BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028885
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B4RF90|DHMA_PHEZH Haloalkane dehalogenase OS=Phenylobacterium zucineum (strain HLK1)
GN=dhmA PE=3 SV=1
Length = 301
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
++A HR + DL+G+G SDKP D+ YT+ + ++ + + V A+ C
Sbjct: 69 LVAAGHRAIAPDLVGFGRSDKPA-----DRGDYTYARHVAWMSAWLEAVDLRGAYLFCQD 123
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISL 88
GGL+GL+ PE G+++ N L
Sbjct: 124 WGGLIGLRLVAAYPERFAGVVVSNTGL 150
>sp|B0SY51|DHMA_CAUSK Haloalkane dehalogenase OS=Caulobacter sp. (strain K31) GN=dhmA
PE=3 SV=1
Length = 302
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
A+ HRV + DLIG+G SDKP R YT+E + ++ + + + C G
Sbjct: 71 ARGHRVIAPDLIGFGRSDKPAARG-----DYTYERHVAWMSAWLEGLDLRGLTLFCQDWG 125
Query: 64 GLVGLQAAVMEPEICRGMILLNISL 88
GL+GL+ PE G+++ N L
Sbjct: 126 GLIGLRLVAAFPERFAGLVIANTGL 150
>sp|Q9A919|DHMA_CAUCR Haloalkane dehalogenase OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=dhmA PE=3 SV=1
Length = 302
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPR-DF-FDKPFYTFETWASQLNDFCKDVVKDQAFFIC 59
++AK HRV + DL+G+G SDKP R D+ +++ W Q ND KD+V C
Sbjct: 69 LVAKGHRVVAPDLVGFGRSDKPAKRTDYTYERHVAWMSAWLEQ-NDL-KDIV-----LFC 121
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISL 88
GGL+GL+ PE +++ N L
Sbjct: 122 QDWGGLIGLRLVAAFPERFSAVVVSNTGL 150
>sp|B8H3S9|DHMA_CAUCN Haloalkane dehalogenase OS=Caulobacter crescentus (strain NA1000 /
CB15N) GN=dhmA PE=3 SV=1
Length = 302
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPR-DF-FDKPFYTFETWASQLNDFCKDVVKDQAFFIC 59
++AK HRV + DL+G+G SDKP R D+ +++ W Q ND KD+V C
Sbjct: 69 LVAKGHRVVAPDLVGFGRSDKPAKRTDYTYERHVAWMSAWLEQ-NDL-KDIV-----LFC 121
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISL 88
GGL+GL+ PE +++ N L
Sbjct: 122 QDWGGLIGLRLVAAFPERFSAVVVSNTGL 150
>sp|P19076|DMPD_PSEUF 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas sp. (strain
CF600) GN=dmpD PE=3 SV=1
Length = 283
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LAKS RV + D++G+GYS++P Y + W + +QA + NS
Sbjct: 55 LAKSRRVIAPDMLGFGYSERPADAQ------YNRDVWVDHAVGVLDALEIEQADLVGNSF 108
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GG + L A+ PE R ++L+
Sbjct: 109 GGGIALALAIRHPERVRRLVLMG 131
>sp|O07015|RSBQ_BACSU Sigma factor SigB regulation protein RsbQ OS=Bacillus subtilis
(strain 168) GN=rsbQ PE=1 SV=1
Length = 269
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 5 KSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGG 64
+ HRV D +G G+SD R + + T + +A + D C+ + + F+ +S+G
Sbjct: 43 EDHRVILFDYVGSGHSDL---RAYDLNRYQTLDGYAQDVLDVCEALDLKETVFVGHSVGA 99
Query: 65 LVGLQAAVMEPEICRGMILLNIS 87
L+G+ A++ PE+ ++++ S
Sbjct: 100 LIGMLASIRRPELFSHLVMVGPS 122
>sp|P23133|TODF_PSEP1 2-hydroxy-6-oxo-2,4-heptadienoate hydrolase OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=todF PE=3 SV=2
Length = 276
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L++ RV + D++G+G++ +P+ Y E+W + L + D+ + NS
Sbjct: 53 LSRHRRVIAPDMVGFGFTQRPH------GIHYGVESWVAHLAGILDALELDRVDLVGNSF 106
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GG + L A+ P R ++L+
