Your job contains 1 sequence.
>028910
MQSAAYKPRFPSFTCSEPALLGGKMVTFRFHQYQVVGRALPTEKDEHPKIYRMKLWATNE
VRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEY
RDTTLNGAVEQMYTEMASRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSKIKFPLVFK
KVRPPTRKLKTTYKASRPNLFM
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028910
(202 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040914 - symbol:AT2G34480 species:3702 "Arabi... 884 1.6e-88 1
TAIR|locus:2089516 - symbol:AT3G14600 species:3702 "Arabi... 872 2.9e-87 1
TAIR|locus:1005716700 - symbol:AT1G29965 species:3702 "Ar... 859 6.9e-86 1
TAIR|locus:2198269 - symbol:RPL18AA "60S ribosomal protei... 851 4.9e-85 1
DICTYBASE|DDB_G0285881 - symbol:rpl18a "S60 ribosomal pro... 505 2.3e-48 1
UNIPROTKB|F1NPD3 - symbol:RPL18A "60S ribosomal protein L... 490 8.8e-47 1
UNIPROTKB|Q3T003 - symbol:RPL18A "60S ribosomal protein L... 485 3.0e-46 1
UNIPROTKB|E2RL34 - symbol:RPL18A "60S ribosomal protein L... 485 3.0e-46 1
UNIPROTKB|Q02543 - symbol:RPL18A "60S ribosomal protein L... 485 3.0e-46 1
UNIPROTKB|F1S935 - symbol:RPL18A "Uncharacterized protein... 485 3.0e-46 1
MGI|MGI:1924058 - symbol:Rpl18a "ribosomal protein L18A" ... 483 4.8e-46 1
RGD|1302976 - symbol:Rpl18a "ribosomal protein L18A" spec... 483 4.8e-46 1
UNIPROTKB|P62718 - symbol:Rpl18a "60S ribosomal protein L... 483 4.8e-46 1
UNIPROTKB|J9NVM6 - symbol:RPL18A "60S ribosomal protein L... 480 1.0e-45 1
ZFIN|ZDB-GENE-040426-1071 - symbol:rpl18a "ribosomal prot... 478 1.6e-45 1
FB|FBgn0010409 - symbol:RpL18A "Ribosomal protein L18A" s... 473 5.6e-45 1
WB|WBGene00004432 - symbol:rpl-20 species:6239 "Caenorhab... 464 5.0e-44 1
GENEDB_PFALCIPARUM|PF13_0224 - symbol:PF13_0224 "60S ribo... 458 2.2e-43 1
UNIPROTKB|Q8IDS6 - symbol:PF13_0224 "60S ribosomal protei... 458 2.2e-43 1
RGD|1565566 - symbol:RGD1565566 "similar to 60S ribosomal... 451 1.2e-42 1
SGD|S000004855 - symbol:RPL20A "Ribosomal 60S subunit pro... 440 1.7e-41 1
SGD|S000005839 - symbol:RPL20B "Ribosomal 60S subunit pro... 440 1.7e-41 1
UNIPROTKB|G4N6U9 - symbol:MGG_03653 "60S ribosomal protei... 439 2.2e-41 1
CGD|CAL0003667 - symbol:RPL20B species:5476 "Candida albi... 437 3.6e-41 1
UNIPROTKB|Q5AML4 - symbol:RPL20B "60S ribosomal protein L... 437 3.6e-41 1
POMBASE|SPAC26A3.04 - symbol:rpl2002 "60S ribosomal prote... 426 5.3e-40 1
POMBASE|SPAC3A12.10 - symbol:rpl2001 "60S ribosomal prote... 426 5.3e-40 1
UNIPROTKB|B4DM74 - symbol:RPL18A "60S ribosomal protein L... 410 2.6e-38 1
UNIPROTKB|F1MHJ6 - symbol:F1MHJ6 "60S ribosomal protein L... 404 1.1e-37 1
ASPGD|ASPL0000056380 - symbol:AN0433 species:162425 "Emer... 354 2.3e-32 1
UNIPROTKB|F1M6F8 - symbol:F1M6F8 "60S ribosomal protein L... 269 2.3e-23 1
>TAIR|locus:2040914 [details] [associations]
symbol:AT2G34480 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009664 "plant-type cell wall organization" evidence=RCA]
[GO:0042545 "cell wall modification" evidence=RCA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 EnsemblPlants:AT2G34480.1 GO:GO:0005886
GO:GO:0005774 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006412
GO:GO:0003735 EMBL:AC004077 EMBL:AC004481 GO:GO:0022625
EMBL:AY042803 EMBL:AY120778 EMBL:BT000076 EMBL:BT006559 EMBL:Z18039
IPI:IPI00548475 PIR:T02335 RefSeq:NP_180995.1 UniGene:At.23545
ProteinModelPortal:P51418 SMR:P51418 IntAct:P51418 STRING:P51418
PaxDb:P51418 PRIDE:P51418 GeneID:818011 KEGG:ath:AT2G34480
TAIR:At2g34480 eggNOG:COG2157 HOGENOM:HOG000211377
InParanoid:P51418 KO:K02882 OMA:KSRYWYF PhylomeDB:P51418
ProtClustDB:CLSN2683643 Genevestigator:P51418 GermOnline:AT2G34480
PANTHER:PTHR10052 Uniprot:P51418
Length = 178
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 164/178 (92%), Positives = 172/178 (96%)
Query: 25 MVTFRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 84
M FRFHQYQVVGRALPTEKD PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60
Query: 85 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 144
LAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR
Sbjct: 61 LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 145 PCIQIIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 202
PCIQII+TAT+PAKLCKRESTKQFHNSKIKFPLVF+KVRPP+RKLKTTYKA++PNLFM
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM 178
>TAIR|locus:2089516 [details] [associations]
symbol:AT3G14600 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 EnsemblPlants:AT3G14600.1 GO:GO:0009506
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006412
GO:GO:0003735 EMBL:AB023038 GO:GO:0022625 eggNOG:COG2157
HOGENOM:HOG000211377 KO:K02882 ProtClustDB:CLSN2683643
PANTHER:PTHR10052 EMBL:AY072540 EMBL:AY097377 EMBL:AY088351
IPI:IPI00548788 RefSeq:NP_188078.1 UniGene:At.22267
ProteinModelPortal:Q9LUD4 SMR:Q9LUD4 STRING:Q9LUD4 PaxDb:Q9LUD4
