Query 028925
Match_columns 202
No_of_seqs 132 out of 1339
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 07:11:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028925.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028925hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xn4_A Kelch-like protein 2; s 100.0 1.5E-37 5.2E-42 238.4 24.9 194 1-200 95-298 (302)
2 3ii7_A Kelch-like protein 7; p 100.0 1.5E-37 5.1E-42 238.8 23.7 195 1-200 88-293 (306)
3 1zgk_A Kelch-like ECH-associat 100.0 3.5E-37 1.2E-41 237.1 25.2 191 1-199 108-306 (308)
4 2vpj_A Kelch-like protein 12; 100.0 3.4E-37 1.2E-41 236.2 25.0 194 1-202 99-301 (301)
5 3ii7_A Kelch-like protein 7; p 100.0 4.2E-37 1.4E-41 236.3 24.2 190 1-198 42-243 (306)
6 2xn4_A Kelch-like protein 2; s 100.0 1.1E-36 3.7E-41 233.6 24.4 190 1-198 48-247 (302)
7 4asc_A Kelch repeat and BTB do 100.0 4E-37 1.4E-41 237.4 21.4 186 1-194 85-289 (315)
8 1zgk_A Kelch-like ECH-associat 100.0 9E-37 3.1E-41 234.8 23.2 191 1-198 57-258 (308)
9 2woz_A Kelch repeat and BTB do 100.0 1.2E-36 4.2E-41 235.0 22.3 186 1-194 96-299 (318)
10 4asc_A Kelch repeat and BTB do 100.0 2.2E-36 7.4E-41 233.4 23.2 192 2-198 33-239 (315)
11 2vpj_A Kelch-like protein 12; 100.0 1.3E-35 4.4E-40 227.4 26.4 190 1-198 49-249 (301)
12 2woz_A Kelch repeat and BTB do 100.0 8.4E-36 2.9E-40 230.3 22.2 192 2-198 44-249 (318)
13 2uvk_A YJHT; unknown function, 100.0 4.6E-35 1.6E-39 229.4 21.6 197 1-200 51-315 (357)
14 2uvk_A YJHT; unknown function, 100.0 9.1E-34 3.1E-38 222.0 24.0 185 1-194 6-242 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 1.2E-31 4.1E-36 226.2 21.5 177 1-186 436-641 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 8.6E-31 3E-35 221.0 21.1 192 2-200 386-605 (695)
17 1k3i_A Galactose oxidase precu 100.0 5.9E-28 2E-32 202.9 17.7 189 1-198 237-516 (656)
18 1k3i_A Galactose oxidase precu 99.9 1.6E-25 5.6E-30 188.1 17.8 190 2-200 183-464 (656)
19 3mbr_X Glutamine cyclotransfer 98.7 1.8E-05 6.2E-10 58.1 20.4 155 8-178 24-180 (243)
20 3dsm_A Uncharacterized protein 98.6 4.1E-05 1.4E-09 58.7 22.2 156 8-185 47-217 (328)
21 3nol_A Glutamine cyclotransfer 98.5 2.5E-05 8.7E-10 57.9 17.5 155 8-178 46-202 (262)
22 3nok_A Glutaminyl cyclase; bet 98.4 6.3E-05 2.2E-09 55.8 18.1 152 8-178 58-211 (268)
23 3dsm_A Uncharacterized protein 98.3 0.00019 6.6E-09 54.9 19.2 150 9-178 88-254 (328)
24 2iwa_A Glutamine cyclotransfer 98.2 0.00091 3.1E-08 49.8 19.9 155 8-178 24-182 (266)
25 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.0038 1.3E-07 48.3 21.1 155 9-186 48-215 (376)
26 3mbr_X Glutamine cyclotransfer 97.7 0.0048 1.6E-07 45.2 16.1 111 54-178 22-134 (243)
27 1l0q_A Surface layer protein; 97.5 0.0067 2.3E-07 46.8 15.5 142 15-178 2-148 (391)
28 3nok_A Glutaminyl cyclase; bet 97.5 0.0063 2.2E-07 45.1 14.1 111 7-134 98-214 (268)
29 3nol_A Glutamine cyclotransfer 97.5 0.011 3.8E-07 43.8 15.3 108 57-178 47-156 (262)
30 1l0q_A Surface layer protein; 97.5 0.013 4.5E-07 45.1 16.4 140 15-178 44-190 (391)
31 1q7f_A NHL, brain tumor CG1071 97.3 0.026 8.9E-07 41.6 20.7 148 14-178 88-239 (286)
32 2hqs_A Protein TOLB; TOLB, PAL 97.3 0.034 1.2E-06 43.8 17.5 145 31-188 247-395 (415)
33 1ri6_A Putative isomerase YBHE 97.3 0.011 3.7E-07 44.4 13.6 159 15-194 141-324 (343)
34 3vgz_A Uncharacterized protein 97.3 0.036 1.2E-06 41.8 18.9 152 14-178 52-216 (353)
35 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.03 1E-06 44.2 16.6 144 14-178 248-392 (445)
36 1rwi_B Serine/threonine-protei 97.2 0.033 1.1E-06 40.5 16.8 143 14-178 34-181 (270)
37 2hqs_A Protein TOLB; TOLB, PAL 97.2 0.034 1.2E-06 43.8 16.1 143 31-186 203-350 (415)
38 1p22_A F-BOX/WD-repeat protein 97.2 0.024 8.4E-07 44.6 15.3 148 10-178 138-286 (435)
39 2dg1_A DRP35, lactonase; beta 97.2 0.0089 3.1E-07 45.1 12.2 148 14-177 55-213 (333)
40 2qc5_A Streptogramin B lactona 97.1 0.045 1.5E-06 40.2 20.0 147 14-186 72-223 (300)
41 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.06 2.1E-06 41.4 20.6 148 9-185 183-344 (376)
42 1jmx_B Amine dehydrogenase; ox 97.1 0.0045 1.6E-07 46.7 9.9 146 12-178 8-176 (349)
43 3hfq_A Uncharacterized protein 97.0 0.039 1.3E-06 41.8 14.2 163 14-195 151-337 (347)
44 1q7f_A NHL, brain tumor CG1071 97.0 0.065 2.2E-06 39.4 19.2 147 14-178 40-195 (286)
45 2iwa_A Glutamine cyclotransfer 96.9 0.07 2.4E-06 39.6 16.3 108 57-178 25-136 (266)
46 3bws_A Protein LP49; two-domai 96.9 0.06 2.1E-06 42.0 15.5 147 14-178 133-293 (433)
47 1k8k_C P40, ARP2/3 complex 41 96.9 0.064 2.2E-06 40.7 15.2 146 14-176 19-172 (372)
48 4ery_A WD repeat-containing pr 96.9 0.078 2.7E-06 39.4 15.9 146 14-178 118-269 (312)
49 3hfq_A Uncharacterized protein 96.9 0.065 2.2E-06 40.6 14.9 137 31-176 18-170 (347)
50 1rwi_B Serine/threonine-protei 96.9 0.074 2.5E-06 38.6 17.1 143 14-178 77-223 (270)
51 2qc5_A Streptogramin B lactona 96.9 0.08 2.7E-06 38.9 22.0 146 14-186 30-181 (300)
52 3jrp_A Fusion protein of prote 96.8 0.026 9E-07 42.9 12.4 105 14-132 22-136 (379)
53 2ovr_B FBW7, F-BOX/WD repeat p 96.8 0.13 4.3E-06 40.5 17.2 151 12-178 286-443 (445)
54 4aez_A CDC20, WD repeat-contai 96.8 0.083 2.8E-06 41.0 15.2 150 14-178 228-381 (401)
55 2z2n_A Virginiamycin B lyase; 96.8 0.092 3.2E-06 38.5 22.0 146 14-186 25-176 (299)
56 2z2n_A Virginiamycin B lyase; 96.7 0.098 3.4E-06 38.3 20.2 146 14-186 67-218 (299)
57 3scy_A Hypothetical bacterial 96.7 0.12 4.2E-06 39.3 15.8 115 61-187 220-346 (361)
58 3u4y_A Uncharacterized protein 96.7 0.039 1.3E-06 41.3 12.3 141 14-177 9-160 (331)
59 2aq5_A Coronin-1A; WD40 repeat 96.7 0.15 5E-06 39.5 16.2 151 14-178 93-255 (402)
60 3azo_A Aminopeptidase; POP fam 96.7 0.092 3.1E-06 43.6 15.4 143 31-186 217-375 (662)
61 1p22_A F-BOX/WD-repeat protein 96.7 0.083 2.8E-06 41.5 14.4 143 12-178 180-326 (435)
62 3v9f_A Two-component system se 96.6 0.27 9.3E-06 41.9 18.3 145 14-186 460-617 (781)
63 3fm0_A Protein CIAO1; WDR39,SG 96.6 0.045 1.6E-06 41.7 12.2 151 14-186 27-187 (345)
64 3bws_A Protein LP49; two-domai 96.6 0.17 5.9E-06 39.3 18.7 151 14-178 223-391 (433)
65 1kb0_A Quinohemoprotein alcoho 96.6 0.27 9.4E-06 41.4 18.7 115 8-137 71-208 (677)
66 3v7d_B Cell division control p 96.6 0.2 6.8E-06 39.4 20.3 144 14-178 279-422 (464)
67 3fvz_A Peptidyl-glycine alpha- 96.5 0.17 5.9E-06 38.2 20.7 137 31-178 69-228 (329)
68 3vgz_A Uncharacterized protein 96.5 0.17 5.8E-06 38.0 18.9 145 14-178 152-304 (353)
69 1gxr_A ESG1, transducin-like e 96.5 0.17 5.9E-06 37.6 16.9 144 14-178 108-256 (337)
70 1yiq_A Quinohemoprotein alcoho 96.5 0.31 1.1E-05 41.1 17.2 118 57-185 65-199 (689)
71 3e5z_A Putative gluconolactona 96.4 0.17 5.8E-06 37.4 16.6 151 14-178 79-247 (296)
72 3v9f_A Two-component system se 96.4 0.36 1.2E-05 41.2 18.0 147 14-186 417-574 (781)
73 3v7d_B Cell division control p 96.4 0.24 8.1E-06 39.0 15.4 142 14-175 321-463 (464)
74 1kv9_A Type II quinohemoprotei 96.4 0.36 1.2E-05 40.6 18.0 114 8-136 60-195 (668)
75 2ad6_A Methanol dehydrogenase 96.4 0.33 1.1E-05 40.0 19.3 116 8-137 56-194 (571)
76 1w6s_A Methanol dehydrogenase 96.4 0.35 1.2E-05 40.2 18.0 116 8-137 56-200 (599)
77 3jrp_A Fusion protein of prote 96.4 0.11 3.8E-06 39.4 13.0 146 15-178 69-241 (379)
78 3g4e_A Regucalcin; six bladed 96.4 0.2 6.7E-06 37.3 14.8 152 31-190 73-239 (297)
79 1gxr_A ESG1, transducin-like e 96.4 0.2 6.7E-06 37.2 15.9 144 14-178 152-297 (337)
80 1kv9_A Type II quinohemoprotei 96.4 0.33 1.1E-05 40.8 16.7 118 57-185 61-194 (668)
81 4aez_A CDC20, WD repeat-contai 96.4 0.12 4E-06 40.1 13.3 133 31-178 113-249 (401)
82 3no2_A Uncharacterized protein 96.3 0.2 6.8E-06 37.1 18.0 167 14-196 87-270 (276)
83 3dwl_C Actin-related protein 2 96.3 0.0068 2.3E-07 46.5 6.0 147 14-177 22-177 (377)
84 3ow8_A WD repeat-containing pr 96.3 0.22 7.5E-06 37.5 14.9 133 32-178 145-280 (321)
85 4aow_A Guanine nucleotide-bind 96.3 0.13 4.5E-06 38.4 13.1 136 32-178 196-338 (340)
