 3577899999999999999877776 456422 345666677788888889898999888
Q ss_pred EEEecC
Q 028883 117 IIVGDG 122 (202)
Q Consensus 117 iIa~AG 122 (202)
++....
T Consensus 284 ~~i~~~ 289 (334)
T 3hba_A 284 IHLHQT 289 (334)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 776543
No 458
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=33.32 E-value=1.2e+02 Score=23.72 Aligned_cols=114 Identities=7% Similarity=-0.088 Sum_probs=59.1
Q ss_pred CeEEEEe----cCCCC---HHHHHHHHHHHHHhCCCeEEE-EEccCCCchHHHHHHHHHhh--cCceEEEEecCCcCchh
Q 028883 59 PIVGIIM----ESDLD---LPVMNDAARTLSDFGVPYEIK-ILPPHQNCKEALSYALSAKE--RGIKIIIVGDGVEAHLS 128 (202)
Q Consensus 59 ~~V~Iim----GS~SD---~~v~~~a~~~L~~~gi~~ev~-V~SaHRtp~~l~~~~~~~~~--~g~~ViIa~AG~aa~Lp 128 (202)
.+|+++. |.... ..-.+...+.|++.|+++++. +....-+++...+.++++-. ...+.|++.... ++
T Consensus 136 ~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ai~~~~d~--a~- 212 (304)
T 3gbv_A 136 REIVIFRKIHEGVIGSNQQESREIGFRQYMQEHHPACNILELNLHADLNIEDSRMLDDFFREHPDVKHGITFNSK--VY- 212 (304)
T ss_dssp SEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHCTTSEEEEEEEESSCSSCHHHHHHHHHHHCTTCCEEEESSSC--TH-
T ss_pred CeEEEEEecccCCccchhHHHHHHHHHHHHHhhCCCcEEEEeeecCCCHHHHHHHHHHHHHhCCCeEEEEEcCcc--hH-
Confidence 6899999 43333 334555677788899887643 33333344433333333322 247899988766 33
Q ss_pred hhhhhcc-----CCcEEEecCCCCCCChhhH-HHhhcCCCCCeeeEEecCChhhHHHHHHHHH
Q 028883 129 GVAAANS-----QILVIRVPLLSEDWSEDDV-INSIRMPSHVQVASVPRNNAKNAALYAVKVL 185 (202)
Q Consensus 129 gvvA~~T-----~~PVIgVP~~~~~l~G~DL-lS~vqMP~GvpVatV~I~n~~NAAl~Aa~IL 185 (202)
|++.++. .+.|||+ ++... ...++ +|+-.+||..+ .+.-|..|+++|
T Consensus 213 g~~~al~~~g~~di~vig~-------d~~~~~~~~~~--~~~~~~tv~~~-~~~~g~~av~~l 265 (304)
T 3gbv_A 213 IIGEYLQQRRKSDFSLIGY-------DLLERNVTCLK--EGTVSFLIAQQ-PELQGFNSIKTL 265 (304)
T ss_dssp HHHHHHHHTTCCSCEEEEE-------SCCHHHHHHHH--HTSEEEEEECC-HHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCcEEEEe-------CCCHHHHHHHH--cCceEEEEEeC-HHHHHHHHHHHH
Confidence 4555543 3344442 23332 33443 44433377544 444445555443
No 459
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=33.31 E-value=1.5e+02 Score=24.06 Aligned_cols=81 Identities=11% Similarity=-0.029 Sum_probs=0.0
Q ss_pred CeEEEEecCCCCHHH--HHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhhhhhccC
Q 028883 59 PIVGIIMESDLDLPV--MNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGVAAANSQ 136 (202)
Q Consensus 59 ~~V~IimGS~SD~~v--~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~T~ 136 (202)
.+|++|. ++.+... .+...+.|++.|++. +...............+++..+.+.++|++......+..-+-+....
T Consensus 140 ~~ia~i~-~~~~~g~~~~~~~~~~l~~~g~~v-~~~~~~~~~~~d~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~ 217 (368)
T 4eyg_A 140 KKVATLT-SDYAPGNDALAFFKERFTAGGGEI-VEEIKVPLANPDFAPFLQRMKDAKPDAMFVFVPAGQGGNFMKQFAER 217 (368)
T ss_dssp CEEEEEE-ESSHHHHHHHHHHHHHHHHTTCEE-EEEEEECSSSCCCHHHHHHHHHHCCSEEEEECCTTCHHHHHHHHHHT
T ss_pred CEEEEEe-cCchHhHHHHHHHHHHHHHcCCEE-EEEEeCCCCCCcHHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHHc
Q ss_pred ------CcEEE
Q 028883 137 ------ILVIR 141 (202)
Q Consensus 137 ------~PVIg 141 (202)
+|+++
T Consensus 218 g~~~~~v~~~~ 228 (368)
T 4eyg_A 218 GLDKSGIKVIG 228 (368)
T ss_dssp TGGGTTCEEEE
T ss_pred CCCcCCceEEe
No 460
>3g23_A Peptidase U61, LD-carboxypeptidase A; flavodoxin-like fold, catalytic triad, merops S66 unassigned peptidases family; HET: MSE; 1.89A {Novosphingobium aromaticivorans}
Probab=33.22 E-value=71 Score=27.12 Aligned_cols=81 Identities=7% Similarity=-0.012 Sum_probs=53.0
Q ss_pred CeEEEEecCC-CCHHHHHHHHHHHHH--hCCCeEEEEEc-cCC-------C-chHHHHHHHHHhhcCceEEEEecCCcCc
Q 028883 59 PIVGIIMESD-LDLPVMNDAARTLSD--FGVPYEIKILP-PHQ-------N-CKEALSYALSAKERGIKIIIVGDGVEAH 126 (202)
Q Consensus 59 ~~V~IimGS~-SD~~v~~~a~~~L~~--~gi~~ev~V~S-aHR-------t-p~~l~~~~~~~~~~g~~ViIa~AG~aa~ 126 (202)
.+|+||+=|. -|.+..+.+.+.|+. +|. ++.+.. +.+ + -+|..++.+-+.+..+++|+++-|+.+.