PRIDE:Q9LUD4 GeneID:820688 KEGG:ath:AT3G14600 TAIR:At3g14600
InParanoid:Q9LUD4 OMA:LCKREIT PhylomeDB:Q9LUD4
Genevestigator:Q9LUD4 GermOnline:AT3G14600 Uniprot:Q9LUD4
Length = 178
Score = 872 (312.0 bits), Expect = 2.9e-87, P = 2.9e-87
Identities = 161/175 (92%), Positives = 167/175 (95%)
Query: 28 FRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAI 87
FRFHQYQVVGRALPTE DEHPKIYRMKLW NEV AKSKFWYF+RKLKKVKKSNGQMLAI
Sbjct: 4 FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAI 63
Query: 88 NEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCI 147
NEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR PCI
Sbjct: 64 NEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCI 123
Query: 148 QIIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 202
QII+TAT+PAKLCKRE TKQFHNSKIKFPLVF+KVRPP+RKLKTTYKAS+PNLFM
Sbjct: 124 QIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM 178
>TAIR|locus:1005716700 [details] [associations]
symbol:AT1G29965 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 EnsemblPlants:AT1G29965.1
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009506 GO:GO:0006412
GO:GO:0003735 GO:GO:0022625 HOGENOM:HOG000211377 KO:K02882
ProtClustDB:CLSN2683643 PANTHER:PTHR10052 UniGene:At.40639
EMBL:AY128411 EMBL:BT000059 IPI:IPI00541044 RefSeq:NP_849729.1
ProteinModelPortal:Q8L7K0 SMR:Q8L7K0 STRING:Q8L7K0 PRIDE:Q8L7K0
DNASU:839875 GeneID:839875 KEGG:ath:AT1G29965 TAIR:At1g29965
InParanoid:Q8L7K0 PhylomeDB:Q8L7K0 ArrayExpress:Q8L7K0
Genevestigator:Q8L7K0 Uniprot:Q8L7K0
Length = 178
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 159/178 (89%), Positives = 168/178 (94%)
Query: 25 MVTFRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 84
M R HQYQVVGRALPTEKDE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQM
Sbjct: 1 MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60
Query: 85 LAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRS 144
LAINEIFEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR
Sbjct: 61 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 145 PCIQIIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 202
PCIQII+TAT+PA LCKRESTKQFHNSKIKFPLVF+KVRPPTRKLKTT+KA++PNLFM
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 178
>TAIR|locus:2198269 [details] [associations]
symbol:RPL18AA "60S ribosomal protein L18A-1"
species:3702 "Arabidopsis thaliana" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005840
"ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0006914 "autophagy"
evidence=RCA] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
EMBL:CP002684 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AC022455 eggNOG:COG2157 KO:K02882 PANTHER:PTHR10052
IPI:IPI00846921 RefSeq:NP_001077626.1 UniGene:At.40639
ProteinModelPortal:A8MRF3 SMR:A8MRF3 STRING:A8MRF3 PaxDb:A8MRF3
EnsemblPlants:AT1G29970.2 GeneID:839876 KEGG:ath:AT1G29970
HOGENOM:HOG000015168 OMA:LAKSKFW ProtClustDB:CLSN2699051
Genevestigator:A8MRF3 Uniprot:A8MRF3
Length = 312
Score = 851 (304.6 bits), Expect = 4.9e-85, P = 4.9e-85
Identities = 157/172 (91%), Positives = 166/172 (96%)
Query: 31 HQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 90
HQYQVVGRALPTEKDE PKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQMLAINEI
Sbjct: 141 HQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQMLAINEI 200
Query: 91 FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQII 150
FEKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQII
Sbjct: 201 FEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQII 260
Query: 151 RTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLFM 202
+TAT+PA LCKRESTKQFHNSKIKFPLVF+KVRPPTRKLKTT+KA++PNLFM
Sbjct: 261 KTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM 312
>DICTYBASE|DDB_G0285881 [details] [associations]
symbol:rpl18a "S60 ribosomal protein L18a"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190
dictyBase:DDB_G0285881 GenomeReviews:CM000153_GR GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000082 eggNOG:COG2157
KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052 RefSeq:XP_637982.2
ProteinModelPortal:Q54MK8 STRING:Q54MK8 PRIDE:Q54MK8
EnsemblProtists:DDB0233692 GeneID:8625334 KEGG:ddi:DDB_G0285881
ProtClustDB:CLSZ2447207 Uniprot:Q54MK8
Length = 171
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 96/171 (56%), Positives = 124/171 (72%)
Query: 31 HQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 90
H++QVVGR +PTE+D +PKIYRM+L+A + AKS+FWYFL K+ K+KKS G++L + EI
Sbjct: 4 HEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNVTEI 63
Query: 91 FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQII 150
FE P K+KN+G+++RY SR+G HN+YKEYRD T GAV QMY EMASRH R I II
Sbjct: 64 FEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIHII 123
