Query 028915
Match_columns 202
No_of_seqs 225 out of 1329
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 06:54:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028915.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028915hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2y78_A Peptidyl-prolyl CIS-tra 99.9 8.4E-23 2.9E-27 159.0 12.6 99 71-201 21-121 (133)
2 1yat_A FK506 binding protein; 99.9 8.5E-23 2.9E-27 153.8 11.3 95 75-201 3-100 (113)
3 3kz7_A FK506-binding protein 3 99.9 1.4E-22 4.8E-27 153.7 12.1 101 76-201 2-106 (119)
4 2lgo_A FKBP; infectious diseas 99.9 9E-23 3.1E-27 158.2 10.7 103 67-201 11-118 (130)
5 1jvw_A Macrophage infectivity 99.9 8.1E-23 2.8E-27 165.1 10.5 98 70-201 29-129 (167)
6 1u79_A FKBP-type peptidyl-prol 99.9 6E-23 2E-27 158.5 9.0 100 70-201 4-116 (129)
7 4dip_A Peptidyl-prolyl CIS-tra 99.9 1.5E-22 5.2E-27 155.0 11.1 100 72-201 6-109 (125)
8 2ppn_A FK506-binding protein 1 99.9 3.2E-22 1.1E-26 148.9 11.2 91 79-201 1-94 (107)
9 3o5q_A Peptidyl-prolyl CIS-tra 99.9 3.5E-22 1.2E-26 154.0 11.3 95 75-201 16-113 (128)
10 2lkn_A AH receptor-interacting 99.9 4.2E-23 1.5E-27 166.7 6.2 86 74-191 6-96 (165)
11 3uf8_A Ubiquitin-like protein 99.9 5.1E-22 1.8E-26 165.5 12.4 98 72-201 98-197 (209)
12 3o5e_A Peptidyl-prolyl CIS-tra 99.9 5.1E-22 1.7E-26 156.3 11.6 95 75-201 32-129 (144)
13 1fd9_A Protein (macrophage inf 99.9 5.1E-22 1.7E-26 166.2 12.0 98 70-201 98-197 (213)
14 1r9h_A FKB-6, FK506 binding pr 99.9 7E-22 2.4E-26 153.8 11.2 95 76-202 12-109 (135)
15 1q6h_A FKBP-type peptidyl-prol 99.9 8.9E-22 3E-26 165.9 12.2 98 70-201 113-211 (224)
16 3b7x_A FK506-binding protein 6 99.9 2.1E-22 7E-27 156.7 7.3 97 73-201 21-120 (134)
17 3oe2_A Peptidyl-prolyl CIS-tra 99.9 7.6E-22 2.6E-26 165.8 10.9 96 69-201 108-205 (219)
18 2vn1_A 70 kDa peptidylprolyl i 99.9 1.4E-21 4.6E-26 150.6 11.0 99 71-201 8-113 (129)
19 2f4e_A ATFKBP42; FKBP-like, al 99.9 2.2E-21 7.4E-26 158.2 11.7 101 70-201 41-146 (180)
20 2jwx_A FKBP38NTD, FK506-bindin 99.8 9.3E-21 3.2E-25 151.7 10.8 94 72-201 36-135 (157)
21 2awg_A 38 kDa FK-506 binding p 99.8 1.6E-20 5.3E-25 142.6 10.4 93 73-201 7-104 (118)
22 2d9f_A FK506-binding protein 8 99.8 3E-20 1E-24 144.6 8.7 96 70-201 8-109 (135)
23 1q1c_A FK506-binding protein 4 99.8 2E-19 6.8E-24 155.7 12.0 95 76-202 49-146 (280)
24 2pbc_A FK506-binding protein 2 99.8 3.2E-19 1.1E-23 131.7 8.4 80 90-201 3-84 (102)
25 2if4_A ATFKBP42; FKBP-like, al 99.8 3.8E-19 1.3E-23 154.8 9.8 100 71-201 42-146 (338)
26 1kt0_A FKBP51, 51 kDa FK506-bi 99.8 2.8E-19 9.6E-24 161.7 7.8 96 75-202 28-126 (457)
27 3jxv_A 70 kDa peptidyl-prolyl 99.7 7.9E-20 2.7E-24 162.4 0.0 98 72-201 5-105 (356)
28 3jxv_A 70 kDa peptidyl-prolyl 99.7 1.5E-17 5.2E-22 147.7 10.6 96 76-202 242-342 (356)
29 3pr9_A FKBP-type peptidyl-prol 99.7 4.4E-17 1.5E-21 130.3 6.5 80 93-196 2-86 (157)
30 4dt4_A FKBP-type 16 kDa peptid 99.6 2.3E-16 8E-21 127.6 7.5 73 92-196 24-97 (169)
31 1q1c_A FK506-binding protein 4 99.6 4.5E-16 1.5E-20 134.6 9.4 92 76-201 166-260 (280)
32 2kr7_A FKBP-type peptidyl-prol 99.6 7.2E-16 2.4E-20 122.3 8.9 73 91-196 5-79 (151)
33 1ix5_A FKBP; ppiase, isomerase 99.6 4.8E-16 1.6E-20 123.3 6.3 81 93-197 2-88 (151)
34 3prb_A FKBP-type peptidyl-prol 99.6 6.2E-16 2.1E-20 130.8 7.1 80 93-196 2-86 (231)
35 2kfw_A FKBP-type peptidyl-prol 99.6 2.5E-15 8.7E-20 124.1 10.2 73 92-197 2-75 (196)
36 2k8i_A SLYD, peptidyl-prolyl C 99.6 2.2E-15 7.6E-20 121.9 9.5 72 92-196 2-74 (171)
37 1hxv_A Trigger factor; FKBP fo 99.5 6.8E-15 2.3E-19 111.4 7.0 70 90-194 27-97 (113)
38 1p5q_A FKBP52, FK506-binding p 99.5 9.6E-14 3.3E-18 120.4 11.6 95 73-201 20-117 (336)
39 3cgm_A SLYD, peptidyl-prolyl C 99.4 9.5E-14 3.3E-18 111.0 6.6 67 93-196 3-69 (158)
40 1w26_A Trigger factor, TF; cha 99.1 7.7E-11 2.6E-15 107.3 8.0 72 89-194 154-225 (432)
41 1kt0_A FKBP51, 51 kDa FK506-bi 99.1 2.5E-10 8.7E-15 102.9 9.2 92 76-201 144-238 (457)
42 1t11_A Trigger factor, TF; hel 98.8 1.1E-09 3.6E-14 98.7 3.7 70 91-194 159-228 (392)
43 3gty_X Trigger factor, TF; cha 97.3 0.00025 8.4E-09 64.4 5.1 57 92-185 154-210 (433)
44 3tb5_A Methionine aminopeptida 41.8 23 0.00078 28.8 3.9 61 90-179 82-142 (264)
45 1qxy_A Methionyl aminopeptidas 31.7 53 0.0018 26.2 4.5 27 90-116 81-107 (252)
46 1xgs_A Methionine aminopeptida 31.5 64 0.0022 26.9 5.1 26 91-116 71-96 (295)
47 4fuk_A Methionine aminopeptida 31.3 43 0.0015 28.5 4.0 61 90-179 141-201 (337)
48 3mx6_A Methionine aminopeptida 30.5 45 0.0015 27.0 3.9 61 90-179 86-146 (262)
49 2f23_A Anti-cleavage anti-GREA 29.5 71 0.0024 24.2 4.6 22 165-186 123-144 (156)
50 3bmb_A Regulator of nucleoside 28.1 67 0.0023 23.7 4.2 24 164-187 91-114 (136)
51 2pn0_A Prokaryotic transcripti 27.6 70 0.0024 23.9 4.2 23 165-187 95-117 (141)
52 3pka_A Methionine aminopeptida 26.2 58 0.002 26.9 3.9 27 90-116 119-145 (285)
53 2b3h_A Methionine aminopeptida 26.0 57 0.0019 27.8 3.9 61 90-179 153-213 (329)
54 3tav_A Methionine aminopeptida 25.1 54 0.0019 27.0 3.5 27 90-116 113-139 (286)
55 1o0x_A Methionine aminopeptida 24.6 64 0.0022 26.1 3.8 27 90-116 94-121 (262)
56 1zfu_A Plectasin; defensin,ant 22.3 15 0.0005 22.3 -0.5 16 9-24 7-22 (40)
57 2gg2_A Methionine aminopeptida 21.6 60 0.002 26.2 3.0 26 91-116 85-110 (263)
58 2e3g_A Defensin, mutant DEF-DA 21.3 22 0.00074 21.5 0.2 16 7-22 6-21 (40)
59 2lt8_A Eurocin; A/B-fold, cyst 21.3 25 0.00084 20.8 0.4 14 7-20 28-41 (42)
No 1
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.89 E-value=8.4e-23 Score=159.00 Aligned_cols=99 Identities=36% Similarity=0.609 Sum_probs=91.0
Q ss_pred CCceeCCCCeEEEEEecCCCCccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCccccccccc
Q 028915 71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVD 149 (202)
Q Consensus 71 ~~~~~~~sGl~~~~l~~G~G~~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~ 149 (202)
..+.++++|++|+++++|+|..++.||.|.|||+++. +|++||++++. ++|+.|.+|.+
T Consensus 21 ~~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~---------~~p~~f~lG~g----------- 80 (133)
T 2y78_A 21 MTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDR---------NDPFAFVLGGG----------- 80 (133)
T ss_dssp TCCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTSCEEEETTTT---------TCCEEEETTSS-----------
T ss_pred CCcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEeccCcC---------CCCEEEEeCCC-----------
Confidence 3578899999999999999999999999999999986 99999999863 68999999985
Q ss_pred ccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 150 NQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 150 ~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++.. .||||
T Consensus 81 ------------~vi~G~eeaL~gmk~Ge~~~v~ip~~~aYG~~~~~~~Ipp~ 121 (133)
T 2y78_A 81 ------------MVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPN 121 (133)
T ss_dssp ------------SSCHHHHHHSTTCBTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred ------------ChhHHHHHHHcCCCCCCEEEEEECcHHhCCCCCCCCCCCCC
Confidence 48899999999999999999999999999999875 49997
No 2
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.89 E-value=8.5e-23 Score=153.76 Aligned_cols=95 Identities=20% Similarity=0.331 Sum_probs=86.9
Q ss_pred eCCCCeEEEEEecCCCCc-cCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccC
Q 028915 75 TTSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQN 152 (202)
Q Consensus 75 ~~~sGl~~~~l~~G~G~~-p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~ 152 (202)
++++|++|+++++|+|.. ++.||.|.+||+++. +|++||++++. ++|+.|.+|.+
T Consensus 3 ~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~---------~~p~~f~lG~~-------------- 59 (113)
T 1yat_A 3 VIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDR---------GSPFQCNIGVG-------------- 59 (113)
T ss_dssp ECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTT---------TCCEEEETTSS--------------
T ss_pred CCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCC---------CCcEEEEeCCC--------------
Confidence 578999999999999998 999999999999985 99999999863 68999999975
Q ss_pred cccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 153 GLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 153 g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++.+ .||||
T Consensus 60 ---------~~i~g~e~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~~ 100 (113)
T 1yat_A 60 ---------QVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPN 100 (113)
T ss_dssp ---------SSCHHHHHHGGGCCTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred ---------CccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCCC
Confidence 48999999999999999999999999999999864 49987
No 3
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.89 E-value=1.4e-22 Score=153.69 Aligned_cols=101 Identities=22% Similarity=0.278 Sum_probs=87.0
Q ss_pred CCCCeEEEEEecCCCC-ccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCc
Q 028915 76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNG 153 (202)
Q Consensus 76 ~~sGl~~~~l~~G~G~-~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g 153 (202)
.|+|++++++++|+|. .|+.||.|.|||++++ ||++||+|++.. +.++..++|+.|.+|.+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~--~~~~~~~~p~~f~lG~~--------------- 64 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTS--SKKKKNAKPLSFKVGVG--------------- 64 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCS--SSTTTTCCCEEEETTSS---------------
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccc--cccccCCCCEEEEECCC---------------
Confidence 5899999999999996 5999999999999985 999999997531 11111258999999985
Q ss_pred ccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC--CCCCC
Q 028915 154 LFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN--EIPVK 201 (202)
Q Consensus 154 ~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~--~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||++|.+ .||||
T Consensus 65 --------~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~ 106 (119)
T 3kz7_A 65 --------KVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPN 106 (119)
T ss_dssp --------SSCHHHHHHHTTCCTTCEEEEEECGGGTTCTTCBGGGTBCTT
T ss_pred --------ChhHHHHHHHhCCCCCCEEEEEECcHHhcCCCCCCCCccCcC
Confidence 48899999999999999999999999999999975 59997
No 4
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.88 E-value=9e-23 Score=158.15 Aligned_cols=103 Identities=24% Similarity=0.363 Sum_probs=92.7
Q ss_pred CCCCCCceeCCCCeEEE--EEecCCCCc-cCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcc
Q 028915 67 AIPLEDYHTTSDGLKYY--DIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKE 142 (202)
Q Consensus 67 ~~~~~~~~~~~sGl~~~--~l~~G~G~~-p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~ 142 (202)
.....++..+++|++|+ ++++|+|.. ++.||.|.|||+++. ||++||+++++ ++|+.|.+|.+
T Consensus 11 ~~~~~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~---------~~p~~f~lG~g---- 77 (130)
T 2lgo_A 11 TLEAQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSR---------GKPFQFTLGAG---- 77 (130)
T ss_dssp CSCCSSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTT---------TCCEEEETTST----
T ss_pred ccccccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcC---------CCCEEEEeCCC----
Confidence 34556788899999999 999999998 999999999999985 99999999863 58999999985
Q ss_pred cccccccccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 143 RKREFVDNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 143 ~~~~~~~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|.|||++|||+++.+ .||||
T Consensus 78 -------------------~vi~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~ 118 (130)
T 2lgo_A 78 -------------------EVIKGWDQGVATMTLGEKALFTIPYQLAYGERGYPPVIPPK 118 (130)
T ss_dssp -------------------TSCHHHHHHHHHSCTTEEEEEEECTTTSTTTTCCSTTSCSS
T ss_pred -------------------CccHHHHHHHhCCCCCCEEEEEECcHHHCCCCCCCCCcCCC
Confidence 48999999999999999999999999999999864 49987
No 5
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.88 E-value=8.1e-23 Score=165.14 Aligned_cols=98 Identities=21% Similarity=0.299 Sum_probs=89.6
Q ss_pred CCCceeCCCCeEEEEEecCCCCc-cCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCccccccc
Q 028915 70 LEDYHTTSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREF 147 (202)
Q Consensus 70 ~~~~~~~~sGl~~~~l~~G~G~~-p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~ 147 (202)
..++.++++|++|+++++|+|.. |+.||.|.|||++++ ||++||+++++ +.|+.|.+|.