86 4ery_A WD repeat-containing pr 96.3 0.23 7.7E-06 36.9 17.4 145 14-178 34-181 (312)
87 2aq5_A Coronin-1A; WD40 repeat 96.2 0.23 7.8E-06 38.4 14.2 144 16-178 145-300 (402)
88 3c5m_A Oligogalacturonate lyas 96.2 0.28 9.6E-06 37.4 16.1 148 31-186 216-390 (396)
89 1npe_A Nidogen, entactin; glyc 96.1 0.24 8.2E-06 36.1 22.1 146 14-178 90-239 (267)
90 2ojh_A Uncharacterized protein 96.1 0.24 8.3E-06 35.8 15.9 145 32-186 63-212 (297)
91 3ott_A Two-component system se 96.1 0.4 1.4E-05 40.7 16.1 138 14-177 482-626 (758)
92 1got_B GT-beta; complex (GTP-b 96.1 0.32 1.1E-05 36.8 15.1 132 32-178 165-302 (340)
93 3u4y_A Uncharacterized protein 96.0 0.3 1E-05 36.4 14.9 147 15-178 52-208 (331)
94 1pjx_A Dfpase, DIISOPROPYLFLUO 96.0 0.14 4.6E-06 38.0 11.7 146 14-176 28-206 (314)
95 3hrp_A Uncharacterized protein 96.0 0.41 1.4E-05 37.6 16.4 145 14-177 141-298 (409)
96 2hes_X YDR267CP; beta-propelle 96.0 0.15 5E-06 38.6 11.9 153 14-186 118-286 (330)
97 4gga_A P55CDC, cell division c 96.0 0.33 1.1E-05 37.8 14.3 96 31-134 125-222 (420)
98 1yiq_A Quinohemoprotein alcoho 95.9 0.64 2.2E-05 39.3 18.7 113 9-136 65-200 (689)
99 3ow8_A WD repeat-containing pr 95.9 0.36 1.2E-05 36.3 14.7 134 31-178 102-238 (321)
100 3e5z_A Putative gluconolactona 95.9 0.3 1E-05 36.0 13.0 138 16-176 41-201 (296)
101 4gqb_B Methylosome protein 50; 95.9 0.21 7.3E-06 38.1 12.4 134 32-178 104-247 (344)
102 1kb0_A Quinohemoprotein alcoho 95.9 0.41 1.4E-05 40.3 15.0 119 57-186 72-207 (677)
103 4a2l_A BT_4663, two-component 95.8 0.75 2.6E-05 39.3 18.8 145 14-186 98-250 (795)
104 3ei3_B DNA damage-binding prot 95.8 0.42 1.5E-05 36.5 14.6 141 16-177 87-236 (383)
105 1pby_B Quinohemoprotein amine 95.8 0.37 1.3E-05 35.7 13.7 131 31-178 11-164 (337)
106 1su3_A Interstitial collagenas 95.8 0.4 1.4E-05 38.4 14.0 144 9-178 267-433 (450)
107 1got_B GT-beta; complex (GTP-b 95.8 0.42 1.4E-05 36.1 14.5 144 14-178 66-216 (340)
108 1pgu_A Actin interacting prote 95.8 0.6 2E-05 37.9 16.5 130 31-177 467-614 (615)
109 4ggc_A P55CDC, cell division c 95.8 0.37 1.3E-05 35.4 14.3 135 31-178 45-182 (318)
110 2ynn_A Coatomer subunit beta'; 95.8 0.16 5.4E-06 37.8 11.2 145 14-177 24-172 (304)
111 4e54_B DNA damage-binding prot 95.8 0.091 3.1E-06 41.4 10.3 143 14-178 131-283 (435)
112 2fp8_A Strictosidine synthase; 95.8 0.42 1.4E-05 35.9 14.4 134 31-178 165-314 (322)
113 3iuj_A Prolyl endopeptidase; h 95.8 0.74 2.5E-05 38.7 16.8 144 31-187 259-412 (693)
114 3lrv_A PRE-mRNA-splicing facto 95.7 0.22 7.4E-06 37.7 11.9 154 14-185 138-299 (343)
115 1erj_A Transcriptional repress 95.7 0.52 1.8E-05 36.4 15.2 145 14-177 134-287 (393)
116 1qhu_A Protein (hemopexin); be 95.7 0.46 1.6E-05 38.1 13.9 136 14-177 158-331 (460)
117 4gqb_B Methylosome protein 50; 95.7 0.19 6.4E-06 38.5 11.4 142 16-178 183-332 (344)
118 2ghs_A AGR_C_1268P; regucalcin 95.6 0.5 1.7E-05 35.6 13.8 137 14-176 60-209 (326)
119 3fm0_A Protein CIAO1; WDR39,SG 95.6 0.17 5.8E-06 38.4 10.8 110 14-137 72-188 (345)
120 1vyh_C Platelet-activating fac 95.6 0.28 9.7E-06 38.2 12.3 142 14-178 119-266 (410)
121 3ei3_B DNA damage-binding prot 95.6 0.56 1.9E-05 35.8 13.8 143 15-178 131-283 (383)
122 3bg1_A Protein SEC13 homolog; 95.5 0.18 6.1E-06 37.8 10.7 109 14-136 24-143 (316)
123 1pex_A Collagenase-3, MMP-13; 95.5 0.41 1.4E-05 34.0 16.4 143 10-178 29-193 (207)
124 4g56_B MGC81050 protein; prote 95.4 0.11 3.9E-06 39.8 9.4 131 32-177 205-343 (357)
125 2pbi_B Guanine nucleotide-bind 95.4 0.63 2.1E-05 35.4 15.1 135 31-178 176-316 (354)
126 4a2l_A BT_4663, two-component 95.4 1.1 3.9E-05 38.2 19.0 143 14-186 462-620 (795)
127 1yr2_A Prolyl oligopeptidase; 95.4 0.87 3E-05 38.6 15.3 144 30-186 293-447 (741)
128 2pm7_B Protein transport prote 95.4 0.56 1.9E-05 34.6 14.0 104 14-131 20-133 (297)
129 2dg1_A DRP35, lactonase; beta 95.4 0.47 1.6E-05 35.5 12.5 115 61-186 54-177 (333)
130 3azo_A Aminopeptidase; POP fam 95.3 0.79 2.7E-05 37.9 14.8 150 30-186 160-331 (662)
131 3zwl_B Eukaryotic translation 95.3 0.45 1.5E-05 35.7 12.4 103 14-131 43-152 (369)
132 3zwl_B Eukaryotic translation 95.3 0.6 2.1E-05 35.0 13.0 144 14-178 186-347 (369)
133 1flg_A Protein (quinoprotein e 95.3 1 3.5E-05 37.2 18.5 113 9-136 63-201 (582)
134 2pbi_B Guanine nucleotide-bind 95.3 0.7 2.4E-05 35.2 13.8 102 15-132 210-317 (354)
135 3jro_A Fusion protein of prote 95.3 0.3 1E-05 41.6 12.2 104 14-131 20-133 (753)
136 1ri6_A Putative isomerase YBHE 95.3 0.45 1.5E-05 35.3 12.2 144 15-177 5-160 (343)
137 2bkl_A Prolyl endopeptidase; m 95.3 0.71 2.4E-05 38.7 14.4 146 30-186 251-403 (695)
138 4g56_B MGC81050 protein; prote 95.2 0.14 4.8E-06 39.2 9.3 144 14-178 150-302 (357)
139 4e54_B DNA damage-binding prot 95.2 0.24 8.3E-06 38.9 10.8 105 14-132 176-284 (435)
140 2ad6_A Methanol dehydrogenase 95.2 0.84 2.9E-05 37.6 14.4 120 57-186 57-193 (571)
141 3pe7_A Oligogalacturonate lyas 95.2 0.75 2.6E-05 35.0 15.7 148 30-183 215-387 (388)
142 2vdu_B TRNA (guanine-N(7)-)-me 95.2 0.88 3E-05 35.8 19.1 150 15-184 210-397 (450)
143 3vl1_A 26S proteasome regulato 95.2 0.81 2.8E-05 35.2 18.5 105 14-134 108-216 (420)
144 3scy_A Hypothetical bacterial 95.1 0.77 2.6E-05 34.8 14.8 111 16-131 14-130 (361)
145 3tc9_A Hypothetical hydrolase; 95.1 0.51 1.7E-05 37.4 12.4 144 14-176 149-300 (430)
146 2xdw_A Prolyl endopeptidase; a 95.1 1.3 4.5E-05 37.2 16.6 138 30-178 258-415 (710)
147 3f3f_A Nucleoporin SEH1; struc 95.1 0.7 2.4E-05 34.1 13.5 31 154-189 317-347 (351)
148 1nir_A Nitrite reductase; hemo 95.0 0.59 2E-05 38.2 12.9 141 31-178 302-459 (543)
149 1r5m_A SIR4-interacting protei 95.0 0.64 2.2E-05 35.6 12.7 143 15-178 217-362 (425)
150 4a11_B DNA excision repair pro 95.0 0.27 9.4E-06 37.5 10.5 145 14-178 55-219 (408)
151 3frx_A Guanine nucleotide-bind 95.0 0.79 2.7E-05 34.2 15.0 142 14-178 76-228 (319)
152 1sq9_A Antiviral protein SKI8; 95.0 0.58 2E-05 35.7 12.2 148 16-178 82-268 (397)
153 3sfz_A APAF-1, apoptotic pepti 94.9 0.68 2.3E-05 41.4 13.9 143 14-178 626-775 (1249)
154 3jro_A Fusion protein of prote 94.9 0.39 1.3E-05 40.8 11.8 146 15-178 67-239 (753)
155 3mkq_A Coatomer beta'-subunit; 94.8 0.76 2.6E-05 38.9 13.5 145 14-178 24-173 (814)
156 3sfz_A APAF-1, apoptotic pepti 94.8 0.44 1.5E-05 42.6 12.4 145 14-178 972-1117(1249)
157 3no2_A Uncharacterized protein 94.7 0.88 3E-05 33.5 16.4 144 14-176 4-154 (276)
158 2pm9_A Protein WEB1, protein t 94.7 0.97 3.3E-05 34.6 13.0 147 15-178 178-338 (416)
159 3odt_A Protein DOA1; ubiquitin 94.6 0.92 3.1E-05 33.1 15.2 149 14-189 154-305 (313)
160 3g4e_A Regucalcin; six bladed 94.5 1 3.4E-05 33.3 12.8 105 62-177 24-139 (297)
161 3fvz_A Peptidyl-glycine alpha- 94.5 1.1 3.7E-05 33.7 22.8 150 14-178 101-278 (329)
162 3mmy_A MRNA export factor; mRN 94.5 1.1 3.7E-05 33.5 13.8 141 15-177 54-199 (368)
163 1vyh_C Platelet-activating fac 94.5 1.3 4.4E-05 34.4 14.3 145 14-178 203-370 (410)
164 2pm9_A Protein WEB1, protein t 94.5 0.41 1.4E-05 36.8 10.3 151 14-178 78-250 (416)
165 1pby_B Quinohemoprotein amine 94.5 1 3.6E-05 33.2 12.8 111 15-135 46-168 (337)
166 1n7d_A LDL receptor, low-densi 94.5 0.88 3E-05 38.5 12.9 145 14-178 464-615 (699)
167 2fp8_A Strictosidine synthase; 94.4 1.1 3.9E-05 33.4 15.3 132 31-177 40-216 (322)
168 1r5m_A SIR4-interacting protei 94.4 0.94 3.2E-05 34.6 12.1 141 14-178 119-279 (425)
169 1npe_A Nidogen, entactin; glyc 94.3 1 3.6E-05 32.6 18.9 145 14-178 47-199 (267)
170 3vl1_A 26S proteasome regulato 94.3 1.4 4.7E-05 33.9 15.8 64 109-178 258-323 (420)
171 1nir_A Nitrite reductase; hemo 94.2 1.9 6.5E-05 35.2 15.9 151 31-190 248-417 (543)
172 3oyo_A Hemopexin fold protein 94.2 1 3.5E-05 32.4 11.1 60 109-176 127-197 (225)
173 3i2n_A WD repeat-containing pr 94.2 1 3.5E-05 33.6 11.8 103 14-130 128-243 (357)
174 2z3z_A Dipeptidyl aminopeptida 94.2 2.1 7.2E-05 35.7 15.4 139 30-178 283-436 (706)
