BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028897
(202 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224099821|ref|XP_002311634.1| predicted protein [Populus trichocarpa]
gi|222851454|gb|EEE89001.1| predicted protein [Populus trichocarpa]
Length = 175
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/186 (62%), Positives = 139/186 (74%), Gaps = 18/186 (9%)
Query: 1 MKRPMPWGDQVDVISSDDSASDGDA---DNGLDGRQSSNDMTIDQPTKELTSEVENIQKQ 57
MKR +PW D VDVISSD+S+S ++GLDG++ SN +TIDQP KE TSE
Sbjct: 1 MKRTIPWTDPVDVISSDESSSSDSDIELNDGLDGQRLSNYVTIDQPIKETTSE------- 53
Query: 58 KCQGLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTN 117
G L RRAEMYQ+YM+ +PIP QR S IPF+SW GLG SIKQLY+QPLHYLTN
Sbjct: 54 --------GVLIRRAEMYQDYMRHIPIPVQRGSAIPFSSWAGLGKSIKQLYQQPLHYLTN 105
Query: 118 IHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHY 177
I L +WDQ R G+EDEH PLD ++HPCKAEAT+WL+EEVHR TS HHH+AK+W SDPMH+
Sbjct: 106 ILLNKWDQQRIGSEDEHTPLDIMIHPCKAEATIWLVEEVHRRTSSHHHVAKIWQSDPMHH 165
Query: 178 VFIDSI 183
F+DSI
Sbjct: 166 AFVDSI 171
>gi|255552097|ref|XP_002517093.1| conserved hypothetical protein [Ricinus communis]
gi|223543728|gb|EEF45256.1| conserved hypothetical protein [Ricinus communis]
Length = 175
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 135/186 (72%), Gaps = 18/186 (9%)
Query: 1 MKRPMPWGDQVDVISSDDS-ASDGD--ADNGLDGRQSSNDMTIDQPTKELTSEVENIQKQ 57
MKR MPW +Q+DVISSD+S +SDGD D LDG + S +TI Q KE+TSE
Sbjct: 1 MKRTMPWNEQIDVISSDESTSSDGDMETDVVLDGHKPSPRITISQSLKEITSE------- 53
Query: 58 KCQGLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTN 117
L RRAEMYQ+YM+QLPIP S+IPF+SWVGLG SIKQLY QPLHYLTN
Sbjct: 54 --------DVLIRRAEMYQDYMRQLPIPVHHGSVIPFSSWVGLGKSIKQLYGQPLHYLTN 105
Query: 118 IHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHY 177
I LKQWDQLRF DE K LD ++HPCKAEA+VWL+EE+HR TS H++AKLWL DPMH+
Sbjct: 106 ILLKQWDQLRFDNGDEQKSLDIVIHPCKAEASVWLVEEIHRCTSSPHYVAKLWLLDPMHH 165
Query: 178 VFIDSI 183
F+DSI
Sbjct: 166 AFVDSI 171
>gi|449432680|ref|XP_004134127.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
gi|449432682|ref|XP_004134128.1| PREDICTED: protein RDM1-like isoform 2 [Cucumis sativus]
gi|449504162|ref|XP_004162269.1| PREDICTED: protein RDM1-like isoform 1 [Cucumis sativus]
gi|449504166|ref|XP_004162270.1| PREDICTED: protein RDM1-like isoform 2 [Cucumis sativus]
Length = 174
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 138/187 (73%), Gaps = 21/187 (11%)
Query: 1 MKRPMPWGDQVDVISSDDSASD----GDADNGLDGRQSSNDMTIDQPTKELTSEVENIQK 56
MKRPMPW +QVD+ISS +S+S ++G + + S +D I P KE+TSE
Sbjct: 1 MKRPMPWNEQVDIISSGESSSSDSEAAIQNDGYEFKPSLDDFKI--PAKEMTSE------ 52
Query: 57 QKCQGLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLT 116
G L +RAEMYQEYMKQ+ IP QR S+IPFT+W+GLG SIKQLY QPLHYLT
Sbjct: 53 ---------GMLMKRAEMYQEYMKQIQIPAQRGSVIPFTTWMGLGKSIKQLYGQPLHYLT 103
Query: 117 NIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMH 176
