BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028908
(202 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LIG6|NIFU4_ARATH NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4
PE=2 SV=1
Length = 283
Score = 368 bits (944), Expect = e-101, Method: Compositional matrix adjust.
Identities = 172/202 (85%), Positives = 186/202 (92%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSDF 60
MFIQTQ TPNPSSLMFYPGKPVMEVGSADFPN R+A+ SPLAKS+Y +DG+ RVFFGSDF
Sbjct: 80 MFIQTQSTPNPSSLMFYPGKPVMEVGSADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDF 139
Query: 61 ITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKEL 120
+TVTKS+D SWD+LKPEIFAA+MDFYSSGQPLFLDS+ AAAKDTAI+EDDSETVAMIKEL
Sbjct: 140 VTVTKSDDVSWDILKPEIFAAVMDFYSSGQPLFLDSQAAAAKDTAISEDDSETVAMIKEL 199
Query: 121 LETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPE 180
LETRIRPAVQDDGGDIEY GFDPE+G VKLRMQGACSGCPSSSVTLKSGIENMLMHYV E
Sbjct: 200 LETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSE 259
Query: 181 VKSVEQELDAEDEVATLAGQME 202
VK VEQE D EDE TL+G+M
Sbjct: 260 VKGVEQEFDGEDEEGTLSGEMR 281
>sp|Q9C8J2|NIFU5_ARATH NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5
PE=2 SV=1
Length = 275
Score = 346 bits (888), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 162/202 (80%), Positives = 183/202 (90%), Gaps = 1/202 (0%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSDF 60
MFIQTQ TPNPSSLMF PGKPVME+GSADFPN+R+AM+SPLAK+++ +DG+ RVF+GSDF
Sbjct: 75 MFIQTQSTPNPSSLMFSPGKPVMEIGSADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDF 134
Query: 61 ITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKEL 120
+TVTKS+D +WD+LKP+IFA +MDFYSSGQPLFLDS+ AAKDTAI+EDDSETVAMIKEL
Sbjct: 135 VTVTKSDDVTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKEL 194
Query: 121 LETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPE 180
LETRIRP+VQDDGGDIEY GFD ETG VKLRMQGACSGCPSSSVTLKSGIENMLMHYV E
Sbjct: 195 LETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSE 254
Query: 181 VKSVEQELDAEDEVATLAGQME 202
VK VEQE D E+E T +G ME
Sbjct: 255 VKGVEQEFDGEEE-GTSSGPME 275
>sp|Q8SY96|NFU1_DROME NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1
Length = 283
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 144/195 (73%), Gaps = 5/195 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFPN A NSPLAK L+ V+G+ VFFG+D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
F+T++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKE
Sbjct: 127 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMMIKE 184
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 185 LLDTRIRPTVQEDGGDIVFMGY--EGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 242
Query: 180 EVKSVEQELDAEDEV 194
EV+SVEQ D D +
Sbjct: 243 EVESVEQVFDEADRM 257
>sp|B3MRT7|NFU1_DROAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila ananassae GN=GF20932 PE=3 SV=1
Length = 286
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/196 (59%), Positives = 145/196 (73%), Gaps = 5/196 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFP+ A SPLAK L+ V+G+ VFFG+D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVEVLGKGNTHDFPSGTTAHGSPLAKLLFRVEGVRAVFFGAD 126
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
FIT++K E W L+KPE+FA IMDF++SG P+ +S A DT I EDD ETV MIKE
Sbjct: 127 FITISKEEGAEWSLIKPEVFAVIMDFFASGLPILHESTPNA--DTEILEDDDETVMMIKE 184
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 185 LLDTRIRPTVQEDGGDIVFMGY--ENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 242
