Query 028904
Match_columns 202
No_of_seqs 119 out of 832
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 04:22:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028904.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028904hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02314 pectinesterase 100.0 4.6E-33 1E-37 256.9 19.7 162 33-196 69-236 (586)
2 TIGR01614 PME_inhib pectineste 100.0 1.6E-32 3.4E-37 219.0 18.7 173 9-193 5-177 (178)
3 PLN02313 Pectinesterase/pectin 100.0 1.1E-32 2.3E-37 254.4 19.8 162 33-195 58-221 (587)
4 PLN02484 probable pectinestera 100.0 1.7E-32 3.7E-37 252.8 19.4 157 33-195 72-228 (587)
5 PLN02468 putative pectinestera 100.0 3.1E-32 6.8E-37 250.3 18.7 156 33-196 63-219 (565)
6 PLN02217 probable pectinestera 100.0 2.5E-32 5.4E-37 253.4 18.1 160 32-196 51-210 (670)
7 PLN02990 Probable pectinestera 100.0 7.2E-32 1.6E-36 248.1 18.6 158 33-195 52-211 (572)
8 PLN02713 Probable pectinestera 100.0 1.2E-31 2.6E-36 246.4 18.2 182 6-192 4-188 (566)
9 smart00856 PMEI Plant invertas 100.0 1.8E-31 4E-36 206.3 16.5 147 32-189 2-148 (148)
10 PLN02506 putative pectinestera 100.0 2.4E-31 5.3E-36 242.8 19.1 169 23-195 23-193 (537)
11 PLN02745 Putative pectinestera 100.0 6.1E-31 1.3E-35 242.7 20.4 156 32-196 77-234 (596)
12 PLN02197 pectinesterase 100.0 1E-30 2.2E-35 240.5 20.5 155 32-195 36-192 (588)
13 PLN02708 Probable pectinestera 100.0 2E-30 4.4E-35 237.9 19.0 155 32-195 42-197 (553)
14 PLN02995 Probable pectinestera 100.0 7.5E-30 1.6E-34 233.4 19.3 160 34-197 34-194 (539)
15 PLN02301 pectinesterase/pectin 100.0 1.1E-29 2.5E-34 232.2 19.1 154 32-196 48-203 (548)
16 PLN02416 probable pectinestera 100.0 1.8E-29 3.9E-34 230.9 18.4 166 23-195 27-193 (541)
17 PLN02698 Probable pectinestera 100.0 1.8E-29 4E-34 229.1 15.9 157 30-195 18-178 (497)
18 PF04043 PMEI: Plant invertase 100.0 3.6E-29 7.7E-34 193.8 15.2 148 32-189 2-152 (152)
19 PLN03043 Probable pectinestera 100.0 4.7E-29 1E-33 228.2 16.3 150 38-192 3-156 (538)
20 PLN02933 Probable pectinestera 99.9 2.6E-23 5.7E-28 189.3 17.8 128 62-195 48-183 (530)
21 PLN02488 probable pectinestera 99.9 9.6E-23 2.1E-27 183.9 14.7 151 38-194 2-160 (509)
22 PLN02201 probable pectinestera 99.9 1.6E-22 3.4E-27 184.2 15.5 126 65-194 37-164 (520)
23 PLN02170 probable pectinestera 99.9 3.9E-22 8.4E-27 181.3 14.1 131 45-197 58-188 (529)
24 PLN02916 pectinesterase family 99.7 1.1E-16 2.4E-21 145.2 11.6 80 103-195 63-142 (502)
25 KOG1733 Mitochondrial import i 66.4 45 0.00098 23.8 7.4 50 74-124 29-85 (97)
26 PF07870 DUF1657: Protein of u 57.5 45 0.00098 20.9 6.2 44 75-120 4-47 (50)
27 PRK00442 tatA twin arginine tr 53.8 14 0.0003 26.5 2.6 17 6-22 6-22 (92)
28 PRK00191 tatA twin arginine tr 48.3 19 0.00042 25.3 2.6 21 1-22 1-21 (84)
29 PRK01470 tatA twin arginine tr 47.6 20 0.00044 22.8 2.4 20 1-21 1-20 (51)
30 PRK00720 tatA twin arginine tr 46.1 23 0.0005 24.6 2.7 17 6-22 6-22 (78)
31 PF11172 DUF2959: Protein of u 44.1 1.4E+02 0.0031 24.4 7.4 86 39-127 5-91 (201)
32 PRK01614 tatE twin arginine tr 41.7 29 0.00063 24.4 2.6 17 6-22 6-22 (85)
33 PRK03554 tatA twin arginine tr 41.6 29 0.00064 24.6 2.7 17 6-22 6-22 (89)
34 PF02953 zf-Tim10_DDP: Tim10/D 41.5 74 0.0016 20.6 4.6 29 96-125 37-65 (66)
35 PF11714 Inhibitor_I53: Thromb 40.0 28 0.0006 23.6 2.2 16 7-22 2-17 (78)
36 PF11395 DUF2873: Protein of u 38.9 34 0.00074 20.3 2.2 15 8-22 18-32 (43)
37 PRK04598 tatA twin arginine tr 38.8 35 0.00076 23.8 2.7 17 6-22 6-22 (81)
38 PRK04561 tatA twin arginine tr 34.6 45 0.00098 22.9 2.6 17 6-22 6-22 (75)
39 PF01093 Clusterin: Clusterin; 34.6 1.8E+02 0.0039 26.8 7.2 91 70-161 8-107 (436)
40 PRK02958 tatA twin arginine tr 34.5 45 0.00098 22.8 2.6 17 6-22 6-22 (73)
41 PF10360 DUF2433: Protein of u 31.7 58 0.0012 24.9 3.1 18 179-196 49-66 (132)
42 PRK01833 tatA twin arginine tr 29.4 63 0.0014 22.2 2.7 17 6-22 6-22 (74)
43 KOG4514 Uncharacterized conser 27.2 2.5E+02 0.0055 22.8 6.1 58 62-125 121-179 (222)
44 PF10792 DUF2605: Protein of u 26.8 1.9E+02 0.004 21.0 4.8 56 137-196 15-70 (98)
45 COG1826 TatA Sec-independent p 26.1 53 0.0011 23.3 2.0 16 6-21 6-21 (94)
46 PF08287 DASH_Spc19: Spc19; I 23.6 1.8E+02 0.0039 22.6 4.7 25 105-129 2-26 (153)
47 PF14290 DUF4370: Domain of un 23.5 4.1E+02 0.0088 22.0 6.7 59 103-162 131-189 (239)
48 TIGR01411 tatAE twin arginine- 22.0 81 0.0018 19.5 2.0 15 7-21 5-19 (47)
49 PF04108 APG17: Autophagy prot 21.8 5.6E+02 0.012 23.1 8.2 23 34-56 206-228 (412)
50 KOG4841 Dolichol-phosphate man 21.7 78 0.0017 22.4 2.0 26 103-128 65-90 (95)
51 PRK03625 tatE twin arginine tr 21.1 1E+02 0.0022 20.7 2.4 17 6-22 6-22 (67)
No 1
>PLN02314 pectinesterase
Probab=100.00 E-value=4.6e-33 Score=256.92 Aligned_cols=162 Identities=24% Similarity=0.367 Sum_probs=142.4
Q ss_pred hhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHHHH
Q 028904 33 NIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVI 112 (202)
Q Consensus 33 ~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~el~ 112 (202)
....|+.+|+.|+||++|+++|+++|.+...+|++|++++++++++++.++...++++... +.+++.+ .||+||+|+|
T Consensus 69 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~al~vti~~a~~a~~~~~~L~~~-~~~~~~k-~AL~DC~Ell 146 (586)
T PLN02314 69 PATSLKAVCSVTRYPESCISSISSLPTSNTTDPETLFKLSLKVAIDELSKLSDLPQKLINE-TNDERLK-SALRVCETLF 146 (586)
T ss_pred HHHHHHHhccCCCChHHHHHHHhcccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHH-HHHHHHHHHH
Confidence 5679999999999999999999999988778999999999999999999999999888653 4678899 9999999999
Q ss_pred HhHHHHHHHHHHHhccccCCc--cccchhhHHHHHHHhhcchhhHhhccCCCCC----CchhHHHHHHHHHHHHHHHHHH
Q 028904 113 GDSIDELQDSMDELGHIRNSN--FWLTMGDVQTWVSAALTYEDTCVDGLQGRPL----NGYTKTMIRRHILKVAHLTSNA 186 (202)
Q Consensus 113 ~~a~d~L~~a~~al~~~~~~~--~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~----~~~~~~~v~~~~~~~~~L~sna 186 (202)
++++|+|++++++|+..+... +.+..+|++||||||||||+||+|||++.+. ++.+++.|...+.++.||+||+
T Consensus 147 ddAid~L~~Sl~~l~~~~~~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~~~~k~~~s~vk~~~~~~l~n~~eLtSNa 226 (586)
T PLN02314 147 DDAIDRLNDSISSMQVGEGEKILSSSKIDDLKTWLSATITDQETCIDALQELSQNKYANSTLTNEVKTAMSNSTEFTSNS 226 (586)
T ss_pred HHHHHHHHHHHHHHhhcccccccccccHHHHHhHHHHHhcCHhHHHHhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997443211 2456799999999999999999999987633 3568889999999999999999
Q ss_pred HHHHHhhhcC
Q 028904 187 LALINSYAAG 196 (202)
Q Consensus 187 LAi~~~~~~~ 196 (202)
|||++.+...
T Consensus 227 LAIi~~l~~~ 236 (586)
T PLN02314 227 LAIVSKILGI 236 (586)
T ss_pred HHHHhhhccc
Confidence 9999997764
No 2
>TIGR01614 PME_inhib pectinesterase inhibitor domain. This model describes a plant domain of about 200 amino acids, characterized by four conserved Cys residues, shown in a pectinesterase inhibitor from Kiwi to form two disulfide bonds: first to second and third to fourth. Roughly half the members of this family have the region described by this model followed immediately by a pectinesterase domain, pfam01095. This suggests that the pairing of the enzymatic domain and its inhibitor reflects a conserved regulatory mechanism for this enzyme family.
Probab=100.00 E-value=1.6e-32 Score=219.00 Aligned_cols=173 Identities=29% Similarity=0.473 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCchhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 028904 9 TLVALLIILLEFSTNLASNPSDNSNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMV 88 (202)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~ 88 (202)
++.++++|++.+|..+.++ +.......|+.+|++|+||++|+.+|.++|++...|+.+|+.++++.+..++..+...+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~C~~t~~~~~C~~~L~~~~~~~~ad~~~la~~ai~~a~~~~~~~~~~i~ 83 (178)
T TIGR01614 5 LSLLLFLLLLSLVATSSSN-SLNATQSLIKRICKKTEYPNFCISTLKSDPSSAKADLQGLANISVSAALSNASDTLDHIS 83 (178)
T ss_pred HHHHHHHHHHccccccccc-CCcchHHHHHHHHcCCCChHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555555677766656 777889999999999999999999999999887789999999999999999999999999
Q ss_pred HhhcCCCCChhhhhhHHHHHHHHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchh
Q 028904 89 KMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYT 168 (202)
Q Consensus 89 ~l~~~~~~~~~~~~~aL~dC~el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~ 168 (202)
++.+..+ ++..+ .++++|.++|++++++|++++++++. ++++|+++|||+|+++++||+|||.+.+ +..
