Query 028920
Match_columns 202
No_of_seqs 17 out of 19
Neff 1.8
Searched_HMMs 29240
Date Mon Mar 25 07:03:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028920.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028920hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pls_A Pleckstrin homology dom 98.9 2.3E-09 7.8E-14 73.6 7.0 106 61-184 6-111 (113)
2 1wgq_A FYVE, rhogef and PH dom 98.9 3.7E-09 1.3E-13 72.4 6.7 94 60-172 8-101 (109)
3 2i5f_A Pleckstrin; PH domain, 98.8 2.1E-09 7.3E-14 72.5 3.9 100 58-173 5-108 (109)
4 1u5d_A SKAP55, SRC kinase-asso 98.8 5.2E-09 1.8E-13 69.7 5.1 100 61-172 4-103 (108)
5 1x05_A Pleckstrin; PH domain, 98.7 2.8E-08 9.5E-13 69.5 6.9 103 58-176 16-122 (129)
6 2d9y_A Pleckstrin homology dom 98.7 6.4E-08 2.2E-12 66.0 7.8 99 61-177 12-112 (117)
7 1v89_A Hypothetical protein KI 98.7 4.7E-08 1.6E-12 66.2 6.6 98 60-174 8-112 (118)
8 1u5f_A SRC-associated adaptor 98.7 3.3E-08 1.1E-12 71.5 5.6 107 58-176 15-121 (148)
9 2dn6_A KIAA0640 protein; PH do 98.6 2.4E-08 8.1E-13 67.9 3.9 99 61-178 9-107 (115)
10 2yry_A Pleckstrin homology dom 98.6 1.2E-07 4.1E-12 65.3 6.9 98 61-174 23-120 (122)
11 1eaz_A Tandem PH domain contai 98.6 3.2E-08 1.1E-12 68.2 4.0 101 59-176 13-113 (125)
12 3rcp_A Pleckstrin homology dom 98.6 3.1E-07 1E-11 62.0 8.3 92 62-175 1-94 (103)
13 1upq_A PEPP1; PH domain, phosp 98.5 1.6E-07 5.4E-12 64.7 6.4 99 61-175 12-110 (123)
14 2cod_A Centaurin-delta 1; ARF 98.5 1.1E-07 3.9E-12 65.4 5.5 91 61-174 9-99 (115)
15 1fao_A Dual adaptor of phospho 98.5 1.6E-07 5.6E-12 65.4 6.1 95 59-173 17-111 (126)
16 3aj4_A Pleckstrin homology dom 98.5 1.5E-07 5.2E-12 64.3 5.6 94 61-171 6-108 (112)
17 2dkp_A Pleckstrin homology dom 98.5 3.1E-07 1E-11 63.7 6.8 98 61-174 22-119 (128)
18 1fgy_A GRP1; PH domain, signal 98.5 1.4E-07 4.7E-12 64.9 4.7 96 59-174 4-120 (127)
19 1x1g_A Pleckstrin 2; PH domain 98.5 3.4E-07 1.2E-11 63.8 6.6 101 59-174 17-124 (129)
20 2d9v_A Pleckstrin homology dom 98.5 3.4E-07 1.2E-11 65.8 6.5 98 61-172 9-112 (130)
21 1v5u_A SBF1, SET binding facto 98.4 6.8E-07 2.3E-11 60.8 7.2 100 60-174 8-111 (117)
22 1btn_A Beta-spectrin; signal t 98.4 7.9E-07 2.7E-11 59.6 7.0 98 62-171 1-105 (106)
23 2y7b_A Actin-binding protein a 98.4 3.1E-07 1.1E-11 64.3 4.8 96 61-171 6-125 (134)
24 1v5p_A Pleckstrin homology dom 98.4 5.3E-07 1.8E-11 66.4 5.9 103 57-175 12-121 (126)
25 2w2x_D 1-phosphatidylinositol- 98.4 7.3E-07 2.5E-11 64.2 6.2 98 56-171 8-116 (124)
26 2cof_A Protein KIAA1914; PH do 98.3 1.1E-06 3.7E-11 60.5 6.4 93 60-176 8-103 (107)
27 2d9x_A Oxysterol binding prote 98.3 8.1E-07 2.8E-11 62.2 5.1 94 60-175 8-105 (120)
28 2dhk_A TBC1 domain family memb 98.3 1.7E-06 5.9E-11 60.9 6.1 92 60-171 8-101 (119)
29 1v88_A Oxysterol binding prote 98.2 2.1E-06 7.2E-11 63.7 6.5 94 62-176 10-126 (130)
30 4h8s_A DCC-interacting protein 98.2 1.2E-06 4.2E-11 73.8 5.8 131 25-174 252-398 (407)
31 3cxb_B Pleckstrin homology dom 98.2 2.1E-06 7.2E-11 60.8 6.2 98 63-174 3-101 (112)
32 1u5e_A SRC-associated adaptor 98.2 1.6E-06 5.4E-11 68.7 5.8 102 60-173 106-207 (211)
33 3tca_A Amyloid beta A4 precurs 98.2 1E-06 3.5E-11 69.0 4.7 95 61-170 169-272 (291)
34 1unq_A RAC-alpha serine/threon 98.2 7E-07 2.4E-11 62.3 3.2 97 61-173 9-109 (125)
35 2dtc_A RAL guanine nucleotide 98.2 3.6E-06 1.2E-10 64.4 7.1 102 62-177 3-115 (126)
36 1wi1_A Calcium-dependent activ 98.2 3.1E-06 1.1E-10 65.4 6.8 105 61-183 9-119 (126)
37 2lul_A Tyrosine-protein kinase 98.2 6.7E-06 2.3E-10 62.2 8.0 106 61-176 16-123 (164)
38 2rsg_A Collagen type IV alpha- 98.1 5.9E-06 2E-10 55.2 6.3 86 63-171 4-91 (94)
39 2coc_A FYVE, rhogef and PH dom 98.1 6.5E-06 2.2E-10 60.3 6.6 96 60-174 8-106 (112)
40 1x1f_A Signal-transducing adap 98.1 6.8E-06 2.3E-10 62.9 6.8 94 62-175 20-114 (149)
41 2j59_M RHO-GTPase activating p 98.1 7.1E-06 2.4E-10 60.4 6.3 104 60-174 3-111 (168)
42 1wg7_A Dedicator of cytokinesi 98.0 4.3E-06 1.5E-10 60.1 4.4 100 61-174 19-124 (150)
43 1btk_A Bruton'S tyrosine kinas 98.0 4.9E-06 1.7E-10 63.7 5.0 105 62-176 5-134 (169)
44 2da0_A 130-kDa phosphatidylino 98.0 5.3E-06 1.8E-10 57.8 4.7 89 61-173 11-100 (114)
45 2rlo_A Centaurin-gamma 1; spli 98.0 1.3E-05 4.5E-10 56.9 5.9 97 62-171 6-121 (128)
46 1dro_A Beta-spectrin; cytoskel 98.0 6.3E-06 2.1E-10 58.2 4.1 101 61-172 9-117 (122)
47 2p0d_A RHO GTPase-activating p 98.0 7.6E-06 2.6E-10 59.4 4.5 98 61-172 13-122 (129)
48 1wjm_A Beta-spectrin III; PH d 97.9 1.1E-05 3.7E-10 56.5 4.0 102 61-174 9-117 (123)
49 2q13_A DCC-interacting protein 97.9 3E-05 1E-09 64.8 7.3 96 61-174 279-375 (385)
50 2r09_A Cytohesin-3; autoinhibi 97.8 2.1E-05 7.2E-10 66.3 5.3 93 61-173 214-327 (347)
51 3pp2_A RHO GTPase-activating p 97.8 2.8E-05 9.7E-10 56.0 5.1 100 61-171 9-120 (124)
52 3a8p_A T-lymphoma invasion and 97.8 1.8E-05 6.1E-10 65.0 4.4 106 60-174 11-124 (263)
53 1qqg_A IRS-1, insulin receptor 97.7 2.5E-05 8.6E-10 64.4 3.5 91 60-174 10-112 (264)
54 4a6h_A Phosphatidylinositol 4, 97.6 0.00011 3.7E-09 54.2 6.3 96 61-174 7-118 (120)
55 3tfm_A Myosin X; split PH doma 97.6 4.2E-05 1.4E-09 60.6 4.3 79 88-174 77-155 (228)
56 3lju_X ARF-GAP with dual PH do 97.6 6.4E-05 2.2E-09 64.7 5.8 97 62-173 271-371 (386)
57 2rov_A RHO-associated protein 97.5 4.9E-05 1.7E-09 55.8 3.2 85 89-173 19-114 (117)
58 3lju_X ARF-GAP with dual PH do 97.3 6.6E-05 2.3E-09 64.6 2.2 113 40-171 119-243 (386)
59 4gmv_A RAS-associated and plec 96.8 0.0013 4.6E-08 55.9 4.8 96 61-171 159-263 (281)
60 1dyn_A Dynamin; signal transdu 96.4 0.0033 1.1E-07 49.1 4.4 80 87-172 26-116 (125)
61 3a8n_A TIAM-1, T-lymphoma inva 96.4 0.0023 7.8E-08 54.4 3.7 107 60-174 11-124 (279)
62 3hk0_A Growth factor receptor- 96.1 0.01 3.5E-07 49.7 6.3 96 60-170 132-236 (256)
63 4ejn_A RAC-alpha serine/threon 93.4 0.1 3.5E-06 42.9 5.1 94 63-172 9-106 (446)
64 2ys3_A UNC-112-related protein 92.6 0.18 6.3E-06 39.7 5.3 81 87-174 25-112 (137)
65 2fjl_A 1-phosphatidylinositol- 91.4 0.79 2.7E-05 36.4 7.7 33 63-109 4-36 (150)
66 2yy0_A C-MYC-binding protein; 78.1 1.6 5.6E-05 29.3 2.8 32 20-51 19-50 (53)
67 2yy0_A C-MYC-binding protein; 75.8 1.7 5.7E-05 29.2 2.4 31 25-55 17-47 (53)
68 1go4_E MAD1 (mitotic arrest de 75.4 1.7 5.7E-05 33.0 2.5 34 19-52 11-44 (100)
69 2coa_A Protein kinase C, D2 ty 74.8 5.4 0.00018 31.1 5.4 60 89-148 23-83 (125)
70 2aze_B Transcription factor E2 67.6 3.6 0.00012 30.6 2.8 42 27-68 6-51 (106)
71 3tfm_A Myosin X; split PH doma 65.8 6.6 0.00023 30.7 4.1 31 62-106 23-53 (228)
72 2fcw_A Alpha-2-macroglobulin r 62.8 7 0.00024 30.2 3.7 35 23-57 20-57 (109)
73 4etp_A Kinesin-like protein KA 59.4 8.1 0.00028 33.8 3.9 40 20-59 3-42 (403)
74 1l8d_A DNA double-strand break 56.9 11 0.00037 26.5 3.6 43 21-65 65-107 (112)
75 1w1g_A HPDK1, 3-phosphoinositi 56.5 25 0.00085 27.9 6.0 87 60-173 52-138 (151)
76 2d9z_A Protein kinase C, NU ty 56.4 21 0.00072 28.0 5.5 60 89-148 23-83 (129)
77 1zme_C Proline utilization tra 52.1 11 0.00037 24.0 2.7 32 20-51 37-68 (70)
78 3viq_B Mating-type switching p 51.5 8.8 0.0003 28.4 2.4 27 28-54 2-28 (85)
79 1dip_A Delta-sleep-inducing pe 49.0 4.4 0.00015 30.1 0.4 31 25-59 13-43 (78)
80 1g6u_A Domain swapped dimer; d 45.9 17 0.00057 24.7 2.9 31 23-53 16-46 (48)
81 3kqg_A Langerin, C-type lectin 44.9 12 0.0004 27.2 2.2 32 27-58 6-40 (182)
82 2qhk_A Methyl-accepting chemot 44.2 23 0.00078 25.9 3.7 44 25-70 6-71 (174)
83 2j5u_A MREC protein; bacterial 42.2 16 0.00055 29.9 2.9 65 26-100 25-93 (255)
84 1wt6_A Myotonin-protein kinase 41.1 25 0.00085 26.0 3.4 45 20-64 31-75 (81)
85 1l8d_A DNA double-strand break 40.7 29 0.00098 24.3 3.6 38 23-60 6-43 (112)
86 1t2k_D Cyclic-AMP-dependent tr 40.1 17 0.00058 23.9 2.2 32 25-56 27-58 (61)
87 1fmh_A General control protein 38.9 17 0.00057 23.1 1.9 25 28-52 2-29 (33)
88 1nkp_B MAX protein, MYC proto- 38.7 19 0.00066 24.6 2.4 23 28-50 55-77 (83)
89 1ci6_A Transcription factor AT 38.3 33 0.0011 23.0 3.5 37 22-58 25-61 (63)
90 1mai_A Phospholipase C delta-1 37.4 27 0.00092 25.2 3.1 78 92-171 30-118 (131)
91 2lw1_A ABC transporter ATP-bin 37.2 32 0.0011 24.0 3.4 31 21-51 13-46 (89)
92 3i00_A HIP-I, huntingtin-inter 36.8 23 0.00078 27.0 2.8 33 21-53 16-59 (120)
93 3q8t_A Beclin-1; autophagy, AT 36.7 22 0.00076 25.8 2.6 28 27-54 4-31 (96)
94 2wt7_A Proto-oncogene protein 36.3 35 0.0012 22.7 3.3 37 22-58 25-61 (63)
95 1v5m_A SH2 and PH domain-conta 36.1 36 0.0012 27.1 3.9 81 88-170 40-126 (136)
96 2p01_A Alpha-2-macroglobulin r 35.9 29 0.00099 31.0 3.7 36 23-58 234-272 (323)
97 2rjz_A PILO protein; structura 35.8 26 0.00089 26.6 3.0 48 25-72 13-67 (147)
98 2it9_A Hypothetical protein; s 35.8 12 0.00041 29.5 1.1 64 20-97 30-93 (127)
99 3he4_B Synzip5; heterodimeric 34.9 26 0.00087 23.6 2.4 25 29-53 5-29 (46)
100 3efg_A Protein SLYX homolog; x 34.1 22 0.00074 25.2 2.1 36 29-64 30-65 (78)
101 3gpv_A Transcriptional regulat 31.7 22 0.00076 26.5 2.0 36 23-58 98-133 (148)
102 2dgc_A Protein (GCN4); basic d 31.3 22 0.00077 24.1 1.8 29 22-50 32-60 (63)
103 1x8y_A Lamin A/C; structural p 30.3 27 0.00092 24.7 2.1 16 27-42 3-18 (86)
104 2p4v_A Transcription elongatio 29.8 46 0.0016 25.5 3.5 24 39-62 51-74 (158)
105 2wuj_A Septum site-determining 29.6 19 0.00065 23.9 1.1 28 23-50 30-57 (57)
106 2jee_A YIIU; FTSZ, septum, coi 29.2 53 0.0018 24.0 3.5 17 42-58 56-72 (81)
107 1q08_A Zn(II)-responsive regul 29.2 50 0.0017 22.1 3.2 32 29-60 41-72 (99)
108 1deb_A APC protein, adenomatou 28.9 65 0.0022 22.4 3.7 40 21-60 11-50 (54)
109 4dzo_A Mitotic spindle assembl 28.8 26 0.00088 26.6 1.9 43 26-68 3-47 (123)
110 1t2k_D Cyclic-AMP-dependent tr 28.3 59 0.002 21.3 3.4 32 19-50 28-59 (61)
111 2d9w_A Docking protein 2; PH d 28.0 89 0.003 24.4 4.9 78 89-170 29-117 (127)
112 1r8d_A Transcription activator 27.7 30 0.001 24.1 2.0 26 32-57 80-105 (109)
113 3gp4_A Transcriptional regulat 27.2 42 0.0014 25.0 2.8 36 22-57 83-118 (142)
114 3hnw_A Uncharacterized protein 27.0 35 0.0012 26.2 2.3 25 27-51 89-113 (138)
115 2j3t_D Trafficking protein par 25.3 33 0.0011 28.6 2.1 19 139-157 3-22 (219)
116 3zwh_Q Myosin-9; Ca-binding pr 24.8 22 0.00076 23.6 0.8 32 32-63 4-35 (45)
117 1grj_A GREA protein; transcrip 24.3 58 0.002 24.8 3.1 24 39-62 51-74 (158)
118 3pbf_A Pulmonary surfactant-as 24.3 26 0.00088 24.4 1.1 83 30-115 5-96 (148)
119 2aze_B Transcription factor E2 24.1 64 0.0022 23.8 3.2 38 18-55 4-41 (106)
120 4dyl_A Tyrosine-protein kinase 24.0 97 0.0033 26.4 4.8 21 39-59 371-391 (406)
121 3cve_A Homer protein homolog 1 23.9 65 0.0022 23.0 3.1 32 27-58 21-52 (72)
122 3htk_A Structural maintenance 23.9 63 0.0022 20.5 2.8 33 22-54 14-46 (60)
123 3vxj_A DYP; DYE-decolorizing p 23.7 13 0.00043 33.1 -0.8 16 89-104 414-429 (442)
124 2er8_A Regulatory protein Leu3 23.4 30 0.001 22.1 1.2 19 34-52 49-67 (72)
125 3mpx_A FYVE, rhogef and PH dom 23.3 1.4E+02 0.0049 24.5 5.6 77 90-171 258-334 (434)
126 2nvn_A Hypothetical protein; s 23.1 13 0.00044 29.1 -0.7 68 20-101 32-99 (122)
127 3cvf_A Homer-3, homer protein 23.0 68 0.0023 23.2 3.1 31 28-58 28-58 (79)
128 2f1m_A Acriflavine resistance 22.9 78 0.0027 24.3 3.7 51 25-78 96-150 (277)
129 4ani_A Protein GRPE; chaperone 22.5 55 0.0019 27.0 2.9 35 20-54 59-93 (213)
130 2zdi_C Prefoldin subunit alpha 22.2 77 0.0026 23.5 3.4 42 19-60 97-138 (151)
131 3u06_A Protein claret segregat 22.1 75 0.0026 27.9 3.8 33 26-58 9-41 (412)
132 2ve7_A Kinetochore protein HEC 21.9 69 0.0024 27.0 3.5 23 19-41 184-206 (315)
133 1go4_E MAD1 (mitotic arrest de 21.2 97 0.0033 23.3 3.8 42 24-65 9-50 (100)
134 1jcd_A Major outer membrane li 21.0 60 0.002 21.9 2.3 32 21-52 19-50 (52)
135 1wle_A Seryl-tRNA synthetase; 20.6 56 0.0019 29.6 2.8 31 21-51 117-147 (501)
136 1r8e_A Multidrug-efflux transp 20.2 88 0.003 24.0 3.5 35 23-57 82-116 (278)
137 1r8d_A Transcription activator 20.2 77 0.0026 22.0 2.9 23 26-48 81-103 (109)
No 1
>1pls_A Pleckstrin homology domain; phosphorylation; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.94 E-value=2.3e-09 Score=73.57 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=84.1
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
-.+|||+-+.. -..-|=.||+||.|.+++||--..|-.|.+.+-|.++..+-.. .+++...|
T Consensus 6 ~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~----~~~~~~~~ 67 (113)
T 1pls_A 6 IREGYLVKKGS--------------VFNTWKPMWVVLLEDGIEFYKKKSDNSPKGMIPLKGSTLTSPC----QDFGKRMF 67 (113)
T ss_dssp SEEEEEEEESS--------------SSSCCEEEEEEEETTEEEEESSTTCSSCSEEEESSSCCEESSC----CSSCCSSS
T ss_pred cEEEEEEEeCC--------------CCCCceEEEEEEECCEEEEEeCCCCCCcceEEEcCCCEEEEec----CCCCCCcc
Confidence 36899998753 2457999999999999999998889999999999988766422 23445678
Q ss_pred EEEEEeecceeeeecccceeehhhHHHHhhccccccCCCCCCCC
Q 028920 141 CFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLDYEPSTPNG 184 (202)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~~~~~~~ng 184 (202)
+|-|.|..|=.|..+..++-+.+.|+.+|+.=+........|.+
T Consensus 68 ~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~~~~~~~~~~~~~ 111 (113)
T 1pls_A 68 VFKITTTKQQDHFFQAAFLEERDAWVRDINKAIKCIEGLEHHHH 111 (113)
T ss_dssp EEEEEETTTEEEEEECSSHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHhccchhhhhcc
Confidence 99999988877888888899999999999976665555555544
No 2
>1wgq_A FYVE, rhogef and PH domain containing 6; ethanol decreased 4; pleckstrin homoloy domain, signal transduction, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.89 E-value=3.7e-09 Score=72.37 Aligned_cols=94 Identities=18% Similarity=0.305 Sum_probs=75.6
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceE
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQ 139 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~ 139 (202)
..++|||+-+.. -..-|-.||+||.|.+++||--..|-.|.+++-|.++.-+-..+. ....
T Consensus 8 ~~~~G~L~K~~~--------------~~~~Wk~RwfvL~~~~L~yyk~~~~~~~~~~i~L~~~~~~~~~~~-----~~~~ 68 (109)
T 1wgq_A 8 STMSGYLYRSKG--------------SKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFTVTLVKDE-----NSES 68 (109)
T ss_dssp CSCEEEEEEESS--------------TTSCCEEEEEEEETTEEEEESCTTCSSCSEEEECSSEEEEECCCS-----SCSS
T ss_pred CeEEEEEEeCCC--------------CCCCceeEEEEEeCCEEEEECCCCcCccCceEECCCCEEEECCCC-----CCCC
Confidence 357999997631 146799999999999999999999999999999988776544332 2235
Q ss_pred EEEEEEeecceeeeecccceeehhhHHHHhhcc
Q 028920 140 YCFYILTRHGLRIECSSISKIQVYSWLSALQTD 172 (202)
Q Consensus 140 yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d 172 (202)
++|-|.|.++-.|..+..++-+.+.|+.||+.=
T Consensus 69 ~~F~i~~~~~~~~~~~a~s~~e~~~Wi~al~~a 101 (109)
T 1wgq_A 69 KVFQLLHKGMVFYVFKADDAHSTQRWIDAFQEG 101 (109)
T ss_dssp SEEEEEETTEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred cEEEEEeCCCeEEEEECCCHHHHHHHHHHHHHH
Confidence 899999887766888888899999999999853
No 3
>2i5f_A Pleckstrin; PH domain, protein-inositol phosphate complex, lipid binding protein; HET: 5IP; 1.35A {Homo sapiens} SCOP: b.55.1.1 PDB: 2i5c_A* 1zm0_A
Probab=98.84 E-value=2.1e-09 Score=72.52 Aligned_cols=100 Identities=18% Similarity=0.243 Sum_probs=74.6
Q ss_pred hhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecc--eeEeeeeecCCCCCCcceeeh--hhhccCCCCccc
Q 028920 58 RSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS--CIFFYLLSTDLSPQDSTVLSD--VVEVASLPSITR 133 (202)
Q Consensus 58 RsarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~--ciffyL~sTDLsPQdStllsD--IVEVg~lP~f~r 133 (202)
+..-.+|||+-+... ...|=.||+||.|. +++||-...|-.|.+++-|.+ |+++...|.-..
T Consensus 5 ~~~~~~G~L~K~g~~--------------~~~Wk~R~fvL~~~~~~L~yyk~~~~~~~~g~i~L~~~~v~~~~~~~~~~~ 70 (109)
T 2i5f_A 5 GVIIKQGCLLKQGHR--------------RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRK 70 (109)
T ss_dssp CCEEEEEEEEEECTT--------------TCCEEEEEEEEETTTTEEEEECTTSCSSCSEEEECTTCEEEEECC------
T ss_pred CceeEEEEEEEcCCC--------------CCCceEEEEEEeCCCcEEEEECCCCCCCccEEEECCCCEEEEccCCccccc
Confidence 345578999987431 45699999999986 999998888889999999988 556665553211
Q ss_pred CCCceEEEEEEEeecceeeeecccceeehhhHHHHhhccc
Q 028920 134 ENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDC 173 (202)
Q Consensus 134 Edge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~ 173 (202)
....++|.|.|..+-.|..+..++-+.+.|+.||+.=|
T Consensus 71 --~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~ai~~~~ 108 (109)
T 2i5f_A 71 --SEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMAS 108 (109)
T ss_dssp ----CCSEEEEECTTCCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred --CCCceEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHHh
Confidence 12568999999877668877888889999999998644
No 4
>1u5d_A SKAP55, SRC kinase-associated phosphoprotein of 55 kDa; PH domain, signaling protein; 1.70A {Homo sapiens} SCOP: b.55.1.1
Probab=98.81 E-value=5.2e-09 Score=69.73 Aligned_cols=100 Identities=16% Similarity=0.370 Sum_probs=78.3
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
-.+|||+-+.+-..+. ...|=.||+||.|.+++||--..|-.|.+++-|.++. |-..|.. .++....|
T Consensus 4 ~~~G~L~K~~~~~~~~----------~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~~-~~~~~~~~ 71 (108)
T 1u5d_A 4 IKQGYLEKKSKDHSFF----------GSEWQKRWCVVSRGLFYYYANEKSKQPKGTFLIKGYS-VRMAPHL-RRDSKKES 71 (108)
T ss_dssp EEEEEEEEEEECSSSS----------CEEEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCE-EEECGGG-CSSGGGGG
T ss_pred cEEEEEEEcCCCCCcc----------ccCceeeEEEEeCCEEEEecCCCCCCCCEEEEecceE-EEeCCcc-ccccCCcc
Confidence 3589999997532211 2579999999999999999999999999999998877 3333322 24445679
Q ss_pred EEEEEeecceeeeecccceeehhhHHHHhhcc
Q 028920 141 CFYILTRHGLRIECSSISKIQVYSWLSALQTD 172 (202)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdsWL~al~~d 172 (202)
+|-|.|..|=.|..+..+.-+.+.|+.||+.=
T Consensus 72 ~F~i~~~~~r~~~l~a~s~~e~~~Wi~ai~~~ 103 (108)
T 1u5d_A 72 CFELTSQDRRTYEFTATSPAEARDWVDQISFL 103 (108)
T ss_dssp EEEEECSSSCCEEEECSSHHHHHHHHHHHHHH
T ss_pred eEEEEcCCCcEEEEECCCHHHHHHHHHHHHHH
Confidence 99999988777777788888999999999853
No 5
>1x05_A Pleckstrin; PH domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.55.1.1 PDB: 1xx0_A
Probab=98.73 E-value=2.8e-08 Score=69.53 Aligned_cols=103 Identities=17% Similarity=0.230 Sum_probs=78.7
Q ss_pred hhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecc--eeEeeeeecCCCCCCcceeehh--hhccCCCCccc
Q 028920 58 RSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS--CIFFYLLSTDLSPQDSTVLSDV--VEVASLPSITR 133 (202)
Q Consensus 58 RsarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~--ciffyL~sTDLsPQdStllsDI--VEVg~lP~f~r 133 (202)
...-.+|||+-+... +..|=.||+||.|. +++||-...|-.|.+.+-|.++ +++...|.-..
T Consensus 16 ~~~~~~G~L~K~g~~--------------~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~~~~~~ 81 (129)
T 1x05_A 16 GVIIKQGCLLKQGHR--------------RKNWKVRKFILREDPAYLHYYDPAGAEDPLGAIHLRGCVVTSVESNSNGRK 81 (129)
T ss_dssp SEEEEEEEEEECCSS--------------CCCCEEEEEEEEETTTEEEEECSSCCSSCSEEEECTTCEEEECCCCCCSSS
T ss_pred CCceEEEEEEecCCC--------------CCCCeeEEEEEeCCCCEEEEECCCCCCcceeEEEccCCEEEEccCCccccc
Confidence 344579999987431 45699999999985 9999988888999999999874 34544443211
Q ss_pred CCCceEEEEEEEeecceeeeecccceeehhhHHHHhhcccccc
Q 028920 134 ENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLD 176 (202)
Q Consensus 134 Edge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~ 176 (202)
....++|.|.|..+-.|..+..++-+.+.|+.||+.=++..