NI LKQWDQLR G+ DE+KPLD+++HP KAEATVWL+EE+HR TS HHH+AKLWLSDPMH
Sbjct: 104 NILLKQWDQLRLGSADEYKPLDTVIHPSKAEATVWLVEEIHRRTSSHHHVAKLWLSDPMH 163
Query: 177 YVFIDSI 183
++DSI
Sbjct: 164 QAYVDSI 170
>gi|297737087|emb|CBI26288.3| unnamed protein product [Vitis vinifera]
Length = 174
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 136/186 (73%), Gaps = 19/186 (10%)
Query: 1 MKRPMPWGDQVDVISSDDSASDG---DADNGLDGRQSSNDMTIDQPTKELTSEVENIQKQ 57
MKR PW +QVDVISSD+S+S + DNG ++S D+TIDQP ++ E
Sbjct: 1 MKRAFPWNEQVDVISSDESSSSNPGVEVDNGSVDKKSM-DITIDQPARQEPFE------- 52
Query: 58 KCQGLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTN 117
+ RRAEMYQEYMKQ+PIP +R S+IPF +W+GL SIKQLY QPLHYLTN
Sbjct: 53 --------DVVIRRAEMYQEYMKQIPIPARRGSLIPFDTWMGLAKSIKQLYGQPLHYLTN 104
Query: 118 IHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHY 177
I +KQWDQLR G++DE++ LDS++HP KAEA++WLIEEVHR T+ HH+AKLWLSDPMHY
Sbjct: 105 ILVKQWDQLRIGSKDENRSLDSIIHPSKAEASIWLIEEVHRQTTSPHHMAKLWLSDPMHY 164
Query: 178 VFIDSI 183
F+DSI
Sbjct: 165 AFVDSI 170
>gi|359477543|ref|XP_002279112.2| PREDICTED: protein RDM1 [Vitis vinifera]
Length = 137
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 90/147 (61%), Positives = 111/147 (75%), Gaps = 15/147 (10%)
Query: 37 DMTIDQPTKELTSEVENIQKQKCQGLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTS 96
D+TIDQP ++ E + RRAEMYQEYMKQ+PIP +R S+IPF +
Sbjct: 2 DITIDQPARQEPFE---------------DVVIRRAEMYQEYMKQIPIPARRGSLIPFDT 46
Query: 97 WVGLGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEV 156
W+GL SIKQLY QPLHYLTNI +KQWDQLR G++DE++ LDS++HP KAEA++WLIEEV
Sbjct: 47 WMGLAKSIKQLYGQPLHYLTNILVKQWDQLRIGSKDENRSLDSIIHPSKAEASIWLIEEV 106
Query: 157 HRLTSCHHHLAKLWLSDPMHYVFIDSI 183
HR T+ HH+AKLWLSDPMHY F+DSI
Sbjct: 107 HRQTTSPHHMAKLWLSDPMHYAFVDSI 133
>gi|351722067|ref|NP_001237231.1| uncharacterized protein LOC100500129 [Glycine max]
gi|255629410|gb|ACU15051.1| unknown [Glycine max]
Length = 165
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 99/183 (54%), Positives = 123/183 (67%), Gaps = 26/183 (14%)
Query: 1 MKRPMPWGDQVDVISSDDSASDGDADNGLDGRQSSNDMTIDQPTKELTSEVENIQKQKCQ 60
MKR PW +Q+DV SS S N +TI P + ++ ++
Sbjct: 1 MKRSFPWENQIDVSSSSSPNS-----------LRPNPLTI--PNSPIDTKSQD------- 40
Query: 61 GLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHL 120
+L RRAEMYQ+YMKQ+PIP R ++IPFTSW+GLG S+KQ+Y QPLHYLTNI L
Sbjct: 41 ------ALIRRAEMYQDYMKQIPIPNHRGTMIPFTSWMGLGRSMKQIYGQPLHYLTNILL 94
Query: 121 KQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFI 180
KQWDQLR G+EDE+KPLD++VHP KAEAT+WLIEE+HR TS H HLA LW DPM+ F+
Sbjct: 95 KQWDQLRIGSEDEYKPLDNIVHPHKAEATIWLIEEIHRQTSSHFHLASLWKVDPMYNGFV 154
Query: 181 DSI 183
DSI
Sbjct: 155 DSI 157
>gi|297830986|ref|XP_002883375.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329215|gb|EFH59634.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/122 (68%), Positives = 102/122 (83%)