T Consensus 29 ~~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~---------g~p~~f~lg~---------- 89 (167)
T 1jvw_A 29 QPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRER---------GKPTTFRPNE---------- 89 (167)
T ss_dssp STTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHH---------TSCEEECGGG----------
T ss_pred CCCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeecccc---------CCCEEEEeCc----------
Confidence 34688999999999999999998 999999999999985 99999999864 6899999853
Q ss_pred ccccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 148 VDNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 148 ~~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
+|+||+++|.+|++|++++|+|||++|||+++.+ .||||
T Consensus 90 ---------------vI~G~eeaL~gMk~Ge~~~~~Ip~~laYG~~g~~~~Ipp~ 129 (167)
T 1jvw_A 90 ---------------VIKGWTEALQLMREGDRWRLFIPYDLAYGVTGGGGMIPPY 129 (167)
T ss_dssp ---------------SCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCSSSSSCTT
T ss_pred ---------------hhHHHHHHHcCCCCCCEEEEEECchhhCCCCCCCCCcCCC
Confidence 7899999999999999999999999999999975 49997
No 6
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.88 E-value=6e-23 Score=158.52 Aligned_cols=100 Identities=30% Similarity=0.472 Sum_probs=90.7
Q ss_pred CCCceeCCCCeEEEEEecCCCCccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccc
Q 028915 70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFV 148 (202)
Q Consensus 70 ~~~~~~~~sGl~~~~l~~G~G~~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~ 148 (202)
..++.++++|++|+++++|+|..++.||.|.|||+++. +|++||+++++ ++|+.|.+|.+
T Consensus 4 ~~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~---------~~p~~f~lG~~---------- 64 (129)
T 1u79_A 4 SCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNR---------GKPLTFRIGVG---------- 64 (129)
T ss_dssp -CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHH---------TSCEEEETTSS----------
T ss_pred CCccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEEecCCC---------CCCEEEEeCCC----------
Confidence 45789999999999999999999999999999999985 99999999864 68999999975
Q ss_pred cccCcccccCCCCCCCchHHHHhcC------CCcCcEEEEEEcCCCCCCCCCC------CCCCCC
Q 028915 149 DNQNGLFSAQAAPKPPPAMYSVTEG------MKVGGKRTVIVPPEAGYDKKRM------NEIPVK 201 (202)
Q Consensus 149 ~~~~g~~~~~~~~~~i~Gle~aL~g------MkvG~k~~v~IPp~lgYG~~g~------~~IPpn 201 (202)
++|+||+++|.+ |++|++++|+|||++|||+++. ..||||
T Consensus 65 -------------~~i~G~~~~L~G~~~~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~ 116 (129)
T 1u79_A 65 -------------EVIKGWDQGILGSDGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPA 116 (129)
T ss_dssp -------------SSCHHHHHHHHCBTTBCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTT
T ss_pred -------------CccHHHHHHhcccccccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCC
Confidence 489999999998 9999999999999999999985 259987
No 7
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.88 E-value=1.5e-22 Score=155.05 Aligned_cols=100 Identities=23% Similarity=0.318 Sum_probs=89.5
Q ss_pred CceeCCCCeEEEEEecCC--CCccCCCCEEEEEEEEEe--CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCccccccc
Q 028915 72 DYHTTSDGLKYYDIVEGK--GPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREF 147 (202)
Q Consensus 72 ~~~~~~sGl~~~~l~~G~--G~~p~~Gd~V~v~Y~g~~--~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~ 147 (202)
...++++|++|+++++|+ |..++.||.|.|||++++ ||++||++++. ...+|+.|.+|.+
T Consensus 6 ~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~-------~~~~p~~f~lG~~--------- 69 (125)
T 4dip_A 6 GALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKH-------NNGQPIWFTLGIL--------- 69 (125)
T ss_dssp GGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHH-------TTTCCEEEETTSC---------
T ss_pred ceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccC-------CCCcCEEEEeCCC---------
Confidence 345678999999999998 789999999999999985 89999999742 0158999999985
Q ss_pred ccccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCCCCCC
Q 028915 148 VDNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMNEIPVK 201 (202)
Q Consensus 148 ~~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++.+.||||
T Consensus 70 --------------~~i~G~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~~~Ip~~ 109 (125)
T 4dip_A 70 --------------EALKGWDQGLKGMCVGEKRKLIIPPALGYGKEGKGKIPPE 109 (125)
T ss_dssp --------------SSCHHHHHHSTTCCTTCEEEEEECGGGTTTTTCBTTBCTT
T ss_pred --------------ChhHHHHHHHhCCCCCCEEEEEEChHHhcCCCCCCCCCCC
Confidence 4899999999999999999999999999999998889997
No 8
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.88 E-value=3.2e-22 Score=148.89 Aligned_cols=91 Identities=24% Similarity=0.435 Sum_probs=83.5
Q ss_pred CeEEEEEecCCCCc-cCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccc
Q 028915 79 GLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFS 156 (202)
Q Consensus 79 Gl~~~~l~~G~G~~-p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~ 156 (202)
|++|+++++|+|.. ++.||.|.+||+++. +|++|+++++. ++|+.|.+|.+
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~---------~~p~~f~lG~~------------------ 53 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDR---------NKPFKFMLGKQ------------------ 53 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHH---------TSCEEEETTSC------------------
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCC---------CCCEEEEeCCC------------------
Confidence 78999999999987 999999999999985 99999999864 67999999985
Q ss_pred cCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 157 AQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 157 ~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|+||+++|.+|++|+++++.|||++|||+++.+ .||||
T Consensus 54 -----~~i~g~~~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~ 94 (107)
T 2ppn_A 54 -----EVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPH 94 (107)
T ss_dssp -----CSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred -----ChHHHHHHHHhCCCCCCEEEEEECHHHccCCCCCCCCcCCC
Confidence 48999999999999999999999999999999864 59987
No 9
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.87 E-value=3.5e-22 Score=153.98 Aligned_cols=95 Identities=24% Similarity=0.303 Sum_probs=86.8
Q ss_pred eCCCCeEEEEEecCCCC-ccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccC
Q 028915 75 TTSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQN 152 (202)
Q Consensus 75 ~~~sGl~~~~l~~G~G~-~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~ 152 (202)
..++|++|+++++|+|. .|+.||.|.|||++++ ||++||++++. ++|+.|.+|.+
T Consensus 16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~---------~~p~~f~lG~g-------------- 72 (128)
T 3o5q_A 16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDR---------NEPFVFSLGKG-------------- 72 (128)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHH---------TSCEEEETTSS--------------
T ss_pred cCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCC---------CCCEEEEECCC--------------
Confidence 36789999999999997 6999999999999985 99999999864 78999999985
Q ss_pred cccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 153 GLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 153 g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++.+ .||||
T Consensus 73 ---------~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~ 113 (128)
T 3o5q_A 73 ---------QVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSN 113 (128)
T ss_dssp ---------SSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred ---------CccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCCCCcCCC
Confidence 48999999999999999999999999999999875 59997
No 10
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.87 E-value=4.2e-23 Score=166.66 Aligned_cols=86 Identities=21% Similarity=0.319 Sum_probs=78.3
Q ss_pred eeCCCCeEEEEEecCCCCc--cCCCCEEEEEEEEEe---CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccc
Q 028915 74 HTTSDGLKYYDIVEGKGPV--AQKGSTVQVHFDCIF---RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFV 148 (202)
Q Consensus 74 ~~~~sGl~~~~l~~G~G~~--p~~Gd~V~v~Y~g~~---~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~ 148 (202)
.++++||+|+++++|+|.. ++.||.|+|||+|++ +|++||||+++ ++|+.|.+|.+
T Consensus 6 ~~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~r---------g~P~~f~lG~g---------- 66 (165)
T 2lkn_A 6 RLREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRAR---------GKPMELIIGKK---------- 66 (165)
T ss_dssp HHHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTT---------TCCEEEESSSS----------
T ss_pred cccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccC---------CCCEEEEecCC----------
Confidence 3468999999999999975 468999999999973 49999999874 89999999986
Q ss_pred cccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCC
Q 028915 149 DNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYD 191 (202)
Q Consensus 149 ~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG 191 (202)
++|+||+++|.+|++|++++|+|||+||||
T Consensus 67 -------------~vI~Gwd~gl~~M~~Ge~~~~~ipp~laYG 96 (165)
T 2lkn_A 67 -------------FKLPVWETIVCTMREGEIAQFLCDIKHVVL 96 (165)
T ss_dssp -------------CSCSHHHHHHTTCCTTCEEEEECCHHHHSS
T ss_pred -------------CccHHHHHHHhcCccCceEEEEECHHHhcC
Confidence 589999999999999999999999999999
No 11
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.87 E-value=5.1e-22 Score=165.51 Aligned_cols=98 Identities=37% Similarity=0.623 Sum_probs=91.1
Q ss_pred CceeCCCCeEEEEEecCCCCccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccc
Q 028915 72 DYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDN 150 (202)
Q Consensus 72 ~~~~~~sGl~~~~l~~G~G~~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~ 150 (202)
.+.++++|++|+++++|+|..|+.||.|.|||++++ ||++||++++. ++|+.|.+|.+
T Consensus 98 t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG~~fdss~~~---------~~P~~f~lG~g------------ 156 (209)
T 3uf8_A 98 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDR---------NDPFAFVLGGG------------ 156 (209)
T ss_dssp CCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTSCEEEESGGG---------TCCEEEETTSS------------
T ss_pred cccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECCCCEEEEcccc---------CCCEEEEeCCC------------
Confidence 477899999999999999999999999999999985 99999999874 78999999986
Q ss_pred cCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCC-CCCC
Q 028915 151 QNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMNE-IPVK 201 (202)
Q Consensus 151 ~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~~-IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||++|.+. ||||
T Consensus 157 -----------~vi~G~eeaL~gM~~Ge~~~v~Ipp~~aYG~~g~~~~IP~~ 197 (209)
T 3uf8_A 157 -----------MVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPPN 197 (209)
T ss_dssp -----------SSCHHHHHHHTTCBTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred -----------ccchhHHHHHhCCCCCCEEEEEECcHHhCCCCCCCCCcCCC
Confidence 478999999999999999999999999999999865 9997
No 12
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.87 E-value=5.1e-22 Score=156.28 Aligned_cols=95 Identities=24% Similarity=0.303 Sum_probs=87.0
Q ss_pred eCCCCeEEEEEecCCCC-ccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccC
Q 028915 75 TTSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQN 152 (202)
Q Consensus 75 ~~~sGl~~~~l~~G~G~-~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~ 152 (202)
..++|+.|+++++|+|. .|+.||.|.|||++++ ||++||+++++ ++|+.|.+|.+
T Consensus 32 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~---------~~p~~f~lG~g-------------- 88 (144)
T 3o5e_A 32 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDR---------NEPFVFSLGKG-------------- 88 (144)
T ss_dssp SCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGG---------TSCEEEETTSS--------------
T ss_pred cCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeeccc---------CCCeEEEeCCC--------------
Confidence 35789999999999997 6999999999999985 99999999874 78999999986
Q ss_pred cccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 153 GLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 153 g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||++|.+ .||||
T Consensus 89 ---------~~i~G~e~~l~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ipp~ 129 (144)
T 3o5e_A 89 ---------QVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSN 129 (144)
T ss_dssp ---------SSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred ---------cccHHHHHHHhCCCCCCEEEEEEChHHCcCCCCCCCCcCCC
Confidence 48999999999999999999999999999999875 59997
No 13
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.87 E-value=5.1e-22 Score=166.21 Aligned_cols=98 Identities=22% Similarity=0.322 Sum_probs=89.9
Q ss_pred CCCceeCCCCeEEEEEecCCCCccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccc
Q 028915 70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFV 148 (202)
Q Consensus 70 ~~~~~~~~sGl~~~~l~~G~G~~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~ 148 (202)
...+.++++|++|+++++|+|..|+.||.|.|||++++ ||++||+++++ ++|+.|.+|.