T Consensus 82 --~~~~~~F~i~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~~~ 122 (129)
T 1x05_A 82 --SEEENLFEIITADEVHYFLQAATPKERTEWIKAIQMASRTG 122 (129)
T ss_dssp --CSSCSEEEEECTTCCCCEEECSSHHHHHHHHHHHHHHHTCC
T ss_pred --cCCCeEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHcc
Confidence 23578999999876558888888899999999999877643
No 6
>2d9y_A Pleckstrin homology domain-containing protein family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=6.4e-08 Score=65.95 Aligned_cols=99 Identities=20% Similarity=0.299 Sum_probs=76.7
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhh--hccCCCCcccCCCce
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVV--EVASLPSITRENGEM 138 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIV--EVg~lP~f~rEdge~ 138 (202)
-.+|||+-+.. .-..-|-.||+||.|.+++||--..|-.|.+.+-|.++. ++..- +....
T Consensus 12 ~~~G~L~K~~~-------------~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~-----~~~~~ 73 (117)
T 2d9y_A 12 TKAGWLFKQAS-------------SGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPS-----DNISR 73 (117)
T ss_dssp CEEEEEEEECT-------------TSSSCEEEEEEEEETTEEEEESSTTCCSCCEEEECSSCEEEECCTT-----TTCCC
T ss_pred eEEEEEEEeCC-------------CCCCCceEEEEEECCCEEEEECCCCCCCcCCEEEeCCeEEEEcCcc-----ccCCC
Confidence 47899998851 124579999999999999999988899999999998853 33221 22345
Q ss_pred EEEEEEEeecceeeeecccceeehhhHHHHhhccccccC
Q 028920 139 QYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLDY 177 (202)
Q Consensus 139 ~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~~ 177 (202)
.|+|.|.+..+=.|..+..++-+.+.|+.||+.=++...
T Consensus 74 ~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~~~ 112 (117)
T 2d9y_A 74 KHTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQS 112 (117)
T ss_dssp SSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHTTCCTT
T ss_pred ccEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHhhcc
Confidence 689999877666777777888899999999998776544
No 7
>1v89_A Hypothetical protein KIAA0053; pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.67 E-value=4.7e-08 Score=66.22 Aligned_cols=98 Identities=17% Similarity=0.283 Sum_probs=74.2
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceE
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQ 139 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~ 139 (202)
.-.+|||+.+.. -..-|=.||+||.|.+++||--..|-.|.+.+-|.++.-+...|. ......
T Consensus 8 ~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~v~~~~~~---~~~~~~ 70 (118)
T 1v89_A 8 PIKMGWLKKQRS--------------IVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATN---PEEAGK 70 (118)
T ss_dssp EEEEEEEEEECS--------------SSSCEEEEEEEEETTEEEEESSSSCCSCSEEECSTTEEEEEECCC---SSCCCC
T ss_pred CcEEEEEEecCC--------------CCCCccEEEEEEECCEEEEEeCCCCCCceEEEECCCCEEEEcCcC---cccCCc
Confidence 346899999842 245799999999999999999999999999999887542221111 122347
Q ss_pred EEEEEEee-------cceeeeecccceeehhhHHHHhhcccc
Q 028920 140 YCFYILTR-------HGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 140 yaFyIlTr-------hGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
|+|-|.|. .+=.|.....++-+.+.|+.||+.=+.
T Consensus 71 ~~f~i~~~~~~~~~~~~~~~~l~a~s~~e~~~Wi~al~~~~~ 112 (118)
T 1v89_A 71 FVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAG 112 (118)
T ss_dssp CEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred ceEEEECCccccccCCCcEEEEECCCHHHHHHHHHHHHHHHc
Confidence 89999984 555677777788899999999987655
No 8
>1u5f_A SRC-associated adaptor protein; PH domain of SKAP-HOM, artefactual dimerization induced by V derived sequence, signaling protein; 1.90A {Mus musculus} SCOP: b.55.1.1 PDB: 1u5g_A
Probab=98.65 E-value=3.3e-08 Score=71.54 Aligned_cols=107 Identities=17% Similarity=0.244 Sum_probs=80.6
Q ss_pred hhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCc
Q 028920 58 RSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGE 137 (202)
Q Consensus 58 RsarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge 137 (202)
+..-.+|||+-+..-... =+.-|-.||+||.|.+++||--..|-.|.+.+-|.++. |-..|+. .+++.
T Consensus 15 ~~~~~~G~L~K~g~~~~~----------~~k~WkkR~fvL~~~~L~yyk~~~~~~~~g~i~L~~~~-v~~~~~~-~~~~~ 82 (148)
T 1u5f_A 15 PFVIKAGYLEKRRKDHSF----------LGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYD-VRMNNTL-RKDGK 82 (148)
T ss_dssp SSEEEEEEEEEECCCSSC----------SSCSEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCE-EEECTTS-CSSTT
T ss_pred CCccEEEEEEEeCCCCCC----------cCCCceeEEEEEECCEEEEEcCCCCcccceEEEcCCcE-EEECCCc-ccCCC
Confidence 455679999998643211 13569999999999999999888888999999998774 4444433 23444
Q ss_pred eEEEEEEEeecceeeeecccceeehhhHHHHhhcccccc
Q 028920 138 MQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLD 176 (202)
Q Consensus 138 ~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~ 176 (202)
..++|.|.|..|=.|..+..++-+.+.|+.||+.=++..
T Consensus 83 ~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~i~~~ 121 (148)
T 1u5f_A 83 KDCCFEICAPDKRIYQFTAASPKDAEEWVQQLKFILQDL 121 (148)
T ss_dssp GGGEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHCC--
T ss_pred CccEEEEECCCCcEEEEECCCHHHHHHHHHHHHHHHHHh
Confidence 559999999777677777778889999999999766543
No 9
>2dn6_A KIAA0640 protein; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.62 E-value=2.4e-08 Score=67.92 Aligned_cols=99 Identities=20% Similarity=0.323 Sum_probs=76.8
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
-.+|||+-|.. -..-|=.||+||.|.+++||--..|-.|.+.+-|.++..|-..|.. ....+
T Consensus 9 ~~~G~L~K~~~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~----~~~~~ 70 (115)
T 2dn6_A 9 LKQGYMMKKGH--------------RRKNWTERWFVLKPNIISYYVSEDLKDKKGDILLDENCCVESLPDK----DGKKC 70 (115)
T ss_dssp SEEEEEEEECT--------------TSSCEEEEEEEECSSCEEEESSTTCSSEEEEECCCTTCEEEEECCC----TTCCS
T ss_pred eEEEEEEecCC--------------CCCCcEEeEEEEECCEEEEeCCCCCcccCcEEEecCcEEEEECCCC----CCCee
Confidence 46899998854 1357999999999999999998889999999999987666655532 23358
Q ss_pred EEEEEeecceeeeecccceeehhhHHHHhhccccccCC
Q 028920 141 CFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLDYE 178 (202)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~~~ 178 (202)
+|.|.|.+. .|.....++-..+.|+.+|+.=++....
T Consensus 71 ~F~i~~~~r-~~~l~a~s~~e~~~Wi~ai~~~~~~~~~ 107 (115)
T 2dn6_A 71 LFLVKCFDK-TFEISASDKKKKQEWIQAIHSTIHLLKL 107 (115)
T ss_dssp EEEEECSSC-EEEEECSSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCC-EEEEEcCCHHHHHHHHHHHHHHHHHHhc
Confidence 999988654 4666667778899999999977665433
No 10
>2yry_A Pleckstrin homology domain-containing family A member 6; PH domain, PEPP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.60 E-value=1.2e-07 Score=65.28 Aligned_cols=98 Identities=21% Similarity=0.324 Sum_probs=74.0
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
-.+|||+-+.. .-..-|-.||+||.|.+++||--..|-.|.+.+-|.++. |-.+.. .+.....|
T Consensus 23 ~~~G~L~K~~~-------------~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~~--~~~~~~~~ 86 (122)
T 2yry_A 23 TKAGWLFKQAS-------------SGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFR-VAAVQP--SDNISRKH 86 (122)
T ss_dssp EEEEEEEEECC-------------SSSCCEEEEEEEEETTEEEEESSTTCCSCCEEEESTTCC-CEECCT--TCSCSSSS
T ss_pred cEEEEEEEECC-------------CCCCCcEEEEEEEeCCEEEEECCCCCCCcccEEEcCCCE-EEEcCc--cccCCccc
Confidence 46899998841 013579999999999999999988999999999998864 222210 11223468
Q ss_pred EEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 141 CFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
+|-|.+..+=.|..+..++-+.+.|+.||+.=++
T Consensus 87 ~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 120 (122)
T 2yry_A 87 TFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAAR 120 (122)
T ss_dssp EEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHC
T ss_pred EEEEecCCCcEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9999877777777777888899999999986443
No 11
>1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1
Probab=98.60 E-value=3.2e-08 Score=68.18 Aligned_cols=101 Identities=17% Similarity=0.215 Sum_probs=77.6
Q ss_pred hhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCce
Q 028920 59 SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEM 138 (202)
Q Consensus 59 sarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~ 138 (202)
..-.+|||+.+.. -...|-.||+||.|.+++||--..|-.|.+.+-|.++..|...+.- +....
T Consensus 13 ~~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~~~--~~~~~ 76 (125)
T 1eaz_A 13 AVIKAGYCVKQGA--------------VMKNWKRRYFQLDENTIGYFKSELEKEPLRVIPLKEVHKVQECKQS--DIMMR 76 (125)
T ss_dssp CCSEEEEEEEECT--------------TTCCEEEEEEEECSSEEEEESSTTCSSCSEEEEGGGCCEEEECTTH--HHHTC
T ss_pred CccEEEEEEEeCC--------------CCCCcceEEEEEeCCEEEEEcCCCCCcceeEEEcccceEEeecccc--ccCCc
Confidence 3457899998743 2357999999999999999999999999999999998766543321 11234
Q ss_pred EEEEEEEeecceeeeecccceeehhhHHHHhhcccccc
Q 028920 139 QYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLD 176 (202)
Q Consensus 139 ~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~ 176 (202)
.++|-|.|.+ =.|.....++-..+.|+.+|+.=+...
T Consensus 77 ~~~F~i~~~~-r~~~l~a~s~~e~~~W~~al~~~i~~~ 113 (125)
T 1eaz_A 77 DNLFEIVTTS-RTFYVQADSPEEMHSWIKAVSGAIVAQ 113 (125)
T ss_dssp SSEEEEECSS-CEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCC-cEEEEEcCCHHHHHHHHHHHHHHHHhc
Confidence 6799998854 457777778889999999998765543
No 12
>3rcp_A Pleckstrin homology domain-containing family A ME; FAPP1, PH domain, lipid-binding, membrane, membrane protein; 1.90A {Homo sapiens} PDB: 2kcj_A
Probab=98.58 E-value=3.1e-07 Score=61.98 Aligned_cols=92 Identities=18% Similarity=0.349 Sum_probs=68.9
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCC--CCCCcceeehhhhccCCCCcccCCCceE
Q 028920 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDL--SPQDSTVLSDVVEVASLPSITRENGEMQ 139 (202)
Q Consensus 62 lSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDL--sPQdStllsDIVEVg~lP~f~rEdge~~ 139 (202)
+.|||+-++.. +..|=.||+||.|.+++||--..|. .|.+++-|++ +.|...|. ..
T Consensus 1 ~eG~L~K~g~~--------------~k~Wk~R~fvL~~~~L~Yy~~~~~~~~~~~g~i~L~~-~~v~~~~~-------~~ 58 (103)
T 3rcp_A 1 MEGVLYKWTNY--------------LTGWQPRWFVLDNGILSYYDSQDDVCKGSKGSIKMAV-CEIKVHSA-------DN 58 (103)
T ss_dssp CEEEEEEECCT--------------TTCEEEEEEEEETTEEEEESSCC---CCCSCEEEGGG-CEEECCTT-------CS
T ss_pred CceEEEEccCC--------------CCCeeceEEEEECCEEEEEecCCcccCCcccEEEeee-eEEEEcCC-------CC
Confidence 47999988642 3479999999999999999988875 4999998863 44443332 24
Q ss_pred EEEEEEeecceeeeecccceeehhhHHHHhhccccc
Q 028920 140 YCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKL 175 (202)
Q Consensus 140 yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~ 175 (202)
++|.|.|..+=.|.....++-..+.|+.||+.=...
T Consensus 59 ~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 94 (103)
T 3rcp_A 59 TRMELIIPGEQHFYMKAVNAAERQRWLVALGSSKAS 94 (103)
T ss_dssp SEEEEEETTTEEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred ceEEEEeCCCCEEEEECCCHHHHHHHHHHHHHHHHh
Confidence 589998865667777778888899999999964433
No 13
>1upq_A PEPP1; PH domain, phosphoinositide binding, signal transduction; 1.48A {Homo sapiens} SCOP: b.55.1.1 PDB: 1upr_A*
Probab=98.55 E-value=1.6e-07 Score=64.72 Aligned_cols=99 Identities=19% Similarity=0.291 Sum_probs=74.6
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
-.+|||+.+.. . -+.-|-.||+||.|.+++||--..|-.|.+.+-|.++. |-..+.. ......|
T Consensus 12 ~~~G~L~K~~~------~-------~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~-v~~~~~~--~~~~~~~ 75 (123)
T 1upq_A 12 HIRGWLHKQDS------S-------GLRLWKRRWFVLSGHCLFYYKDSREESVLGSVLLPSYN-IRPDGPG--APRGRRF 75 (123)
T ss_dssp EEEEEEEEECS------S-------SSCCEEEEEEEEETTEEEEESSTTCCSCCEEEEGGGCE-EEECCSS--CTTSSSS
T ss_pred eEEEEEEeeCC------C-------CCCCceeEEEEEeCCEEEEECCCCCcccceEEECCCCE-EEECCCC--ccCCCcE
Confidence 47899998852 0 12469999999999999999988888999998887642 3333221 2234578
Q ss_pred EEEEEeecceeeeecccceeehhhHHHHhhccccc
Q 028920 141 CFYILTRHGLRIECSSISKIQVYSWLSALQTDCKL 175 (202)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~ 175 (202)
+|.|.|..+=.|.....++-+.+.|+.||+.=+..
T Consensus 76 ~f~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~~ 110 (123)
T 1upq_A 76 TFTAEHPGMRTYVLAADTLEDLRGWLRALGRASRA 110 (123)
T ss_dssp EEEEECTTSCCEEEECSSHHHHHHHHHHHHHHHC-
T ss_pred EEEEECCCCeEEEEECCCHHHHHHHHHHHHHHHhc
Confidence 99998877667777778888999999999976654
No 14
>2cod_A Centaurin-delta 1; ARF GAP and RHO GAP with ankyrin repeat and PH domains (ARAP) 2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.54 E-value=1.1e-07 Score=65.45 Aligned_cols=91 Identities=18% Similarity=0.194 Sum_probs=72.6
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
-.+|||+-+... -..-|=.||+||.|.+++||--..|-.|.+.+-|.++..|-..+ .+
T Consensus 9 ~~~G~L~K~~~~-------------~~~~WkkR~fvL~~~~L~yy~~~~~~~~~g~i~l~~~~~v~~~~---------~~ 66 (115)
T 2cod_A 9 VKSGWLDKLSPQ-------------GKRMFQKRWVKFDGLSISYYNNEKEMYSKGIIPLSAISTVRVQG---------DN 66 (115)
T ss_dssp CEEEEEEECCSS-------------SSSCCEEEEEEECSSEEEEEESSCCSSCCCEEETTTEEEEEEET---------TT
T ss_pred cEEEEEEEcCCC-------------CCCCCceEEEEEECCEEEEEcCCCCcccCCEEECCcceEEEeCC---------CC
Confidence 468999987531 13469999999999999999999999999999999987665443 47
Q ss_pred EEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 141 CFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
+|.|.|. +=.|.....++-+.+.|+.+|+.=+.
T Consensus 67 ~F~i~~~-~r~~~l~a~s~~e~~~Wi~~l~~~~~ 99 (115)
T 2cod_A 67 KFEVVTT-QRTFVFRVEKEEERNDWISILLNALK 99 (115)
T ss_dssp EEEEEES-SCCEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EEEEEeC-CcEEEEECCCHHHHHHHHHHHHHHHH
Confidence 8999854 55566667777889999999997553
No 15
>1fao_A Dual adaptor of phosphotyrosine and 3- phosphoinositides; pleckstrin, inositol tetrakisphosphate signal transduction protein, adaptor protein; HET: 4IP; 1.80A {Homo sapiens} SCOP: b.55.1.1 PDB: 1fb8_A
Probab=98.53 E-value=1.6e-07 Score=65.37 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=74.5
Q ss_pred hhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCce
Q 028920 59 SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEM 138 (202)
Q Consensus 59 sarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~ 138 (202)
..-.+|||+-+.. -...|=.||+||.|.+++||--..|-.|.+.+-|.++..|..-+ +..-
T Consensus 17 ~~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~-----~~~~ 77 (126)
T 1fao_A 17 LGTKEGYLTKQGG--------------LVKTWKTRWFTLHRNELKYFKDQMSPEPIRILDLTECSAVQFDY-----SQER 77 (126)
T ss_dssp TTCEEEEEEEECS--------------SSCCEEEEEEEEETTEEEEESSTTCSSCSEEEEGGGCCEEEEEC-----SSSS
T ss_pred CccEEEEEEEcCC--------------CCCCcccEEEEEECCEEEEeCCCCCCCceeEEEccceEEEEecc-----cCCC
Confidence 4568999998852 24569999999999999999988899999999999887554322 2344
Q ss_pred EEEEEEEeecceeeeecccceeehhhHHHHhhccc
Q 028920 139 QYCFYILTRHGLRIECSSISKIQVYSWLSALQTDC 173 (202)
Q Consensus 139 ~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~ 173 (202)
.++|.|.|. +=.|.....++-+.+.|+.||+.=+
T Consensus 78 ~~~F~i~~~-~r~~~l~a~s~~e~~~Wi~al~~~i 111 (126)
T 1fao_A 78 VNCFCLVFP-FRTFYLCAKTGVEADEWIKILRWKL 111 (126)
T ss_dssp SSEEEEEET-TEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeC-CcEEEEECCCHHHHHHHHHHHHHHH
Confidence 689999885 4456666777888999999998644
No 16
>3aj4_A Pleckstrin homology domain-containing family B ME; antiparallel beta sheet, protein transport; HET: SEP EDO; 1.00A {Homo sapiens} PDB: 3via_A 2dhi_A
Probab=98.52 E-value=1.5e-07 Score=64.32 Aligned_cols=94 Identities=19% Similarity=0.284 Sum_probs=71.2
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEe-ecceeEeeeeecCCCCCCcceeehhh-------hccCCCCcc
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVL-HGSCIFFYLLSTDLSPQDSTVLSDVV-------EVASLPSIT 132 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl-~G~ciffyL~sTDLsPQdStllsDIV-------EVg~lP~f~ 132 (202)
-.+|||+-+.. -+.-|=.||+|| .|.+++||--..|-.|.+.+-+.... +|..+ .
T Consensus 6 ~~~G~L~K~g~--------------~~k~WkkR~fvL~~~~~L~yyk~~~~~~~~g~i~l~~~~i~l~~~~~v~~v---~ 68 (112)
T 3aj4_A 6 VKSGWLLRQST--------------ILKRWKKNWFDLWSDGHLIYYDDQTRQNIEDKVHMPMDCINIRTGQECRDT---Q 68 (112)
T ss_dssp SEEEEEEEECS--------------SSCCEEEEEEEECTTSEEEEESSTTCCSEEEEEEHHHHEEEEEEGGGCCSC---C
T ss_pred eEEEEEEeeCC--------------CCCCeeceEEEEeeCCEEEEEcCCCCCCCCccccccccceeeccccccccc---C
Confidence 46899998743 235799999999 99999999887787888877666543 44331 1
Q ss_pred cCCCce-EEEEEEEeecceeeeecccceeehhhHHHHhhc
Q 028920 133 RENGEM-QYCFYILTRHGLRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 133 rEdge~-~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~ 171 (202)
.+++.. .|+|-|.|.++=.|..+..++-..+.|+.||+.
T Consensus 69 ~~~~~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~ 108 (112)
T 3aj4_A 69 PPDGKSKDCMLQIVCRDGKTISLCAESTDDCLAWKFTLQD 108 (112)
T ss_dssp CSTTCCGGGEEEEEETTSCEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCCCcCcEEEEEecCCcEEEEEeCCHHHHHHHHHHHHH
Confidence 223333 689999988787888888889999999999973
No 17
>2dkp_A Pleckstrin homology domain-containing family A member 5; PH domain, pleckstrin homology domain-containing protein family A member 5; NMR {Homo sapiens}
Probab=98.50 E-value=3.1e-07 Score=63.67 Aligned_cols=98 Identities=20% Similarity=0.353 Sum_probs=73.7
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
-.+|||+-+.. .-..-|-.||+||.|.+++||---.|-.|.+.+.|.++ .|-..+. .+.....|
T Consensus 22 ~~~G~L~K~~~-------------~~~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~-~v~~~~~--~~~~~~~~ 85 (128)
T 2dkp_A 22 VRRGWLYKQDS-------------TGMKLWKKRWFVLSDLCLFYYRDEKEEGILGSILLPSF-QIALLTS--EDHINRKY 85 (128)
T ss_dssp CEEEEEEEECC-------------SSSCCEEEEEEEEETTEEEEESSTTCCSEEEEECGGGS-EEEECCG--GGCCSSCS
T ss_pred EEEEEEEEeCC-------------CCCCCceeEEEEEeCCEEEEECCCCCcccceEEEcCce-EEEEcCC--cccCCCCe
Confidence 46899998853 12457999999999999999998888899988888765 2322221 11224468
Q ss_pred EEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 141 CFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
+|-|.|..+=.|.....++-+.+.|+.||+.=+.
T Consensus 86 ~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~a~~ 119 (128)
T 2dkp_A 86 AFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAAL 119 (128)
T ss_dssp EEEEECSSSCCEEEECSSHHHHHHHHHHHHHHHS
T ss_pred EEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 9999988766677777788899999999986444
No 18
>1fgy_A GRP1; PH domain, signaling protein; HET: 4IP; 1.50A {Mus musculus} SCOP: b.55.1.1 PDB: 1fgz_A 1u2b_A 1fhw_A* 1fhx_A* 1u29_A* 1u27_A*
Probab=98.48 E-value=1.4e-07 Score=64.91 Aligned_cols=96 Identities=17% Similarity=0.413 Sum_probs=72.7
Q ss_pred hhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCce
Q 028920 59 SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEM 138 (202)
Q Consensus 59 sarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~ 138 (202)
..-.+|||+-+..- ...|=.||+||+|.+++||--..|-.|.+.+-|.++. |-.++ +...
T Consensus 4 ~~~~~G~L~K~g~~--------------~~~Wk~R~fvL~~~~L~yy~~~~~~~~~g~i~L~~~~-v~~~~-----~~~~ 63 (127)
T 1fgy_A 4 NPDREGWLLKLGGR--------------VKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLS-IREVL-----DPRK 63 (127)
T ss_dssp SCSEEEEEEEECSS--------------SCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCE-EEEEC-----CSSC
T ss_pred CCceEeEEEEECCC--------------CCCeEEEEEEEECCEEEEeCCCCCCCcceEEECCceE-EEEcc-----CCCC
Confidence 34578999988421 4579999999999999999988889999999998763 22221 3355
Q ss_pred EEEEEEEeecc---------------------eeeeecccceeehhhHHHHhhcccc
Q 028920 139 QYCFYILTRHG---------------------LRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 139 ~yaFyIlTrhG---------------------LR~ECSS~skiQVdsWL~al~~d~k 174 (202)
.++|-|.+..| -.|..+..++-..+.|+.||+.=+.
T Consensus 64 ~~~f~i~~~~~~~~~~~~~~~~~~~~~v~~~~r~~~l~a~s~~e~~~Wi~al~~~i~ 120 (127)
T 1fgy_A 64 PNCFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASIS 120 (127)
T ss_dssp SSEEEEECSSSTTCCCCCEEECTTSCEEECCCSEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CceEEEecCCccccccccccccCCcceecCCceEEEEECCCHHHHHHHHHHHHHHhc
Confidence 78999987643 2466777778889999999986554
No 19
>1x1g_A Pleckstrin 2; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.48 E-value=3.4e-07 Score=63.77 Aligned_cols=101 Identities=19% Similarity=0.286 Sum_probs=75.4
Q ss_pred hhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEee--cceeEeeeee-cCCCCCCcceeeh--hhhccCC--CCc
Q 028920 59 SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLH--GSCIFFYLLS-TDLSPQDSTVLSD--VVEVASL--PSI 131 (202)
Q Consensus 59 sarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~--G~ciffyL~s-TDLsPQdStllsD--IVEVg~l--P~f 131 (202)
....+|||+-|.. -...|=.||+||. |.+++||--. .|-.|.+++-|.+ |+++... |.-
T Consensus 17 ~~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~d~~~L~yy~~~~~~~~~~g~i~L~~~~v~~~~~~~~p~~ 82 (129)
T 1x1g_A 17 TVVKQGYLAKQGH--------------KRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTG 82 (129)
T ss_dssp EEEEEEEEEEECS--------------SSSSEEEEEEEEEESSCEEEEECSSSCCSSCSCCEESTTCCCEECCSSSSCSS
T ss_pred CEEEEEEEEEECC--------------CCCCeeeEEEEEeCCCCeEEEeCCCCcCCccceEEECcCCEEEEeCCCCCccc
Confidence 3457899998842 1668999999999 5788888655 7889999999986 4444433 432
Q ss_pred ccCCCceEEEEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 132 TRENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 132 ~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
... ....++|.|.|..+-.|..+..++-+.+.|+.||+.=+.
T Consensus 83 ~~~-~~~~~~F~I~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~ 124 (129)
T 1x1g_A 83 VKG-NVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLTS 124 (129)
T ss_dssp CSS-CCCSSCEEECCTTCCCEEECCSSHHHHHHHHHHHHHHSS
T ss_pred ccC-CCCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 211 114689999998876688888889999999999997653
No 20
>2d9v_A Pleckstrin homology domain-containing protein family B member 1; PH domain, phret1, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.46 E-value=3.4e-07 Score=65.78 Aligned_cols=98 Identities=16% Similarity=0.309 Sum_probs=70.5
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEe-ecceeEeeeeecCCCCCCcceee-hhhhc--cC-CCCccc-C
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVL-HGSCIFFYLLSTDLSPQDSTVLS-DVVEV--AS-LPSITR-E 134 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl-~G~ciffyL~sTDLsPQdStlls-DIVEV--g~-lP~f~r-E 134 (202)
-.+|||+-++. -+.-|=.||.|| ++.+++||--..|-.|.+.+++. ++++| |. ...... +
T Consensus 9 ~~~G~L~K~g~--------------~~k~WkkRwFVL~~~~~L~Yyk~~~~~~~~g~i~l~~~~~~i~~~~~~~~v~~~~ 74 (130)
T 2d9v_A 9 VRGGWLWRQSS--------------ILRRWKRNWFALWLDGTLGYYHDETAQDEEDRVVIHFNVRDIKVGQECQDVQPPE 74 (130)
T ss_dssp EEEEEEEEECS--------------SSCCEEEEEEEEETTTEEEEESSSSTTSEEEEEECTTTEEEEEEGGGCSSCCCCS
T ss_pred eEEEEEEeecC--------------ccCCceeeEEEEccCCEEEEEeCCCCCCcCceEecccceeEEeccccccccCCCC
Confidence 36899998732 245899999999 89999999877787888887665 33332 21 111112 2
Q ss_pred CCceEEEEEEEeecceeeeecccceeehhhHHHHhhcc
Q 028920 135 NGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTD 172 (202)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d 172 (202)
.....|+|-|.|..|-.|.....++-..+.|+.||+.=
T Consensus 75 ~~~~~~~F~I~~~~~r~~~l~A~s~~e~~~Wi~al~~a 112 (130)
T 2d9v_A 75 GRSRDGLLTVNLREGSRLHLCAETRDDAIAWKTALMEA 112 (130)
T ss_dssp SCCTTTEEEEEETTSCEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCCcCcEEEEEeCCCCEEEEEcCCHHHHHHHHHHHHHH
Confidence 22345899999977767877788888999999999853
No 21
>1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.43 E-value=6.8e-07 Score=60.84 Aligned_cols=100 Identities=17% Similarity=0.222 Sum_probs=75.1
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEee--cceeEeeeeecCCCCCCcceeehhhhccCCCCc-cc-CC
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLH--GSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSI-TR-EN 135 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~--G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f-~r-Ed 135 (202)
...+|||+-+.. -+.-|=.||+||. |.+++||--..|-.|.+.+-|.++..|-..+.. .. ..