Query: 62 LNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLK 121
+ ++GSL RRAEMYQEYMKQ+PIPT R S+IPFTSWVGL S+KQLY QPLHYLTN+ L+
Sbjct: 38 VADEGSLLRRAEMYQEYMKQVPIPTNRGSLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQ 97
Query: 122 QWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFID 181
+WDQ RFGT+ E + LDS+ HP KAEAT+WL+EE+HR+TS H H+A LW SDPM++ FID
Sbjct: 98 RWDQSRFGTDSEEQSLDSIFHPSKAEATIWLVEEIHRITSSHLHIASLWGSDPMYHSFID 157
Query: 182 SI 183
I
Sbjct: 158 PI 159
>gi|357480931|ref|XP_003610751.1| hypothetical protein MTR_5g006600 [Medicago truncatula]
gi|355512086|gb|AES93709.1| hypothetical protein MTR_5g006600 [Medicago truncatula]
Length = 369
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 80/122 (65%), Positives = 99/122 (81%)
Query: 62 LNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLK 121
+N L RRA MYQ+YM+Q+PIP+ R S+IPFTSW+GLG SIK+LY QPLHYLTNI LK
Sbjct: 240 INSSDVLIRRAAMYQDYMEQIPIPSSRGSVIPFTSWMGLGQSIKKLYGQPLHYLTNIILK 299
Query: 122 QWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFID 181
QWDQ+R G+EDE++ LD ++HPCKAEAT+WL+E+VHR S H HLA LW DPM+ F+D
Sbjct: 300 QWDQMRIGSEDEYRRLDDIIHPCKAEATIWLMEQVHRQASSHFHLANLWKKDPMYNGFLD 359
Query: 182 SI 183
SI
Sbjct: 360 SI 361
>gi|357480933|ref|XP_003610752.1| hypothetical protein MTR_5g006610 [Medicago truncatula]
gi|355512087|gb|AES93710.1| hypothetical protein MTR_5g006610 [Medicago truncatula]
gi|388497794|gb|AFK36963.1| unknown [Medicago truncatula]
Length = 179
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 96/184 (52%), Positives = 119/184 (64%), Gaps = 14/184 (7%)
Query: 1 MKRPMPWG-DQVDVISSDDSASDGDADNGLDGRQSSNDMTIDQPTKELTSEVENIQKQKC 59
MKRP PW D++DV S S + + S + I P
Sbjct: 1 MKRPFPWDEDEIDVSDSSSSDDSPNETPNVATVLPSIHIHIPLP-------------NPS 47
Query: 60 QGLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIH 119
+N +L RRA MYQ+YMK +PIP+ R S+IPFTSW+GLG SIKQLY QPLHYLTNI
Sbjct: 48 SDVNSLDALTRRAAMYQDYMKHIPIPSSRGSLIPFTSWMGLGRSIKQLYGQPLHYLTNIL 107
Query: 120 LKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVF 179
LKQWDQLR G+EDE+ PLD ++HP KAE+T+WL+EE+HR TS H H+A LW DPM++ F
Sbjct: 108 LKQWDQLRIGSEDEYTPLDDIIHPRKAESTIWLMEEIHRQTSSHFHIADLWKKDPMYHGF 167
Query: 180 IDSI 183
IDSI
Sbjct: 168 IDSI 171
>gi|30686741|ref|NP_188907.2| RNA-directed DNA methylation 1 protein [Arabidopsis thaliana]
gi|73921107|sp|Q9LUJ3.1|RDM1_ARATH RecName: Full=Protein RDM1; AltName: Full=Protein RNA-directed DNA
methylation 1
gi|9279686|dbj|BAB01243.1| unnamed protein product [Arabidopsis thaliana]
gi|332643143|gb|AEE76664.1| RNA-directed DNA methylation 1 protein [Arabidopsis thaliana]
Length = 163
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 102/122 (83%)
Query: 62 LNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLK 121
+ ++GSL RRAEMYQ+YMKQ+PIPT R S+IPFTSWVGL S+KQLY QPLHYLTN+ L+