T Consensus 84 ~l~~~~~-~~~~~-~al~~C~~~y~~a~~~L~~a~~~l~~-------~~~~d~~~~ls~a~~~~~tC~d~f~~~~--~~~ 152 (178)
T TIGR01614 84 KLLLTKG-DPRDK-SALEDCVELYSDAVDALDKALASLKS-------KDYSDAETWLSSALTDPSTCEDGFEELG--GIV 152 (178)
T ss_pred HHHccCC-CHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHh-------cchhHHHHHHHHHHcccchHHHHhccCC--CCc
Confidence 9876543 67888 99999999999999999999999985 3578999999999999999999998764 345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Q 028904 169 KTMIRRHILKVAHLTSNALALINSY 193 (202)
Q Consensus 169 ~~~v~~~~~~~~~L~snaLAi~~~~ 193 (202)
+++|..++.++.+|++|+|+|++.+
T Consensus 153 ~~~l~~~~~~~~~l~s~alai~~~~ 177 (178)
T TIGR01614 153 KSPLTKRNNNVKKLSSITLAIIKML 177 (178)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc
Confidence 7889999999999999999999875
No 3
>PLN02313 Pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.1e-32 Score=254.38 Aligned_cols=162 Identities=28% Similarity=0.504 Sum_probs=141.5
Q ss_pred hhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCChhhhhhHHHHHHHH
Q 028904 33 NIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRI-PGMIPRETAGAVADCIEV 111 (202)
Q Consensus 33 ~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~-~~~~~~~~~~aL~dC~el 111 (202)
....|+.+|+.|+||++|+++|+++|.+...+|.+|++++|++++.++..+...++++... .+.+++.+ .||+||+|+
T Consensus 58 ~~~~Iks~C~~T~YP~~C~ssLs~~~~~~~~~~~~Li~~sL~vtl~~a~~a~~~vs~L~~~~~~l~~r~k-~AL~DClEL 136 (587)
T PLN02313 58 SHAVLKSVCSSTLYPELCFSAVAATGGKELTSQKEVIEASLNLTTKAVKHNYFAVKKLIAKRKGLTPREV-TALHDCLET 136 (587)
T ss_pred HhHHHHHhccCCCChHHHHHHHhccCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCHHHH-HHHHHHHHH
Confidence 4569999999999999999999998877667999999999999999999999999988653 24678889 999999999
Q ss_pred HHhHHHHHHHHHHHhccccC-CccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 028904 112 IGDSIDELQDSMDELGHIRN-SNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALI 190 (202)
Q Consensus 112 ~~~a~d~L~~a~~al~~~~~-~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~ 190 (202)
|++++|+|++++..|..... +.+..+.+|++||||||||||+||+|||++.+.++.+++.|.+.+.++.+|+||+|||+
T Consensus 137 lddavD~L~~Sl~~l~~~~~~~~~~~~~dDlqTWLSAALTnq~TClDGF~~~~~~~~vk~~m~~~l~n~teLtSNALAIv 216 (587)
T PLN02313 137 IDETLDELHVAVEDLHQYPKQKSLRKHADDLKTLISSAITNQGTCLDGFSYDDADRKVRKALLKGQVHVEHMCSNALAMI 216 (587)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHhcchhhHHHhhhccCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999985321 23345679999999999999999999998654445688899999999999999999999
Q ss_pred Hhhhc
Q 028904 191 NSYAA 195 (202)
Q Consensus 191 ~~~~~ 195 (202)
+.+..
T Consensus 217 ~~~~~ 221 (587)
T PLN02313 217 KNMTE 221 (587)
T ss_pred hcccc
Confidence 98765
No 4
>PLN02484 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=1.7e-32 Score=252.76 Aligned_cols=157 Identities=28% Similarity=0.451 Sum_probs=137.5
Q ss_pred hhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHHHH
Q 028904 33 NIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVI 112 (202)
Q Consensus 33 ~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~el~ 112 (202)
....|+.+|+.|+||++|+++|+++|.+...+|++|+++++++++.++.++......+.. .+.+++.+ .||+||+|+|
T Consensus 72 ~~~~Iks~C~~T~YP~lC~sSLs~~p~s~~~~p~~L~~~slnvtl~~~~~a~~~s~~l~~-~~~~~r~k-~AL~DClELl 149 (587)
T PLN02484 72 PTQAISKTCSKTRFPNLCVDSLLDFPGSLTASESDLIHISFNMTLQHFSKALYLSSTISY-VQMPPRVR-SAYDSCLELL 149 (587)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh-ccCCHHHH-HHHHHHHHHH
Confidence 456999999999999999999999998777899999999999999999988766555543 45678899 9999999999
Q ss_pred HhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 028904 113 GDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINS 192 (202)
Q Consensus 113 ~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~~~ 192 (202)
++++|+|++++..|..... ....+|++||||||||||+||+|||++.+ ++.+++.|.+.+.++.+|+||+|||++.
T Consensus 150 ddAid~L~~Sl~~l~~~~~---~~~~~DvkTWLSAALTnq~TClDGF~e~~-~~~vk~~m~~~l~~l~~LtSNALAIi~~ 225 (587)
T PLN02484 150 DDSVDALSRALSSVVPSSG---GGSPQDVVTWLSAALTNHDTCTEGFDGVN-GGEVKDQMTGALKDLSELVSNCLAIFSA 225 (587)
T ss_pred HHHHHHHHHHHHHHhcccc---ccchHHHHhHHHHHhccHhhHHHHhhccc-ccchHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999985321 34579999999999999999999998653 2468899999999999999999999999
Q ss_pred hhc
Q 028904 193 YAA 195 (202)
Q Consensus 193 ~~~ 195 (202)
+..
T Consensus 226 ~~~ 228 (587)
T PLN02484 226 SNG 228 (587)
T ss_pred ccc
Confidence 775
No 5
>PLN02468 putative pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=3.1e-32 Score=250.31 Aligned_cols=156 Identities=25% Similarity=0.415 Sum_probs=136.8
Q ss_pred hhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCChhhhhhHHHHHHHH
Q 028904 33 NIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIP-GMIPRETAGAVADCIEV 111 (202)
Q Consensus 33 ~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~-~~~~~~~~~aL~dC~el 111 (202)
....|+.+|+.|+||++|+++|+++|.+...+|++|++++++++++++.++...+.++.... +.+++.+ .||+||+|+
T Consensus 63 ~~~~Ik~~C~~T~Yp~lC~sSLs~~~~s~~~~p~~L~~~al~vti~~~~~a~~~~s~l~~~~~~~d~~~k-~AL~DC~EL 141 (565)
T PLN02468 63 ISTSVKAVCDVTLYKDSCYETLAPAPKASQLQPEELFKYAVKVAINELSKASQAFSNSEGFLGVKDNMTN-AALNACQEL 141 (565)
T ss_pred hhHHHHHhccCCCChHHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccCChHHH-HHHHHHHHH
Confidence 45699999999999999999999999877789999999999999999999988877775432 3578889 999999999
Q ss_pred HHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 028904 112 IGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALIN 191 (202)
Q Consensus 112 ~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~~ 191 (202)
|++++++|++++.+|.... . .+..+|++||||||||||+||+|||++. .+++.|.+.+.++.||+||+|||++
T Consensus 142 lddaid~L~~Sl~~l~~~~--~-~~~~dDl~TWLSAAlTnq~TClDGF~e~----~vk~~~~~~l~n~~eLtSNaLAIi~ 214 (565)
T PLN02468 142 LDLAIDNLNNSLTSSGGVS--V-LDNVDDLRTWLSSAGTYQETCIDGLAEP----NLKSFGENHLKNSTELTSNSLAIIT 214 (565)
T ss_pred HHHHHHHHHHHHHHHhccc--c-ccchHHHHHHHHHHhcchhhhhhhhccc----CchHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999997431 1 3567999999999999999999999863 4678899999999999999999999
Q ss_pred hhhcC
Q 028904 192 SYAAG 196 (202)
Q Consensus 192 ~~~~~ 196 (202)
.+...
T Consensus 215 ~l~~~ 219 (565)
T PLN02468 215 WIGKI 219 (565)
T ss_pred ccccc
Confidence 86654
No 6
>PLN02217 probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=2.5e-32 Score=253.37 Aligned_cols=160 Identities=29% Similarity=0.482 Sum_probs=138.3
Q ss_pred chhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHHH
Q 028904 32 SNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEV 111 (202)
Q Consensus 32 a~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~el 111 (202)
+..+.|+.+|+.|+||++|+++|++++ ....+|++|++++|+++++++.++...+.++... +.+++++ .|++||+|+
T Consensus 51 ~~~~~Ikt~C~sT~YP~lC~sSLs~~~-~~~~~p~dLi~aaL~vTl~a~~~a~~~~s~L~~~-~~~~r~k-~AL~DClEL 127 (670)
T PLN02217 51 TSVKAIKDVCAPTDYKETCEDTLRKDA-KNTSDPLELVKTAFNATMKQISDVAKKSQTMIEL-QKDPRTK-MALDQCKEL 127 (670)
T ss_pred hHHHHHHHHhcCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCChHHH-HHHHHHHHH
Confidence 345699999999999999999999988 4567999999999999999999999888877432 3578889 999999999
Q ss_pred HHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 028904 112 IGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALIN 191 (202)
Q Consensus 112 ~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~~ 191 (202)
|++++|+|++++..|+..+...+....+|++||||||||||+||.|||.+.+ +.+++.|.+.+.++.+|+||+|||++
T Consensus 128 lddAvDeL~~Sl~~L~~~~~~~~~~~~dDvqTWLSAALTnQdTClDGF~~~~--~~vk~~m~~~l~nvseLtSNALAmv~ 205 (670)
T PLN02217 128 MDYAIGELSKSFEELGKFEFHKVDEALIKLRIWLSATISHEQTCLDGFQGTQ--GNAGETIKKALKTAVQLTHNGLAMVS 205 (670)
T ss_pred HHHHHHHHHHHHHHHhhccccccccchhHHHHHHHHHHhchhHHHHhhhhhc--hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999997433223344579999999999999999999998643 56888999999999999999999999
Q ss_pred hhhcC
Q 028904 192 SYAAG 196 (202)
Q Consensus 192 ~~~~~ 196 (202)
.+...
T Consensus 206 ~lss~ 210 (670)
T PLN02217 206 EMSNY 210 (670)
T ss_pred hcccc
Confidence 87653
No 7
>PLN02990 Probable pectinesterase/pectinesterase inhibitor
Probab=100.00 E-value=7.2e-32 Score=248.06 Aligned_cols=158 Identities=20% Similarity=0.388 Sum_probs=137.0
Q ss_pred hhHHHhcccCCCCChhhHHHHhhh-hhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCChhhhhhHHHHHHH
Q 028904 33 NIEYIRTSCSGTIYRRLCYRSLSV-YAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRI-PGMIPRETAGAVADCIE 110 (202)
Q Consensus 33 ~~~~i~~~C~~T~yp~~C~~sL~~-~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~-~~~~~~~~~~aL~dC~e 110 (202)
....|+.+|+.|+||++|+++|++ .|. ..+|++|++++++++++++.++...+.++... .+.+++++ .|++||+|
T Consensus 52 ~~~~Ik~~C~~T~YP~lC~ssLs~a~~~--~~~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~r~k-~Al~DC~E 128 (572)
T PLN02990 52 TTKAVEAVCAPTDYKETCVNSLMKASPD--STQPLDLIKLGFNVTIRSINDSIKKASGELKAKAANDPETK-GALELCEK 128 (572)
T ss_pred hhHHHHHhhcCCCCcHHHHHHhhhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHH-HHHHHHHH
Confidence 456999999999999999999998 443 47899999999999999999998888776532 35688999 99999999
Q ss_pred HHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 028904 111 VIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALI 190 (202)
Q Consensus 111 l~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~ 190 (202)
+|++++|+|++++++|+..+...+....+|++||||||||||+||+|||.+.+ +.+++.|.+.+.++.||+||+|||+
T Consensus 129 LlddAvdeL~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~e~~--s~lk~~~~~~l~nv~~LtSNALAiv 206 (572)
T PLN02990 129 LMNDATDDLKKCLDNFDGFSIDQIEDFVEDLRVWLSGSIAYQQTCMDTFEEIK--SNLSQDMLKIFKTSRELTSNGLAMI 206 (572)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHhccHhhHHHhhhccc--hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998543334445579999999999999999999998653 4688999999999999999999999
Q ss_pred Hhhhc
Q 028904 191 NSYAA 195 (202)
Q Consensus 191 ~~~~~ 195 (202)
+.+..