T Consensus 8 ~~~~G~L~K~g~--------------~~~~Wk~R~fvL~~~~~~L~yy~~~~~~~~~g~i~L~~~~~v~~~~~~~~~~~~ 73 (117)
T 1v5u_A 8 RSYEGILYKKGA--------------FMKPWKARWFVLDKTKHQLRYYDHRMDTECKGVIDLAEVEAVAPGTPTIGAPKT 73 (117)
T ss_dssp SSEEEEEEECCC--------------SSSCCEEEEEEEETTTTEEEEESSSSCSSCCCEEEGGGEEEEECCCCCTTSCSS
T ss_pred ccEEEEEEecCC--------------CCCCceeeEEEEECCCCEEEEeecCCCCccceEEEccCcEEEeecCcccccccc
Confidence 357899998852 1457999999999 889999998889999999999998766543321 11 22
Q ss_pred CceEEEEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 136 GEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 136 ge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
....++|-|.|.+. .|.....++-..+.|+.||+.=+.
T Consensus 74 ~~~~~~F~i~~~~r-~~~l~a~s~~e~~~Wi~al~~~i~ 111 (117)
T 1v5u_A 74 VDEKAFFDVKTTRR-VYNFCAQDVPSAQQWVDRIQSCLS 111 (117)
T ss_dssp SCTTTCEEEEESSC-EEEEECSSHHHHHHHHHHHHTTCC
T ss_pred CCCCeEEEEECCCc-eEEEECCCHHHHHHHHHHHHHHhc
Confidence 34458999977544 455567778889999999987543
No 22
>1btn_A Beta-spectrin; signal transduction protein; HET: I3P; 2.00A {Mus musculus} SCOP: b.55.1.1 PDB: 1mph_A
Probab=98.41 E-value=7.9e-07 Score=59.56 Aligned_cols=98 Identities=15% Similarity=0.343 Sum_probs=69.0
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecC------CCCCCcceeehh-hhccCCCCcccC
Q 028920 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTD------LSPQDSTVLSDV-VEVASLPSITRE 134 (202)
Q Consensus 62 lSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTD------LsPQdStllsDI-VEVg~lP~f~rE 134 (202)
++|||+-+..|.. +|.+ .-...|-.||+||+|.+++||--..| ..|..++-|... |++. | +
T Consensus 1 ~eG~L~kk~~~~~-~gk~-----~~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~~--~----~ 68 (106)
T 1btn_A 1 MEGFLNRKHEWEA-HNKK-----ASSRSWHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVA--L----D 68 (106)
T ss_dssp CEEEEEEEEEECS-TTCB-----CSCCCCEEEEEEEETTEEEEESSHHHHHHTCCSSSCCCEECTTCEEEEC--S----S
T ss_pred CccEEEEEEEEeC-CCcc-----CCCCChhEEEEEEECCEEEEEeCCcccccCCCCCCcceEECCCCEEEEc--c----c
Confidence 4799999987652 2332 23567999999999999999976553 224444444332 2221 1 2
Q ss_pred CCceEEEEEEEeecceeeeecccceeehhhHHHHhhc
Q 028920 135 NGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~ 171 (202)
...-.++|-|.|..|-.|..+..++-....|+.||+.
T Consensus 69 ~~~~~~~F~i~~~~~~~~~~~A~s~~e~~~Wi~ai~~ 105 (106)
T 1btn_A 69 YKKKKHVFKLRLSDGNEYLFQAKDDEEMNTWIQAISS 105 (106)
T ss_dssp CCSSSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHH
T ss_pred ccCCccEEEEEecCCCEEEEECCCHHHHHHHHHHHhc
Confidence 3345689999998888888888888999999999974
No 23
>2y7b_A Actin-binding protein anillin; cell cycle; 1.90A {Homo sapiens}
Probab=98.39 E-value=3.1e-07 Score=64.33 Aligned_cols=96 Identities=21% Similarity=0.336 Sum_probs=70.1
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecC---CCCCCcceeehhh--hccCCCCcccCC
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTD---LSPQDSTVLSDVV--EVASLPSITREN 135 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTD---LsPQdStllsDIV--EVg~lP~f~rEd 135 (202)
-.+|||+.+.. |. -+.-|-.||+||.|.+++||-...| -.|.+++-|.++. +|...|. +.
T Consensus 6 ~~~G~L~K~~~-----~~-------~~~~WkrRwfvL~~~~L~yyk~~~d~~~~~p~g~I~L~~~~~~~v~~~~~---~~ 70 (134)
T 2y7b_A 6 EERGFLTIFED-----VS-------GFGAWHRRWCVLSGNCISYWTYPDDEKRKNPIGRINLANCTSRQIEPANR---EF 70 (134)
T ss_dssp CEEEEEEEEEE-----ET-------TEEEEEEEEEEEETTEEEEESSHHHHTTSCCSEEEEGGGBCSSSCEECCT---TT
T ss_pred eEEeeEEEEcC-----CC-------CCCCcEEEEEEEECCEEEEECCCCcccccCceEEEEhhhCccccccccch---hh
Confidence 46899999853 11 2568999999999999999986666 8999999998864 3544432 11
Q ss_pred CceEEEEEEEeec----------------c---eeeeecccceeehhhHHHHhhc
Q 028920 136 GEMQYCFYILTRH----------------G---LRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 136 ge~~yaFyIlTrh----------------G---LR~ECSS~skiQVdsWL~al~~ 171 (202)
..-.|+|-|.|.. | -.|..+..++-+.+.|+.||+.
T Consensus 71 ~~~~~~F~i~~~~p~~~~~~~~~~~~~~~~~~~r~~~l~A~s~~e~~~Wi~al~~ 125 (134)
T 2y7b_A 71 CARRNTFELITVRPQREDDRETLVSQCRDTLCVTKNWLSADTKEERDLWMQKLNQ 125 (134)
T ss_dssp CCCTTEEEEEEEEECCTTCCCCSSEEEETTEEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred ccCCCEEEEEecCCCcccccccccccccCCCceEEEEEECCCHHHHHHHHHHHHH
Confidence 2345899998731 1 1366666777889999999985
No 24
>1v5p_A Pleckstrin homology domain-containing, family A; TAPP2, the pleckstrin homology domain, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=98.38 E-value=5.3e-07 Score=66.41 Aligned_cols=103 Identities=18% Similarity=0.335 Sum_probs=75.0
Q ss_pred HhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEee---cceeEeeee----ecCCCCCCcceeehhhhccCCC
Q 028920 57 LRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLH---GSCIFFYLL----STDLSPQDSTVLSDVVEVASLP 129 (202)
Q Consensus 57 LRsarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~---G~ciffyL~----sTDLsPQdStllsDIVEVg~lP 129 (202)
-|..+.+|||+.+.. .-+..|-.||.||. |.++|||=- ..+=.|.+++.|..+..|-..+
T Consensus 12 ~~~~~~~G~L~K~g~-------------~~~k~WkrRwFvL~~~~~~~L~Y~k~~~~~~~~~~~~G~I~L~~~~~V~~~~ 78 (126)
T 1v5p_A 12 DRQNRICGFLDIEDN-------------ENSGKFLRRYFILDTQANCLLWYMDNPQNLAVGAGAVGSLQLTYISKVSIAT 78 (126)
T ss_dssp CCCCCEECCEEEECT-------------TCSSCEEEEEEEEETTTTEEEEESSCTTTSCTTCCCSEEEETTTCCEEEECC
T ss_pred cCCCceEEEEEEeCC-------------CCCCCccceEEEEecCCCCEEEEECCCCCCCCCceeeEEEECCCccEEecCC
Confidence 355678999998842 11468999999999 777777765 5677899999999877776554
Q ss_pred CcccCCCceEEEEEEEeecceeeeecccceeehhhHHHHhhccccc
Q 028920 130 SITRENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKL 175 (202)
Q Consensus 130 ~f~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~ 175 (202)
.-. ...-+|+|-|-|-.- .|..+..++-+.+.|+.||+.=.+.
T Consensus 79 ~~~--~~~~~~~F~i~t~~r-~y~l~A~s~~e~~~Wi~al~~a~~~ 121 (126)
T 1v5p_A 79 PKQ--KPKTPFCFVINALSQ-RYFLQANDQKDLKDWVEALNQASKS 121 (126)
T ss_dssp TTT--SCSCSSEEEEECSSC-EEEEECSSHHHHHHHHHHHHHTTTT
T ss_pred ccc--CCCCCEEEEEECCCE-EEEEECCCHHHHHHHHHHHHHHHhc
Confidence 211 224578997765433 3666777788899999999976654
No 25
>2w2x_D 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2; hydrolase, phospholipase C, phosphoinositides, RHO gtpases, RAC, SH2 domain; HET: GSP; 2.30A {Homo sapiens} PDB: 2w2w_A* 2w2x_C* 2k2j_A
Probab=98.36 E-value=7.3e-07 Score=64.19 Aligned_cols=98 Identities=13% Similarity=0.271 Sum_probs=63.1
Q ss_pred HHhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeec----CCCC-----CCcceeehhhhcc
Q 028920 56 ILRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLST----DLSP-----QDSTVLSDVVEVA 126 (202)
Q Consensus 56 vLRsarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sT----DLsP-----QdStllsDIVEVg 126 (202)
-|+..-.+||||-|.. -+--|-+||+||.|.|+|||--.+ +-+| .+++-|+..+ |-
T Consensus 8 ~~~~~~k~G~L~K~g~--------------~~k~Wk~RwfVL~~~~L~yyk~~~~~~~e~~plg~~~~G~I~L~~~~-v~ 72 (124)
T 2w2x_D 8 KKDEHKQQGELYMWDS--------------IDQKWTRHFCAIADAKLSFSDDIEQTMEEDNPLGSLCRGILDLNTYN-VV 72 (124)
T ss_dssp -----CCEEEEEEEET--------------TTTEEEEEEEEEETTEEEEEEEHHHHHHCSSCCCCSCSEEEEGGGEE-EE
T ss_pred hhhhcceeEEEEEECC--------------CCCCceEeEEEEECCEEEEEcccccccccccccCCccccEEECCCCE-EE
Confidence 3455668999998851 145799999999999999998643 2233 5555565544 21
Q ss_pred CCCCcccCCCceEEEEEEEeecc--eeeeecccceeehhhHHHHhhc
Q 028920 127 SLPSITRENGEMQYCFYILTRHG--LRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 127 ~lP~f~rEdge~~yaFyIlTrhG--LR~ECSS~skiQVdsWL~al~~ 171 (202)
..|. +...-.|+|-|.+.++ -.|..+..+.-+...|+.||+.
T Consensus 73 ~~~~---~~~~k~~~F~I~~~~~~~~~~~~~A~s~ee~~~Wi~ai~~ 116 (124)
T 2w2x_D 73 KAPQ---GKNQKSFVFILEPKQQGDPPVEFATDKVEELFEWFQSIRE 116 (124)
T ss_dssp ECTT---CBTTBSEEEEEEECC--CCCEEEEECCCHHHHHHHHHHHH
T ss_pred EccC---CcCCCCEEEEEECCCCCCceEEEEECCHHHHHHHHHHHHH
Confidence 2221 2235679999988764 2355555667788999999984
No 26
>2cof_A Protein KIAA1914; PH domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.34 E-value=1.1e-06 Score=60.47 Aligned_cols=93 Identities=22% Similarity=0.295 Sum_probs=65.1
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceee--hh-hhccCCCCcccCCC
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLS--DV-VEVASLPSITRENG 136 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStlls--DI-VEVg~lP~f~rEdg 136 (202)
...+|||+.+ -..-|=.||+||.|.+++||--..| .|...+.+. .. |++ .| +.
T Consensus 8 ~~~~G~L~K~----------------~~k~Wk~RwfvL~~~~L~yyk~~~~-~~~~~~~i~l~~~~v~~--~~-----~~ 63 (107)
T 2cof_A 8 LETSSYLNVL----------------VNSQWKSRWCSVRDNHLHFYQDRNR-SKVAQQPLSLVGCEVVP--DP-----SP 63 (107)
T ss_dssp CTTCCEEEEE----------------ETTEEEEEEEEECSSCEEEECSSTT-CSEEEEEECTTTCEEEC--CC-----BT
T ss_pred CcEeEEEEEe----------------cCCCcceEEEEEECCEEEEEeCCcc-cCCCeeEEeccceEEEE--CC-----CC
Confidence 4579999986 2457999999999999999986655 444333322 21 222 12 23
Q ss_pred ceEEEEEEEeecceeeeecccceeehhhHHHHhhcccccc
Q 028920 137 EMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLD 176 (202)
Q Consensus 137 e~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~ 176 (202)
+-.|+|-|.|..+=.|..+..++-+.+.|+.||+.-+...
T Consensus 64 ~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~~~~~~ 103 (107)
T 2cof_A 64 DHLYSFRILHKGEELAKLEAKSSEEMGHWLGLLLSESGSG 103 (107)
T ss_dssp TBSCEEEEEETTEEEEEEECSSHHHHHHHHHHHHHHSSCS
T ss_pred CCCeEEEEEeCCCeEEEEEcCCHHHHHHHHHHHHHHHcCC
Confidence 4568999998644446777777888999999999766543
No 27
>2d9x_A Oxysterol binding protein-related protein 11; PH domain, OSBP-related protein 11, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=8.1e-07 Score=62.22 Aligned_cols=94 Identities=21% Similarity=0.351 Sum_probs=73.0
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeec--ceeEeeeeecCC--CCCCcceeehhhhccCCCCcccCC
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHG--SCIFFYLLSTDL--SPQDSTVLSDVVEVASLPSITREN 135 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G--~ciffyL~sTDL--sPQdStllsDIVEVg~lP~f~rEd 135 (202)
...+|||+-+.. -+.-|=.||+||.| .+++||--..|- .|.+++-|.+++ |.. +
T Consensus 8 ~~~~G~L~K~~~--------------~~~~Wk~R~fvL~~~~~~L~Yyk~~~~~~~~~~g~I~L~~~~-v~~-------~ 65 (120)
T 2d9x_A 8 ENVYGYLMKYTN--------------LVTGWQYRFFVLNNEAGLLEYFVNEQSRNQKPRGTLQLAGAV-ISP-------S 65 (120)
T ss_dssp CCCEEEEEEEEE--------------TTTEEEEEEEEECTTTCEEEEESSGGGSSSCCSEEEECTTCC-EEC-------C
T ss_pred CcEEEEEEecCC--------------CCCCceEEEEEEECCCCEEEEEecCcccCCCccceEEcceEE-EEe-------c
Confidence 357899999873 24579999999996 588888776664 899999998864 322 2
Q ss_pred CceEEEEEEEeecceeeeecccceeehhhHHHHhhccccc
Q 028920 136 GEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKL 175 (202)
Q Consensus 136 ge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~ 175 (202)
++..++|-|.|..|=.|.....++-+.+.|+.||+.=++.
T Consensus 66 ~~~~~~F~i~~~~~r~~~l~a~s~~e~~~Wi~al~~~~~~ 105 (120)
T 2d9x_A 66 DEDSHTFTVNAASGEQYKLRATDAKERQHWVSRLQICTQH 105 (120)
T ss_dssp SSSSSCEEECCSSSCCEEECCSSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 2345899999988878888888899999999999965443
No 28
>2dhk_A TBC1 domain family member 2; PH domain, paris-1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=1.7e-06 Score=60.85 Aligned_cols=92 Identities=24% Similarity=0.314 Sum_probs=71.3
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecc--eeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCc
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS--CIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGE 137 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~--ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge 137 (202)
..++|||+-+..- .-+.-|=.||+||.|. +|+||--..|-.|.+++-|.++..+-. ...
T Consensus 8 ~~~~G~L~K~g~~------------~~~k~WkkRwfvL~~~~~~L~Yy~~~~~~~~~g~I~L~~~~~~~~-------~~~ 68 (119)
T 2dhk_A 8 KKLCGYLSKFGGK------------GPIRGWKSRWFFYDERKCQLYYSRTAQDANPLDSIDLSSAVFDCK-------ADA 68 (119)
T ss_dssp CCCEEEEEECSCS------------SSSCCCEEEEEEEETTTTEEEEESSTTCCSCSEEEEGGGCEEEEC-------TTG
T ss_pred CcEEEEEEecCCC------------CCCCCceeEEEEEECCccEEEEECCCCCcccccEEECCCCEEEec-------CCC
Confidence 3578999987430 1246799999999999 999999889999999999998876542 122
Q ss_pred eEEEEEEEeecceeeeecccceeehhhHHHHhhc
Q 028920 138 MQYCFYILTRHGLRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 138 ~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~ 171 (202)
..++|-|.|. +=.|.....++-+.+.|+.||+.
T Consensus 69 ~~~~F~i~~~-~r~~~l~a~s~~e~~~Wi~al~~ 101 (119)
T 2dhk_A 69 EEGIFEIKTP-SRVITLKAATKQAMLYWLQQLQM 101 (119)
T ss_dssp GGCEEEEECS-SCCEEEECSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEeC-CcEEEEECCCHHHHHHHHHHHHH
Confidence 3569999886 55566666778889999999985
No 29
>1v88_A Oxysterol binding protein-related protein 8; vesicle transport, pleckstrin homology domain, phosphatidylinositol binding, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.24 E-value=2.1e-06 Score=63.67 Aligned_cols=94 Identities=16% Similarity=0.304 Sum_probs=69.4
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEEE
Q 028920 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQYC 141 (202)
Q Consensus 62 lSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~ya 141 (202)
.+|||+.|. -+..|=.||.||.+.|+|||--..|-.|.+++.|.... |-.. ...+-.|+
T Consensus 10 k~GwL~K~g---------------~~k~WkrRWfVLk~~~L~yyk~~~~~~p~G~I~L~~~~-v~~~-----~~~~~~~~ 68 (130)
T 1v88_A 10 MADWLKIRG---------------TLKSWTKLWCVLKPGVLLIYKTQKNGQWVGTVLLNACE-IIER-----PSKKDGFC 68 (130)
T ss_dssp EEEEEEECC---------------SSSSCEEEEEEEETTEEEEESCSSSCCCCEEEECSSCE-ECCC-----CTTTSSCE
T ss_pred EEeEEEEeC---------------CCCCceEEEEEEECCEEEEECCCCCCCceEEEEcCCCE-EEEC-----CCCCCCeE
Confidence 689999853 14579999999999999999999999999999997643 3111 22334599
Q ss_pred EEEEeecc----------------------ee-eeecccceeehhhHHHHhhcccccc
Q 028920 142 FYILTRHG----------------------LR-IECSSISKIQVYSWLSALQTDCKLD 176 (202)
Q Consensus 142 FyIlTrhG----------------------LR-~ECSS~skiQVdsWL~al~~d~k~~ 176 (202)
|-|.+... -| |..+..++-+.+.|+.||+.=.+..
T Consensus 69 F~i~~~~~~~i~~~~g~~~~~~g~~~~~~~~~~~~f~A~s~~e~~~Wi~ai~~a~~~~ 126 (130)
T 1v88_A 69 FKLFHPLEQSIWAVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELALKSG 126 (130)
T ss_dssp EEEECTTCCCCSCSSCTTSCSCSCCCSCCCSSCCEEECSSHHHHHHHHHHHHHHHTTT
T ss_pred EEEEcCCccccccccCCcccccccccccCCceEEEEECCCHHHHHHHHHHHHHHHhcC
Confidence 99986321 11 5555667788999999999765543
No 30
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=98.24 E-value=1.2e-06 Score=73.79 Aligned_cols=131 Identities=21% Similarity=0.328 Sum_probs=79.5
Q ss_pred hHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHh--------------hhhcceeEEEeeecccCCCCCCCCCCCCcccc
Q 028920 25 TATELESLRSELADLEDREAHLKAQLEHVDEILR--------------SARLSGYLYIRTRWKPLPGEPPPIDDTDVDDW 90 (202)
Q Consensus 25 t~~EvesLRsEla~~eEREa~lkAqLehvDEvLR--------------sarlSgYLyiRtRW~aLpgEpppiDDtdVDDW 90 (202)
...+++++|.++....++-......+...+...- ...-.||||.|+. .|.+ .-.|
T Consensus 252 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~G~L~k~~~----~g~~-------~~~W 320 (407)
T 4h8s_A 252 VADMVQSIQVELEAEAEKMRVSQQELLSVDESVYTPDSDVAAPQINRNLIQKAGYLNLRNK----TGLV-------TTTW 320 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCTTTTCTTSCSSSCCCCCSCSCCEEEEEEEEE----CSSS-------CEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCCCCCcccccccCCcceeeceeeeecc----CCCC-------CCCc
Confidence 4456777777776555544444444444333221 1134699999986 2322 2459
Q ss_pred ceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCccc-CCCceEEEEEEEeeccee-eeecccceeehhhHHHH
Q 028920 91 LPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITR-ENGEMQYCFYILTRHGLR-IECSSISKIQVYSWLSA 168 (202)
Q Consensus 91 lpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~r-Edge~~yaFyIlTrhGLR-~ECSS~skiQVdsWL~a 168 (202)
-.||.||+|.+++||- ..+-.|...+-|.. -+... ++.+-+|||-|.|-.|-| |.=.-.++-..+.|+.|
T Consensus 321 ~rrwfvl~~~~l~y~~-~~~~~~~~~~~l~~-------~~v~~~~~~~r~~cF~i~~~~~~~~~~l~A~s~~e~~~Wi~a 392 (407)
T 4h8s_A 321 ERLYFFTQGGNLMCQP-RGAVAGGLIQDLDN-------CSVMAVDCEDRRYCFQITTPNGKSGIILQAESRKENEEWICA 392 (407)
T ss_dssp EEEEEEECSSCEECCC-TTCSSCCCCBCSSC-------CEEEEECCTTCSSEEEEECTTSSCCEEEECSSSHHHHHHHHH
T ss_pred eEEEEEEECCEEEEEe-CCCCCCCeEEECCc-------eEEEECCCCCCCceEEEEecCCCceEEEEcCCHHHHHHHHHH
Confidence 9999999999998884 44545544332211 01111 234568999999976543 44444566778899999
Q ss_pred hhcccc
Q 028920 169 LQTDCK 174 (202)
Q Consensus 169 l~~d~k 174 (202)
|+.=.+
T Consensus 393 i~~a~~ 398 (407)
T 4h8s_A 393 INNISR 398 (407)
T ss_dssp HHHHHS
T ss_pred HHHHHH
Confidence 986444
No 31
>3cxb_B Pleckstrin homology domain-containing family M member 2; SIFA, SKIP, complex, virulence, cytoplasm, membrane, polymorphism, signaling protein; 2.60A {Homo sapiens} PDB: 3hw2_B
Probab=98.24 E-value=2.1e-06 Score=60.80 Aligned_cols=98 Identities=18% Similarity=0.280 Sum_probs=69.2
Q ss_pred ceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehh-hhccCCCCcccCCCceEEE
Q 028920 63 SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDV-VEVASLPSITRENGEMQYC 141 (202)
Q Consensus 63 SgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDI-VEVg~lP~f~rEdge~~ya 141 (202)
.|||+-+ +|..+. -+.-|=+||+||.|.|+|||--..|-.|..++-|... +++ ....++.+-.++
T Consensus 3 eG~L~kK------~g~~~~----~~k~Wk~rwfvL~~~~L~~yk~~~~~~p~~~i~l~~~~~~~----~~~~~~~~r~~~ 68 (112)
T 3cxb_B 3 EGMLHYK------AGTSYL----GKEHWKTCFVVLSNGILYQYPDRTDVIPLLSVNMGGEQCGG----CRRANTTDRPHA 68 (112)
T ss_dssp EEEEEEC------CSCCCS----SCCCCEEEEEEEETTEEEEESSSSCCSCSEEEETTC-CEEE----EEECCCSSCTTE
T ss_pred eEEEEEe------CCCCCC----CCCCceEEEEEEECCEEEEECCCCCCCccceEEecCCEEEe----eeccCCCCCCeE
Confidence 6999866 233211 3568999999999999999998888888876544321 210 011123345689
Q ss_pred EEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 142 FYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 142 FyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
|-|.+..|-.|.-+..+.-+.++|+.||+.-..
T Consensus 69 F~l~~~~~~~y~f~A~s~ee~~~Wi~ai~~~~~ 101 (112)
T 3cxb_B 69 FQVILSDRPCLELSAESEAEMAEWMQHLCQAVS 101 (112)
T ss_dssp EEEEETTSCCEEEECSSHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 999988886777777778889999999986543
No 32
>1u5e_A SRC-associated adaptor protein; novel dimerization domain, PH domain, signaling protein; 2.60A {Mus musculus} SCOP: b.55.1.1 PDB: 2otx_A
Probab=98.22 E-value=1.6e-06 Score=68.74 Aligned_cols=102 Identities=17% Similarity=0.269 Sum_probs=77.8
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceE
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQ 139 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~ 139 (202)
...+|||+-+..-..+ -+.-|=.||+||+|.+++||--..|-.|.+.+-|.++.-+- .|+. ..++.-.
T Consensus 106 v~k~G~L~Kkg~~~~~----------~~k~WkkRwfVL~~~~L~Yyk~~~~~~p~g~I~L~~~~~v~-~~~~-~~~~~k~ 173 (211)
T 1u5e_A 106 VIKAGYLEKRRKDHSF----------LGFEWQKRWCALSKTVFYYYGSDKDKQQKGEFAIDGYDVRM-NNTL-RKDGKKD 173 (211)
T ss_dssp EEEEEEEEEEEHHHHT----------TTCCCEEEEEEEETTEEEEESSTTCSSCSEEEECTTCEEEE-CGGG-CSSTTGG
T ss_pred ccEEEEEEEECCCCCc----------CCCCcEeEEEEEECCEEEEEcCCCCccceEEEEeCCcEEEE-cCCc-cccCCCC
Confidence 4578999998753211 13479999999999999999999999999999998876552 2221 2344456
Q ss_pred EEEEEEeecceeeeecccceeehhhHHHHhhccc
Q 028920 140 YCFYILTRHGLRIECSSISKIQVYSWLSALQTDC 173 (202)
Q Consensus 140 yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~ 173 (202)
++|.|.|..+=.|.....++-..+.|+.||+.=+
T Consensus 174 ~~F~I~t~~~r~~~l~A~s~~e~~~Wi~aL~~ai 207 (211)
T 1u5e_A 174 CCFEICAPDKRIYQFTAASPKDAEEWVQQLKFIL 207 (211)
T ss_dssp GEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCCCCEEEEEcCCHHHHHHHHHHHHHHH
Confidence 8999999776777777778889999999998533
No 33
>3tca_A Amyloid beta A4 precursor protein-binding family 1-interacting protein; RA domain, RBD, PH domain; 2.35A {Mus musculus}
Probab=98.22 E-value=1e-06 Score=68.95 Aligned_cols=95 Identities=16% Similarity=0.327 Sum_probs=69.2
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhcc--CCCCccc-CCCc
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVA--SLPSITR-ENGE 137 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg--~lP~f~r-Edge 137 (202)
.++||||.|+.- ..-|=.||.||+|.++|||-...|-.|.+.+.|.++..+. ....... ....