Sbjct: 38 VADEGSLLRRAEMYQDYMKQVPIPTNRGSLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQ 97
Query: 122 QWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFID 181
+WDQ RFGT+ E + LDS++HP KAEAT+WL+EE+HRLT H H+A LW SDPM++ FID
Sbjct: 98 RWDQSRFGTDSEEQRLDSIIHPTKAEATIWLVEEIHRLTPSHLHMALLWRSDPMYHSFID 157
Query: 182 SI 183
I
Sbjct: 158 PI 159
>gi|49259563|pdb|1VK5|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana
At3g22680
gi|150261463|pdb|2Q3T|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of
Gene Product From Arabidopsis Thaliana At3g22680
Length = 157
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 102/122 (83%)
Query: 62 LNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLK 121
+ ++GSL RRAEMYQ+YMKQ+PIPT R S+IPFTSWVGL S+KQLY QPLHYLTN+ L+
Sbjct: 32 VADEGSLLRRAEMYQDYMKQVPIPTNRGSLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQ 91
Query: 122 QWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFID 181
+WDQ RFGT+ E + LDS++HP KAEAT+WL+EE+HRLT H H+A LW SDPM++ FID
Sbjct: 92 RWDQSRFGTDSEEQRLDSIIHPTKAEATIWLVEEIHRLTPSHLHMALLWRSDPMYHSFID 151
Query: 182 SI 183
I
Sbjct: 152 PI 153
>gi|51535316|dbj|BAD38576.1| unknown protein [Oryza sativa Japonica Group]
gi|51535714|dbj|BAD37732.1| unknown protein [Oryza sativa Japonica Group]
gi|215701196|dbj|BAG92620.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 173
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 115/190 (60%), Gaps = 31/190 (16%)
Query: 1 MKRPMPWGDQVDVISSDD-------SASDGDADNGLDGRQSSNDMTIDQPTKELTSEVEN 53
MKR PW + ++V S D A G DN S+ D
Sbjct: 1 MKRAAPWEEPLEVSSDDSLSSDSDDEAGKGKGDNAFGLPNSTKAAAPD------------ 48
Query: 54 IQKQKCQGLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLH 113
G+L R+AEMYQEYMK +P+P R S+IP T+W+GLG S+KQLY+QPLH
Sbjct: 49 ------------GALIRKAEMYQEYMKHIPVPAHRGSVIPCTTWLGLGRSVKQLYKQPLH 96
Query: 114 YLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSD 173
YLTN+ LKQWDQ R G++DEH+PLD+++HP KAEA +W+ EEVHRLT+ HLA LW S
Sbjct: 97 YLTNVLLKQWDQQRVGSDDEHRPLDAIIHPVKAEALIWITEEVHRLTTSSQHLASLWASA 156
Query: 174 PMHYVFIDSI 183
PM++ +ID +
Sbjct: 157 PMYHAYIDPV 166
>gi|293332853|ref|NP_001170520.1| uncharacterized protein LOC100384531 [Zea mays]
gi|238005816|gb|ACR33943.1| unknown [Zea mays]
gi|413943611|gb|AFW76260.1| hypothetical protein ZEAMMB73_028478 [Zea mays]
Length = 218
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 73/119 (61%), Positives = 96/119 (80%)
Query: 65 KGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWD 124
+G+L RRAEMYQ+YMK++P+P R S+IPFTSW+GL S+KQLYEQPLHYLTN+ LK+WD
Sbjct: 93 EGALIRRAEMYQQYMKRIPVPAYRDSVIPFTSWLGLAGSLKQLYEQPLHYLTNVLLKKWD 152
Query: 125 QLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 183
Q R G++DEH+ LD+++HP +AE VW EEVHRLT+ HLA LW SDPM++ +D +
Sbjct: 153 QQRIGSDDEHRRLDAIIHPARAETLVWATEEVHRLTTSGQHLASLWASDPMYHAHVDPV 211
>gi|326516968|dbj|BAJ96476.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 174