Query: 151 RTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A L +R +TKQFH+SKIKFPL + K K+T+ A+RPN F
Sbjct: 124 DIKEIAASLTRRANTKQFHDSKIKFPLTHR-----IAKSKSTFVANRPNTF 169
>UNIPROTKB|F1NPD3 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
OMA:KSRYWYF PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
EMBL:AADN02009919 IPI:IPI00594850 Ensembl:ENSGALT00000015981
Uniprot:F1NPD3
Length = 182
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 91/184 (49%), Positives = 127/184 (69%)
Query: 18 PALLGGKMVTFRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKV 77
P L V+ + +Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+
Sbjct: 1 PRLTPLSFVSLQLREYKVVGRCLPTPKCRTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKM 60
Query: 78 KKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMA 137
KKS+G+++ +++EK P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M
Sbjct: 61 KKSSGEIVYCGQVYEKTPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMG 120
Query: 138 SRHRVRSPCIQIIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASR 197
+RHR R+ IQI++ I A C+R + KQFH+SKIKFPL + +R R+ K + R
Sbjct: 121 ARHRARAHSIQIMKVEQIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKR 177
Query: 198 PNLF 201
PN F
Sbjct: 178 PNTF 181
>UNIPROTKB|Q3T003 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9913
"Bos taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 EMBL:BC102624 IPI:IPI00707386
RefSeq:NP_001028791.1 UniGene:Bt.49052 ProteinModelPortal:Q3T003
SMR:Q3T003 STRING:Q3T003 PRIDE:Q3T003 Ensembl:ENSBTAT00000021033
GeneID:404142 KEGG:bta:404142 CTD:6142 GeneTree:ENSGT00390000015797
HOVERGEN:HBG066281 InParanoid:Q3T003 OrthoDB:EOG40P47V
NextBio:20817578 Uniprot:Q3T003
Length = 176
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 89/170 (52%), Positives = 123/170 (72%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|E2RL34 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052
CTD:6142 GeneTree:ENSGT00390000015797 EMBL:AAEX03012289
RefSeq:XP_533877.1 Ensembl:ENSCAFT00000024008 GeneID:476672
KEGG:cfa:476672 NextBio:20852289 Uniprot:E2RL34
Length = 176
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 89/170 (52%), Positives = 123/170 (72%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 9 EYKVVGRCLPTPKCRTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|Q02543 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9606
"Homo sapiens" [GO:0006412 "translation" evidence=NAS;TAS]
[GO:0003735 "structural constituent of ribosome" evidence=NAS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006413 "translational initiation" evidence=TAS] [GO:0006414
"translational elongation" evidence=TAS] [GO:0006415 "translational
termination" evidence=TAS] [GO:0006614 "SRP-dependent
cotranslational protein targeting to membrane" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0019058 "viral infectious cycle" evidence=TAS] [GO:0019083
"viral transcription" evidence=TAS] [GO:0044267 "cellular protein
metabolic process" evidence=TAS] Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_17015 InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723
GO:GO:0003735 GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 eggNOG:COG2157
HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052
CTD:6142 HOVERGEN:HBG066281 EMBL:L05093 EMBL:X80822 EMBL:AC005796
EMBL:BC007512 EMBL:BC066319 EMBL:BC071920 IPI:IPI00026202
PIR:S47353 RefSeq:NP_000971.1 UniGene:Hs.337766
ProteinModelPortal:Q02543 SMR:Q02543 IntAct:Q02543
MINT:MINT-5000271 STRING:Q02543 PhosphoSite:Q02543 DMDM:730538
SWISS-2DPAGE:Q02543 PaxDb:Q02543 PeptideAtlas:Q02543 PRIDE:Q02543
DNASU:6142 Ensembl:ENST00000222247 GeneID:6142 KEGG:hsa:6142
UCSC:uc002nhp.2 GeneCards:GC19P017970 HGNC:HGNC:10311 MIM:604178
neXtProt:NX_Q02543 PharmGKB:PA34680 InParanoid:Q02543
GenomeRNAi:6142 NextBio:23861 ArrayExpress:Q02543 Bgee:Q02543
CleanEx:HS_RPL18A Genevestigator:Q02543 GermOnline:ENSG00000105640
Uniprot:Q02543
Length = 176
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 89/170 (52%), Positives = 123/170 (72%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|F1S935 [details] [associations]
symbol:RPL18A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 GO:GO:0022625
OMA:KSRYWYF PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
EMBL:CU463003 Ensembl:ENSSSCT00000015175 Uniprot:F1S935
Length = 224
Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 89/170 (52%), Positives = 123/170 (72%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 57 EYKVVGRCLPTPKCRTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 116
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 117 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 176
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 177 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 223