T Consensus 98 ~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~---------g~p~~f~lg~----------- 157 (213)
T 1fd9_A 98 KPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKT---------GKPATFQVSQ----------- 157 (213)
T ss_dssp STTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHH---------CSCEEEEGGG-----------
T ss_pred cCCcEECCCccEEEEEecCCCccCCCCCEEEEEEEEEECCCCEEeecccc---------CCCEEEEcCc-----------
Confidence 45688999999999999999999999999999999985 99999999874 6899999953
Q ss_pred cccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 149 DNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 149 ~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
+|+||+++|.+|++|++++|+|||++|||+++.+ .||||
T Consensus 158 --------------vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~~~~Ipp~ 197 (213)
T 1fd9_A 158 --------------VIPGWTEALQLMPAGSTWEIYVPSGLAYGPRSVGGPIGPN 197 (213)
T ss_dssp --------------SCHHHHHHHTTCCTTCEEEEEECGGGTTTTCCCSSSCCTT
T ss_pred --------------hhhHHHHHHcCCCCCCEEEEEECchhccCccCCCCCCCCC
Confidence 7899999999999999999999999999999975 59997
No 14
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.87 E-value=7e-22 Score=153.85 Aligned_cols=95 Identities=22% Similarity=0.312 Sum_probs=86.7
Q ss_pred CCCCeEEEEEecCCCC-ccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCc
Q 028915 76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNG 153 (202)
Q Consensus 76 ~~sGl~~~~l~~G~G~-~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g 153 (202)
+++|++|+++++|+|. .|+.||.|.|||++++ +|++||+++++ ++|+.|.+|.+
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~---------~~p~~f~lG~~--------------- 67 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDR---------GDQFSFNLGRG--------------- 67 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHH---------TSCEEEETTTT---------------
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcC---------CCCEEEEeCCC---------------
Confidence 6789999999999997 6999999999999986 99999999864 68999999985
Q ss_pred ccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCCC
Q 028915 154 LFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVKP 202 (202)
Q Consensus 154 ~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn~ 202 (202)
++|+||+++|.+|++|++++|+|||++|||+.+.+ .||||.
T Consensus 68 --------~vi~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~ 109 (135)
T 1r9h_A 68 --------NVIKGWDLGVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGA 109 (135)
T ss_dssp --------SSCHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBTTTBCTTC
T ss_pred --------CccHHHHHHHhcCCCCCEEEEEEChHHcCCCCCCCCCcCcCC
Confidence 58999999999999999999999999999998874 599873
No 15
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.87 E-value=8.9e-22 Score=165.88 Aligned_cols=98 Identities=30% Similarity=0.484 Sum_probs=90.1
Q ss_pred CCCceeCCCCeEEEEEecCCCCccCCCCEEEEEEEEE-eCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccc
Q 028915 70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCI-FRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFV 148 (202)
Q Consensus 70 ~~~~~~~~sGl~~~~l~~G~G~~p~~Gd~V~v~Y~g~-~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~ 148 (202)
.+++.++++|++|+++++|+|..|+.||.|.|||+++ .||++||+++++ ++|+.|.+|.
T Consensus 113 ~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~---------g~p~~f~lg~----------- 172 (224)
T 1q6h_A 113 EKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTR---------GEPLSFRLDG----------- 172 (224)
T ss_dssp STTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGG---------TSCEEEEGGG-----------
T ss_pred CCCeEECCCceEEEEEecccCccccCCCEEEEEEEEEeCCCCEEeecccc---------CCCEEEEcCC-----------
Confidence 3567789999999999999999999999999999998 599999999874 6899999953
Q ss_pred cccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCCCCCC
Q 028915 149 DNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMNEIPVK 201 (202)
Q Consensus 149 ~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~~IPpn 201 (202)
+|+||+++|.+|++|++++|+|||+++||+++.+.||||
T Consensus 173 --------------vI~G~eeaL~gMk~Gek~~v~IP~~laYG~~g~~~IPp~ 211 (224)
T 1q6h_A 173 --------------VIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPN 211 (224)
T ss_dssp --------------SCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCBTTBCTT
T ss_pred --------------cchhHHHHHcCCCCCCEEEEEECchhhcCcCCCCCCCCC
Confidence 789999999999999999999999999999998779997
No 16
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.86 E-value=2.1e-22 Score=156.67 Aligned_cols=97 Identities=19% Similarity=0.148 Sum_probs=81.9
Q ss_pred ceeCCCCeEEEEEecCCCCccCCCCEEEEEEEEEe--CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccc
Q 028915 73 YHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDN 150 (202)
Q Consensus 73 ~~~~~sGl~~~~l~~G~G~~p~~Gd~V~v~Y~g~~--~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~ 150 (202)
.+++++|++|+++++|+|..+..||.|.|||++++ +|++||+++++ ++|+.|.+|.+
T Consensus 21 ~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~---------~~p~~f~lG~g------------ 79 (134)
T 3b7x_A 21 DISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFR---------KTPRLMKLGED------------ 79 (134)
T ss_dssp ESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC----------------CEEC-CC------------
T ss_pred eeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCC---------CCCEEEEcCCc------------
Confidence 45578999999999999999999999999999985 69999999863 67999999986
Q ss_pred cCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCC-CCCC
Q 028915 151 QNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMNE-IPVK 201 (202)
Q Consensus 151 ~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~~-IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++.+. ||||
T Consensus 80 -----------~~i~G~e~aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~ 120 (134)
T 3b7x_A 80 -----------ITLWGMELGLLSMRRGELARFLFKPNYAYGTLGCPPLIPPN 120 (134)
T ss_dssp -----------CCCHHHHHHHHTCEETCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred -----------chhHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcC
Confidence 488999999999999999999999999999998754 9987
No 17
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.86 E-value=7.6e-22 Score=165.81 Aligned_cols=96 Identities=19% Similarity=0.309 Sum_probs=88.3
Q ss_pred CCCCceeCCCCeEEEEEecCCCCccCCCCEEEEEEEEE-eCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCccccccc
Q 028915 69 PLEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCI-FRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREF 147 (202)
Q Consensus 69 ~~~~~~~~~sGl~~~~l~~G~G~~p~~Gd~V~v~Y~g~-~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~ 147 (202)
....+.++++|++|+++++|+|..|..||.|.|||+++ .||++||+| ++|+.|.+|.
T Consensus 108 ~~~gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG~vfDss------------~~P~~f~lG~---------- 165 (219)
T 3oe2_A 108 AKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQS------------TQPQWFRLDS---------- 165 (219)
T ss_dssp TSTTCEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTSCEEEEC------------SSCEEEEGGG----------
T ss_pred cCCCcEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECCCCEeecc------------CCcEEEEecc----------
Confidence 44568889999999999999999999999999999997 599999987 3599999974
Q ss_pred ccccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCCC-CCCC
Q 028915 148 VDNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMNE-IPVK 201 (202)
Q Consensus 148 ~~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~~-IPpn 201 (202)
+|+||+++|.+|++|++++|+|||++|||++|.+. ||||
T Consensus 166 ---------------vI~G~eeaL~gMk~Gek~~v~IPp~lAYG~~g~~~~IPpn 205 (219)
T 3oe2_A 166 ---------------VISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGDLIDPF 205 (219)
T ss_dssp ---------------SCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred ---------------hhHHHHHHHhCCCCCCEEEEEECchhcCCCCCCCCCCCCC
Confidence 68999999999999999999999999999999875 9998
No 18
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.86 E-value=1.4e-21 Score=150.62 Aligned_cols=99 Identities=22% Similarity=0.277 Sum_probs=86.3
Q ss_pred CCceeCCCCeEEE-EEecC---CCCccCCCCEEEEEEEEEe--CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccc
Q 028915 71 EDYHTTSDGLKYY-DIVEG---KGPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERK 144 (202)
Q Consensus 71 ~~~~~~~sGl~~~-~l~~G---~G~~p~~Gd~V~v~Y~g~~--~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~ 144 (202)
..+..+++|+.|+ ++++| +|..++.||.|.|||++++ +|++||++++. ++|+.|.+|.+
T Consensus 8 ~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~---------~~p~~f~lG~g------ 72 (129)
T 2vn1_A 8 EKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDR---------NVPFKFHLEQG------ 72 (129)
T ss_dssp EEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGT---------TCCEEEETTSS------
T ss_pred CCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCC---------CccEEEEeCCC------
Confidence 3566788888875 78865 5688999999999999986 99999999863 68999999985
Q ss_pred cccccccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 145 REFVDNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 145 ~~~~~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++.+ .||||
T Consensus 73 -----------------~~i~g~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~ 113 (129)
T 2vn1_A 73 -----------------EVIKGWDICVSSMRKNEKCLVRIESMYGYGDEGCGESIPGN 113 (129)
T ss_dssp -----------------SSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred -----------------CcCHHHHHHHhCCCCCCEEEEEEChHHcCCCCCCCCCcCCC
Confidence 48899999999999999999999999999999864 49987
No 19
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.86 E-value=2.2e-21 Score=158.23 Aligned_cols=101 Identities=21% Similarity=0.204 Sum_probs=90.4
Q ss_pred CCCceeCCCCeEEEEEecCCCCccCCCCEEEEEEEEEe--CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCccccccc
Q 028915 70 LEDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREF 147 (202)
Q Consensus 70 ~~~~~~~~sGl~~~~l~~G~G~~p~~Gd~V~v~Y~g~~--~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~ 147 (202)
...+.++++|++|+++++|+|..|+.||.|.|||++++ +|++|+++++. ++|+.|.+|.+.