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 75/119 (63%), Positives = 97/119 (81%)
Query: 65 KGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWD 124
KG+L RRAEMYQEYMK +PIP SS+IP TSW+GLG S+KQLYEQPLHYLTNI L+QWD
Sbjct: 49 KGALIRRAEMYQEYMKHIPIPDHCSSLIPSTSWLGLGRSVKQLYEQPLHYLTNILLRQWD 108
Query: 125 QLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 183
Q R G+++EH+PLD+++HP KA+A +W EE+HRLT+ +L KLW DPM++ +ID +
Sbjct: 109 QQRVGSDNEHQPLDAIIHPMKAQALIWATEEIHRLTTSSDYLGKLWAKDPMYHAYIDPV 167
>gi|224510943|pdb|3GAN|A Chain A, Crystal Structure Of Gene Product From Arabidopsis
Thaliana At3g22680 With Bound Suramin
Length = 157
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 79/122 (64%), Positives = 97/122 (79%)
Query: 62 LNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLK 121
+ ++GSL RRAE YQ+Y KQ+PIPT R S+IPFTSWVGL S KQLY QPLHYLTN+ L+
Sbjct: 32 VADEGSLLRRAEXYQDYXKQVPIPTNRGSLIPFTSWVGLSISXKQLYGQPLHYLTNVLLQ 91
Query: 122 QWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFID 181
+WDQ RFGT+ E + LDS++HP KAEAT+WL+EE+HRLT H H A LW SDP ++ FID
Sbjct: 92 RWDQSRFGTDSEEQRLDSIIHPTKAEATIWLVEEIHRLTPSHLHXALLWRSDPXYHSFID 151
Query: 182 SI 183
I
Sbjct: 152 PI 153
>gi|388497526|gb|AFK36829.1| unknown [Lotus japonicus]
gi|388503924|gb|AFK40028.1| unknown [Lotus japonicus]
Length = 165
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 77/116 (66%), Positives = 92/116 (79%)
Query: 68 LFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLR 127
L +RA MYQ+YMKQ+PIP+ R S+IPFTSW+GLG S+KQLY QPLHYLTN+ LKQWDQ R
Sbjct: 42 LIKRAGMYQDYMKQIPIPSHRGSVIPFTSWMGLGRSLKQLYGQPLHYLTNVLLKQWDQRR 101
Query: 128 FGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 183
G+ DE PLD ++HPCKAEA VWL EEVHR TS H +A LW+ DP + F+DSI
Sbjct: 102 IGSADELTPLDDIIHPCKAEAMVWLAEEVHRKTSSHFQIADLWMLDPKYNAFLDSI 157
>gi|224098766|ref|XP_002311260.1| predicted protein [Populus trichocarpa]
gi|222851080|gb|EEE88627.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/121 (54%), Positives = 89/121 (73%), Gaps = 1/121 (0%)
Query: 62 LNEKGSLFRRAEMYQEYMKQLPIPTQRSSI-IPFTSWVGLGNSIKQLYEQPLHYLTNIHL 120
++E + R+AE+YQEYMKQ+PIP+ + I + +W L +IKQ+Y QPLHYLTN L
Sbjct: 69 MDESDIMMRKAEIYQEYMKQIPIPSSTCGLPISYMTWQELARTIKQVYGQPLHYLTNKLL 128
Query: 121 KQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFI 180
KQWDQLR GT+DE KPLD+++ P +A AT+W +EE HR S H HLA+LWLSDP+ + +
Sbjct: 129 KQWDQLRIGTKDESKPLDNIIDPNRAVATIWGMEEFHRQCSSHQHLARLWLSDPLQHDSL 188
Query: 181 D 181
D
Sbjct: 189 D 189
>gi|225449533|ref|XP_002278910.1| PREDICTED: protein RDM1-like [Vitis vinifera]
Length = 141
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 88/120 (73%), Gaps = 2/120 (1%)
Query: 66 GSLFR-RAEMYQEYMKQLPIPTQRSSI-IPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQW 123
G++ R A YQ+YMKQLPIP++R IP +W LGNS+KQLY QPLHYLTN+ L++W