>MGI|MGI:1924058 [details] [associations]
symbol:Rpl18a "ribosomal protein L18A" species:10090 "Mus
musculus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 MGI:MGI:1924058 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882
OMA:KSRYWYF PANTHER:PTHR10052 CTD:6142 GeneTree:ENSGT00390000015797
HOVERGEN:HBG066281 OrthoDB:EOG40P47V EMBL:AK010983 EMBL:AK146543
EMBL:AK161942 EMBL:AK162047 EMBL:BC037146 IPI:IPI00162790
RefSeq:NP_084027.1 UniGene:Mm.379251 UniGene:Mm.431334
ProteinModelPortal:P62717 SMR:P62717 STRING:P62717
PhosphoSite:P62717 PaxDb:P62717 PRIDE:P62717
Ensembl:ENSMUST00000054220 GeneID:76808 KEGG:mmu:76808
UCSC:uc009mca.2 InParanoid:P62717 NextBio:345857 Bgee:P62717
CleanEx:MM_RPL18A Genevestigator:P62717
GermOnline:ENSMUSG00000045128 Uniprot:P62717
Length = 176
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 89/170 (52%), Positives = 123/170 (72%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>RGD|1302976 [details] [associations]
symbol:Rpl18a "ribosomal protein L18A" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA;ISO]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 RGD:1302976 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882
PANTHER:PTHR10052 CTD:6142 HOVERGEN:HBG066281 OrthoDB:EOG40P47V
EMBL:X14181 EMBL:BC058498 IPI:IPI00192257 PIR:JC4231
RefSeq:NP_997675.1 UniGene:Rn.105821 ProteinModelPortal:P62718
SMR:P62718 IntAct:P62718 STRING:P62718 PhosphoSite:P62718
PRIDE:P62718 GeneID:290641 KEGG:rno:290641 UCSC:RGD:1302976
InParanoid:P62718 NextBio:631381 ArrayExpress:P62718
Genevestigator:P62718 GermOnline:ENSRNOG00000018795 Uniprot:P62718
Length = 176
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 89/170 (52%), Positives = 123/170 (72%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|P62718 [details] [associations]
symbol:Rpl18a "60S ribosomal protein L18a" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 RGD:1302976 GO:GO:0006412 GO:GO:0003735
GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882
PANTHER:PTHR10052 CTD:6142 HOVERGEN:HBG066281 OrthoDB:EOG40P47V
EMBL:X14181 EMBL:BC058498 IPI:IPI00192257 PIR:JC4231
RefSeq:NP_997675.1 UniGene:Rn.105821 ProteinModelPortal:P62718
SMR:P62718 IntAct:P62718 STRING:P62718 PhosphoSite:P62718
PRIDE:P62718 GeneID:290641 KEGG:rno:290641 UCSC:RGD:1302976
InParanoid:P62718 NextBio:631381 ArrayExpress:P62718
Genevestigator:P62718 GermOnline:ENSRNOG00000018795 Uniprot:P62718
Length = 176
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 89/170 (52%), Positives = 123/170 (72%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 129 VEEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>UNIPROTKB|J9NVM6 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10052
GeneTree:ENSGT00390000015797 EMBL:AAEX03012236
Ensembl:ENSCAFT00000020448 OMA:TNEVRSK Uniprot:J9NVM6
Length = 176
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 88/170 (51%), Positives = 122/170 (71%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A C+R + KQFH+SKIKFPL + + R+ K + RPN F
Sbjct: 129 VEEIAASKCRRPAVKQFHDSKIKFPLPHRVLH---RQHKPRFTTKRPNTF 175
>ZFIN|ZDB-GENE-040426-1071 [details] [associations]
symbol:rpl18a "ribosomal protein L18a"
species:7955 "Danio rerio" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 ZFIN:ZDB-GENE-040426-1071
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BX890562
eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 CTD:6142 GeneTree:ENSGT00390000015797
HOVERGEN:HBG066281 OrthoDB:EOG40P47V EMBL:AL928834 EMBL:BC049045
IPI:IPI00500619 RefSeq:NP_957354.1 UniGene:Dr.51263
ProteinModelPortal:Q7ZWJ4 STRING:Q7ZWJ4 PRIDE:Q7ZWJ4
Ensembl:ENSDART00000030215 GeneID:394035 KEGG:dre:394035
InParanoid:Q7ZWJ4 NextBio:20814997 ArrayExpress:Q7ZWJ4 Bgee:Q7ZWJ4
Uniprot:Q7ZWJ4
Length = 176
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 87/170 (51%), Positives = 124/170 (72%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LP+ K+ P +YRM+++A N V AKS+FWYF+ +L+K+KK++G+++ +F
Sbjct: 9 EYKVVGRLLPSVKNPAPPLYRMRIFAPNHVVAKSRFWYFVSQLRKMKKASGEIVYCGLVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P K+KN+GIWLRY SR+G HNMY+EYRD T +GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLKVKNFGIWLRYDSRSGTHNMYREYRDLTTSGAVTQCYRDMGARHRARAHAIQIMK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 129 VQVIAANKCRRPAIKQFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 175
>FB|FBgn0010409 [details] [associations]
symbol:RpL18A "Ribosomal protein L18A" species:7227
"Drosophila melanogaster" [GO:0006412 "translation" evidence=ISS]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISS]
[GO:0003735 "structural constituent of ribosome" evidence=ISS;NAS]
[GO:0005840 "ribosome" evidence=NAS] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0051298 "centrosome duplication"
