Query 028901
Match_columns 202
No_of_seqs 118 out of 1159
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 06:32:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028901.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028901hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lck_A Mitochondrial uncouplin 100.0 5.8E-41 2E-45 268.9 16.2 178 25-202 102-285 (303)
2 1okc_A ADP, ATP carrier protei 100.0 1.1E-39 3.8E-44 260.7 18.1 178 25-202 5-200 (297)
3 1okc_A ADP, ATP carrier protei 100.0 1.2E-39 4.2E-44 260.5 16.7 174 26-202 111-296 (297)
4 2lck_A Mitochondrial uncouplin 100.0 1.6E-39 5.5E-44 260.5 15.9 173 29-202 3-191 (303)
5 2a3d_A Protein (de novo three- 36.2 56 0.0019 18.4 3.6 26 140-165 10-35 (73)
6 1e91_A Paired amphipathic heli 32.4 10 0.00034 23.6 0.1 24 141-164 14-37 (85)
7 3vjj_A P9-1; 3.00A {Rice black 24.7 24 0.00083 27.2 1.0 34 133-170 274-307 (368)
8 1g1e_B SIN3A; four-helix bundl 22.3 19 0.00064 22.6 0.0 25 141-165 17-41 (89)
9 3fbl_A Putative uncharacterize 20.4 87 0.003 18.1 2.6 17 66-82 5-21 (82)
10 3tgu_G UQCRQ, mitochondrial ub 20.1 1E+02 0.0036 18.8 3.1 39 76-114 32-70 (81)
No 1
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=5.8e-41 Score=268.90 Aligned_cols=178 Identities=17% Similarity=0.254 Sum_probs=165.0
Q ss_pred chhHHHHHHHHHHHHHHHHhhchHHHHHHHHhcCCC-----CCCCHHHHHHHHHHhhchhhhccCchHhHHHHHhhhhhH
Q 028901 25 GHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHPI-----KYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCR 99 (202)
Q Consensus 25 ~~~~~~~~ag~~a~~~~~~i~~Ple~ik~~~Q~~~~-----~~~~~~~~~~~i~~~~g~~~ly~G~~~~~~~~~~~~~~~ 99 (202)
......+++|++||+++.++++|+|+||+|+|++.. .|++.++++++|+++||++|||||+.|.+++.+++.+++
T Consensus 102 ~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~ 181 (303)
T 2lck_A 102 AGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAE 181 (303)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHH
Confidence 456788999999999999999999999999999763 689999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhhcCCCCchHHHHHHHhHHHHHHhhhcCCHHHHHHHHHhCC-CCCCCHHHHHHHHHHhhChhhhhcch
Q 028901 100 FGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQP-HFAKGLADGIPKLYASEGIFGFYRGL 178 (202)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~-~~~~~~~~~~~~i~~~~G~~gl~rG~ 178 (202)
|.+||.+|+.+.+......+....+++|++||++++++++|+|+||+|+|++. ..|.++++|+++++++||++|||||+
T Consensus 182 f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~~~y~~~~~~~~~i~~~eG~~glyrG~ 261 (303)
T 2lck_A 182 LVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSALGQYHSAGHCALTMLRKEGPRAFYKGF 261 (303)
T ss_dssp HHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSSCCSHHHHHHHHHHSSCTHHHHSCC
T ss_pred HHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccccccCCHHHHHHHHHHHcChHHhhccH
Confidence 99999999988754434556678899999999999999999999999999985 46899999999999999999999999
Q ss_pred HHhhhhhcccchhhhhhhhhhccC
Q 028901 179 IPLLGRNLPYIERYLRCFPFVNVF 202 (202)
Q Consensus 179 ~~~~~~~~~~~~~~f~~ye~~k~~ 202 (202)
.++++|.+|+++++|.+||.+|++
T Consensus 262 ~~~~~r~~p~~~i~f~~ye~~k~~ 285 (303)
T 2lck_A 262 MPSFLRLGSWNVVMFVTYEQLKRA 285 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHH
Confidence 999999999999999999999874
No 2
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=1.1e-39 Score=260.73 Aligned_cols=178 Identities=21% Similarity=0.372 Sum_probs=159.6
Q ss_pred chhHHHHHHHHHHHHHHHHhhchHHHHHHHHhcCC--------CCCCCHHHHHHHHHHhhchhhhccCchHhHHHHHhhh
Q 028901 25 GHYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHP--------IKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQG 96 (202)
Q Consensus 25 ~~~~~~~~ag~~a~~~~~~i~~Ple~ik~~~Q~~~--------~~~~~~~~~~~~i~~~~g~~~ly~G~~~~~~~~~~~~ 96 (202)
...+..+++|+++|+++.++++|+|++|+|+|++. ..|++.++++++++++||++|||||+.+++++.+++.