T Consensus 41 ~~~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~---------~~p~~f~lG~g~-------- 103 (180)
T 2f4e_A 41 DSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHE---------QQPIELVLGKEK-------- 103 (180)
T ss_dssp CSCCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTTT---------TCCEEEETTSCC--------
T ss_pred CCCcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCcc---------CCCEEEEeCCCC--------
Confidence 34678899999999999999999999999999999986 69999999864 689999999740
Q ss_pred ccccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCC---CCCCCC
Q 028915 148 VDNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRM---NEIPVK 201 (202)
Q Consensus 148 ~~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~---~~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||..+. +.||||
T Consensus 104 --------------~vi~G~eeaL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~ 146 (180)
T 2f4e_A 104 --------------KELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPM 146 (180)
T ss_dssp --------------GGGHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTT
T ss_pred --------------chhHHHHHHHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCC
Confidence 2689999999999999999999999999999985 569987
No 20
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.84 E-value=9.3e-21 Score=151.68 Aligned_cols=94 Identities=21% Similarity=0.222 Sum_probs=84.1
Q ss_pred CceeCCCCe-EEEEEecCCCC--ccCCCCEEEEEEEEE-eCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCccccccc
Q 028915 72 DYHTTSDGL-KYYDIVEGKGP--VAQKGSTVQVHFDCI-FRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREF 147 (202)
Q Consensus 72 ~~~~~~sGl-~~~~l~~G~G~--~p~~Gd~V~v~Y~g~-~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~ 147 (202)
...++++|+ +|+++++|+|. .|+.||.|.|||+++ .||++||++ +|+.|.+|.+
T Consensus 36 ~~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~-------------~p~~f~lG~g--------- 93 (157)
T 2jwx_A 36 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE-------------PELVFTLGDC--------- 93 (157)
T ss_dssp CEESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE-------------EEEEEETTTT---------
T ss_pred cceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC-------------CCEEEEeCCC---------
Confidence 344789997 89999999997 899999999999998 499999973 4899999975
Q ss_pred ccccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCC-CC-CCCCC
Q 028915 148 VDNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKR-MN-EIPVK 201 (202)
Q Consensus 148 ~~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g-~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++ .+ .||||
T Consensus 94 --------------~vi~G~eeaL~gMk~Ge~~~v~IP~~~aYG~~g~~~~~IPp~ 135 (157)
T 2jwx_A 94 --------------DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPH 135 (157)
T ss_dssp --------------SSCHHHHHHTTTSCTTCEEEEEECGGGTTTTTCCSSSCCCTT
T ss_pred --------------ChhHHHHHHHcCCCCCCEEEEEECchhcCCcccccCCCcCCC
Confidence 489999999999999999999999999999998 54 59997
No 21
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.83 E-value=1.6e-20 Score=142.59 Aligned_cols=93 Identities=22% Similarity=0.264 Sum_probs=83.0
Q ss_pred ceeCCCC-eEEEEEecCCCC--ccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccc
Q 028915 73 YHTTSDG-LKYYDIVEGKGP--VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFV 148 (202)
Q Consensus 73 ~~~~~sG-l~~~~l~~G~G~--~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~ 148 (202)
...+++| ++|+++++|+|. .|+.||.|.+||+++. +|++|+++ +|+.|.+|.+
T Consensus 7 ~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~-------------~p~~f~lG~~---------- 63 (118)
T 2awg_A 7 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE-------------PELVFTLGDC---------- 63 (118)
T ss_dssp EESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE-------------EEEEEETTSS----------
T ss_pred eEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC-------------CCEEEEECCC----------
Confidence 4557788 999999999997 7999999999999984 99999863 4899999975
Q ss_pred cccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 149 DNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 149 ~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++.+ .||||
T Consensus 64 -------------~~i~g~e~~l~gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~ 104 (118)
T 2awg_A 64 -------------DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGRSPYIPPH 104 (118)
T ss_dssp -------------CSCHHHHHHGGGSCTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred -------------ChhHHHHHHHhCCCCCCEEEEEEChHHccCCCCCCCccCCC
Confidence 48999999999999999999999999999999864 59987
No 22
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=3e-20 Score=144.59 Aligned_cols=96 Identities=22% Similarity=0.240 Sum_probs=84.6
Q ss_pred CCCceeCCCC-eEEEEEecCCCC--ccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCccccc
Q 028915 70 LEDYHTTSDG-LKYYDIVEGKGP--VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKR 145 (202)
Q Consensus 70 ~~~~~~~~sG-l~~~~l~~G~G~--~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~ 145 (202)
++....+++| ++|+++++|+|. .++.||.|.|||+++. +|++|++ .+|+.|.+|.+
T Consensus 8 ~~~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds-------------~~p~~f~lG~g------- 67 (135)
T 2d9f_A 8 EEWLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQE-------------EPELVFTLGDC------- 67 (135)
T ss_dssp SSCEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEE-------------EEEEEEETTSC-------
T ss_pred ccCcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEec-------------CCCEEEEeCCC-------
Confidence 3345667888 999999999997 8999999999999985 9999986 25899999975
Q ss_pred ccccccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCC-CC-CCCCC
Q 028915 146 EFVDNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKR-MN-EIPVK 201 (202)
Q Consensus 146 ~~~~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g-~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++ .+ .||||
T Consensus 68 ----------------~~i~G~e~~L~gm~~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~ 109 (135)
T 2d9f_A 68 ----------------DVIQALDLSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPH 109 (135)
T ss_dssp ----------------CSCTTTTTTGGGSCTTCEEEEEECHHHHTCTTCCSSSCCCTT
T ss_pred ----------------ChhHHHHHHHhCCCCCCEEEEEEChhHccCcCCcCCCccCCC
Confidence 489999999999999999999999999999998 54 59987
No 23
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.80 E-value=2e-19 Score=155.69 Aligned_cols=95 Identities=24% Similarity=0.311 Sum_probs=86.6
Q ss_pred CCCCeEEEEEecCCCCc-cCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCc
Q 028915 76 TSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNG 153 (202)
Q Consensus 76 ~~sGl~~~~l~~G~G~~-p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g 153 (202)
+++|++|+++++|+|.. |+.||.|+|||++++ +|++||+++++ ++|+.|.+|.+
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~---------~~p~~f~lG~g--------------- 104 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDR---------KDKFSFDLGKG--------------- 104 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTS---------SSCEEEETTTT---------------
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccC---------CCCEEEEECCc---------------
Confidence 57899999999999987 999999999999986 99999999863 68999999986
Q ss_pred ccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCCC
Q 028915 154 LFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVKP 202 (202)
Q Consensus 154 ~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn~ 202 (202)
++|+||+++|.+|++|++++|+|||++|||+.|.+ .||||.
T Consensus 105 --------~vi~G~e~aL~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ip~~~ 146 (280)
T 1q1c_A 105 --------EVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNA 146 (280)
T ss_dssp --------SSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTC
T ss_pred --------ChhHHHHHHHhcCCCCCEEEEEECcHHhCCCcCccCCCCCCC
Confidence 48899999999999999999999999999998864 488874
No 24
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.78 E-value=3.2e-19 Score=131.69 Aligned_cols=80 Identities=25% Similarity=0.403 Sum_probs=72.1
Q ss_pred CCccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHH
Q 028915 90 GPVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMY 168 (202)
Q Consensus 90 G~~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle 168 (202)
|..++.||.|.|||+++. +|++|++++++ ++|+.|.+|.+ ++|+||+
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~---------~~p~~f~lG~~-----------------------~~i~g~~ 50 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLPQ---------NQPFVFSLGTG-----------------------QVIKGWD 50 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTSCEEEESTTT---------TCCEEEETTSS-----------------------SSCHHHH
T ss_pred CCcCCCCCEEEEEEEEEECCCCEEEeCCCC---------CCCEEEEeCCC-----------------------CccHHHH
Confidence 467999999999999985 99999999863 68999999985 4899999
Q ss_pred HHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 169 SVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 169 ~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|.+|++|++++|+|||++|||+++.+ .||||
T Consensus 51 ~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~~ 84 (102)
T 2pbc_A 51 QGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGG 84 (102)
T ss_dssp TTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCTT
T ss_pred HHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcC
Confidence 9999999999999999999999999875 49887
No 25
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.78 E-value=3.8e-19 Score=154.81 Aligned_cols=100 Identities=21% Similarity=0.219 Sum_probs=89.6
Q ss_pred CCceeCCCCeEEEEEecCCCCccCCCCEEEEEEEEEe--CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccc
Q 028915 71 EDYHTTSDGLKYYDIVEGKGPVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFV 148 (202)
Q Consensus 71 ~~~~~~~sGl~~~~l~~G~G~~p~~Gd~V~v~Y~g~~--~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~ 148 (202)
.+..++++|+.++++++|+|..|..||.|+|||++++ +|++||+++.. ++|+.|.+|.+.
T Consensus 42 ~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~---------~~~~~~~lg~~~--------- 103 (338)
T 2if4_A 42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHE---------QQPIELVLGKEK--------- 103 (338)
T ss_dssp SCCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHHH---------TCCEEEETTSCC---------
T ss_pred cCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccCC---------CCCeEEEcCCCC---------
Confidence 3567789999999999999999999999999999986 59999999864 789999999741
Q ss_pred cccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCC---CCCCCC
Q 028915 149 DNQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRM---NEIPVK 201 (202)
Q Consensus 149 ~~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~---~~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||+++||..+. +.||+|
T Consensus 104 -------------~~i~g~e~~l~~m~~Ge~~~~~i~~~~~yg~~~~~~~~~ip~~ 146 (338)
T 2if4_A 104 -------------KELAGLAIGVASMKSGERALVHVGWELAYGKEGNFSFPNVPPM 146 (338)
T ss_dssp -------------GGGHHHHHHHHHCCBTCEEEEEECGGGSSCSSCCCSSSCCCTT
T ss_pred -------------cccHHHHHHHhcCCCCCeEEEEECHHHhcCCCCCCCCCCCCCC
Confidence 2789999999999999999999999999999986 569987
No 26
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.77 E-value=2.8e-19 Score=161.74 Aligned_cols=96 Identities=24% Similarity=0.293 Sum_probs=67.9
Q ss_pred eCCCCeEEEEEecCCCCc-cCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccC
Q 028915 75 TTSDGLKYYDIVEGKGPV-AQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQN 152 (202)
Q Consensus 75 ~~~sGl~~~~l~~G~G~~-p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~ 152 (202)
++++|++|+++++|+|.. |+.||.|.|||++++ +|++||+|++. ++|+.|.+|.+
T Consensus 28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~---------~~p~~~~~g~~-------------- 84 (457)
T 1kt0_A 28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDR---------NEPFVFSLGKG-------------- 84 (457)
T ss_dssp -----CEEEC--------CCCBTCEEEEEEEEEC-----CBC---------------CEEEETTST--------------
T ss_pred CCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCC---------CCCeEEEeCCc--------------
Confidence 368899999999999987 999999999999985 99999999864 68999999986
Q ss_pred cccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCCC
Q 028915 153 GLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVKP 202 (202)
Q Consensus 153 g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn~ 202 (202)
++|+||+++|.+|++|++++|+|||+++||..|.+ .||||.