175 2xbg_A YCF48-like protein; pho 94.2 1.4 4.6E-05 33.4 17.3 133 37-189 21-160 (327)
176 1k8k_C P40, ARP2/3 complex 41 94.1 1.3 4.6E-05 33.2 12.3 102 14-129 63-172 (372)
177 3dr2_A Exported gluconolactona 94.0 1.3 4.6E-05 32.7 12.9 102 30-138 168-275 (305)
178 1itv_A MMP9; adaptive molecula 94.0 1.1 3.7E-05 31.5 16.3 141 10-178 12-175 (195)
179 2z3z_A Dipeptidyl aminopeptida 94.0 2.4 8.1E-05 35.4 16.9 147 30-186 234-397 (706)
180 1qhu_A Protein (hemopexin); be 93.9 0.38 1.3E-05 38.6 9.0 96 61-177 268-385 (460)
181 2ojh_A Uncharacterized protein 93.9 1.2 4.3E-05 31.9 16.0 157 14-186 95-264 (297)
182 1pgu_A Actin interacting prote 93.7 2.3 7.8E-05 34.4 15.2 143 17-178 175-329 (615)
183 1yfq_A Cell cycle arrest prote 93.7 1.5 5.2E-05 32.5 13.0 100 14-130 67-179 (342)
184 1w6s_A Methanol dehydrogenase 93.7 1.7 5.9E-05 36.0 13.0 121 56-186 56-199 (599)
185 4hw6_A Hypothetical protein, I 93.7 2.1 7.1E-05 33.9 14.3 143 15-176 153-303 (433)
186 3bg1_A Protein SEC13 homolog; 93.7 0.83 2.8E-05 34.1 10.4 77 111-196 229-310 (316)
187 3dwl_C Actin-related protein 2 93.7 0.22 7.5E-06 37.9 7.2 104 14-131 66-178 (377)
188 3iz6_a 40S ribosomal protein R 93.7 1.8 6.3E-05 33.1 16.5 147 14-178 217-376 (380)
189 2hz6_A Endoplasmic reticulum t 93.7 0.048 1.6E-06 42.3 3.4 142 12-185 7-156 (369)
190 3b7f_A Glycosyl hydrolase, BNR 93.6 2 6.7E-05 33.3 15.1 141 33-187 33-215 (394)
191 3gre_A Serine/threonine-protei 93.6 2 6.9E-05 33.3 16.2 148 14-178 181-360 (437)
192 3v65_B Low-density lipoprotein 93.3 2.3 7.7E-05 33.0 19.3 144 14-178 127-278 (386)
193 1erj_A Transcriptional repress 93.3 2.2 7.4E-05 32.9 13.0 102 62-178 134-239 (393)
194 2vdu_B TRNA (guanine-N(7)-)-me 93.2 2.4 8.3E-05 33.2 15.2 64 63-134 210-275 (450)
195 3i2n_A WD repeat-containing pr 93.2 2 6.7E-05 32.0 16.8 148 16-178 32-200 (357)
196 3dr2_A Exported gluconolactona 93.2 1.9 6.6E-05 31.9 16.0 138 32-178 108-268 (305)
197 2ecf_A Dipeptidyl peptidase IV 93.1 3.4 0.00012 34.6 15.8 114 14-137 47-188 (741)
198 3mmy_A MRNA export factor; mRN 93.0 2.1 7.2E-05 31.9 14.6 104 14-132 97-201 (368)
199 3c7x_A Matrix metalloproteinas 93.0 1.7 5.7E-05 30.5 11.7 142 10-178 11-176 (196)
200 1n7d_A LDL receptor, low-densi 92.9 2.1 7.1E-05 36.3 12.4 105 61-178 463-572 (699)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 92.9 2 7E-05 31.4 18.8 151 15-178 83-257 (314)
202 2bkl_A Prolyl endopeptidase; m 92.8 3.8 0.00013 34.3 16.3 141 31-177 202-351 (695)
203 2pm7_B Protein transport prote 92.8 2.1 7.3E-05 31.4 12.5 63 15-90 67-133 (297)
204 3mkq_A Coatomer beta'-subunit; 92.7 4 0.00014 34.4 15.1 146 14-178 66-218 (814)
205 4ggc_A P55CDC, cell division c 92.7 2.1 7.3E-05 31.2 13.6 92 80-177 221-315 (318)
206 3ba0_A Macrophage metalloelast 92.7 2.8 9.6E-05 32.5 14.5 143 10-178 186-351 (365)
207 3pe7_A Oligogalacturonate lyas 92.6 2.6 8.8E-05 32.0 13.2 151 32-187 103-280 (388)
208 3c5m_A Oligogalacturonate lyas 92.6 2.6 8.8E-05 31.9 13.7 145 31-186 168-335 (396)
209 2hes_X YDR267CP; beta-propelle 92.6 2.5 8.5E-05 31.6 15.3 148 17-186 26-190 (330)
210 4aow_A Guanine nucleotide-bind 92.5 2.4 8.1E-05 31.3 13.8 61 111-178 186-247 (340)
211 1flg_A Protein (quinoprotein e 92.5 4 0.00014 33.7 15.0 118 57-185 63-200 (582)
212 3ott_A Two-component system se 92.4 4.5 0.00015 34.3 20.0 146 14-188 73-228 (758)
213 1ijq_A LDL receptor, low-densi 92.4 2.6 9E-05 31.6 23.9 145 14-178 88-239 (316)
214 3p5b_L Low density lipoprotein 92.4 3.2 0.00011 32.4 21.6 145 14-178 170-321 (400)
215 3m0c_C LDL receptor, low-densi 92.3 5 0.00017 34.6 22.5 145 14-178 482-633 (791)
216 3frx_A Guanine nucleotide-bind 92.3 2.6 9E-05 31.3 11.9 132 32-177 177-317 (319)
217 4gga_A P55CDC, cell division c 92.2 3.2 0.00011 32.1 15.1 92 80-177 301-395 (420)
218 3lrv_A PRE-mRNA-splicing facto 92.2 2.8 9.7E-05 31.4 14.7 146 13-178 46-202 (343)
219 4a11_B DNA excision repair pro 92.1 3 0.0001 31.6 13.4 147 14-178 111-277 (408)
220 2xdw_A Prolyl endopeptidase; a 92.1 3.8 0.00013 34.4 13.1 151 31-186 151-329 (710)
221 3dm0_A Maltose-binding peripla 92.0 4.7 0.00016 33.6 15.6 144 14-178 441-593 (694)
222 3c7x_A Matrix metalloproteinas 91.9 2.3 7.9E-05 29.8 10.8 106 7-132 54-177 (196)
223 2ecf_A Dipeptidyl peptidase IV 91.8 3.1 0.00011 34.8 12.2 57 31-96 129-188 (741)
224 1itv_A MMP9; adaptive molecula 91.6 2.5 8.5E-05 29.6 10.3 101 14-134 64-178 (195)
225 1sq9_A Antiviral protein SKI8; 91.6 3.5 0.00012 31.2 16.0 105 11-130 22-157 (397)
226 1jmx_B Amine dehydrogenase; ox 91.5 1.7 5.7E-05 32.3 9.5 67 61-135 9-79 (349)
227 1gen_A Gelatinase A; hydrolase 91.5 2.8 9.7E-05 29.9 14.2 137 10-178 36-203 (218)
228 2p4o_A Hypothetical protein; p 91.4 3.3 0.00011 30.7 13.7 103 62-177 42-147 (306)
229 1pex_A Collagenase-3, MMP-13; 91.3 2.8 9.7E-05 29.6 13.3 102 14-135 79-197 (207)
230 1qks_A Cytochrome CD1 nitrite 91.3 2.1 7E-05 35.3 10.3 141 31-178 320-478 (567)
231 3lp9_A LS-24; SEED albumin, pl 91.2 1 3.5E-05 32.4 7.5 102 60-178 70-202 (227)
232 3oyo_A Hemopexin fold protein 90.9 3.3 0.00011 29.7 12.3 103 7-129 63-197 (225)
233 3lp9_A LS-24; SEED albumin, pl 90.8 0.79 2.7E-05 33.0 6.6 100 12-131 70-202 (227)
234 3dm0_A Maltose-binding peripla 90.7 6.6 0.00022 32.7 13.9 94 32-134 542-636 (694)
235 3v64_C Agrin; beta propeller, 90.6 4.5 0.00016 30.8 19.7 143 14-178 84-235 (349)
236 3iuj_A Prolyl endopeptidase; h 90.6 6.9 0.00024 32.8 16.5 167 14-186 139-323 (693)
237 3k26_A Polycomb protein EED; W 90.6 3.9 0.00013 30.4 10.8 101 15-132 85-194 (366)
238 2ynn_A Coatomer subunit beta'; 90.1 4.4 0.00015 29.8 14.6 104 14-132 66-174 (304)
239 3hxj_A Pyrrolo-quinoline quino 89.9 4.6 0.00016 29.7 12.7 84 62-161 225-312 (330)
240 4h5i_A Guanine nucleotide-exch 89.9 5.3 0.00018 30.4 16.6 148 33-190 199-359 (365)
241 3hxj_A Pyrrolo-quinoline quino 89.8 4.7 0.00016 29.7 13.7 93 62-176 187-283 (330)
242 1k32_A Tricorn protease; prote 89.8 10 0.00035 33.5 15.6 141 32-186 318-467 (1045)
243 3p5b_L Low density lipoprotein 89.7 6 0.00021 30.8 19.6 105 61-178 169-278 (400)
244 3o4h_A Acylamino-acid-releasin 89.5 7.4 0.00025 31.6 13.6 94 82-184 134-231 (582)
245 1hxn_A Hemopexin, HPX; heme, b 89.4 4.5 0.00015 28.9 12.2 134 13-177 27-197 (219)
246 3hrp_A Uncharacterized protein 89.2 6.6 0.00023 30.6 18.6 144 14-175 230-408 (409)
247 3k26_A Polycomb protein EED; W 89.2 5.4 0.00018 29.6 17.7 105 63-178 85-193 (366)
248 3v65_B Low-density lipoprotein 88.5 7.2 0.00025 30.1 20.8 143 14-178 170-319 (386)
249 2xyi_A Probable histone-bindin 88.5 5 0.00017 31.2 10.2 60 109-177 243-309 (430)
250 1su3_A Interstitial collagenas 88.5 5 0.00017 32.1 10.1 103 14-136 318-438 (450)
251 3m0c_C LDL receptor, low-densi 88.4 11 0.00039 32.3 20.0 143 14-178 435-590 (791)
252 2ghs_A AGR_C_1268P; regucalcin 88.0 6.9 0.00023 29.3 17.3 147 13-178 99-261 (326)
253 1ck7_A Protein (gelatinase A); 88.0 5.7 0.00019 33.2 10.4 143 10-178 449-616 (631)
254 2xbg_A YCF48-like protein; pho 87.9 7 0.00024 29.3 22.0 148 14-188 46-201 (327)
255 2p9w_A MAL S 1 allergenic prot 87.8 7.7 0.00026 29.7 12.3 136 14-163 147-304 (334)
256 1ijq_A LDL receptor, low-densi 87.8 7 0.00024 29.2 22.0 143 14-178 41-196 (316)
257 3ba0_A Macrophage metalloelast 87.8 8.1 0.00028 29.9 13.2 102 14-135 236-355 (365)
258 2xyi_A Probable histone-bindin 87.7 7 0.00024 30.4 10.6 101 62-177 243-353 (430)
259 1yfq_A Cell cycle arrest prote 87.3 7.1 0.00024 28.7 13.6 102 14-130 22-131 (342)
260 2p4o_A Hypothetical protein; p 87.2 7.4 0.00025 28.7 19.1 146 14-177 42-198 (306)
261 2ymu_A WD-40 repeat protein; u 86.9 11 0.00036 30.3 15.1 101 62-177 437-539 (577)
262 3iz6_a 40S ribosomal protein R 86.1 9.6 0.00033 29.0 14.9 137 31-178 180-330 (380)
263 4h5i_A Guanine nucleotide-exch 84.7 11 0.00038 28.6 14.6 136 31-178 157-301 (365)
264 3sjl_D Methylamine dehydrogena 84.1 3.3 0.00011 32.4 6.9 72 14-93 291-367 (386)