T Consensus 5 ~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~ 84 (297)
T 1okc_A 5 LSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPTQ 84 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHHH
Confidence 34678899999999999999999999999999974 2588999999999999999999999999999999999
Q ss_pred hhHHhHHHHHHHHHhhhcCCCC----chHHHHHHHhHHHHHHhhhcCCHHHHHHHHHhCC------CCCCCHHHHHHHHH
Q 028901 97 GCRFGLYEYFKSLYSSVLGDCS----RSSVFFLSSASAEVFANVALCPFEAIKVQVQAQP------HFAKGLADGIPKLY 166 (202)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~------~~~~~~~~~~~~i~ 166 (202)
+++|.+||.+|+.+........ +....+++|++||++++++++|+|+||+|+|++. ..|.++++++++++
T Consensus 85 ~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~ 164 (297)
T 1okc_A 85 ALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIF 164 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHH
Confidence 9999999999996533211121 2356789999999999999999999999999983 36899999999999
Q ss_pred HhhChhhhhcchHHhhhhhcccchhhhhhhhhhccC
Q 028901 167 ASEGIFGFYRGLIPLLGRNLPYIERYLRCFPFVNVF 202 (202)
Q Consensus 167 ~~~G~~gl~rG~~~~~~~~~~~~~~~f~~ye~~k~~ 202 (202)
++||++|||||+.+++++.+|+++++|.+||.+|++
T Consensus 165 ~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~ 200 (297)
T 1okc_A 165 KSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM 200 (297)
T ss_dssp HHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999863
No 3
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=1.2e-39 Score=260.49 Aligned_cols=174 Identities=17% Similarity=0.284 Sum_probs=156.3
Q ss_pred hhHHHHHHHHHHHHHHHHhhchHHHHHHHHhcCC------CCCCCHHHHHHHHHHhhchhhhccCchHhHHHHHhhhhhH
Q 028901 26 HYSICAIGGMLSAGTAHLAITPLDVVKVNMQVHP------IKYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGGCR 99 (202)
Q Consensus 26 ~~~~~~~ag~~a~~~~~~i~~Ple~ik~~~Q~~~------~~~~~~~~~~~~i~~~~g~~~ly~G~~~~~~~~~~~~~~~ 99 (202)
.....+++|++||+++.++++|+|+||+|+|++. ..|++.++++++++++||++|||||+.|++++.++..+++
T Consensus 111 ~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~ 190 (297)
T 1okc_A 111 YFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAY 190 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHH
Confidence 4577899999999999999999999999999974 3578999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHhhhcCCCCchHHHHHHHhHHHHHHhhhcCCHHHHHHHHHhCC------CCCCCHHHHHHHHHHhhChhh
Q 028901 100 FGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQP------HFAKGLADGIPKLYASEGIFG 173 (202)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~------~~~~~~~~~~~~i~~~~G~~g 173 (202)
|.+||.+|+.+.+. ...+....+++|.+||++++++++|+|+||+|+|++. ..|.++++|+++++++||++|
T Consensus 191 f~~ye~~k~~~~~~--~~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~~~~~~~~~y~~~~~~~~~i~~~eG~~g 268 (297)
T 1okc_A 191 FGVYDTAKGMLPDP--KNVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIAKDEGPKA 268 (297)
T ss_dssp HHHHHHHHHSSCGG--GCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCGGGCSCSSHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHhccC--CCccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHcCcCe
Confidence 99999999977543 2345677899999999999999999999999999874 258999999999999999999
Q ss_pred hhcchHHhhhhhcccchhhhhhhhhhccC
Q 028901 174 FYRGLIPLLGRNLPYIERYLRCFPFVNVF 202 (202)
Q Consensus 174 l~rG~~~~~~~~~~~~~~~f~~ye~~k~~ 202 (202)