Sbjct: 2 GAVLRPYANAYQQYMKQLPIPSKRCETHIPNITWRELGNSMKQLYGQPLHYLTNLMLQRW 61
Query: 124 DQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDSI 183
D R G+E+EH+P+ S++ P AE+T+W++EE HR ++ H+A LW++DP + FID I
Sbjct: 62 DDSRIGSENEHRPMHSIIEPSVAESTIWVVEEFHRRSTSAQHVATLWINDPKYSAFIDPI 121
>gi|147800414|emb|CAN62046.1| hypothetical protein VITISV_026043 [Vitis vinifera]
Length = 156
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 62/121 (51%), Positives = 85/121 (70%), Gaps = 1/121 (0%)
Query: 64 EKGSLFRRAEMYQEYMKQLPIPTQRSSI-IPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQ 122
E L A YQ+YMKQLPIP++ IP +W LGNS+KQLY QPLHYLTN+ L++
Sbjct: 16 ESAVLRPYANAYQQYMKQLPIPSKHCETHIPNITWRELGNSMKQLYGQPLHYLTNLMLQR 75
Query: 123 WDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMHYVFIDS 182
WD R G+E+EHKP+ S++ P AE+T+W++EE HR ++ H+A LW++DP + FID
Sbjct: 76 WDDSRIGSENEHKPMHSIIEPSVAESTIWVVEEFHRRSTSTQHVATLWINDPKYSAFIDP 135
Query: 183 I 183
I
Sbjct: 136 I 136
>gi|255547486|ref|XP_002514800.1| conserved hypothetical protein [Ricinus communis]
gi|223545851|gb|EEF47354.1| conserved hypothetical protein [Ricinus communis]
Length = 194
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 91/142 (64%)
Query: 40 IDQPTKELTSEVENIQKQKCQGLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVG 99
I++ KE ++ +N Q K + + + AE YQ+ MK +PIP +S I F +W G
Sbjct: 45 IERNKKENVADGKNGQDMKALEEESEMKIRKAAEKYQQGMKLIPIPPSHASPILFITWQG 104
Query: 100 LGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRL 159
L SIKQ YEQPLHYLT LK+WDQ R G+ +E KPL+ ++ P KAEAT+W++E HR
Sbjct: 105 LARSIKQKYEQPLHYLTMKLLKEWDQSRLGSVEERKPLEDIIDPVKAEATIWVVEHFHRQ 164
Query: 160 TSCHHHLAKLWLSDPMHYVFID 181
S HL+KLWLSDP + FID
Sbjct: 165 CSSPGHLSKLWLSDPTYQDFID 186
>gi|30102560|gb|AAP21198.1| At3g22680 [Arabidopsis thaliana]
Length = 121
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 56/83 (67%), Positives = 70/83 (84%)
Query: 62 LNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLK 121
+ ++GSL RRAEMYQ+YMKQ+PIPT R S+IPFTSWVGL S+KQLY QPLHYLTN+ L+
Sbjct: 38 VADEGSLLRRAEMYQDYMKQVPIPTNRGSLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQ 97
Query: 122 QWDQLRFGTEDEHKPLDSLVHPC 144
+WDQ RFGT+ E + LDS++HP
Sbjct: 98 RWDQSRFGTDSEEQRLDSIIHPT 120
>gi|357480927|ref|XP_003610749.1| DNA polymerase delta subunit [Medicago truncatula]
gi|355512084|gb|AES93707.1| DNA polymerase delta subunit [Medicago truncatula]
Length = 171
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 65/117 (55%), Gaps = 30/117 (25%)
Query: 68 LFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWDQLR 127
+ RRA MYQ YM+Q+PI T R S+IP T W+GLG SIK+LY QPLHYLTNI LK+ D +
Sbjct: 76 IIRRAAMYQNYMEQIPILTSRGSVIPSTLWMGLGKSIKKLYTQPLHYLTNIILKRLDNI- 134
Query: 128 FGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTSCHHHLAKLWLSDPMH-YVFIDSI 183
+HR S H HLA LW DP++ F+DSI
Sbjct: 135 ----------------------------IHRQASSHFHLANLWKMDPLYNNGFVDSI 163