Query: 180 EVKSVEQELDAEDEVA 195
EV+SVEQ DA D++A
Sbjct: 243 EVESVEQVFDAVDKMA 258
>sp|B4JWR9|NFU1_DROGR NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila grimshawi GN=GH17809 PE=3 SV=1
Length = 298
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 118/197 (59%), Positives = 146/197 (74%), Gaps = 5/197 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFP+A AA SPLAK L+ V+G+ VFFGSD
Sbjct: 79 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSATAAHCSPLAKLLFRVEGVRAVFFGSD 138
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
FIT++K E+ W L+KPE+FA IMDF++SG P+ ++ A DT I EDD ETV MIKE
Sbjct: 139 FITISKEENGEWGLIKPEVFAVIMDFFASGLPILHEARPNA--DTEILEDDDETVMMIKE 196
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + + E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 197 LLDTRIRPTVQEDGGDIVFISY--EKGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 254
Query: 180 EVKSVEQELDAEDEVAT 196
EV+SVEQ D D+VA
Sbjct: 255 EVESVEQVFDEVDKVAN 271
>sp|Q9QZ23|NFU1_MOUSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus
musculus GN=Nfu1 PE=1 SV=2
Length = 255
Score = 233 bits (595), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 114/193 (59%), Positives = 147/193 (76%), Gaps = 4/193 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSDF 60
MFIQTQ TPNP+SL F PGKPV+E + DFP AA SPLA+ L+ ++G+ VFFG DF
Sbjct: 57 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 116
Query: 61 ITVTK-SEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
ITVTK +E+ W+LLKP+I+A IMDF++SG PL + ET A +E+D E VAMIKE
Sbjct: 117 ITVTKENEELDWNLLKPDIYATIMDFFASGLPL-VTEETPPPPGEAGSEEDDEVVAMIKE 175
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGD+ YRGF E G V+L++QG+C+ CPSS +TLKSGI+NML Y+P
Sbjct: 176 LLDTRIRPTVQEDGGDVIYRGF--EDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIP 233
Query: 180 EVKSVEQELDAED 192
EV+ VEQ +D ++
Sbjct: 234 EVEGVEQVMDDDE 246
>sp|B4PZ52|NFU1_DROYA NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila yakuba GN=GE15286 PE=3 SV=1
Length = 283
Score = 233 bits (594), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 144/196 (73%), Gaps = 5/196 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFPN A +SPLAK L+ V+G+ VFFG+D
Sbjct: 67 MFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
F+T++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKE
Sbjct: 127 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMMIKE 184
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 185 LLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 242
Query: 180 EVKSVEQELDAEDEVA 195
EV+SVEQ D D +
Sbjct: 243 EVESVEQVFDEADRMV 258
>sp|B4IMF6|NFU1_DROSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila sechellia GN=GM13534 PE=3 SV=1
Length = 283
Score = 233 bits (594), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/195 (59%), Positives = 144/195 (73%), Gaps = 5/195 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFPN A +SPLAK L+ V+G+ VFFG+D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
FIT++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKE
Sbjct: 127 FITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMMIKE 184
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 185 LLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 242
Query: 180 EVKSVEQELDAEDEV 194
EV+SVEQ D D +
Sbjct: 243 EVESVEQVFDEADRM 257
>sp|B3NYF7|NFU1_DROER NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila erecta GN=GG17526 PE=3 SV=1