265 3odt_A Protein DOA1; ubiquitin 83.9 10 0.00034 27.4 17.3 101 62-178 154-256 (313)
266 1nr0_A Actin interacting prote 83.1 18 0.00061 29.6 17.6 145 14-178 201-356 (611)
267 2xzm_R RACK1; ribosome, transl 82.8 13 0.00044 27.7 14.2 52 31-90 98-150 (343)
268 3ei3_A DNA damage-binding prot 82.7 27 0.00093 31.5 13.4 136 30-177 863-1001(1158)
269 3ju4_A Endo-N-acetylneuraminid 82.7 16 0.00056 29.0 15.6 110 6-117 285-405 (670)
270 2mad_H Methylamine dehydrogena 82.0 15 0.00053 28.1 13.8 74 62-136 278-356 (373)
271 3f3f_A Nucleoporin SEH1; struc 81.9 13 0.00043 27.1 15.5 105 14-132 22-145 (351)
272 1nr0_A Actin interacting prote 81.8 20 0.00069 29.3 14.3 66 62-135 201-275 (611)
273 1k32_A Tricorn protease; prote 81.3 17 0.00057 32.1 11.0 99 31-137 358-468 (1045)
274 3dw8_B Serine/threonine-protei 81.2 16 0.00053 28.1 9.9 60 62-130 237-315 (447)
275 3sov_A LRP-6, low-density lipo 80.8 16 0.00054 27.4 22.0 143 14-178 90-239 (318)
276 3v64_C Agrin; beta propeller, 80.5 17 0.00057 27.6 23.3 143 14-178 127-276 (349)
277 4hw6_A Hypothetical protein, I 80.4 19 0.00066 28.3 15.0 64 108-176 353-432 (433)
278 1qks_A Cytochrome CD1 nitrite 80.3 23 0.00079 29.1 16.3 103 14-133 166-278 (567)
279 1gen_A Gelatinase A; hydrolase 80.2 13 0.00046 26.3 10.7 99 14-132 87-204 (218)
280 1hxn_A Hemopexin, HPX; heme, b 79.9 14 0.00048 26.3 9.2 98 12-129 70-196 (219)
281 4a0p_A LRP6, LRP-6, low-densit 79.8 25 0.00086 29.3 17.6 142 14-177 48-197 (628)
282 3kya_A Putative phosphatase; s 79.0 24 0.00083 28.5 12.9 107 14-129 151-277 (496)
283 2gop_A Trilobed protease; beta 78.0 18 0.00063 26.6 12.6 137 30-186 42-213 (347)
284 3c75_H MADH, methylamine dehyd 77.2 18 0.00063 28.5 9.1 116 14-133 84-212 (426)
285 3c75_H MADH, methylamine dehyd 77.0 23 0.00078 28.0 9.6 111 62-178 84-210 (426)
286 4hvt_A Ritya.17583.B, post-pro 76.8 34 0.0012 29.1 16.1 149 31-189 269-438 (711)
287 1xfd_A DIP, dipeptidyl aminope 76.8 31 0.0011 28.6 11.9 57 80-136 228-295 (723)
288 2ece_A 462AA long hypothetical 74.8 31 0.0011 27.7 11.2 70 14-91 95-175 (462)
289 2mad_H Methylamine dehydrogena 74.4 27 0.00092 26.8 9.9 73 14-94 278-355 (373)
290 1z68_A Fibroblast activation p 73.7 38 0.0013 28.1 13.8 158 14-178 263-444 (719)
291 3gre_A Serine/threonine-protei 73.5 28 0.00097 26.6 10.3 26 106-132 336-361 (437)
292 3o4h_A Acylamino-acid-releasin 73.3 35 0.0012 27.5 16.8 97 80-186 90-190 (582)
293 2oaj_A Protein SNI1; WD40 repe 72.6 48 0.0016 28.8 14.8 105 14-134 28-133 (902)
294 3sjl_D Methylamine dehydrogena 72.3 32 0.0011 26.8 11.1 74 62-136 291-369 (386)
295 3sov_A LRP-6, low-density lipo 72.0 28 0.00097 26.0 17.9 143 14-178 46-198 (318)
296 4a0p_A LRP6, LRP-6, low-densit 71.7 43 0.0015 27.9 20.1 141 14-178 91-238 (628)
297 2xe4_A Oligopeptidase B; hydro 71.4 43 0.0015 28.4 10.6 117 14-137 330-465 (751)
298 1yr2_A Prolyl oligopeptidase; 69.9 49 0.0017 27.8 18.7 142 31-178 243-396 (741)
299 1jof_A Carboxy-CIS,CIS-muconat 69.8 33 0.0011 25.8 14.0 67 109-178 265-342 (365)
300 3s94_A LRP-6, low-density lipo 69.1 48 0.0017 27.5 18.5 145 14-178 360-511 (619)
301 2ymu_A WD-40 repeat protein; u 69.0 42 0.0014 26.7 16.0 101 62-177 314-416 (577)
302 3dw8_B Serine/threonine-protei 68.5 37 0.0013 25.9 12.8 29 108-137 352-380 (447)
303 3tc9_A Hypothetical hydrolase; 68.4 41 0.0014 26.3 12.6 100 62-178 149-258 (430)
304 2b4w_A Hypothetical protein, c 68.2 22 0.00074 26.5 6.8 59 12-71 38-98 (315)
305 2xe4_A Oligopeptidase B; hydro 66.1 61 0.0021 27.5 16.2 146 30-186 294-464 (751)
306 3qhy_B Beta-lactamase inhibito 64.5 39 0.0013 24.7 10.8 16 7-22 34-49 (282)
307 2qe8_A Uncharacterized protein 64.1 42 0.0014 25.0 14.7 118 62-186 27-161 (343)
308 3vu4_A KMHSV2; beta-propeller 64.1 43 0.0015 25.0 18.1 65 109-178 206-272 (355)
309 2xzm_R RACK1; ribosome, transl 63.3 43 0.0015 24.8 17.6 62 62-131 87-150 (343)
310 2j04_A TAU60, YPL007P, hypothe 62.7 66 0.0022 26.7 14.6 107 13-137 139-261 (588)
311 2oiz_A Aromatic amine dehydrog 59.7 42 0.0014 25.3 7.7 65 14-90 265-335 (361)
312 1ck7_A Protein (gelatinase A); 59.3 15 0.00052 30.7 5.3 99 14-132 500-617 (631)
313 2hz6_A Endoplasmic reticulum t 57.9 29 0.00098 26.4 6.4 62 106-178 6-69 (369)
314 2oit_A Nucleoporin 214KDA; NH2 57.3 67 0.0023 25.0 13.5 119 63-189 162-293 (434)
315 2be1_A Serine/threonine-protei 56.8 63 0.0022 24.6 8.5 67 62-136 55-138 (339)
316 2oit_A Nucleoporin 214KDA; NH2 56.8 68 0.0023 25.0 13.9 60 15-89 162-223 (434)
317 3sre_A PON1, serum paraoxonase 56.4 65 0.0022 24.7 14.8 152 14-177 60-252 (355)
318 1fwx_A Nitrous oxide reductase 56.2 24 0.00081 29.3 5.9 148 31-190 254-441 (595)
319 4hvt_A Ritya.17583.B, post-pro 54.4 1E+02 0.0034 26.2 11.1 121 10-137 295-436 (711)
320 4gq1_A NUP37; propeller, trans 54.3 69 0.0024 24.3 9.8 63 62-132 155-220 (393)
321 2cn3_A Xyloglucanase, beta-1,4 53.2 1E+02 0.0036 26.0 11.2 76 111-191 212-294 (737)
322 3b7f_A Glycosyl hydrolase, BNR 53.1 73 0.0025 24.2 20.5 156 15-193 190-386 (394)
323 2j04_A TAU60, YPL007P, hypothe 51.9 1E+02 0.0035 25.6 17.0 141 14-178 96-255 (588)
324 1sqj_A OXG-RCBH, oligoxylogluc 51.8 1.1E+02 0.0039 26.1 17.1 136 40-190 3-162 (789)
325 2oiz_A Aromatic amine dehydrog 51.3 75 0.0026 23.9 9.4 72 62-137 265-341 (361)
326 3ju4_A Endo-N-acetylneuraminid 51.3 92 0.0032 24.9 18.1 122 40-164 269-407 (670)
327 2oaj_A Protein SNI1; WD40 repe 50.3 1.3E+02 0.0043 26.2 15.8 133 31-178 79-243 (902)
328 4a5s_A Dipeptidyl peptidase 4 49.6 88 0.003 26.2 8.6 113 14-136 27-147 (740)
329 2qe8_A Uncharacterized protein 47.4 84 0.0029 23.3 13.8 117 14-136 27-161 (343)
330 3ei3_A DNA damage-binding prot 41.5 2E+02 0.0069 26.0 18.1 153 31-194 807-971 (1158)
331 1mda_H Methylamine dehydrogena 41.5 1.2E+02 0.004 23.3 8.4 69 62-133 31-108 (368)
332 1sqj_A OXG-RCBH, oligoxylogluc 39.4 1.8E+02 0.0062 24.9 16.0 75 109-187 241-340 (789)
333 3a0f_A Xyloglucanase; beta-pro 38.9 1.8E+02 0.0062 24.7 15.7 29 109-137 256-291 (763)
334 3vu4_A KMHSV2; beta-propeller 38.4 1.2E+02 0.0041 22.5 15.4 62 62-131 206-272 (355)
335 2w18_A PALB2, fancn, partner a 37.2 1.4E+02 0.0048 22.9 19.3 148 15-175 193-355 (356)
336 2gop_A Trilobed protease; beta 36.2 1.2E+02 0.0042 22.0 15.7 128 30-174 199-330 (347)
337 2ydt_A EXO-1,5-alpha-L-arabino 35.6 1.5E+02 0.0051 22.8 7.5 53 109-164 287-344 (367)
338 2ece_A 462AA long hypothetical 32.9 1.9E+02 0.0065 23.2 14.2 108 63-178 96-238 (462)
339 4d9s_A UVB-resistance protein 31.0 1.3E+02 0.0046 23.1 6.4 16 7-22 235-251 (406)
340 3syx_A Sprouty-related, EVH1 d 30.0 93 0.0032 20.1 4.4 18 31-48 18-35 (130)
341 1jof_A Carboxy-CIS,CIS-muconat 28.2 1.8E+02 0.0063 21.5 13.0 24 109-133 321-344 (365)
342 1mda_H Methylamine dehydrogena 28.0 2E+02 0.0069 21.9 10.6 113 14-130 31-158 (368)
343 1xfd_A DIP, dipeptidyl aminope 27.3 2.6E+02 0.0088 23.0 14.8 31 14-46 265-295 (723)
344 2lyd_A Decapping protein 1; DC 26.8 1.3E+02 0.0045 19.4 5.2 18 120-137 37-54 (134)
345 3a72_A EXO-arabinanase; arabin 26.6 1.3E+02 0.0046 22.9 5.6 53 109-164 279-336 (355)
346 2cn3_A Xyloglucanase, beta-1,4 26.4 2.9E+02 0.01 23.3 17.7 101 82-186 224-343 (737)
347 3dqy_A Toluene 1,2-dioxygenase 25.9 1.1E+02 0.0039 18.3 4.8 36 32-68 64-99 (106)
348 3gce_A Ferredoxin component of 24.8 1.3E+02 0.0045 18.7 4.5 37 32-69 75-111 (121)
349 1ddw_A GLGF-domain protein hom 23.7 57 0.002 20.7 2.5 18 31-48 11-29 (120)
350 2de6_D Ferredoxin component of 21.4 1.5E+02 0.0051 18.1 4.3 36 33-69 69-104 (115)
No 1
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=238.35 Aligned_cols=194 Identities=21% Similarity=0.381 Sum_probs=165.4
Q ss_pred CCccccceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcc
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSK 80 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~ 80 (202)
||.+|..|++++++++||++||.+. ...++++++||+.+++|+.++++|.+|..|+++.++++||++||..........
