BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028891
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LK09|SYP32_ARATH Syntaxin-32 OS=Arabidopsis thaliana GN=SYP32 PE=2 SV=1
Length = 347
Score = 269 bits (688), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 154/204 (75%), Positives = 169/204 (82%), Gaps = 10/204 (4%)
Query: 1 MSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPLATRSAAASTSSSPP 60
M TKEFK+VLTMRTEN+KVHESRRQLFSS ASK+S NPFVRQRPLA ++AA + S P
Sbjct: 152 MDTTKEFKDVLTMRTENMKVHESRRQLFSSNASKESTNPFVRQRPLAAKAAA--SESVPL 209
Query: 61 PWANGSPSSS-QLFPRK-QDGESQPLLQQQQHHQQQQHHQQQQQQQMVPLQDSYMQSRAE 118
PWANGS SSS QL P K +GES PLLQQ Q QQQQ QQQMVPLQD+YMQ RAE
Sbjct: 210 PWANGSSSSSSQLVPWKPGEGESSPLLQQSQQQQQQQ------QQQMVPLQDTYMQGRAE 263
Query: 119 ALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNSISS 178
AL VESTIHEL +IF QLAT+VSQQGEIAIRID+NM+DT+ANVEGAQ L +YLNSISS
Sbjct: 264 ALHTVESTIHELSSIFTQLATMVSQQGEIAIRIDQNMEDTLANVEGAQSQLARYLNSISS 323
Query: 179 NRWLMIKIFFVLIFFLMIFLFFVA 202
NRWLM+KIFFVLI FLMIFLFFVA
Sbjct: 324 NRWLMMKIFFVLIAFLMIFLFFVA 347
>sp|Q9FFK1|SYP31_ARATH Syntaxin-31 OS=Arabidopsis thaliana GN=SYP31 PE=1 SV=1
Length = 336
Score = 174 bits (441), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 134/209 (64%), Gaps = 18/209 (8%)
Query: 1 MSATKEFKEVLTMRTENLKVHESRRQLFSSTASKDS-----ANPFVRQRPLATRSAAAST 55
M ATK+ ++VLT R+EN+K HE+R+QLFS+ + DS A P ++ S
Sbjct: 139 MGATKQLQDVLTTRSENMKAHENRKQLFSTKNAVDSPPQNNAKSVPEPPPWSSSSNPFGN 198
Query: 56 SSSP--PPWANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQQHHQQQQQQQMVPLQDSYM 113
P PP G+P SQL R+ E+ P Q + QQ VP Q++Y
Sbjct: 199 LQQPLLPPLNTGAPPGSQL-RRRSAIENAP----------SQQMEMSLLQQTVPKQENYS 247
Query: 114 QSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYL 173
QSRA AL +VES I EL IF QLAT+V+QQGE+AIRID+NMD+++ NVEGA+ ALL++L
Sbjct: 248 QSRAVALHSVESRITELSGIFPQLATMVTQQGELAIRIDDNMDESLVNVEGARSALLQHL 307
Query: 174 NSISSNRWLMIKIFFVLIFFLMIFLFFVA 202
ISSNRWLM+KIF V+I FL++FLFFVA
Sbjct: 308 TRISSNRWLMMKIFAVIILFLIVFLFFVA 336
>sp|Q24509|STX5_DROME Syntaxin-5 OS=Drosophila melanogaster GN=Syx5 PE=2 SV=2
Length = 467
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 96/185 (51%), Gaps = 25/185 (13%)
Query: 2 SATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPLATRSAAASTSSSPPP 61
S + +FK++L +RTENLK ++RR FS PLA + + ST+
Sbjct: 292 SMSTDFKQILEVRTENLKQQKTRRDQFSQGPG-----------PLAAHTVSPSTAKQGSL 340
Query: 62 WANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQQHHQQQQQQQMVPLQDSYMQSRAEALQ 121
S + + ++ PLL Q Q + D+Y+Q RAE +Q
Sbjct: 341 LL--SEENQAVSIDMGSSDTTPLLSTQT------------QMAIYDDSDNYVQQRAETMQ 386
Query: 122 NVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNSISSNRW 181
N+ESTI ELG IF QLA +V +Q EI RID N+ D N+E A G +LKY S+S NRW
Sbjct: 387 NIESTIVELGGIFQQLAHMVKEQEEIVERIDTNVADAELNIEAAHGEILKYFQSVSKNRW 446
Query: 182 LMIKI 186
LMIKI
Sbjct: 447 LMIKI 451
>sp|Q08DB5|STX5_BOVIN Syntaxin-5 OS=Bos taurus GN=STX5 PE=2 SV=1
Length = 355
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 93/185 (50%), Gaps = 32/185 (17%)