Length = 283
Score = 233 bits (594), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 144/195 (73%), Gaps = 5/195 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFPN A +SPLAK L+ V+G+ VFFG+D
Sbjct: 67 MFIQTQDTPNPDSLKFLPGVDVLGKGNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
F+T++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKE
Sbjct: 127 FVTISKQEGAEWSLIKPEVFAVIMDFFASGLPVLHDAQPNA--DTEILEDDDETVMMIKE 184
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 185 LLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 242
Query: 180 EVKSVEQELDAEDEV 194
EV+SVEQ D D +
Sbjct: 243 EVESVEQVFDEADRM 257
>sp|B4NE93|NFU1_DROWI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila willistoni GN=GK25604 PE=3 SV=1
Length = 289
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 144/196 (73%), Gaps = 5/196 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ VFFGSD
Sbjct: 68 MFIQTQDTPNPESLKFLPGVEVLGKGNTYDFPSVAAAHCSPLAKLLFRVEGVRSVFFGSD 127
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
FIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I EDD ETV MIKE
Sbjct: 128 FITISKEEAAEWGLIKPEVFAVIMDFFASGLPILHEARNNA--DTEILEDDDETVMMIKE 185
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + +D G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 186 LLDTRIRPTVQEDGGDIVFMSYD--NGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 243
Query: 180 EVKSVEQELDAEDEVA 195
EV+SVEQ D D++A
Sbjct: 244 EVESVEQVFDEADKMA 259
>sp|B4R3T1|NFU1_DROSI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila simulans GN=GD15490 PE=3 SV=1
Length = 283
Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/195 (58%), Positives = 144/195 (73%), Gaps = 5/195 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFP+ A +SPLAK L+ V+G+ VFFG+D
Sbjct: 67 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPHGTTAHSSPLAKLLFRVEGVKGVFFGAD 126
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
FIT++K E W L+KPE+FA IMDF++SG P+ D++ A DT I EDD ETV MIKE
Sbjct: 127 FITISKQEGAEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA--DTEILEDDDETVMMIKE 184
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 185 LLDTRIRPTVQEDGGDIVFMGY--EAGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 242
Query: 180 EVKSVEQELDAEDEV 194
EV+SVEQ D D +
Sbjct: 243 EVESVEQVFDEADRM 257
>sp|B4M375|NFU1_DROVI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila virilis GN=GJ19011 PE=3 SV=1
Length = 298
Score = 230 bits (587), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 144/197 (73%), Gaps = 5/197 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ VFFG D
Sbjct: 75 MFIQTQDTPNPESLKFLPGVDVLGKGNTYDFPSGSAAHCSPLAKLLFRVEGVRAVFFGGD 134
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
FIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I EDD ETV MIKE
Sbjct: 135 FITISKEESGEWGLIKPEVFAVIMDFFASGLPVIHEARPNA--DTEILEDDDETVMMIKE 192
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + G+ E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 193 LLDTRIRPTVQEDGGDIVFMGY--ENGIVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 250
Query: 180 EVKSVEQELDAEDEVAT 196
EV+SVEQ D D++A
Sbjct: 251 EVESVEQVFDDADKMAN 267
>sp|Q9UMS0|NFU1_HUMAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Homo
sapiens GN=NFU1 PE=1 SV=2
Length = 254
Score = 229 bits (584), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 113/194 (58%), Positives = 149/194 (76%), Gaps = 6/194 (3%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSDF 60