T Consensus 95 ~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 173 (302)
T 2xn4_A 95 MRDRRSTLGAAVLNGLLYAVGGFDG-STGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLS 173 (302)
T ss_dssp CSSCCBSCEEEEETTEEEEEEEECS-SCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECC
T ss_pred CCccccceEEEEECCEEEEEcCCCC-CccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcccc
Confidence 7899999999999999999999863 356789999999999999999999999999999999999999998654322357
Q ss_pred eEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC----CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEEC
Q 028925 81 FVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN----QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILD 154 (202)
Q Consensus 81 ~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 154 (202)
++++||+.+++|+.++ |.++..+++++++++||++||.. .+.+++||+++++|+.++.++ ..+..++++..+
T Consensus 174 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~--~~r~~~~~~~~~ 251 (302)
T 2xn4_A 174 TVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMN--MCRRNAGVCAVN 251 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCS--SCCBSCEEEEET
T ss_pred EEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCC--CccccCeEEEEC
Confidence 8999999999999998 45566677888999999999843 468999999999999997433 347788889999
Q ss_pred CeEEEEcccCCCC--ceeEEEeCCCCCCCcceeec-ccCCcee-eeEEEe
Q 028925 155 GKLLLFSLEEEPS--YSTLLYDPNAASGSEWQTSK-IKPSGLC-LCSVTI 200 (202)
Q Consensus 155 ~~i~v~gG~~~~~--~~~~~yd~~~~~~~~W~~~~-~~p~~~~-~~~~~~ 200 (202)
++||++||..... ..+++||++++ +|+.++ .+|.+|. ++++++
T Consensus 252 ~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~~~~~r~~~~~~~~ 298 (302)
T 2xn4_A 252 GLLYVVGGDDGSCNLASVEYYNPTTD---KWTVVSSCMSTGRSYAGVTVI 298 (302)
T ss_dssp TEEEEECCBCSSSBCCCEEEEETTTT---EEEECSSCCSSCCBSCEEEEE
T ss_pred CEEEEECCcCCCcccccEEEEcCCCC---eEEECCcccCcccccceEEEe
Confidence 9999999976432 47999999999 999996 8999988 444454
No 2
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=238.81 Aligned_cols=195 Identities=21% Similarity=0.337 Sum_probs=166.2
Q ss_pred CCccccceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCC--C
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIG--N 78 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~--~ 78 (202)
||.+|.+|++++++++|||+||.+.....++++++||+.+++|+.++++|.+|..|+++.++++||++||....... .
T Consensus 88 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 167 (306)
T 3ii7_A 88 PPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRV 167 (306)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEE
T ss_pred CCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccc
Confidence 78999999999999999999998755566789999999999999999999999999999999999999998654320 1
Q ss_pred cceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC----CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE
Q 028925 79 SKFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN----QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI 152 (202)
Q Consensus 79 ~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 152 (202)
..++++||+.+++|+.++ +.++..+++++++++||++||.. .+.+++||+++++|+.++.+ +..+..++++.
T Consensus 168 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~ 245 (306)
T 3ii7_A 168 LNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM--PWKGVTVKCAA 245 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC--SCCBSCCEEEE
T ss_pred cceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC--CCCccceeEEE
Confidence 678999999999999998 44566677888899999999843 46899999999999999633 33588888999
Q ss_pred ECCeEEEEcccCCCC--ceeEEEeCCCCCCCcceeecccCCcee-eeEEEe
Q 028925 153 LDGKLLLFSLEEEPS--YSTLLYDPNAASGSEWQTSKIKPSGLC-LCSVTI 200 (202)
Q Consensus 153 ~~~~i~v~gG~~~~~--~~~~~yd~~~~~~~~W~~~~~~p~~~~-~~~~~~ 200 (202)
++++||++||..... ..+++||++++ +|+.++.+|.++. ++++++
T Consensus 246 ~~~~i~v~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~~~~ 293 (306)
T 3ii7_A 246 VGSIVYVLAGFQGVGRLGHILEYNTETD---KWVANSKVRAFPVTSCLICV 293 (306)
T ss_dssp ETTEEEEEECBCSSSBCCEEEEEETTTT---EEEEEEEEECCSCTTCEEEE
T ss_pred ECCEEEEEeCcCCCeeeeeEEEEcCCCC---eEEeCCCcccccceeEEEEE
Confidence 999999999976432 48999999999 9999999988888 555444
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.5e-37 Score=237.15 Aligned_cols=191 Identities=23% Similarity=0.405 Sum_probs=165.0
Q ss_pred CCccccceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcc
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSK 80 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~ 80 (202)
||.+|..|++++++++||++||.+. ...++++++||+.+++|+.++++|.+|..|+++.++++||++||..... ...
T Consensus 108 ~p~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~ 184 (308)
T 1zgk_A 108 MSVPRNRIGVGVIDGHIYAVGGSHG-CIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTN--RLN 184 (308)
T ss_dssp CSSCCBTCEEEEETTEEEEECCEET-TEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSC--BCC
T ss_pred CCcCccccEEEEECCEEEEEcCCCC-CcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCC--cCc
Confidence 6889999999999999999999863 3457889999999999999999999999999999999999999987543 367
Q ss_pred eEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC----CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEEC
Q 028925 81 FVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN----QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILD 154 (202)
Q Consensus 81 ~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 154 (202)
++++||+.+++|+.++ |.++..+++++++++||++||.. ...+++||+++++|+.++.+ +..+..++++..+
T Consensus 185 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~--p~~r~~~~~~~~~ 262 (308)
T 1zgk_A 185 SAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM--KHRRSALGITVHQ 262 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC--SSCCBSCEEEEET
T ss_pred eEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC--CCCccceEEEEEC
Confidence 8999999999999998 45566677788899999999843 57899999999999999743 3357888899999
Q ss_pred CeEEEEcccCCCC--ceeEEEeCCCCCCCcceeecccCCceeeeEEE
Q 028925 155 GKLLLFSLEEEPS--YSTLLYDPNAASGSEWQTSKIKPSGLCLCSVT 199 (202)
Q Consensus 155 ~~i~v~gG~~~~~--~~~~~yd~~~~~~~~W~~~~~~p~~~~~~~~~ 199 (202)
++||++||..... ..+++||++++ +|+.++.+|.+|..++++
T Consensus 263 ~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~~ 306 (308)
T 1zgk_A 263 GRIYVLGGYDGHTFLDSVECYDPDTD---TWSEVTRMTSGRSGVGVA 306 (308)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTT---EEEEEEECSSCCBSCEEE
T ss_pred CEEEEEcCcCCCcccceEEEEcCCCC---EEeecCCCCCCcccceeE
Confidence 9999999976433 48999999999 999999999999954443
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.4e-37 Score=236.21 Aligned_cols=194 Identities=20% Similarity=0.368 Sum_probs=167.3
Q ss_pred CCccccceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcc
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSK 80 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~ 80 (202)
||.+|..|++++++++||++||.+. ...++++++||+.+++|+.++++|.+|..|+++.++++||++||..... ...
T Consensus 99 ~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~ 175 (301)
T 2vpj_A 99 MNVRRGLAGATTLGDMIYVSGGFDG-SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLN--ILN 175 (301)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBCS-SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSC--BCC
T ss_pred CCCCccceeEEEECCEEEEEcccCC-CcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCc--ccc
Confidence 6889999999999999999999863 3457899999999999999999999999999999999999999986543 467
Q ss_pred eEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC----CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEEC
Q 028925 81 FVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN----QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILD 154 (202)
Q Consensus 81 ~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 154 (202)
++++||+.+++|+.++ |.++..++++.++++||++||.. .+.+++||+++++|+.++.++ ..+..++++..+
T Consensus 176 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p--~~r~~~~~~~~~ 253 (301)
T 2vpj_A 176 SVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMT--TPRCYVGATVLR 253 (301)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCS--SCCBSCEEEEET
T ss_pred eEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCC--CcccceeEEEEC
Confidence 8999999999999998 44556677888899999999843 578999999999999997433 347888889999
Q ss_pred CeEEEEcccCCCC--ceeEEEeCCCCCCCcceeecccCCcee-eeEEEeeC
Q 028925 155 GKLLLFSLEEEPS--YSTLLYDPNAASGSEWQTSKIKPSGLC-LCSVTIKA 202 (202)
Q Consensus 155 ~~i~v~gG~~~~~--~~~~~yd~~~~~~~~W~~~~~~p~~~~-~~~~~~~~ 202 (202)
++||++||..... ..+++||++++ +|+.++.+|.+++ ++++++.+
T Consensus 254 ~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~~~~r~~~~~~~~~~ 301 (301)
T 2vpj_A 254 GRLYAIAGYDGNSLLSSIECYDPIID---SWEVVTSMGTQRCDAGVCVLRE 301 (301)
T ss_dssp TEEEEECCBCSSSBEEEEEEEETTTT---EEEEEEEEEEEEESCEEEEEEC
T ss_pred CEEEEEcCcCCCcccccEEEEcCCCC---eEEEcCCCCcccccceEEEeCC
Confidence 9999999976544 48999999999 9999999999999 66666653
No 5
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=4.2e-37 Score=236.29 Aligned_cols=190 Identities=16% Similarity=0.231 Sum_probs=164.3
Q ss_pred CCccccceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcc
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSK 80 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~ 80 (202)
||.+|.+|++++++++||++||.+ ...++++++||+.+++|+.++++|.+|..|+++.++++||++||..... ....
T Consensus 42 ~p~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~~ 118 (306)
T 3ii7_A 42 PFEKRRDAACVFWDNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGN-SALY 118 (306)
T ss_dssp CSCCCBSCEEEEETTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTB-SCCC
T ss_pred CCcccceeEEEEECCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCC-cEee
Confidence 689999999999999999999986 5567899999999999999999999999999999999999999986322 2467
Q ss_pred eEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCC----C----CCeEEEEeCCCCcEEEeccCCCCCCCCCeeE
Q 028925 81 FVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWK----N----QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRF 150 (202)
Q Consensus 81 ~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~----~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 150 (202)
++++||+.+++|+.++ |.++..++++.++++||++||. . .+.+++||+++++|+.++.+ +..+..+++
T Consensus 119 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~ 196 (306)
T 3ii7_A 119 LFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM--IEARKNHGL 196 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCC--SSCCBSCEE
T ss_pred eEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCc--cchhhcceE
Confidence 8999999999999998 4556667788899999999982 1 67899999999999999733 335888999
Q ss_pred EEECCeEEEEcccCCC--CceeEEEeCCCCCCCcceeecccCCceeeeEE
Q 028925 151 GILDGKLLLFSLEEEP--SYSTLLYDPNAASGSEWQTSKIKPSGLCLCSV 198 (202)
Q Consensus 151 ~~~~~~i~v~gG~~~~--~~~~~~yd~~~~~~~~W~~~~~~p~~~~~~~~ 198 (202)
+..+++||++||.... ...+++||++++ +|+.++.+|.++..+++
T Consensus 197 ~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~ 243 (306)
T 3ii7_A 197 VFVKDKIFAVGGQNGLGGLDNVEYYDIKLN---EWKMVSPMPWKGVTVKC 243 (306)
T ss_dssp EEETTEEEEECCEETTEEBCCEEEEETTTT---EEEECCCCSCCBSCCEE
T ss_pred EEECCEEEEEeCCCCCCCCceEEEeeCCCC---cEEECCCCCCCccceeE
Confidence 9999999999997654 247999999999 99999999998884443
No 6
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-36 Score=233.61 Aligned_cols=190 Identities=22% Similarity=0.384 Sum_probs=163.6
Q ss_pred CCccccceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcc
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSK 80 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~ 80 (202)
||.+|.+|++++++++||++||.+. ...++++++||+.+++|+.++++|.+|..|+++.++++||++||..... ...
T Consensus 48 ~p~~r~~~~~~~~~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~--~~~ 124 (302)
T 2xn4_A 48 LPSRRCRAGMVYMAGLVFAVGGFNG-SLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGST--GLS 124 (302)
T ss_dssp CSSCCBSCEEEEETTEEEEESCBCS-SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSC--EEE
T ss_pred CCcccccceEEEECCEEEEEeCcCC-CccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCc--cCc
Confidence 6899999999999999999999863 3457889999999999999999999999999999999999999986432 467
Q ss_pred eEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC------CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE
Q 028925 81 FVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN------QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI 152 (202)
Q Consensus 81 ~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~------~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 152 (202)
++++||+.+++|+.++ |.++..+++++++++||++||.. ...+++||+.+++|+.++.++ ..+..++++.