T Consensus 4 ~~I~ivaPSs~~~~~~~~~~~~~l~~~~~G~--~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGGyga 81 (274)
T 3g23_A 4 RRIAICAPSTPFTREDSARVIALAAAEFPDL--SLSFHEQCFASEGHFAGSDALRLSAFLECANDDAFEAVWFVRGGYGA 81 (274)
T ss_dssp EEEEEECSSSCCCHHHHHHHHHHHHHHCTTE--EEEECGGGGCCSSSSSSCHHHHHHHHHHHHTCTTCSEEEESCCSSCT
T ss_pred CEEEEEeCCCCCCHHHHHHHHHHHHhccCCe--EEEECcchhhccCccCCCHHHHHHHHHHHhhCCCCCEEEEeeccccH
Confidence 4689997444 466777788888887 575 444421 111 1 2577788777777788999999998664
Q ss_pred ---hhhh----hhhccCCcEEE
Q 028883 127 ---LSGV----AAANSQILVIR 141 (202)
Q Consensus 127 ---Lpgv----vA~~T~~PVIg 141 (202)
||-. +....+++.+|
T Consensus 82 ~rlL~~lD~~~i~~~~PK~~~G 103 (274)
T 3g23_A 82 NRIAEDALARLGRAASAKQYLG 103 (274)
T ss_dssp HHHHHHHHTTCCGGGGGCEEEE
T ss_pred HHHHHhhhhhhhhhhCCcEEEE
Confidence 3433 22234677777
No 461
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=33.21 E-value=80 Score=27.18 Aligned_cols=29 Identities=7% Similarity=-0.002 Sum_probs=21.6
Q ss_pred CeEEEEecCCCCH-H----HHHHHHHHH-HHhCCC
Q 028883 59 PIVGIIMESDLDL-P----VMNDAARTL-SDFGVP 87 (202)
Q Consensus 59 ~~V~IimGS~SD~-~----v~~~a~~~L-~~~gi~ 87 (202)
.+|+|++|+.|-. + .+..+.+.| ++-|..
T Consensus 4 ~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~ 38 (377)
T 1ehi_A 4 KRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYE 38 (377)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEE
T ss_pred cEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcE
Confidence 4799999999884 3 366677778 777754
No 462
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=32.98 E-value=1.3e+02 Score=24.58 Aligned_cols=40 Identities=20% Similarity=0.118 Sum_probs=25.0
Q ss_pred HHHHHHhhcCceEEEEecCCcCchhhhhhh-ccCCcEEEec
Q 028883 104 SYALSAKERGIKIIIVGDGVEAHLSGVAAA-NSQILVIRVP 143 (202)
Q Consensus 104 ~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~-~T~~PVIgVP 143 (202)
++.+..++...++|++..+....+++.+++ ....|+|..-
T Consensus 77 ~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~ 117 (384)
T 1vgv_A 77 GLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVE 117 (384)
T ss_dssp HHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEES
T ss_pred HHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEe
Confidence 333444445679999876544556655544 5678998754
No 463
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=32.97 E-value=1.7e+02 Score=24.51 Aligned_cols=46 Identities=9% Similarity=-0.042 Sum_probs=29.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc-------cCCCchHHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP-------PHQNCKEALSYALS 108 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S-------aHRtp~~l~~~~~~ 108 (202)
+++++|+|+++ -+...+++.|-+-|. +|.+.. .-|.++++.+..++
T Consensus 9 gk~~lVTGas~--GIG~~~a~~La~~Ga--~Vv~~~~~~~~~~~~R~~~~~~~~~~~ 61 (319)
T 1gz6_A 9 GRVVLVTGAGG--GLGRAYALAFAERGA--LVVVNDLGGDFKGVGKGSSAADKVVEE 61 (319)
T ss_dssp TCEEEETTTTS--HHHHHHHHHHHHTTC--EEEEECCCBCTTSCBCCSHHHHHHHHH
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEcCCcccccccCCHHHHHHHHHH
Confidence 57999999987 556777888877775 455442 24555555544433
No 464
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=32.89 E-value=91 Score=24.48 Aligned_cols=30 Identities=7% Similarity=0.001 Sum_probs=19.7
Q ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 55 STDAPIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 55 ~~~~~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
...+.++.+|+|+++- +....++.|-+-|.
T Consensus 9 ~~~~~k~vlITGas~g--iG~~ia~~l~~~G~ 38 (256)
T 3ezl_A 9 MVMSQRIAYVTGGMGG--IGTSICQRLHKDGF 38 (256)
T ss_dssp ----CEEEEETTTTSH--HHHHHHHHHHHTTE
T ss_pred CCCCCCEEEEECCCCh--HHHHHHHHHHHCCC
Confidence 3344789999999884 55677777777664
No 465
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=32.84 E-value=1.7e+02 Score=23.57 Aligned_cols=26 Identities=12% Similarity=0.107 Sum_probs=19.7
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++ -+...+++.|-+-|.
T Consensus 23 ~k~~lVTGas~--gIG~aia~~L~~~G~ 48 (288)
T 2x9g_A 23 APAAVVTGAAK--RIGRAIAVKLHQTGY 48 (288)
T ss_dssp CCEEEETTCSS--HHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCC--HHHHHHHHHHHHCCC
Confidence 57899999997 456667777777774
No 466
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=32.81 E-value=1.7e+02 Score=23.47 Aligned_cols=46 Identities=13% Similarity=0.187 Sum_probs=31.2
Q ss_pred HHHHHHhCCCeEEEEEccCCCc-hHHHHHHHHHhhcCceEEEEecCC
Q 028883 78 ARTLSDFGVPYEIKILPPHQNC-KEALSYALSAKERGIKIIIVGDGV 123 (202)
Q Consensus 78 ~~~L~~~gi~~ev~V~SaHRtp-~~l~~~~~~~~~~g~~ViIa~AG~ 123 (202)
.+.+.++|+.+-+-..|=+|.| +++.++++.+.+.|.++++.+.-.