MFIQTQ TPNP+SL F PGKPV+E + DFP AA SPLA+ L+ ++G+ VFFG DF
Sbjct: 59 MFIQTQDTPNPNSLKFIPGKPVLETRTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDF 118
Query: 61 ITVTK-SEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
ITVTK +E+ W+LLKP+I+A IMDF++SG PL + ET + + A +E+D E VAMIKE
Sbjct: 119 ITVTKENEELDWNLLKPDIYATIMDFFASGLPL-VTEETPSGE--AGSEEDDEVVAMIKE 175
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGD+ Y+GF E G V+L++QG+C+ CPSS +TLK+GI+NML Y+P
Sbjct: 176 LLDTRIRPTVQEDGGDVIYKGF--EDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIP 233
Query: 180 EVKSVEQELDAEDE 193
EV+ VEQ +D E +
Sbjct: 234 EVEGVEQVMDDESD 247
>sp|B4H303|NFU1_DROPE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila persimilis GN=GL13432 PE=3 SV=1
Length = 282
Score = 228 bits (580), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 143/196 (72%), Gaps = 5/196 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ VFFGSD
Sbjct: 63 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSD 122
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
FIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I +DD ETV MIKE
Sbjct: 123 FITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEARPNA--DTEILDDDDETVMMIKE 180
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + + E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 181 LLDTRIRPTVQEDGGDIVFISY--ENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 238
Query: 180 EVKSVEQELDAEDEVA 195
EV+SVEQ D D +A
Sbjct: 239 EVESVEQVFDDADRMA 254
>sp|B5DKJ8|NFU1_DROPS NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila pseudoobscura pseudoobscura GN=GA22888
PE=3 SV=1
Length = 286
Score = 227 bits (578), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/196 (58%), Positives = 143/196 (72%), Gaps = 5/196 (2%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVMEVGSA-DFPNARAAMNSPLAKSLYGVDGITRVFFGSD 59
MFIQTQ TPNP SL F PG V+ G+ DFP+ AA SPLAK L+ V+G+ VFFGSD
Sbjct: 67 MFIQTQDTPNPDSLKFLPGVEVLGKGNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSD 126
Query: 60 FITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKE 119
FIT++K E W L+KPE+FA IMDF++SG P+ ++ A DT I +DD ETV MIKE
Sbjct: 127 FITISKEESAEWSLIKPEVFAVIMDFFASGLPILHEARPNA--DTEILDDDDETVMMIKE 184
Query: 120 LLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVP 179
LL+TRIRP VQ+DGGDI + + E G VKL+MQG+CS CPSS VTLK+G++NML Y+P
Sbjct: 185 LLDTRIRPTVQEDGGDIVFISY--ENGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIP 242
Query: 180 EVKSVEQELDAEDEVA 195
EV+SVEQ D D +A
Sbjct: 243 EVESVEQVFDDVDRMA 258
>sp|Q9UUB8|YH9J_SCHPO NifU-like protein C1709.19c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC1709.19c PE=3 SV=1
Length = 260
Score = 219 bits (558), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 144/197 (73%), Gaps = 2/197 (1%)
Query: 1 MFIQTQPTPNPSSLMFYPGKPVM--EVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGS 58
++I+++ TPN ++L F PG ++ +GS +F + +NSPLA+ L+ +DG+ +FFG
Sbjct: 43 IWIRSEETPNENALKFLPGLDILPPTIGSCEFMRGQGTVNSPLAQKLFDIDGVDSIFFGK 102
Query: 59 DFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIK 118
DFITV+K T W +KPE+F+ IM+ S+G P+ + A DT I E DS+ VAMIK
Sbjct: 103 DFITVSKGAGTEWAQMKPEVFSVIMEHLSNGSPVLSEEPLKGASDTQILESDSQIVAMIK 162
Query: 119 ELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYV 178
EL+ET IRP++Q+DGGD+E+RGFD +TGTV L+++GAC C SS+VTLK+GI+ ML HY+