evidence=IMP] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 EMBL:AE013599 GO:GO:0051298 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0000022 eggNOG:COG2157 KO:K02882
OMA:KSRYWYF PANTHER:PTHR10052 CTD:6142 GeneTree:ENSGT00390000015797
EMBL:X75339 EMBL:AY071222 PIR:S45364 RefSeq:NP_523774.1
UniGene:Dm.669 ProteinModelPortal:P41093 SMR:P41093 DIP:DIP-19043N
IntAct:P41093 MINT:MINT-321854 STRING:P41093 PaxDb:P41093
PRIDE:P41093 EnsemblMetazoa:FBtr0086947 GeneID:36985
KEGG:dme:Dmel_CG6510 FlyBase:FBgn0010409 InParanoid:P41093
OrthoDB:EOG44XGZX PhylomeDB:P41093 ChiTaRS:RPL18A GenomeRNAi:36985
NextBio:801363 Bgee:P41093 GermOnline:CG6510 Uniprot:P41093
Length = 177
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 85/158 (53%), Positives = 119/158 (75%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LP+EK+ +Y+M+++A + + AKS+FWYFLR+LKK KK+ G++++I +++
Sbjct: 9 EYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVY 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
E +P KIKN+GIWLRY SR+G HNMY+EYRD T+ GAV Q Y +M +RHR R+ IQII+
Sbjct: 69 ETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKL 189
+IPA +R KQFH+SKIKFPLV + RKL
Sbjct: 129 VDSIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKL 166
>WB|WBGene00004432 [details] [associations]
symbol:rpl-20 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0006412 GO:GO:0000003 GO:GO:0005840 GO:GO:0003735
EMBL:FO081039 eggNOG:COG2157 HOGENOM:HOG000211377 OMA:KSRYWYF
PANTHER:PTHR10052 GeneTree:ENSGT00390000015797 PIR:B88677
PIR:T32612 ProteinModelPortal:O44480 SMR:O44480 MINT:MINT-1093825
STRING:O44480 PaxDb:O44480 EnsemblMetazoa:E04A4.8.1
EnsemblMetazoa:E04A4.8.2 UCSC:E04A4.8.1 WormBase:E04A4.8
InParanoid:O44480 NextBio:955817 Uniprot:O44480
Length = 180
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 83/169 (49%), Positives = 124/169 (73%)
Query: 31 HQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 90
++Y VVGR +PTEK+ I++M+++ATN V AKS+FWYF+ L++VKK+NG++L+I ++
Sbjct: 11 NEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGEILSIKQV 70
Query: 91 FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQII 150
FEKNP +KNYG+WL+Y SRTG+HNMY+EYRDTT+ GAV Q Y +M +RHR ++ I I+
Sbjct: 71 FEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQADRIHIL 130
Query: 151 RTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPN 199
+ T+ A+ KR K FH++KI+FPL + + RK + + +R N
Sbjct: 131 KVQTVKAEDTKRAGIKMFHDAKIRFPLPHRVTK---RKNLSVFTTARQN 176
>GENEDB_PFALCIPARUM|PF13_0224 [details] [associations]
symbol:PF13_0224 "60S ribosomal subunit protein
L18, putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735 EMBL:AL844509
GO:GO:0022625 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 ProtClustDB:CLSZ2447207 RefSeq:XP_001350134.1
ProteinModelPortal:Q8IDS6 PRIDE:Q8IDS6
EnsemblProtists:PF13_0224:mRNA GeneID:814191 KEGG:pfa:PF13_0224
EuPathDB:PlasmoDB:PF3D7_1341200 Uniprot:Q8IDS6
Length = 184
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 83/173 (47%), Positives = 122/173 (70%)
Query: 31 HQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 90
HQY +VGRA+PT KD++P +YRM ++A N+ AKS+FWYF++K+ K+KKSNG++LA +I
Sbjct: 14 HQYHIVGRAIPTAKDKNPNVYRMCIFAKNDTNAKSRFWYFMKKINKLKKSNGELLACEQI 73
Query: 91 FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQII 150
E+ P ++KNYG+ LRY SRTG HNMYKE+RDTT GA+ Q+Y+EMA RHR R+ I II
Sbjct: 74 KERFPLRVKNYGVLLRYDSRTGTHNMYKEFRDTTKEGAIAQLYSEMAGRHRARASSINII 133
Query: 151 RTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPT--RKLKTTYKASRPNLF 201
R + I + L +R KQ +++FP + PT ++ + + + RP+ +
Sbjct: 134 RISEISSSLVRRPHIKQLLKRRLRFPALHL----PTLQKEYRKKFASKRPSTY 182
>UNIPROTKB|Q8IDS6 [details] [associations]
symbol:PF13_0224 "60S ribosomal protein L18a" species:36329
"Plasmodium falciparum 3D7" [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISS] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0003735
EMBL:AL844509 GO:GO:0022625 HOGENOM:HOG000211377 KO:K02882
OMA:KSRYWYF PANTHER:PTHR10052 ProtClustDB:CLSZ2447207
RefSeq:XP_001350134.1 ProteinModelPortal:Q8IDS6 PRIDE:Q8IDS6
EnsemblProtists:PF13_0224:mRNA GeneID:814191 KEGG:pfa:PF13_0224
EuPathDB:PlasmoDB:PF3D7_1341200 Uniprot:Q8IDS6
Length = 184
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 83/173 (47%), Positives = 122/173 (70%)
Query: 31 HQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 90
HQY +VGRA+PT KD++P +YRM ++A N+ AKS+FWYF++K+ K+KKSNG++LA +I
Sbjct: 14 HQYHIVGRAIPTAKDKNPNVYRMCIFAKNDTNAKSRFWYFMKKINKLKKSNGELLACEQI 73
Query: 91 FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQII 150
E+ P ++KNYG+ LRY SRTG HNMYKE+RDTT GA+ Q+Y+EMA RHR R+ I II
Sbjct: 74 KERFPLRVKNYGVLLRYDSRTGTHNMYKEFRDTTKEGAIAQLYSEMAGRHRARASSINII 133
Query: 151 RTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPT--RKLKTTYKASRPNLF 201
R + I + L +R KQ +++FP + PT ++ + + + RP+ +