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~ 121 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNI 121 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSS
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 4556677776443323333665 578888888888899999998654
No 467
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=32.74 E-value=2e+02 Score=23.29 Aligned_cols=32 Identities=6% Similarity=0.034 Sum_probs=22.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP 94 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S 94 (202)
+++++|+|+.+ -+...+++.|-+-|. +|.+++
T Consensus 31 gk~~lVTGas~--GIG~aia~~la~~G~--~V~~~~ 62 (273)
T 3uf0_A 31 GRTAVVTGAGS--GIGRAIAHGYARAGA--HVLAWG 62 (273)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEE
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC--EEEEEc
Confidence 68999999998 456677777777775 444443
No 468
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=32.63 E-value=1.2e+02 Score=24.54 Aligned_cols=62 Identities=10% Similarity=0.089 Sum_probs=38.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCc--------------------------hHHHHHHHHHhhc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNC--------------------------KEALSYALSAKER 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp--------------------------~~l~~~~~~~~~~ 112 (202)
+++++|+|++|.--+...+++.|-+-|. +|.++ .|.+ +.+.+++++..++
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGA--QLAFT--YATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTC--EEEEE--ESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCC--EEEEE--eCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5789999998434466777777777774 34333 2332 3344444443322
Q ss_pred --CceEEEEecCCc
Q 028883 113 --GIKIIIVGDGVE 124 (202)
Q Consensus 113 --g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 97 ~g~iD~lv~~Ag~~ 110 (285)
T 2p91_A 97 WGSLDIIVHSIAYA 110 (285)
T ss_dssp TSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 579999999865
No 469
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=32.55 E-value=1.8e+02 Score=23.05 Aligned_cols=77 Identities=16% Similarity=0.180 Sum_probs=46.4
Q ss_pred CCCeEEEEecCCC-------CHHHHHHHHHHHHH---hCCCeE-EEEEccCCCchHHHHHHHHHhh-cCceEEEEecCCc
Q 028883 57 DAPIVGIIMESDL-------DLPVMNDAARTLSD---FGVPYE-IKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVE 124 (202)
Q Consensus 57 ~~~~V~IimGS~S-------D~~v~~~a~~~L~~---~gi~~e-v~V~SaHRtp~~l~~~~~~~~~-~g~~ViIa~AG~a 124 (202)
.+++|+||+=|+. |..- .-.+..|++ +|+... ..++ --.++.+.+.++++.+ .++++||+..|.+
T Consensus 13 ~~~rv~IistGdEl~~g~~~D~n~-~~L~~~L~~~~~~G~~v~~~~iv--~Dd~~~I~~al~~a~~~~~~DlVIttGGtg 89 (189)
T 1jlj_A 13 HQIRVGVLTVSDSCFRNLAEDRSG-INLKDLVQDPSLLGGTISAYKIV--PDEIEEIKETLIDWCDEKELNLILTTGGTG 89 (189)
T ss_dssp CCCEEEEEEECHHHHTTSSCCHHH-HHHHHHHHCTTTTCCEEEEEEEE--CSCHHHHHHHHHHHHHTSCCSEEEEESCCS
T ss_pred CCCEEEEEEECCccCCCcccchHH-HHHHHHHhchhcCCcEEEEEEEe--CCCHHHHHHHHHHHhhcCCCCEEEEcCCCC
Confidence 4578999876543 5432 335666777 787543 2333 2345666666666544 3589998887764
Q ss_pred ----CchhhhhhhccC
Q 028883 125 ----AHLSGVAAANSQ 136 (202)
Q Consensus 125 ----a~LpgvvA~~T~ 136 (202)
...+-+++....
T Consensus 90 ~g~~D~t~eal~~~~~ 105 (189)
T 1jlj_A 90 FAPRDVTPEATKEVIE 105 (189)
T ss_dssp SSTTCCHHHHHHHHCS
T ss_pred CCCcccHHHHHHHHhc
Confidence 445666665443
No 470
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=32.51 E-value=87 Score=27.21 Aligned_cols=63 Identities=16% Similarity=0.160 Sum_probs=0.0
Q ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhh
Q 028883 57 DAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSG 129 (202)
Q Consensus 57 ~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpg 129 (202)
....|.||=.|.. +.+.++..|...|....+.|+ ||..+.+.++. +.++++|++.|...-+..
T Consensus 157 ~gk~vvVvG~s~i---VG~p~A~lL~~~g~~atVtv~--h~~t~~L~~~~-----~~ADIVI~Avg~p~~I~~ 219 (281)
T 2c2x_A 157 AGAHVVVIGRGVT---VGRPLGLLLTRRSENATVTLC--HTGTRDLPALT-----RQADIVVAAVGVAHLLTA 219 (281)
T ss_dssp TTCEEEEECCCTT---THHHHHHHHTSTTTCCEEEEE--CTTCSCHHHHH-----TTCSEEEECSCCTTCBCG
T ss_pred CCCEEEEECCCcH---HHHHHHHHHhcCCCCCEEEEE--ECchhHHHHHH-----hhCCEEEECCCCCcccCH
No 471
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=32.37 E-value=1.3e+02 Score=23.35 Aligned_cols=59 Identities=10% Similarity=0.114 Sum_probs=37.6
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCch--------------HHHHHHHHHhhcCceEEEEecCCcC
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCK--------------EALSYALSAKERGIKIIIVGDGVEA 125 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~--------------~l~~~~~~~~~~g~~ViIa~AG~aa 125 (202)
++++|+|+++ -+...+++.|.+-|. +|.+++ |.++ .+.+++++. ..+++++|-.||...
T Consensus 2 k~vlVTGas~--gIG~~~a~~l~~~G~--~V~~~~--r~~~~~~~~~~~Dl~~~~~v~~~~~~~-~~~id~lv~~Ag~~~ 74 (257)
T 1fjh_A 2 SIIVISGCAT--GIGAATRKVLEAAGH--QIVGID--IRDAEVIADLSTAEGRKQAIADVLAKC-SKGMDGLVLCAGLGP 74 (257)
T ss_dssp CEEEEETTTS--HHHHHHHHHHHHTTC--EEEEEE--SSSSSEECCTTSHHHHHHHHHHHHTTC-TTCCSEEEECCCCCT
T ss_pred CEEEEeCCCC--HHHHHHHHHHHHCCC--EEEEEe--CCchhhccccccCCCCHHHHHHHHHHh-CCCCCEEEECCCCCC
Confidence 4789999998 567788888888885 444443 4332 233333221 124699999999754
No 472
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=32.34 E-value=1.5e+02 Score=24.55 Aligned_cols=51 Identities=10% Similarity=0.075 Sum_probs=29.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCC--eEEEEEccCC--------CchHHHHHHHHHhh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVP--YEIKILPPHQ--------NCKEALSYALSAKE 111 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~--~ev~V~SaHR--------tp~~l~~~~~~~~~ 111 (202)
|.++-++| .+.+...++++.+++.|.. .|+.+.|++. .|+.+.++++...+
T Consensus 95 p~~~~i~g--~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~ 155 (311)
T 1jub_A 95 PIFFSIAG--MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFT 155 (311)
T ss_dssp CCEEEECC--SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTT
T ss_pred CEEEEcCC--CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHH
Confidence 44444444 4566667777777777765 5666655542 55566666655543
No 473
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=32.25 E-value=1.9e+02 Score=24.00 Aligned_cols=72 Identities=18% Similarity=0.208 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHh-CCCeEEEEEccCCCchHHHHHHHHHhhcC-ceEEEEec------------------------CC
Q 028883 70 DLPVMNDAARTLSDF-GVPYEIKILPPHQNCKEALSYALSAKERG-IKIIIVGD------------------------GV 123 (202)
Q Consensus 70 D~~v~~~a~~~L~~~-gi~~ev~V~SaHRtp~~l~~~~~~~~~~g-~~ViIa~A------------------------G~ 123 (202)
|.+...+..+.+++- ++|.-+++..-. +++.+.++++.+++.| ++.|++.. |.