Sbjct: 107 GGALSLAFAIRFPHRVRRLVLMG 129
>sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF OS=Bacillus subtilis (strain 168)
GN=yugF PE=3 SV=1
Length = 273
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+L + + ++DL +G S+K R F YT++ A + + + QA + +S
Sbjct: 49 LLRDKYDIIALDLPPFGQSEKS--RTFI----YTYQNLAKLVIGILEHLQVKQAVLVGHS 102
Query: 62 IGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAG--KL 119
+GG + L AA+ +PE+ ++LL S L RS ++ T L
Sbjct: 103 MGGQISLSAALQKPELFSKVVLLCSSGY-------------LKRSHPTIIFGTHIPYFHL 149
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLETGAADVFLEFICYSGGPL-PE 178
+ K + E V L +D S + EE+++ +P + FI + G L PE
Sbjct: 150 YIKRWLSKEGVMKNLLNVVHDKSLIDEEMIDGYGRPFQDEQIFKAMTRFIRHREGDLEPE 209
Query: 179 EL 180
+L
Sbjct: 210 QL 211
>sp|B1KM44|BIOH_SHEWM Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Shewanella
woodyi (strain ATCC 51908 / MS32) GN=bioH PE=3 SV=1
Length = 256
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 19/99 (19%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFICNSIG 63
+RV+ +DL G+G+SD P D L+D+ ++ + A +I S+G
Sbjct: 39 YRVHYVDLPGFGHSD---PID-------------GDLDDWVDAIINQLPNTAIWIGWSLG 82
Query: 64 GLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRP 102
GLV +AA+ PE RG++ + S + + + W G P
Sbjct: 83 GLVATKAALRYPEQVRGLVTIASSPCFMAREDESWPGIP 121
>sp|P59336|DHAA_RHOSD Haloalkane dehalogenase OS=Rhodococcus sp. (strain TDTM0003)
GN=dhaA PE=1 SV=1
Length = 294
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+A SHR + DLIG G SDKP+ D+F F+ L+ F + + ++ + +
Sbjct: 55 VAPSHRCIAPDLIGMGKSDKPD-LDYF------FDDHVRYLDAFIEALGLEEVVLVIHDW 107
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN 109
G +G A PE +G+ + + + P + R ++F+
Sbjct: 108 GSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRT 154
>sp|P0A3G3|DHAA_RHOSO Haloalkane dehalogenase OS=Rhodococcus sp. GN=dhaA PE=1 SV=1
Length = 293
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+A SHR + DLIG G SDKP+ D+F F+ L+ F + + ++ + +
Sbjct: 55 VAPSHRCIAPDLIGMGKSDKPD-LDYF------FDDHVRYLDAFIEALGLEEVVLVIHDW 107
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN 109
G +G A PE +G+ + + + P + R ++F+
Sbjct: 108 GSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRT 154
>sp|P0A3G2|DHAA_RHORH Haloalkane dehalogenase OS=Rhodococcus rhodochrous GN=dhaA PE=1
SV=1
Length = 293
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+A SHR + DLIG G SDKP+ D+F F+ L+ F + + ++ + +
Sbjct: 55 VAPSHRCIAPDLIGMGKSDKPD-LDYF------FDDHVRYLDAFIEALGLEEVVLVIHDW 107
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN 109
G +G A PE +G+ + + + P + R ++F+
Sbjct: 108 GSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRT 154
>sp|P0A3G4|DHAA_PSEPV Haloalkane dehalogenase OS=Pseudomonas pavonaceae GN=dhaA PE=1 SV=1
Length = 293
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+A SHR + DLIG G SDKP+ D+F F+ L+ F + + ++ + +
Sbjct: 55 VAPSHRCIAPDLIGMGKSDKPD-LDYF------FDDHVRYLDAFIEALGLEEVVLVIHDW 107
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN 109
G +G A PE +G+ + + + P + R ++F+
Sbjct: 108 GSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRT 154