T Consensus 169 ~~~G~L~k~~~~--------------~k~WkkR~fvL~~~~L~yyk~~~~~~~~~~i~l~~l~~~~v~~~~~~~~~~~~~ 234 (291)
T 3tca_A 169 ELEGALYLKEDG--------------KKSWKRRYFLLRASGIYYVPKGKTKTSRDLACFIQFENVNIYYGIQCKMKYKAP 234 (291)
T ss_dssp CCEEEEEEECTT--------------SSCEEEEEEEECSSEEEECCTTCCSSTTTCEEEEEGGGCEEEEECSHHHHHCCS
T ss_pred ceEEEEEEeCCC--------------CCCceEEEEEEeCCEEEEEecCccccccCceeeccceeEEEEecCccccccCCC
Confidence 478999998531 2469999999999999999999999999999998764432 2222222 2345
Q ss_pred eEEEEEEEeecc------eeeeecccceeehhhHHHHhh
Q 028920 138 MQYCFYILTRHG------LRIECSSISKIQVYSWLSALQ 170 (202)
Q Consensus 138 ~~yaFyIlTrhG------LR~ECSS~skiQVdsWL~al~ 170 (202)
..|+|-|.+.++ ..|-| ..++-..+.|++||+
T Consensus 235 ~~~~F~i~~~~~~~~~~~~~~l~-A~s~~e~~~Wi~air 272 (291)
T 3tca_A 235 TDHCFVLKHPQIQKESQYIKYLC-CDDARTLSQWVMGIR 272 (291)
T ss_dssp SSCEEEEECTTCCSCCTTSEEEE-CSSHHHHHHHHHHHH
T ss_pred CCeEEEEEcCCCCCCCceEEEEE-CCCHHHHHHHHHHHH
Confidence 689999987432 23334 345667899999997
No 34
>1unq_A RAC-alpha serine/threonine kinase; transferase, pleckstrin homology domain, PKB, AKT, phosphoinositide, serine/threonine-protein kinase; HET: 4IP; 0.98A {Homo sapiens} SCOP: b.55.1.1 PDB: 1h10_A* 1unr_A 2uzs_A* 2uzr_A 2uvm_A* 1unp_A 2x18_A* 1p6s_A
Probab=98.22 E-value=7e-07 Score=62.30 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=68.5
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeec-ceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHG-SCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQ 139 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G-~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~ 139 (202)
..+|||+-+.. -+.-|-.||+||.| .+++||--..|-.|.+.+-|..+.-++.. ....+..-.
T Consensus 9 ~~~G~L~K~g~--------------~~k~WkkRwfvL~~~~~L~yy~~~~~~~~~g~i~L~~~~~~~~~--~~~~~~~~~ 72 (125)
T 1unq_A 9 VKEGWLHKRGE--------------YIKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQ--LMKTERPRP 72 (125)
T ss_dssp EEEEEEEEECS--------------SSCCEEEEEEEEETTSEEEEESSCCCSHHHHTSCSEEEECTTCE--EEEECSSST
T ss_pred eEEeeEEeccC--------------CccCccCcEEEEecCCEEEEEeCCCCCCCCceeEccceeEEeee--ecccccCCC
Confidence 46899998743 14679999999996 59999988888778888777766433210 011223445
Q ss_pred EEEEEEee---cceeeeecccceeehhhHHHHhhccc
Q 028920 140 YCFYILTR---HGLRIECSSISKIQVYSWLSALQTDC 173 (202)
Q Consensus 140 yaFyIlTr---hGLR~ECSS~skiQVdsWL~al~~d~ 173 (202)
++|-|.+. .+-.|..+..++-..+.|+.||+.=+
T Consensus 73 ~~F~I~~~~~~~~~~~~~~a~s~~e~~~Wi~al~~~~ 109 (125)
T 1unq_A 73 NTFIIRCLQWTTVIERTFHVETPEEREEWTTAIQTVA 109 (125)
T ss_dssp TEEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CEEEEEecCCCCceeEEEEeCCHHHHHHHHHHHHHHH
Confidence 89999873 34455566777888999999998543
No 35
>2dtc_A RAL guanine nucleotide exchange factor ralgps1A; PH domain, protein binding, structural genomics, NPPSFA; 1.70A {Mus musculus}
Probab=98.20 E-value=3.6e-06 Score=64.38 Aligned_cols=102 Identities=21% Similarity=0.410 Sum_probs=75.7
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeec---------CCCCCCcceeeh-hhhccCCCCc
Q 028920 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLST---------DLSPQDSTVLSD-VVEVASLPSI 131 (202)
Q Consensus 62 lSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sT---------DLsPQdStllsD-IVEVg~lP~f 131 (202)
+.|||+-.+=.. -|.-|. |--|-.|+|||.|.|+|||---+ +-.|...+-|.. .||+..
T Consensus 3 ~~G~L~rk~llK--~G~k~~-----~ksWkr~W~vL~g~~L~yf~~~~~~~~~~~~~~~~P~~~i~L~g~~V~~~e---- 71 (126)
T 2dtc_A 3 MEGPLRRKTLLK--EGRKPA-----LSSWTRYWVVLSGATLLYYGAKSLRGTDRKHYKSTPGKKVSIVGWMVQLPD---- 71 (126)
T ss_dssp EEEEEEEEEEEB--TTBCCS-----SCCCEEEEEEEETTEEEEEEBSSSCCSSGGGBCSSCSEEEECTTCEEECCC----
T ss_pred eeeeeeeeehhh--cCCccc-----ccCcccEEEEEeCCEEEEEcccccccccccccccCCCceEEeCCCEEEecC----
Confidence 578987664443 566643 67999999999999999998554 556776665543 344333
Q ss_pred ccCCCceEEEEEEEee-cceeeeecccceeehhhHHHHhhccccccC
Q 028920 132 TRENGEMQYCFYILTR-HGLRIECSSISKIQVYSWLSALQTDCKLDY 177 (202)
Q Consensus 132 ~rEdge~~yaFyIlTr-hGLR~ECSS~skiQVdsWL~al~~d~k~~~ 177 (202)
+.+-.++|.|.+. +|-.|-=+..++...+.|++||+.=|....
T Consensus 72 ---~~~~~~~F~L~~~~~G~~Y~fqA~s~~~~~~W~~ai~~a~~~~~ 115 (126)
T 2dtc_A 72 ---DPEHPDIFQLNNPDKGNVYKFQTGSRFHAILWHKHLDDACKSSR 115 (126)
T ss_dssp ---CTTSTTEEEEECTTSCSEEEEECSSHHHHHHHHHHHHHHHTSCC
T ss_pred ---CCCCCCEEEEeeCCCCCEEEEeCCCHHHHHHHHHHHHHHHhcCC
Confidence 3334579999987 898888888888889999999998877444
No 36
>1wi1_A Calcium-dependent activator protein for secretion, CAPS; PH domain, PIP2 binding site, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.19 E-value=3.1e-06 Score=65.44 Aligned_cols=105 Identities=19% Similarity=0.279 Sum_probs=78.0
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeee----eecCCCCCCcceeehhh--hccCCCCcccC
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYL----LSTDLSPQDSTVLSDVV--EVASLPSITRE 134 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL----~sTDLsPQdStllsDIV--EVg~lP~f~rE 134 (202)
--+||||-+.+ . -+..|=-||.||.|.|+|||= .-.+-.|.+++.|.... ++.+-| +
T Consensus 9 ~~~G~L~KqG~-------~------~~K~WKrRwFVL~~~~LyYfk~~~~~~~~~~p~G~I~L~g~tV~~~~~~~----~ 71 (126)
T 1wi1_A 9 KHSGYLWAIGK-------N------VWKRWKKRFFVLVQVSQYTFAMCSYREKKAEPQELLQLDGYTVDYTDPQP----G 71 (126)
T ss_dssp EEEEEEEEECS-------S------SCCSCEEEEEEEEEEETTEEEEEECCSSSSCCSEEEECSSCEEEECCCCS----S
T ss_pred ceeEEEEEeCC-------C------cccccceEEEEEeCCEEEEEEcccccccCCCCceEEECCCcEEEEecCCc----c
Confidence 35899998743 0 123799999999999999996 66788899999887631 333333 2
Q ss_pred CCceEEEEEEEeecceeeeecccceeehhhHHHHhhccccccCCCCCCC
Q 028920 135 NGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLDYEPSTPN 183 (202)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~~~~~~~n 183 (202)
...-+|+|-|.+ +|=+|-=+..++-....|++||+.=......+..|.
T Consensus 72 ~~~~k~~F~~v~-~~~ty~~~Adseee~~~WikAi~~A~~~~~~~~~~~ 119 (126)
T 1wi1_A 72 LEGGRAFFNAVK-EGDTVIFASDDEQDRILWVQAMYRATGQSHKPVPPT 119 (126)
T ss_dssp CCSCSSEEEEEC-SSCEEEEECSSHHHHHHHHHHHHHHHTCSSCCCCCC
T ss_pred cccCceEEEEec-CCceEEEEcCCHHHHHHHHHHHHHHhccccCCCCCC
Confidence 234578998875 588888888888899999999997776666665554
No 37
>2lul_A Tyrosine-protein kinase TEC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, transferase; NMR {Homo sapiens}
Probab=98.16 E-value=6.7e-06 Score=62.18 Aligned_cols=106 Identities=16% Similarity=0.139 Sum_probs=76.7
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCC-CCCCcceeehhhhccCCCCcccC-CCce
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDL-SPQDSTVLSDVVEVASLPSITRE-NGEM 138 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDL-sPQdStllsDIVEVg~lP~f~rE-dge~ 138 (202)
=+.|||+-|++=..-- -.-.|=.||+||.+.+|+||=-..|- .|.+++.|+++..|-.++.-... ..+.
T Consensus 16 i~EG~L~Kr~~~kk~~---------~~knWKkRwFVL~~~~L~Yyk~~~~~~~~~G~I~L~~~~~v~~~~~~~~~~~~~~ 86 (164)
T 2lul_A 16 ILEEILIKRSQQKKKT---------SPLNYKERLFVLTKSMLTYYEGRAEKKYRKGFIDVSKIKCVEIVKNDDGVIPCQN 86 (164)
T ss_dssp EEEEEEEEECCCCSSS---------CCCCEEEEEEEEESSEEEEECCCSSSCCCCCEEEGGGCCEEEECCCCSSSCCSSS
T ss_pred eEEEEEEEecCCCCCC---------CCCCceeEEEEEECCEEEEEeccCcccccccEEEEeeeEEEEeccccccCccccc
Confidence 3679999987633221 23469999999999999999655544 47889999988666555443322 2356
Q ss_pred EEEEEEEeecceeeeecccceeehhhHHHHhhcccccc
Q 028920 139 QYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLD 176 (202)
Q Consensus 139 ~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~ 176 (202)
.++|-|.|...- |.....++-..+.|+.||+.=|+-.
T Consensus 87 ~~~f~i~t~~rt-~~l~A~s~~e~~~Wi~aL~~~i~~n 123 (164)
T 2lul_A 87 KYPFQVVHDANT-LYIFAPSPQSRDLWVKKLKEEIKNN 123 (164)
T ss_dssp CSEEEEECSSCE-EEEECSSHHHHHHHHHHHHHHHTTC
T ss_pred ceeEEEecCCcE-EEEECCCHHHHHHHHHHHHHHHHHC
Confidence 789999988764 4455667888999999999777654
No 38
>2rsg_A Collagen type IV alpha-3-binding protein; pleckstrin homology, lipid transport; NMR {Homo sapiens}
Probab=98.13 E-value=5.9e-06 Score=55.19 Aligned_cols=86 Identities=19% Similarity=0.287 Sum_probs=60.3
Q ss_pred ceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecC--CCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 63 SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTD--LSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 63 SgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTD--LsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
+|||+-++.- +.-|=.||+||+|.+++||--..| ..|.+.+-|.+..-+ .+.+..+
T Consensus 4 ~G~L~K~g~~--------------~k~WkkR~FvL~~~~L~Yy~~~~~~~~~~~~~i~l~~~~~~--------~~~~~~~ 61 (94)
T 2rsg_A 4 CGVLSKWTNY--------------IHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVIT--------PHDFDEC 61 (94)
T ss_dssp EEEEEEESSS--------------TTCEEEEEEEEETTEEEEESSTTGGGTCCSEEEETTTCEEE--------ECSSCSS
T ss_pred EEEEEEeCCC--------------CCCceEEEEEEECCEEEEEEecccccccceeeEecceeeee--------cCcccce
Confidence 7999987531 356999999999999999975544 346666655543211 1223346
Q ss_pred EEEEEeecceeeeecccceeehhhHHHHhhc
Q 028920 141 CFYILTRHGLRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdsWL~al~~ 171 (202)
+|-|.|. |=.|.....++-..+.|+.||+.
T Consensus 62 ~F~i~~~-~r~~~l~A~s~~e~~~Wi~aLq~ 91 (94)
T 2rsg_A 62 RFDISVN-DSVWYLRAQDPDHRQQWIDAIEQ 91 (94)
T ss_dssp EEEEEET-TEEEEEECCSSCCTHHHHHHHHH
T ss_pred eEEEEeC-CeEEEEECCCHHHHHHHHHHHHh
Confidence 7888775 44567777788889999999974
No 39
>2coc_A FYVE, rhogef and PH domain containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.10 E-value=6.5e-06 Score=60.28 Aligned_cols=96 Identities=16% Similarity=0.135 Sum_probs=66.2
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeec---ceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCC
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHG---SCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENG 136 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G---~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdg 136 (202)
..++|||+-+.+ +.-|=.|++||.| .|+|||--..|-.|++++.|... +|-. |.- .+..
T Consensus 8 ~~~~G~L~k~~~---------------~~~WkkrWfVL~~~~~~~Ly~Yk~~~d~~p~g~I~L~g~-~V~~-~~~-~~~~ 69 (112)
T 2coc_A 8 SLLCGPLRLSES---------------GETWSEVWAAIPMSDPQVLHLQGGSQDGRLPRTIPLPSC-KLSV-PDP-EERL 69 (112)
T ss_dssp SSSEEEEEEESS---------------SSCEEEEEEECCTTCTTCEEEECCTTCSSSCSEECGGGC-EEEC-CCS-SSCC
T ss_pred ceEEEEEEecCC---------------CCCceEEEEEEECCCccEEEEECCCCccCcceEEEcCCC-EEEe-cCc-cccc
Confidence 468899998632 3469999999998 49999999999999999999443 3322 111 1223
Q ss_pred ceEEEEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 137 EMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 137 e~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
+-.|+|-|.+.+=. |.=+-.|+-+...|+.||+.=.+
T Consensus 70 ~~~~~Fki~~~~~~-y~f~A~s~e~~~~Wl~al~~A~~ 106 (112)
T 2coc_A 70 DSGHVWKLQWAKQS-WYLSASSAELQQQWLETLSTAAH 106 (112)
T ss_dssp SSSEEEEEEETTEE-EEEEESSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEecCCeE-EEEEcCCHHHHHHHHHHHHHHhc
Confidence 46799999843322 22223346678899999986433
No 40
>1x1f_A Signal-transducing adaptor protein 1; docking protein BRDG1, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.09 E-value=6.8e-06 Score=62.94 Aligned_cols=94 Identities=15% Similarity=0.240 Sum_probs=69.0
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhcc-CCCCcccCCCceEE
Q 028920 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVA-SLPSITRENGEMQY 140 (202)
Q Consensus 62 lSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg-~lP~f~rEdge~~y 140 (202)
.+|||+-+. . -+..|=.||+||+|.|+|||---.|-.|.+.+-|.+.+.+- ..|. +.-.+
T Consensus 20 keG~L~Kkg-------~-------~~k~WkrRWFvLk~~~L~Yyk~~~d~~~~g~I~L~~~~~~~~~~~~-----~~~~~ 80 (149)
T 1x1f_A 20 FEGFLLIKR-------S-------GYREYEHYWTELRGTTLFFYTDKKSIIYVDKLDIVDLTCLTEQNST-----EKNCA 80 (149)
T ss_dssp EEEEEEEEC-------T-------TCCSCEEEEEEEETTEEEEESCSSCSSCSEECCCSSCCEEEECCCT-----TSCCC
T ss_pred EEEEEEEeC-------C-------CCCCceeEEEEEcCCEEEEEeCCCccccCcEEECCCceEEeeccCC-----CCcCc
Confidence 479999874 1 24689999999999999999999999999999888876541 1121 12358
Q ss_pred EEEEEeecceeeeecccceeehhhHHHHhhccccc
Q 028920 141 CFYILTRHGLRIECSSISKIQVYSWLSALQTDCKL 175 (202)
Q Consensus 141 aFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~ 175 (202)
+|-|.|-..- |.-+..+.-..+.|+.||+.=..+
T Consensus 81 ~F~I~t~~r~-~~f~A~s~ee~~eWi~aI~~v~~~ 114 (149)
T 1x1f_A 81 KFTLVLPKEE-VQLKTENTESGEEWRGFILTVTEL 114 (149)
T ss_dssp EEEEECSSCC-EEEECSSHHHHHHHHHHHHHHHHS
T ss_pred EEEEEcCCCE-EEEEcCCHHHHHHHHHHHHHHHcc
Confidence 9999886543 333445566788999999865543
No 41
>2j59_M RHO-GTPase activating protein 10; ARF, ARF1, ARFBD, arhgap21, myristate, transport, nucleotide-binding, rhogap protein, hydrolase; HET: GTP; 2.1A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dhj_A
Probab=98.07 E-value=7.1e-06 Score=60.38 Aligned_cols=104 Identities=14% Similarity=0.346 Sum_probs=64.4
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecC--CCCCCcceeeh---hhhccCCCCcccC
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTD--LSPQDSTVLSD---VVEVASLPSITRE 134 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTD--LsPQdStllsD---IVEVg~lP~f~rE 134 (202)
....|||+.+..+.. .|.-.. .-+.-|-.||+||+|.+++||--..| -.|.+.+-|.. +|++. .+
T Consensus 3 v~~eG~L~~k~~~~~-~gkK~g---~~~k~WkkRwfvL~~~~L~yyk~~~~~~~~~~g~i~l~~~~~~~~~~------~~ 72 (168)
T 2j59_M 3 AAKEGWLHFRPLVTD-KGKRVG---GSIRPWKQMYVVLRGHSLYLYKDKREQTTPSEEEQPISVNACLIDIS------YS 72 (168)
T ss_dssp CCEEEEEEEEECC----------------CCEEEEEEEETTEEEEESCTTCC--------CEECSSCEEEEC------SS
T ss_pred CcEEEEEeeeeeccc-CCcccC---CCCCCceEEEEEEeCCEEEEEECCcccccccCCceEecccceEEEec------cc
Confidence 356899998875532 121100 13567999999999999999987654 56777766655 33332 12
Q ss_pred CCceEEEEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 135 NGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
+..-.|+|-|.|... .|.....++-..+.|+.||+.=+.
T Consensus 73 ~~~~~~~F~I~t~~r-~~~l~A~s~~e~~~Wi~ai~~~~~ 111 (168)
T 2j59_M 73 ETKRKNVFRLTTSDC-ECLFQAEDRDDMLAWIKTIQESSN 111 (168)
T ss_dssp SCSCSSEEEEECSSC-EEEEECSSHHHHHHHHHHHHHHCC
T ss_pred cCCCCCEEEEEeCCc-eEEEEcCCHHHHHHHHHHHHHHHh
Confidence 344568999998764 577777888889999999986554
No 42
>1wg7_A Dedicator of cytokinesis protein 9; pleckstrin homology domain, zizimin1, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=98.03 E-value=4.3e-06 Score=60.10 Aligned_cols=100 Identities=17% Similarity=0.272 Sum_probs=74.4
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecc-----eeEeeeeec-CCCCCCcceeehhhhccCCCCcccC
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS-----CIFFYLLST-DLSPQDSTVLSDVVEVASLPSITRE 134 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~-----ciffyL~sT-DLsPQdStllsDIVEVg~lP~f~rE 134 (202)
-.+|||+.+..=..+ -.-..-|-.||+||.|. +++||--.. |-.|.+.+-|.++..+-. +
T Consensus 19 ~~~G~L~K~~~~~~~--------~~~~k~Wk~RwfvL~~~~~g~~~L~yy~~~~~~~~~~g~I~L~~~~~~~~-~----- 84 (150)
T 1wg7_A 19 TKHGWLYKGNMNSAI--------SVTMRSFKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDSCMGVVQ-N----- 84 (150)
T ss_dssp CCEEEEEECCCCSSH--------HHHHSSCEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTTCCEECC-C-----
T ss_pred eEEEEEEEecCCccc--------cccccCeeEEEEEEecCCCCceEEEEECCCCCCCCcCcEEecccCEEEec-C-----
Confidence 468999988420000 01245899999999997 888887777 888999999988765532 1
Q ss_pred CCceEEEEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 135 NGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 135 dge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
...-.|+|-|.|..+-.|.....++-..+.|+.||+.=++
T Consensus 85 ~~~~~~~F~i~~~~~r~~~l~A~s~~e~~~Wi~al~~ai~ 124 (150)
T 1wg7_A 85 NKVRRFAFELKMQDKSSYLLAADSEVEMEEWITILNKILQ 124 (150)
T ss_dssp CSSCTTEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCCCcEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 2345689999998766777777888899999999986554
No 43
>1btk_A Bruton'S tyrosine kinase; transferase, PH domain, BTK motif, zinc binding, X-linked agammaglobulinemia, tyrosine-protein kinase; 1.60A {Homo sapiens} SCOP: b.55.1.1 PDB: 1b55_A* 2z0p_A* 1bwn_A*
Probab=98.03 E-value=4.9e-06 Score=63.73 Aligned_cols=105 Identities=16% Similarity=0.241 Sum_probs=73.9
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeee----ecCCCCCCcceeehhhhccCC-----CCcc
Q 028920 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLL----STDLSPQDSTVLSDVVEVASL-----PSIT 132 (202)
Q Consensus 62 lSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~----sTDLsPQdStllsDIVEVg~l-----P~f~ 132 (202)
.+|||+-|+.-.. -.-+..|=.||.||.+.+|+||=- ..|-.|.+++-|+++.-|..+ +.+.
T Consensus 5 keG~L~Kr~~~~~---------~~~~k~WKkRwFVL~~~~L~Yyk~~~~~~~~~~~~G~I~L~~~~~ve~~~~~~~~~~~ 75 (169)
T 1btk_A 5 LESIFLKRSQQKK---------KTSPLNFKKCLFLLTVHKLSYYEYDFERGRRGSKKGSIDVEKITCVETVVPEKNPPPE 75 (169)
T ss_dssp EEEEEEEECCCSS---------TTCCCCEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEEGGGEEEEEECCCCSSCCGG
T ss_pred EEEEEEEecCCCC---------CcccCCCceEEEEEcCCEEEEEecCCccCCCCceeeEEECcceEEEEeccCCCCcchh
Confidence 4799998853211 012367999999999999999987 578899999999997544333 2222
Q ss_pred cC----------CCceE------EEEEEEeecceeeeecccceeehhhHHHHhhcccccc
Q 028920 133 RE----------NGEMQ------YCFYILTRHGLRIECSSISKIQVYSWLSALQTDCKLD 176 (202)
Q Consensus 133 rE----------dge~~------yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k~~ 176 (202)
+. ....+ |+|-|.|... .|..+..+.-..+.|+.||+.=+...
T Consensus 76 ~~~~~~~~~~~~~~~~~i~~~~~~~F~I~t~~r-t~yl~A~s~~E~~eWi~aI~~~i~~n 134 (169)
T 1btk_A 76 RQIPRRGEESSEMEQISIIERFPYPFQVVYDEG-PLYVFSPTEELRKRWIHQLKNVIRYN 134 (169)
T ss_dssp GCC---------CCTTHHHHCCCEEEEEEETTC-CEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred cccccccCcccccccccccccccccEEEEeCCc-eEEEEcCCHHHHHHHHHHHHHHHHHC
Confidence 21 01111 8999998764 45566677788999999999776643
No 44
>2da0_A 130-kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; PH domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=5.3e-06 Score=57.76 Aligned_cols=89 Identities=15% Similarity=0.207 Sum_probs=61.6
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCccee-ehhhhccCCCCcccCCCceE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVL-SDVVEVASLPSITRENGEMQ 139 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStll-sDIVEVg~lP~f~rEdge~~ 139 (202)
..+|||+-+..- -..-|-.||+||+|.+++||---.+ .|-+.+.+ .-.|+ ...+..
T Consensus 11 ~~~G~L~K~~~~-------------~~k~WkkR~fvL~~~~L~yyk~~~~-~~~~~i~l~~~~v~---------~~~~~~ 67 (114)
T 2da0_A 11 EKKGYLLKKSDG-------------IRKVWQRRKCSVKNGILTISHATSN-RQPAKLNLLTCQVK---------PNAEDK 67 (114)
T ss_dssp CEEEEEEEECSS-------------SCCCEEEEEEEEETTEEEECCSSCC-SCCEEEETTTSEEE---------ECSSSS
T ss_pred cEEEEEEEeCCC-------------CCCCceeEEEEEeCCEEEEEcCCCC-CCCCEEEeeeeEEE---------ECCCCC
Confidence 468999998641 1257999999999999999976444 34344332 22222 122335
Q ss_pred EEEEEEeecceeeeecccceeehhhHHHHhhccc
Q 028920 140 YCFYILTRHGLRIECSSISKIQVYSWLSALQTDC 173 (202)
Q Consensus 140 yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~ 173 (202)
++|-|.|. +=.|.....++-..+.|+.||+.=.
T Consensus 68 ~~F~I~~~-~r~~~l~a~s~~e~~~Wi~al~~~~ 100 (114)
T 2da0_A 68 KSFDLISH-NRTYHFQAEDEQDYVAWISVLTNSK 100 (114)
T ss_dssp SCEEEEET-TEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred CEEEEEcC-CcEEEEEcCCHHHHHHHHHHHHHHH
Confidence 79999874 5567777778889999999998543
No 45
>2rlo_A Centaurin-gamma 1; split PH domain, alternative splicing, ANK repeat, cytoplasm, GTP-binding, GTPase activation, metal-binding, nucleotide-binding; NMR {Homo sapiens}
Probab=97.97 E-value=1.3e-05 Score=56.94 Aligned_cols=97 Identities=15% Similarity=0.261 Sum_probs=58.8
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEEeec-ceeEeeee-----------e------cCCCCCCcceeehhh
Q 028920 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHG-SCIFFYLL-----------S------TDLSPQDSTVLSDVV 123 (202)
Q Consensus 62 lSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G-~ciffyL~-----------s------TDLsPQdStllsDIV 123 (202)
.+|||+-|+ |. .-+..|=+||+||.+ ..++||-- . ++-.|.+.+.|++..