T Consensus 125 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p--~~r~~~~~~~ 202 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMS--TRRSGAGVGV 202 (302)
T ss_dssp EEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCS--SCCBSCEEEE
T ss_pred eEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCc--cccccccEEE
Confidence 8999999999999998 44556677788999999999832 568999999999999997433 3588889999
Q ss_pred ECCeEEEEcccCCCC--ceeEEEeCCCCCCCcceeecccCCceeeeEE
Q 028925 153 LDGKLLLFSLEEEPS--YSTLLYDPNAASGSEWQTSKIKPSGLCLCSV 198 (202)
Q Consensus 153 ~~~~i~v~gG~~~~~--~~~~~yd~~~~~~~~W~~~~~~p~~~~~~~~ 198 (202)
.+++||++||..... ..+++||++++ +|+.++.+|.++..+++
T Consensus 203 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 203 LNNLLYAVGGHDGPLVRKSVEVYDPTTN---AWRQVADMNMCRRNAGV 247 (302)
T ss_dssp ETTEEEEECCBSSSSBCCCEEEEETTTT---EEEEECCCSSCCBSCEE
T ss_pred ECCEEEEECCCCCCcccceEEEEeCCCC---CEeeCCCCCCccccCeE
Confidence 999999999976433 47999999999 99999999988884443
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=4e-37 Score=237.45 Aligned_cols=186 Identities=19% Similarity=0.271 Sum_probs=157.3
Q ss_pred CCccccceEEEEECCEEEEEcCcCC--CCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCC
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGM--DGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGN 78 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~ 78 (202)
||.+|.+|++++++++|||+||.+. ....++++++||+.+++|+.++++|.+|..|+++.++++||++||..... ..
T Consensus 85 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~ 163 (315)
T 4asc_A 85 LPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDR-KC 163 (315)
T ss_dssp BSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTS-CB
T ss_pred CCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCC-cc
Confidence 6889999999999999999999752 34567899999999999999999999999999999999999999984322 24
Q ss_pred cceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC----CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE
Q 028925 79 SKFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN----QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI 152 (202)
Q Consensus 79 ~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 152 (202)
..++++||+.+++|+.++ |.++..+++++++++||++||.. .+.+++||+++++|+.++.+ +..+..++++.
T Consensus 164 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~ 241 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAF--PQERSSLSLVS 241 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCC--SSCCBSCEEEE
T ss_pred cceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCC--CCcccceeEEE
Confidence 678999999999999998 45566677888999999999843 35799999999999999743 34588889999
Q ss_pred ECCeEEEEcccCC-----------CCceeEEEeCCCCCCCcceeecccCCcee
Q 028925 153 LDGKLLLFSLEEE-----------PSYSTLLYDPNAASGSEWQTSKIKPSGLC 194 (202)
Q Consensus 153 ~~~~i~v~gG~~~-----------~~~~~~~yd~~~~~~~~W~~~~~~p~~~~ 194 (202)
.+++||++||... ....+++||++++ +|+.+ +|.++.
T Consensus 242 ~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~--~~~~r~ 289 (315)
T 4asc_A 242 LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK---KWEGV--LREIAY 289 (315)
T ss_dssp ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT---EEEEE--ESCSSC
T ss_pred ECCEEEEECCccccCcCCccccccccCcEEEecCCCC---hhhhh--ccCCcC
Confidence 9999999999742 1247999999999 99999 444444
No 8
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=9e-37 Score=234.84 Aligned_cols=191 Identities=22% Similarity=0.359 Sum_probs=163.8
Q ss_pred CCccccceEEEEECCEEEEEcCcC---CCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCC
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYG---MDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIG 77 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~ 77 (202)
||.+|.+|++++++++||++||.. .....++++++||+.+++|+.++++|.+|..|+++.++++||++||.....
T Consensus 57 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-- 134 (308)
T 1zgk_A 57 LQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCI-- 134 (308)
T ss_dssp CSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTE--
T ss_pred CCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCc--
Confidence 688999999999999999999973 233456889999999999999999999999999999999999999986532
Q ss_pred CcceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC----CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE
Q 028925 78 NSKFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN----QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG 151 (202)
Q Consensus 78 ~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 151 (202)
...++++||+.+++|+.++ |.++..+++++++++||++||.. .+.+++||+.+++|+.++.+ +..+..++++
T Consensus 135 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~ 212 (308)
T 1zgk_A 135 HHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAM--NTIRSGAGVC 212 (308)
T ss_dssp ECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCC--SSCCBSCEEE
T ss_pred ccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC--CCccccceEE
Confidence 3568999999999999998 45566677788899999999843 57899999999999999743 3358888899
Q ss_pred EECCeEEEEcccCCC--CceeEEEeCCCCCCCcceeecccCCceeeeEE
Q 028925 152 ILDGKLLLFSLEEEP--SYSTLLYDPNAASGSEWQTSKIKPSGLCLCSV 198 (202)
Q Consensus 152 ~~~~~i~v~gG~~~~--~~~~~~yd~~~~~~~~W~~~~~~p~~~~~~~~ 198 (202)
.++++||++||.... ...+++||++++ +|+.++.+|.++..+++
T Consensus 213 ~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~ 258 (308)
T 1zgk_A 213 VLHNCIYAAGGYDGQDQLNSVERYDVETE---TWTFVAPMKHRRSALGI 258 (308)
T ss_dssp EETTEEEEECCBCSSSBCCCEEEEETTTT---EEEECCCCSSCCBSCEE
T ss_pred EECCEEEEEeCCCCCCccceEEEEeCCCC---cEEECCCCCCCccceEE
Confidence 999999999997644 358999999999 99999999999884443
No 9
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-36 Score=235.01 Aligned_cols=186 Identities=23% Similarity=0.343 Sum_probs=158.1
Q ss_pred CCccccceEEEEECCEEEEEcCcCC-CCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCc
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGM-DGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNS 79 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~ 79 (202)
||.+|..|++++++++|||+||.+. ....++++++||+.+++|+.++++|.+|..|++++++++||++||..... ...
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~ 174 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDK-KCT 174 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSS-CBC
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCC-Ccc
Confidence 6889999999999999999999863 34567899999999999999999999999999999999999999985432 246
Q ss_pred ceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC----CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE
Q 028925 80 KFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN----QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL 153 (202)
Q Consensus 80 ~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 153 (202)
.++++||+.+++|+.++ |.++..+++++++++||++||.. .+.+++||+++++|+.++.+ +..+..++++..
T Consensus 175 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~~~~~ 252 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF--PQERSSISLVSL 252 (318)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCC--SSCCBSCEEEEE
T ss_pred ceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCC--CCcccceEEEEE
Confidence 78999999999999998 45566677888999999999842 35789999999999999743 335888889999
Q ss_pred CCeEEEEcccCCC-----------CceeEEEeCCCCCCCcceeecccCCcee
Q 028925 154 DGKLLLFSLEEEP-----------SYSTLLYDPNAASGSEWQTSKIKPSGLC 194 (202)
Q Consensus 154 ~~~i~v~gG~~~~-----------~~~~~~yd~~~~~~~~W~~~~~~p~~~~ 194 (202)
+++||++||.... ...+++||++++ +|+++ +|.++.
T Consensus 253 ~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~--~~~~r~ 299 (318)
T 2woz_A 253 AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK---EWAGM--LKEIRY 299 (318)
T ss_dssp TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT---EEEEE--ESCCGG
T ss_pred CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC---Eehhh--cccccc
Confidence 9999999997531 348999999999 99998 565555
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=233.36 Aligned_cols=192 Identities=16% Similarity=0.219 Sum_probs=161.8
Q ss_pred CccccceEEEEECCEEEEEcCcC-----CCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccC-CC
Q 028925 2 NVARYDFACAEVNGKIYAVGGYG-----MDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSS-FT 75 (202)
Q Consensus 2 ~~~r~~~~~~~~~~~iyv~GG~~-----~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~-~~ 75 (202)
|.+|.+|++++++++||++||.. ......+++++||+.+++|+.++++|.+|..|+++.++++||++||... ..
T Consensus 33 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~ 112 (315)
T 4asc_A 33 QVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDG 112 (315)
T ss_dssp CSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTT
T ss_pred CCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCC
Confidence 45899999999999999999962 1222346699999999999999999999999999999999999999753 12
Q ss_pred CCCcceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC-----CCeEEEEeCCCCcEEEeccCCCCCCCCCe
Q 028925 76 IGNSKFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN-----QRKLTIFDPEDNSWKMVPVPLTGSSSIGF 148 (202)
Q Consensus 76 ~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~-----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~ 148 (202)
....+++++||+.+++|+.++ |.++..+++++++++||++||.. .+++++||+.+++|+.++.+ +..+..+
T Consensus 113 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~ 190 (315)
T 4asc_A 113 ERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM--QTARSLF 190 (315)
T ss_dssp CCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC--SSCCBSC
T ss_pred CcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC--CCchhce
Confidence 235678999999999999998 45566777888999999999842 46899999999999999743 3458889
Q ss_pred eEEEECCeEEEEcccCCCC--ceeEEEeCCCCCCCcceeecccCCceeeeEE
Q 028925 149 RFGILDGKLLLFSLEEEPS--YSTLLYDPNAASGSEWQTSKIKPSGLCLCSV 198 (202)
Q Consensus 149 ~~~~~~~~i~v~gG~~~~~--~~~~~yd~~~~~~~~W~~~~~~p~~~~~~~~ 198 (202)
+++.++++||++||..... ..+++||++++ +|+.++.+|.+|..+++
T Consensus 191 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 191 GATVHDGRIIVAAGVTDTGLTSSAEVYSITDN---KWAPFEAFPQERSSLSL 239 (315)
T ss_dssp EEEEETTEEEEEEEECSSSEEEEEEEEETTTT---EEEEECCCSSCCBSCEE
T ss_pred EEEEECCEEEEEeccCCCCccceEEEEECCCC---eEEECCCCCCcccceeE
Confidence 9999999999999986543 47999999999 99999999999984443
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=227.44 Aligned_cols=190 Identities=19% Similarity=0.362 Sum_probs=164.3
Q ss_pred CCccccceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCC---eEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCC
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK---WNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIG 77 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~ 77 (202)
||.+|.+|++++++++||++||.+ ....++++++||+.+++ |+.++++|.+|..|+++.++++||++||.....
T Consensus 49 ~p~~r~~~~~~~~~~~l~v~GG~~-~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~-- 125 (301)
T 2vpj_A 49 ITRKRRYVASVSLHDRIYVIGGYD-GRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSR-- 125 (301)
T ss_dssp CSSCCBSCEEEEETTEEEEECCBC-SSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSC--
T ss_pred CChhhccccEEEECCEEEEEcCCC-CCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCc--
Confidence 688999999999999999999986 34567899999999999 999999999999999999999999999987543
Q ss_pred CcceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCC----CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE
Q 028925 78 NSKFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKN----QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG 151 (202)
Q Consensus 78 ~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~----~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 151 (202)
...++++||+.+++|+.++ |.++..+++++++++||++||.. .+.+++||+++++|+.++.+ +..+..++++
T Consensus 126 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~--p~~r~~~~~~ 203 (301)
T 2vpj_A 126 RHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM--ATKRSGAGVA 203 (301)
T ss_dssp BCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC--SSCCBSCEEE
T ss_pred ccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC--CcccccceEE
Confidence 3678999999999999998 45566677888899999999843 57899999999999999633 3358888999
Q ss_pred EECCeEEEEcccCCCC--ceeEEEeCCCCCCCcceeecccCCceeeeEE
Q 028925 152 ILDGKLLLFSLEEEPS--YSTLLYDPNAASGSEWQTSKIKPSGLCLCSV 198 (202)
Q Consensus 152 ~~~~~i~v~gG~~~~~--~~~~~yd~~~~~~~~W~~~~~~p~~~~~~~~ 198 (202)
..+++||++||..... ..+++||++++ +|+.++.+|.++..+++
T Consensus 204 ~~~~~i~v~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~p~~r~~~~~ 249 (301)
T 2vpj_A 204 LLNDHIYVVGGFDGTAHLSSVEAYNIRTD---SWTTVTSMTTPRCYVGA 249 (301)
T ss_dssp EETTEEEEECCBCSSSBCCCEEEEETTTT---EEEEECCCSSCCBSCEE
T ss_pred EECCEEEEEeCCCCCcccceEEEEeCCCC---cEEECCCCCCcccceeE
Confidence 9999999999976543 58999999999 99999999998884433
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=8.4e-36 Score=230.32 Aligned_cols=192 Identities=20% Similarity=0.292 Sum_probs=160.3
Q ss_pred CccccceEEEEECCEEEEEcCcCCCC-----CceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCC
Q 028925 2 NVARYDFACAEVNGKIYAVGGYGMDG-----ESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTI 76 (202)
Q Consensus 2 ~~~r~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~ 76 (202)
|.+|.+|++++.+++||++||..... .....+++||+.+++|+.++++|.+|..|+++.++++||++||......