>gi|414584784|tpg|DAA35355.1| TPA: hypothetical protein ZEAMMB73_651746 [Zea mays]
Length = 297
Score = 62.8 bits (151), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 21/91 (23%)
Query: 82 LPIPTQRSSIIPFTSWVGLGNSIKQLY-------------------EQPLHYLTNIHLKQ 122
+P+P S+ PFT W+GL S+KQ E+P HYLTN+ LK
Sbjct: 92 IPVPAYCDSVTPFTLWLGLAGSLKQYLTNVLLKTSTSLRGHLGPKSEEPSHYLTNVLLKC 151
Query: 123 WDQ--LRFGTEDEHKPLDSLVHPCKAEATVW 151
LR G++ EH+ L+ ++HP +AE +W
Sbjct: 152 GTNKGLRLGSDVEHRHLNDIIHPSRAETLIW 182
>gi|413924999|gb|AFW64931.1| hypothetical protein ZEAMMB73_750051 [Zea mays]
Length = 174
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 109 EQPLHYLTNIHLKQWDQ--LRFGTEDEHKPLDSLVHPCKAEATVW 151
E+P HYLTN+ LK LR G++ EH+ LD+++HP + E +W
Sbjct: 122 EEPSHYLTNVLLKCGTNKGLRLGSDVEHRHLDAIIHPSRVETLIW 166
>gi|303236539|ref|ZP_07323124.1| putative cystathionine beta-lyase PatB [Prevotella disiens
FB035-09AN]
gi|302483287|gb|EFL46297.1| putative cystathionine beta-lyase PatB [Prevotella disiens
FB035-09AN]
Length = 389
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 9/108 (8%)
Query: 100 LGNSIKQLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRL 159
+ N Q+ E PL N + W+ DE L L +P VW EE+ R+
Sbjct: 125 IRNQGTQVLENPLKREGNTFVVDWEDFEAKCADEKTTLFLLCNPHNPAGRVWTKEELARM 184
Query: 160 TS-CHHHLAKLWLSDPMH-------YVFIDSITLNSPKSPDSTKSSSP 199
C H K+ +SD +H Y F T+N +S +SP
Sbjct: 185 NEICMRHDVKV-ISDEIHCELIMPDYTFTPFATVNEDCKRNSVIFNSP 231
>gi|322709926|gb|EFZ01501.1| DNA replication licensing factor mcm6 [Metarhizium anisopliae ARSEF
23]
Length = 936
Score = 38.1 bits (87), Expect = 2.4, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 9 DQVDVISSDDSASDGD----ADNGLDGRQSSNDMTIDQPTKELTSEVENIQKQKCQGLNE 64
D V+++ D+S DG A GRQ+ N M +D+ +S VEN +K
Sbjct: 777 DDVEMMEEDESQEDGQVLLHAAESASGRQADNTMAVDEEPPSSSSLVENADMKK------ 830
Query: 65 KGSLFRRAEMYQEYMKQLPIPTQRSS 90
+R Y +Y+K + + QR S
Sbjct: 831 -----KRTVTYDKYIKMVNMIVQRIS 851
>gi|223890058|dbj|BAH22850.1| L-cysteine desulfhydrase [Prevotella intermedia ATCC 25611]
Length = 390
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 9/102 (8%)
Query: 106 QLYEQPLHYLTNIHLKQWDQLRFGTEDEHKPLDSLVHPCKAEATVWLIEEVHRLTS-CHH 164
++ E PL N ++ WD D+ L L +P VW +E+ R+ C
Sbjct: 131 RVLESPLKREGNTYVVDWDDFEAKCADKKTTLFLLCNPHNPAGRVWSKDELARMNEICMR 190
Query: 165 HLAKLWLSDPMH-------YVFIDSITLNSPKSPDSTKSSSP 199
H K+ +SD +H YVF T+N+ +S +SP
Sbjct: 191 HDVKV-ISDEIHCELIMPGYVFTPFATVNADCQRNSVVFNSP 231
>gi|327307204|ref|XP_003238293.1| hypothetical protein TERG_00282 [Trichophyton rubrum CBS 118892]
gi|326458549|gb|EGD84002.1| hypothetical protein TERG_00282 [Trichophyton rubrum CBS 118892]
Length = 995
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 41 DQPTKELTSEVENIQKQKCQGLNEKGSLFRRA------EMYQEYMKQLPIPTQRSSIIPF 94
D T +E+ + +G SL R A E+Y +K+L P +R ++I
Sbjct: 641 DWVTHACAKALEDSTSRTREGFLITDSLIRLATATKNRELYSNTIKRLERPLRRQTLIAL 700