T Consensus 207 ~~~~~ 211 (572)
T PLN02990 207 TNISN 211 (572)
T ss_pred hhhhc
Confidence 98775
No 8
>PLN02713 Probable pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=1.2e-31 Score=246.36 Aligned_cols=182 Identities=24% Similarity=0.250 Sum_probs=146.5
Q ss_pred hhHHHHHHHHHHH-HHHhhcCCCCCCCchhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHH
Q 028904 6 LRHTLVALLIILL-EFSTNLASNPSDNSNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTS 84 (202)
Q Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~ 84 (202)
.-|++-.+-+++| .|+-..+.-+.+ .....+..+|+.|+||++|+++|++. ...+|.+|++++|++++.++..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~C~~T~YP~~C~ssLs~s---~~~d~~~l~~aaL~~tl~~a~~a~ 79 (566)
T PLN02713 4 KLILLTTLALLLLLFFSSSSASDPPP-STPVSPSTICNTTPDPSFCKSVLPHN---QPGNVYDYGRFSVRKSLSQSRKFL 79 (566)
T ss_pred hHHHHHHHHHHHHHhcchhhhcCCCc-CCCCCCccccCCCCChHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4455555444444 444433333322 34566788999999999999999862 256899999999999999999999
Q ss_pred HHHHHhhcCCC--CChhhhhhHHHHHHHHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCC
Q 028904 85 RMMVKMSRIPG--MIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGR 162 (202)
Q Consensus 85 ~~v~~l~~~~~--~~~~~~~~aL~dC~el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~ 162 (202)
..+.++....+ .+++++ .||+||+|+|++++|+|++++.+|+..+...+.+..+|++||||||||||+||+|||.+.
T Consensus 80 ~~vs~L~~~~~~~~~~r~k-~AL~DC~ELlddavD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALTnq~TClDGF~~~ 158 (566)
T PLN02713 80 SLVDRYLKRNSTLLSKSAI-RALEDCQFLAGLNIDFLLSSFETVNSSSKTLSDPQADDVQTLLSAILTNQQTCLDGLQAA 158 (566)
T ss_pred HHHHHHHhcccccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhHHHHHHHhhcchhhhhhhhhcc
Confidence 99998876442 378889 999999999999999999999999854322345678999999999999999999999977
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 028904 163 PLNGYTKTMIRRHILKVAHLTSNALALINS 192 (202)
Q Consensus 163 ~~~~~~~~~v~~~~~~~~~L~snaLAi~~~ 192 (202)
+.++.+++.|...+.++.+|+||+|||++.
T Consensus 159 ~~~~~~k~~v~~~l~nvt~LtSNaLAlv~~ 188 (566)
T PLN02713 159 SSAWSVRNGLAVPLSNDTKLYSVSLALFTK 188 (566)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 555567888999999999999999999987
No 9
>smart00856 PMEI Plant invertase/pectin methylesterase inhibitor. This domain inhibits pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex PUBMED:8521860. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein PUBMED:8521860. It is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical PUBMED:10880981.
Probab=99.98 E-value=1.8e-31 Score=206.31 Aligned_cols=147 Identities=33% Similarity=0.538 Sum_probs=134.4
Q ss_pred chhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHHH
Q 028904 32 SNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEV 111 (202)
Q Consensus 32 a~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~el 111 (202)
...+.|+.+|++|+||.+|+.+|.++|.+...|+.+|++++++.++.++..+...+.++.+. +.++..+ .+|+||.++
T Consensus 2 ~~~~~i~~~C~~T~~~~~C~~~L~~~~~~~~~d~~~l~~~ai~~~~~~a~~~~~~~~~l~~~-~~~~~~~-~al~~C~~~ 79 (148)
T smart00856 2 PTSKLIDSICKSTDYPDFCVSSLSSDPSSSATDPKDLAKIAIKVALSQATKTLSFISSLLKK-TKDPRLK-AALKDCLEL 79 (148)
T ss_pred CHHHHHHHHhcCCCChHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCHHHH-HHHHHHHHH
Confidence 35789999999999999999999999988789999999999999999999999999998763 4678889 999999999
Q ss_pred HHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 028904 112 IGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALAL 189 (202)
Q Consensus 112 ~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi 189 (202)
|++++++|++++.++.. .+++|+++|||+|++|++||+|||.+.+ +.++++|..++.++.+|++|+|+|
T Consensus 80 y~~a~~~L~~a~~~l~~-------~~~~d~~~~lsaa~t~~~tC~d~f~~~~--~~~~~~l~~~~~~~~~l~s~aLai 148 (148)
T smart00856 80 YDDAVDSLEKALEELKS-------GDYDDVATWLSAALTDQDTCLDGFEEND--DKVKSPLTKRNDNLEKLTSNALAI 148 (148)
T ss_pred HHHHHHHHHHHHHHHHh-------cchhHHHHHHHHHhcCcchHHhHhccCC--cchhHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999985 3588999999999999999999998753 457889999999999999999986
No 10
>PLN02506 putative pectinesterase/pectinesterase inhibitor
Probab=99.98 E-value=2.4e-31 Score=242.83 Aligned_cols=169 Identities=25% Similarity=0.398 Sum_probs=144.4
Q ss_pred hcCCCCCCCchhHHHhcccCCCCChhhHHHHhhhhhcc-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhh
Q 028904 23 NLASNPSDNSNIEYIRTSCSGTIYRRLCYRSLSVYAAK-IKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRET 101 (202)
Q Consensus 23 ~~~~~~~~~a~~~~i~~~C~~T~yp~~C~~sL~~~p~s-~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~ 101 (202)
-.++++..+.....|+.+|+.|+||++|+++|+++... ...+|++|++++|++++.++.++...+.++... +.+++++
T Consensus 23 ~~~~~~~~~~~~~~I~s~C~~T~YP~~C~ssLs~~~~~~~~~~p~~L~~aAL~vtl~~a~~a~~~v~~l~~~-~~~~r~~ 101 (537)
T PLN02506 23 TSSSPYQELNFQALIAQACQFVENHSSCVSNIQAELKKSGPRTPHSVLSAALKATLDEARLAIDMITKFNAL-SISYREQ 101 (537)
T ss_pred cccCchhhhhHHHHHHHHccCCCCcHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChHHH
Confidence 66777777788889999999999999999999986443 347899999999999999999999999888543 3578889
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhccccCC-ccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHH
Q 028904 102 AGAVADCIEVIGDSIDELQDSMDELGHIRNS-NFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVA 180 (202)
Q Consensus 102 ~~aL~dC~el~~~a~d~L~~a~~al~~~~~~-~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~ 180 (202)
.|++||+|+|++++++|.+++.+++..... ......+|++|||||||||++||+|||++.+ +.+++.|...+.++.
T Consensus 102 -~Al~DC~EllddSvd~L~~Sl~el~~~~~~~~~~~~~~Dv~TWLSAALT~q~TC~DGF~~~~--~~~k~~v~~~l~nv~ 178 (537)
T PLN02506 102 -VAIEDCKELLDFSVSELAWSLLEMNKIRAGHDNVAYEGNLKAWLSAALSNQDTCLEGFEGTD--RHLENFIKGSLKQVT 178 (537)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhHHhHHHHHhccHhHHHHhhhhcc--hhHHHHHHHHHHHHH
Confidence 999999999999999999999998643211 1112358999999999999999999998753 467889999999999
Q ss_pred HHHHHHHHHHHhhhc
Q 028904 181 HLTSNALALINSYAA 195 (202)
Q Consensus 181 ~L~snaLAi~~~~~~ 195 (202)
+|+||+|||+++++.
T Consensus 179 ~LtSNALAiv~~l~~ 193 (537)
T PLN02506 179 QLISNVLAMYTQLHS 193 (537)
T ss_pred HHHHHHHHHHhhccc
Confidence 999999999998776
No 11
>PLN02745 Putative pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=6.1e-31 Score=242.67 Aligned_cols=156 Identities=24% Similarity=0.437 Sum_probs=136.2
Q ss_pred chhHHHhcccCCCCChhhHHHHhhhhhc--ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHH
Q 028904 32 SNIEYIRTSCSGTIYRRLCYRSLSVYAA--KIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCI 109 (202)
Q Consensus 32 a~~~~i~~~C~~T~yp~~C~~sL~~~p~--s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~ 109 (202)
...+.|+.+|+.|+||++|+++|+++.. +...+|++|++++|+++++++..+...+.++. +.+++.+ .|++||+
T Consensus 77 ~~~~~Ik~~C~~T~YP~~C~sSLs~~~~~~~~~~~p~~Ll~aAL~vtl~~~~~a~~~~~~l~---~~~~r~k-~Al~DC~ 152 (596)
T PLN02745 77 QVDKIIQTVCNATLYKQTCENTLKKGTEKDPSLAQPKDLLKSAIKAVNDDLDKVLKKVLSFK---FENPDEK-DAIEDCK 152 (596)
T ss_pred hHHHHHHHhcCCCCChHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhc---cCCHHHH-HHHHHHH
Confidence 4568899999999999999999999753 23578999999999999999999988887774 3578889 9999999
Q ss_pred HHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 028904 110 EVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALAL 189 (202)
Q Consensus 110 el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi 189 (202)
|+|++++++|++++.+|.. +...+.+..+|++||||||||||+||+|||.+. .+++.|.+.+.++.+|+||+|||
T Consensus 153 ELlddAid~L~~Sl~~l~~-~~~~~~~~~~Dv~TWLSAALT~q~TClDGF~e~----~l~s~m~~~l~~~~eLtSNALAi 227 (596)
T PLN02745 153 LLVEDAKEELKASISRIND-EVNKLAKNVPDLNNWLSAVMSYQETCIDGFPEG----KLKSEMEKTFKSSQELTSNSLAM 227 (596)
T ss_pred HHHHHHHHHHHHHHHHHhh-cccccccchHHHHHHHHHHhccHhHHHhhhccc----chHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999974 222345678999999999999999999999873 47889999999999999999999
Q ss_pred HHhhhcC
Q 028904 190 INSYAAG 196 (202)
Q Consensus 190 ~~~~~~~ 196 (202)
++.++..