Sbjct: 134 RISEISSSLVRRPHIKQLLKRRLRFPALHL----PTLQKEYRKKFASKRPSTY 182
>RGD|1565566 [details] [associations]
symbol:RGD1565566 "similar to 60S ribosomal protein L18a"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 RGD:1565566 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
IPI:IPI00392231 Ensembl:ENSRNOT00000068694 Uniprot:F1M0K6
Length = 176
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 85/176 (48%), Positives = 121/176 (68%)
Query: 26 VTFRFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQML 85
V+ +Y++VGR LPT K P +YRM+++A N V AKS FW+F+ +LKK+KKS+G+++
Sbjct: 3 VSGTLREYKMVGRCLPTPKCHSPPLYRMRIFAPNHVVAKSGFWHFVSQLKKMKKSSGEIV 62
Query: 86 AINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSP 145
++FEK+P ++KN+GIWLRY SR+G HNMY+EYR T G V Q Y +M +RH R+
Sbjct: 63 YCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRYLTTAGLVTQCYQDMGARHCARAH 122
Query: 146 CIQIIRTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
IQI++ I A C+R + KQFH+SKIKFPL + +R R+ K + RPN F
Sbjct: 123 SIQIMKVVEIAAGKCRRPAVKQFHDSKIKFPLPHRVLR---RQHKPRFTIKRPNTF 175
>SGD|S000004855 [details] [associations]
symbol:RPL20A "Ribosomal 60S subunit protein L20A"
species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA;TAS] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0006412 "translation"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 SGD:S000004855 EMBL:BK006946 GO:GO:0003735
GO:GO:0002181 PDB:4B6A PDBsum:4B6A EMBL:Z48756 GO:GO:0022625
KO:K02882 PANTHER:PTHR10052 PDB:3U5E PDB:3U5I PDBsum:3U5E
PDBsum:3U5I EMBL:EF138821 PIR:S56056 RefSeq:NP_013969.3
RefSeq:NP_014957.2 ProteinModelPortal:P0CX23 SMR:P0CX23
EnsemblFungi:YMR242C EnsemblFungi:YOR312C GeneID:854489
GeneID:855283 KEGG:sce:YMR242C KEGG:sce:YOR312C CYGD:YMR242c
NextBio:976816 ArrayExpress:P0CX23 Uniprot:P0CX23
Length = 172
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/173 (49%), Positives = 122/173 (70%)
Query: 30 FHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINE 89
F +YQV+GR LPTE PK++RM+++A+NEV AKS++WYFL+KL KVKK++G++++IN+
Sbjct: 4 FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQ 63
Query: 90 IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQI 149
I E +PTK+KN+G+W+RY SR+G HNMYKE RD + AVE +Y +MA+RHR R I I
Sbjct: 64 INEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHI 123
Query: 150 IRTATIPAKL-CKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
++ A I KR+ KQF +KFPL + V+ T+ T+ RP+ F
Sbjct: 124 LKVAEIEKTADVKRQYVKQFLTKDLKFPLPHR-VQKSTK----TFSYKRPSTF 171
>SGD|S000005839 [details] [associations]
symbol:RPL20B "Ribosomal 60S subunit protein L20B"
species:4932 "Saccharomyces cerevisiae" [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0003735 "structural constituent of
ribosome" evidence=IEA;TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] [GO:0006412 "translation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 SGD:S000005839 EMBL:BK006948 GO:GO:0003735
GO:GO:0002181 EMBL:X90565 GO:GO:0022625 KO:K02882 PANTHER:PTHR10052
GeneTree:ENSGT00390000015797 PIR:S56056 RefSeq:NP_013969.3
RefSeq:NP_014957.2 EnsemblFungi:YMR242C EnsemblFungi:YOR312C
GeneID:854489 GeneID:855283 KEGG:sce:YMR242C KEGG:sce:YOR312C
NextBio:976816 EMBL:Z75220 EMBL:EF138822 ProteinModelPortal:P0CX24
SMR:P0CX24 CYGD:YOR312c ArrayExpress:P0CX24 GermOnline:YOR312C
Uniprot:P0CX24
Length = 172
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 85/173 (49%), Positives = 122/173 (70%)
Query: 30 FHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINE 89
F +YQV+GR LPTE PK++RM+++A+NEV AKS++WYFL+KL KVKK++G++++IN+
Sbjct: 4 FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQ 63
Query: 90 IFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQI 149
I E +PTK+KN+G+W+RY SR+G HNMYKE RD + AVE +Y +MA+RHR R I I
Sbjct: 64 INEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHI 123
Query: 150 IRTATIPAKL-CKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
++ A I KR+ KQF +KFPL + V+ T+ T+ RP+ F
Sbjct: 124 LKVAEIEKTADVKRQYVKQFLTKDLKFPLPHR-VQKSTK----TFSYKRPSTF 171
>UNIPROTKB|G4N6U9 [details] [associations]
symbol:MGG_03653 "60S ribosomal protein L20" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0043581 EMBL:CM001234 KO:K02882 PANTHER:PTHR10052
RefSeq:XP_003716235.1 ProteinModelPortal:G4N6U9
EnsemblFungi:MGG_03653T0 GeneID:2676638 KEGG:mgr:MGG_03653
Uniprot:G4N6U9
Length = 174
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 86/174 (49%), Positives = 115/174 (66%)
Query: 29 RFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAIN 88
R +YQV+GR LPTE + P +YRM+++A NEV AKS++WYFLR LKKVKK+ G+++A+N
Sbjct: 3 RLQEYQVIGRHLPTESNPTPSLYRMRIFAPNEVVAKSRYWYFLRGLKKVKKATGEIVAVN 62
Query: 89 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 148
+I EK+P K+KN+GIW+RY SR+G HNMYKEYR+ + AVE MY +MA+RHR R I