Query: 95 TSWVGLGNSIKQLYEQPLHYLTNIHLKQWD 124
+W +G + + LHYL +I L QWD
Sbjct: 701 LNW-RIGECDSKGAVELLHYLRDIRLSQWD 729
>gi|322693948|gb|EFY85792.1| DNA replication licensing factor mcm6 [Metarhizium acridum CQMa
102]
Length = 1015
Score = 36.2 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 15/86 (17%)
Query: 9 DQVDVISSDDSASDGD----ADNGLDGRQSSNDMTIDQPTKELTSEVENIQKQKCQGLNE 64
D V+++ D+S DG A RQ+ N M +D+ + +S VEN +K
Sbjct: 856 DDVEMMEDDESQEDGQVLRRAAEAASERQADNTMAMDEEPRSSSSLVENAHTKK------ 909
Query: 65 KGSLFRRAEMYQEYMKQLPIPTQRSS 90
+R Y +Y+K + + QR S
Sbjct: 910 -----KRTVTYDKYIKMVNMIVQRIS 930
>gi|302663681|ref|XP_003023479.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
gi|291187480|gb|EFE42861.1| conserved hypothetical protein [Trichophyton verrucosum HKI 0517]
Length = 984
Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 73 EMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWD 124
E+Y +K+L P +R ++I +W +G + + LHYL +I L QWD
Sbjct: 677 ELYSNTIKRLERPLRRQTLIALLNW-RIGECDSKGAIELLHYLRDIRLSQWD 727
>gi|302508199|ref|XP_003016060.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
gi|291179629|gb|EFE35415.1| conserved hypothetical protein [Arthroderma benhamiae CBS 112371]
Length = 965
Score = 36.2 bits (82), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 73 EMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSIKQLYEQPLHYLTNIHLKQWD 124
E+Y +K+L P +R ++I +W +G + + LHYL +I L QWD
Sbjct: 677 ELYSNTIKRLERPLRRQTLIALLNW-RIGECDSKGAIELLHYLRDIRLSQWD 727
>gi|254508920|ref|ZP_05121028.1| cytoplasmic chaperone TorD family protein [Vibrio parahaemolyticus
16]
gi|219548159|gb|EED25176.1| cytoplasmic chaperone TorD family protein [Vibrio parahaemolyticus
16]
Length = 211
Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 46 ELTSEVENIQKQKC-QGLNEKGSLFRRAEMYQEYMKQLPIPTQRSSIIPFTSWVGLGNSI 104
+L +E E QK QG++ + + + EY ++L I R ++PF SW G+
Sbjct: 34 QLEAESEQSDMQKAWQGISTAAAKANISALEDEY-QELFIGIGRGEVVPFASWHRTGS-- 90
Query: 105 KQLYEQPLHYLTNIHLKQWDQLRFGTEDEHK-PLDSLVHPCKAEATVWLIEEVHRLTSCH 163
L E+PL + N DQ+ F E++ K P D + C+ A + +E + +
Sbjct: 91 --LMEKPLAEIRN----DLDQMGFEREEQVKEPEDHIAALCEVMAMITQEDEALQQAFFN 144
Query: 164 HHLA 167
H+A
Sbjct: 145 KHIA 148
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.131 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,353,551,369
Number of Sequences: 23463169
Number of extensions: 133042441
Number of successful extensions: 356946
Number of sequences better than 100.0: 43
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 356895
Number of HSP's gapped (non-prelim): 47
length of query: 202
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 67
effective length of database: 9,191,667,552
effective search space: 615841725984
effective search space used: 615841725984
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 73 (32.7 bits)