T Consensus 228 v~~lss~ 234 (596)
T PLN02745 228 VSSLTSF 234 (596)
T ss_pred Hhhhhhh
Confidence 9987763
No 12
>PLN02197 pectinesterase
Probab=99.97 E-value=1e-30 Score=240.51 Aligned_cols=155 Identities=17% Similarity=0.353 Sum_probs=133.3
Q ss_pred chhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCCChhhhhhHHHHHH
Q 028904 32 SNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMS--RIPGMIPRETAGAVADCI 109 (202)
Q Consensus 32 a~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~--~~~~~~~~~~~~aL~dC~ 109 (202)
...+.|+.+|+.|+||++|+++|++++ ..+|++|+++++++++.+++++...+..+. ...+.+++++ .|++||+
T Consensus 36 ~~~k~I~s~C~~T~YP~lC~ssLs~~~---s~~p~~L~~aaL~vtl~~~~~a~~~~s~l~~~~~~~~~~r~k-~Al~DC~ 111 (588)
T PLN02197 36 PQMKAVQGICQSTSDKASCVKTLEPVK---SDDPNKLIKAFMLATKDAITKSSNFTGQTEGNMGSSISPNNK-AVLDYCK 111 (588)
T ss_pred hhHHHHHHhcCCCCChHHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccCCHHHH-HHHHHHH
Confidence 445589999999999999999999988 358999999999999999999998888664 1223578899 9999999
Q ss_pred HHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 028904 110 EVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALAL 189 (202)
Q Consensus 110 el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi 189 (202)
|+|++++|+|++++.+|+. +...+....+|++||||||||||+||.|||.+. .+++.|...+.++.+|+||+|||
T Consensus 112 eLl~davd~L~~Sl~~l~~-~~~~~~~~~~DvqTWLSAALTnq~TClDGf~~~----~~k~~v~~~l~nv~~LtSNaLAi 186 (588)
T PLN02197 112 RVFMYALEDLSTIVEEMGE-DLNQIGSKIDQLKQWLTGVYNYQTDCLDDIEED----DLRKTIGEGIANSKILTSNAIDI 186 (588)
T ss_pred HHHHHHHHHHHHHHHHHhh-cccccccchhhHHHHHHHHHhChhhhhccccCc----chHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999973 112233457999999999999999999999863 46788999999999999999999
Q ss_pred HHhhhc
Q 028904 190 INSYAA 195 (202)
Q Consensus 190 ~~~~~~ 195 (202)
++.++.
T Consensus 187 v~~ls~ 192 (588)
T PLN02197 187 FHSVVS 192 (588)
T ss_pred hhccch
Confidence 998654
No 13
>PLN02708 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=2e-30 Score=237.86 Aligned_cols=155 Identities=23% Similarity=0.338 Sum_probs=131.1
Q ss_pred chhHHHhcccCCCCChhhHHHHhhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHH
Q 028904 32 SNIEYIRTSCSGTIYRRLCYRSLSVYAA-KIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIE 110 (202)
Q Consensus 32 a~~~~i~~~C~~T~yp~~C~~sL~~~p~-s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~e 110 (202)
.+...|+..|+.|+||++|+++|++++. ....+|.+|++++|+++++++..+...++.+....+.+...+ .|++||+|
T Consensus 42 ~~~~~I~s~C~~T~YP~lC~sSLs~~~~~~~~~~p~~Li~aAL~vsl~~a~~a~~~v~~L~~~~~~~~~~~-~AL~DC~E 120 (553)
T PLN02708 42 STPPQILLACNATRFPDTCVSSLSNAGRVPPDPKPIQIIQSAISVSRENLKTAQSMVKSILDSSAGNVNRT-TAATNCLE 120 (553)
T ss_pred CccHHHHHhccCCCCcHHHHHHHhhccCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCchHH-HHHHHHHH
Confidence 4578999999999999999999999884 345689999999999999999999999998875432233346 89999999
Q ss_pred HHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 028904 111 VIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALI 190 (202)
Q Consensus 111 l~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~ 190 (202)
+|++++|+|++++..+.. ...+|++||||||||||+||.|||.+.+..+.+++.| ..+.++.+|+||+|||+
T Consensus 121 Llddavd~L~~Sl~~L~~-------~~~~DvqTWLSAALTnq~TClDGF~~~~~~~~v~~~~-~~L~nvs~LtSNSLAmv 192 (553)
T PLN02708 121 VLSNSEHRISSTDIALPR-------GKIKDARAWMSAALLYQYDCWSALKYVNDTSQVNDTM-SFLDSLIGLTSNALSMM 192 (553)
T ss_pred HHHHHHHHHHHHHHHhhh-------cchHHHHHHHHHHhccHhHHHHHhhccCccchHHHHH-HHHHHHHHHHHHHHHhh
Confidence 999999999999998863 3579999999999999999999998653223456666 68899999999999999
Q ss_pred Hhhhc
Q 028904 191 NSYAA 195 (202)
Q Consensus 191 ~~~~~ 195 (202)
+.+..
T Consensus 193 ~~~~~ 197 (553)
T PLN02708 193 ASYDI 197 (553)
T ss_pred hcccc
Confidence 98653
No 14
>PLN02995 Probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=7.5e-30 Score=233.35 Aligned_cols=160 Identities=21% Similarity=0.289 Sum_probs=130.3
Q ss_pred hHHHhcccCCCCChhhHHHHhhhhhcccC-CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHHHH
Q 028904 34 IEYIRTSCSGTIYRRLCYRSLSVYAAKIK-SNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVI 112 (202)
Q Consensus 34 ~~~i~~~C~~T~yp~~C~~sL~~~p~s~~-~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~el~ 112 (202)
...|+.+|+.|.||++|+++|.++|.+.. .++.+++++++++++.++.++...+..+.+. ..+++.+ .|++||+|+|
T Consensus 34 ~~~Irs~C~~T~YP~lC~sSLs~~~~s~s~~~~~~l~~~~~~aAl~~a~sa~~~i~~l~~~-~~~~r~~-~AL~DC~ELl 111 (539)
T PLN02995 34 STDIDGWCDKTPYPDPCKCYFKNHNGFRQPTQISEFRVMLVEAAMDRAISARDELTNSGKN-CTDFKKQ-AVLADCIDLY 111 (539)
T ss_pred hHHHHhhcCCCCChHHHHHHHhhccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCHHHH-HHHHHHHHHH
Confidence 34999999999999999999999887533 4889999999999999999999988888542 3567888 9999999999
Q ss_pred HhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 028904 113 GDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINS 192 (202)
Q Consensus 113 ~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~~~ 192 (202)
++++|+|++++++|+...........+|++|||||||||++||+|||++.+..+.+++.+. ..++.+|+||+|||++.
T Consensus 112 ~DAvD~L~~Sl~~l~~~~~~~~~~~~~DvqTWLSAALT~q~TC~DGF~~~~~~~~v~~~v~--~~~~~~ltSNaLAi~~~ 189 (539)
T PLN02995 112 GDTIMQLNRTLQGVSPKAGAAKRCTDFDAQTWLSTALTNTETCRRGSSDLNVSDFITPIVS--NTKISHLISNCLAVNGA 189 (539)
T ss_pred HHHHHHHHHHHHHHhhccccccccchhhHHHHHHHHhcchhhhhhhhccccchhhhhhhhh--hhhHHHHHHHHHHHhhh
Confidence 9999999999999974322111234679999999999999999999987543333333332 26899999999999998
Q ss_pred hhcCC
Q 028904 193 YAAGS 197 (202)
Q Consensus 193 ~~~~~ 197 (202)
+...+
T Consensus 190 l~~~~ 194 (539)
T PLN02995 190 LLTAG 194 (539)
T ss_pred hcccc
Confidence 77653
No 15
>PLN02301 pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.1e-29 Score=232.15 Aligned_cols=154 Identities=25% Similarity=0.415 Sum_probs=134.6
Q ss_pred chhHHHhcccCCCCChhhHHHHhhhhhcc--cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHH
Q 028904 32 SNIEYIRTSCSGTIYRRLCYRSLSVYAAK--IKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCI 109 (202)
Q Consensus 32 a~~~~i~~~C~~T~yp~~C~~sL~~~p~s--~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~ 109 (202)
...+.|+..|+.|+||++|+++|++++.+ ...+|.+|++++|+++++++..+...+.++.. .+.+++.+ .|++||+
T Consensus 48 ~~~~~Iks~C~~T~YP~~C~ssLs~~a~~~~~~~~p~~L~~aaL~vsl~~a~~a~~~vs~l~~-~~~~~~~~-aAL~DC~ 125 (548)
T PLN02301 48 SPPSLLQTLCDRAHDQDSCQAMVSEIATNTVMKLNRVDLLQVLLKESTPHLQNTIEMASEIRI-RINDPRDK-AALADCV 125 (548)
T ss_pred CchHHHHHHhcCCCChHHHHHHHhhccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCChHHH-HHHHHHH
Confidence 55789999999999999999999998754 34589999999999999999999999998844 34678888 9999999
Q ss_pred HHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 028904 110 EVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALAL 189 (202)
Q Consensus 110 el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi 189 (202)
|+|++++|+|++++++|+.... +..+|++||||||||||+||+|||.+.. ++.|...+.++.+|+||+|||
T Consensus 126 ELl~davd~L~~Sl~~l~~~~~----~~~~Dv~TWLSAALT~q~TC~DGF~~~~-----~~~~~~~l~n~~qL~SNsLAi 196 (548)
T PLN02301 126 ELMDLSKDRIKDSVEALGNVTS----KSHADAHTWLSSVLTNHVTCLDGINGPS-----RQSMKPGLKDLISRARTSLAI 196 (548)
T ss_pred HHHHHHHHHHHHHHHHhhcccc----cchHHHHHHHHHHhcchhhHHhhhhhhh-----hhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999975321 3468999999999999999999998642 567888999999999999999
Q ss_pred HHhhhcC
Q 028904 190 INSYAAG 196 (202)
Q Consensus 190 ~~~~~~~ 196 (202)
++.++..
T Consensus 197 v~~l~~~ 203 (548)
T PLN02301 197 LVSVSPA 203 (548)
T ss_pred hcccccc
Confidence 9987654
No 16
>PLN02416 probable pectinesterase/pectinesterase inhibitor
Probab=99.97 E-value=1.8e-29 Score=230.94 Aligned_cols=166 Identities=19% Similarity=0.339 Sum_probs=140.5
Q ss_pred hcCCCCCCCchhHHHhcccCCCCChhhHHHHhhhhhccc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhh
Q 028904 23 NLASNPSDNSNIEYIRTSCSGTIYRRLCYRSLSVYAAKI-KSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRET 101 (202)
Q Consensus 23 ~~~~~~~~~a~~~~i~~~C~~T~yp~~C~~sL~~~p~s~-~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~ 101 (202)
+++.+-+.++..++|+.+|+.|+||++|+++|++++... ..++.+++..+++.++..+..+...++.+....+..++.+
T Consensus 27 ~~~~~~~~~~~~~~Iks~C~~T~YP~lC~~sLss~~~~~~s~~~~~ll~~sL~~A~~~~~~~s~l~s~~~~~~~~~~~~k 106 (541)
T PLN02416 27 NASYTTSLDPHLSSLTSFCKSTPYPDACFDSLKLSISINISPNILNFLLQTLQTAISEAGKLTNLLSGAGQSSNIIEKQR 106 (541)
T ss_pred ccccccCCchHHHHHHHhcCCCCChHHHHHHHhhcccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCCCHHHH
Confidence 566666666788899999999999999999999987532 3567789999999999998888877776643333467888
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHH
Q 028904 102 AGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAH 181 (202)
Q Consensus 102 ~~aL~dC~el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~ 181 (202)
.||+||.|+|++++|+|++++.+|+..+ . +..+|++|||||||||++||+|||++.+ +.+++.|..++.++.|
T Consensus 107 -~AL~DC~El~~dAvD~L~~Sl~~L~~~~---~-~~~~DvqTWLSAALT~q~TC~DGF~~~~--~~~~~~i~~~~~~v~q 179 (541)
T PLN02416 107 -GTIQDCKELHQITVSSLKRSVSRIQAGD---S-RKLADARAYLSAALTNKNTCLEGLDSAS--GPLKPKLVNSFTSTYK 179 (541)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhhcc---c-cchhhHHHHHHHHhcchhhHHhhhhhcC--cchhhHHHHHHHHHHH
Confidence 9999999999999999999999997532 2 3679999999999999999999998753 4578899999999999
Q ss_pred HHHHHHHHHHhhhc
Q 028904 182 LTSNALALINSYAA 195 (202)
Q Consensus 182 L~snaLAi~~~~~~ 195 (202)
|+||+|||++.+..