>sp|Q48MQ7|RUTD_PSE14 Putative aminoacrylate hydrolase RutD OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=rutD PE=3 SV=1
Length = 259
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L + H V D G G S P D Y+ A +L + + F+ ++
Sbjct: 35 ALTRDHDVLVYDHAGTGRSPADLPAD------YSIRHMAMELLTLLDSLGIQRCHFMGHA 88
Query: 62 IGGLVGLQAAVMEPEICRGMILLN 85
+GGLVGL+ A++ PE+ + +L+N
Sbjct: 89 LGGLVGLEIALLRPELLQSQVLIN 112
>sp|Q9ZER0|DHAA_MYCSX Haloalkane dehalogenase OS=Mycobacterium sp. (strain GP1) GN=dhaAF
PE=2 SV=1
Length = 307
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
+A SHR + DLIG G SDKP+ FFD L+ F + + ++ + +
Sbjct: 55 VAPSHRCIAPDLIGMGKSDKPDLDYFFDDH-------VRYLDAFIEALGLEEVVLVIHDW 107
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQN 109
G +G A PE +G+ + + + P + R ++F+
Sbjct: 108 GSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEFARETFQAFRT 154
>sp|Q5E8N3|BIOH_VIBF1 Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Vibrio
fischeri (strain ATCC 700601 / ES114) GN=bioH PE=3 SV=1
Length = 257
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 21/108 (19%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD---QAFFIC 59
L++ +RV+++DL GYG+S + DF ++ K V+ +A ++
Sbjct: 36 LSQHYRVHTVDLSGYGHSAELGCADF---------------DEMVKQVLAQAPKKAAWLG 80
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYG-RPLIRS 106
S+GGL+ +AA+ PE +I + S R ++ W G +PL+ S
Sbjct: 81 WSLGGLIATKAALTSPERVSQLITVASSPRF--SAEKGWRGIKPLVLS 126
>sp|B5FFE9|BIOH_VIBFM Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Vibrio
fischeri (strain MJ11) GN=bioH PE=3 SV=1
Length = 257
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 54/108 (50%), Gaps = 21/108 (19%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD---QAFFIC 59
L++ +RV+++DL GYG+S + DF ++ K V+ +A ++
Sbjct: 36 LSQHYRVHTVDLSGYGHSAELGSADF---------------DEMVKQVLAQAPKKAAWLG 80
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYG-RPLIRS 106
S+GGL+ +AA+ PE R L+ ++ ++ W G +PLI S
Sbjct: 81 WSLGGLIATKAALTSPE--RVSQLITVASSPCFSAEKGWRGIKPLILS 126
>sp|P23106|XYLF_PSEPU 2-hydroxymuconate semialdehyde hydrolase OS=Pseudomonas putida
GN=xylF PE=1 SV=1
Length = 281
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 4 AKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIG 63
+++ RV + D++G+GYS++P Y+ W + Q + NS G
Sbjct: 55 SQTRRVIAPDMLGFGYSERPADGK------YSQARWVEHAIGVLDALGIQQGDIVGNSFG 108
Query: 64 GLVGLQAAVMEPEICRGMILL---NISLRMLHIKKQPWYGRPLIRSFQNLL 111
G + L A+ PE R ++L+ +S + + W P + + + LL
Sbjct: 109 GGLALALAIRHPERVRRLVLMGSVGVSFPITAGLETAWGYTPSLANMRRLL 159
>sp|Q664J8|BIOH_YERPS Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=bioH
PE=3 SV=1
Length = 258
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD---QAFFIC 59
LA R++ +DL GYG S +D+ A L D + V + QA ++
Sbjct: 36 LAPHFRLHLVDLPGYGRS-----QDYG----------AMSLADMAERVAQQAPKQALWLG 80
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GGLV Q A+ +PE RG+I ++ S + P ++ FQ+ L +
Sbjct: 81 WSMGGLVASQIALSQPECVRGLITVSSSPCFTARDEWPGIKPEVLAGFQHQLSDD----- 135
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE--TGAADVF 165
F++ V +++ + + +++ + +V + P +E TG ++
Sbjct: 136 FHRTVERFLALQTLGTESSRQDARLLKSVVLQHQMPDVEVLTGGLEIL 183
>sp|B2K5V7|BIOH_YERPB Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Yersinia