T Consensus 85 ---------~~i~g~~~~l~~m~~Ge~~~~~i~~~~~yg~~g~~~~i~~~~ 126 (457)
T 1kt0_A 85 ---------QVIKAWDIGVATMKRGEICHLLCKPEYAYGSAGSLPKIPSNA 126 (457)
T ss_dssp ---------TSCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTC
T ss_pred ---------chhhHHHHHHhhCCCCCEEEEEEChHHhccccCCCCCCCCCC
Confidence 48999999999999999999999999999999864 599874
No 27
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.75 E-value=7.9e-20 Score=162.44 Aligned_cols=98 Identities=27% Similarity=0.429 Sum_probs=0.0
Q ss_pred CceeCCCCeEEEEEecCCC-CccCCCCEEEEEEEEE-eCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCccccccccc
Q 028915 72 DYHTTSDGLKYYDIVEGKG-PVAQKGSTVQVHFDCI-FRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVD 149 (202)
Q Consensus 72 ~~~~~~sGl~~~~l~~G~G-~~p~~Gd~V~v~Y~g~-~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~ 149 (202)
+...+++|++|+++++|+| ..|+.||.|.+||+++ .||++||+|+++ ++|+.|.+|.+
T Consensus 5 ~~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~---------~~p~~~~lG~g----------- 64 (356)
T 3jxv_A 5 ENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDR---------DDTFKFKLGQG----------- 64 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccC---------CCcEEEEeCCC-----------
Confidence 3456889999999999999 6799999999999997 599999999864 68999999986
Q ss_pred ccCcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC-CCCCC
Q 028915 150 NQNGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN-EIPVK 201 (202)
Q Consensus 150 ~~~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~-~IPpn 201 (202)
++|+||+++|.+|++|++++|+|||++|||+++.+ .||||
T Consensus 65 ------------~~i~g~e~~l~gm~~Ge~~~~~ip~~~aYG~~g~~~~Ip~~ 105 (356)
T 3jxv_A 65 ------------QVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPAN 105 (356)
T ss_dssp -----------------------------------------------------
T ss_pred ------------ccchHHHHHHhcCCCCCEEEEEEChHHhCCCCCCCCCcCCC
Confidence 48999999999999999999999999999999976 59987
No 28
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.72 E-value=1.5e-17 Score=147.69 Aligned_cols=96 Identities=21% Similarity=0.307 Sum_probs=84.6
Q ss_pred CCCCeEEEEEecCCC-CccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCc
Q 028915 76 TSDGLKYYDIVEGKG-PVAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNG 153 (202)
Q Consensus 76 ~~sGl~~~~l~~G~G-~~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g 153 (202)
.+.++.++++++|+| ..|+.||.|+|||++++ ||++|+++... .++|+.|.+|.+
T Consensus 242 ~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~--------~~~p~~f~~G~g--------------- 298 (356)
T 3jxv_A 242 DDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHD--------EQEPFEFKTDEE--------------- 298 (356)
T ss_dssp TTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCT--------TSCCCEEETTTT---------------
T ss_pred cccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeecccc--------CCcCEEEEECCC---------------
Confidence 457999999999999 67999999999999986 99999988421 268999999986
Q ss_pred ccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCC---CCCCCCC
Q 028915 154 LFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRM---NEIPVKP 202 (202)
Q Consensus 154 ~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~---~~IPpn~ 202 (202)
++|+||+++|.+|++|++++|+|||++|||+++. ..||||.
T Consensus 299 --------~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~Ip~~~ 342 (356)
T 3jxv_A 299 --------AVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNS 342 (356)
T ss_dssp --------SSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEECTTC
T ss_pred --------ccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcCCcCC
Confidence 5899999999999999999999999999999885 3488873
No 29
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.67 E-value=4.4e-17 Score=130.33 Aligned_cols=80 Identities=23% Similarity=0.378 Sum_probs=68.7
Q ss_pred cCCCCEEEEEEEEEeCCeEEeeccch-----hhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchH
Q 028915 93 AQKGSTVQVHFDCIFRGITAVSSRES-----KLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAM 167 (202)
Q Consensus 93 p~~Gd~V~v~Y~g~~~G~~fdss~~~-----~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gl 167 (202)
+++||.|++||+++++|++||||++. .+++.++. .+|+.|.+|.+ ++|+||
T Consensus 2 i~~Gd~V~v~Y~g~ldG~vfDss~~~~a~~~g~~~~~~~-~~P~~f~vG~g-----------------------~vi~G~ 57 (157)
T 3pr9_A 2 VEKGKMVKISYDGYVDGKLFDTTNEELAKKEGIYNPAMI-YGPVAIFAGEG-----------------------QVLPGL 57 (157)
T ss_dssp CCTTCEEEEEEEEEETTEEEEESCHHHHHHHTCCCTTSC-CSCEEEETTSS-----------------------SSCHHH
T ss_pred CCCCCEEEEEEEEEECCEEEEeccccccccccccccccC-CCCEEEEECCC-----------------------cHHHHH
Confidence 67899999999998899999999863 13444332 47999999986 589999
Q ss_pred HHHhcCCCcCcEEEEEEcCCCCCCCCCCC
Q 028915 168 YSVTEGMKVGGKRTVIVPPEAGYDKKRMN 196 (202)
Q Consensus 168 e~aL~gMkvG~k~~v~IPp~lgYG~~g~~ 196 (202)
+++|.+|++|++++|.|||++|||+++..
T Consensus 58 eeaL~gm~~Ge~~~v~Ipp~~aYG~~~~~ 86 (157)
T 3pr9_A 58 DEAILEMDVGEEREVVLPPEKAFGKRDPS 86 (157)
T ss_dssp HHHHHHCCTTCEEEEEECGGGTTCCCCGG
T ss_pred HHHHcCCCCCCEEEEEECcHHhcCCCChH
Confidence 99999999999999999999999999864
No 30
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.64 E-value=2.3e-16 Score=127.60 Aligned_cols=73 Identities=30% Similarity=0.454 Sum_probs=66.8
Q ss_pred ccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHHH
Q 028915 92 VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYSV 170 (202)
Q Consensus 92 ~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~a 170 (202)
.++.||.|++||++++ +|++||+|++. ++|+.|.+|.+ ++|+||+++
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~---------~~P~~f~lG~g-----------------------~vipG~eea 71 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNN---------GKPALFRLGDA-----------------------SLSEGLEQH 71 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHH---------TSCEEEETTSS-----------------------SSCHHHHHH
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCC---------CCCEEEEECCC-----------------------CccHHHHHH
Confidence 5899999999999975 99999999864 68999999986 589999999
Q ss_pred hcCCCcCcEEEEEEcCCCCCCCCCCC
Q 028915 171 TEGMKVGGKRTVIVPPEAGYDKKRMN 196 (202)
Q Consensus 171 L~gMkvG~k~~v~IPp~lgYG~~g~~ 196 (202)
|.+|++|++++|.|||++|||+++..
T Consensus 72 L~gm~~Ge~~~v~Ipp~~AYG~~~~~ 97 (169)
T 4dt4_A 72 LLGLKVGDKTTFSLEPDAAFGVPSPD 97 (169)
T ss_dssp HTTCCTTCEEEEEECGGGTTCCCCGG
T ss_pred HcCCCCCCEEEEEEChHHhcCCCChH
Confidence 99999999999999999999998754
No 31
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.64 E-value=4.5e-16 Score=134.63 Aligned_cols=92 Identities=16% Similarity=0.284 Sum_probs=80.1
Q ss_pred CCCCeEEEEEecCCCC-ccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcc
Q 028915 76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGL 154 (202)
Q Consensus 76 ~~sGl~~~~l~~G~G~-~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~ 154 (202)
.+.|+.++++++|+|. .|+.||.|+|||+++++|++|++ .|+.|.+|.+. .
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~dG~~fd~--------------~~~~f~lG~g~--~------------ 217 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQ--------------RELRFEIGEGE--N------------ 217 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEETTEEEEE--------------EEEEEETTCGG--G------------
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEeCCEEEec--------------CCeEEEecCCc--c------------
Confidence 4679999999999998 59999999999999999999985 26899999851 0
Q ss_pred cccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC--CCCCC
Q 028915 155 FSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN--EIPVK 201 (202)
Q Consensus 155 ~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~--~IPpn 201 (202)
.++|+||+++|.+|++|++++|+|||+++||+++.. .||||
T Consensus 218 ------~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP~~ 260 (280)
T 1q1c_A 218 ------LDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN 260 (280)
T ss_dssp ------GTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBCTT
T ss_pred ------cccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccCCC
Confidence 036899999999999999999999999999999854 49987
No 32
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.63 E-value=7.2e-16 Score=122.31 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=66.7
Q ss_pred CccCCCCEEEEEEEEEe--CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHH
Q 028915 91 PVAQKGSTVQVHFDCIF--RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMY 168 (202)
Q Consensus 91 ~~p~~Gd~V~v~Y~g~~--~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle 168 (202)
..++.||.|++||+++. +|++||+|++ .+|+.|.+|.+ ++|+||+
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~----------~~p~~f~~G~g-----------------------~vipg~e 51 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNIS----------KEPLEFIIGTN-----------------------QIIAGLE 51 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTT----------TCCEEEETTCC-----------------------CSCHHHH
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCC----------CcCEEEEECCC-----------------------CccHHHH
Confidence 45889999999999986 9999999975 57999999986 5899999
Q ss_pred HHhcCCCcCcEEEEEEcCCCCCCCCCCC
Q 028915 169 SVTEGMKVGGKRTVIVPPEAGYDKKRMN 196 (202)
Q Consensus 169 ~aL~gMkvG~k~~v~IPp~lgYG~~g~~ 196 (202)
++|.+|++|++++|.|||++|||+++..
T Consensus 52 ~aL~gm~~Ge~~~v~ipp~~aYG~~~~~ 79 (151)
T 2kr7_A 52 KAVLKAQIGEWEEVVIAPEEAYGVYESS 79 (151)
T ss_dssp HHHTTCCBTCEEEEEECGGGTTCSSCSC
T ss_pred HHHcCCCCCCEEEEEEecHHHcCCCCcc
Confidence 9999999999999999999999998864
No 33
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.61 E-value=4.8e-16 Score=123.32 Aligned_cols=81 Identities=27% Similarity=0.377 Sum_probs=68.5
Q ss_pred cCCCCEEEEEEEEEe-CCeEEeeccch-----hhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCch
Q 028915 93 AQKGSTVQVHFDCIF-RGITAVSSRES-----KLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPA 166 (202)
Q Consensus 93 p~~Gd~V~v~Y~g~~-~G~~fdss~~~-----~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~G 166 (202)
++.||.|++||+++. +|++||||++. .+++.++. .+|+.|.+|.+ ++|+|
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~-~~P~~f~~G~g-----------------------~vi~G 57 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDRE-YEPLEFVVGEG-----------------------QLIQG 57 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCC-CCCEEEETTTT-----------------------CSCHH
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccC-CCCEEEEECCC-----------------------ChhHH
Confidence 678999999999985 99999999741 23444332 46999999986 58999
Q ss_pred HHHHhcCCCcCcEEEEEEcCCCCCCCCCCCC
Q 028915 167 MYSVTEGMKVGGKRTVIVPPEAGYDKKRMNE 197 (202)
Q Consensus 167 le~aL~gMkvG~k~~v~IPp~lgYG~~g~~~ 197 (202)
|+++|.+|++|++++|.|||++|||+++...
T Consensus 58 ~eeaL~gm~~Ge~~~v~ipp~~aYG~~~~~~ 88 (151)
T 1ix5_A 58 FEEAVLDMEVGDEKTVKIPAEKAYGNRNEML 88 (151)
T ss_dssp HHHHHHTCCTTCCCEEEECTTTSSCSCCSTT
T ss_pred HHHHHcCCCCCCEEEEEECcHHHCCCCCccE
Confidence 9999999999999999999999999998754
No 34
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.61 E-value=6.2e-16 Score=130.76 Aligned_cols=80 Identities=23% Similarity=0.378 Sum_probs=68.5
Q ss_pred cCCCCEEEEEEEEEeCCeEEeeccch-----hhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchH
Q 028915 93 AQKGSTVQVHFDCIFRGITAVSSRES-----KLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAM 167 (202)
Q Consensus 93 p~~Gd~V~v~Y~g~~~G~~fdss~~~-----~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gl 167 (202)
++.||.|.+||+++++|++||||++. .+++.++. ++|+.|.+|.+ ++|+||
T Consensus 2 i~~Gd~V~v~Y~g~ldG~vfDss~~~~A~e~gi~~~~~~-~~P~~f~lG~g-----------------------~vIpG~ 57 (231)
T 3prb_A 2 VEKGKMVKISYDGYVDGKLFDTTNEELAKKEGIYNPAMI-YGPVAIFAGEG-----------------------QVLPGL 57 (231)
T ss_dssp CCTTCEEEEEEEEEETTEEEEESCHHHHHHTTCCCTTSC-CSCEEEETTSS-----------------------SSCHHH
T ss_pred CCCCCEEEEEEEEEECCEEEEeccchhcccccccccccC-CCCEEEEeCCC-----------------------cHHHHH
Confidence 67899999999998899999999863 13333331 47999999986 589999
Q ss_pred HHHhcCCCcCcEEEEEEcCCCCCCCCCCC
Q 028915 168 YSVTEGMKVGGKRTVIVPPEAGYDKKRMN 196 (202)
Q Consensus 168 e~aL~gMkvG~k~~v~IPp~lgYG~~g~~ 196 (202)
+++|.+|++|++++|.|||++|||+++..