Query: 2 SATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPLA-TRSAAASTSSSPP 60
S + +FK VL +RTENLK SRR+ FS V PLA +
Sbjct: 185 SMSNDFKSVLEVRTENLKQQRSRREQFSRAP--------VSALPLAPNHLGGGAVVLGAE 236
Query: 61 PWANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQQHHQQQQQQQMVPLQDSYMQSRAEAL 120
A+G + + R QQ Q++ QDSY+QSRA+ +
Sbjct: 237 SRASGDVAIDMMDSRTS-----------------------QQLQLIDEQDSYIQSRADTM 273
Query: 121 QNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNSISSNR 180
QN+ESTI ELG+IF QLA +V +Q E RIDEN+ +VE A +LKY S++SNR
Sbjct: 274 QNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNR 333
Query: 181 WLMIK 185
WLM+K
Sbjct: 334 WLMVK 338
>sp|Q13190|STX5_HUMAN Syntaxin-5 OS=Homo sapiens GN=STX5 PE=1 SV=2
Length = 355
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 95/189 (50%), Gaps = 40/189 (21%)
Query: 2 SATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPLATRSAAASTSSSPPP 61
S + +FK VL +RTENLK SRR+ FS V PLA P
Sbjct: 185 SMSNDFKSVLEVRTENLKQQRSRREQFSRAP--------VSALPLA-----------PNH 225
Query: 62 WANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQ-----QHHQQQQQQQMVPLQDSYMQSR 116
G+ +L + H + + QQ Q++ QDSY+QSR
Sbjct: 226 LGGGAV----------------VLGAESHASKDVAIDMMDSRTSQQLQLIDEQDSYIQSR 269
Query: 117 AEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNSI 176
A+ +QN+ESTI ELG+IF QLA +V +Q E RIDEN+ +VE A +LKY S+
Sbjct: 270 ADTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSV 329
Query: 177 SSNRWLMIK 185
+SNRWLM+K
Sbjct: 330 TSNRWLMVK 338
>sp|Q08851|STX5_RAT Syntaxin-5 OS=Rattus norvegicus GN=Stx5 PE=1 SV=2
Length = 355
Score = 105 bits (262), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 95/184 (51%), Gaps = 30/184 (16%)
Query: 2 SATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPLATRSAAASTSSSPPP 61
S + +FK VL +RTENLK +RR+ FS V PLA P
Sbjct: 185 SMSNDFKSVLEVRTENLKQQRNRREQFSRAP--------VSALPLA-----------PNN 225
Query: 62 WANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQQHHQQQQQQQMVPLQDSYMQSRAEALQ 121
G P GES+ + + QQ Q++ QDSY+QSRA+ +Q
Sbjct: 226 LGGG--------PIVLGGESRA---SRDVAIDMMDPRTSQQLQLIDEQDSYIQSRADTMQ 274
Query: 122 NVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNSISSNRW 181
N+ESTI ELG+IF QLA +V +Q E RIDEN+ +VE A +LKY S++SNRW
Sbjct: 275 NIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRW 334
Query: 182 LMIK 185
LM+K
Sbjct: 335 LMVK 338
>sp|Q8K1E0|STX5_MOUSE Syntaxin-5 OS=Mus musculus GN=Stx5 PE=1 SV=3
Length = 355
Score = 104 bits (259), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 94/184 (51%), Gaps = 30/184 (16%)
Query: 2 SATKEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPLATRSAAASTSSSPPP 61
S + +FK VL +RTENLK +RR+ FS V PLA + P
Sbjct: 185 SMSNDFKSVLEVRTENLKQQRNRREQFSRAP--------VSALPLAPNNLGGG----PII 232
Query: 62 WANGSPSSSQLFPRKQDGESQPLLQQQQHHQQQQHHQQQQQQQMVPLQDSYMQSRAEALQ 121
S +S + D + QQ Q++ QDSY+QSRA+ +Q
Sbjct: 233 LGAESRASRDVAIDMMDPRTS------------------QQLQLIDEQDSYIQSRADTMQ 274
Query: 122 NVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNSISSNRW 181