pseudotuberculosis serotype IB (strain PB1/+) GN=bioH
PE=3 SV=1
Length = 258
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD---QAFFIC 59
LA R++ +DL GYG S +D+ A L D + V + QA ++
Sbjct: 36 LAPHFRLHLVDLPGYGRS-----QDYG----------AMSLADMAERVAQQAPKQALWLG 80
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GGLV Q A+ +PE RG+I ++ S + P ++ FQ+ L +
Sbjct: 81 WSMGGLVASQIALSQPECVRGLITVSSSPCFTARDEWPGIKPEVLAGFQHQLSDD----- 135
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE--TGAADVF 165
F++ V +++ + + +++ + +V + P +E TG ++
Sbjct: 136 FHRTVERFLALQTLGTESSRQDARLLKSVVLQHQMPDVEVLTGGLEIL 183
>sp|Q1QBB9|DHMA_PSYCK Haloalkane dehalogenase OS=Psychrobacter cryohalolentis (strain K5)
GN=dhmA PE=3 SV=1
Length = 303
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Query: 1 MVLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICN 60
++ A HRV + DL G+G SDKP R YT++ + + + + C
Sbjct: 68 ILTAAGHRVIAPDLPGFGRSDKPASRT-----DYTYQRHVNWMQSVLDQLDLNNITLFCQ 122
Query: 61 SIGGLVGLQAAVMEPE 76
GGL+GL+ P+
Sbjct: 123 DWGGLIGLRLVAENPD 138
>sp|P0A573|Y2734_MYCBO Uncharacterized protein Mb2734 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb2734 PE=3 SV=1
Length = 341
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ V + DL+G+G SDKP + Y+ +A+ + D + ++ + +S+
Sbjct: 60 LAQRFTVIAPDLLGHGQSDKP-------RADYSVAAYANGMRDLLSVLDIERVTIVGHSL 112
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GG V +Q A P++ +IL++
Sbjct: 113 GGGVAMQFAYQFPQLVDRLILVS 135
>sp|P0A572|Y2715_MYCTU Uncharacterized protein Rv2715/MT2788 OS=Mycobacterium tuberculosis
GN=Rv2715 PE=3 SV=1
Length = 341
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ V + DL+G+G SDKP + Y+ +A+ + D + ++ + +S+
Sbjct: 60 LAQRFTVIAPDLLGHGQSDKP-------RADYSVAAYANGMRDLLSVLDIERVTIVGHSL 112
Query: 63 GGLVGLQAAVMEPEICRGMILLN 85
GG V +Q A P++ +IL++
Sbjct: 113 GGGVAMQFAYQFPQLVDRLILVS 135
>sp|A4VQH7|RUTD_PSEU5 Putative aminoacrylate hydrolase RutD OS=Pseudomonas stutzeri
(strain A1501) GN=rutD PE=3 SV=1
Length = 265
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L + +RV D +G S P Y+ E+ A +L + + + FI ++
Sbjct: 35 ALTQDYRVLVYDQLGTNKSPANLPAG------YSIESMAVELLELLDTLGIRRCHFIGHA 88
Query: 62 IGGLVGLQAAVMEPEICRGMILLN 85
+GGLVGLQ A++ P++ + ++ +N
Sbjct: 89 LGGLVGLQIALLRPQLLQSLVPIN 112
>sp|Q01398|DEH1_MORSB Haloacetate dehalogenase H-1 OS=Moraxella sp. (strain B) GN=dehH1
PE=1 SV=1
Length = 294
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
LA+ H V DL GYG SDK P+ D+ Y+F T+A + + ++ + +
Sbjct: 49 LAEHHTVVCADLRGYGDSDK--PKCLPDRSNYSFRTFAHDQLCVMRHLGFERFHLVGHDR 106
Query: 63 GGLVGLQAAVMEPEICRGMILLNI 86
GG G + A+ PE + +++I
Sbjct: 107 GGRTGHRMALDHPEAVLSLTVMDI 130
>sp|B6EPQ0|BIOH_ALISL Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Aliivibrio
salmonicida (strain LFI1238) GN=bioH PE=3 SV=1
Length = 261
Score = 39.3 bits (90), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 20/101 (19%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVK---DQAFFIC 59
L+ +RV+++DL GYGYS + DF ++ V+ +++ ++
Sbjct: 36 LSSQYRVHTVDLSGYGYSAELGSADF---------------DEMVAQVLAQAPEKSAWLG 80
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYG 100