T Consensus 6 k~G~L~K~~------g~------~~~k~WkkRwFvL~~~~~l~Y~~~~~d~~~~~~~~~i~l~~~~~~~~~~~i~l~~~~ 73 (128)
T 2rlo_A 6 KQSFLLKRS------GN------SLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISA 73 (128)
T ss_dssp EEEEEEEEC------SC------STTCCEEEEEEEEETTTEEEEESSHHHHHHTCSCEEEESSSCEEECSSCCCCCSSCC
T ss_pred eEEEEEEec------CC------CccCCccEEEEEEeCCCEEEEecchhhhccccCCCeeeeeeeEEecCCCcccccccc
Confidence 479999884 21 124579999999997 45665521 1 122244433333321
Q ss_pred hccCCCC-cccCCCceEEEEEEEeecceeeeecccceeehhhHHHHhhc
Q 028920 124 EVASLPS-ITRENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 124 EVg~lP~-f~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~ 171 (202)
-+ +.++ .....++-.++|.|.|..|=.|.....++-..+.|+.||+.
T Consensus 74 ~~-~~~~~~~~~~~~~~~~F~I~t~~~r~~~l~A~s~~e~~~Wi~ai~~ 121 (128)
T 2rlo_A 74 FG-PSASGSAGQAEEENFEFLIVSSTGQTWHFEAASFEERDAWVQAIES 121 (128)
T ss_dssp CS-CCSCCCCSSCCCCCCCEEEECTTSCEEEEEESSHHHHHHHHHHHHH
T ss_pred cc-ccccccccccccCCceEEEEcCCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 11 1100 00111245789999998876677777778889999999985
No 46
>1dro_A Beta-spectrin; cytoskeleton; NMR {Drosophila melanogaster} SCOP: b.55.1.1
Probab=97.96 E-value=6.3e-06 Score=58.19 Aligned_cols=101 Identities=12% Similarity=0.269 Sum_probs=68.3
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCC--------CCcceeehhhhccCCCCcc
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSP--------QDSTVLSDVVEVASLPSIT 132 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsP--------QdStllsDIVEVg~lP~f~ 132 (202)
...|||+-+.-|.. +|..+ -...|=.||+||+|.+++||---.|..| +.++-|... .|...
T Consensus 9 ~k~G~L~rK~~~~~-~gkk~-----~~~~Wk~rw~vL~~~~L~~yk~~~~~~~~~~~~~~~~~~i~L~~~-~v~~~---- 77 (122)
T 1dro_A 9 GHEGYVTRKHEWDS-TTKKA-----SNRSWDKVYMAAKAGRISFYKDQKGYKSNPELTFRGEPSYDLQNA-AIEIA---- 77 (122)
T ss_dssp SEEEEEEEECSCCC-CCCTT-----CCCCCEEEEEEESSSCCBEESSSSHHHHCTTCCSSCCCBCCCSSC-CCEEC----
T ss_pred EEEEEEEEEEEEeC-CCccC-----CCCCccEEEEEEECCEEEEEeCCcccccCCCcccCCCceEECCCC-EEEeC----
Confidence 35799987755432 23321 3578999999999999999986655443 233333221 11111
Q ss_pred cCCCceEEEEEEEeecceeeeecccceeehhhHHHHhhcc
Q 028920 133 RENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTD 172 (202)
Q Consensus 133 rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d 172 (202)
.+..+-.++|-|.|..|-.|.-...+.-++..|+.||+.=
T Consensus 78 ~d~~kr~~~F~l~t~~~~~~lfqA~s~~e~~~Wi~ai~~~ 117 (122)
T 1dro_A 78 SDYTKKKHVLRVKLANGALFLLQAHDDTEMSQWVTSLKAQ 117 (122)
T ss_dssp CSSSSSTTEEEEECSSSCEEEEECSSSHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEEEcCCCEEEEECCCHHHHHHHHHHHHHH
Confidence 1223456899999999888887778888899999999853
No 47
>2p0d_A RHO GTPase-activating protein 9; protein-phosphoinositide complex, pleckstrin homology domain, ligand binding protein; HET: I3P; 1.81A {Homo sapiens} PDB: 2p0f_A 2p0h_A*
Probab=97.95 E-value=7.6e-06 Score=59.36 Aligned_cols=98 Identities=23% Similarity=0.343 Sum_probs=69.9
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeee-----------cCCCCCCcceeehhh-hccCC
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLS-----------TDLSPQDSTVLSDVV-EVASL 128 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~s-----------TDLsPQdStllsDIV-EVg~l 128 (202)
...|||+-...+- .|.- + ..-|=.||+||.|.+++||--. .|-.|.+.+-|.... +.
T Consensus 13 ~k~G~L~kk~~~~--~G~~--~----~k~Wk~rwfvL~~~~L~yykd~~~~~~~~~~~~~~~~p~g~I~L~~~~v~~--- 81 (129)
T 2p0d_A 13 EKSGLLNMTKIAQ--GGRK--L----RKNWGPSWVVLTGNSLVFYREPPPTAPSSGWGPAGSRPESSVDLRGAALAH--- 81 (129)
T ss_dssp EEEEEEEEEEEEE--TTEE--C----CCCCEEEEEEEESSEEEEESCC--------------CCSEEEECTTCEEEE---
T ss_pred eEEEEEEEeeecc--CCCc--C----CCCceEEEEEEeCCEEEEEcCcccccccccccccCCCCccEEEeCCcEEEE---
Confidence 4689998643221 3321 1 2689999999999999999876 467888888887643 22
Q ss_pred CCcccCCCceEEEEEEEeecceeeeecccceeehhhHHHHhhcc
Q 028920 129 PSITRENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTD 172 (202)
Q Consensus 129 P~f~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d 172 (202)
+ .+...-.++|-|.|..|=.|.=+..+.-+.+.|+.||+.=
T Consensus 82 ~---~~~~kr~~~F~l~t~~~~~yl~qA~s~~e~~~Wi~aI~~~ 122 (129)
T 2p0d_A 82 G---RHLSSRRNVLHIRTIPGHEFLLQSDHETELRAWHRALRTV 122 (129)
T ss_dssp C---TTSCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHHH
T ss_pred C---CCCCCCCcEEEEEcCCCCEEEEECCCHHHHHHHHHHHHHH
Confidence 1 2333446899999999877777777788899999999853
No 48
>1wjm_A Beta-spectrin III; PH domain, signal transduction, structural genomics, spectrin beta chain, brain 2, KIAA0302; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=97.87 E-value=1.1e-05 Score=56.47 Aligned_cols=102 Identities=16% Similarity=0.230 Sum_probs=68.2
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCC----CCC--cceeeh-hhhccCCCCccc
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLS----PQD--STVLSD-VVEVASLPSITR 133 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLs----PQd--StllsD-IVEVg~lP~f~r 133 (202)
...|||+-+..+.. +|..+ -...|=.||+||+|.+++||--..|-. |.. ++-|.. +|++ . .
T Consensus 9 ~~eG~L~kk~~~~~-~gk~~-----~~~~Wk~rwfvL~~~~L~yyk~~~~~~~~~~~~~~~~i~l~~~~~~~--~----~ 76 (123)
T 1wjm_A 9 QMEGMLCRKQEMEA-FGKKA-----ANRSWQNVYCVLRRGSLGFYKDAKAASAGVPYHGEVPVSLARAQGSV--A----F 76 (123)
T ss_dssp CEEEEEEEEEEEEE-TTEEC-----SCCCCEEEEEEEETTEEEEESSHHHHTTTCBSSSCCCEECTTCEEEE--C----T
T ss_pred EEEEEEEEEEEEeC-CCccC-----CCCCccEEEEEEECCEEEEEEcccccccCcccCCCceEEccCcEEee--c----c
Confidence 46899998876522 22221 256899999999999999997665543 222 222221 1222 1 1
Q ss_pred CCCceEEEEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 134 ENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 134 Edge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
+..+-.|+|-|.|..|-.|.-+..++-+...|+.||+.=+.
T Consensus 77 ~~~~r~~~F~i~~~~~~~~~f~A~s~~e~~~Wi~ai~~~~~ 117 (123)
T 1wjm_A 77 DYRKRKHVFKLGLQDGKEYLFQAKDEAEMSSWLRVVNAAIA 117 (123)
T ss_dssp TCSSCSSEEEEECSSSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred cccCCCCEEEEEEcCCcEEEEECCCHHHHHHHHHHHHHHHh
Confidence 22455789999998887777667778889999999986543
No 49
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=97.87 E-value=3e-05 Score=64.84 Aligned_cols=96 Identities=20% Similarity=0.302 Sum_probs=61.1
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
..+||||-|+.-. + --..|-.||+||+|.|++||-. .|..|.+.+-|.... |-. .++.+-+|
T Consensus 279 ~k~G~L~K~~~~~-------~----~~~~WkkRwfvL~~~~L~y~k~-~~~~~~~~i~l~~~~-v~~-----~~~~~r~~ 340 (385)
T 2q13_A 279 RKAGYLNARNKTG-------L----VSSTWDRQFYFTQGGNLMSQAR-GDVAGGLAMDIDNCS-VMA-----VDCEDRRY 340 (385)
T ss_dssp CCEEEEEEC-------------------CCEEEEEEEETTEEEEECS-SCSSCEEEEECTTCE-EEE-----ECCTTCSS
T ss_pred cEEEEEEEecCCC-------C----CcCCceeEEEEEECCEEEEecC-CCcCCCceEEccceE-EEe-----ccccCCCc
Confidence 4579999875321 0 0126999999999999987766 666665444332210 101 12346679
Q ss_pred EEEEEeecc-eeeeecccceeehhhHHHHhhcccc
Q 028920 141 CFYILTRHG-LRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 141 aFyIlTrhG-LR~ECSS~skiQVdsWL~al~~d~k 174 (202)
+|-|.|..| -.|.-.-.++-..+.|+.||+.=..
T Consensus 341 ~F~i~t~~~~~~~~l~A~s~~e~~~Wi~ai~~~~~ 375 (385)
T 2q13_A 341 CFQITSFDGKKSSILQAESKKDHEEWICTINNISK 375 (385)
T ss_dssp EEEEECTTSCBCCCEECSSHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCCCCeEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 999999876 4455555667778999999986433
No 50
>2r09_A Cytohesin-3; autoinhibition, GRP1, PIP3, ARF, 3-phosphoinositide, pleckst homology domain, guanine-nucleotide releasing factor, signa protein; HET: 4IP PGE PE5; 1.90A {Mus musculus} SCOP: a.118.3.1 b.55.1.1 PDB: 2r0d_A*
Probab=97.80 E-value=2.1e-05 Score=66.32 Aligned_cols=93 Identities=17% Similarity=0.432 Sum_probs=71.1
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEE
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQY 140 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~y 140 (202)
..+|||+-+.. -+.-|=.||+||.|.|++||--..|-.|.+.+-|.++. |-..+ +..-.+
T Consensus 214 ~k~G~L~K~g~--------------~~k~WkkRwFVL~~~~L~Yyk~~~~~~p~G~I~L~~~~-v~~~~-----~~~~~~ 273 (347)
T 2r09_A 214 DREGWLLKLGG--------------RVKTWKRRWFILTDNCLYYFEYTTDKEPRGIIPLENLS-IREVE-----DPRKPN 273 (347)
T ss_dssp CEEEEEEEECS--------------SSCCEEEEEEEEETTEEEEESSTTCSSCSEEEECTTCE-EEEEC-----CSSCSS
T ss_pred ccCCeeEecCC--------------CcccceeEEEEEcCCEEEEEcCCCccCCcEEEEcCCeE-EEEcc-----CCCCCC
Confidence 57899987732 15789999999999999999888889999999998764 33222 334568
Q ss_pred EEEEEeecc---------------------eeeeecccceeehhhHHHHhhccc
Q 028920 141 CFYILTRHG---------------------LRIECSSISKIQVYSWLSALQTDC 173 (202)
Q Consensus 141 aFyIlTrhG---------------------LR~ECSS~skiQVdsWL~al~~d~ 173 (202)
+|-|.|..+ =.|..+..++-+.+.|+.||+.=+
T Consensus 274 ~F~I~~~~~~~~~~~~~k~~~~g~~v~~~~r~y~l~A~s~ee~~~Wi~aI~~ai 327 (347)
T 2r09_A 274 CFELYNPSHKGQVIKACKTEADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI 327 (347)
T ss_dssp EEEEECSSSTTCCCCCEEECTTSCEEECCCSCEEEECSSHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCccccccccccccccccccccCceEEEEECCCHHHHHHHHHHHHHHH
Confidence 999987632 345566677788999999998644
No 51
>3pp2_A RHO GTPase-activating protein 27; PH domain, GTPase activator, pleckstrin homology domain, STR genomics consortium, SGC, hydrolase activator; HET: CIT; 1.42A {Homo sapiens}
Probab=97.79 E-value=2.8e-05 Score=56.00 Aligned_cols=100 Identities=17% Similarity=0.288 Sum_probs=67.4
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCC------------CCCcceeehhhhccCC
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLS------------PQDSTVLSDVVEVASL 128 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLs------------PQdStllsDIVEVg~l 128 (202)
.-.|||+-+.-+.. |--+ -.--|-+||+||+|.+++||--..+.+ |...+-|.. .-|...
T Consensus 9 ~keG~L~rK~~~~~--gkk~-----~~r~W~~~w~VL~~~~L~~yKd~~~~~~~~~~~~~~~~~~~~~i~L~~-a~v~~~ 80 (124)
T 3pp2_A 9 DKAGVLHRTKTADK--GKRL-----RKKHWSASWTVLEGGVLTFFKDSKTSAAGGLRQPSKFSTPEYTVELRG-ATLSWA 80 (124)
T ss_dssp CEEEEEEEEEEEET--TEEC-----SSCCCEEEEEEEETTEEEEESCSBCC---CBCCGGGGCSEEEEEECTT-CEEEEC
T ss_pred EEEEEEEEEEeccC--CccC-----CCCCceEEEEEEECCEEEEEecCccccccCccCcccccCCcceEEcCC-CEEEec
Confidence 45799998775533 5442 345899999999999999997555543 333333322 112222
Q ss_pred CCcccCCCceEEEEEEEeecceeeeecccceeehhhHHHHhhc
Q 028920 129 PSITRENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 129 P~f~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~ 171 (202)
| .+...-.+.|-|.|..|-.|.=+..++-+..+|+.+|+.
T Consensus 81 ~---~d~~krk~vF~l~t~~~~~ylfqA~s~~e~~~Wi~aI~~ 120 (124)
T 3pp2_A 81 P---KDKSSRKNVLELRSRDGSEYLIQHDSEAIISTWHKAIAQ 120 (124)
T ss_dssp C---GGGCSSSSEEEEECTTSCEEEEECSCHHHHHHHHHHHHH
T ss_pred c---cccCCCceEEEEECCCCCEEEEECCCHHHHHHHHHHHHH
Confidence 2 122234689999998888887777788889999999985
No 52
>3a8p_A T-lymphoma invasion and metastasis-inducing protein 2; guanine nucleotide exchange factor, alternative splicing, cell projection, coiled coil; 2.10A {Mus musculus} PDB: 3a8q_A
Probab=97.78 E-value=1.8e-05 Score=65.05 Aligned_cols=106 Identities=18% Similarity=0.400 Sum_probs=72.2
Q ss_pred hhcceeEEEeeecccC-CCCCCCCCCCCccccceeeEEeecceeEeeee------ecCCCCCCcceeehh-hhccCCCCc
Q 028920 60 ARLSGYLYIRTRWKPL-PGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLL------STDLSPQDSTVLSDV-VEVASLPSI 131 (202)
Q Consensus 60 arlSgYLyiRtRW~aL-pgEpppiDDtdVDDWlpRFVVl~G~ciffyL~------sTDLsPQdStllsDI-VEVg~lP~f 131 (202)
..-+|||+.+..++-. -|.-|+. -+..|=.||+||.|.+++||-- ..|-.|.+.+-|.+. |+. ++
T Consensus 11 v~K~G~L~~k~~~~~~K~g~~~~~---~~K~WkrRWfVL~~~~L~yyK~~~~~~~~~~~~p~g~I~L~~~~v~~--~~-- 83 (263)
T 3a8p_A 11 VRKAGWLFFKPLVTLQKERKLELV---ARRKWKQYWVTLKGCTLLFYETYGKNSTEQNSAPRCALFAEDSIVQS--VP-- 83 (263)
T ss_dssp EEEEEEEEEEEEEEEEGGGEEEEC---TTCCCEEEEEEEETTEEEEESSCCC------CCCSEEEECTTCEEEE--CT--
T ss_pred eEEEEEeeecccccccCCCCccCc---cCCCceEEEEEEcCCEEEEEecCcccccccccCccceEEcCCcEEEE--CC--
Confidence 4568999976655211 1211111 1457999999999999999986 256788888777532 221 22
Q ss_pred ccCCCceEEEEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 132 TRENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 132 ~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
++.+-.|+|-|.|..|-.|.-+..+.-..+.|+.||+.=+.
T Consensus 84 --~~~kk~~~F~I~t~~~r~y~f~A~s~ee~~~Wi~aI~~a~~ 124 (263)
T 3a8p_A 84 --EHPKKEHVFCLSNSCGDVYLFQATSQTDLENWVTAIHSACA 124 (263)
T ss_dssp --TCSSCSSEEEEECTTSCEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred --cCCCCCCEEEEEcCCCcEEEEEcCCHHHHHHHHHHHHHHHH
Confidence 23334799999998887888888888999999999986554
No 53
>1qqg_A IRS-1, insulin receptor substrate 1; beta-sandwhich, signal transduction; 2.30A {Homo sapiens} SCOP: b.55.1.2 b.55.1.2 PDB: 1irs_A*
Probab=97.65 E-value=2.5e-05 Score=64.36 Aligned_cols=91 Identities=21% Similarity=0.275 Sum_probs=70.6
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecc-------eeEeeeeecC-----CCCCCcceeehhhhccC
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS-------CIFFYLLSTD-----LSPQDSTVLSDVVEVAS 127 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~-------ciffyL~sTD-----LsPQdStllsDIVEVg~ 127 (202)
...+|||+-+ .-|=.||.||.+. +++||=--.| -.|.+++-|+++..|..
T Consensus 10 v~k~G~L~K~------------------K~WkkRwFVL~~~~~~G~~~~L~YYk~~~~~~~~~~~p~g~I~L~~~~~V~~ 71 (264)
T 1qqg_A 10 VRKVGYLRKP------------------KSMHKRFFVLRAASEAGGPARLEYYENEKKWRHKSSAPKRSIPLESCFNINK 71 (264)
T ss_dssp EEEEEEEECT------------------TTCCEEEEEEECCBTTTBSSEEEEESSHHHHHTTCSCCSEEEEGGGEEEEEE
T ss_pred ccEEEEEEEC------------------CCCEeEEEEEECCCCCCCCCEEEEECCCccccccccCcceEEEeeceEEEEe
Confidence 4578999876 3799999999998 8999977777 68999999999987755
Q ss_pred CCCcccCCCceEEEEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 128 LPSITRENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 128 lP~f~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
.+ +..-.|+|-|.|.. =.|.....++-..+.|+.+|+.=+.
T Consensus 72 ~~-----~~~~~~~F~I~t~~-rty~l~A~se~e~~~Wi~aL~~~~~ 112 (264)
T 1qqg_A 72 RA-----DSKNKHLVALYTRD-EHFAIAADSEAEQDSWYQALLQLHN 112 (264)
T ss_dssp EC-----CSSCSSEEEEEESS-CEEEEECSSHHHHHHHHHHHHHHC-
T ss_pred cc-----CCCCCcEEEEEECC-EEEEEEeCCHHHHHHHHHHHHHHHH
Confidence 44 24456899999884 3455555667789999999986443
No 54
>4a6h_A Phosphatidylinositol 4,5-bisphosphate-binding Pro SLM1; signaling protein; HET: I4C; 1.45A {Saccharomyces cerevisiae} PDB: 3nsu_A* 4a6f_A* 4a6k_A* 4a6f_B* 4a5k_A
Probab=97.63 E-value=0.00011 Score=54.20 Aligned_cols=96 Identities=22% Similarity=0.314 Sum_probs=64.3
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeec---CCCCCCcceeehhhhccCCCCcccCCC-
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLST---DLSPQDSTVLSDVVEVASLPSITRENG- 136 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sT---DLsPQdStllsDIVEVg~lP~f~rEdg- 136 (202)
-.+|||+-|++- +--|=+||.||.+.|++||--.. |-.|++++.|.+.+ |+..+ .+++
T Consensus 7 ~k~G~L~Kk~~~--------------~k~W~~rwfVL~~~~L~yyK~~~~~~d~~P~gsI~L~~c~-v~~~~---~~~~~ 68 (120)
T 4a6h_A 7 IKSGFLERRSKF--------------LKSYSKGYYVLTPNFLHEFKTADRKKDLVPVMSLALSECT-VTEHS---RKNST 68 (120)
T ss_dssp SEEEEEEEEETT--------------TTEEEEEEEEECSSEEEEESSCCTTTCCSCSEEEEGGGEE-EEEEC---CCCC-
T ss_pred cEEEEEEEcCCC--------------CCCCccEEEEEeCCEEEEEcCCCcCcCCCceEEEECCCCE-EEEcc---ccccc
Confidence 357999999852 35799999999999999997653 88899999997642 22211 2222
Q ss_pred ------ceEEEEEEEeec-c-----eeeeecccceeehhhHHHHhhcccc
Q 028920 137 ------EMQYCFYILTRH-G-----LRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 137 ------e~~yaFyIlTrh-G-----LR~ECSS~skiQVdsWL~al~~d~k 174 (202)
...+.|.|.+.+ | -.|.=.-.|.-+...|+.||+.=.+
T Consensus 69 ~~~~~~~~~~~F~i~~~~~~~~~~~~~y~f~A~s~~e~~~Wv~aI~~~~~ 118 (120)
T 4a6h_A 69 SSPNSTGSDAKFVLHAKQNGIIRRGHNWVFKADSYESMMSWFDNLKILTS 118 (120)
T ss_dssp --------CCEEEEEESSSSSSCTTCEEEEECSSHHHHHHHHHHHHHHCC
T ss_pred ccccccCCCcEEEEEeCCCCcccCceEEEEEcCCHHHHHHHHHHHHHHhc
Confidence 145677777665 2 1333333445667899999986544
No 55
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=97.63 E-value=4.2e-05 Score=60.58 Aligned_cols=79 Identities=14% Similarity=0.235 Sum_probs=64.2
Q ss_pred cccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEEEEEEEeecceeeeecccceeehhhHHH
Q 028920 88 DDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQYCFYILTRHGLRIECSSISKIQVYSWLS 167 (202)
Q Consensus 88 DDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~ 167 (202)
..|-.||.||.|.+++||--..|-.|.+++-|+++..|-... .-.++|-|.|. +=.|.....++-..+.|+.
T Consensus 77 k~WkkRwfvL~~~~L~Yyk~~~~~~~~g~I~L~~~~~v~~~~-------~k~~~F~I~t~-~r~~~l~A~s~~e~~~Wv~ 148 (228)
T 3tfm_A 77 RNWKKRWFVLRQSKLMYFENDSEEKLKGTVEVRSAKEIIDNT-------NKENGIDIIMA-DRTFHLIAESPEDASQWFS 148 (228)
T ss_dssp GGCEEEEEEECSSEEEEESSTTCCSEEEEEEGGGCSEEEEET-------TTTSEEEEECS-SCEEEEECSSHHHHHHHHH
T ss_pred CCceEEEEEEeCCEEEEEeCCCCcceeEEEEcCCCEEeccCC-------CCCcEEEEEcC-CcEEEEEcCCHHHHHHHHH
Confidence 789999999999999999988888999999999987654321 23589999885 4456666777888999999
Q ss_pred Hhhcccc
Q 028920 168 ALQTDCK 174 (202)
Q Consensus 168 al~~d~k 174 (202)
||+.=++
T Consensus 149 aL~~~i~ 155 (228)
T 3tfm_A 149 VLSQVHS 155 (228)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9987665
No 56
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=97.63 E-value=6.4e-05 Score=64.68 Aligned_cols=97 Identities=11% Similarity=0.209 Sum_probs=71.3
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhc----cCCCCcccCCCc
Q 028920 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEV----ASLPSITRENGE 137 (202)
Q Consensus 62 lSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEV----g~lP~f~rEdge 137 (202)
-+|||+-+..- -...|=.||.||.|.+++||--..|-.|.+++.|..+..+ ..+|.-.... .
T Consensus 271 k~G~L~K~g~~-------------~~k~WKkRwFVL~~~~L~YYk~~~d~~~~G~I~L~~~~~~~~v~~~~~~~~~~~-~ 336 (386)
T 3lju_X 271 KEGYMEKTGPK-------------QTEGFRKRWFTMDDRRLMYFKDPLDAFARGEVFIGSKESGYTVLHGFPPSTQGH-H 336 (386)
T ss_dssp EEEEEEECCTT-------------SCSCCEEEEEEEETTEEEEESSTTCSBCSEEEECCCGGGTCEEEESCCTTCCSC-C
T ss_pred eeeeEEEECCC-------------CCCCCcccEEEEECCEEEEEecCCCcccceEEEeecceeeeeecccCCcccccc-C
Confidence 47999875421 1257999999999999999999999999999999887665 2233322111 1
Q ss_pred eEEEEEEEeecceeeeecccceeehhhHHHHhhccc
Q 028920 138 MQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDC 173 (202)
Q Consensus 138 ~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~ 173 (202)
-.|+|-|.|.. =.|.....++-..+.|+.||+.=+
T Consensus 337 ~~~~F~I~t~~-rty~l~A~s~~e~~~Wi~aL~~~i 371 (386)
T 3lju_X 337 WPHGITIVTPD-RKFLFACETESDQREWVAAFQKAV 371 (386)
T ss_dssp SCEEEEEECSS-CEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEeCC-eEEEEEcCCHHHHHHHHHHHHHHH
Confidence 25999999875 455555667778899999998643
No 57
>2rov_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=97.53 E-value=4.9e-05 Score=55.82 Aligned_cols=85 Identities=18% Similarity=0.324 Sum_probs=63.8
Q ss_pred ccceeeEEeecceeEeeeeecCC---CCCCcceeehhhhccCCCC---cccCCCceEEEEEEEeec-----ceeeeeccc
Q 028920 89 DWLPRFIVLHGSCIFFYLLSTDL---SPQDSTVLSDVVEVASLPS---ITRENGEMQYCFYILTRH-----GLRIECSSI 157 (202)
Q Consensus 89 DWlpRFVVl~G~ciffyL~sTDL---sPQdStllsDIVEVg~lP~---f~rEdge~~yaFyIlTrh-----GLR~ECSS~ 157 (202)
.|-.||+||.|..||||-.-.|= .|-..+-|+.++.|.++.. ......+..+.|-|++.. +-.+.+...