T Consensus 58 eeaL~Gm~vGek~~v~Ippe~AYGe~~~~ 86 (231)
T 3prb_A 58 DEAILEMDVGEEREVVLPPEKAFGKRDPS 86 (231)
T ss_dssp HHHHHTCCTTCEEEEEECGGGTTCCCCGG
T ss_pred HHHHcCCCCCCEEEEEeCcHHhcCCCChH
Confidence 99999999999999999999999999864
No 35
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.61 E-value=2.5e-15 Score=124.12 Aligned_cols=73 Identities=21% Similarity=0.252 Sum_probs=66.3
Q ss_pred ccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHHH
Q 028915 92 VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYSV 170 (202)
Q Consensus 92 ~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~a 170 (202)
++++||.|+|||+++. +|++||||++ .+|+.|.+|.+ ++|+||+++
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~----------~~P~~f~lG~g-----------------------~vipG~eea 48 (196)
T 2kfw_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPV----------SAPLDYLHGHG-----------------------SLISGLETA 48 (196)
T ss_dssp CCCSSCEEEEEEEEEETTTEEEEECCT----------TSCCEEESSSS-----------------------SSCHHHHHH
T ss_pred CCCCCCEEEEEEEEEECCCCEEEecCC----------CCCEEEEECCC-----------------------CcchHHHHH
Confidence 3789999999999986 9999999985 47999999986 589999999
Q ss_pred hcCCCcCcEEEEEEcCCCCCCCCCCCC
Q 028915 171 TEGMKVGGKRTVIVPPEAGYDKKRMNE 197 (202)
Q Consensus 171 L~gMkvG~k~~v~IPp~lgYG~~g~~~ 197 (202)
|.+|++|++++|.|||++|||+++...
T Consensus 49 L~Gm~vGe~~~v~Ippe~aYGe~~~~l 75 (196)
T 2kfw_A 49 LEGHEVGDKFDVAVGANDAYGQYDENL 75 (196)
T ss_dssp HSSSCTTCEEEEECSTTTTSSCCCTTT
T ss_pred HcCCCCCCEEEEEeCcHHhcCCCChhh
Confidence 999999999999999999999988653
No 36
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.60 E-value=2.2e-15 Score=121.95 Aligned_cols=72 Identities=21% Similarity=0.268 Sum_probs=65.7
Q ss_pred ccCCCCEEEEEEEEEe-CCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHHH
Q 028915 92 VAQKGSTVQVHFDCIF-RGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYSV 170 (202)
Q Consensus 92 ~p~~Gd~V~v~Y~g~~-~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~a 170 (202)
+++.||.|+++|+++. +|++|++|++ .+|+.|.+|.+ ++|+||+++
T Consensus 2 ~i~~gd~V~v~Y~g~~~dG~~fdss~~----------~~P~~f~lG~g-----------------------~vipG~eea 48 (171)
T 2k8i_A 2 KVAKDLVVSLAYQVRTEDGVLVDESPV----------SAPLDYLHGHG-----------------------SLISGLETA 48 (171)
T ss_dssp CCCTTEEEEEEEEEEETTSCEEEECCS----------SSCEEEETTSC-----------------------SSCSHHHHH
T ss_pred cCCCCCEEEEEEEEEECCCCEEeeccC----------CcCEEEEECCC-----------------------CcchHHHHH
Confidence 3789999999999986 9999999975 47999999986 589999999
Q ss_pred hcCCCcCcEEEEEEcCCCCCCCCCCC
Q 028915 171 TEGMKVGGKRTVIVPPEAGYDKKRMN 196 (202)
Q Consensus 171 L~gMkvG~k~~v~IPp~lgYG~~g~~ 196 (202)
|.+|++|++++|.|||++|||+++..
T Consensus 49 L~Gm~~Ge~~~v~ippe~aYG~~~~~ 74 (171)
T 2k8i_A 49 LEGHEVGDKFDVAVGANDAYGQYDEN 74 (171)
T ss_dssp HTTCCTTCEEEEEEETTTSSCCCCTT
T ss_pred HcCCCCCCEEEEEECcHHhcCCCChh
Confidence 99999999999999999999999764
No 37
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.55 E-value=6.8e-15 Score=111.37 Aligned_cols=70 Identities=23% Similarity=0.320 Sum_probs=60.9
Q ss_pred CCccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHH
Q 028915 90 GPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYS 169 (202)
Q Consensus 90 G~~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~ 169 (202)
+..++.||.|+|||+++.||++||+++ .+|+.|.+|.+ ++|+||++
T Consensus 27 ~~~~~~gD~V~v~Y~g~~dG~~fdss~-----------~~p~~f~lG~g-----------------------~vi~G~ee 72 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIVDNKKLASAS-----------AQNYELTIGSN-----------------------SFIKGFET 72 (113)
T ss_dssp --CCCSSEEEEEEEEEEETTEECSTTC-----------CSEEEEEETSS-----------------------CSCTTHHH
T ss_pred CCCCCCCCEEEEEEEEEECCEEcccCC-----------ccCEEEEECCC-----------------------ChhHHHHH
Confidence 457999999999999988999999885 57999999986 58999999
Q ss_pred HhcCCCcCcEEEEEEc-CCCCCCCCC
Q 028915 170 VTEGMKVGGKRTVIVP-PEAGYDKKR 194 (202)
Q Consensus 170 aL~gMkvG~k~~v~IP-p~lgYG~~g 194 (202)
+|.+|++|++++|.|| |+. ||.++
T Consensus 73 ~L~Gmk~Ge~~~v~i~fP~~-Yg~~~ 97 (113)
T 1hxv_A 73 GLIAMKVNQKKTLALTFPSD-YHVKE 97 (113)
T ss_dssp HHHTSCSSEEEEECCCCCTT-SSSSG
T ss_pred HHCCCCCCCEEEEEEeCchh-hCcCC
Confidence 9999999999999996 444 98765
No 38
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.50 E-value=9.6e-14 Score=120.35 Aligned_cols=95 Identities=16% Similarity=0.262 Sum_probs=81.4
Q ss_pred ceeCCCCeEEEEEecCCCC-ccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCccccccccccc
Q 028915 73 YHTTSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQ 151 (202)
Q Consensus 73 ~~~~~sGl~~~~l~~G~G~-~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~ 151 (202)
..+.++|+.++++++|+|. .|..||.|+|||+++++|++||++ |+.|.+|.+.
T Consensus 20 ~~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~~g~~fd~~--------------~~~f~lG~g~------------ 73 (336)
T 1p5q_A 20 HMEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQR--------------ELRFEIGEGE------------ 73 (336)
T ss_dssp --CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEETTEEEEEE--------------EEEEETTCGG------------
T ss_pred eecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEECCEEEecC--------------CeEEEeCCCC------------
Confidence 3456789999999999997 699999999999998899999974 6899999751
Q ss_pred CcccccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC--CCCCC
Q 028915 152 NGLFSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN--EIPVK 201 (202)
Q Consensus 152 ~g~~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~--~IPpn 201 (202)
.+ .++++|+++|..|++|+++.+.|||+++||..|.. .||+|
T Consensus 74 --~~------~~~~~~e~al~~~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~ 117 (336)
T 1p5q_A 74 --NL------DLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPN 117 (336)
T ss_dssp --GG------TCCHHHHHHHTTCCTTCEEEEEECTTTTTTTTCBGGGTBCSS
T ss_pred --cc------ccchHHHHHHhcCCCCCeEEEEECCccccCcCCCCccCCCCC
Confidence 00 36899999999999999999999999999999965 47775
No 39
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.45 E-value=9.5e-14 Score=110.97 Aligned_cols=67 Identities=16% Similarity=0.243 Sum_probs=61.0
Q ss_pred cCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHHHhc
Q 028915 93 AQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYSVTE 172 (202)
Q Consensus 93 p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~aL~ 172 (202)
++.||.|++||+++.+|++||||+ +.|.+|.+ ++|+||+++|.
T Consensus 3 i~~gd~V~v~Y~g~~dG~~fdss~--------------~~f~~G~g-----------------------~vipG~e~aL~ 45 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQVEGEVLDQGE--------------LSYLHGHR-----------------------NLIPGLEEALE 45 (158)
T ss_dssp CCTTEEEEEEEEEEETTEEEEEEE--------------EEEETTSS-----------------------SSCHHHHHHHT
T ss_pred CCCCCEEEEEEEEEECCEEEEeeE--------------EEEEECCC-----------------------CcChHHHHHHc
Confidence 688999999999999999999873 77899875 58999999999
Q ss_pred CCCcCcEEEEEEcCCCCCCCCCCC
Q 028915 173 GMKVGGKRTVIVPPEAGYDKKRMN 196 (202)
Q Consensus 173 gMkvG~k~~v~IPp~lgYG~~g~~ 196 (202)
+|++|++++|.|||++|||+++..
T Consensus 46 Gm~~Ge~~~v~ipp~~aYG~~~~~ 69 (158)
T 3cgm_A 46 GREEGEAFQAHVPAEKAYGPHDPE 69 (158)
T ss_dssp TCBTTCEEEEEECGGGTTCCCCGG
T ss_pred CCCCCCEEEEEECcHHHcCCCCcc
Confidence 999999999999999999998754
No 40
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.13 E-value=7.7e-11 Score=107.34 Aligned_cols=72 Identities=18% Similarity=0.244 Sum_probs=65.0
Q ss_pred CCCccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHH
Q 028915 89 KGPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMY 168 (202)
Q Consensus 89 ~G~~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle 168 (202)
.+..++.||.|++||+++.+|+.|++++ +.|+.|.+|.+ ++|+||+
T Consensus 154 ~~~~~~~gD~V~i~y~g~~dG~~fd~~~-----------~~~~~~~lG~g-----------------------~~ipgfe 199 (432)
T 1w26_A 154 KDGAVEAEDRVTIDFTGSVDGEEFEGGK-----------ASDFVLAMGQG-----------------------RMIPGFE 199 (432)
T ss_dssp CSSCCCTTCEEEECEEEESSSCBCSSCC-----------CSSEEEETTSC-----------------------CSCTTHH
T ss_pred cCCCCCCCCEEEEEEEEeeCCeEccCCC-----------ccceEEEeCCC-----------------------CcchHHH
Confidence 3456899999999999999999999875 57999999986 5899999
Q ss_pred HHhcCCCcCcEEEEEEcCCCCCCCCC
Q 028915 169 SVTEGMKVGGKRTVIVPPEAGYDKKR 194 (202)
Q Consensus 169 ~aL~gMkvG~k~~v~IPp~lgYG~~g 194 (202)
++|.||++|++++|.||+..+||..+
T Consensus 200 e~L~G~k~Ge~~~v~v~~~~~yg~~~ 225 (432)
T 1w26_A 200 DGIKGHKAGEEFTIDVTFPEEYHAEN 225 (432)
T ss_dssp HHSSSCCSSCEEEEEEECCTTCSCTT
T ss_pred HHhCCCCCCCEEEEEECCchhhCCCC
Confidence 99999999999999999999999875
No 41
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.09 E-value=2.5e-10 Score=102.90 Aligned_cols=92 Identities=18% Similarity=0.249 Sum_probs=77.5
Q ss_pred CCCCeEEEEEecCCCC-ccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcc
Q 028915 76 TSDGLKYYDIVEGKGP-VAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGL 154 (202)
Q Consensus 76 ~~sGl~~~~l~~G~G~-~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~ 154 (202)
.+.++...++++|.|. .|..||.|.|||+++++|++|++. ++.|.+|.+.