S+GGL+ QAA+ P+ +I + S R ++ W G
Sbjct: 81 WSLGGLIATQAALTAPDRVSQLITVASSPRF--AAEKGWRG 119
>sp|B1JHZ5|BIOH_YERPY Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=bioH
PE=3 SV=1
Length = 258
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD---QAFFIC 59
LA R++ +DL GYG S +D+ A L D + V + QA ++
Sbjct: 36 LAPHFRLHLVDLPGYGRS-----QDYG----------AMSLADMAERVAQQAPKQALWLG 80
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GGLV Q A+ +PE RG+I ++ S + P ++ FQ+ L +
Sbjct: 81 WSMGGLVASQIALSQPECVRGLITVSSSPCFTARDEWPGIKPEVLAGFQHQLSDD----- 135
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158
F++ V +++ + + +++ + +V + P +E
Sbjct: 136 FHRTVERFLALQTLGTESSRQDARLLKSVVLQHQMPDVE 174
>sp|A9R4D0|BIOH_YERPG Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Yersinia
pestis bv. Antiqua (strain Angola) GN=bioH PE=3 SV=1
Length = 258
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD---QAFFIC 59
LA R++ +DL GYG S +D+ A L D + V + QA ++
Sbjct: 36 LAPHFRLHLVDLPGYGRS-----QDYG----------AMSLADMAERVAQQAPKQALWLG 80
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GGLV Q A+ +PE RG+I ++ S + P ++ FQ+ L +
Sbjct: 81 WSMGGLVASQIALSQPECVRGLITVSSSPCFTARDEWPGIKPEVLAGFQHQLSDD----- 135
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158
F++ V +++ + + +++ + +V + P +E
Sbjct: 136 FHRTVERFLALQTLGTESSRQDARLLKSVVLQHQMPDVE 174
>sp|Q74Y45|BIOH_YERPE Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Yersinia
pestis GN=bioH PE=3 SV=2
Length = 258
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD---QAFFIC 59
LA R++ +DL GYG S +D+ A L D + V + QA ++
Sbjct: 36 LAPHFRLHLVDLPGYGRS-----QDYG----------AMSLADMAERVAQQAPKQALWLG 80
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GGLV Q A+ +PE RG+I ++ S + P ++ FQ+ L +
Sbjct: 81 WSMGGLVASQIALSQPECVRGLITVSSSPCFTARDEWPGIKPEVLAGFQHQLSDD----- 135
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158
F++ V +++ + + +++ + +V + P +E
Sbjct: 136 FHRTVERFLALQTLGTESSRQDARLLKSVVLQHQMPDVE 174
>sp|A7FNV8|BIOH_YERP3 Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=bioH PE=3 SV=1
Length = 258
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 23/159 (14%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKD---QAFFIC 59
LA R++ +DL GYG S +D+ A L D + V + QA ++
Sbjct: 36 LAPHFRLHLVDLPGYGRS-----QDYG----------AMSLADMAERVAQQAPKQALWLG 80
Query: 60 NSIGGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKL 119
S+GGLV Q A+ +PE RG+I ++ S + P ++ FQ+ L +
Sbjct: 81 WSMGGLVASQIALSQPECVRGLITVSSSPCFTARDEWPGIKPEVLAGFQHQLSDD----- 135
Query: 120 FYKMVATSESVRNILCQCYNDTSQVTEELVEKILQPGLE 158
F++ V +++ + + +++ + +V + P +E
Sbjct: 136 FHRTVERFLALQTLGTESSRQDARLLKSVVLQHQMPDVE 174
>sp|Q8GHL1|BIOH_SERMA Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Serratia
marcescens GN=bioH PE=1 SV=1
Length = 255
Score = 39.3 bits (90), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L R++ +DL GYG S +Q+ + QA+++ S
Sbjct: 34 ALTPHFRLHLVDLPGYGRSQGFGALSL------------AQMTEIVLAAAPPQAWWLGWS 81
Query: 62 IGGLVGLQAAVMEPEICRGMILLNIS 87
+GGLV QAA+M+P+ G+I + S
Sbjct: 82 LGGLVASQAALMQPQRVSGLITVASS 107
>sp|Q4ZXS0|RUTD_PSEU2 Putative aminoacrylate hydrolase RutD OS=Pseudomonas syringae pv.