Sbjct: 163 ELIETSIRPSIQEDGGDVEFRGFDEKTGTVSLKLRGACRTCSSSAVTLKNGIQQMLKHYI 222
Query: 179 PEVKSVEQELDAEDEVA 195
PEV++V Q LD E+EVA
Sbjct: 223 PEVENVVQVLDPEEEVA 239
>sp|P32860|NFU1_YEAST NifU-like protein, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NFU1 PE=1 SV=2
Length = 256
Score = 146 bits (369), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 19/214 (8%)
Query: 1 MFIQTQPTPNPSSLMFYP--GKPVMEVGSADF----PNARAAMNSPLAKSLY-GVDGITR 53
+ I+T TPN ++L F G+ + GS + +S LA+ ++ G+
Sbjct: 22 IHIKTLTTPNENALKFLSTDGEMLQTRGSKSIVIKNTDENLINHSKLAQQIFLQCPGVES 81
Query: 54 VFFGSDFITVTKSEDTSWDLLKPEIFAAIMDFYSSGQPLFLDSETAAAKDTA-------- 105
+ G DF+T+ K W+ +KPEI + + G+ + A ++
Sbjct: 82 LMIGDDFLTINKDRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGGYKINM 141
Query: 106 ----INEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPS 161
+ E+D E +I+EL++TRIRPA+ +DGGDI+YRG+DP+TGTV LR+QGAC+ C S
Sbjct: 142 PKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSS 201
Query: 162 SSVTLKSGIENMLMHYVPEVKSVEQELDAEDEVA 195
S VTLK GIE+ML HYV EVK V Q +D E E+A
Sbjct: 202 SEVTLKYGIESMLKHYVDEVKEVIQIMDPEQEIA 235
>sp|Q84RQ7|NIFU3_ARATH NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3
PE=2 SV=1
Length = 236
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 125 IRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
+RP++ DGG++ D V L++QGAC CPSSS+TLK GIE+ L +PE+ SV
Sbjct: 96 VRPSLMADGGNVALHEIDGLV--VVLKLQGACGSCPSSSMTLKMGIESRLRDKIPEIMSV 153
Query: 185 EQELDAE 191
EQ L++E
Sbjct: 154 EQFLESE 160
>sp|Q93W20|NIFU2_ARATH NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2
PE=1 SV=1
Length = 235
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 9/110 (8%)
Query: 85 FYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLET---RIRPAVQDDGGDIEYRGF 141
F SS Q LF S+ A T D V + +E +E+ IRP + DGG++
Sbjct: 58 FLSSRQ-LFRRSKVVKAVATP---DPILEVPLTEENVESVLDEIRPYLMSDGGNVALHEI 113
Query: 142 DPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVEQELDAE 191
D V++++QGAC CPSS++T+K GIE LM +PE+ +VE D E
Sbjct: 114 D--GNIVRVKLQGACGSCPSSTMTMKMGIERRLMEKIPEIVAVEALPDEE 161
>sp|Q84LK7|NIFU1_ORYSJ NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=NIFU1 PE=1 SV=1
Length = 226
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 124 RIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKS 183
++RP + DGGD+ + V+L++QGAC CPSS +T+K GIE LM +P+V +
Sbjct: 86 QVRPYLTADGGDVAL--HEIAGNVVRLKLQGACGSCPSSLITIKRGIERRLMEKIPDVAA 143
Query: 184 VEQELDAE 191
VE D E
Sbjct: 144 VEPVTDKE 151
>sp|P33179|NIFU_ANASL Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain
L31) GN=nifU PE=3 SV=1
Length = 112
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 81 AIMDFYSSGQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRG 140
A+ + + G L + + K N + +A+I+++L+ +RP + DGGD+E
Sbjct: 11 AVTNLNTKGVNLTKEIANSGQKRALTN---VQKIALIQKVLDEEVRPVLIADGGDVEL-- 65
Query: 141 FDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYV 178
+D + VK+ +QGAC CPSS+ TLK IE+ L +
Sbjct: 66 YDVDGDIVKVVLQGACGSCPSSTATLKIAIESRLRDRI 103
>sp|O32119|YUTI_BACSU Putative nitrogen fixation protein YutI OS=Bacillus subtilis
(strain 168) GN=yutI PE=3 SV=1
Length = 111
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 3/59 (5%)
Query: 117 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLM 175
++E+L+ ++RP + DGGD E D + G VKLR+ GAC CPSS++TLK+GIE L+
Sbjct: 43 VQEVLD-KLRPFLLRDGGDCEL--VDVDEGIVKLRLLGACGSCPSSTITLKAGIERALL 98
>sp|P20628|NIFU_NOSS1 Nitrogen fixation protein NifU OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=nifU PE=3 SV=1