T Consensus 19 ~Wkkr~~vL~~~kL~~y~~~~~~~~~~p~~~Idl~~~~~V~~V~~~d~i~~~~~~~p~iF~I~~~~~~~~~~~~l~l~A~ 98 (117)
T 2rov_A 19 GWVKKYVIVSSKKILFYDSEQDKEQSNPYMVLDIDKLFHVRPVTQTDVYRADAKEIPRIFQILYANEGISSAKNLLLLAN 98 (117)
T ss_dssp CCCEEEEEEETTEEEEESCHHHHHTTCCSEEECGGGEEEEEECCTTTCSSSCTTTGGGEEEEEECSSSSTTCEEEEEECS
T ss_pred CcEEEEEEEECCEEEEEECCCCcccCCceEEEECcccEEEEEcccccccccccccCCcEEEEEeCCCCCCCCcEEEEEeC
Confidence 59999999999999999865543 6778887777777666644 333344567899998743 356777778
Q ss_pred ceeehhhHHHHhhccc
Q 028920 158 SKIQVYSWLSALQTDC 173 (202)
Q Consensus 158 skiQVdsWL~al~~d~ 173 (202)
|.-....|+.||+.=+
T Consensus 99 s~~e~~~WV~aL~~~i 114 (117)
T 2rov_A 99 STEEQQKWVSRLVKKI 114 (117)
T ss_dssp SHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHh
Confidence 8888999999998533
No 58
>3lju_X ARF-GAP with dual PH domain-containing protein 1; structural genomics consortium, GTPase activation, SGC, binding, nucleus, phosphoprotein; HET: IP9; 1.70A {Homo sapiens} PDB: 3feh_A* 3fm8_C 3mdb_C*
Probab=97.34 E-value=6.6e-05 Score=64.59 Aligned_cols=113 Identities=17% Similarity=0.231 Sum_probs=74.1
Q ss_pred HHHHHHHHHhhhhH-------HHHHhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEe--ecceeEeeeeecC
Q 028920 40 EDREAHLKAQLEHV-------DEILRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVL--HGSCIFFYLLSTD 110 (202)
Q Consensus 40 eEREa~lkAqLehv-------DEvLRsarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl--~G~ciffyL~sTD 110 (202)
.+||+-.+|.-+.- .....++--+|||+-|.+- +--|-.||.|| +|.|++||-.-.|
T Consensus 119 ~~~e~fIr~KY~~~~f~~~~~~~~~~~~~keG~L~KrG~~--------------~k~WkrRwFVL~~~~~~L~Yy~~~~~ 184 (386)
T 3lju_X 119 LLREQWIRAKYERQEFIYPEKQEPYSAGYREGFLWKRGRD--------------NGQFLSRKFVLTEREGALKYFNRNDA 184 (386)
T ss_dssp HHHHHHHHHHHTSCTTTSGGGGHHHHSSEEEEEEEEECSS--------------SCCEEEEEEEEETTTTEEEEEC----
T ss_pred HHHHHEHHhhhCCCEEECCccCccccccccccceeeeccc--------------cCCceEEEEEEEcCCCEEEEECCCCc
Confidence 35666666654431 2334567789999999642 46899999999 9999999999999
Q ss_pred CCCCCcceeehhhhccCCCCcccCCCceEEEEEEE---eecceeeeecccceeehhhHHHHhhc
Q 028920 111 LSPQDSTVLSDVVEVASLPSITRENGEMQYCFYIL---TRHGLRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 111 LsPQdStllsDIVEVg~lP~f~rEdge~~yaFyIl---TrhGLR~ECSS~skiQVdsWL~al~~ 171 (202)
-.|.+.+.|+++..+-. | +.....++|-|. +..+-.|.-+..+...++.|+.||+.
T Consensus 185 ~~p~g~I~L~~~~~~~~-~----~~~~~~~~f~I~~~~~~~~R~y~l~A~s~~e~~~Wi~aIr~ 243 (386)
T 3lju_X 185 KEPKAVMKIEHLNATFQ-P----AKIGHPHGLQVTYLKDNSTRNIFIYHEDGKEIVDWFNALRA 243 (386)
T ss_dssp -CCSEEEEGGGEEEEEC-H----HHHTSTTCEEEEEEETTEEEEEEEECSSHHHHHHHHHHHHH
T ss_pred cCcccEEEeeccEEEEc-c----cccCCCceEEEEEecCCCceEEEEEcCCHHHHHHHHHhhhh
Confidence 99999999999644331 1 111123445443 33345566667777889999999974
No 59
>4gmv_A RAS-associated and pleckstrin homology domains-CO protein 1; RA-PH, coiled-coil region, RAS-association domain, pleckstri homology domain; 2.40A {Homo sapiens} PDB: 4gn1_A
Probab=96.76 E-value=0.0013 Score=55.91 Aligned_cols=96 Identities=15% Similarity=0.370 Sum_probs=60.7
Q ss_pred hcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhh--ccCCCCccc-CCCc
Q 028920 61 RLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVE--VASLPSITR-ENGE 137 (202)
Q Consensus 61 rlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVE--Vg~lP~f~r-Edge 137 (202)
-+.||||.|.... .-|=-||+||+|+|+|||=..++=.|-|.+.+.++-. |=...+.+. -.--
T Consensus 159 e~~G~L~~k~~~~--------------k~WkkRyfvLr~sgLyy~~K~~sk~~r~l~~l~~L~~~~VY~~~~~kkk~kaP 224 (281)
T 4gmv_A 159 EIEGVLWLKDDGK--------------KSWKKRYFLLRASGIYYVPKGKAKVSRDLVCFLQLDHVNVYYGQDYRNKYKAP 224 (281)
T ss_dssp CCEEEEEEECTTS--------------SCEEEEEEEECSSCEEEC---------CCEEEECGGGCEEEEESSHHHHTCCS
T ss_pred ccEEEEEEECCCC--------------CCCeEEEEEEeCCEEEEEeCCCCCccccceEEEEcCCcEEEEecccccccCCC
Confidence 3799999996422 3799999999999999999988766766665544332 111112222 2336
Q ss_pred eEEEEEEE------eecceeeeecccceeehhhHHHHhhc
Q 028920 138 MQYCFYIL------TRHGLRIECSSISKIQVYSWLSALQT 171 (202)
Q Consensus 138 ~~yaFyIl------TrhGLR~ECSS~skiQVdsWL~al~~ 171 (202)
+.|+|=|- +.+++.|-|...-. .-++|++||+.
T Consensus 225 t~~~F~ik~~~~~~~~~~~~~~caede~-~~~~Wv~Air~ 263 (281)
T 4gmv_A 225 TDYCLVLKHPQIQKKSQYIKYLCCDDVR-TLHQWVNGIRI 263 (281)
T ss_dssp CSCEEEEECTTCCSCCTTCEEEECSSHH-HHHHHHHHHHH
T ss_pred CCcEEEEecCccCCCCCceEEEEeCCHH-HHHHHHHHHHH
Confidence 78899887 35789999987654 45799999973
No 60
>1dyn_A Dynamin; signal transduction protein; 2.20A {Homo sapiens} SCOP: b.55.1.1 PDB: 2dyn_A 3zys_C 2ys1_A
Probab=96.37 E-value=0.0033 Score=49.11 Aligned_cols=80 Identities=11% Similarity=0.206 Sum_probs=58.6
Q ss_pred ccc-cceeeEEeecceeEeeeeecCCCCCCcceeehh--hhccCCCCcccCCCceEEEEEEEeecc-------eeeeecc
Q 028920 87 VDD-WLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDV--VEVASLPSITRENGEMQYCFYILTRHG-------LRIECSS 156 (202)
Q Consensus 87 VDD-WlpRFVVl~G~ciffyL~sTDLsPQdStllsDI--VEVg~lP~f~rEdge~~yaFyIlTrhG-------LR~ECSS 156 (202)
|-- |=.||.||.+.|+|||=-.+|=.|++++.|..+ .||. |++. .-.|+|=|.+--| =.|+=|.
T Consensus 26 ~k~~wk~rWFVLt~~~L~yyKd~~eke~~G~IpL~~~~vr~v~--~~~~----~rk~~F~l~~~d~r~v~~~h~~y~LsA 99 (125)
T 1dyn_A 26 MKGGSKEYWFVLTAENLSWYKDDEEKEKKYMLSVDNLKLRDVE--KGFM----SSKHIFALFNTEQRNVYKDYRQLELAC 99 (125)
T ss_dssp GGTSSEEEEEEEESSEEEEESSTTCSCEEEEEECTTEEEEECC--SCSS----SSCEEEEEEETTSSCSSTTCSSEEEEE
T ss_pred ccCCceeeEEEEeccceeeecCCcccccceEEECCCceEeccC--CCCC----CCceEEEEECCCCccccccceEEEEeC
Confidence 554 899999999999999999999999999988654 3443 2222 2468888876322 2455555
Q ss_pred cceeehhhHHHHh-hcc
Q 028920 157 ISKIQVYSWLSAL-QTD 172 (202)
Q Consensus 157 ~skiQVdsWL~al-~~d 172 (202)
.+.-.+++|.+++ ++-
T Consensus 100 ~t~ee~~~Wi~s~~ra~ 116 (125)
T 1dyn_A 100 ETQEEVDSWKASFLRAG 116 (125)
T ss_dssp SSHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhCc
Confidence 5566789999999 664
No 61
>3a8n_A TIAM-1, T-lymphoma invasion and metastasis-inducing protein 1; guanine nucleotide exchange factor, guanine-nucleotide releasing factor, lipoprotein; 4.50A {Mus musculus}
Probab=96.36 E-value=0.0023 Score=54.44 Aligned_cols=107 Identities=16% Similarity=0.375 Sum_probs=74.0
Q ss_pred hhcceeEEEeeecccCCCC-CCCCCCCCccccceeeEEeecceeEeeeeec------CCCCCCcceeehhhhccCCCCcc
Q 028920 60 ARLSGYLYIRTRWKPLPGE-PPPIDDTDVDDWLPRFIVLHGSCIFFYLLST------DLSPQDSTVLSDVVEVASLPSIT 132 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgE-pppiDDtdVDDWlpRFVVl~G~ciffyL~sT------DLsPQdStllsDIVEVg~lP~f~ 132 (202)
....|||+-++-|..-.+- +-+ .-.--|=.||+||+|.++|||---. +..|..++.|..-+-. ..
T Consensus 11 v~k~G~L~rK~~l~~~k~~K~~~---~~~r~Wkk~w~VLkg~~L~fYKde~~~~~~~~~~p~~~I~L~ga~v~-~a---- 82 (279)
T 3a8n_A 11 VRKAGALAVKNFLVHKKNKKVES---ATRRKWKHYWVSLKGCTLFFYETDGRSGIDHNSVPKHAVWVENSIVQ-AV---- 82 (279)
T ss_dssp CSCEEEEEEEEEEEEETTTEEEC---CCCCCCEEEEEEEETTEECCBCCC--------CCCSSCCBCCSCEEC-CC----
T ss_pred eeEEEEEEEEEEecccCCcccCC---ccCCCCeEEEEEEeCCEEEEEecccccccccccCCCceEeccCcEEE-ec----
Confidence 3567999988877543221 100 1245799999999999999997433 3457777766543322 11
Q ss_pred cCCCceEEEEEEEeecceeeeecccceeehhhHHHHhhcccc
Q 028920 133 RENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSALQTDCK 174 (202)
Q Consensus 133 rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~k 174 (202)
.++..-.++|.|.|..|=.|-=...+.-.+.+|+.+|+.=+.
T Consensus 83 ~d~~kKk~vF~L~t~~g~~yLFQA~s~eEm~~WI~aI~~a~~ 124 (279)
T 3a8n_A 83 PEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITAIHSACA 124 (279)
T ss_dssp TTSSSSCSCCCEEETTTEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcEEEEEcCCCCEEEEeCCCHHHHHHHHHHHHHHHh
Confidence 234444589999999998888778888899999999986554
No 62
>3hk0_A Growth factor receptor-bound protein 10; GRB10, RA, PH, RAS-associating, pleckstrin-homology, adapter phosphoprotein, SH2 domain; 2.60A {Homo sapiens}
Probab=96.11 E-value=0.01 Score=49.69 Aligned_cols=96 Identities=18% Similarity=0.359 Sum_probs=60.9
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCC--CCc-ccCCC
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASL--PSI-TRENG 136 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~l--P~f-~rEdg 136 (202)
..+.||||.|.. + -.-|=-||+||+++|+|||=..++=.|-+-..+.++-+...- .+. +.-.-
T Consensus 132 P~~~G~L~~ke~-------~-------~K~WkkRyfvLr~sgLy~~~k~~sk~~r~l~~~~~L~~~~vy~~~~~kKk~ka 197 (256)
T 3hk0_A 132 PEIQGFLHVKEL-------G-------KKSWKKLYVCLRRSGLYCSTKGTSAAPRHLQLLADLEDSNIFSLIAGRKQYNA 197 (256)
T ss_dssp EEEEEEEEEECT-------T-------SSCEEEEEEEEETTEEEEESSTTCCCGGGEEEEECCTTEEEEEESSTHHHHCC
T ss_pred CcceeEEEEecC-------C-------CCcceEEEEEEeCCEEEEEecCCCCccccceEEEEcCCCEEEEecccccccCC
Confidence 346799999832 2 268999999999999998887775444443333332222110 011 11122
Q ss_pred ceEEEEEEE------eecceeeeecccceeehhhHHHHhh
Q 028920 137 EMQYCFYIL------TRHGLRIECSSISKIQVYSWLSALQ 170 (202)
Q Consensus 137 e~~yaFyIl------TrhGLR~ECSS~skiQVdsWL~al~ 170 (202)
-+.|+|=|- +.|.+.|-|..... ..+.|++||+
T Consensus 198 Pt~~~F~ik~~k~~~~~~~~~~lcaede~-~~~~W~~aIr 236 (256)
T 3hk0_A 198 PTDHGLCIKPNKVRNETKELRLLCAEDEQ-TRTSWMTAFR 236 (256)
T ss_dssp SSSEEEEEEETTCSSCCTTCEEEEESSHH-HHHHHHHHHH
T ss_pred CCCCEEEEEcccccCCCceEEEEEeCCHH-HHHHHHHHHH
Confidence 357899887 33557888876544 4589999997
No 63
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=93.38 E-value=0.1 Score=42.93 Aligned_cols=94 Identities=18% Similarity=0.236 Sum_probs=56.0
Q ss_pred ceeEEEeeecccCCCCCCCCCCCCccccceeeEEee-cceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEEE
Q 028920 63 SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLH-GSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQYC 141 (202)
Q Consensus 63 SgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~-G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~ya 141 (202)
+|||.-++ +- +.-|=+||.||+ +.+++||=--+|-.|.+.+-|..+-.++..+ ...+..-.++
T Consensus 9 eG~L~K~g-------~~-------~k~Wk~r~fvL~~~~~l~yyk~~~~~~~~~~i~l~~~~~~~~~~--~~~~~~~~~~ 72 (446)
T 4ejn_A 9 EGWLHKRG-------EY-------IKTWRPRYFLLKNDGTFIGYKERPQDVDQREAPLNNFSVAQCQL--MKTERPRPNT 72 (446)
T ss_dssp EEEEEEEE-------TT-------TTEEEEEEEEEETTSBEEEESSCC-------CCCGGGBCTTCEE--EEECSSSTTE
T ss_pred EeeEEeec-------cc-------cccccceEEEEeeCCEEEEEecCCCCCccCcccccCccccceee--cCCCCCCCce
Confidence 69998773 22 356999999997 8999999877777777777776643332111 1112222357
Q ss_pred EEEEeecceee---eecccceeehhhHHHHhhcc
Q 028920 142 FYILTRHGLRI---ECSSISKIQVYSWLSALQTD 172 (202)
Q Consensus 142 FyIlTrhGLR~---ECSS~skiQVdsWL~al~~d 172 (202)
|.|.+..+-++ .|.-.+.-..+.|..||+.-
T Consensus 73 f~I~~~~~~~~~~r~~~~~~~ee~e~W~~ai~~~ 106 (446)
T 4ejn_A 73 FIIRCLQWTTVIERTFHVETPEEREEWTTAIQTV 106 (446)
T ss_dssp EEEEEEETTEEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred eEEEcCCCceeeeeEEecCCHHHHHHHHHHHHhh
Confidence 88876554443 34445556778999999854
No 64
>2ys3_A UNC-112-related protein 2; PH domain, kindlin-3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.62 E-value=0.18 Score=39.75 Aligned_cols=81 Identities=16% Similarity=0.452 Sum_probs=57.6
Q ss_pred ccccceeeEEeecceeEeeeeecCC--CCCCcceeehhhhccCCCCcccCCCceEEEEEEE--eeccee---eeecccce
Q 028920 87 VDDWLPRFIVLHGSCIFFYLLSTDL--SPQDSTVLSDVVEVASLPSITRENGEMQYCFYIL--TRHGLR---IECSSISK 159 (202)
Q Consensus 87 VDDWlpRFVVl~G~ciffyL~sTDL--sPQdStllsDIVEVg~lP~f~rEdge~~yaFyIl--TrhGLR---~ECSS~sk 159 (202)
..-|=.||+||.|..||||=.-.|- .|-+.+.|.. .||-+-+|.. +-.|+|-++ +-+|.| +.|. ++
T Consensus 25 lK~~KrrWFvlk~~~L~YyK~kee~~~ePig~I~L~g-ceV~pd~~~~----~~kf~ikl~iPs~~g~r~y~l~cd--sE 97 (137)
T 2ys3_A 25 LKGYRQHWVVFKETTLSYYKSQDEAPGDPIQQLNLKG-CEVVPDVNVS----GQKFCIKLLVPSPEGMSEIYLRCQ--DE 97 (137)
T ss_dssp SSSSCCCEEEECSSCEEEESSTTTTTSCCSCCBCTTT-CEEEECCBGG----GTBEEEEEEEECSSSEEEEEEEES--SH
T ss_pred cccceeEEEEEeCCEEEEECCchhccCCCceEEECCC-CEEecccccc----CCceEEEEEccCCCCceEEEEECC--CH
Confidence 4468899999999999888555554 6888888877 5565555552 346666555 345644 6676 57
Q ss_pred eehhhHHHHhhcccc
Q 028920 160 IQVYSWLSALQTDCK 174 (202)
Q Consensus 160 iQVdsWL~al~~d~k 174 (202)
-|.+.|+.|++.=.|
T Consensus 98 eqy~~WMaA~rlAsk 112 (137)
T 2ys3_A 98 QQYARWMAGCRLASK 112 (137)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcc
Confidence 899999999985444
No 65
>2fjl_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; beta-barrel, hydrolase; NMR {Rattus norvegicus} SCOP: b.55.1.1
Probab=91.39 E-value=0.79 Score=36.41 Aligned_cols=33 Identities=30% Similarity=0.793 Sum_probs=26.5
Q ss_pred ceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeec
Q 028920 63 SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLST 109 (202)
Q Consensus 63 SgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sT 109 (202)
.|+||.+. |+ ...|-+||.||.|.=+||+...+
T Consensus 4 ~G~L~~~~----------~~----~~~w~~~~fvL~~~~L~y~~e~s 36 (150)
T 2fjl_A 4 NGILYLED----------PV----NHEWYPHYFVLTSSKIYYSEETS 36 (150)
T ss_dssp EEEEEEEE----------TT----TTEEEEEEEEEETTEEEECCCCS
T ss_pred ceEEEeec----------CC----CCCceEeEEEEECCEEEEEeecc
Confidence 48999986 33 35799999999999999987433
No 66
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=78.13 E-value=1.6 Score=29.26 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=18.9
Q ss_pred ccchhhHHHHHHHHhhhcChHHHHHHHHHhhh
Q 028920 20 EKVELTATELESLRSELADLEDREAHLKAQLE 51 (202)
Q Consensus 20 ekvelt~~EvesLRsEla~~eEREa~lkAqLe 51 (202)
.-||...+|++.||.++..+.++-+.|+++|+
T Consensus 19 ~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 19 PEIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555556666666666666666666666654
No 67
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=75.82 E-value=1.7 Score=29.21 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=27.4
Q ss_pred hHHHHHHHHhhhcChHHHHHHHHHhhhhHHH
Q 028920 25 TATELESLRSELADLEDREAHLKAQLEHVDE 55 (202)
Q Consensus 25 t~~EvesLRsEla~~eEREa~lkAqLehvDE 55 (202)
+.+|+|.||.|++++..|-+.|+++++..-.
T Consensus 17 ~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~ 47 (53)
T 2yy0_A 17 ENPEIELLRLELAEMKEKYEAIVEENKKLKA 47 (53)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999876543
No 68
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=75.39 E-value=1.7 Score=32.96 Aligned_cols=34 Identities=32% Similarity=0.461 Sum_probs=28.5
Q ss_pred cccchhhHHHHHHHHhhhcChHHHHHHHHHhhhh
Q 028920 19 QEKVELTATELESLRSELADLEDREAHLKAQLEH 52 (202)
Q Consensus 19 qekvelt~~EvesLRsEla~~eEREa~lkAqLeh 52 (202)
.|.+.-...|+++|+.|-..+.+|-+.|.++|||
T Consensus 11 ~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~ 44 (100)
T 1go4_E 11 REEADTLRLKVEELEGERSRLEEEKRMLEAQLER 44 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567777788888888888889999999999987
No 69
>2coa_A Protein kinase C, D2 type; protein kinase D2, PH domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.55.1.1
Probab=74.83 E-value=5.4 Score=31.15 Aligned_cols=60 Identities=22% Similarity=0.277 Sum_probs=49.3
Q ss_pred ccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCccc-CCCceEEEEEEEeec
Q 028920 89 DWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITR-ENGEMQYCFYILTRH 148 (202)
Q Consensus 89 DWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~r-Edge~~yaFyIlTrh 148 (202)
.|-.+|-+|.+-||-+|---++=.|=-.+-|+||.-|-.-.++.- ..+..-++|=|.|.+
T Consensus 23 ~rKRHYWrLD~K~Itlf~~e~~~~~ykeIpL~eIl~v~~~~~~~~l~~~~~~hcFEi~T~~ 83 (125)
T 2coa_A 23 LRKRHYWRLDCKCITLFQNNTTNRYYKEIPLSEILTVESAQNFSLVPPGTNPHCFEIVTAN 83 (125)
T ss_dssp CCEEEEEEECSSEEEEESSSSCSSCSEEEETTTCCEEEESCCCSSSCTTSCCEEEEEECSS
T ss_pred cccceeeEecCCeEEEEecCCCCceeeeeehhHeecccccccccccCCCCCCceEEEEeCC
Confidence 588999999999999999999888988999999988877655553 234445899999964
No 70
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=67.63 E-value=3.6 Score=30.63 Aligned_cols=42 Identities=24% Similarity=0.356 Sum_probs=28.6
Q ss_pred HHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhhh----cceeEEE
Q 028920 27 TELESLRSELADLEDREAHLKAQLEHVDEILRSAR----LSGYLYI 68 (202)
Q Consensus 27 ~EvesLRsEla~~eEREa~lkAqLehvDEvLRsar----lSgYLyi 68 (202)
..+..|+.|+++++++|+.|-.++..+.+-||... -..|.|.
T Consensus 6 ~~~~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lted~~n~~~aYV 51 (106)
T 2aze_B 6 GRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSEDTDSQRLAYV 51 (106)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccee
Confidence 45677888888888888888777777666665443 2345555
No 71
>3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus}
Probab=65.83 E-value=6.6 Score=30.72 Aligned_cols=31 Identities=19% Similarity=0.599 Sum_probs=24.1
Q ss_pred cceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeee
Q 028920 62 LSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYL 106 (202)
Q Consensus 62 lSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL 106 (202)
.-|||+.|. .=+.-|-.||+||...++.||=
T Consensus 23 ~~g~l~~~~--------------~~~~~w~~rw~vl~~~~~~~~~ 53 (228)
T 3tfm_A 23 FHSFLYMNG--------------GLMNSWKRRWCVLKDETFLWFR 53 (228)
T ss_dssp EEEEEEECC--------------TTTCCCEEEEEEEETTEEEEES
T ss_pred eEEEEeecC--------------cccccceEEEEEEeCCEEEEec
Confidence 468999882 2356699999999988887775
No 72
>2fcw_A Alpha-2-macroglobulin receptor-associated protein; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: a.13.1.1 PDB: 2ftu_A
Probab=62.77 E-value=7 Score=30.22 Aligned_cols=35 Identities=43% Similarity=0.574 Sum_probs=27.8
Q ss_pred hhhHHHHHHHHhhhcChHHHH---HHHHHhhhhHHHHH
Q 028920 23 ELTATELESLRSELADLEDRE---AHLKAQLEHVDEIL 57 (202)
Q Consensus 23 elt~~EvesLRsEla~~eERE---a~lkAqLehvDEvL 57 (202)
.+|..|++|+|.||---|-|- .|+++||+-.++-+
T Consensus 20 NFT~~ELeSlK~EL~HfE~rl~K~rH~~~el~l~~~k~ 57 (109)
T 2fcw_A 20 NLTDKELEAFREELKHFEAKIEKHNHYQKQLEIAHEKL 57 (109)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999888664 57778887665544
No 73
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=59.42 E-value=8.1 Score=33.75 Aligned_cols=40 Identities=18% Similarity=0.375 Sum_probs=31.5
Q ss_pred ccchhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhh
Q 028920 20 EKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRS 59 (202)
Q Consensus 20 ekvelt~~EvesLRsEla~~eEREa~lkAqLehvDEvLRs 59 (202)
-|++....|+++|+.+.+.+++.-+.++++++.+.+.|+.
T Consensus 3 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~ 42 (403)
T 4etp_A 3 SKIAALKEKIAALKEKIAALKEKIKDTELGMKELNEILIK 42 (403)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3677778888888888888888888888888888887765
No 74
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=56.94 E-value=11 Score=26.52 Aligned_cols=43 Identities=26% Similarity=0.408 Sum_probs=32.0
Q ss_pred cchhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhhhccee
Q 028920 21 KVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSGY 65 (202)
Q Consensus 21 kvelt~~EvesLRsEla~~eEREa~lkAqLehvDEvLRsarlSgY 65 (202)
.++-..++++.++.++..++++.+.++.+++.+.+-++ .+++|
T Consensus 65 ~i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~~--~~~~~ 107 (112)
T 1l8d_A 65 LLSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEIK--RLTPL 107 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHh
Confidence 45556678888888888888888888888888887777 66655
No 75
>1w1g_A HPDK1, 3-phosphoinositide dependent protein kinase-1; transferase, PKB, pleckstrin homology domain, inositol phosphate, signal transduction; HET: 4PT; 1.45A {Homo sapiens} SCOP: b.55.1.1 PDB: 1w1d_A* 1w1h_A 2vki_A
Probab=56.50 E-value=25 Score=27.92 Aligned_cols=87 Identities=11% Similarity=0.039 Sum_probs=57.2
Q ss_pred hhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceE
Q 028920 60 ARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQ 139 (202)
Q Consensus 60 arlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~ 139 (202)
--..|||..|..- -|=.|..||.....+||.-.....-.+.+.++.-.-|..+|.-
T Consensus 52 Ilk~G~v~KrkGl----------------~~kkR~liLT~~PrL~Yvdp~~~~~KGeIpls~~l~ve~k~~~-------- 107 (151)
T 1w1g_A 52 ILKMGPVDKRKGL----------------FARRRQLLLTEGPHLYYVDPVNKVLKGEIPWSQELRPEAKNFK-------- 107 (151)
T ss_dssp EEEEEEEEEEETT----------------EEEEEEEEEETTTEEEEEETTTTEEEEEECCCTTCEEEESSSS--------
T ss_pred EEEEEEEEecccC----------------cceeEEEEEcCCceEEEEcCccccccceEecCCCeeEEEcCCC--------
Confidence 3568999998651 1778999999999999986666555555656543333333311
Q ss_pred EEEEEEeecceeeeecccceeehhhHHHHhhccc
Q 028920 140 YCFYILTRHGLRIECSSISKIQVYSWLSALQTDC 173 (202)
Q Consensus 140 yaFyIlTrhGLR~ECSS~skiQVdsWL~al~~d~ 173 (202)
.|.|.|.- =-|+=+- ++-+..-|..||+.=.