T Consensus 144 ~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~~g~~f~~~--------------~~~f~~g~g~--------------- 194 (457)
T 1kt0_A 144 EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCR--------------DVAFTVGEGE--------------- 194 (457)
T ss_dssp SSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEETTEEEEEE--------------EEEEETTCGG---------------
T ss_pred CCcceEEEEEecCCCCCCCCCCCEEEEEEEEEeCCeEEecC--------------ceEEEeCCCc---------------
Confidence 3457888889999884 699999999999998899999862 4789998751
Q ss_pred cccCCCCCCCchHHHHhcCCCcCcEEEEEEcCCCCCCCCCCC--CCCCC
Q 028915 155 FSAQAAPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYDKKRMN--EIPVK 201 (202)
Q Consensus 155 ~~~~~~~~~i~Gle~aL~gMkvG~k~~v~IPp~lgYG~~g~~--~IPpn 201 (202)
...+++||++||..|+.|+++.|.|+|.++|+..|.. .||||
T Consensus 195 -----~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~ 238 (457)
T 1kt0_A 195 -----DHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPN 238 (457)
T ss_dssp -----GGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTT
T ss_pred -----cccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCC
Confidence 0147899999999999999999999999999999864 47775
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.85 E-value=1.1e-09 Score=98.72 Aligned_cols=70 Identities=19% Similarity=0.287 Sum_probs=61.1
Q ss_pred CccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHHH
Q 028915 91 PVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYSV 170 (202)
Q Consensus 91 ~~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~a 170 (202)
..++.||.|++||+++.+|+.|+++. +.|+.|.+|.+ ++|+||+++
T Consensus 159 ~~~~~gD~V~i~y~g~~dG~~fd~~~-----------~~~~~~~lG~g-----------------------~~ipgfee~ 204 (392)
T 1t11_A 159 EAAENGKRVSIDFVGSIDGVEFEGGK-----------AENFPLEMGAG-----------------------RMIPGFEDG 204 (392)
T ss_dssp CCCCTTCEEEEEEEEESSSSCCTTCE-----------EEEEEEETTSC-----------------------CBSTTSGGG
T ss_pred CCCCCCCEEEEEEEEEECCEEccCCC-----------ccceEEEecCC-----------------------CcchhHHHH
Confidence 45899999999999999999998874 56899999986 578999999
Q ss_pred hcCCCcCcEEEEEEcCCCCCCCCC
Q 028915 171 TEGMKVGGKRTVIVPPEAGYDKKR 194 (202)
Q Consensus 171 L~gMkvG~k~~v~IPp~lgYG~~g 194 (202)
|.||++|++++|.||....||..+
T Consensus 205 L~Gmk~Ge~~~v~v~fp~dy~~~~ 228 (392)
T 1t11_A 205 IVGKTKGMEFVIDVTFPEDYHAEN 228 (392)
T ss_dssp TTTCCSSCCCCEEEECCTTCSCTT
T ss_pred hCCCCCCCEEEEEEeCccccccCC
Confidence 999999999999997556788654
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.26 E-value=0.00025 Score=64.41 Aligned_cols=57 Identities=19% Similarity=0.209 Sum_probs=47.2
Q ss_pred ccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHHHh
Q 028915 92 VAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYSVT 171 (202)
Q Consensus 92 ~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~aL 171 (202)
.++.||.|+++|++..||..|+++. +.++.|.+|.+ . + |+++|
T Consensus 154 ~a~~gD~V~id~~~~~dG~~~~~~~-----------~~~~~l~~g~~-----------------------~--~-fe~~l 196 (433)
T 3gty_X 154 PAEAGDLVRVNMEVYNEEGKKLTSR-----------EYEYVISEDED-----------------------R--P-FVKDL 196 (433)
T ss_dssp CCCTTSEEEEEEEEECTTSCEEEEE-----------EEEEECCSSCC-----------------------C--T-THHHH
T ss_pred ccCCCCEEEEEEEEEECCEECcCCC-----------CCCeEEEecCC-----------------------c--h-HHHHh
Confidence 4789999999999999999998754 34677777764 1 3 89999
Q ss_pred cCCCcCcEEEEEEc
Q 028915 172 EGMKVGGKRTVIVP 185 (202)
Q Consensus 172 ~gMkvG~k~~v~IP 185 (202)
.||++|+++.|.+.
T Consensus 197 iG~k~Ge~~~~~vt 210 (433)
T 3gty_X 197 VGKKKGDVVEIERE 210 (433)
T ss_dssp TTCCTTCEEEEEEE
T ss_pred CCCCCCceEEEEEe
Confidence 99999999999873
No 44
>3tb5_A Methionine aminopeptidase; hydrolase, metalloprotease, enter feacalis; HET: CIT; 2.30A {Enterococcus faecalis}
Probab=41.76 E-value=23 Score=28.79 Aligned_cols=61 Identities=20% Similarity=0.318 Sum_probs=40.6
Q ss_pred CCccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHH
Q 028915 90 GPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYS 169 (202)
Q Consensus 90 G~~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~ 169 (202)
...++.||.|.+.+-+.++|..-|.++ +|.+|..... .++..+ -+..+++.
T Consensus 82 ~~~l~~Gdlv~iD~g~~~~GY~sD~tR---------------T~~vG~~~~~--~~~l~~------------~v~~a~~~ 132 (264)
T 3tb5_A 82 KKVLKDGDLIKVDMCVDLKGAISDSCW---------------SYVVGESTPE--IDRLME------------VTKKALYL 132 (264)
T ss_dssp SCBCCTTCEEEEEEEEEETTEEEEEEE---------------EEECSSCCHH--HHHHHH------------HHHHHHHH
T ss_pred CccccCCCEEEEeccceecceeeeccc---------------ccccCCccHH--HHHHHH------------HHHHHHHH
Confidence 356899999999998888997766554 4667764311 112111 13467778
Q ss_pred HhcCCCcCcE
Q 028915 170 VTEGMKVGGK 179 (202)
Q Consensus 170 aL~gMkvG~k 179 (202)
++..+|+|-+
T Consensus 133 ~i~~~kpG~~ 142 (264)
T 3tb5_A 133 GIEQAQVGNR 142 (264)
T ss_dssp HHHTCCTTCB
T ss_pred HHhhhCCCCC
Confidence 8888888854
No 45
>1qxy_A Methionyl aminopeptidase; PITA bread fold, hydrolase; HET: M2C; 1.04A {Staphylococcus aureus} SCOP: d.127.1.1 PDB: 1qxw_A* 1qxz_A*
Probab=31.69 E-value=53 Score=26.25 Aligned_cols=27 Identities=19% Similarity=0.256 Sum_probs=22.0
Q ss_pred CCccCCCCEEEEEEEEEeCCeEEeecc
Q 028915 90 GPVAQKGSTVQVHFDCIFRGITAVSSR 116 (202)
Q Consensus 90 G~~p~~Gd~V~v~Y~g~~~G~~fdss~ 116 (202)
...++.||.|.+.+-+.++|..-|.++
T Consensus 81 ~~~l~~gd~v~iD~g~~~~gy~sD~tR 107 (252)
T 1qxy_A 81 KRVIREGDLVNIDVSALKNGYYADTGI 107 (252)
T ss_dssp SCBCCTTCEEEEEEEEEETTEEEEEEE
T ss_pred CcCcCCCCEEEEEeeEEECCEEEEEEE
Confidence 456899999999999888997776654
No 46
>1xgs_A Methionine aminopeptidase; hyperthermophIle; 1.75A {Pyrococcus furiosus} SCOP: a.4.5.25 d.127.1.1 PDB: 1xgm_A 1xgn_A 1xgo_A 1wkm_A 2dfi_A
Probab=31.52 E-value=64 Score=26.92 Aligned_cols=26 Identities=15% Similarity=0.294 Sum_probs=21.9
Q ss_pred CccCCCCEEEEEEEEEeCCeEEeecc
Q 028915 91 PVAQKGSTVQVHFDCIFRGITAVSSR 116 (202)
Q Consensus 91 ~~p~~Gd~V~v~Y~g~~~G~~fdss~ 116 (202)
..++.||.|.+++-+.++|..-|.++
T Consensus 71 ~~L~~GDiv~iD~G~~~~GY~sD~tR 96 (295)
T 1xgs_A 71 TVLKEGDYLKIDVGVHIDGFIADTAV 96 (295)
T ss_dssp CBCCTTCEEEEEEEEEETTEEEEEEE
T ss_pred ccccCCCEEEEEEeEEECCEEEEEEE
Confidence 56899999999999888998777654
No 47
>4fuk_A Methionine aminopeptidase; structural genomics consortium, SGC, hydrolase; 1.75A {Trypanosoma brucei brucei}
Probab=31.30 E-value=43 Score=28.51 Aligned_cols=61 Identities=10% Similarity=0.156 Sum_probs=39.6
Q ss_pred CCccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHH
Q 028915 90 GPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYS 169 (202)
Q Consensus 90 G~~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~ 169 (202)
....+.||.|.+.+.+.++|..-|.++ +|.+|..... .++..+ .+..+++.
T Consensus 141 ~~~l~~GD~v~iD~g~~~~GY~sD~tR---------------T~~vG~~~~~--~~~l~~------------~v~ea~~~ 191 (337)
T 4fuk_A 141 SRELEEGDILNIDVSSYLNGFHGDLNE---------------TVFIGRPDDD--SVRLVH------------AAYECLCA 191 (337)
T ss_dssp SCBCCTTCEEEEEEEEEETTEEEEEEE---------------EEESSSCCHH--HHHHHH------------HHHHHHHH
T ss_pred CccccCCCEEEEecceeECCEEEeeee---------------eEEeCCccHH--HHHHHH------------HHHHHHHH
Confidence 356899999999999999998777654 4666654211 111111 12366777
Q ss_pred HhcCCCcCcE
Q 028915 170 VTEGMKVGGK 179 (202)
Q Consensus 170 aL~gMkvG~k 179 (202)
++..+|+|-+
T Consensus 192 ai~~~kpG~~ 201 (337)
T 4fuk_A 192 GIGVVKPEAL 201 (337)
T ss_dssp HHTTCSTTCB
T ss_pred HHhhcccccc
Confidence 7777777754
No 48
>3mx6_A Methionine aminopeptidase; seattle structural genomics center for infectious disease, S aminopeptidase, protease, epidermic typhus; 1.70A {Rickettsia prowazekii} PDB: 3mr1_A
Probab=30.50 E-value=45 Score=27.03 Aligned_cols=61 Identities=23% Similarity=0.301 Sum_probs=39.0
Q ss_pred CCccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHH
Q 028915 90 GPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYS 169 (202)
Q Consensus 90 G~~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~ 169 (202)
...++.||.|.+++-+.++|..-|.++ +|.+|..+.+ .++..+ .+..+++.
T Consensus 86 ~~~l~~Gd~v~iD~G~~~~GY~sD~tR---------------T~~vG~~~~~--~~~~~~------------~v~~a~~~ 136 (262)
T 3mx6_A 86 DKPLKNGDIVNIDVTVILDGWYGDTSR---------------MYYVGDVAIK--PKRLIQ------------VTYDAMMK 136 (262)
T ss_dssp SCBCCTTCEEEEEEEEEETTEEEEEEE---------------EEECSSCCHH--HHHHHH------------HHHHHHHH
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEE---------------EEEcCCCCHH--HHHHHH------------HHHHHHHH
Confidence 356899999999998888997766553 4666753211 111111 13366777
Q ss_pred HhcCCCcCcE
Q 028915 170 VTEGMKVGGK 179 (202)
Q Consensus 170 aL~gMkvG~k 179 (202)
++..+|+|-+
T Consensus 137 ~i~~~kpG~~ 146 (262)
T 3mx6_A 137 GIEVVRPGAK 146 (262)
T ss_dssp HHHTCSTTCB
T ss_pred HHHHhcCCCc
Confidence 7777887743
No 49
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=29.48 E-value=71 Score=24.21 Aligned_cols=22 Identities=23% Similarity=0.271 Sum_probs=19.7
Q ss_pred chHHHHhcCCCcCcEEEEEEcC
Q 028915 165 PAMYSVTEGMKVGGKRTVIVPP 186 (202)
Q Consensus 165 ~Gle~aL~gMkvG~k~~v~IPp 186 (202)
.-|-.||.|.++|+...+..|.