T Consensus 144 ~~~~~~~ii~~vr~~~~~Pv~vK~~~~~-~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~ 222 (314)
T 2e6f_A 144 DFEAMRTYLQQVSLAYGLPFGVKMPPYF-DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGL 222 (314)
T ss_dssp SHHHHHHHHHHHHHHHCSCEEEEECCCC-CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCC-CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCcc
Q ss_pred cC--------chhhhhhhcc-CCcEEEe
Q 028883 124 EA--------HLSGVAAANS-QILVIRV 142 (202)
Q Consensus 124 aa--------~LpgvvA~~T-~~PVIgV 142 (202)
++ .+---+...+ .+|||++
T Consensus 223 sg~~~~p~~~~~i~~v~~~~~~ipvi~~ 250 (314)
T 2e6f_A 223 GGKYILPTALANVNAFYRRCPDKLVFGC 250 (314)
T ss_dssp ESGGGHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CcccccHHHHHHHHHHHHhcCCCCEEEE
No 474
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=32.24 E-value=1.8e+02 Score=22.94 Aligned_cols=40 Identities=10% Similarity=0.120 Sum_probs=24.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALS 104 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~ 104 (202)
.++++|+|+++ -+...+++.|.+-|. +|.++ .|.++++.+
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~--~V~~~--~r~~~~~~~ 46 (260)
T 2z1n_A 7 GKLAVVTAGSS--GLGFASALELARNGA--RLLLF--SRNREKLEA 46 (260)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHH
T ss_pred CCEEEEECCCc--hHHHHHHHHHHHCCC--EEEEE--eCCHHHHHH
Confidence 46888999887 455666666766664 33332 345444433
No 475
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A*
Probab=32.24 E-value=22 Score=33.36 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=34.1
Q ss_pred ccCCCchHHHHHHHHHhhcCceEEEEecCCcCchhhh--hhh-----ccCCcEEEecCCC
Q 028883 94 PPHQNCKEALSYALSAKERGIKIIIVGDGVEAHLSGV--AAA-----NSQILVIRVPLLS 146 (202)
Q Consensus 94 SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv--vA~-----~T~~PVIgVP~~~ 146 (202)
+--|.+...++.++.+++.+++.+|++-|- +.+-|. ++- ...+||||||-.-
T Consensus 170 GTsR~~~~~~~i~~~l~~~~Id~LvvIGGd-gS~~~A~~L~e~~~~~g~~i~vVGIPkTI 228 (487)
T 2hig_A 170 GSSRGPQDPKEMVDTLERLGVNILFTVGGD-GTQRGALVISQEAKRRGVDISVFGVPKTI 228 (487)
T ss_dssp CCCCSCCCHHHHHHHHHHHTCSEEEEEECH-HHHHHHHHHHHHHHHHTCCCEEEEEECCT
T ss_pred ccCCCCCCHHHHHHHHHHcCCCEEEEeCCC-chHHHHHHHHHHHHHhCCCceEEeccccc
Confidence 334555566788888889899988877554 333322 221 1368999999763
No 476
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=32.23 E-value=93 Score=27.40 Aligned_cols=52 Identities=19% Similarity=0.220 Sum_probs=40.9
Q ss_pred CCHHHHHHHHHHHHHhCCCe------------------E-EEEEccCCCchHHHHHHHHHhhcCceEEEEe
Q 028883 69 LDLPVMNDAARTLSDFGVPY------------------E-IKILPPHQNCKEALSYALSAKERGIKIIIVG 120 (202)
Q Consensus 69 SD~~v~~~a~~~L~~~gi~~------------------e-v~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~ 120 (202)
-|+.-+.+-...|+++||.. + ..|-+..-+++.+.++++++.++|++||+=+
T Consensus 47 G~~~gi~~~LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 117 (475)
T 2z1k_A 47 GTLWGVAEKLPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDG 117 (475)
T ss_dssp CCHHHHHHTHHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCHHHHHHHhHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 46777777778999999951 1 3555666789999999999999999998743
No 477
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=32.15 E-value=1.6e+02 Score=28.70 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=50.2
Q ss_pred eEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEE------ccCC---CchHHHHHHHHHhhcCceEEEEecCCcCchhhh
Q 028883 60 IVGIIMESDLDLPVMNDAARTLSDFGVPYEIKIL------PPHQ---NCKEALSYALSAKERGIKIIIVGDGVEAHLSGV 130 (202)
Q Consensus 60 ~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~------SaHR---tp~~l~~~~~~~~~~g~~ViIa~AG~aa~Lpgv 130 (202)
.|-| ..|.+|+..+++..+.+.+.|..++..++ +++| +|+.+.++++.+.+-|++.|-.+.=.-..+|--
T Consensus 213 ~irI-f~s~n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~ 291 (718)
T 3bg3_A 213 VFRV-FDSLNYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTA 291 (718)
T ss_dssp EEEE-ECSSCCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHH
T ss_pred EEEE-EecHHHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHH
Confidence 3444 46889999999999999999977665443 4577 589999999999888987544433222333444
Q ss_pred h
Q 028883 131 A 131 (202)
Q Consensus 131 v 131 (202)
+
T Consensus 292 v 292 (718)
T 3bg3_A 292 C 292 (718)
T ss_dssp H
T ss_pred H
Confidence 3
No 478
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=31.98 E-value=63 Score=26.38 Aligned_cols=78 Identities=12% Similarity=0.111 Sum_probs=52.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc---cCCCchHHHHHHHHH-hhcCceEEEEecCC-cCchhhhhhh
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP---PHQNCKEALSYALSA-KERGIKIIIVGDGV-EAHLSGVAAA 133 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S---aHRtp~~l~~~~~~~-~~~g~~ViIa~AG~-aa~LpgvvA~ 133 (202)
..++|++|+. ++++.+.+-.+|..--+.+.. .|..++...+.+.++ ++.+.++|++++-. ...|++.+|+
T Consensus 38 ~v~av~~G~~-----~~~~~~~~~~~Gad~v~~v~~~~~~~~~~~~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa 112 (217)
T 3ih5_A 38 QLEAVVAGTG-----LKEIEKQILPYGVDKLHVFDAEGLYPYTSLPHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSS 112 (217)
T ss_dssp CEEEEEEESC-----CTTTHHHHGGGTCSEEEEEECGGGSSCCHHHHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHH
T ss_pred eEEEEEECCC-----HHHHHHHHHhcCCCEEEEecCcccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHH
Confidence 4688999975 244455566789986566654 366777766655554 33456788877644 3568889999
Q ss_pred ccCCcEEE
Q 028883 134 NSQILVIR 141 (202)
Q Consensus 134 ~T~~PVIg 141 (202)
....|.+.