T Consensus 108 -~F~I~Tp~-RtY~~~d-~~~~AqeWv~aI~~~~ 138 (151)
T 1w1g_A 108 -TFFVHTPN-RTYYLMD-PSGNAHKWCRKIQEVW 138 (151)
T ss_dssp -EEEEEETT-EEEEEEC-TTSCHHHHHHHHHHHH
T ss_pred -EEEEECCC-ceEEEEc-CccCHHHHHHHHHHHH
Confidence 78887764 3233222 2778999999998533
No 76
>2d9z_A Protein kinase C, NU type; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.42 E-value=21 Score=28.01 Aligned_cols=60 Identities=18% Similarity=0.309 Sum_probs=47.1
Q ss_pred ccceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCccc-CCCceEEEEEEEeec
Q 028920 89 DWLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITR-ENGEMQYCFYILTRH 148 (202)
Q Consensus 89 DWlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~r-Edge~~yaFyIlTrh 148 (202)
.|-.+|-+|.+-||-+|---++=.+=--+-|+||.-|-.-.++.- ..+..-+||=|.|.+
T Consensus 23 ~rKRHYWrLD~K~Itlf~~e~~~k~ykeIpLseIL~v~~~~~~~~~~~~~~phcFEi~T~~ 83 (129)
T 2d9z_A 23 LRKRHYWRLDSKCLTLFQNESGSKYYKEIPLSEILRISSPRDFTNISQGSNPHCFEIITDT 83 (129)
T ss_dssp CCEEEEEEEESSCEEEESCSSCCSCCCEECTTTCCEECCTTCCCCSSSCSCCCSEEEECSS
T ss_pred cccceeeEecCCeEEEEecCCCCceeceeeHHHhcccccccCccccCCCCCCceEEEEECC
Confidence 499999999999999999888877878899999977776655542 234344889999864
No 77
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=52.10 E-value=11 Score=24.01 Aligned_cols=32 Identities=28% Similarity=0.426 Sum_probs=21.6
Q ss_pred ccchhhHHHHHHHHhhhcChHHHHHHHHHhhh
Q 028920 20 EKVELTATELESLRSELADLEDREAHLKAQLE 51 (202)
Q Consensus 20 ekvelt~~EvesLRsEla~~eEREa~lkAqLe 51 (202)
.+...+...++.|..+++.+|+.-+.|.++|.
T Consensus 37 ~~~~~~~~~~~~L~~ri~~Le~~l~~l~~~l~ 68 (70)
T 1zme_C 37 KKIVVSTKYLQQLQKDLNDKTEENNRLKALLL 68 (70)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455666677787777777777777666654
No 78
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=51.48 E-value=8.8 Score=28.40 Aligned_cols=27 Identities=26% Similarity=0.335 Sum_probs=17.8
Q ss_pred HHHHHHhhhcChHHHHHHHHHhhhhHH
Q 028920 28 ELESLRSELADLEDREAHLKAQLEHVD 54 (202)
Q Consensus 28 EvesLRsEla~~eEREa~lkAqLehvD 54 (202)
|.++|+++++.+++..++|.+++....
T Consensus 2 ~~~~L~~~i~~L~~q~~~L~~ei~~~~ 28 (85)
T 3viq_B 2 EKSQLESRVHLLEQQKEQLESSLQDAL 28 (85)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777777776665543
No 79
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=48.99 E-value=4.4 Score=30.07 Aligned_cols=31 Identities=19% Similarity=0.539 Sum_probs=24.2
Q ss_pred hHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhh
Q 028920 25 TATELESLRSELADLEDREAHLKAQLEHVDEILRS 59 (202)
Q Consensus 25 t~~EvesLRsEla~~eEREa~lkAqLehvDEvLRs 59 (202)
-..|||-||..|++++||-++|... ..+||+
T Consensus 13 VREEVevLKe~I~EL~e~~~qLE~E----N~~Lk~ 43 (78)
T 1dip_A 13 VREEVEILKEQIRELVEKNSQLERE----NTLLKT 43 (78)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHH----HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHH
Confidence 3568999999999999998766543 456665
No 80
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=45.93 E-value=17 Score=24.68 Aligned_cols=31 Identities=39% Similarity=0.553 Sum_probs=26.3
Q ss_pred hhhHHHHHHHHhhhcChHHHHHHHHHhhhhH
Q 028920 23 ELTATELESLRSELADLEDREAHLKAQLEHV 53 (202)
Q Consensus 23 elt~~EvesLRsEla~~eEREa~lkAqLehv 53 (202)
-++..|+..|.+|+..+|.+-+.||..|..+
T Consensus 16 gfspeelaaleselqalekklaalksklqal 46 (48)
T 1g6u_A 16 GFSPEELAALESELQALEKKLAALKSKLQAL 46 (48)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4677899999999999999999999888653
No 81
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=44.94 E-value=12 Score=27.18 Aligned_cols=32 Identities=22% Similarity=0.490 Sum_probs=15.0
Q ss_pred HHHHHHHhhhcCh---HHHHHHHHHhhhhHHHHHh
Q 028920 27 TELESLRSELADL---EDREAHLKAQLEHVDEILR 58 (202)
Q Consensus 27 ~EvesLRsEla~~---eEREa~lkAqLehvDEvLR 58 (202)
+|++.|+.++..+ ..+-.+|+.+|+++-..|+
T Consensus 6 ~~~~~l~~~~~~~~~l~~~~~~l~~~l~~~~~~l~ 40 (182)
T 3kqg_A 6 AQIPELKSDLEKASALNTKIRALQGSLENMSKLLK 40 (182)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555554443 5555566777777766665
No 82
>2qhk_A Methyl-accepting chemotaxis protein; structural genomics, PSI-2, MCSG, protein structur initiative; 1.91A {Vibrio parahaemolyticus}
Probab=44.21 E-value=23 Score=25.89 Aligned_cols=44 Identities=34% Similarity=0.555 Sum_probs=24.8
Q ss_pred hHHHHHHHHhhhcChHHHHHHHHHhhhh--------------------HHHHHhhhhc--ceeEEEee
Q 028920 25 TATELESLRSELADLEDREAHLKAQLEH--------------------VDEILRSARL--SGYLYIRT 70 (202)
Q Consensus 25 t~~EvesLRsEla~~eEREa~lkAqLeh--------------------vDEvLRsarl--SgYLyiRt 70 (202)
...+++++|..+ +++|++.+|.+++- +-++|+..|+ +||.|+-.
T Consensus 6 ~~~~~~~~~~~~--~~~~~~~l~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~l~~~~~g~~GY~fi~d 71 (174)
T 2qhk_A 6 LEAELVRDRQEL--IDARKKELKAYMMMGVTAIKPLYDSDVNGSNKQAAKEILKAMRFESDGYFFAYD 71 (174)
T ss_dssp --CHHHHHHHHH--HHHHHHHHHHHHHHHHHHTHHHHHHCSTTTTHHHHHHHHHHCCSBTTBCCEEEC
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcEECCCCEEEEEe
Confidence 345566666654 56666666655543 3345566665 47887743
No 83
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=42.25 E-value=16 Score=29.95 Aligned_cols=65 Identities=22% Similarity=0.261 Sum_probs=40.7
Q ss_pred HHHHHHHHhhhcChHHHHH---HHHHhhhhHHHHHhhhhc-ceeEEEeeecccCCCCCCCCCCCCccccceeeEEeecc
Q 028920 26 ATELESLRSELADLEDREA---HLKAQLEHVDEILRSARL-SGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHGS 100 (202)
Q Consensus 26 ~~EvesLRsEla~~eEREa---~lkAqLehvDEvLRsarl-SgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G~ 100 (202)
.+|-+.||.|++.++++.+ +++++.+.+.++|....- +.|=++-.|=.+-. -+.|.-.+++=.|+
T Consensus 25 ~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL~~~~~~~~~~~i~A~VI~~~----------~~~~~~~i~IdkGs 93 (255)
T 2j5u_A 25 YTENQHLKERLEELAQLESEVADLKKENKDLKESLDITDSIRDYDPLNASVISRN----------PTNWNDQVEIDKGS 93 (255)
T ss_dssp -CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTCEEEEEEEEEECC----------GGGTTTEEEESCCG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccCceEEEEEEEEC----------CCCcceEEEEeCCc
Confidence 4566677777776665554 445566777888887764 78877766554432 34576666654444
No 84
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=41.05 E-value=25 Score=26.03 Aligned_cols=45 Identities=22% Similarity=0.381 Sum_probs=33.9
Q ss_pred ccchhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcce
Q 028920 20 EKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSG 64 (202)
Q Consensus 20 ekvelt~~EvesLRsEla~~eEREa~lkAqLehvDEvLRsarlSg 64 (202)
|.+.-+.+...++-++|.++|.|-..|.++++.+++-++--|-.|
T Consensus 31 EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~~~ 75 (81)
T 1wt6_A 31 REMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAEG 75 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 444455566677778999999999999999999998887755444
No 85
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=40.68 E-value=29 Score=24.28 Aligned_cols=38 Identities=16% Similarity=0.270 Sum_probs=30.6
Q ss_pred hhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhh
Q 028920 23 ELTATELESLRSELADLEDREAHLKAQLEHVDEILRSA 60 (202)
Q Consensus 23 elt~~EvesLRsEla~~eEREa~lkAqLehvDEvLRsa 60 (202)
+-...+++.++.+|..+.++.+.++.+++.+...+.-.
T Consensus 6 ~~~~~~~~~~~~~l~~L~~~~~~l~~~i~~l~~~l~~l 43 (112)
T 1l8d_A 6 EELETKKTTIEEERNEITQRIGELKNKIGDLKTAIEEL 43 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44455788888899999889999999999888888654
No 86
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=40.05 E-value=17 Score=23.93 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=17.6
Q ss_pred hHHHHHHHHhhhcChHHHHHHHHHhhhhHHHH
Q 028920 25 TATELESLRSELADLEDREAHLKAQLEHVDEI 56 (202)
Q Consensus 25 t~~EvesLRsEla~~eEREa~lkAqLehvDEv 56 (202)
+..+++.|.++-..+...-+.|..++..+-.+
T Consensus 27 Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~ 58 (61)
T 1t2k_D 27 LEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQL 58 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555555555555555555555555444
No 87
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=38.86 E-value=17 Score=23.13 Aligned_cols=25 Identities=44% Similarity=0.563 Sum_probs=16.5
Q ss_pred HHHHHHhhhcChHHHHHHH---HHhhhh
Q 028920 28 ELESLRSELADLEDREAHL---KAQLEH 52 (202)
Q Consensus 28 EvesLRsEla~~eEREa~l---kAqLeh 52 (202)
||..|..|.|.+|...-+| -|||||
T Consensus 2 evaqlekevaqaeaenyqleqevaqleh 29 (33)
T 1fmh_A 2 EVAQLEKEVAQAEAENYQLEQEVAQLEH 29 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5667777887777655444 367776
No 88
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=38.66 E-value=19 Score=24.63 Aligned_cols=23 Identities=22% Similarity=0.394 Sum_probs=10.9
Q ss_pred HHHHHHhhhcChHHHHHHHHHhh
Q 028920 28 ELESLRSELADLEDREAHLKAQL 50 (202)
Q Consensus 28 EvesLRsEla~~eEREa~lkAqL 50 (202)
+++.|..|+..+.++-..|++||
T Consensus 55 ~~~~l~~e~~~L~~~~~~L~~~l 77 (83)
T 1nkp_B 55 KNHTHQQDIDDLKRQNALLEQQV 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444445555544
No 89
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=38.32 E-value=33 Score=23.04 Aligned_cols=37 Identities=16% Similarity=0.320 Sum_probs=26.1
Q ss_pred chhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 028920 22 VELTATELESLRSELADLEDREAHLKAQLEHVDEILR 58 (202)
Q Consensus 22 velt~~EvesLRsEla~~eEREa~lkAqLehvDEvLR 58 (202)
.+-+..+++.|..+-+.++.+-+.|+.++..+-++|+
T Consensus 25 ~~~le~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~ll~ 61 (63)
T 1ci6_A 25 QEALTGECKELEKKNEALKERADSLAKEIQYLKDLIE 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445667777777777777777777777777666654
No 90
>1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1
Probab=37.38 E-value=27 Score=25.25 Aligned_cols=78 Identities=19% Similarity=0.340 Sum_probs=49.7
Q ss_pred eeeEEeecceeEeeeee--c-CCCCCCcceeehhhhc--cCCC-Cccc--CCCceEEEEEEEeecc---eeeeeccccee
Q 028920 92 PRFIVLHGSCIFFYLLS--T-DLSPQDSTVLSDVVEV--ASLP-SITR--ENGEMQYCFYILTRHG---LRIECSSISKI 160 (202)
Q Consensus 92 pRFVVl~G~ciffyL~s--T-DLsPQdStllsDIVEV--g~lP-~f~r--Edge~~yaFyIlTrhG---LR~ECSS~ski 160 (202)
.||.+|.-.+.++|--+ + .-++..++=++||-|| |.-+ .|.+ ++...-+||-|+-..+ |-+-|.|. -
T Consensus 30 ~r~f~l~~~~~~~w~~s~~~~~~~~~~~i~i~~I~eIr~G~~s~~~~~~~~~~~~~~~FsIiy~~~~k~LdlvA~s~--~ 107 (131)
T 1mai_A 30 ERFYKLQEDCKTIWQESRKVMRSPESQLFSIEDIQEVRMGHRTEGLEKFARDIPEDRCFSIVFKDQRNTLDLIAPSP--A 107 (131)
T ss_dssp EEEEEECTTSSEEEECCCCTTCCTTTTEEEGGGEEEEEESSCSHHHHHHCTTSCGGGEEEEEESSSCCCEEEECSSH--H
T ss_pred eEEEEECCCCCEEEeCCcCCCCCCcCcEEEHhhhHHHHCCCCCHHHHhhhhcCCccceEEEEECCCCceEEEEeCCH--H
Confidence 58999887766665532 2 3347888999999665 5422 2222 1222345898887653 77788764 4
Q ss_pred ehhhHHHHhhc
Q 028920 161 QVYSWLSALQT 171 (202)
Q Consensus 161 QVdsWL~al~~ 171 (202)
...-|++.|+.
T Consensus 108 e~~~Wv~gL~~ 118 (131)
T 1mai_A 108 DAQHWVQGLRK 118 (131)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 56779988874
No 91
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=37.20 E-value=32 Score=24.02 Aligned_cols=31 Identities=35% Similarity=0.463 Sum_probs=23.0
Q ss_pred cchhh---HHHHHHHHhhhcChHHHHHHHHHhhh
Q 028920 21 KVELT---ATELESLRSELADLEDREAHLKAQLE 51 (202)
Q Consensus 21 kvelt---~~EvesLRsEla~~eEREa~lkAqLe 51 (202)
+..|+ ..|++.|-.+|+.+|.+-+.|.++|.
T Consensus 13 ~~KLSykeqrEle~le~~Ie~LE~~i~~le~~la 46 (89)
T 2lw1_A 13 SSKLSYKLQRELEQLPQLLEDLEAKLEALQTQVA 46 (89)
T ss_dssp SCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555 46788888888888888888888774
No 92
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=36.80 E-value=23 Score=27.03 Aligned_cols=33 Identities=24% Similarity=0.375 Sum_probs=25.0
Q ss_pred cchhhHHHHHHHHhhhc-----------ChHHHHHHHHHhhhhH
Q 028920 21 KVELTATELESLRSELA-----------DLEDREAHLKAQLEHV 53 (202)
Q Consensus 21 kvelt~~EvesLRsEla-----------~~eEREa~lkAqLehv 53 (202)
-|+-+-.||+.||.|+. +++.|-++|.|+|++-
T Consensus 16 ~Ie~Lkreie~lk~ele~l~~E~q~~v~ql~~~i~~Le~eL~e~ 59 (120)
T 3i00_A 16 LIERLYREISGLKAQLENMKTESQRVVLQLKGHVSELEADLAEQ 59 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57777888888888764 5667778888888774
No 93
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=36.67 E-value=22 Score=25.78 Aligned_cols=28 Identities=36% Similarity=0.515 Sum_probs=20.3
Q ss_pred HHHHHHHhhhcChHHHHHHHHHhhhhHH
Q 028920 27 TELESLRSELADLEDREAHLKAQLEHVD 54 (202)
Q Consensus 27 ~EvesLRsEla~~eEREa~lkAqLehvD 54 (202)
.|++.|..+|.+++.-|+.|.++|+.+.
T Consensus 4 ~~~~~l~~eL~~l~~eE~~L~~eL~~lE 31 (96)
T 3q8t_A 4 SDSEQLQRELKELALEEERLIQELEDVE 31 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4667777777777777777777776653
No 94
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=36.31 E-value=35 Score=22.71 Aligned_cols=37 Identities=24% Similarity=0.301 Sum_probs=26.1
Q ss_pred chhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 028920 22 VELTATELESLRSELADLEDREAHLKAQLEHVDEILR 58 (202)
Q Consensus 22 velt~~EvesLRsEla~~eEREa~lkAqLehvDEvLR 58 (202)
++-+..+|+.|..+-+.+...-+.|..++.++-.+|.
T Consensus 25 ~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l~ 61 (63)
T 2wt7_A 25 TDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILA 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445567777777777777777777777777777664
No 95
>1v5m_A SH2 and PH domain-containing adapter protein APS; adaptor protein, pleckstrin homology domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.55.1.1
Probab=36.13 E-value=36 Score=27.07 Aligned_cols=81 Identities=20% Similarity=0.370 Sum_probs=49.5
Q ss_pred cccce-eeEEee-cc----eeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEEEEEEEeecceeeeecccceee
Q 028920 88 DDWLP-RFIVLH-GS----CIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQYCFYILTRHGLRIECSSISKIQ 161 (202)
Q Consensus 88 DDWlp-RFVVl~-G~----ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~yaFyIlTrhGLR~ECSS~skiQ 161 (202)
-.|=- |+|.-+ |. =+=||---.--.|.-++.++.|.||-.---.--.| --+-|-+=+--|.-|-=-.....|
T Consensus 40 ~~W~k~RLvL~k~g~G~~y~LEfy~PPkssKpK~~i~cs~I~EVR~tt~LEmPD--~~nTFVlK~~n~~eyi~ea~d~~q 117 (136)
T 1v5m_A 40 AQWQKCRLLLRRAVAGERFRLEFFVPPKASRPKVSIPLSAIIEVRTTMPLEMPE--KDNTFVLKVENGAEYILETIDSLQ 117 (136)
T ss_dssp CCCEEEEEEEEECSSSCCEEEEEESSTTSSSCSSCEETTTCCBCCCCCCSSSCC--CTTEECCBCTTSCBEEEECSSHHH
T ss_pred cchhheeeEEEEccCCCceEEEEecCCcccCCccccchhhhhhhhhccccccCC--ccceEEEEecCCcEEEEEcCCHHH
Confidence 46844 444444 22 23355544556788899999999997532221122 234455555555455445667889
Q ss_pred hhhHHHHhh
Q 028920 162 VYSWLSALQ 170 (202)
Q Consensus 162 VdsWL~al~ 170 (202)
..||++.|+
T Consensus 118 ~~sWla~Ir 126 (136)
T 1v5m_A 118 KHSWVADIQ 126 (136)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999996
No 96
>2p01_A Alpha-2-macroglobulin receptor-associated protein; RAP, cell adhesion; NMR {Homo sapiens} PDB: 2p03_A
Probab=35.90 E-value=29 Score=31.01 Aligned_cols=36 Identities=44% Similarity=0.601 Sum_probs=28.7
Q ss_pred hhhHHHHHHHHhhhcChHHHH---HHHHHhhhhHHHHHh
Q 028920 23 ELTATELESLRSELADLEDRE---AHLKAQLEHVDEILR 58 (202)
Q Consensus 23 elt~~EvesLRsEla~~eERE---a~lkAqLehvDEvLR 58 (202)
.+|..|++|+|.||---|-|- .|++|||+-.++-+.
T Consensus 234 NFT~~ELeSlK~EL~HfE~rL~KlrH~~~El~l~~~k~k 272 (323)
T 2p01_A 234 NLTDKELEAFREELKHFEAKIEKHNHYQKQLEIAHEKLR 272 (323)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999888764 577888886656553
No 97
>2rjz_A PILO protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Pseudomonas aeruginosa}
Probab=35.83 E-value=26 Score=26.57 Aligned_cols=48 Identities=23% Similarity=0.355 Sum_probs=38.4
Q ss_pred hHHHHHHHHhhhcChHHHHHHHHHhh---hhHHHHHh----hhhcceeEEEeeec
Q 028920 25 TATELESLRSELADLEDREAHLKAQL---EHVDEILR----SARLSGYLYIRTRW 72 (202)
Q Consensus 25 t~~EvesLRsEla~~eEREa~lkAqL---ehvDEvLR----sarlSgYLyiRtRW 72 (202)
-++.++.||.+++.++++-+.+..|| +.++.+|. .|+=+|=-...=+|
T Consensus 13 ~aa~L~~l~~ql~~l~~~l~~l~~~LP~~~em~~LL~~i~~~~~~~GL~l~~~~p 67 (147)
T 2rjz_A 13 QAANLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKL 67 (147)
T ss_dssp GCSSHHHHHHHHHHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHhCCCEEEEeee
Confidence 37889999999999999999999999 45555554 68888877766664
No 98
>2it9_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; HET: MSE PGE; 1.80A {Prochlorococcus marinus} SCOP: d.18.1.3
Probab=35.80 E-value=12 Score=29.49 Aligned_cols=64 Identities=25% Similarity=0.282 Sum_probs=48.7
Q ss_pred ccchhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEe
Q 028920 20 EKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVL 97 (202)
Q Consensus 20 ekvelt~~EvesLRsEla~~eEREa~lkAqLehvDEvLRsarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl 97 (202)
=-||||++|...+..=+..+.+--++++.|| +-.-+++.=+----=|..+.|.| ..|=.|||..
T Consensus 30 WAiELTe~E~~~f~~Ll~qL~~~~~~i~~eL------M~EE~I~lE~E~~~~W~eleG~~--------~~~sLr~IL~ 93 (127)
T 2it9_A 30 WAIELDKSEWKILVEVVMELCDQYKLVKEQL------MGDEDITLELERRPWLAILNGDQ--------YGWNLRLILS 93 (127)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHTTTC------CTTCEEEEEEEETTEEEEEEEET--------TEEEEEEEEC
T ss_pred eeeeecHHHHHHHHHHHHHHHHHHHHHHHHh------cchhheeeeecCccEEEEeeccc--------CeeEEEEEEe
Confidence 3589999999999998888877777776655 34445555555556688888887 7899999876
No 99
>3he4_B Synzip5; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=34.91 E-value=26 Score=23.61 Aligned_cols=25 Identities=36% Similarity=0.623 Sum_probs=17.0
Q ss_pred HHHHHhhhcChHHHHHHHHHhhhhH
Q 028920 29 LESLRSELADLEDREAHLKAQLEHV 53 (202)
Q Consensus 29 vesLRsEla~~eEREa~lkAqLehv 53 (202)
|..|..-|..+|||.|.||.--||+
T Consensus 5 vkelknyiqeleernaelknlkehl 29 (46)
T 3he4_B 5 VKELKNYIQELEERNAELKNLKEHL 29 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHhHHHHH
Confidence 3445666777899988877655554
No 100
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=34.14 E-value=22 Score=25.19 Aligned_cols=36 Identities=28% Similarity=0.197 Sum_probs=14.9
Q ss_pred HHHHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcce
Q 028920 29 LESLRSELADLEDREAHLKAQLEHVDEILRSARLSG 64 (202)
Q Consensus 29 vesLRsEla~~eEREa~lkAqLehvDEvLRsarlSg 64 (202)
++.|-..++.-...-..|++||..+-+-|++..-++
T Consensus 30 IeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~~~ 65 (78)
T 3efg_A 30 LTELSEALADARLTGARNAELIRHLLEDLGKVRSTL 65 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTC-------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 344444444444444555566666655556555444
No 101
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=31.71 E-value=22 Score=26.51 Aligned_cols=36 Identities=8% Similarity=0.206 Sum_probs=14.4
Q ss_pred hhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 028920 23 ELTATELESLRSELADLEDREAHLKAQLEHVDEILR 58 (202)
Q Consensus 23 elt~~EvesLRsEla~~eEREa~lkAqLehvDEvLR 58 (202)
++.....+.|+.+|+.+++..+.|...+++.+++++
T Consensus 98 ~~l~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~~ 133 (148)
T 3gpv_A 98 KLMKQQEANVLQLIQDTEKNLKKIQQKIAKYEDEIS 133 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444444444444444433
No 102
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=31.34 E-value=22 Score=24.07 Aligned_cols=29 Identities=28% Similarity=0.294 Sum_probs=14.5
Q ss_pred chhhHHHHHHHHhhhcChHHHHHHHHHhh
Q 028920 22 VELTATELESLRSELADLEDREAHLKAQL 50 (202)
Q Consensus 22 velt~~EvesLRsEla~~eEREa~lkAqL 50 (202)
++-+..+|+.|.+|-+.+...-+.|+.+|
T Consensus 32 ~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l 60 (63)
T 2dgc_A 32 MKQLEDKVEELLSKNYHLENEVARLKKLV 60 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555555555555555555555444
No 103
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=30.34 E-value=27 Score=24.66 Aligned_cols=16 Identities=31% Similarity=0.478 Sum_probs=3.9
Q ss_pred HHHHHHHhhhcChHHH
Q 028920 27 TELESLRSELADLEDR 42 (202)
Q Consensus 27 ~EvesLRsEla~~eER 42 (202)
+|+++|++..+.+|.+
T Consensus 3 ~eie~L~~q~~~Le~~ 18 (86)
T 1x8y_A 3 CQLSQLQCQLAAKEAK 18 (86)
T ss_dssp ---------CTTHHHH
T ss_pred HhHHHHHHHHHHHHHH
Confidence 4566666666665544
No 104
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=29.78 E-value=46 Score=25.53 Aligned_cols=24 Identities=4% Similarity=0.209 Sum_probs=19.7
Q ss_pred hHHHHHHHHHhhhhHHHHHhhhhc
Q 028920 39 LEDREAHLKAQLEHVDEILRSARL 62 (202)
Q Consensus 39 ~eEREa~lkAqLehvDEvLRsarl 62 (202)
+.+|.+.+.+++..+...|+.|+.
T Consensus 51 ak~~q~~~e~rI~~L~~~L~~A~v 74 (158)
T 2p4v_A 51 NKKRLREIDRRVRYLTKCMENLKI 74 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCee
Confidence 456777888888999999999886
No 105
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=29.63 E-value=19 Score=23.87 Aligned_cols=28 Identities=14% Similarity=0.254 Sum_probs=13.9
Q ss_pred hhhHHHHHHHHhhhcChHHHHHHHHHhh
Q 028920 23 ELTATELESLRSELADLEDREAHLKAQL 50 (202)
Q Consensus 23 elt~~EvesLRsEla~~eEREa~lkAqL 50 (202)
.--+.+++.|..|+++++++-+.|+++|
T Consensus 30 d~v~~~~~~l~~e~~~L~~~~~~l~~~l 57 (57)
T 2wuj_A 30 AQVRKDYEIVLRKKTELEAKVNELDERI 57 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3345566666666666666655555543
No 106
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=29.25 E-value=53 Score=24.01 Aligned_cols=17 Identities=35% Similarity=0.390 Sum_probs=8.7
Q ss_pred HHHHHHHhhhhHHHHHh
Q 028920 42 REAHLKAQLEHVDEILR 58 (202)
Q Consensus 42 REa~lkAqLehvDEvLR 58 (202)
.-++|+.+....++=||
T Consensus 56 en~qLk~E~~~wq~Rl~ 72 (81)
T 2jee_A 56 ENNHLKEQQNGWQERLQ 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33455555555555444
No 107
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=29.21 E-value=50 Score=22.14 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=23.7
Q ss_pred HHHHHhhhcChHHHHHHHHHhhhhHHHHHhhh
Q 028920 29 LESLRSELADLEDREAHLKAQLEHVDEILRSA 60 (202)
Q Consensus 29 vesLRsEla~~eEREa~lkAqLehvDEvLRsa 60 (202)
.+-|+..++.++++-+.|++.++.++..+...