T Consensus 123 SPlG~ALlGk~~GD~v~~~~p~ 144 (156)
T 2f23_A 123 SPMGKALLGHRVGDVLSLDTPK 144 (156)
T ss_dssp SHHHHHHTTCCTTCEEEEEETT
T ss_pred CHHHHHHcCCCCCCEEEEEcCC
Confidence 5678999999999999999984
No 50
>3bmb_A Regulator of nucleoside diphosphate kinase; RNA polymerase, elongation factor, anti-GRE factor, RNA binding protein; 1.91A {Escherichia coli}
Probab=28.10 E-value=67 Score=23.74 Aligned_cols=24 Identities=17% Similarity=0.199 Sum_probs=20.7
Q ss_pred CchHHHHhcCCCcCcEEEEEEcCC
Q 028915 164 PPAMYSVTEGMKVGGKRTVIVPPE 187 (202)
Q Consensus 164 i~Gle~aL~gMkvG~k~~v~IPp~ 187 (202)
-.-+-.||.|.++|+...+..|..
T Consensus 91 ~SPlG~ALlGk~~GD~v~v~~p~G 114 (136)
T 3bmb_A 91 MAPVGAALLGLRVGDSIHWELPGG 114 (136)
T ss_dssp TSHHHHHHTTCBTTCEEEEEETTT
T ss_pred CCHHHHHHcCCCCCCEEEEEcCCC
Confidence 467889999999999999998853
No 51
>2pn0_A Prokaryotic transcription elongation factor GREA/GREB; structural genomics, APC6349, PSI-2, protein structure initiative; HET: MSE; 1.70A {Nitrosomonas europaea}
Probab=27.64 E-value=70 Score=23.89 Aligned_cols=23 Identities=17% Similarity=0.112 Sum_probs=19.7
Q ss_pred chHHHHhcCCCcCcEEEEEEcCC
Q 028915 165 PAMYSVTEGMKVGGKRTVIVPPE 187 (202)
Q Consensus 165 ~Gle~aL~gMkvG~k~~v~IPp~ 187 (202)
.-+-.||.|.++|+...+..|..
T Consensus 95 SPlG~ALlGk~vGD~v~v~~P~G 117 (141)
T 2pn0_A 95 APVGSALLGLAQGDEIEWPKPGG 117 (141)
T ss_dssp STTHHHHTTCBTTCEEEEECTTS
T ss_pred CHHHHHHcCCCCCCEEEEEcCCC
Confidence 55779999999999999998843
No 52
>3pka_A Methionine aminopeptidase; hydrolase-hydrolase inhibitor complex; HET: Y02; 1.25A {Mycobacterium tuberculosis} PDB: 3pkb_A* 3pkc_A* 3pkd_A* 3pke_A* 3iu7_A* 3iu8_A* 3iu9_A* 1y1n_A 1yj3_A 3ror_A
Probab=26.21 E-value=58 Score=26.89 Aligned_cols=27 Identities=15% Similarity=0.327 Sum_probs=22.1
Q ss_pred CCccCCCCEEEEEEEEEeCCeEEeecc
Q 028915 90 GPVAQKGSTVQVHFDCIFRGITAVSSR 116 (202)
Q Consensus 90 G~~p~~Gd~V~v~Y~g~~~G~~fdss~ 116 (202)
...++.||.|.+++-+.++|..-|.++
T Consensus 119 ~~~l~~Gd~v~iD~G~~~~GY~sD~tR 145 (285)
T 3pka_A 119 STVITDGDIVNIDVTAYIGGVHGDTNA 145 (285)
T ss_dssp SCBCCTTCEEEEEEEEEETTEEEEEEE
T ss_pred CcccCCCCEEEEEEEEEECCEEEEEEE
Confidence 356899999999999888997776654
No 53
>2b3h_A Methionine aminopeptidase 1; hydrolase, metalloprotease, pitab; HET: GOL; 1.10A {Homo sapiens} PDB: 2b3k_A 2b3l_A 2gz5_A* 2nq6_A* 2nq7_A* 2g6p_A*
Probab=26.04 E-value=57 Score=27.83 Aligned_cols=61 Identities=20% Similarity=0.244 Sum_probs=39.3
Q ss_pred CCccCCCCEEEEEEEEEeCCeEEeeccchhhccCCCCCCCCeEEEeCCCCCcccccccccccCcccccCCCCCCCchHHH
Q 028915 90 GPVAQKGSTVQVHFDCIFRGITAVSSRESKLLAGNRSIAEPYEFKVGGPPGKERKREFVDNQNGLFSAQAAPKPPPAMYS 169 (202)
Q Consensus 90 G~~p~~Gd~V~v~Y~g~~~G~~fdss~~~~~~~~~~~~~~p~~f~vG~~~g~~~~~~~~~~~~g~~~~~~~~~~i~Gle~ 169 (202)
...++.||.|.+.+.+.++|..-|.++ +|.+|..+.+ .++..+ .+..+++.
T Consensus 153 ~~~L~~GDiv~iD~G~~~~GY~sD~tR---------------T~~vG~~~~~--~~~l~~------------~v~~a~~~ 203 (329)
T 2b3h_A 153 RRPLQEGDIVNVDITLYRNGYHGDLNE---------------TFFVGEVDDG--ARKLVQ------------TTYECLMQ 203 (329)
T ss_dssp SCBCCTTCEEEEEEEEEETTEEEEEEE---------------EEECSSCCHH--HHHHHH------------HHHHHHHH
T ss_pred CcCCCCCCEEEEEeeEEECCEEEeeEE---------------EEEeCCCCHH--HHHHHH------------HHHHHHHH
Confidence 456899999999999988997776653 4667753211 111111 13367777
Q ss_pred HhcCCCcCcE
Q 028915 170 VTEGMKVGGK 179 (202)
Q Consensus 170 aL~gMkvG~k 179 (202)
++..+|+|-+
T Consensus 204 ai~~~kPG~~ 213 (329)
T 2b3h_A 204 AIDAVKPGVR 213 (329)
T ss_dssp HHHTCCTTCB
T ss_pred HHHhcCCCCc
Confidence 7777777754
No 54
>3tav_A Methionine aminopeptidase; ssgcid, seattle structural genomics center for infectious DI protease, hydrolase; 2.15A {Mycobacterium abscessus}
Probab=25.10 E-value=54 Score=27.03 Aligned_cols=27 Identities=22% Similarity=0.297 Sum_probs=22.0
Q ss_pred CCccCCCCEEEEEEEEEeCCeEEeecc
Q 028915 90 GPVAQKGSTVQVHFDCIFRGITAVSSR 116 (202)
Q Consensus 90 G~~p~~Gd~V~v~Y~g~~~G~~fdss~ 116 (202)
...++.||.|.+.+-+.++|..-|.++
T Consensus 113 ~~~l~~Gd~v~iD~G~~~~GY~sD~tR 139 (286)
T 3tav_A 113 TAVLADGDLVSIDCGAILDGWHGDSAW 139 (286)
T ss_dssp TCBCCTTCEEEEEEEEEETTEEEEEEE
T ss_pred CcccCCCCEEEEEEEEEECCEEEeeEE
Confidence 356899999999999888997776654
No 55
>1o0x_A Methionine aminopeptidase; TM1478, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.90A {Thermotoga maritima} SCOP: d.127.1.1
Probab=24.58 E-value=64 Score=26.12 Aligned_cols=27 Identities=15% Similarity=0.331 Sum_probs=21.8
Q ss_pred CCc-cCCCCEEEEEEEEEeCCeEEeecc
Q 028915 90 GPV-AQKGSTVQVHFDCIFRGITAVSSR 116 (202)
Q Consensus 90 G~~-p~~Gd~V~v~Y~g~~~G~~fdss~ 116 (202)
... ++.||.|.+.+-+.++|..-|.++
T Consensus 94 ~~~~l~~Gd~v~iD~G~~~~GY~sD~tR 121 (262)
T 1o0x_A 94 KEKVFKEGDIVSVDVGAVYQGLYGDAAV 121 (262)
T ss_dssp TTCBCCTTCEEEEEEEEEETTEEEEEEE
T ss_pred CCcccCCCCEEEEEEEEEECCEEEEEEE
Confidence 355 889999999999888997776654
No 56
>1zfu_A Plectasin; defensin,antimicrobial peptide,cysteine stabilized alpha- beta motif, antimicrobial protein; NMR {Pseudoplectania nigrella} PDB: 3e7r_L 3e7u_X
Probab=22.28 E-value=15 Score=22.27 Aligned_cols=16 Identities=25% Similarity=0.561 Sum_probs=12.2
Q ss_pred cccccccccccccccc
Q 028915 9 KWTVDHQICPQHTTIQ 24 (202)
Q Consensus 9 ~~~~~~~~~~~~~~~~ 24 (202)
||.+||..|-+|=...
T Consensus 7 ~~~~n~~aCaaHC~s~ 22 (40)
T 1zfu_A 7 PWDEDDMQCHNHCKSI 22 (40)
T ss_dssp SSSCCSHHHHHHHHHS
T ss_pred ccCcCHHHHHHHHHhh
Confidence 5889999998875443
No 57
>2gg2_A Methionine aminopeptidase; PITA-bread fold, MAP inhibitor, antibacterial, hydrolase; HET: U12; 1.00A {Escherichia coli K12} SCOP: d.127.1.1 PDB: 2gg0_A* 2gg3_A* 2gg5_A* 2gg7_A* 2gg8_A* 2gg9_A* 2ggb_A* 2ggc_A 2q93_A* 2q95_A* 2q96_A* 1xnz_A* 1mat_A* 2bb7_A* 2evc_A* 2evm_A* 2evo_A* 3mat_A* 1yvm_A* 2mat_A ...
Probab=21.63 E-value=60 Score=26.20 Aligned_cols=26 Identities=19% Similarity=0.359 Sum_probs=21.5
Q ss_pred CccCCCCEEEEEEEEEeCCeEEeecc
Q 028915 91 PVAQKGSTVQVHFDCIFRGITAVSSR 116 (202)
Q Consensus 91 ~~p~~Gd~V~v~Y~g~~~G~~fdss~ 116 (202)
..++.||.|.+.+-+.++|..-|.++
T Consensus 85 ~~l~~gd~v~iD~G~~~~gy~sD~tR 110 (263)
T 2gg2_A 85 KLLKDGDIVNIDVTVIKDGFHGDTSK 110 (263)
T ss_dssp CBCCTTCEEEEEEEEEETTEEEEEEE
T ss_pred cCcCCCCEEEEEEEEEECCEEEEEEE
Confidence 46889999999999888997766654
No 58
>2e3g_A Defensin, mutant DEF-DAA; insect defensin, CSAB motif, antibacterial, antimicrobial protein; NMR {Anopheles gambiae} PDB: 2nz3_A
Probab=21.30 E-value=22 Score=21.49 Aligned_cols=16 Identities=31% Similarity=0.852 Sum_probs=12.2
Q ss_pred cCcccccccccccccc
Q 028915 7 FGKWTVDHQICPQHTT 22 (202)
Q Consensus 7 ~~~~~~~~~~~~~~~~ 22 (202)
|..|.+||..|-+|=-
T Consensus 6 ls~~~~~~~aCaaHC~ 21 (40)
T 2e3g_A 6 ASKWNWNHTLCAAHCI 21 (40)
T ss_dssp SSSSSSGGGTHHHHHH
T ss_pred cCccCCCchHHHHHHH
Confidence 3468999999988743
No 59
>2lt8_A Eurocin; A/B-fold, cysteine stabilised, antimicrobial protein; NMR {Eurotium amstelodami}
Probab=21.26 E-value=25 Score=20.77 Aligned_cols=14 Identities=29% Similarity=0.764 Sum_probs=11.3
Q ss_pred cCcccccccccccc
Q 028915 7 FGKWTVDHQICPQH 20 (202)
Q Consensus 7 ~~~~~~~~~~~~~~ 20 (202)
-+||-+.|-+|+-+
T Consensus 28 agpwylghptctcs 41 (42)
T 2lt8_A 28 AGPWYLGHPTCTCS 41 (42)
T ss_dssp ECCSSSSSCEEEEE
T ss_pred cCccccCCCceeec
Confidence 37999999999743
Done!