T Consensus 113 ~L~~~~~s 120 (217)
T 3ih5_A 113 ALTSGLTA 120 (217)
T ss_dssp HTTCCCBC
T ss_pred HhCCCccc
Confidence 88888753
No 479
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=31.94 E-value=1.2e+02 Score=24.25 Aligned_cols=43 Identities=7% Similarity=0.066 Sum_probs=26.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYAL 107 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~ 107 (202)
.++++|+|+++- +...+++.|-+-|.. |.+ ..|.++++.+..+
T Consensus 8 ~k~~lVTGas~G--IG~aia~~l~~~G~~--V~~--~~r~~~~~~~~~~ 50 (265)
T 3lf2_A 8 EAVAVVTGGSSG--IGLATVELLLEAGAA--VAF--CARDGERLRAAES 50 (265)
T ss_dssp TCEEEEETCSSH--HHHHHHHHHHHTTCE--EEE--EESCHHHHHHHHH
T ss_pred CCEEEEeCCCCh--HHHHHHHHHHHCCCE--EEE--EeCCHHHHHHHHH
Confidence 578999999884 556667777666652 222 3455555444433
No 480
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=31.91 E-value=1.6e+02 Score=22.05 Aligned_cols=50 Identities=24% Similarity=0.258 Sum_probs=30.8
Q ss_pred CCHHHHHHHHHHHHHh-CCCeEEEEEccCC---------------------CchH--HHHHHHHHhhcCceEEE
Q 028883 69 LDLPVMNDAARTLSDF-GVPYEIKILPPHQ---------------------NCKE--ALSYALSAKERGIKIII 118 (202)
Q Consensus 69 SD~~v~~~a~~~L~~~-gi~~ev~V~SaHR---------------------tp~~--l~~~~~~~~~~g~~ViI 118 (202)
.+...+++..+.++++ |+...+.+...|. ++++ +.++.+.+++.|.++.|
T Consensus 107 ~n~~~~~~~~~~~~~~~g~~~~~~l~~~~p~g~~~~~~l~~~y~~~~~~~~~~e~~~l~~~~~~~~~~g~~~~i 180 (182)
T 3can_A 107 ADEKNIKLSAEFLASLPRHPEIINLLPYHDIGKGKHAKLGSIYNPKGYKMQTPSEEVQQQCIQILTDYGLKATI 180 (182)
T ss_dssp CSHHHHHHHHHHHHHSSSCCSEEEEEECCC------------------CCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHhCcCccceEEEecCcccCHHHHHHhCCcCcccCCCCCCHHHHHHHHHHHHHHHcCCceEe
Confidence 4567777888888887 7622333333222 1244 77777777777777766
No 481
>1wdv_A Hypothetical protein APE2540; structural genomics, unknown function, riken structural genomics/proteomics initiative, RSGI; 1.70A {Aeropyrum pernix} SCOP: d.116.1.1
Probab=31.89 E-value=40 Score=25.18 Aligned_cols=47 Identities=15% Similarity=0.215 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhCCCeEEEEEccC-CCchHHHHHHHHHhhcCceEEEEe
Q 028883 74 MNDAARTLSDFGVPYEIKILPPH-QNCKEALSYALSAKERGIKIIIVG 120 (202)
Q Consensus 74 ~~~a~~~L~~~gi~~ev~V~SaH-Rtp~~l~~~~~~~~~~g~~ViIa~ 120 (202)
.+++.+.|++.||+|+..-...- +|-+++.++..--.++-+|-++.-
T Consensus 2 ~~~~~~~L~~~~i~~~~~~~p~~~~t~~~~a~~lg~~~~~~~Ktlv~~ 49 (152)
T 1wdv_A 2 LEKVEEWIKARGLTWRLLIMQKPTRTVAEAAALLGVSESEIVKTLIVL 49 (152)
T ss_dssp -CHHHHHHHHHTCCCEEEECSSCCSSHHHHHHHHTSCGGGBEEEEEEE
T ss_pred HHHHHHHHHHCCCCcEEEEcCCCCCCHHHHHHHcCCCHHHeEEEEEEE
Confidence 46788999999999998765555 677777666544344445655554
No 482
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=31.87 E-value=1e+02 Score=28.10 Aligned_cols=58 Identities=10% Similarity=0.076 Sum_probs=41.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHh----------h---cCceEEEEecCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAK----------E---RGIKIIIVGDGV 123 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~----------~---~g~~ViIa~AG~ 123 (202)
++.++|+|+ + ...+.++..|.+.|. ++.|+ -|++++..+++++.. . ..++++|-.||.
T Consensus 364 ~k~vlV~Ga-G--Gig~aia~~L~~~G~--~V~i~--~R~~~~a~~la~~~~~~~~~~~dl~~~~~~~~DilVN~agv 434 (523)
T 2o7s_A 364 SKTVVVIGA-G--GAGKALAYGAKEKGA--KVVIA--NRTYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSM 434 (523)
T ss_dssp --CEEEECC-S--HHHHHHHHHHHHHCC---CEEE--ESSHHHHHHHHHHTTC-CEETTTTTTC--CCSEEEEECSST
T ss_pred CCEEEEECC-c--HHHHHHHHHHHHCCC--EEEEE--ECCHHHHHHHHHHcCCceeeHHHhhhccccCceEEEECCCC
Confidence 457888998 4 899999999999996 45554 699999988876541 1 125888888874
No 483
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=31.78 E-value=27 Score=28.08 Aligned_cols=39 Identities=8% Similarity=0.175 Sum_probs=22.2
Q ss_pred HHHHHHHhhcCceEEEE-ecCCcCchhhhhhhccCCcEEEe
Q 028883 103 LSYALSAKERGIKIIIV-GDGVEAHLSGVAAANSQILVIRV 142 (202)
Q Consensus 103 ~~~~~~~~~~g~~ViIa-~AG~aa~LpgvvA~~T~~PVIgV 142 (202)
.+.++.+++.|+++|+. +-.++..+ --+...+..|||++
T Consensus 63 ~~~~~~L~~~g~d~iviaCnTa~~~~-~~l~~~~~iPvi~i 102 (226)
T 2zsk_A 63 INAAKALERAGAELIAFAANTPHLVF-DDVQREVNVPMVSI 102 (226)
T ss_dssp HHHHHHHHHHTCSEEEESSSGGGGGH-HHHHHHCSSCBCCH
T ss_pred HHHHHHHHHcCCCEEEECCCcHHHHH-HHHHHhCCCCEecc
Confidence 33445556677874444 43344444 34555678888884
No 484
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=31.50 E-value=1.9e+02 Score=23.44 Aligned_cols=66 Identities=9% Similarity=0.043 Sum_probs=45.5
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEecCCcC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGDGVEA 125 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~AG~aa 125 (202)
.+|+||.-.+.....+++..+.+++.|+....... .-.........+++....+.++||.......