T Consensus 180 ltSNALAlv~~~~~ 193 (541)
T PLN02416 180 HVSNSLSMLPKSRR 193 (541)
T ss_pred HHHHHHHHhccccc
Confidence 99999999988664
No 17
>PLN02698 Probable pectinesterase/pectinesterase inhibitor
Probab=99.96 E-value=1.8e-29 Score=229.06 Aligned_cols=157 Identities=22% Similarity=0.306 Sum_probs=136.0
Q ss_pred CCchhHHHhcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC--ChhhhhhHHHH
Q 028904 30 DNSNIEYIRTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGM--IPRETAGAVAD 107 (202)
Q Consensus 30 ~~a~~~~i~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~--~~~~~~~aL~d 107 (202)
+.+....|+.+|+.|+||++|+++|++.+. +|.+|++.+|++++.++..+...+.++....+. +++.+ .+++|
T Consensus 18 ~~~~~~~I~~~C~~T~YP~~C~ssLs~~~~----~p~~Li~aal~vtl~~~~~a~~~~~~l~~~~~~~~~~r~~-~Al~D 92 (497)
T PLN02698 18 PFAYQNEVQRECSFTKYPSLCVQTLRGLRH----DGVDIVSVLVNKTISETNLPLSSSMGSSYQLSLEEATYTP-SVSDS 92 (497)
T ss_pred chhHHHHHHHhccCCCChHHHHHHHhccCC----CHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcChHHH-HHHHH
Confidence 347899999999999999999999999774 899999999999999999999999887654333 36778 99999
Q ss_pred HHHHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCC--CchhHHHHHHHHHHHHHHHHH
Q 028904 108 CIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPL--NGYTKTMIRRHILKVAHLTSN 185 (202)
Q Consensus 108 C~el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~--~~~~~~~v~~~~~~~~~L~sn 185 (202)
|+|+|++++++|++++.+|.... .+..+|++||||||||||+||+|||.+... .+.+++.|.+.+.++.+|+||
T Consensus 93 C~Ell~dsvd~L~~Sl~~l~~~~----~~~~~Dv~TWLSAALT~q~TClDGF~~~~~~~~~~v~~~i~~~l~~~~~ltSN 168 (497)
T PLN02698 93 CERLMKMSLKRLRQSLLALKGSS----RKNKHDIQTWLSAALTFQQACKDSIVDSTGYSGTSAISQISQKMDHLSRLVSN 168 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcc----ccchhHHHHHHHHhhcchhhHHHHHhhhcccccchHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999997532 145789999999999999999999954211 246788999999999999999
Q ss_pred HHHHHHhhhc
Q 028904 186 ALALINSYAA 195 (202)
Q Consensus 186 aLAi~~~~~~ 195 (202)
+|||++.+..
T Consensus 169 ALAmv~~l~~ 178 (497)
T PLN02698 169 SLALVNRITP 178 (497)
T ss_pred HHHHHhhhhc
Confidence 9999999876
No 18
>PF04043 PMEI: Plant invertase/pectin methylesterase inhibitor; InterPro: IPR006501 This entry represents a plant domain of about 200 amino acids, characterised by four conserved cysteine residues. This domain inhibits pectinesterase/pectin methylesterases (PMEs) and invertases through formation of a non-covalent 1:1 complex []. It has been implicated in the regulation of fruit development, carbohydrate metabolism and cell wall extension. It may also be involved in inhibiting microbial pathogen PMEs. It has been observed that it is often expressed as a large inactive preprotein []. This domain is also found at the N-termini of PMEs predicted from DNA sequences, suggesting that both PMEs and their inhibitors are expressed as a single polyprotein and subsequently processed. It has two disulphide bridges and is mainly alpha-helical in structure [].; GO: 0004857 enzyme inhibitor activity, 0030599 pectinesterase activity; PDB: 1X90_A 1X8Z_C 1X91_A 1XG2_B 1RJ4_D 2CJ4_B 2XQR_F 2CJ7_A 2CJ8_A 2CJ6_A ....
Probab=99.96 E-value=3.6e-29 Score=193.78 Aligned_cols=148 Identities=34% Similarity=0.521 Sum_probs=127.1
Q ss_pred chhHHHhcccCCCCChh-hHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHH
Q 028904 32 SNIEYIRTSCSGTIYRR-LCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIE 110 (202)
Q Consensus 32 a~~~~i~~~C~~T~yp~-~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~e 110 (202)
++...|+.+|++|+||. +|+.+|.+++.....|+.+|+.++|+++..++..+..++.++....+.++..+ .+|++|.+
T Consensus 2 s~~~~I~~~C~~T~~~~~~C~~~L~~~~~~~~~d~~~l~~~av~~a~~~~~~a~~~~~~l~~~~~~~~~~~-~~l~~C~~ 80 (152)
T PF04043_consen 2 STSSLIQDICKSTPYPYNLCLSTLSSDPSSSAADPKELARIAVQAALSNATSASAFISKLLKNPSKDPNAK-QALQDCQE 80 (152)
T ss_dssp --HHHHHHHHCTSS--HHHHHHHHHTCCCGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-S-THHHH-HHHHHHHH
T ss_pred chHHHHHHHhhCCCCCcHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCHHhh-HHHHHHHH
Confidence 45789999999999777 99999999977778999999999999999999999999999987545688889 99999999
Q ss_pred HHHhHHHHHHHHHHHh--ccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 028904 111 VIGDSIDELQDSMDEL--GHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALA 188 (202)
Q Consensus 111 l~~~a~d~L~~a~~al--~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLA 188 (202)
+|++++++|+++++.| .. ++++|+++|||+|++|++||+|||.+.. ++.+++|...+.++.+|++|+|+
T Consensus 81 ~y~~a~~~l~~a~~~l~~~~-------~~~~~~~~~lsaa~~~~~tC~~~f~~~~--~~~~~~l~~~~~~~~~l~s~aLa 151 (152)
T PF04043_consen 81 LYDDAVDSLQRALEALNSKN-------GDYDDARTWLSAALTNQDTCEDGFEEAG--SPVKSPLVQRNDNVEKLSSNALA 151 (152)
T ss_dssp HHHHHHHHHHHHHHHH--HH-------T-HHHHHHHHHHHHHHHHHHHHHC-TTS--SS--HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccc-------chhHHHHHHHHHHHHHHHHHHHHhcccC--CCccchHHHHHHHHHHHHHHHhh
Confidence 9999999999999999 43 4688999999999999999999995222 35688999999999999999999
Q ss_pred H
Q 028904 189 L 189 (202)
Q Consensus 189 i 189 (202)
|
T Consensus 152 i 152 (152)
T PF04043_consen 152 I 152 (152)
T ss_dssp H
T ss_pred C
Confidence 7
No 19
>PLN03043 Probable pectinesterase/pectinesterase inhibitor; Provisional
Probab=99.96 E-value=4.7e-29 Score=228.23 Aligned_cols=150 Identities=24% Similarity=0.320 Sum_probs=129.9
Q ss_pred hcccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCChhhhhhHHHHHHHHHH
Q 028904 38 RTSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSR----IPGMIPRETAGAVADCIEVIG 113 (202)
Q Consensus 38 ~~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~----~~~~~~~~~~~aL~dC~el~~ 113 (202)
..+|+.|+||++|+++|++++.+ ..+|.++++.+|++++.++..+...+.++.. ..+.+++++ .|++||+|+|+
T Consensus 3 ~~~C~~T~YP~lC~ssLs~~~~~-~~~p~~l~~aaL~vtl~~a~~a~~~vs~l~~~~~~~~~~~~r~~-~AL~DC~ELld 80 (538)
T PLN03043 3 SLACKSTLYPKLCRSILSTVKSS-PSDPYEYGKFSVKQCLKQARRLSKVINYYLTHENQPGKMTHEEI-GALADCGELSE 80 (538)
T ss_pred CcccCCCCCcHHHHHHHhhccCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCCHHHH-HHHHHHHHHHH
Confidence 35899999999999999987754 3589999999999999999999999988763 124678888 99999999999
Q ss_pred hHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHh
Q 028904 114 DSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINS 192 (202)
Q Consensus 114 ~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~~~ 192 (202)
+++|+|.+++.+|+.... ......+|++||||||||||+||+|||.+.+ +.++..|...+.++.+|+||+|||++.
T Consensus 81 dSvD~L~~Sl~~L~~~~~-~~~~~~~DvqTWLSAALTnqdTClDGF~~~~--~~~k~~i~~~l~nvt~LtSNaLAlv~~ 156 (538)
T PLN03043 81 LNVDYLETISSELKSAEL-MTDALVERVTSLLSGVVTNQQTCYDGLVDSK--SSFAAALGAPLGNLTRLYSVSLGLVSH 156 (538)
T ss_pred HHHHHHHHHHHHHhcccc-ccccchhhHHHhHHHhhcChhhhhchhhccc--hhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999975321 1234578999999999999999999998754 467889999999999999999999985
No 20
>PLN02933 Probable pectinesterase/pectinesterase inhibitor
Probab=99.91 E-value=2.6e-23 Score=189.27 Aligned_cols=128 Identities=23% Similarity=0.376 Sum_probs=111.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC--CCChhhhhhHHHHHHHHHHhHHHHHHHHHHHhccccCCccccchh
Q 028904 62 KSNPKTLANTALNITLKATKSTSRMMVKMSRIP--GMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMG 139 (202)
Q Consensus 62 ~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~--~~~~~~~~~aL~dC~el~~~a~d~L~~a~~al~~~~~~~~~~~~~ 139 (202)
..+|.+|++.+|+++++++..+...+.++.... +.+++++ .|++||+|+|++++++|++++..|+.. ...++
T Consensus 48 ~~~~~~L~~aaL~vtl~~a~~a~~~vs~L~~~~~~~l~~r~~-~Al~DC~El~~davd~L~~S~~~l~~~-----~~~~~ 121 (530)
T PLN02933 48 TKTIPELIIADLNLTILKVNLASSNFSDLQTRLGPNLTHRER-CAFEDCLGLLDDTISDLTTAISKLRSS-----SPEFN 121 (530)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhhc-----ccchh
Confidence 478999999999999999999999999886532 4678899 999999999999999999999998742 13479
Q ss_pred hHHHHHHHhhcchhhHhhccCCCC------CCchhHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 028904 140 DVQTWVSAALTYEDTCVDGLQGRP------LNGYTKTMIRRHILKVAHLTSNALALINSYAA 195 (202)
Q Consensus 140 d~~twLSAAlt~~~TC~Dgf~~~~------~~~~~~~~v~~~~~~~~~L~snaLAi~~~~~~ 195 (202)
|++|||||||||++||+|||.+.+ .++.+++.|.+.+.++.+|+||+|||++.++.