Length = 300
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 112 ETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIE 171
+ +A+I+++L+ +RP + DGGD+E +D + VK+ +QGAC C SS+ TLK IE
Sbjct: 227 QKIALIQKVLDEEVRPVLIADGGDVEL--YDVDGDIVKVVLQGACGSCSSSTATLKIAIE 284
Query: 172 NML 174
+ L
Sbjct: 285 SRL 287
>sp|Q43885|NIFU_TRIAZ Nitrogen fixation protein NifU OS=Trichormus azollae GN=nifU PE=3
SV=1
Length = 300
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 112 ETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIE 171
+ +A+I+++L+ +RP + DGGD+E +D + VK+ +QGAC C SS+ TLK IE
Sbjct: 227 QKIALIQKVLDEEVRPVLIADGGDVEL--YDVDGDIVKVVLQGACGSCSSSTATLKIAIE 284
Query: 172 NML 174
+ L
Sbjct: 285 SRL 287
>sp|B4SPV3|NFUA_STRM5 Fe/S biogenesis protein NfuA OS=Stenotrophomonas maltophilia
(strain R551-3) GN=nfuA PE=3 SV=1
Length = 199
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 109 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKS 168
D + V + ++E I P + GG + + E G V LR G C GC + VTLK
Sbjct: 105 DAASLVERVHWVVENEINPQLASHGGKVAVQEVSAE-GVVLLRFGGGCQGCGMADVTLKQ 163
Query: 169 GIENMLMHYVPEVKSVEQELD 189
GIE LM VP V +V D
Sbjct: 164 GIEKTLMGRVPGVTAVRDATD 184
>sp|B2FM87|NFUA_STRMK Fe/S biogenesis protein NfuA OS=Stenotrophomonas maltophilia
(strain K279a) GN=nfuA PE=3 SV=1
Length = 199
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 109 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKS 168
D + V + ++E I P + GG + + E G V LR G C GC + VTLK
Sbjct: 105 DAASLVERVHWVVENEINPQLASHGGKVAVQEVSAE-GVVLLRFGGGCQGCGMADVTLKQ 163
Query: 169 GIENMLMHYVPEVKSVEQELD 189
GIE LM VP V +V D
Sbjct: 164 GIEKTLMGRVPGVTAVRDATD 184
>sp|Q056Z1|NFUA_BUCCC Fe/S biogenesis protein NfuA OS=Buchnera aphidicola subsp. Cinara
cedri (strain Cc) GN=nfuA PE=3 SV=1
Length = 193
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 117 IKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH 176
IK L T+I P + GG + ++G V L+ G C+GC +TLK GIE L+
Sbjct: 113 IKNFLTTQINPKLLLHGGSVALYDI-TDSGVVFLKFSGGCNGCSMIDITLKKGIEKKLIK 171
Query: 177 YVPEVKSVE 185
PE+ SVE
Sbjct: 172 NFPEISSVE 180
>sp|Q8PKQ2|NFUA_XANAC Fe/S biogenesis protein NfuA OS=Xanthomonas axonopodis pv. citri
(strain 306) GN=nfuA PE=3 SV=1
Length = 199
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 114 VAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENM 173
V ++ ++E I P + GG + + E G V LR G C GC + VTLK GIE
Sbjct: 110 VERVRWVVENEINPQLASHGGRVAVQEVSAE-GVVLLRFGGGCHGCGMADVTLKQGIEKT 168
Query: 174 LMHYVPEVKSVEQELD 189
LM VP V +V D
Sbjct: 169 LMGRVPGVTAVRDATD 184
>sp|C4K405|NFUA_HAMD5 Fe/S biogenesis protein NfuA OS=Hamiltonella defensa subsp.
Acyrthosiphon pisum (strain 5AT) GN=nfuA PE=3 SV=1
Length = 191
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 25/170 (14%)
Query: 18 PGKPVMEVGSADFPNARAAMNSPLAKSLYGVDGITRVFFGSDFITVTKSEDTSWDLLKPE 77
PGKP E G + P A S+ D + S F+ + P
Sbjct: 32 PGKPTAECGVSYCP----------ADSVESADTHLKFNLFSVFVDPISA---------PY 72
Query: 78 IFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGD 135
+ A +DF + G L L + A + A DD+ + + +L+++I P + + GG
Sbjct: 73 LNEAAIDFVTDELGSQLTLKAPNAKVRKVA---DDAPLIERVDYVLQSQINPQLANHGGR 129
Query: 136 IEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSVE 185
+ + V L+ G C+GC VTLK GIE L+ PE+K V+
Sbjct: 130 VTLMEITDDAFAV-LQFGGGCNGCSMVDVTLKEGIEKELLQQFPELKGVK 178
>sp|B0RTH4|NFUA_XANCB Fe/S biogenesis protein NfuA OS=Xanthomonas campestris pv.