T Consensus 131 ~~vaii~~~d~~~~~~~~~~~~~~~~g~~v~~~~~-~~~~~~d~~~~l~~i~~~~~~vIv~~~~~~~ 196 (389)
T 4gpa_A 131 NCFVFLYDTDRGYSILQAIMEKAGQNGWHVSAICV-ENFNDVSYRQLLEELDRRQEKKFVIDCEIER 196 (389)
T ss_dssp CEEEEEECSTTCSHHHHHHHHHHHTTTCEEEEEEC-TTCCHHHHHHHHHHHHHHTCCEEEEECCHHH
T ss_pred cEEEEEEecchhhHHHHHHHHHHHhcCceEEEEee-cCCcchhHHHHHHHhhccCCcEEEEEechhH
Confidence 57999998887788888888888888886554332 2233445566667777777787777655443
No 485
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=31.41 E-value=1.8e+02 Score=22.42 Aligned_cols=76 Identities=13% Similarity=0.108 Sum_probs=46.0
Q ss_pred CCCeEEEEecCCC-----CHHHHHHHHHHHHHhCCCeE-EEEEccCCCchHHHHHHHHHhh-cCceEEEEecCCc----C
Q 028883 57 DAPIVGIIMESDL-----DLPVMNDAARTLSDFGVPYE-IKILPPHQNCKEALSYALSAKE-RGIKIIIVGDGVE----A 125 (202)
Q Consensus 57 ~~~~V~IimGS~S-----D~~v~~~a~~~L~~~gi~~e-v~V~SaHRtp~~l~~~~~~~~~-~g~~ViIa~AG~a----a 125 (202)
.+++|+||+=|+. |..- .-.+..|+++|+... ..++. -.++.+.+-++++.+ .++++||+..|.+ .
T Consensus 12 ~~~rv~Ii~tGdElg~i~Dsn~-~~l~~~L~~~G~~v~~~~iv~--Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D 88 (169)
T 1y5e_A 12 KEVRCKIVTISDTRTEETDKSG-QLLHELLKEAGHKVTSYEIVK--DDKESIQQAVLAGYHKEDVDVVLTNGGTGITKRD 88 (169)
T ss_dssp CCCEEEEEEECSSCCTTTCHHH-HHHHHHHHHHTCEEEEEEEEC--SSHHHHHHHHHHHHTCTTCSEEEEECCCSSSTTC
T ss_pred cCCEEEEEEEcCccCeeccChH-HHHHHHHHHCCCeEeEEEEeC--CCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCC
Confidence 3478999885543 4332 335677889998643 33432 345666666666544 2589988877764 3
Q ss_pred chhhhhhhcc
Q 028883 126 HLSGVAAANS 135 (202)
Q Consensus 126 ~LpgvvA~~T 135 (202)
..+-+++...
T Consensus 89 ~t~ea~~~~~ 98 (169)
T 1y5e_A 89 VTIEAVSALL 98 (169)
T ss_dssp CHHHHHHTTC
T ss_pred CcHHHHHHHc
Confidence 4556665443
No 486
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=31.40 E-value=1.9e+02 Score=22.72 Aligned_cols=26 Identities=12% Similarity=0.068 Sum_probs=18.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++ -+...+++.|-+-|.
T Consensus 7 ~k~vlVTGas~--gIG~~ia~~l~~~G~ 32 (249)
T 2ew8_A 7 DKLAVITGGAN--GIGRAIAERFAVEGA 32 (249)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 46889999887 455667777766664
No 487
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=31.31 E-value=1.9e+02 Score=22.75 Aligned_cols=65 Identities=18% Similarity=0.026 Sum_probs=39.0
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc--------------------------cCCCchHHHHHHHHHhhc
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP--------------------------PHQNCKEALSYALSAKER 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S--------------------------aHRtp~~l~~~~~~~~~~ 112 (202)
.++++|+|+++.--+...+++.|-+-|.. +.+++ =-..++.+.+++++..++
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGAR--LIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCE--EEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCE--EEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 57889999886534556666666666653 22221 113445556666555432
Q ss_pred --CceEEEEecCCcC
Q 028883 113 --GIKIIIVGDGVEA 125 (202)
Q Consensus 113 --g~~ViIa~AG~aa 125 (202)
.++++|-.||...
T Consensus 85 ~g~id~li~~Ag~~~ 99 (266)
T 3oig_A 85 VGVIHGIAHCIAFAN 99 (266)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred hCCeeEEEEcccccc
Confidence 4688888888653
No 488
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=31.13 E-value=2.1e+02 Score=23.32 Aligned_cols=45 Identities=20% Similarity=0.169 Sum_probs=33.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHH
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSA 109 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~ 109 (202)
++.++|+|+.+ .+...++..|.+.|. ++.++ .|++++..++.++.