T Consensus 44 ~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 123 (318)
T 2woz_A 44 QIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTE 123 (318)
T ss_dssp TSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTC
T ss_pred cCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCC
Confidence 46899999999999999999963211 1234599999999999999999999999999999999999999864333
Q ss_pred CCcceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCC-----CCCeEEEEeCCCCcEEEeccCCCCCCCCCee
Q 028925 77 GNSKFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWK-----NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFR 149 (202)
Q Consensus 77 ~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~-----~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~ 149 (202)
....++++||+.+++|+.++ |.++..+++++.+++||++||. ..+++++||+.+++|+.++.+ +..+..++
T Consensus 124 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~--p~~r~~~~ 201 (318)
T 2woz_A 124 ASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM--KTPRSMFG 201 (318)
T ss_dssp CEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC--SSCCBSCE
T ss_pred cccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC--CCCcccce
Confidence 35678999999999999998 4556667778899999999983 256899999999999999743 34588888
Q ss_pred EEEECCeEEEEcccCCCC--ceeEEEeCCCCCCCcceeecccCCceeeeEE
Q 028925 150 FGILDGKLLLFSLEEEPS--YSTLLYDPNAASGSEWQTSKIKPSGLCLCSV 198 (202)
Q Consensus 150 ~~~~~~~i~v~gG~~~~~--~~~~~yd~~~~~~~~W~~~~~~p~~~~~~~~ 198 (202)
++..+++|||+||..... ..+++||++++ +|+.++.+|.++..+++
T Consensus 202 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~ 249 (318)
T 2woz_A 202 VAIHKGKIVIAGGVTEDGLSASVEAFDLKTN---KWEVMTEFPQERSSISL 249 (318)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEEEETTTC---CEEECCCCSSCCBSCEE
T ss_pred EEEECCEEEEEcCcCCCCccceEEEEECCCC---eEEECCCCCCcccceEE
Confidence 899999999999976543 47999999999 99999999999884443
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=4.6e-35 Score=229.39 Aligned_cols=197 Identities=19% Similarity=0.241 Sum_probs=155.5
Q ss_pred CC-ccccceEEEEECCEEEEEcCc-C---CCCCceeeeEEEeCCCCCeEEcCCCC-CCceeeeeEEECCEEEEEcCccCC
Q 028925 1 MN-VARYDFACAEVNGKIYAVGGY-G---MDGESLSSAEVYDPDTDKWNLIESLR-RPRWGCFACSFDGKLYVMGGRSSF 74 (202)
Q Consensus 1 m~-~~r~~~~~~~~~~~iyv~GG~-~---~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~iy~~gG~~~~ 74 (202)
|| .+|.+|++++++++|||+||. + .....++++++||+.+++|+.+++++ .+|..|++++++++||++||....
T Consensus 51 ~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 130 (357)
T 2uvk_A 51 FPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQN 130 (357)
T ss_dssp CTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHH
T ss_pred CCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCC
Confidence 67 799999999999999999998 2 12245789999999999999999987 999999999999999999997532
Q ss_pred C--------------------------------CCCcceEEEEeCCCCeEEeccCcc--c-eeeeeEEECCEEEEEeCC-
Q 028925 75 T--------------------------------IGNSKFVDVYNPERHTWCQMKNGC--V-MVTAHAVVGKKLFCMEWK- 118 (202)
Q Consensus 75 ~--------------------------------~~~~~~~~~yd~~~~~W~~~~~~~--~-~~~~~~~~~~~iyv~Gg~- 118 (202)
. ....+++++||+.+++|+.+++++ + ..+++++.+++||++||.
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~ 210 (357)
T 2uvk_A 131 IFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEA 210 (357)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEE
T ss_pred cCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeec
Confidence 1 012468999999999999998433 3 337778889999999983
Q ss_pred ----CCCeEEEEeC--CCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCC-------------------ceeEEE
Q 028925 119 ----NQRKLTIFDP--EDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPS-------------------YSTLLY 173 (202)
Q Consensus 119 ----~~~~~~~yd~--~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~-------------------~~~~~y 173 (202)
....++.||+ ++++|+.++.+..+..+.+++++..+++|||+||..... ..+++|
T Consensus 211 ~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~y 290 (357)
T 2uvk_A 211 KPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIH 290 (357)
T ss_dssp ETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEE
T ss_pred CCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEE
Confidence 2567888976 999999998554555567778899999999999964321 368999
Q ss_pred eCCCCCCCcceeecccCCcee-eeEEEe
Q 028925 174 DPNAASGSEWQTSKIKPSGLC-LCSVTI 200 (202)
Q Consensus 174 d~~~~~~~~W~~~~~~p~~~~-~~~~~~ 200 (202)
|++++ +|++++.+|.+|. ++++.+
T Consensus 291 d~~~~---~W~~~~~~p~~r~~~~~~~~ 315 (357)
T 2uvk_A 291 LWHNG---KWDKSGELSQGRAYGVSLPW 315 (357)
T ss_dssp ECC------CEEEEECSSCCBSSEEEEE
T ss_pred ecCCC---ceeeCCCCCCCcccceeEEe
Confidence 99999 9999999999998 444433
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=9.1e-34 Score=222.03 Aligned_cols=185 Identities=21% Similarity=0.226 Sum_probs=150.9
Q ss_pred CCccccceEEEEECCEEEEEcCcCCCCCceeeeEEEeCC--CCCeEEcCCCC-CCceeeeeEEECCEEEEEcCccC---C
Q 028925 1 MNVARYDFACAEVNGKIYAVGGYGMDGESLSSAEVYDPD--TDKWNLIESLR-RPRWGCFACSFDGKLYVMGGRSS---F 74 (202)
Q Consensus 1 m~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~--t~~W~~~~~~~-~~r~~~~~~~~~~~iy~~gG~~~---~ 74 (202)
||.+|.+|++++++++|||+||.+. +++++||+. +++|+.++++| .+|..|++++++++||++||... .
T Consensus 6 lP~~r~~~~~~~~~~~iyv~GG~~~-----~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~ 80 (357)
T 2uvk_A 6 TPVPFKSGTGAIDNDTVYIGLGSAG-----TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEG 80 (357)
T ss_dssp CSSCCCSCEEEEETTEEEEECGGGT-----TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTS
T ss_pred CCccccceEEEEECCEEEEEeCcCC-----CeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCc
Confidence 7999999999999999999999753 369999998 49999999999 89999999999999999999822 1
Q ss_pred CCCCcceEEEEeCCCCeEEeccC---ccceeeeeEEECCEEEEEeCCC--------------------------------
Q 028925 75 TIGNSKFVDVYNPERHTWCQMKN---GCVMVTAHAVVGKKLFCMEWKN-------------------------------- 119 (202)
Q Consensus 75 ~~~~~~~~~~yd~~~~~W~~~~~---~~~~~~~~~~~~~~iyv~Gg~~-------------------------------- 119 (202)
.....+++++||+.+++|+.+++ .++..+++++.+++||++||..
T Consensus 81 ~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (357)
T 2uvk_A 81 LTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKK 160 (357)
T ss_dssp CEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSC
T ss_pred cceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcccc
Confidence 12245789999999999999984 4455677777999999999843
Q ss_pred ------CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCC---CceeEEEeC--CCCCCCcceeecc
Q 028925 120 ------QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEP---SYSTLLYDP--NAASGSEWQTSKI 188 (202)
Q Consensus 120 ------~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~---~~~~~~yd~--~~~~~~~W~~~~~ 188 (202)
.+.+++||+.+++|+.++. .+...+.+++++..+++|||+||.... ...++.||+ +++ +|+.++.
T Consensus 161 ~~~~~~~~~v~~yd~~~~~W~~~~~-~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~---~W~~~~~ 236 (357)
T 2uvk_A 161 AEDYFFNKFLLSFDPSTQQWSYAGE-SPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL---KWNKLAP 236 (357)
T ss_dssp GGGGCCCCEEEEEETTTTEEEEEEE-CSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C---EEEECCC
T ss_pred ccccCCcccEEEEeCCCCcEEECCC-CCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC---cEEecCC
Confidence 3789999999999999973 333346668888999999999997543 347888876 888 9999988
Q ss_pred cCCcee
Q 028925 189 KPSGLC 194 (202)
Q Consensus 189 ~p~~~~ 194 (202)
+|.++.
T Consensus 237 ~~~~~~ 242 (357)
T 2uvk_A 237 VSSPDG 242 (357)
T ss_dssp SSTTTC
T ss_pred CCCCcc
Confidence 866643
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.2e-31 Score=226.23 Aligned_cols=177 Identities=21% Similarity=0.290 Sum_probs=150.2
Q ss_pred CCccccceEEEEE--CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE-CCEEEEEcCccCCCCC
Q 028925 1 MNVARYDFACAEV--NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF-DGKLYVMGGRSSFTIG 77 (202)
Q Consensus 1 m~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iy~~gG~~~~~~~ 77 (202)
||.+|.+|+++++ +++|||+||.+.....++++|+||+.+++|+.++++|.+|..|+++++ +++||++||.....
T Consensus 436 ~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-- 513 (695)
T 2zwa_A 436 VPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-- 513 (695)
T ss_dssp CCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC--
T ss_pred CCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC--
Confidence 6889999999999 999999999975555788999999999999999999999999999996 99999999986532
Q ss_pred CcceEEEEeCCCCeEEeccC-----ccceeeeeEEEC---CEEEEEeCCC------CCeEEEEeCCCCc------EEEec
Q 028925 78 NSKFVDVYNPERHTWCQMKN-----GCVMVTAHAVVG---KKLFCMEWKN------QRKLTIFDPEDNS------WKMVP 137 (202)
Q Consensus 78 ~~~~~~~yd~~~~~W~~~~~-----~~~~~~~~~~~~---~~iyv~Gg~~------~~~~~~yd~~~~~------W~~~~ 137 (202)
++++||+.+++|+.+++ .++..+++++++ ++||++||.. .+.+++||+.+++ |+.+.
T Consensus 514 ---~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~ 590 (695)
T 2zwa_A 514 ---AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKL 590 (695)
T ss_dssp ---SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEE
T ss_pred ---CEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcC
Confidence 89999999999999973 345555656666 8999999842 4689999999999 88887
Q ss_pred cCCCCCCCCCeeEEEEC-CeEEEEcccCCC-----CceeEEEeCCCCCCCcceee
Q 028925 138 VPLTGSSSIGFRFGILD-GKLLLFSLEEEP-----SYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 138 ~~~~~~~~~~~~~~~~~-~~i~v~gG~~~~-----~~~~~~yd~~~~~~~~W~~~ 186 (202)
.. ++..|.++++++++ ++|||+||.... ...+++||++++ +|+.+
T Consensus 591 ~~-p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~---~W~~~ 641 (695)
T 2zwa_A 591 QH-PLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSE---TLTSI 641 (695)
T ss_dssp EC-GGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTT---EEEEC
T ss_pred CC-CCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCC---eEEEe
Confidence 42 23458888888888 999999997532 358999999999 99976
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=8.6e-31 Score=221.01 Aligned_cols=192 Identities=9% Similarity=0.061 Sum_probs=152.1
Q ss_pred CccccceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcC-C-----CCCCceeeeeEEE--CCEEEEEcCccC
Q 028925 2 NVARYDFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIE-S-----LRRPRWGCFACSF--DGKLYVMGGRSS 73 (202)
Q Consensus 2 ~~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~-~-----~~~~r~~~~~~~~--~~~iy~~gG~~~ 73 (202)
|.+|.++ +++++++|||+||.+. ..++++++||+.+++|+.++ + +|.+|.+|+++++ +++||++||...