T Consensus 122 Dv~TWLSAALT~q~TC~DGF~~~~~~~~~~~~~~vk~~v~~~l~~v~~LtSNALAlv~~ls~ 183 (530)
T PLN02933 122 DVSMLLSNAMTNQDTCLDGFSTSDNENNNDMTYELPENLKESILDISNHLSNSLAMLQNISG 183 (530)
T ss_pred HHHHHHHHHhcchhhHhhhhhccCccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999998654 12357889999999999999999999998765
No 21
>PLN02488 probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=9.6e-23 Score=183.89 Aligned_cols=151 Identities=19% Similarity=0.205 Sum_probs=126.6
Q ss_pred hcccCCCCChhhHHHHhhhhh----cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHH----H
Q 028904 38 RTSCSGTIYRRLCYRSLSVYA----AKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADC----I 109 (202)
Q Consensus 38 ~~~C~~T~yp~~C~~sL~~~p----~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC----~ 109 (202)
..+|..++||+.|...++... .....++..++.++++.++.++..+...+..+....+.+++++ .|++|| +
T Consensus 2 ~~~c~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~-~a~~dc~~~c~ 80 (509)
T PLN02488 2 IGVCKGYDDKQSCQNLLLELKTVSSSLSEMRCRDLLIIVLKNSVWRIDMAMIGVMEDTKLLEEMENDM-LGVKEDTNLFE 80 (509)
T ss_pred ceecCCCCChHHHHHHHHhhhccccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhchhhh-hhHHHhHHHHH
Confidence 358999999999999887765 3334568999999999999999999999988876442267888 999999 9
Q ss_pred HHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 028904 110 EVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALAL 189 (202)
Q Consensus 110 el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi 189 (202)
|+|++++++|++++..+...+.... ...+|++||||||||||+||.|||.+ +.++..|...+.++.+|+||+|||
T Consensus 81 el~~~~~~~l~~s~~~~~~~~~~~~-~~~~d~~twLSa~lt~q~TC~dg~~~----~~~~~~~~~~l~~~~~~~sn~La~ 155 (509)
T PLN02488 81 EMMESAKDRMIRSVEELLGGESPNL-GSYENVHTWLSGVLTSYITCIDEIGE----GAYKRRVEPELEDLISRARVALAI 155 (509)
T ss_pred HHHHHHHHHHHHHHHHhhccccccc-CcHHHHHHHHHHhHhchhhHhccccC----cchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999964321121 23589999999999999999999953 257888999999999999999999
Q ss_pred HHhhh
Q 028904 190 INSYA 194 (202)
Q Consensus 190 ~~~~~ 194 (202)
+..++
T Consensus 156 ~~~~~ 160 (509)
T PLN02488 156 FISIS 160 (509)
T ss_pred hcccc
Confidence 98765
No 22
>PLN02201 probable pectinesterase/pectinesterase inhibitor
Probab=99.89 E-value=1.6e-22 Score=184.21 Aligned_cols=126 Identities=21% Similarity=0.393 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHHHHHhHHHHHHHHHHHhccccCCc--cccchhhHH
Q 028904 65 PKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMDELGHIRNSN--FWLTMGDVQ 142 (202)
Q Consensus 65 ~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~el~~~a~d~L~~a~~al~~~~~~~--~~~~~~d~~ 142 (202)
+..++++++++++++++.+...+.++... ..+++++ .|++||+|++++++|+|++++.+|+...... .....+|++
T Consensus 37 ~~~~~~~~L~~tl~~a~~a~~~vs~l~~~-~~~~r~~-~Al~DC~ELl~davD~L~~Sl~eL~~~~~~~~~~~~~~~Dvq 114 (520)
T PLN02201 37 PPSEFVSSLKTTVDVIRKVVSIVSQFDKV-FGDSRLS-NAISDCLDLLDFAAEELSWSISASQNPNGKDNSTGDVGSDLR 114 (520)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChhHH-HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHH
Confidence 46788889999999999999999888653 3468888 9999999999999999999999997432111 134579999
Q ss_pred HHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 028904 143 TWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINSYA 194 (202)
Q Consensus 143 twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~~~~~ 194 (202)
||||||||||+||+|||.+.+ +.+++.|...+.++.+|+||+|||++...
T Consensus 115 TWLSAALTnq~TClDGF~~~~--~~~k~~v~~~l~nvt~LtSNaLALv~~~~ 164 (520)
T PLN02201 115 TWLSAALSNQDTCIEGFDGTN--GIVKKLVAGSLSQVGSTVRELLTMVHPPP 164 (520)
T ss_pred HHHHhhhcchhhhhhhhhccc--cchhHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 999999999999999998753 45788899999999999999999998744
No 23
>PLN02170 probable pectinesterase/pectinesterase inhibitor
Probab=99.88 E-value=3.9e-22 Score=181.25 Aligned_cols=131 Identities=24% Similarity=0.235 Sum_probs=101.4
Q ss_pred CChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHHHHHhHHHHHHHHHH
Q 028904 45 IYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQDSMD 124 (202)
Q Consensus 45 ~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~el~~~a~d~L~~a~~ 124 (202)
+||+.|+.+|++... +-|..+...+++..+.. + +... ... .. .|++||+|+|++++++|.++++
T Consensus 58 ~~~~~~~~~~s~~~~---~~~~~~~~~~~~~~~~~---~------~~~~--~~~-~~-~Al~DC~ELlddavd~L~~S~~ 121 (529)
T PLN02170 58 PSSSSKQGFLSSVQE---SMNHALFARSLAFNLTL---S------HRTV--QTH-TF-DPVNDCLELLDDTLDMLSRIVV 121 (529)
T ss_pred CCcchhhhhhhhhhc---cChHHHHHhhhHhhhhh---h------hhhc--ccc-hh-HHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999997644 33666777777665541 1 1111 112 24 8999999999999999999996
Q ss_pred HhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 028904 125 ELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINSYAAGS 197 (202)
Q Consensus 125 al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~~~~~~~~ 197 (202)
.... .+..+|++||||||||||+||.|||++.+....++..|...+.++.+|+||+|||++.+...+
T Consensus 122 ~~~~------~~~~~DvqTWLSAALTnq~TClDGf~~~~~~~~~~~~~~~~l~nv~eLtSNALALv~~~~~~~ 188 (529)
T PLN02170 122 IKHA------DHDEEDVHTWLSAALTNQETCEQSLQEKSSSYKHGLAMDFVARNLTGLLTNSLDLFVSVKSKH 188 (529)
T ss_pred hhcc------ccchhHHHHHHHHHHhchhhHhhhhhccCccchhHHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence 5432 256899999999999999999999987654445667788888999999999999999877553
No 24
>PLN02916 pectinesterase family protein
Probab=99.70 E-value=1.1e-16 Score=145.16 Aligned_cols=80 Identities=28% Similarity=0.454 Sum_probs=68.0
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHH
Q 028904 103 GAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHL 182 (202)
Q Consensus 103 ~aL~dC~el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L 182 (202)
.|++||+|+|++++++|.+++..+.. ...+|++||||||||||+||.|||.+... .. ...+.++.+|
T Consensus 63 ~Al~DC~ELl~dSvd~L~~Sl~~~~~-------~~~~DvqTWLSAALTnq~TClDGf~~~~~---~~---~~~v~nvt~l 129 (502)
T PLN02916 63 EALSDCEKLYDESEARLSKLLVSHEN-------FTVEDARTWLSGVLANHHTCLDGLEQKGQ---GH---KPMAHNVTFV 129 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcc-------CchHHHHHHHHHHHhCHhHHHHhhhhccc---cc---hHHHHHHHHH
Confidence 79999999999999999999987653 24799999999999999999999986531 12 2346799999
Q ss_pred HHHHHHHHHhhhc
Q 028904 183 TSNALALINSYAA 195 (202)
Q Consensus 183 ~snaLAi~~~~~~ 195 (202)
+||+|||++.+..
T Consensus 130 tSNaLAlv~~~~~ 142 (502)
T PLN02916 130 LSEALALYKKSRG 142 (502)
T ss_pred HHHHHHHhhhhhh
Confidence 9999999988765
No 25
>KOG1733 consensus Mitochondrial import inner membrane translocase, subunit TIM13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=66.37 E-value=45 Score=23.83 Aligned_cols=50 Identities=10% Similarity=0.244 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHH-----hhcCCC--CChhhhhhHHHHHHHHHHhHHHHHHHHHH
Q 028904 74 NITLKATKSTSRMMVK-----MSRIPG--MIPRETAGAVADCIEVIGDSIDELQDSMD 124 (202)
Q Consensus 74 ~~a~~~~~~a~~~v~~-----l~~~~~--~~~~~~~~aL~dC~el~~~a~d~L~~a~~ 124 (202)
+++..++.+....+.. -...+| .++..+ .|++.|.+-|.+|-.-+.++..
T Consensus 29 qlAvAnAqeLv~kisekCf~KCit~PGssl~~~e~-~Cis~CmdRyMdawniVSrty~ 85 (97)
T KOG1733|consen 29 QLAVANAQELVSKISEKCFDKCITKPGSSLDSSEK-SCISRCMDRYMDAWNIVSRTYI 85 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCcccCcchH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555544432 122343 467788 9999999999999888887743
No 26
>PF07870 DUF1657: Protein of unknown function (DUF1657); InterPro: IPR012452 This domain appears to be restricted to the Bacillales.
Probab=57.47 E-value=45 Score=20.88 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCChhhhhhHHHHHHHHHHhHHHHHH
Q 028904 75 ITLKATKSTSRMMVKMSRIPGMIPRETAGAVADCIEVIGDSIDELQ 120 (202)
Q Consensus 75 ~a~~~~~~a~~~v~~l~~~~~~~~~~~~~aL~dC~el~~~a~d~L~ 120 (202)
.++..++++.+....+.-.. .++..+ ..+..|.+.++..+++|+
T Consensus 4 q~lAslK~~qA~Le~fal~T-~d~~AK-~~y~~~a~~l~~ii~~L~ 47 (50)
T PF07870_consen 4 QTLASLKKAQADLETFALQT-QDQEAK-QMYEQAAQQLEEIIQDLE 47 (50)
T ss_pred HHHHHHHHHHhhHHHHHhhc-CCHHHH-HHHHHHHHHHHHHHHHhH
Confidence 34455566666666655422 467777 889999888888888775
No 27
>PRK00442 tatA twin arginine translocase protein A; Provisional
Probab=53.84 E-value=14 Score=26.48 Aligned_cols=17 Identities=35% Similarity=0.700 Sum_probs=14.6
Q ss_pred hhHHHHHHHHHHHHHHh
Q 028904 6 LRHTLVALLIILLEFST 22 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (202)
..|++||++++++.|-.
T Consensus 6 ~~elliIlvIvlllFG~ 22 (92)
T PRK00442 6 WKHWIVILVVVVLVFGT 22 (92)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 67999999999998864
No 28
>PRK00191 tatA twin arginine translocase protein A; Provisional
Probab=48.35 E-value=19 Score=25.32 Aligned_cols=21 Identities=19% Similarity=0.267 Sum_probs=15.2
Q ss_pred CCccchhHHHHHHHHHHHHHHh
Q 028904 1 MEGSFLRHTLVALLIILLEFST 22 (202)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~ 22 (202)
|+-+ ..|++||++++++.|-.