Sbjct: 63 KIHEKHPLKVKNFGIWIRYNSRSGTHNMYKEYRELSRTAAVEAMYQDMAARHRARFASIH 122
Query: 149 IIRTATIP-AKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I+R + KR KQ + FPL R P K + A RP+ F
Sbjct: 123 ILRVVELEKTDDIKRPYIKQLTTKGLTFPLPH---RVPKINNKKIFSARRPSTF 173
>CGD|CAL0003667 [details] [associations]
symbol:RPL20B species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=IDA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 CGD:CAL0003667
GO:GO:0009986 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:AACQ01000006 eggNOG:COG2157 KO:K02882 PANTHER:PTHR10052
RefSeq:XP_722704.1 ProteinModelPortal:Q5AML4 STRING:Q5AML4
GeneID:3635615 KEGG:cal:CaO19.4632 Uniprot:Q5AML4
Length = 172
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 84/174 (48%), Positives = 119/174 (68%)
Query: 29 RFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAIN 88
R ++YQV+GR LPTE PK++RM+++A N V AKS++WYFL+KL KVKK++G+++++N
Sbjct: 3 RLNEYQVIGRNLPTESVPEPKLFRMRIFAPNTVVAKSRYWYFLQKLHKVKKASGEIVSVN 62
Query: 89 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 148
I E PTK+K +GIWLRY+SR+G HNMYKEYRD T GAVE MY ++A+RHR R I
Sbjct: 63 IISEAKPTKVKTFGIWLRYESRSGIHNMYKEYRDVTRVGAVETMYQDLAARHRARFRSIH 122
Query: 149 IIRTATIP-AKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I++ + KR+ KQF +KFPL + +K K ++A+ P F
Sbjct: 123 ILKVVELEKTDDVKRQYVKQFLTKDLKFPLPHR-----VQKSKKLFQATAPTTF 171
>UNIPROTKB|Q5AML4 [details] [associations]
symbol:RPL20B "60S ribosomal protein L20" species:237561
"Candida albicans SC5314" [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 CGD:CAL0003667 GO:GO:0009986 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 EMBL:AACQ01000006 eggNOG:COG2157
KO:K02882 PANTHER:PTHR10052 RefSeq:XP_722704.1
ProteinModelPortal:Q5AML4 STRING:Q5AML4 GeneID:3635615
KEGG:cal:CaO19.4632 Uniprot:Q5AML4
Length = 172
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 84/174 (48%), Positives = 119/174 (68%)
Query: 29 RFHQYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAIN 88
R ++YQV+GR LPTE PK++RM+++A N V AKS++WYFL+KL KVKK++G+++++N
Sbjct: 3 RLNEYQVIGRNLPTESVPEPKLFRMRIFAPNTVVAKSRYWYFLQKLHKVKKASGEIVSVN 62
Query: 89 EIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQ 148
I E PTK+K +GIWLRY+SR+G HNMYKEYRD T GAVE MY ++A+RHR R I
Sbjct: 63 IISEAKPTKVKTFGIWLRYESRSGIHNMYKEYRDVTRVGAVETMYQDLAARHRARFRSIH 122
Query: 149 IIRTATIP-AKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I++ + KR+ KQF +KFPL + +K K ++A+ P F
Sbjct: 123 ILKVVELEKTDDVKRQYVKQFLTKDLKFPLPHR-----VQKSKKLFQATAPTTF 171
>POMBASE|SPAC26A3.04 [details] [associations]
symbol:rpl2002 "60S ribosomal protein L20 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006412 "translation"
evidence=ISO] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISO] InterPro:IPR021138 InterPro:IPR023573 Pfam:PF01775
PIRSF:PIRSF002190 PomBase:SPAC26A3.04 PomBase:SPAC3A12.10
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003735
GO:GO:0002181 GO:GO:0022625 eggNOG:COG2157 HOGENOM:HOG000211377
KO:K02882 OMA:KSRYWYF PANTHER:PTHR10052 EMBL:AF127913 EMBL:AB009012
PIR:S10051 PIR:T38392 PIR:T43301 RefSeq:NP_593336.1
RefSeq:NP_594147.1 ProteinModelPortal:P05732 IntAct:P05732
MINT:MINT-4686805 STRING:P05732 PRIDE:P05732
EnsemblFungi:SPAC26A3.04.1 EnsemblFungi:SPAC3A12.10.1
GeneID:2542093 GeneID:2542725 KEGG:spo:SPAC26A3.04
KEGG:spo:SPAC3A12.10 OrthoDB:EOG46MFTW NextBio:20803166
Uniprot:P05732
Length = 176
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 83/171 (48%), Positives = 114/171 (66%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+YQVVGR +PTE + PK++RM+L+A NE AKS++WYFL+ + KVKK+ G+++AINEI
Sbjct: 5 EYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEIS 64
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
E P K K +GIW+RY SR+G HNMYKE+RDTT GAVE MY +MA+RHR R I+I++
Sbjct: 65 EPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILK 124
Query: 152 TATIPAKL-CKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
+ K +R KQ N +KFPL ++ K + RP+ F
Sbjct: 125 VVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTF 175
>POMBASE|SPAC3A12.10 [details] [associations]
symbol:rpl2001 "60S ribosomal protein L20a (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190
PomBase:SPAC26A3.04 PomBase:SPAC3A12.10 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181 GO:GO:0022625
eggNOG:COG2157 HOGENOM:HOG000211377 KO:K02882 OMA:KSRYWYF
PANTHER:PTHR10052 EMBL:AF127913 EMBL:AB009012 PIR:S10051 PIR:T38392
PIR:T43301 RefSeq:NP_593336.1 RefSeq:NP_594147.1
ProteinModelPortal:P05732 IntAct:P05732 MINT:MINT-4686805
STRING:P05732 PRIDE:P05732 EnsemblFungi:SPAC26A3.04.1
EnsemblFungi:SPAC3A12.10.1 GeneID:2542093 GeneID:2542725
KEGG:spo:SPAC26A3.04 KEGG:spo:SPAC3A12.10 OrthoDB:EOG46MFTW
NextBio:20803166 Uniprot:P05732
Length = 176
Score = 426 (155.0 bits), Expect = 5.3e-40, P = 5.3e-40