syringae (strain B728a) GN=rutD PE=3 SV=1
Length = 259
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
+L + + V D G G S P D Y+ A +L + + F+ ++
Sbjct: 35 LLTRDYHVLVYDHAGTGRSPAVLPAD------YSIRHMAIELLALLDSLDIQRCHFMGHA 88
Query: 62 IGGLVGLQAAVMEPEICRGMILLN 85
+GGLVGL+ A++ PE+ +L+N
Sbjct: 89 LGGLVGLELALLRPELLHSQVLIN 112
>sp|A7MST3|BIOH_VIBHB Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Vibrio
harveyi (strain ATCC BAA-1116 / BB120) GN=bioH PE=3 SV=1
Length = 254
Score = 37.7 bits (86), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 43/93 (46%), Gaps = 14/93 (15%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVG 67
RV+ +DL GYG+S + + D +++ D ++A ++ S+GGLV
Sbjct: 41 RVHVVDLPGYGHSAESHAEDL------------AKIADLVLQDAPEKAVWLGWSLGGLVA 88
Query: 68 LQAAVMEPEICRGMILLNISLRMLHIKKQPWYG 100
A+ P+ +I + S + ++PW G
Sbjct: 89 THIALNAPQRVSKLITVASSPKF--AAERPWRG 119
>sp|A1JMX1|RUTD_YERE8 Putative aminoacrylate hydrolase RutD OS=Yersinia enterocolitica
serotype O:8 / biotype 1B (strain 8081) GN=rutD PE=3
SV=1
Length = 278
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L + RV + D G G S P YT A +L D ++ F+ ++
Sbjct: 35 ALGQHFRVITYDQYGTGRSAGVIPSG------YTLADMADELADLLASQHIERYHFVGHA 88
Query: 62 IGGLVGLQAAVMEPEICRGMILLN 85
+GG++GLQ A+ P+ ++ +N
Sbjct: 89 LGGMIGLQLALSHPQCVERLVAIN 112
>sp|Q9KWQ6|HSAD_RHOSR 4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),
2-diene-4-oate hydrolase OS=Rhodococcus sp. (strain
RHA1) GN=hsaD PE=1 SV=1
Length = 292
Score = 37.7 bits (86), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDV-VKDQAFFICN 60
VLA+ V ++D GYG SDKP + P Y F AS L D + V + + N
Sbjct: 60 VLAEKFHVLAVDQPGYGLSDKPT-----EHPQY-FVHSASALKDLLDTLGVGGRVHLLGN 113
Query: 61 SIGGLVGLQAAVMEPEICRGMILLN 85
S+GG ++ A+ P+ ++L+
Sbjct: 114 SLGGGAAVRFALDYPDRAGRLVLMG 138
>sp|Q9EPB5|SERHL_MOUSE Serine hydrolase-like protein OS=Mus musculus GN=Serhl PE=2 SV=1
Length = 311
Score = 37.4 bits (85), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 9/156 (5%)
Query: 11 SIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVGLQA 70
++D G+G S NP P+Y + + S++ +Q + +S GG VG
Sbjct: 57 AMDFGGHGLSSHYNP----GLPYYQ-QNFVSEVRRVATAFKWNQFTLLGHSFGGCVGGTF 111
Query: 71 AVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRNTAAGKLFYKMVATSESV 130
A M PE+ +ILL+ + L + R+ ++ L+ A+ K + V+ E +
Sbjct: 112 ACMFPEMVDKLILLDSTPFFLDSNEMENILTYRRRNIEHTLQVEASQKKSLRAVSPEEML 171
Query: 131 RNILCQCYNDTSQVTEELVEKILQPGLETGAADVFL 166
+ L N+ S + ++ E ILQ G A + L
Sbjct: 172 QGFL----NNNSHLDKDCGELILQRGTTKVDAGLVL 203
>sp|Q0HPU6|BIOH_SHESR Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Shewanella
sp. (strain MR-7) GN=bioH PE=3 SV=1
Length = 264
Score = 37.4 bits (85), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 13/96 (13%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
+RV+ +DL G+G S +P D TW D + A + S+GGLV
Sbjct: 46 YRVHYVDLPGFGLS-QPIAGDL--------STWV----DALIHALPANAIWAGWSLGGLV 92
Query: 67 GLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRP 102
QAA+ P +G+I + S + +++ W G P
Sbjct: 93 ATQAAIRYPSHIQGLITIASSPCFMAREEEAWPGIP 128