||||+.++++|. +.+++.|.+||.+|++
T Consensus 269 lyrG~~~~~~r~-~~~~~~f~~ye~~k~~ 296 (297)
T 1okc_A 269 FFKGAWSNVLRG-MGGAFVLVLYDEIKKF 296 (297)
T ss_dssp GGTTHHHHHHHH-HHHHHHHHHHHTC---
T ss_pred EecchHHHHHhh-ccceeeehHHHHHHhh
Confidence 999999999996 5789999999999874
No 4
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=1.6e-39 Score=260.53 Aligned_cols=173 Identities=21% Similarity=0.329 Sum_probs=159.9
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHHhcCCC-----------CCCCHHHHHHHHHHhhchhhhccCchHhHHHHHhhhh
Q 028901 29 ICAIGGMLSAGTAHLAITPLDVVKVNMQVHPI-----------KYSSIASCYTNLLKEQGASAFWRGSAAKFFGYGAQGG 97 (202)
Q Consensus 29 ~~~~ag~~a~~~~~~i~~Ple~ik~~~Q~~~~-----------~~~~~~~~~~~i~~~~g~~~ly~G~~~~~~~~~~~~~ 97 (202)
..+++|++||+++.++++|+|+||+|+|++.. .|++.++++++++++||+++||||+.+++++.+++.+
T Consensus 3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~ 82 (303)
T 2lck_A 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS 82 (303)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence 36789999999999999999999999999753 5789999999999999999999999999999999999
Q ss_pred hHHhHHHHHHHHHhhhcCCCCchHHHHHHHhHHHHHHhhhcCCHHHHHHHHHhCCC-----CCCCHHHHHHHHHHhhChh
Q 028901 98 CRFGLYEYFKSLYSSVLGDCSRSSVFFLSSASAEVFANVALCPFEAIKVQVQAQPH-----FAKGLADGIPKLYASEGIF 172 (202)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~~-----~~~~~~~~~~~i~~~~G~~ 172 (202)
++|.+||.+|+.+.+.. +..+....+++|.+||++++++++|+|+||+|+|++.. .|.+.++++++++++||++
T Consensus 83 i~f~~ye~~k~~~~~~~-~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~eG~~ 161 (303)
T 2lck_A 83 VRIGLYDSVKQFYTKGS-EHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIAREEGIR 161 (303)
T ss_dssp HTTTHHHHHHHHHSCCC-SSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHhcCC-cCCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHhcChh
Confidence 99999999999886532 24567788999999999999999999999999999853 6899999999999999999
Q ss_pred hhhcchHHhhhhhcccchhhhhhhhhhccC
Q 028901 173 GFYRGLIPLLGRNLPYIERYLRCFPFVNVF 202 (202)
Q Consensus 173 gl~rG~~~~~~~~~~~~~~~f~~ye~~k~~ 202 (202)
|||||+.+++++.+|+++++|.+||.+|++
T Consensus 162 glyrG~~~~l~~~~~~~~i~f~~ye~~k~~ 191 (303)
T 2lck_A 162 GLWKGTSPNVARNAIVNCAELVTYDLIKDT 191 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhCCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999863
No 5
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=36.24 E-value=56 Score=18.44 Aligned_cols=26 Identities=27% Similarity=0.157 Sum_probs=15.2
Q ss_pred CHHHHHHHHHhCCCCCCCHHHHHHHH
Q 028901 140 PFEAIKVQVQAQPHFAKGLADGIPKL 165 (202)
Q Consensus 140 P~d~iktr~q~~~~~~~~~~~~~~~i 165 (202)
-+..||||+|.-+.........-+.|
T Consensus 10 rlaaiktrlqalggseaelaafekei 35 (73)
T 2a3d_A 10 RLAAIKTRLQALGGSEAELAAFEKEI 35 (73)
T ss_dssp HHHHHHHHHHHCSSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHH
Confidence 35678889888765444443333444
No 6
>1e91_A Paired amphipathic helix protein SIN3B; eukaryotic transcriptional regulation, SIN3, PAH domains, protein-protein interactions; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1pd7_A
Probab=32.40 E-value=10 Score=23.60 Aligned_cols=24 Identities=13% Similarity=0.271 Sum_probs=18.6
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHH
Q 028901 141 FEAIKVQVQAQPHFAKGLADGIPK 164 (202)
Q Consensus 141 ~d~iktr~q~~~~~~~~~~~~~~~ 164 (202)
++.||+|.|.++..|..+.+.++.