T Consensus 1 m~ig-~~ElliI~vI~lllFGp 21 (84)
T PRK00191 1 MSLG-PWEIGIIVLLIIVLFGA 21 (84)
T ss_pred CCCc-HHHHHHHHHHHHHHhcc
Confidence 5666 45888888888877753
No 29
>PRK01470 tatA twin arginine translocase protein A; Provisional
Probab=47.55 E-value=20 Score=22.75 Aligned_cols=20 Identities=45% Similarity=0.672 Sum_probs=13.6
Q ss_pred CCccchhHHHHHHHHHHHHHH
Q 028904 1 MEGSFLRHTLVALLIILLEFS 21 (202)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (202)
|+-+ ..|++|+++++++.|-
T Consensus 1 mgig-~~elliI~vi~llvFG 20 (51)
T PRK01470 1 MGMS-FSHLLIVLLIIFVLFG 20 (51)
T ss_pred CCCC-HHHHHHHHHHHHHhcC
Confidence 4555 4688887777777664
No 30
>PRK00720 tatA twin arginine translocase protein A; Provisional
Probab=46.09 E-value=23 Score=24.56 Aligned_cols=17 Identities=35% Similarity=0.634 Sum_probs=14.2
Q ss_pred hhHHHHHHHHHHHHHHh
Q 028904 6 LRHTLVALLIILLEFST 22 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (202)
..|++|++++++++|-.
T Consensus 6 ~~ellIIlvIvlllFG~ 22 (78)
T PRK00720 6 IWHWLIVLAVVLLLFGR 22 (78)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 57999999999998863
No 31
>PF11172 DUF2959: Protein of unknown function (DUF2959); InterPro: IPR021342 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.
Probab=44.10 E-value=1.4e+02 Score=24.40 Aligned_cols=86 Identities=19% Similarity=0.200 Sum_probs=54.3
Q ss_pred cccCCCCChhhHHHHhhhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC-hhhhhhHHHHHHHHHHhHHH
Q 028904 39 TSCSGTIYRRLCYRSLSVYAAKIKSNPKTLANTALNITLKATKSTSRMMVKMSRIPGMI-PRETAGAVADCIEVIGDSID 117 (202)
Q Consensus 39 ~~C~~T~yp~~C~~sL~~~p~s~~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~~~-~~~~~~aL~dC~el~~~a~d 117 (202)
.-|+ +.|+..|.. +.-..+..-.|..+=++-+.+-+.++...++..++.+....|.+ ...+ ..|++=.|.-..+.+
T Consensus 5 ~gCq-saYY~amEk-vG~hKRdilvdrVe~Ardsq~eaqeQF~sALe~f~sl~~~~ggdLe~~Y-~~ln~~ye~s~~~A~ 81 (201)
T PF11172_consen 5 TGCQ-SAYYSAMEK-VGVHKRDILVDRVEDARDSQQEAQEQFKSALEQFKSLVNFDGGDLEDKY-NALNDEYESSEDAAE 81 (201)
T ss_pred HHhH-HHHHHHHHH-hCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHHH-HHHHHHHHHHHHHHH
Confidence 3576 668888877 44444444467777788889999999999999888887755443 2233 444444444444444
Q ss_pred HHHHHHHHhc
Q 028904 118 ELQDSMDELG 127 (202)
Q Consensus 118 ~L~~a~~al~ 127 (202)
.+.+-+.++.
T Consensus 82 ~V~~RI~~vE 91 (201)
T PF11172_consen 82 EVSDRIDAVE 91 (201)
T ss_pred HHHHHHHHHH
Confidence 5554444443
No 32
>PRK01614 tatE twin arginine translocase protein A; Validated
Probab=41.75 E-value=29 Score=24.39 Aligned_cols=17 Identities=35% Similarity=0.540 Sum_probs=14.1
Q ss_pred hhHHHHHHHHHHHHHHh
Q 028904 6 LRHTLVALLIILLEFST 22 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (202)
..|++|++++++++|-.
T Consensus 6 ~~ELLIIlvIvLLLFG~ 22 (85)
T PRK01614 6 ITKLLVVGILIVLLFGT 22 (85)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 56999999999888864
No 33
>PRK03554 tatA twin arginine translocase protein A; Provisional
Probab=41.63 E-value=29 Score=24.63 Aligned_cols=17 Identities=29% Similarity=0.550 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHHHHh
Q 028904 6 LRHTLVALLIILLEFST 22 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (202)
..|++||+++++|.|-.
T Consensus 6 ~~eLlIIlvIvLLlFG~ 22 (89)
T PRK03554 6 IWQLLIIAVIVVLLFGT 22 (89)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 56899999998888864
No 34
>PF02953 zf-Tim10_DDP: Tim10/DDP family zinc finger; InterPro: IPR004217 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule. Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents a putative zinc binding domain with four conserved cysteine residues. Members of this family include subunits 8, 9, 10 and 13 of the mitochondrial inner membrane translocase complex, which are involved in mitochondrial protein import [, ]. Defects in TIM8 are the cause of 2 human syndromes: Mohr-Tranebjaerg syndrome (MTS) [MIM:304700]; also known as dystonia-deafness syndrome (DDS) or X-linked progressive deafness type 1 (DFN-1). It is a recessive neurodegenerative syndrome characterised by postlingual progressive sensorineural deafness as the first presenting symptom in early childhood, followed by progressive dystonia, spasticity, dysphagia, mental deterioration, paranoia and cortical blindness. Jensen syndrome [MIM:311150]; also known as opticoacoustic nerve atrophy with dementia. This X-linked disease is characterised by deafness, blindness and muscle weakness. The small alpha helical proteins Tim8 and Tim13 assemble into a hexameric complex which can bind Tim23 as its substrate and chaperone the hydrophobic Tim23 across the aqueous membrane space []. More information on zinc fingers can be found at Protein of the Month: Zinc Fingers [].; GO: 0006626 protein targeting to mitochondrion, 0045039 protein import into mitochondrial inner membrane, 0042719 mitochondrial intermembrane space protein transporter complex; PDB: 2BSK_B 3CJH_A 3DXR_A.
Probab=41.49 E-value=74 Score=20.62 Aligned_cols=29 Identities=10% Similarity=0.355 Sum_probs=23.0
Q ss_pred CChhhhhhHHHHHHHHHHhHHHHHHHHHHH
Q 028904 96 MIPRETAGAVADCIEVIGDSIDELQDSMDE 125 (202)
Q Consensus 96 ~~~~~~~~aL~dC~el~~~a~d~L~~a~~a 125 (202)
.+..+. .++..|.+-|-++-..+.+.+..
T Consensus 37 L~~~E~-~Ci~~C~~ky~~~~~~v~~~~~~ 65 (66)
T PF02953_consen 37 LSSKEE-SCIDNCVDKYIDTNQFVSKRFQQ 65 (66)
T ss_dssp --HHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhHH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 467788 99999999999998888776653
No 35
>PF11714 Inhibitor_I53: Thrombin inhibitor Madanin ; InterPro: IPR021716 Members of this family are the peptidase inhibitor madanin proteins. These proteins were isolated from tick saliva [].
Probab=39.96 E-value=28 Score=23.62 Aligned_cols=16 Identities=13% Similarity=0.289 Sum_probs=13.0
Q ss_pred hHHHHHHHHHHHHHHh
Q 028904 7 RHTLVALLIILLEFST 22 (202)
Q Consensus 7 ~~~~~~~~~~~~~~~~ 22 (202)
.||+++|+++++-+|-
T Consensus 2 KhFaiLilavVaSAvV 17 (78)
T PF11714_consen 2 KHFAILILAVVASAVV 17 (78)
T ss_pred chHHHHHHHHHHHHHH
Confidence 5999999998886655
No 36
>PF11395 DUF2873: Protein of unknown function (DUF2873); InterPro: IPR021532 This entry is represented by the human SARS coronavirus, Orf7b; it is a family of uncharacterised viral proteins.
Probab=38.87 E-value=34 Score=20.28 Aligned_cols=15 Identities=33% Similarity=0.519 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHh
Q 028904 8 HTLVALLIILLEFST 22 (202)
Q Consensus 8 ~~~~~~~~~~~~~~~ 22 (202)
-|+|+|.+++.+|+.
T Consensus 18 lflv~imliif~f~l 32 (43)
T PF11395_consen 18 LFLVIIMLIIFWFSL 32 (43)
T ss_pred HHHHHHHHHHHHHHH
Confidence 366777778889987
No 37
>PRK04598 tatA twin arginine translocase protein A; Provisional
Probab=38.78 E-value=35 Score=23.84 Aligned_cols=17 Identities=29% Similarity=0.550 Sum_probs=13.7
Q ss_pred hhHHHHHHHHHHHHHHh
Q 028904 6 LRHTLVALLIILLEFST 22 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (202)
..|++||+++|+++|-.
T Consensus 6 ~~elliIlvivlllFG~ 22 (81)
T PRK04598 6 IWQLLIIAVIVVLLFGT 22 (81)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 56888888888888864
No 38
>PRK04561 tatA twin arginine translocase protein A; Provisional
Probab=34.63 E-value=45 Score=22.93 Aligned_cols=17 Identities=53% Similarity=0.786 Sum_probs=13.6
Q ss_pred hhHHHHHHHHHHHHHHh
Q 028904 6 LRHTLVALLIILLEFST 22 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (202)
..|++|+++++++.|-.
T Consensus 6 ~~ellIIlvIvlLlFG~ 22 (75)
T PRK04561 6 IWHWLVVLVIVLLVFGT 22 (75)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 46899998888888864
No 39
>PF01093 Clusterin: Clusterin; InterPro: IPR000753 Clusterin is a vertebrate glycoprotein [], the exact function of which is not yet clear. Clusterin expression is complex, appearing as different forms in different cell compartments. One set of proteins is directed for secretion, and other clusterin species are expressed in the cytoplasm and nucleus. The secretory form of the clusterin protein (sCLU) is targeted to the ER by an initial leader peptide. This ~60kDa pre-sCLU protein is further glycosylated and proteolytically cleaved into alpha- and beta-subunits, held together by disulphide bonds. External sCLU is an 80kDa protein and may act as a molecular chaperone, scavenging denatured proteins outside cells following specific stress-induced injury such as heat shock. sCLU possesses nonspecific binding activity to hydrophobic domains of various proteins in vitro []. A specific nuclear form of CLU (nCLU) acts as a pro-death signal, inhibiting cell growth and survival. The nCLU protein has two coiled-coil domains, one at its N terminus that is unable to bind Ku70, and a C-terminal coiled-coil domain that is uniquely able to associate with Ku70 and is minimally required for cell death. Clusterin is synthesized as a precursor polypeptide of about 400 amino acids which is post-translationally cleaved to form two subunits of about 200 amino acids each. The two subunits are linked by five disulphide bonds to form an antiparallel ladder-like structure []. In each of the mature subunits the five cysteines that are involved in disulphide bonds are clustered in domains of about 30 amino acids located in the central part of the subunits. This entry represents the clusterin precursor and related proteins.; GO: 0008219 cell death
Probab=34.61 E-value=1.8e+02 Score=26.77 Aligned_cols=91 Identities=7% Similarity=0.069 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCC-C---hhhhhhHHHHHHHHHHhHHHHHHHHHHHhccccC---CccccchhhHH
Q 028904 70 NTALNITLKATKSTSRMMVKMSRIPGM-I---PRETAGAVADCIEVIGDSIDELQDSMDELGHIRN---SNFWLTMGDVQ 142 (202)
Q Consensus 70 ~~ai~~a~~~~~~a~~~v~~l~~~~~~-~---~~~~~~aL~dC~el~~~a~d~L~~a~~al~~~~~---~~~~~~~~d~~ 142 (202)
...=+..-+++++|+.-|+.+...... . .... ..|+-|.+-.++|+...++.-+.|..... ......-+.-+
T Consensus 8 ~~GekyvdeEik~Al~GvKqMK~~Mek~eeeh~~Lm-~tL~k~kk~KeeAl~l~~e~e~kLee~e~~Cn~sm~~lWeECk 86 (436)
T PF01093_consen 8 EQGEKYVDEEIKNALNGVKQMKTMMEKTEEEHKELM-KTLEKSKKEKEEALKLANEVEEKLEEEEEVCNESMMALWEECK 86 (436)
T ss_pred HhCchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344445555565555554432111 1 1233 68999999999999988888888775311 00111123344
Q ss_pred HHH-HHhhcchh-hHhhccCC
Q 028904 143 TWV-SAALTYED-TCVDGLQG 161 (202)
Q Consensus 143 twL-SAAlt~~~-TC~Dgf~~ 161 (202)
-.| +..|.++. ||..||.-
T Consensus 87 pCL~~tCm~FYt~tCr~g~~~ 107 (436)
T PF01093_consen 87 PCLKQTCMRFYTRTCRSGSGL 107 (436)
T ss_pred HHHHHHhHHHHhcccCCCchh
Confidence 444 45677776 99998853
No 40
>PRK02958 tatA twin arginine translocase protein A; Provisional
Probab=34.52 E-value=45 Score=22.80 Aligned_cols=17 Identities=41% Similarity=0.737 Sum_probs=13.7
Q ss_pred hhHHHHHHHHHHHHHHh
Q 028904 6 LRHTLVALLIILLEFST 22 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (202)
..|++|+++++++.|-.