T Consensus 119 gk~vlVtGaaG--GiG~aia~~L~~~G~--~V~i~--~R~~~~~~~l~~~~ 163 (287)
T 1lu9_A 119 GKKAVVLAGTG--PVGMRSAALLAGEGA--EVVLC--GRKLDKAQAAADSV 163 (287)
T ss_dssp TCEEEEETCSS--HHHHHHHHHHHHTTC--EEEEE--ESSHHHHHHHHHHH
T ss_pred CCEEEEECCCc--HHHHHHHHHHHHCcC--EEEEE--ECCHHHHHHHHHHH
Confidence 57889999776 567788888888886 45554 58888887776544
No 489
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=31.03 E-value=1.4e+02 Score=23.61 Aligned_cols=62 Identities=16% Similarity=0.133 Sum_probs=39.4
Q ss_pred CCCCCeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCch----------------HHHHHHHHHhhcCceEEE
Q 028883 55 STDAPIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCK----------------EALSYALSAKERGIKIII 118 (202)
Q Consensus 55 ~~~~~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~----------------~l~~~~~~~~~~g~~ViI 118 (202)
..-..++++|+|+++ -+....++.|-+-|. ++.++ .|.++ .+.++.+... +++++|
T Consensus 15 ~~~~~k~vlVTGas~--gIG~~~a~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~iD~lv 86 (249)
T 1o5i_A 15 LGIRDKGVLVLAASR--GIGRAVADVLSQEGA--EVTIC--ARNEELLKRSGHRYVVCDLRKDLDLLFEKVK--EVDILV 86 (249)
T ss_dssp -CCTTCEEEEESCSS--HHHHHHHHHHHHTTC--EEEEE--ESCHHHHHHTCSEEEECCTTTCHHHHHHHSC--CCSEEE
T ss_pred hccCCCEEEEECCCC--HHHHHHHHHHHHCCC--EEEEE--cCCHHHHHhhCCeEEEeeHHHHHHHHHHHhc--CCCEEE
Confidence 334468999999998 556777777877775 44333 34432 3344444332 589999
Q ss_pred EecCCc
Q 028883 119 VGDGVE 124 (202)
Q Consensus 119 a~AG~a 124 (202)
-.||..
T Consensus 87 ~~Ag~~ 92 (249)
T 1o5i_A 87 LNAGGP 92 (249)
T ss_dssp ECCCCC
T ss_pred ECCCCC
Confidence 999854
No 490
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=31.03 E-value=1.6e+02 Score=23.44 Aligned_cols=26 Identities=15% Similarity=0.093 Sum_probs=17.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++ -+...+++.|-+-|.
T Consensus 11 ~k~~lVTGas~--gIG~~ia~~l~~~G~ 36 (276)
T 1mxh_A 11 CPAAVITGGAR--RIGHSIAVRLHQQGF 36 (276)
T ss_dssp CCEEEETTCSS--HHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCC
Confidence 46788888887 455666666666664
No 491
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=31.03 E-value=1.9e+02 Score=23.12 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=30.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEc-cCCCchHHHHHHHHHhhcCceEEEE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILP-PHQNCKEALSYALSAKERGIKIIIV 119 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~S-aHRtp~~l~~~~~~~~~~g~~ViIa 119 (202)
.++++|+|+.+- +...+++.|-+-|. .+.++. .-|..+++.+..++.+..+.++.+.
T Consensus 11 ~k~vlVTGas~G--IG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (262)
T 3ksu_A 11 NKVIVIAGGIKN--LGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQGAKVALY 68 (262)
T ss_dssp TCEEEEETCSSH--HHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCEEEEECCCch--HHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhcCCcEEEE
Confidence 456777777664 34555555555554 333322 2344556666666555555554443
No 492
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=31.00 E-value=1.4e+02 Score=24.82 Aligned_cols=51 Identities=12% Similarity=0.085 Sum_probs=36.3
Q ss_pred CHHHHHHHHHHHHH-hCCCeEEEEEccCCCchHHHHHHHHHhhcCceEEEEec
Q 028883 70 DLPVMNDAARTLSD-FGVPYEIKILPPHQNCKEALSYALSAKERGIKIIIVGD 121 (202)
Q Consensus 70 D~~v~~~a~~~L~~-~gi~~ev~V~SaHRtp~~l~~~~~~~~~~g~~ViIa~A 121 (202)
|.+...+..+.+++ .++|.-+++.. .-+.+.+.++++.+++.|++.|++..
T Consensus 142 ~~e~~~~iv~~vr~~~~~Pv~vKi~~-~~~~~~~~~~a~~~~~~G~d~i~v~~ 193 (311)
T 1jub_A 142 DFEATEKLLKEVFTFFTKPLGVKLPP-YFDLVHFDIMAEILNQFPLTYVNSVN 193 (311)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEECC-CCSHHHHHHHHHHHTTSCCCEEEECC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECC-CCCHHHHHHHHHHHHHcCCcEEEecC
Confidence 55555555555554 58888888753 34677888889999998998777653
No 493
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=30.93 E-value=1.3e+02 Score=24.20 Aligned_cols=62 Identities=11% Similarity=0.035 Sum_probs=38.4
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccC--------------------CCchHHHHHHHHHhhc--CceE
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPH--------------------QNCKEALSYALSAKER--GIKI 116 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH--------------------Rtp~~l~~~~~~~~~~--g~~V 116 (202)
+++++|+|+++- +...+++.|-+-|.. |.+++-. ..++.+.+++++..++ ++++
T Consensus 27 ~k~vlVTGas~g--IG~aia~~l~~~G~~--V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 102 (260)
T 3gem_A 27 SAPILITGASQR--VGLHCALRLLEHGHR--VIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRA 102 (260)
T ss_dssp CCCEEESSTTSH--HHHHHHHHHHHTTCC--EEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCCE--EEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 578999999984 567777778777753 3333211 1233344445444332 4789
Q ss_pred EEEecCCc
Q 028883 117 IIVGDGVE 124 (202)
Q Consensus 117 iIa~AG~a 124 (202)
+|-.||..
T Consensus 103 lv~nAg~~ 110 (260)
T 3gem_A 103 VVHNASEW 110 (260)
T ss_dssp EEECCCCC
T ss_pred EEECCCcc
Confidence 99998853
No 494
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=30.78 E-value=1.9e+02 Score=22.51 Aligned_cols=60 Identities=17% Similarity=0.189 Sum_probs=36.8
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCC------------------------chHHHHHHHHHhhc--
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQN------------------------CKEALSYALSAKER-- 112 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRt------------------------p~~l~~~~~~~~~~-- 112 (202)
.++++|+|+++- +....++.|-+-|. ++.++ .|. ++.+.+++++..++
T Consensus 12 ~k~vlVTGasgg--iG~~~a~~l~~~G~--~V~~~--~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (265)
T 2o23_A 12 GLVAVITGGASG--LGLATAERLVGQGA--SAVLL--DLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFG 85 (265)
T ss_dssp TCEEEEETTTSH--HHHHHHHHHHHTTC--EEEEE--ECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCh--HHHHHHHHHHHCCC--EEEEE--eCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 578999999874 46677777777674 33332 233 33444444443322
Q ss_pred CceEEEEecCCc
Q 028883 113 GIKIIIVGDGVE 124 (202)
Q Consensus 113 g~~ViIa~AG~a 124 (202)
+++++|-.||..