campestris (strain B100) GN=nfuA PE=3 SV=1
Length = 199
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 109 DDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKS 168
+ + V ++ ++E I P + GG + + E G V LR G C GC + VTLK
Sbjct: 105 ESASMVECVRWVVENEINPQLASHGGRVAVQEVSAE-GVVLLRFGGGCHGCGMADVTLKQ 163
Query: 169 GIENMLMHYVPEVKSVEQELD 189
GIE LM VP V +V D
Sbjct: 164 GIEKTLMGRVPGVIAVRDATD 184
>sp|Q93W77|NIFU1_ARATH NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1
PE=1 SV=1
Length = 231
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 119 ELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMH-Y 177
+L+ +RP + DGG+++ E G V L++QGAC+ CPSSS T+ GIE +L +
Sbjct: 91 DLVLEDVRPFLISDGGNVDV--VSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLKEKF 148
Query: 178 VPEVKSVEQELDAE 191
+K + Q D E
Sbjct: 149 GDALKDIRQVFDEE 162
>sp|Q00241|NIFU_PLEBO Nitrogen fixation protein NifU (Fragment) OS=Plectonema boryanum
GN=nifU PE=3 SV=1
Length = 205
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 110 DSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSG 169
+ + +A+I+++L+ +RP + DGGD+E +D + VK+ ++GAC C SS+ TLK
Sbjct: 130 NVQKIALIQKVLDEEVRPVLIADGGDVEL--YDVDGDFVKVTLKGACGSCASSTATLKDA 187
Query: 170 IENML 174
+E L
Sbjct: 188 VEAKL 192
>sp|P40432|YVN2_AZOVI Uncharacterized 10.3 kDa protein in vnfA 5'region OS=Azotobacter
vinelandii PE=3 SV=1
Length = 96
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 5/85 (5%)
Query: 94 LDSETAAAKDTAINEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGTVKLRMQ 153
LD+E A AI +E++ +++E +E R+RP VQ DGGD+E + V+LR++
Sbjct: 6 LDTEENATT-LAITPIPAESLPLVRETVE-RLRPGVQRDGGDLELVAV--QDNIVRLRLK 61
Query: 154 GACSGCPSSSVTLKSGIENMLMHYV 178
GAC GC S+ TL G+ L+ +
Sbjct: 62 GACVGCAMSAQTL-GGVRRELVKVL 85
>sp|Q3YWL1|NFUA_SHISS Fe/S biogenesis protein NfuA OS=Shigella sonnei (strain Ss046)
GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|P63023|NFUA_SHIFL Fe/S biogenesis protein NfuA OS=Shigella flexneri GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q0SZQ1|NFUA_SHIF8 Fe/S biogenesis protein NfuA OS=Shigella flexneri serotype 5b
(strain 8401) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q32AM7|NFUA_SHIDS Fe/S biogenesis protein NfuA OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q31VL8|NFUA_SHIBS Fe/S biogenesis protein NfuA OS=Shigella boydii serotype 4 (strain
Sb227) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B2U3M4|NFUA_SHIB3 Fe/S biogenesis protein NfuA OS=Shigella boydii serotype 18 (strain
CDC 3083-94 / BS512) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B7LSB7|NFUA_ESCF3 Fe/S biogenesis protein NfuA OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q1R5M0|NFUA_ECOUT Fe/S biogenesis protein NfuA OS=Escherichia coli (strain UTI89 /
UPEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B1LHL4|NFUA_ECOSM Fe/S biogenesis protein NfuA OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B6I2X8|NFUA_ECOSE Fe/S biogenesis protein NfuA OS=Escherichia coli (strain SE11)
GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B7NE19|NFUA_ECOLU Fe/S biogenesis protein NfuA OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|P63020|NFUA_ECOLI Fe/S biogenesis protein NfuA OS=Escherichia coli (strain K12)
GN=nfuA PE=1 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|B1IP51|NFUA_ECOLC Fe/S biogenesis protein NfuA OS=Escherichia coli (strain ATCC 8739
/ DSM 1576 / Crooks) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|P63021|NFUA_ECOL6 Fe/S biogenesis protein NfuA OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|Q0TC53|NFUA_ECOL5 Fe/S biogenesis protein NfuA OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|A1AGT8|NFUA_ECOK1 Fe/S biogenesis protein NfuA OS=Escherichia coli O1:K1 / APEC
GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
>sp|A8A5M2|NFUA_ECOHS Fe/S biogenesis protein NfuA OS=Escherichia coli O9:H4 (strain HS)
GN=nfuA PE=3 SV=1
Length = 191
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 72 DLLKPEIFAAIMDFYSS--GQPLFLDSETAAAKDTAINEDDSETVAMIKELLETRIRPAV 129
+L P + A +DF + G L L + A + A DD+ + ++ +L+++I P +
Sbjct: 67 ELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA---DDAPLMERVEYMLQSQINPQL 123
Query: 130 QDDGGDIEYRGFDPETGTVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPEVKSV 184
GG + E G L+ G C+GC VTLK GIE L++ PE+K V
Sbjct: 124 AGHGGRVSLMEI-TEDGYAILQFGGGCNGCSMVDVTLKEGIEKQLLNEFPELKGV 177
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,522,780
Number of Sequences: 539616
Number of extensions: 3073174
Number of successful extensions: 7034
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 6669
Number of HSP's gapped (non-prelim): 234
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)