N+ESTI ELG+IF QLA +V +Q E RIDEN+ +VE A +LKY S++SNRW
Sbjct: 275 NIESTIVELGSIFQQLAHMVKEQEETIQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRW 334
Query: 182 LMIK 185
LM+K
Sbjct: 335 LMVK 338
>sp|O13644|SED5_SCHPO Integral membrane protein sed5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=sed5 PE=3 SV=1
Length = 309
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 30/196 (15%)
Query: 7 FKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPLATRSAAASTSSSPPPWANGS 66
FK++L +RT+N+K ++R + F +++S + ANP + + + + P P AN
Sbjct: 138 FKDILEIRTQNMKASQNRTEKFVASSSMN-ANPLINS---GNSISPFADYNDPKPEANED 193
Query: 67 PSSSQLFPRKQDGESQPLLQQQQHHQQQQHHQQQQQQQMVPLQ---DSYMQSRAEALQNV 123
S L DG + + +QM L+ D+Y Q R ++QN+
Sbjct: 194 YLSLNL----GDGANT------------------RYEQMALLESQTDTYSQQRMSSIQNI 231
Query: 124 ESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNSISSNRWLM 183
ESTI ELG IF+QLA +VS+Q E RID + DD ++N+ AQ ++K+ +SSNR L+
Sbjct: 232 ESTITELGGIFSQLAQMVSEQRETVQRIDMHTDDIVSNIGSAQREIVKFYERMSSNRALL 291
Query: 184 IKIF-FVLIFFLMIFL 198
KIF V+IFFL+ L
Sbjct: 292 FKIFGIVIIFFLLWVL 307
>sp|Q20797|STX3_CAEEL Putative syntaxin-3 OS=Caenorhabditis elegans GN=syn-3 PE=3 SV=1
Length = 413
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 98/182 (53%), Gaps = 26/182 (14%)
Query: 5 KEFKEVLTMRTENLKVHESRRQLFSSTASKDSANPFVRQRPLATRSAAASTSSSPPPWAN 64
K+++ VL + TE +K ++RR FSS A+ P+ P ++
Sbjct: 240 KDYQSVLEISTETMKAEKNRRDKFSSGAAV----------PMGL-----------PSSSS 278
Query: 65 GSPSSSQLF-PRKQDGESQPLLQQQQHHQQQQHHQQQQQQQMVPLQDSYMQSRAEALQNV 123
G+ S+L +Q G S L Q QQ QQ+ L+ Y Q+R+ + +
Sbjct: 279 GANVRSKLLQDDEQHGSSSIALDMGALSNMQS--QQTMQQRDSSLE--YAQARSNTMATI 334
Query: 124 ESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNSISSNRWLM 183
E +I ELG IF+QLA+LVS+QGE+ RID N++DT N++ A L++YL +IS NRWLM
Sbjct: 335 EGSISELGQIFSQLASLVSEQGEMITRIDSNVEDTALNIDMAHSELVRYLQNISKNRWLM 394
Query: 184 IK 185
I+
Sbjct: 395 IQ 396
>sp|Q01590|SED5_YEAST Integral membrane protein SED5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SED5 PE=1 SV=1
Length = 340
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%)
Query: 112 YMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLK 171
Y+Q R A++ +ESTI E+GN+F QLA++V +QGE+ RID N+DD N+ GAQ LLK
Sbjct: 251 YLQERNRAVETIESTIQEVGNLFQQLASMVQEQGEVIQRIDANVDDIDLNISGAQRELLK 310
Query: 172 YLNSISSNRWLMIK 185
Y + I SNRWL K
Sbjct: 311 YFDRIKSNRWLAAK 324
>sp|Q08144|TLG2_YEAST T-SNARE affecting a late Golgi compartment protein 2
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TLG2 PE=1 SV=1
Length = 397
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 99 QQQQQQMVPLQDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDT 158
Q+QQQ ++Y++ R E + + + E+ IF ++ LV QG I RID N+++T
Sbjct: 233 QRQQQLHDTSAEAYLRERDEEITQLARGVLEVSTIFREMQDLVVDQGTIVDRIDYNLENT 292
Query: 159 MANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMIFLFFV 201
+ ++ A L K + R K+ +L ++ FFV
Sbjct: 293 VVELKSADKELNKATH--YQKRTQKCKVILLLTLCVIALFFFV 333