T Consensus 6 ~~elliIl~IvlllFG~ 22 (73)
T PRK02958 6 IWHWLIVLVIVVLVFGT 22 (73)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 56899998888888864
No 41
>PF10360 DUF2433: Protein of unknown function (DUF2433); InterPro: IPR018829 This entry represents a conserved domain of 120 residues from a family fungal proteins. Their function is not known.
Probab=31.74 E-value=58 Score=24.90 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHhhhcC
Q 028904 179 VAHLTSNALALINSYAAG 196 (202)
Q Consensus 179 ~~~L~snaLAi~~~~~~~ 196 (202)
-++|..++|.++.+++..
T Consensus 49 q~~LL~~AL~v~~kiP~~ 66 (132)
T PF10360_consen 49 QRNLLENALSVFDKIPIS 66 (132)
T ss_pred HHHHHHHHHHHHHhCCCC
Confidence 688999999999999877
No 42
>PRK01833 tatA twin arginine translocase protein A; Provisional
Probab=29.44 E-value=63 Score=22.17 Aligned_cols=17 Identities=35% Similarity=0.567 Sum_probs=14.0
Q ss_pred hhHHHHHHHHHHHHHHh
Q 028904 6 LRHTLVALLIILLEFST 22 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (202)
..|++|+++++++.|-.
T Consensus 6 ~~elliIl~i~lllFG~ 22 (74)
T PRK01833 6 IWQLLIIVAIIVLLFGT 22 (74)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 56899999988888865
No 43
>KOG4514 consensus Uncharacterized conserved protein [Function unknown]
Probab=27.18 E-value=2.5e+02 Score=22.79 Aligned_cols=58 Identities=19% Similarity=0.396 Sum_probs=35.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-CChhhhhhHHHHHHHHHHhHHHHHHHHHHH
Q 028904 62 KSNPKTLANTALNITLKATKSTSRMMVKMSRIPG-MIPRETAGAVADCIEVIGDSIDELQDSMDE 125 (202)
Q Consensus 62 ~~d~~~L~~~ai~~a~~~~~~a~~~v~~l~~~~~-~~~~~~~~aL~dC~el~~~a~d~L~~a~~a 125 (202)
..||.-|..+-. ..+...+.++.+...-| .-.... .---+|++.|.++++.|.+++.+
T Consensus 121 ~vDp~VL~DlE~-----~~~el~~~vD~llr~lgg~lh~is-~lt~~~vq~yr~aV~kl~d~~Da 179 (222)
T KOG4514|consen 121 EVDPSVLSDLEL-----EAQELASSVDNLLRNLGGLLHSIS-SLTADNVQVYRNAVNKLTDTLDA 179 (222)
T ss_pred CCChHHHHHHHH-----HHHHHHHHHHHHHHHhhhHHHHHH-HhhhhHHHHHHHHHHHHHHHhhh
Confidence 457766655332 33444444555544322 222333 44569999999999999998876
No 44
>PF10792 DUF2605: Protein of unknown function (DUF2605); InterPro: IPR019728 This entry represents a protein conserved in Cyanobacteria. The function is not known.
Probab=26.78 E-value=1.9e+02 Score=20.98 Aligned_cols=56 Identities=14% Similarity=0.133 Sum_probs=45.9
Q ss_pred chhhHHHHHHHhhcchhhHhhccCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 028904 137 TMGDVQTWVSAALTYEDTCVDGLQGRPLNGYTKTMIRRHILKVAHLTSNALALINSYAAG 196 (202)
Q Consensus 137 ~~~d~~twLSAAlt~~~TC~Dgf~~~~~~~~~~~~v~~~~~~~~~L~snaLAi~~~~~~~ 196 (202)
-.+|-+.|.+-...--++|.+.|-.. +-...+..+++...+-+.-+-++++...+-
T Consensus 15 LLeDF~yWF~Rs~~LLe~e~~~fls~----~eQ~~Ll~Rv~qaq~ev~aa~~Lf~At~~q 70 (98)
T PF10792_consen 15 LLEDFQYWFSRSRELLETEPISFLSP----EEQSDLLERVKQAQQEVNAARALFQATDGQ 70 (98)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccCCH----HHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 35799999999999999999999753 346778889999999998888888765443
No 45
>COG1826 TatA Sec-independent protein secretion pathway components [Intracellular trafficking and secretion]
Probab=26.13 E-value=53 Score=23.30 Aligned_cols=16 Identities=31% Similarity=0.544 Sum_probs=12.7
Q ss_pred hhHHHHHHHHHHHHHH
Q 028904 6 LRHTLVALLIILLEFS 21 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~ 21 (202)
..|++|+++++++.|-
T Consensus 6 ~~elliIlvV~lllfG 21 (94)
T COG1826 6 WSELLIILVVALLVFG 21 (94)
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5788888888888775
No 46
>PF08287 DASH_Spc19: Spc19; InterPro: IPR013251 Spc19 is a component of the DASH complex. The DASH complex associates with the spindle pole body and is important for spindle and kinetochore integrity during cell division [, ].
Probab=23.61 E-value=1.8e+02 Score=22.65 Aligned_cols=25 Identities=24% Similarity=0.514 Sum_probs=15.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHhccc
Q 028904 105 VADCIEVIGDSIDELQDSMDELGHI 129 (202)
Q Consensus 105 L~dC~el~~~a~d~L~~a~~al~~~ 129 (202)
|++|+.-+..++..|+.++..|..+
T Consensus 2 L~~cV~SL~~S~~lL~~Si~~L~~~ 26 (153)
T PF08287_consen 2 LSNCVSSLRSSVQLLQSSIETLDSG 26 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4566666666666666666666543
No 47
>PF14290 DUF4370: Domain of unknown function (DUF4370)
Probab=23.53 E-value=4.1e+02 Score=22.00 Aligned_cols=59 Identities=17% Similarity=0.089 Sum_probs=46.2
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhccccCCccccchhhHHHHHHHhhcchhhHhhccCCC
Q 028904 103 GAVADCIEVIGDSIDELQDSMDELGHIRNSNFWLTMGDVQTWVSAALTYEDTCVDGLQGR 162 (202)
Q Consensus 103 ~aL~dC~el~~~a~d~L~~a~~al~~~~~~~~~~~~~d~~twLSAAlt~~~TC~Dgf~~~ 162 (202)
.|-+-|.|.+.. +..|.-+++.+-+....+...-.+..+.-|-++..-..+-+|.|...
T Consensus 131 RAAeAvEeFgG~-L~tLrm~idDl~GlsGEnv~PLP~~~~~Al~t~y~rY~~YL~sFgp~ 189 (239)
T PF14290_consen 131 RAAEAVEEFGGI-LVTLRMEIDDLCGLSGENVKPLPDYIENALRTAYKRYMTYLDSFGPD 189 (239)
T ss_pred HHHHHHHHhhhh-HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHhcCch
Confidence 567778777766 88899998888776666665566777778888888888999999753
No 48
>TIGR01411 tatAE twin arginine-targeting protein translocase, TatA/E family. This model distinguishes TatA/E from the related TatB, but does not distinguish TatA from TatE. The Tat (twin-arginine translocation) system is a Sec-independent exporter for folded proteins, often with a redox cofactor already bound, across the bacterial inner membrane. Functionally equivalent systems are found in the chloroplast and some in archaeal species. The signal peptide recognized by the Tat system is modeled by TIGR01409.
Probab=22.01 E-value=81 Score=19.48 Aligned_cols=15 Identities=40% Similarity=0.618 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHHH
Q 028904 7 RHTLVALLIILLEFS 21 (202)
Q Consensus 7 ~~~~~~~~~~~~~~~ 21 (202)
.|++|+++++++.|-
T Consensus 5 ~ElliI~vi~llvfG 19 (47)
T TIGR01411 5 PEWLIILVVILLLFG 19 (47)
T ss_pred HHHHHHHHHHHHhcC
Confidence 467777776666663
No 49
>PF04108 APG17: Autophagy protein Apg17 ; InterPro: IPR007240 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. Autophagy protein 17 (Apg17) is required for activating Apg1 protein kinases. This entry also contains Autophagy protein 11 which is involved in cytoplasm to vacuole transport (Cvt) and pexophagy. ; GO: 0006914 autophagy
Probab=21.76 E-value=5.6e+02 Score=23.09 Aligned_cols=23 Identities=17% Similarity=-0.067 Sum_probs=15.8
Q ss_pred hHHHhcccCCCCChhhHHHHhhh
Q 028904 34 IEYIRTSCSGTIYRRLCYRSLSV 56 (202)
Q Consensus 34 ~~~i~~~C~~T~yp~~C~~sL~~ 56 (202)
.++++-.=+-|.|++.|+..+.-
T Consensus 206 ~ema~lL~sLt~HfDqC~~a~~~ 228 (412)
T PF04108_consen 206 QEMASLLESLTNHFDQCVTAVRH 228 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455568899999987763
No 50
>KOG4841 consensus Dolichol-phosphate mannosyltransferase, subunit 3 [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=21.73 E-value=78 Score=22.43 Aligned_cols=26 Identities=15% Similarity=0.371 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHhcc
Q 028904 103 GAVADCIEVIGDSIDELQDSMDELGH 128 (202)
Q Consensus 103 ~aL~dC~el~~~a~d~L~~a~~al~~ 128 (202)
.-.+||.|.+-+-+.++++|.++|++
T Consensus 65 ATfnDc~eA~veL~~~IkEAr~~L~r 90 (95)
T KOG4841|consen 65 ATFNDCEEAAVELQSQIKEARADLAR 90 (95)
T ss_pred eccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999985
No 51
>PRK03625 tatE twin arginine translocase protein E; Validated
Probab=21.14 E-value=1e+02 Score=20.72 Aligned_cols=17 Identities=29% Similarity=0.507 Sum_probs=13.0
Q ss_pred hhHHHHHHHHHHHHHHh
Q 028904 6 LRHTLVALLIILLEFST 22 (202)
Q Consensus 6 ~~~~~~~~~~~~~~~~~ 22 (202)
..|++|+++++++.|-.
T Consensus 6 ~~elliIlvI~lllFGp 22 (67)
T PRK03625 6 ITKLLVVAALVVLLFGT 22 (67)
T ss_pred HHHHHHHHHHHHHHcCc
Confidence 46888888888887754
Done!