T Consensus 14 v~kVK~rF~~~p~~Y~~FL~il~~ 37 (85)
T 1e91_A 14 VNKIKTRFLDHPEIYRSFLEILHT 37 (85)
T ss_dssp HHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcChHHHHHHHHHHHH
Confidence 467888888888888887777764
No 7
>3vjj_A P9-1; 3.00A {Rice black streaked dwarf virus}
Probab=24.74 E-value=24 Score=27.15 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=25.9
Q ss_pred HHhhhcCCHHHHHHHHHhCCCCCCCHHHHHHHHHHhhC
Q 028901 133 FANVALCPFEAIKVQVQAQPHFAKGLADGIPKLYASEG 170 (202)
Q Consensus 133 ~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~i~~~~G 170 (202)
++++--+|||.+|-.++..- ++...+++.+.++|
T Consensus 274 LaTFdnypfdllRfqL~Sli----stp~~I~e~i~K~G 307 (368)
T 3vjj_A 274 LATFDNYPFDLLRFQLSSLI----STPALIREKIAKEG 307 (368)
T ss_dssp HHHCTTCBHHHHHHHCSSCC----CCCHHHHHHHHHSC
T ss_pred eecCCCCCHHHHHHHhhhhc----cChHHHHHHHHhcC
Confidence 56677889999988877653 34567888888887
No 8
>1g1e_B SIN3A; four-helix bundle, protein-peptide complex, transcription; NMR {Mus musculus} SCOP: a.59.1.1 PDB: 1s5q_B 1s5r_B 2l9s_B
Probab=22.30 E-value=19 Score=22.56 Aligned_cols=25 Identities=24% Similarity=0.327 Sum_probs=19.8
Q ss_pred HHHHHHHHHhCCCCCCCHHHHHHHH
Q 028901 141 FEAIKVQVQAQPHFAKGLADGIPKL 165 (202)
Q Consensus 141 ~d~iktr~q~~~~~~~~~~~~~~~i 165 (202)
+..||+|.|.++..|..+.+.++.-
T Consensus 17 vnkVK~rF~~~p~~Y~~FL~IL~~y 41 (89)
T 1g1e_B 17 VNKIKNRFQGQPDIYKAFLEILHTY 41 (89)
T ss_dssp HHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHccChHHHHHHHHHHHHH
Confidence 4678999998888888888777753
No 9
>3fbl_A Putative uncharacterized protein; AFV1, archaeal virus, extremophiles, lipothrixviridae, structural protein, DNA-binding protein; 1.95A {Acidianus filamentous virus 1}
Probab=20.45 E-value=87 Score=18.05 Aligned_cols=17 Identities=12% Similarity=0.136 Sum_probs=12.8
Q ss_pred HHHHHHHHHhhchhhhc
Q 028901 66 ASCYTNLLKEQGASAFW 82 (202)
Q Consensus 66 ~~~~~~i~~~~g~~~ly 82 (202)
.-.++++++.+|+..+-
T Consensus 5 rlaikeicktdgipnik 21 (82)
T 3fbl_A 5 RLAIKEICKTDGIPNIK 21 (82)
T ss_dssp HHHHHHHHHHTTCCGGG
T ss_pred HHHHHHHHccCCCCcch
Confidence 34678999999986643
No 10
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=20.13 E-value=1e+02 Score=18.78 Aligned_cols=39 Identities=13% Similarity=0.227 Sum_probs=28.8
Q ss_pred hchhhhccCchHhHHHHHhhhhhHHhHHHHHHHHHhhhc
Q 028901 76 QGASAFWRGSAAKFFGYGAQGGCRFGLYEYFKSLYSSVL 114 (202)
Q Consensus 76 ~g~~~ly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (202)
+|+...+|-+...++..+|..++.+.++++.++......
T Consensus 32 ~~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne~l~ 70 (81)
T 3tgu_G 32 DALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLK 70 (81)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 455566666677777888888888899999888765443
Done!