>sp|O65359|SYP41_ARATH Syntaxin-41 OS=Arabidopsis thaliana GN=SYP41 PE=1 SV=1
Length = 322
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 40/86 (46%)
Query: 116 RAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLKYLNS 175
R + +Q V ++++L I L+ LV QG I RID N+++ VE L K +
Sbjct: 232 REKEIQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQKAERT 291
Query: 176 ISSNRWLMIKIFFVLIFFLMIFLFFV 201
+ V++ F+M+ L +
Sbjct: 292 QRHGGMVKCASVLVILCFIMLLLLIL 317
>sp|Q39233|SYP21_ARATH Syntaxin-21 OS=Arabidopsis thaliana GN=SYP21 PE=1 SV=1
Length = 279
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 92 QQQQHHQQQQQQQMVPLQ------DSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQG 145
QQQ Q ++Q++V L ++ ++ R + ++ +E I ++ +F LA +V+ QG
Sbjct: 162 QQQALLLQSRRQEVVFLDNEITFNEAIIEEREQGIREIEDQIRDVNGMFKDLALMVNHQG 221
Query: 146 EIAIRIDENMDDTMANVEGAQGALLKYLNSISSNRWLMIKIFFVLIF 192
I I N+D++ A A L K + SN L +LIF
Sbjct: 222 NIVDDISSNLDNSHAATTQATVQLRKAAKTQRSNSSLT--CLLILIF 266
>sp|Q12241|VAM3_YEAST Syntaxin VAM3 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=VAM3 PE=1 SV=1
Length = 283
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 114 QSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGALLK 171
Q R++ + + + + E+ IF+QL +LV +QGE IDEN+ N++ A L +
Sbjct: 194 QERSQQIGRIHTAVQEVNAIFHQLGSLVKEQGEQVTTIDENISHLHDNMQNANKQLTR 251
>sp|G3V7P1|STX12_RAT Syntaxin-12 OS=Rattus norvegicus GN=Stx12 PE=1 SV=1
Length = 274
Score = 37.0 bits (84), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 91 HQQQQHHQQQQQQQMVPLQD-SYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAI 149
H++ Q Q+++ + QD ++ R A+Q +E+ I ++ IF LA ++ QG++
Sbjct: 158 HEEWNQMQSQEEEAAITEQDLELIKERETAIQQLEADILDVNQIFKDLAMMIHDQGDLID 217
Query: 150 RIDENMDDTMANVEGAQGAL 169
I+ N++ + +VE A L
Sbjct: 218 SIEANVESSEVHVERASDQL 237
>sp|P32854|PEP12_YEAST Syntaxin PEP12 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PEP12 PE=1 SV=2
Length = 288
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 109 QDSYMQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGAQGA 168
Q + ++ R + + N+E I EL +F L ++V QQG + I+ N+ T N + A
Sbjct: 194 QQNLIEQRDQEISNIERGITELNEVFKDLGSVVQQQGVLVDNIEANIYTTSDNTQLASDE 253
Query: 169 LLKYLN-SISSNRW 181
L K + ++RW
Sbjct: 254 LRKAMRYQKRTSRW 267
>sp|O14662|STX16_HUMAN Syntaxin-16 OS=Homo sapiens GN=STX16 PE=1 SV=3
Length = 325
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 27/53 (50%)
Query: 113 MQSRAEALQNVESTIHELGNIFNQLATLVSQQGEIAIRIDENMDDTMANVEGA 165
++ R ++ + +I +L IF L ++ +QG + RID N++ + E
Sbjct: 233 VEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDG 285
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.126 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,371,249
Number of Sequences: 539616
Number of extensions: 2325702
Number of successful extensions: 72179
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 373
Number of HSP's that attempted gapping in prelim test: 25748
Number of HSP's gapped (non-prelim): 17184
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)