>sp|Q6IE26|EPHX4_MOUSE Epoxide hydrolase 4 OS=Mus musculus GN=Ephx4 PE=2 SV=2
Length = 359
Score = 37.0 bits (84), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
+RV ++DL GYG SD P ++ Y + + + D + + I + GG++
Sbjct: 118 YRVVALDLRGYGESDAPAHQE-----SYKLDCLIADIKDILDSLGYSKCVLIGHDWGGMI 172
Query: 67 GLQAAVMEPEICRGMILLN 85
AV PE+ +I++N
Sbjct: 173 AWLIAVCYPEMIMKLIVIN 191
>sp|A8GCT3|RUTD_SERP5 Putative aminoacrylate hydrolase RutD OS=Serratia proteamaculans
(strain 568) GN=rutD PE=3 SV=1
Length = 267
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L + RV D G S P Y+ A ++ + + D +F+ ++
Sbjct: 35 ALGEHFRVVVYDHFGTARSKGSVPDG------YSMADMADEVAQLLRSLNVDCCYFVGHA 88
Query: 62 IGGLVGLQAAVMEPEICRGMILLN 85
+GG++GLQ A+ P++ ++++N
Sbjct: 89 LGGMIGLQLALTHPQLVEKLVVVN 112
>sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4 OS=Homo sapiens GN=EPHX4 PE=2 SV=2
Length = 362
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
+RV ++DL GYG +D P R Y + + + D + + I + GG++
Sbjct: 120 YRVVALDLRGYGETDAPIHRQ-----NYKLDCLITDIKDILDSLGYSKCVLIGHDWGGMI 174
Query: 67 GLQAAVMEPEICRGMILLN 85
A+ PE+ +I++N
Sbjct: 175 AWLIAICYPEMVMKLIVIN 193
>sp|A1JSF8|BIOH_YERE8 Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=bioH PE=3 SV=1
Length = 258
Score = 36.2 bits (82), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVG 67
R++ +DL GYG S + S++ + QA ++ S+GGLV
Sbjct: 41 RLHLVDLPGYGRSTEFGAMSL------------SEMAEIVLQQAPQQAIWLGWSMGGLVA 88
Query: 68 LQAAVMEPEICRGMILLNIS 87
Q A+ PE RG+I ++ S
Sbjct: 89 SQIALSHPERVRGLITVSSS 108
>sp|A8GKT5|BIOH_SERP5 Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Serratia
proteamaculans (strain 568) GN=bioH PE=3 SV=1
Length = 264
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 12/80 (15%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVG 67
R++ +DL GYG S + F Q+ + D QA+++ S+GGLV
Sbjct: 41 RLHLVDLPGYGRS----------QGFAAMSL--EQMAEIVLDAAPAQAWWLGWSLGGLVA 88
Query: 68 LQAAVMEPEICRGMILLNIS 87
Q A+ +P+ G+I + S
Sbjct: 89 SQIALTQPQRVHGLITVASS 108
>sp|Q6Q2C2|HYES_PIG Bifunctional epoxide hydrolase 2 OS=Sus scrofa GN=EPHX2 PE=2 SV=1
Length = 555
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVG 67
RV ++D+ GYG S P + Y+ E + F + QA FI + GG++
Sbjct: 287 RVLAVDMKGYGESSAPP-----EIEEYSLEVLCKDMVTFLNKLGLSQAVFIGHDWGGVLV 341
Query: 68 LQAAVMEPEICRGMILLN 85
A+ PE R + LN
Sbjct: 342 WNMALFYPERVRAVASLN 359
>sp|C5BGT3|BIOH_EDWI9 Pimelyl-[acyl-carrier protein] methyl ester esterase
OS=Edwardsiella ictaluri (strain 93-146) GN=bioH PE=3
SV=1
Length = 258
Score = 35.8 bits (81), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 12/111 (10%)
Query: 3 LAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSI 62
L+ R++ +DL GYG S P +++ ++A ++ S+
Sbjct: 36 LSAQFRLHLVDLPGYGRSGGDTPYSL------------AEMTQRVLAQAPERALWLGWSL 83
Query: 63 GGLVGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRPLIRSFQNLLRN 113
GGLV QAA+ P+ G+I + S P ++ FQ+ LR+
Sbjct: 84 GGLVATQAALYHPQRVSGLITVASSPCFTAQMAWPGIRSDVLYHFQSQLRD 134
>sp|Q8E8N6|BIOH_SHEON Pimelyl-[acyl-carrier protein] methyl ester esterase OS=Shewanella
oneidensis (strain MR-1) GN=bioH PE=3 SV=2