T Consensus 41 ~~~L~~~~~~l~~~i~~L~~~~~~L~~~~~~~ 72 (99)
T 1q08_A 41 KGIVQERLQEVEARIAELQSMQRSLQRLNDAC 72 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35677777778888888888888888777543
No 108
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=28.89 E-value=65 Score=22.43 Aligned_cols=40 Identities=28% Similarity=0.405 Sum_probs=28.1
Q ss_pred cchhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhh
Q 028920 21 KVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSA 60 (202)
Q Consensus 21 kvelt~~EvesLRsEla~~eEREa~lkAqLehvDEvLRsa 60 (202)
+||....|--+||.||.|---.-+.|...--++-|+|+-.
T Consensus 11 QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~l 50 (54)
T 1deb_A 11 QVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQL 50 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHH
Confidence 5788888888999998876555555555555566777644
No 109
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=28.81 E-value=26 Score=26.59 Aligned_cols=43 Identities=23% Similarity=0.353 Sum_probs=29.3
Q ss_pred HHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhh--hcceeEEE
Q 028920 26 ATELESLRSELADLEDREAHLKAQLEHVDEILRSA--RLSGYLYI 68 (202)
Q Consensus 26 ~~EvesLRsEla~~eEREa~lkAqLehvDEvLRsa--rlSgYLyi 68 (202)
..||..|+.||+.+|-|...||.--..==.-.|.| .|-||=--
T Consensus 3 ~~e~~~l~~qi~~~ekr~~RLKevF~~ks~eFReav~~LlGykId 47 (123)
T 4dzo_A 3 SKEVAELKKQVESAELKNQRLKEVFQTKIQEFRKACYTLTGYQID 47 (123)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeEEE
Confidence 46899999999999999999986543322223332 45677443
No 110
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=28.32 E-value=59 Score=21.26 Aligned_cols=32 Identities=31% Similarity=0.298 Sum_probs=21.1
Q ss_pred cccchhhHHHHHHHHhhhcChHHHHHHHHHhh
Q 028920 19 QEKVELTATELESLRSELADLEDREAHLKAQL 50 (202)
Q Consensus 19 qekvelt~~EvesLRsEla~~eEREa~lkAqL 50 (202)
+++|+-...|-..|++|+..+.+--++|+.+|
T Consensus 28 e~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~l 59 (61)
T 1t2k_D 28 EKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLL 59 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566666666777777777776666666654
No 111
>2d9w_A Docking protein 2; PH domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.03 E-value=89 Score=24.35 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=51.7
Q ss_pred ccceeeEEeecceeE------eeeeecCC----CCCCcceeehhhhccCCCCcc-cCCCceEEEEEEEeecceeeeeccc
Q 028920 89 DWLPRFIVLHGSCIF------FYLLSTDL----SPQDSTVLSDVVEVASLPSIT-RENGEMQYCFYILTRHGLRIECSSI 157 (202)
Q Consensus 89 DWlpRFVVl~G~cif------fyL~sTDL----sPQdStllsDIVEVg~lP~f~-rEdge~~yaFyIlTrhGLR~ECSS~ 157 (202)
+|=.||-||.+.+-+ ||=-.-.. .|-..+-|+|-|=|.+...-+ .+ ..+ ++|.|.|....-+-+.-.
T Consensus 29 KWrk~w~vLy~~S~~GvaRLE~yd~~ek~~r~~~~rrVIrLsdCisV~~~~~e~~~p-k~~-~aF~l~T~er~~~laAe~ 106 (127)
T 2d9w_A 29 KWRRFGASLYGGSDCALARLELQEGPEKPRRCEAARKVIRLSDCLRVAEAGGEASSP-RDT-SAFFLETKERLYLLAAPA 106 (127)
T ss_dssp BCCEEEEEEECCSSSSCCEEEEECCCSCSSSCSCCEEEECGGGEEEEEECCSCSSSC-SSC-EEEEEEESSCEEEEEECH
T ss_pred hhheeEEEEecCCCCCceeeeeeeccCccccCCCCceEEEhhhCCeEecccCccCCC-Ccc-eEEEEEeCCcEEEEEeCc
Confidence 499999999765533 34332222 233467899988887665441 12 233 899999988777666663
Q ss_pred ceeehhhHHHHhh
Q 028920 158 SKIQVYSWLSALQ 170 (202)
Q Consensus 158 skiQVdsWL~al~ 170 (202)
. +.+.|+.+|.
T Consensus 107 ~--E~~~Wi~~ic 117 (127)
T 2d9w_A 107 A--ERGDWVQAIC 117 (127)
T ss_dssp H--HHHHHHHHHH
T ss_pred H--HHHHHHHHHH
Confidence 2 7999999985
No 112
>1r8d_A Transcription activator MTAN; protein-DNA complex, transcription/DNA complex; 2.70A {Bacillus subtilis} SCOP: a.6.1.3 PDB: 1jbg_A
Probab=27.72 E-value=30 Score=24.13 Aligned_cols=26 Identities=19% Similarity=0.365 Sum_probs=12.2
Q ss_pred HHhhhcChHHHHHHHHHhhhhHHHHH
Q 028920 32 LRSELADLEDREAHLKAQLEHVDEIL 57 (202)
Q Consensus 32 LRsEla~~eEREa~lkAqLehvDEvL 57 (202)
|...++.++++-+.|+++++.++..+
T Consensus 80 l~~~~~~l~~~i~~l~~~~~~l~~~~ 105 (109)
T 1r8d_A 80 LQSQKEILMKKKQRMDEMIQTIDRTL 105 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444445555555554443
No 113
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=27.23 E-value=42 Score=25.00 Aligned_cols=36 Identities=17% Similarity=0.284 Sum_probs=20.8
Q ss_pred chhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHH
Q 028920 22 VELTATELESLRSELADLEDREAHLKAQLEHVDEIL 57 (202)
Q Consensus 22 velt~~EvesLRsEla~~eEREa~lkAqLehvDEvL 57 (202)
.++....++.|..+|+.+++..+.|...++..++.+
T Consensus 83 ~~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~~~ 118 (142)
T 3gp4_A 83 AELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHL 118 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555566666666666666666665555555544
No 114
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=26.99 E-value=35 Score=26.21 Aligned_cols=25 Identities=16% Similarity=0.259 Sum_probs=11.5
Q ss_pred HHHHHHHhhhcChHHHHHHHHHhhh
Q 028920 27 TELESLRSELADLEDREAHLKAQLE 51 (202)
Q Consensus 27 ~EvesLRsEla~~eEREa~lkAqLe 51 (202)
.|+.+|..|++.+.++...++.+++
T Consensus 89 kE~~~lK~el~~~~~k~e~~~~e~~ 113 (138)
T 3hnw_A 89 KEIYDLKHELIAAQIKAESSAKEIK 113 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455555544444444444433
No 115
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=25.34 E-value=33 Score=28.58 Aligned_cols=19 Identities=21% Similarity=0.495 Sum_probs=15.8
Q ss_pred EEEEEEEeec-ceeeeeccc
Q 028920 139 QYCFYILTRH-GLRIECSSI 157 (202)
Q Consensus 139 ~yaFyIlTrh-GLR~ECSS~ 157 (202)
-|+|||..|| ||-|-+-..
T Consensus 3 iy~~yi~~~~~~liy~~~~~ 22 (219)
T 2j3t_D 3 IFSVYVVNKAGGLIYQLDSY 22 (219)
T ss_dssp EEEEEEECTTSCEEEEEECC
T ss_pred EEEEEEEecCCceEEecccC
Confidence 4899999999 788887655
No 116
>3zwh_Q Myosin-9; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} PDB: 2lnk_C
Probab=24.84 E-value=22 Score=23.57 Aligned_cols=32 Identities=22% Similarity=0.401 Sum_probs=24.0
Q ss_pred HHhhhcChHHHHHHHHHhhhhHHHHHhhhhcc
Q 028920 32 LRSELADLEDREAHLKAQLEHVDEILRSARLS 63 (202)
Q Consensus 32 LRsEla~~eEREa~lkAqLehvDEvLRsarlS 63 (202)
+.-||.+++||-..+..|+.++--=+|...++
T Consensus 4 lQrELeEa~Erae~ae~~vnkLR~k~R~~~~~ 35 (45)
T 3zwh_Q 4 LQRELEDATETADAMNREVSSLKNKLRRGDLP 35 (45)
T ss_dssp SSSHHHHHTTTHHHHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCC
Confidence 34578889999999999988877666655443
No 117
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=24.30 E-value=58 Score=24.84 Aligned_cols=24 Identities=8% Similarity=0.358 Sum_probs=17.2
Q ss_pred hHHHHHHHHHhhhhHHHHHhhhhc
Q 028920 39 LEDREAHLKAQLEHVDEILRSARL 62 (202)
Q Consensus 39 ~eEREa~lkAqLehvDEvLRsarl 62 (202)
+.++.+.+.+++..+...|+.|+.
T Consensus 51 ak~~q~~~e~ri~~Le~~L~~a~v 74 (158)
T 1grj_A 51 AREQQGFCEGRIKDIEAKLSNAQV 74 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCee
Confidence 334555666788888888888876
No 118
>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate binding, lectin, mannose, sugar BIND protein; 1.80A {Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A 3pak_A
Probab=24.28 E-value=26 Score=24.37 Aligned_cols=83 Identities=11% Similarity=0.090 Sum_probs=41.2
Q ss_pred HHHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcceeEEEee--ecc-------cCCCCCCCCCCCCccccceeeEEeecc
Q 028920 30 ESLRSELADLEDREAHLKAQLEHVDEILRSARLSGYLYIRT--RWK-------PLPGEPPPIDDTDVDDWLPRFIVLHGS 100 (202)
Q Consensus 30 esLRsEla~~eEREa~lkAqLehvDEvLRsarlSgYLyiRt--RW~-------aLpgEpppiDDtdVDDWlpRFVVl~G~ 100 (202)
|.|+++++.++++-+.++.+| .+......-.=++|.+... .|. .+.|.--.|++.+-.++|-.++--.+
T Consensus 5 e~l~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~Cy~~~~~~~tw~~A~~~C~~~g~~La~i~s~~e~~~l~~~~~~~~- 82 (148)
T 3pbf_A 5 EELQTELYEIKHQILQTMGVL-SLQGSMLSVGDKVFSTNGQSVNFDTIKEMCTRAGGNIAVPRTPEENEAIASIAKKYN- 82 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-HHTTSCEEETTEEEEEEEEEECHHHHHHHHHHTTCEECCCCSHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhcceeeCCEEEEEcCCccCHHHHHHHHhhcCCEEeeeCCHHHHHHHHHHHHhCC-
Confidence 456666666655555555555 2222222223345555432 332 35566666777776666666554333
Q ss_pred eeEeeeeecCCCCCC
Q 028920 101 CIFFYLLSTDLSPQD 115 (202)
Q Consensus 101 ciffyL~sTDLsPQd 115 (202)
-.|++-.+|....+
T Consensus 83 -~~~WIGl~~~~~~~ 96 (148)
T 3pbf_A 83 -NYVYLGMIEDQTPG 96 (148)
T ss_dssp -SCEEEEEEECSSTT
T ss_pred -CCEEEEeEecCCCC
Confidence 24445445544333
No 119
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=24.09 E-value=64 Score=23.81 Aligned_cols=38 Identities=18% Similarity=0.173 Sum_probs=31.6
Q ss_pred CcccchhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHH
Q 028920 18 GQEKVELTATELESLRSELADLEDREAHLKAQLEHVDE 55 (202)
Q Consensus 18 ~qekvelt~~EvesLRsEla~~eEREa~lkAqLehvDE 55 (202)
-.+|+.-..+|+++|..+-+.+++.-..+..+|.++=|
T Consensus 4 ~~~~~~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lte 41 (106)
T 2aze_B 4 MGGRLEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSE 41 (106)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34567888999999999999999999998899988753
No 120
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=23.99 E-value=97 Score=26.35 Aligned_cols=21 Identities=29% Similarity=0.203 Sum_probs=14.8
Q ss_pred hHHHHHHHHHhhhhHHHHHhh
Q 028920 39 LEDREAHLKAQLEHVDEILRS 59 (202)
Q Consensus 39 ~eEREa~lkAqLehvDEvLRs 59 (202)
+.=-||.|.||-+-|..-|-.
T Consensus 371 ~~~~~~~~~~q~~~~~~~~~~ 391 (406)
T 4dyl_A 371 ALCSQAKLQAQQELLQTKLEH 391 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHhHHHHHHHHHHHHHHHHHh
Confidence 334477888888888777754
No 121
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=23.94 E-value=65 Score=23.01 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=24.6
Q ss_pred HHHHHHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 028920 27 TELESLRSELADLEDREAHLKAQLEHVDEILR 58 (202)
Q Consensus 27 ~EvesLRsEla~~eEREa~lkAqLehvDEvLR 58 (202)
..|++|...|++..++..++++.|.++=|+|-
T Consensus 21 ~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld 52 (72)
T 3cve_A 21 GQLSEMEQRLEKSQSEQDAFRSNLKTLLEILD 52 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34677777888888888888888888777764
No 122
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=23.93 E-value=63 Score=20.55 Aligned_cols=33 Identities=12% Similarity=0.159 Sum_probs=16.4
Q ss_pred chhhHHHHHHHHhhhcChHHHHHHHHHhhhhHH
Q 028920 22 VELTATELESLRSELADLEDREAHLKAQLEHVD 54 (202)
Q Consensus 22 velt~~EvesLRsEla~~eEREa~lkAqLehvD 54 (202)
++-...++.++++++..+..+-.++.+.|+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~ 46 (60)
T 3htk_A 14 VEELTEKCSLKTDEFLKAKEKINEIFEKLNTIR 46 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555555544444444444443
No 123
>3vxj_A DYP; DYE-decolorizing peroxidase, 2,6-dimethoxyphenol, oxido; HET: HEM NAG 3DM; 1.39A {Bjerkandera adusta} PDB: 2d3q_A* 3mm2_A* 3vxi_A* 3afv_A* 3mm3_A* 3mm1_A*
Probab=23.75 E-value=13 Score=33.07 Aligned_cols=16 Identities=31% Similarity=0.584 Sum_probs=14.2
Q ss_pred ccceeeEEeecceeEe
Q 028920 89 DWLPRFIVLHGSCIFF 104 (202)
Q Consensus 89 DWlpRFVVl~G~ciff 104 (202)
+=||+||+.+|--.||
T Consensus 414 ~~l~~fv~~~GG~YFF 429 (442)
T 3vxj_A 414 FTVPLFVIPKGGEYFF 429 (442)
T ss_dssp EECCCCEEEEEEEEEE
T ss_pred cCcCCceEECceEEEc
Confidence 3599999999999888
No 124
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=23.38 E-value=30 Score=22.15 Aligned_cols=19 Identities=21% Similarity=0.256 Sum_probs=11.1
Q ss_pred hhhcChHHHHHHHHHhhhh
Q 028920 34 SELADLEDREAHLKAQLEH 52 (202)
Q Consensus 34 sEla~~eEREa~lkAqLeh 52 (202)
+.++.+|+|-+.|+++|+.
T Consensus 49 ~~~~~Le~ri~~Le~~l~~ 67 (72)
T 2er8_A 49 ARNEAIEKRFKELTRTLTN 67 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4455556666666666654
No 125
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=23.25 E-value=1.4e+02 Score=24.49 Aligned_cols=77 Identities=17% Similarity=0.239 Sum_probs=42.7
Q ss_pred cceeeEEeecceeEeeeeecCCCCCCcceeehhhhccCCCCcccCCCceEEEEEEEeecceeeeecccceeehhhHHHHh
Q 028920 90 WLPRFIVLHGSCIFFYLLSTDLSPQDSTVLSDVVEVASLPSITRENGEMQYCFYILTRHGLRIECSSISKIQVYSWLSAL 169 (202)
Q Consensus 90 WlpRFVVl~G~ciffyL~sTDLsPQdStllsDIVEVg~lP~f~rEdge~~yaFyIlTrhGLR~ECSS~skiQVdsWL~al 169 (202)
+-+|.++|--.++.|-=... .+...+...+-+..+=--...+++..++|.|.+... .|.....+.-.-+.|+.+|
T Consensus 258 ~~~r~~fLF~d~Ll~~k~~~----~~~y~~k~~i~L~~l~v~~~~~~~~~~~f~i~~~~~-~~~l~a~s~~ek~~W~~~i 332 (434)
T 3mpx_A 258 RRPRHLFLMNDVLLYTYPQK----DGKYRLKNTLAVANMKVSRPVMEKVPYALKIETSES-CLMLSASSCAERDEWYGCL 332 (434)
T ss_dssp EEEEEEEEESSEEEEEEECT----TSCEEEEEEEEC-----CCCCCTTSCSEEEEECSSC-EEEEECSSHHHHHHHHHHH
T ss_pred ceEEEEEEECCEEEEEEecC----CCeEEEEEEEEcCCcEEEecCCCCCCeeEEEecCCe-EEEEecCCHHHHHHHHHHH
Confidence 34566666666555433221 122222222222222111234456789999976544 6888888888889999988
Q ss_pred hc
Q 028920 170 QT 171 (202)
Q Consensus 170 ~~ 171 (202)
+.
T Consensus 333 ~~ 334 (434)
T 3mpx_A 333 SR 334 (434)
T ss_dssp HH
T ss_pred HH
Confidence 73
No 126
>2nvn_A Hypothetical protein; structural genomics, PSI- protein structure initiative, joint center for structural G JCSG; 2.50A {Synechococcus elongatus} SCOP: d.18.1.3
Probab=23.15 E-value=13 Score=29.13 Aligned_cols=68 Identities=24% Similarity=0.251 Sum_probs=49.3
Q ss_pred ccchhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhhhcceeEEEeeecccCCCCCCCCCCCCccccceeeEEeec
Q 028920 20 EKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSGYLYIRTRWKPLPGEPPPIDDTDVDDWLPRFIVLHG 99 (202)
Q Consensus 20 ekvelt~~EvesLRsEla~~eEREa~lkAqLehvDEvLRsarlSgYLyiRtRW~aLpgEpppiDDtdVDDWlpRFVVl~G 99 (202)
=-||||++|...+..=+..+.+--++++.|| +-.-+++.=+----=|..+.|.| ..|=.|||..+|
T Consensus 32 WAiELTe~E~~~f~~Ll~qL~~~~~~i~~eL------M~EE~I~lE~E~~~~W~eleG~~--------~~~sLr~IL~~g 97 (122)
T 2nvn_A 32 WAVELTAAEMADFCRLVQQLAETIAAIAPEL------MPEERLQIEAESALLWLEAEGFA--------DAYELRLILASD 97 (122)
T ss_dssp CEEEECHHHHHHHHHHHHHHHHHHHTSCCCS------SCSSCEEEEEECSSEEEEEEEET--------TEEEEEEEECSS
T ss_pred hheeeCHHHHHHHHHHHHHHHHHHHHHHHHh------cchhheeeeecCccEEEEeeccc--------CeeEEEEEEcCC
Confidence 3589999999999988877766555555444 44455555555555688888888 789999998876
Q ss_pred ce
Q 028920 100 SC 101 (202)
Q Consensus 100 ~c 101 (202)
-+
T Consensus 98 R~ 99 (122)
T 2nvn_A 98 RR 99 (122)
T ss_dssp SC
T ss_pred cc
Confidence 44
No 127
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=22.99 E-value=68 Score=23.21 Aligned_cols=31 Identities=13% Similarity=0.352 Sum_probs=22.9
Q ss_pred HHHHHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 028920 28 ELESLRSELADLEDREAHLKAQLEHVDEILR 58 (202)
Q Consensus 28 EvesLRsEla~~eEREa~lkAqLehvDEvLR 58 (202)
.|++|...|.+..++..++++.|.++=|+|-
T Consensus 28 ~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld 58 (79)
T 3cvf_A 28 QLRAMERSLEEARAERERARAEVGRAAQLLD 58 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566777777777777888888887777663
No 128
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=22.94 E-value=78 Score=24.32 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=30.8
Q ss_pred hHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhh----hhcceeEEEeeecccCCCC
Q 028920 25 TATELESLRSELADLEDREAHLKAQLEHVDEILRS----ARLSGYLYIRTRWKPLPGE 78 (202)
Q Consensus 25 t~~EvesLRsEla~~eEREa~lkAqLehvDEvLRs----arlSgYLyiRtRW~aLpgE 78 (202)
+..|++..+.++..++.+-+..+|+|+....-|.. |-++|++..+ ..-+|+
T Consensus 96 s~~~~~~a~~~~~~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~---~~~~G~ 150 (277)
T 2f1m_A 96 SKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKS---NVTEGA 150 (277)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCC---SSCBTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeE---EcCCCC
Confidence 44555666666666666666666777766666554 4568887543 344554
No 129
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=22.53 E-value=55 Score=27.02 Aligned_cols=35 Identities=23% Similarity=0.434 Sum_probs=26.4
Q ss_pred ccchhhHHHHHHHHhhhcChHHHHHHHHHhhhhHH
Q 028920 20 EKVELTATELESLRSELADLEDREAHLKAQLEHVD 54 (202)
Q Consensus 20 ekvelt~~EvesLRsEla~~eEREa~lkAqLehvD 54 (202)
+.++-..++++.|..+++++.++-..++|..+|+-
T Consensus 59 ~e~~~l~~~l~~l~~e~~el~d~~lR~~AEfeN~R 93 (213)
T 4ani_A 59 EELAAAKAQIAELEAKLSEMEHRYLRLYADFENFR 93 (213)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555677888888888888888888888877754
No 130
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=22.16 E-value=77 Score=23.53 Aligned_cols=42 Identities=12% Similarity=0.219 Sum_probs=33.4
Q ss_pred cccchhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhh
Q 028920 19 QEKVELTATELESLRSELADLEDREAHLKAQLEHVDEILRSA 60 (202)
Q Consensus 19 qekvelt~~EvesLRsEla~~eEREa~lkAqLehvDEvLRsa 60 (202)
.|-+++...-++.|...+..+++-.+.+++++..+-+.|+..
T Consensus 97 ~eA~~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l 138 (151)
T 2zdi_C 97 DEAISFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEV 138 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566667788888999999999999999998888888754
No 131
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=22.09 E-value=75 Score=27.90 Aligned_cols=33 Identities=30% Similarity=0.313 Sum_probs=22.4
Q ss_pred HHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHh
Q 028920 26 ATELESLRSELADLEDREAHLKAQLEHVDEILR 58 (202)
Q Consensus 26 ~~EvesLRsEla~~eEREa~lkAqLehvDEvLR 58 (202)
.+||++||.++.++++.-.+++++++.+-|-|.
T Consensus 9 ~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 41 (412)
T 3u06_A 9 STEVVHLRQRTEELLRCNEQQAAELETCKEQLF 41 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777777777777777777666666655543
No 132
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=21.94 E-value=69 Score=27.00 Aligned_cols=23 Identities=26% Similarity=0.306 Sum_probs=14.5
Q ss_pred cccchhhHHHHHHHHhhhcChHH
Q 028920 19 QEKVELTATELESLRSELADLED 41 (202)
Q Consensus 19 qekvelt~~EvesLRsEla~~eE 41 (202)
+.++|-..++.+.|+.||+.+|.
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~ 206 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQ 206 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666777777776643
No 133
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=21.25 E-value=97 Score=23.26 Aligned_cols=42 Identities=21% Similarity=0.393 Sum_probs=30.2
Q ss_pred hhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHHhhhhccee
Q 028920 24 LTATELESLRSELADLEDREAHLKAQLEHVDEILRSARLSGY 65 (202)
Q Consensus 24 lt~~EvesLRsEla~~eEREa~lkAqLehvDEvLRsarlSgY 65 (202)
+|..++.+||.||..++-=-..|+.+.+.+---|-...|-|+
T Consensus 9 ~~~e~~~~lr~ei~~Le~E~~rLr~~~~~LE~~Le~~~l~Gd 50 (100)
T 1go4_E 9 FSREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGD 50 (100)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSC
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 488999999999999986556676666666555544445554
No 134
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=21.02 E-value=60 Score=21.86 Aligned_cols=32 Identities=16% Similarity=0.291 Sum_probs=19.3
Q ss_pred cchhhHHHHHHHHhhhcChHHHHHHHHHhhhh
Q 028920 21 KVELTATELESLRSELADLEDREAHLKAQLEH 52 (202)
Q Consensus 21 kvelt~~EvesLRsEla~~eEREa~lkAqLeh 52 (202)
||.-...+|.+||+++..+.+--+.-..+|+|
T Consensus 19 kVdqLssdV~al~~~v~~ak~eA~RAN~RlDN 50 (52)
T 1jcd_A 19 KADQASNDANAARSDAQAAKDDAARANQRADN 50 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 55555667777777777665544444445544
No 135
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=20.59 E-value=56 Score=29.63 Aligned_cols=31 Identities=23% Similarity=0.248 Sum_probs=20.8
Q ss_pred cchhhHHHHHHHHhhhcChHHHHHHHHHhhh
Q 028920 21 KVELTATELESLRSELADLEDREAHLKAQLE 51 (202)
Q Consensus 21 kvelt~~EvesLRsEla~~eEREa~lkAqLe 51 (202)
.++-..+|+..|+.+|+.+|+..+.++++|.
T Consensus 117 ~~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~ 147 (501)
T 1wle_A 117 QYQSLRARGREIRKQLTLLYPKEAQLEEQFY 147 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444556777777777777777777776664
No 136
>1r8e_A Multidrug-efflux transporter regulator; protein-DNA complex, MERR-family transcription activator, MU binding protein; HET: P4P; 2.40A {Bacillus subtilis} SCOP: a.6.1.3 d.60.1.1 PDB: 1exi_A* 1exj_A* 3iao_A 3q5p_A* 3d71_A* 3q3d_A* 3q1m_A* 3q2y_A* 3q5r_A* 3q5s_A* 3d70_A 3d6z_A* 3d6y_A* 1bow_A 2bow_A*
Probab=20.22 E-value=88 Score=24.03 Aligned_cols=35 Identities=11% Similarity=0.157 Sum_probs=19.2
Q ss_pred hhhHHHHHHHHhhhcChHHHHHHHHHhhhhHHHHH
Q 028920 23 ELTATELESLRSELADLEDREAHLKAQLEHVDEIL 57 (202)
Q Consensus 23 elt~~EvesLRsEla~~eEREa~lkAqLehvDEvL 57 (202)
++.....+.|+.+++.+.+..+.|++.++.+.+..
T Consensus 82 ~~l~~~~~~l~~~i~~l~~~~~~l~~~~~~~~~~~ 116 (278)
T 1r8e_A 82 AFYTEQERQIREKLDFLSALEQTISLVKKRMKRQM 116 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44555555555555555555555555555554443
No 137
>1r8d_A Transcription activator MTAN; protein-DNA complex, transcription/DNA complex; 2.70A {Bacillus subtilis} SCOP: a.6.1.3 PDB: 1jbg_A
Probab=20.15 E-value=77 Score=22.00 Aligned_cols=23 Identities=9% Similarity=0.143 Sum_probs=8.7
Q ss_pred HHHHHHHHhhhcChHHHHHHHHH
Q 028920 26 ATELESLRSELADLEDREAHLKA 48 (202)
Q Consensus 26 ~~EvesLRsEla~~eEREa~lkA 48 (202)
....+.|..+++.+++..+.+..
T Consensus 81 ~~~~~~l~~~i~~l~~~~~~l~~ 103 (109)
T 1r8d_A 81 QSQKEILMKKKQRMDEMIQTIDR 103 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
Done!