T Consensus 86 ~id~li~~Ag~~ 97 (265)
T 2o23_A 86 RVDVAVNCAGIA 97 (265)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCccC
Confidence 578999888864
No 495
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=30.76 E-value=1.2e+02 Score=26.25 Aligned_cols=53 Identities=9% Similarity=-0.085 Sum_probs=43.5
Q ss_pred CeEEEEecCCCC-HHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhhc
Q 028883 59 PIVGIIMESDLD-LPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKER 112 (202)
Q Consensus 59 ~~V~IimGS~SD-~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~~ 112 (202)
.+..|..|.+.+ .-+.+--.+.++++|+ ++..-....-+.+++.+.++++.++
T Consensus 29 ~Lavilvg~dpaS~~Yv~~k~k~~~~~Gi-~~~~~lp~~~s~~ell~~I~~lN~D 82 (276)
T 3ngx_A 29 SLKLIQIGDNEAASIYARAKIRRGKKIGI-AVDLEKYDDISMKDLLKRIDDLAKD 82 (276)
T ss_dssp EEEEEEESCCHHHHHHHHHHHHHHHHHTC-EEEEEEESSCCHHHHHHHHHHHHHC
T ss_pred cEEEEEeCCCHHHHHHHHHHHHHHHHCCe-EEEEECCCCCCHHHHHHHHHHHcCC
Confidence 467777777654 4567777888999999 9999999999999999999988765
No 496
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=30.75 E-value=1.6e+02 Score=21.77 Aligned_cols=54 Identities=20% Similarity=0.298 Sum_probs=41.7
Q ss_pred EEEEecCCCCHHHHHHHHHHHHHhCCCeEEEEEccCCCchHHHHHHHHHhh--cCceEEEEecC
Q 028883 61 VGIIMESDLDLPVMNDAARTLSDFGVPYEIKILPPHQNCKEALSYALSAKE--RGIKIIIVGDG 122 (202)
Q Consensus 61 V~IimGS~SD~~v~~~a~~~L~~~gi~~ev~V~SaHRtp~~l~~~~~~~~~--~g~~ViIa~AG 122 (202)
|.|| +.|....++|.+..++-+. |++- -++-+++.+|++++.+ ..++|+|-+..
T Consensus 5 vlii---sndkklieearkmaekanl--elrt---vktedelkkyleefrkesqnikvlilvsn 60 (110)
T 2kpo_A 5 VLII---SNDKKLIEEARKMAEKANL--ELRT---VKTEDELKKYLEEFRKESQNIKVLILVSN 60 (110)
T ss_dssp EEEE---CSCHHHHHHHHHHHHHHTC--EEEE---CCSHHHHHHHHHHHTSSTTSEEEEEEESS
T ss_pred EEEE---cCcHHHHHHHHHHHHhcCc--eeee---eccHHHHHHHHHHHHhhccCeEEEEEEcC
Confidence 5555 3689999999999999887 5553 3789999999999865 34688887653
No 497
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=30.75 E-value=1.3e+02 Score=24.04 Aligned_cols=26 Identities=12% Similarity=-0.000 Sum_probs=19.2
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++- +....++.|-+-|.
T Consensus 5 ~k~vlVTGas~g--IG~~~a~~l~~~G~ 30 (281)
T 3m1a_A 5 AKVWLVTGASSG--FGRAIAEAAVAAGD 30 (281)
T ss_dssp CCEEEETTTTSH--HHHHHHHHHHHTTC
T ss_pred CcEEEEECCCCh--HHHHHHHHHHHCCC
Confidence 578999999984 45567777777774
No 498
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=30.74 E-value=2.1e+02 Score=22.98 Aligned_cols=25 Identities=12% Similarity=0.139 Sum_probs=16.1
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFG 85 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~g 85 (202)
.++++|+|+++- +....++.|-+-|
T Consensus 44 ~k~vlITGasgg--IG~~la~~L~~~G 68 (285)
T 2c07_A 44 NKVALVTGAGRG--IGREIAKMLAKSV 68 (285)
T ss_dssp SCEEEEESTTSH--HHHHHHHHHTTTS
T ss_pred CCEEEEECCCcH--HHHHHHHHHHHcC
Confidence 578899999874 3445555554444
No 499
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=30.67 E-value=1.7e+02 Score=24.96 Aligned_cols=73 Identities=10% Similarity=0.102 Sum_probs=49.9
Q ss_pred eEEEEecCCCCH--------------HHHHHHHHHHHHhCCCeEEEEEcc------CC-CchHHHHHHHHHhhcCceEEE
Q 028883 60 IVGIIMESDLDL--------------PVMNDAARTLSDFGVPYEIKILPP------HQ-NCKEALSYALSAKERGIKIII 118 (202)
Q Consensus 60 ~V~IimGS~SD~--------------~v~~~a~~~L~~~gi~~ev~V~Sa------HR-tp~~l~~~~~~~~~~g~~ViI 118 (202)
.|.|. .+.||. +.++++.+.+++.|..++..++-. .| .|+.+.++++.+.+-|++.|.
T Consensus 97 ~v~i~-~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 175 (307)
T 1ydo_A 97 EACVF-MSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELS 175 (307)
T ss_dssp EEEEE-EESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCSCEE
T ss_pred EEEEE-eecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 45544 588885 667888888889999887777654 23 578999999999888887554
Q ss_pred EecCCcCchhhhhhh
Q 028883 119 VGDGVEAHLSGVAAA 133 (202)
Q Consensus 119 a~AG~aa~LpgvvA~ 133 (202)
.+.=.-...|.-+..
T Consensus 176 l~DT~G~~~P~~v~~ 190 (307)
T 1ydo_A 176 LGDTIGAANPAQVET 190 (307)
T ss_dssp EECSSCCCCHHHHHH
T ss_pred EcCCCCCcCHHHHHH
Confidence 443222345655433
No 500
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=30.64 E-value=1.4e+02 Score=24.19 Aligned_cols=26 Identities=12% Similarity=-0.003 Sum_probs=19.6
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHHHhCC
Q 028883 59 PIVGIIMESDLDLPVMNDAARTLSDFGV 86 (202)
Q Consensus 59 ~~V~IimGS~SD~~v~~~a~~~L~~~gi 86 (202)
.++++|+|+++- +...+++.|-+-|.
T Consensus 9 ~k~vlVTGas~G--IG~aia~~l~~~G~ 34 (285)
T 3sc4_A 9 GKTMFISGGSRG--IGLAIAKRVAADGA 34 (285)
T ss_dssp TCEEEEESCSSH--HHHHHHHHHHTTTC
T ss_pred CCEEEEECCCCH--HHHHHHHHHHHCCC
Confidence 579999999885 55667777777675
Done!