Length = 263
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 15/97 (15%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFY-TFETWASQLNDFCKDVVKDQAFFICNSIGGL 65
+RV+ +DL G+G S +P TW D + + A + S+GGL
Sbjct: 45 YRVHYVDLPGFGLS----------QPIAGNLSTWI----DALINNLPTNAIWAGWSLGGL 90
Query: 66 VGLQAAVMEPEICRGMILLNISLRMLHIKKQPWYGRP 102
V QAA+ P +G+I + S + +++ W G P
Sbjct: 91 VATQAAIDYPSHIKGLITIASSPCFMAREEEAWPGIP 127
>sp|C7CM33|RUTD_METED Putative aminoacrylate hydrolase RutD OS=Methylobacterium
extorquens (strain DSM 5838 / DM4) GN=rutD PE=3 SV=1
Length = 260
Score = 35.4 bits (80), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
VLA+ RV + D G G S P +P + A + D + A + ++
Sbjct: 37 VLAERFRVVTYDHRGTGRSPGPL------EPGHDIAAMARDVLDLLDHLGIGTADIVGHA 90
Query: 62 IGGLVGLQAAVMEPEICRGMILLN 85
+GGL+ LQ A+ PE ++++N
Sbjct: 91 LGGLIALQLALTHPERVGRIVVIN 114
>sp|P80299|HYES_RAT Bifunctional epoxide hydrolase 2 OS=Rattus norvegicus GN=Ephx2 PE=1
SV=1
Length = 554
Score = 35.4 bits (80), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Query: 8 RVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLVG 67
RV +ID+ GYG S P + Y E ++ F + QA FI + G++
Sbjct: 285 RVLAIDMKGYGDSSSPP-----EIEEYAMELLCEEMVTFLNKLGIPQAVFIGHDWAGVLV 339
Query: 68 LQAAVMEPEICRGMILLNISL 88
A+ PE R + LN L
Sbjct: 340 WNMALFHPERVRAVASLNTPL 360
>sp|P34913|HYES_HUMAN Bifunctional epoxide hydrolase 2 OS=Homo sapiens GN=EPHX2 PE=1 SV=2
Length = 555
Score = 35.4 bits (80), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 7 HRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNSIGGLV 66
+RV ++D+ GYG S P + Y E ++ F + QA FI + GG++
Sbjct: 286 YRVLAMDMKGYGESSAPP-----EIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGML 340
Query: 67 GLQAAVMEPEICRGMILLN 85
A+ PE R + LN
Sbjct: 341 VWYMALFYPERVRAVASLN 359
>sp|B5XXN3|RUTD_KLEP3 Putative aminoacrylate hydrolase RutD OS=Klebsiella pneumoniae
(strain 342) GN=rutD PE=3 SV=1
Length = 266
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L +++ S D G G + P P D Y+ T A +L + + + ++
Sbjct: 35 ALEAQYQLVSYDHNGTGENAGPLPAD------YSMATMAQELLSALQAAGITRFALVGHA 88
Query: 62 IGGLVGLQAAVMEPEICRGMILLN 85
+G L+GLQ A+ PE ++L+N
Sbjct: 89 LGALIGLQLALDRPEAVSALVLVN 112
>sp|D3RKL3|RUTD_KLEVT Putative aminoacrylate hydrolase RutD OS=Klebsiella variicola
(strain At-22) GN=rutD PE=3 SV=1
Length = 266
Score = 35.0 bits (79), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 2 VLAKSHRVYSIDLIGYGYSDKPNPRDFFDKPFYTFETWASQLNDFCKDVVKDQAFFICNS 61
L +++ S D G G + P P D Y+ T A +L + + + ++
Sbjct: 36 ALEAQYQLVSYDHNGTGENAGPLPAD------YSMATMAQELLSALQAAGITRFALVGHA 89
Query: 62 IGGLVGLQAAVMEPEICRGMILLN 85
+G L+GLQ A+ PE ++L+N
Sbjct: 90 LGALIGLQLALDRPEAVSALVLVN 113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.140 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,239,917
Number of Sequences: 539616
Number of extensions: 2940475
Number of successful extensions: 6437
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 6374
Number of HSP's gapped (non-prelim): 84
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)