Identities = 83/171 (48%), Positives = 114/171 (66%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+YQVVGR +PTE + PK++RM+L+A NE AKS++WYFL+ + KVKK+ G+++AINEI
Sbjct: 5 EYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINEIS 64
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
E P K K +GIW+RY SR+G HNMYKE+RDTT GAVE MY +MA+RHR R I+I++
Sbjct: 65 EPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRILK 124
Query: 152 TATIPAKL-CKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
+ K +R KQ N +KFPL ++ K + RP+ F
Sbjct: 125 VVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTF 175
>UNIPROTKB|B4DM74 [details] [associations]
symbol:RPL18A "60S ribosomal protein L18a" species:9606
"Homo sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 EMBL:AC007201 PANTHER:PTHR10052 HOVERGEN:HBG066281
EMBL:AC005796 UniGene:Hs.337766 HGNC:HGNC:10311 EMBL:AK297323
IPI:IPI00847774 SMR:B4DM74 STRING:B4DM74 Ensembl:ENST00000420197
Uniprot:B4DM74
Length = 154
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 72/137 (52%), Positives = 102/137 (74%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMK 128
Query: 152 TATIPAKLCKRESTKQF 168
I A C+R+ +F
Sbjct: 129 VEEIAASKCRRQHKPRF 145
>UNIPROTKB|F1MHJ6 [details] [associations]
symbol:F1MHJ6 "60S ribosomal protein L18a" species:9913
"Bos taurus" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 PANTHER:PTHR10052 GeneTree:ENSGT00390000015797
EMBL:DAAA02029600 IPI:IPI00714344 PRIDE:F1MHJ6
Ensembl:ENSBTAT00000012903 OMA:IASKFHD NextBio:20866654
Uniprot:F1MHJ6
Length = 168
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 81/170 (47%), Positives = 114/170 (67%)
Query: 32 QYQVVGRALPTEKDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIF 91
+Y+VVGR LPT K +Y M+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++F
Sbjct: 9 EYKVVGRCLPTPKCRTLPLYCMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVF 68
Query: 92 EKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIR 151
EK+P ++KN+GIWL Y SR+G HNM +EYRD T GAV Q Y +M +RHR R+ IQI++
Sbjct: 69 EKSPLRVKNFGIWLHYDSRSGTHNMDREYRDLTTAGAVTQCYRDMGARHRARAHLIQIMK 128
Query: 152 TATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
I A +FH+SKIKFPL + +R R+ K + RPN F
Sbjct: 129 VEEIIAS--------KFHDSKIKFPLPHRVLR---RQHKPRFTTKRPNTF 167
>ASPGD|ASPL0000056380 [details] [associations]
symbol:AN0433 species:162425 "Emericella nidulans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR021138 InterPro:IPR023573
Pfam:PF01775 PIRSF:PIRSF002190 EMBL:BN001308 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 OMA:KSRYWYF PANTHER:PTHR10052
EnsemblFungi:CADANIAT00002262 Uniprot:C8VTE9
Length = 148
Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 71/150 (47%), Positives = 98/150 (65%)
Query: 53 MKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTG 112
M+++A N V AKS+FWYFL +L+KVKK+NG+++++N I EK P K+KN+GIWLRY SR+G
Sbjct: 1 MRIFAPNAVVAKSRFWYFLTQLRKVKKANGEIVSLNVIHEKRPLKVKNFGIWLRYDSRSG 60
Query: 113 YHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIRTATIP-AKLCKRESTKQFHNS 171
HNMYKE+R+ + AVE +Y +MA+RHR R I I++ I A +R KQ
Sbjct: 61 THNMYKEFREMSRTEAVEALYQDMAARHRARFGSIHILKVVEIEKADSIRRPYIKQLLQK 120
Query: 172 KIKFPLVFKKVRPPTRKLKTTYKASRPNLF 201
+KFPL R T K + SRP+ F
Sbjct: 121 NLKFPLPH---RSATGNKKKVFAYSRPSTF 147
>UNIPROTKB|F1M6F8 [details] [associations]
symbol:F1M6F8 "60S ribosomal protein L18a" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR021138
InterPro:IPR023573 Pfam:PF01775 PIRSF:PIRSF002190 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 PANTHER:PTHR10052 IPI:IPI00950365
Ensembl:ENSRNOT00000001255 Uniprot:F1M6F8
Length = 165
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 65/169 (38%), Positives = 93/169 (55%)
Query: 32 QYQVVGRALPTEKDEHPK-IYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI 90
+Y VVGR LP HPK +N KS+FWY + +LK ++G+++ ++
Sbjct: 9 EYNVVGRCLP-----HPKNATHCHCTKSNHAVVKSRFWYSVSQLK----TSGEIVYHGQV 59
Query: 91 FEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQII 150
FEK+P ++KN+GIWL Y SR+G HNM +EY D G V Q Y +M + H + IQ +
Sbjct: 60 FEKSPLRVKNFGIWLCYDSRSGTHNMDREYWDLIATGVVTQCYRDMGAGHGA-THSIQNV 118
Query: 151 RTATIPAKLCKRESTKQFHNSKIKFPLVFKKVRPPTRKLKTTYKASRPN 199
+ I A R KQFH+S+IKFPL +R + K + A PN
Sbjct: 119 KVEEI-ADGKHRRPVKQFHDSRIKFPLPHHMLR----QQKPCFTAKSPN 162
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.133 0.406 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 202 202 0.00090 111 3 11 22 0.43 32
31 0.46 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 31
No. of states in DFA: 587 (62 KB)
Total size of DFA: 175 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.77u 0.14s 18.91t Elapsed: 00:00:01
Total cpu time: 18.77u 0.14s 18.91t Elapsed: 00:00:01
Start: Thu May 9 21:29:49 2013 End: Thu May 9 21:29:50 2013