T Consensus 386 p~rr~g~-~~~~~~~iyv~GG~~~--~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~ 462 (695)
T 2zwa_A 386 INRKFGD-VDVAGNDVFYMGGSNP--YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA 462 (695)
T ss_dssp TCCBSCE-EEECSSCEEEECCBSS--SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS
T ss_pred CCCceeE-EEEECCEEEEECCCCC--CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC
Confidence 4455554 4458999999999864 66789999999999999987 5 7899999999999 999999999875
Q ss_pred CCCCCcceEEEEeCCCCeEEecc--CccceeeeeEEE-CCEEEEEeCCCCC-eEEEEeCCCCcEEEeccC-CCCCCCCCe
Q 028925 74 FTIGNSKFVDVYNPERHTWCQMK--NGCVMVTAHAVV-GKKLFCMEWKNQR-KLTIFDPEDNSWKMVPVP-LTGSSSIGF 148 (202)
Q Consensus 74 ~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~-~~~iyv~Gg~~~~-~~~~yd~~~~~W~~~~~~-~~~~~~~~~ 148 (202)
... ..+++++||+.+++|+.++ |.++..++++++ +++||++||.... .+++||+.+++|+.++.. ..+..+.++
T Consensus 463 ~~~-~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~ 541 (695)
T 2zwa_A 463 PHQ-GLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVS 541 (695)
T ss_dssp TTC-BCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBS
T ss_pred CCC-ccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccce
Confidence 432 4678999999999999998 455666777775 9999999984332 799999999999999731 133357777
Q ss_pred eEEEEC---CeEEEEcccCCC----CceeEEEeCCCCCCCc------ceeeccc-CCcee-eeEEEe
Q 028925 149 RFGILD---GKLLLFSLEEEP----SYSTLLYDPNAASGSE------WQTSKIK-PSGLC-LCSVTI 200 (202)
Q Consensus 149 ~~~~~~---~~i~v~gG~~~~----~~~~~~yd~~~~~~~~------W~~~~~~-p~~~~-~~~~~~ 200 (202)
++++++ ++|||+||.... ...+++||++++ + |+.+..+ +.+|. |+++.+
T Consensus 542 ~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~---~w~~~~~W~~~~~~p~~~R~~~~~~~~ 605 (695)
T 2zwa_A 542 AGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE---NATEPITVIKKLQHPLFQRYGSQIKYI 605 (695)
T ss_dssp CEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT---CSSCCEEEEEEEECGGGCCBSCEEEEE
T ss_pred eEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC---ccccceEEEEcCCCCCCCcccceEEEe
Confidence 766666 899999998543 358999999999 7 8998664 56766 444444
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=5.9e-28 Score=202.89 Aligned_cols=189 Identities=17% Similarity=0.239 Sum_probs=143.8
Q ss_pred CCccccceE--EE-EECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE-CCEEEEEcCccCCCC
Q 028925 1 MNVARYDFA--CA-EVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF-DGKLYVMGGRSSFTI 76 (202)
Q Consensus 1 m~~~r~~~~--~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iy~~gG~~~~~~ 76 (202)
||.+|..++ ++ ..+++||++||.+.. ++++||+.+++|+++++|+.+|.+|+++.+ +++||++||..+...
T Consensus 237 ~~~~~~~~~~~~~~~~~g~lyv~GG~~~~-----~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~ 311 (656)
T 1k3i_A 237 TVTKHDMFCPGISMDGNGQIVVTGGNDAK-----KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGV 311 (656)
T ss_dssp EECSCCCSSCEEEECTTSCEEEECSSSTT-----CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSS
T ss_pred cCCCCCCccccccCCCCCCEEEeCCCCCC-----ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCc
Confidence 455666554 33 358999999997532 699999999999999999999999999998 999999999533222
Q ss_pred CCcceEEEEeCCCCeEEecc-----Cccce--------------------------------------------------
Q 028925 77 GNSKFVDVYNPERHTWCQMK-----NGCVM-------------------------------------------------- 101 (202)
Q Consensus 77 ~~~~~~~~yd~~~~~W~~~~-----~~~~~-------------------------------------------------- 101 (202)
..+++++||+.+++|+.++ |++..
T Consensus 312 -~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~ 390 (656)
T 1k3i_A 312 -FEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 390 (656)
T ss_dssp -CCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE
T ss_pred -ccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccc
Confidence 4678999999999999962 11100
Q ss_pred ---------eeeeEE---ECCEEEEEeCCC-------CC---eEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEE
Q 028925 102 ---------VTAHAV---VGKKLFCMEWKN-------QR---KLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLL 158 (202)
Q Consensus 102 ---------~~~~~~---~~~~iyv~Gg~~-------~~---~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~ 158 (202)
.+.+++ .+++||++||.. .+ .+++||+++++|..+..+..+..|..++++.+ +++||
T Consensus 391 ~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~ 470 (656)
T 1k3i_A 391 NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTF 470 (656)
T ss_dssp TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEE
T ss_pred ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEE
Confidence 112222 389999999842 23 78899999999999862233445777777777 99999
Q ss_pred EEcccCC--------CCceeEEEeCCCCCCCcceeecccCCcee-eeEE
Q 028925 159 LFSLEEE--------PSYSTLLYDPNAASGSEWQTSKIKPSGLC-LCSV 198 (202)
Q Consensus 159 v~gG~~~--------~~~~~~~yd~~~~~~~~W~~~~~~p~~~~-~~~~ 198 (202)
|+||... ....+++||++++ +|+.++.+|.+|. |+++
T Consensus 471 v~GG~~~~~~~~~~~~~~~v~~ydp~t~---~W~~~~~~~~~R~~hs~a 516 (656)
T 1k3i_A 471 ITGGQRRGIPFEDSTPVFTPEIYVPEQD---TFYKQNPNSIVRVYHSIS 516 (656)
T ss_dssp EECCBSBCCTTCCCSBCCCCEEEEGGGT---EEEECCCCSSCCCTTEEE
T ss_pred EECCcccCcCcCCCCcccceEEEcCCCC---ceeecCCCCCccccccHh
Confidence 9999652 1247999999999 9999999999988 4333
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.94 E-value=1.6e-25 Score=188.06 Aligned_cols=190 Identities=15% Similarity=0.214 Sum_probs=139.7
Q ss_pred CccccceEEEEE--CCEEEEEcCcCCCC-----CceeeeEEEeCCCCCeEEcCCCCCCceeee--eE-EECCEEEEEcCc
Q 028925 2 NVARYDFACAEV--NGKIYAVGGYGMDG-----ESLSSAEVYDPDTDKWNLIESLRRPRWGCF--AC-SFDGKLYVMGGR 71 (202)
Q Consensus 2 ~~~r~~~~~~~~--~~~iyv~GG~~~~~-----~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~--~~-~~~~~iy~~gG~ 71 (202)
|.||..+.++++ +++||++||.+... .....+++||+.+++|+.+++++.+|..+. ++ ..+++||++||.
T Consensus 183 ~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~ 262 (656)
T 1k3i_A 183 DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN 262 (656)
T ss_dssp ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSS
T ss_pred cCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCC
Confidence 346667777777 99999999975321 234679999999999999988877775543 33 358999999997
Q ss_pred cCCCCCCcceEEEEeCCCCeEEeccC--ccceeeeeEEE-CCEEEEEeCC-----CCCeEEEEeCCCCcEEEec----cC
Q 028925 72 SSFTIGNSKFVDVYNPERHTWCQMKN--GCVMVTAHAVV-GKKLFCMEWK-----NQRKLTIFDPEDNSWKMVP----VP 139 (202)
Q Consensus 72 ~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~~~~~~-~~~iyv~Gg~-----~~~~~~~yd~~~~~W~~~~----~~ 139 (202)
.. .++++||+.+++|+++++ .+|..++++++ +++||++||. ..+.+++||+++++|+.++ .|
T Consensus 263 ~~------~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p 336 (656)
T 1k3i_A 263 DA------KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNP 336 (656)
T ss_dssp ST------TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGG
T ss_pred CC------CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccc
Confidence 53 269999999999999984 44555677777 9999999983 2478999999999999973 11
Q ss_pred CCCC--------------------------------------------------------CCCCeeEEE---ECCeEEEE
Q 028925 140 LTGS--------------------------------------------------------SSIGFRFGI---LDGKLLLF 160 (202)
Q Consensus 140 ~~~~--------------------------------------------------------~~~~~~~~~---~~~~i~v~ 160 (202)
.+.. .+...+.++ .+++||++
T Consensus 337 ~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~ 416 (656)
T 1k3i_A 337 MLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTF 416 (656)
T ss_dssp GCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEE
T ss_pred cccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEE
Confidence 1110 001122222 48999999
Q ss_pred cccCCC-----Cc---eeEEEeCCCCCCCcceeec--ccCCcee-eeEEEe
Q 028925 161 SLEEEP-----SY---STLLYDPNAASGSEWQTSK--IKPSGLC-LCSVTI 200 (202)
Q Consensus 161 gG~~~~-----~~---~~~~yd~~~~~~~~W~~~~--~~p~~~~-~~~~~~ 200 (202)
||.... .. .+++||++++ +|+.+. .||.+|. ++++++
T Consensus 417 GG~~~~~~~~~~~~~~~v~~yd~~~~---~W~~~~~~~mp~~R~~~~~~~l 464 (656)
T 1k3i_A 417 GGSPDYQDSDATTNAHIITLGEPGTS---PNTVFASNGLYFARTFHTSVVL 464 (656)
T ss_dssp CCBSSSSSSBCCCCEEEEECCSTTSC---CEEEECTTCCSSCCBSCEEEEC
T ss_pred eCCCCCCCCCcCCcceEEEcCCCCCC---CeeEEccCCCCCCcccCCeEEC
Confidence 996421 12 6889999999 999986 8999987 444443
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.66 E-value=1.8e-05 Score=58.08 Aligned_cols=155 Identities=16% Similarity=0.065 Sum_probs=103.8
Q ss_pred eEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeC
Q 028925 8 FACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 8 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
+.+...++.||+..|... .+++.++|+++++-...-+++...+...++..+++||+.... ...+.+||+
T Consensus 24 qGL~~~~~~LyestG~~g----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-------~~~v~v~D~ 92 (243)
T 3mbr_X 24 EGLFYLRGHLYESTGETG----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-------NHEGFVYDL 92 (243)
T ss_dssp EEEEEETTEEEEEECCTT----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-------SSEEEEEET
T ss_pred ccEEEECCEEEEECCCCC----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-------CCEEEEEEC
Confidence 366677899999988642 246899999999987666666666777778889999998653 357999999
Q ss_pred CCCeEEeccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEE-eccCCCCCC-CCCeeEEEECCeEEEEcccCC
Q 028925 88 ERHTWCQMKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKM-VPVPLTGSS-SIGFRFGILDGKLLLFSLEEE 165 (202)
Q Consensus 88 ~~~~W~~~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-~~~~~~~~~-~~~~~~~~~~~~i~v~gG~~~ 165 (202)
.+.+-..--+.+....+.+.-++++|+..| ...++.+|+++.+-.. +.....+.. ..--.+...+++||+--.
T Consensus 93 ~tl~~~~ti~~~~~Gwglt~dg~~L~vSdg--s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw--- 167 (243)
T 3mbr_X 93 ATLTPRARFRYPGEGWALTSDDSHLYMSDG--TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVW--- 167 (243)
T ss_dssp TTTEEEEEEECSSCCCEEEECSSCEEEECS--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET---
T ss_pred CcCcEEEEEeCCCCceEEeeCCCEEEEECC--CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEEC---
Confidence 887643322222233444555678898865 6789999999876443 321111101 111124456999996432
Q ss_pred CCceeEEEeCCCC
Q 028925 166 PSYSTLLYDPNAA 178 (202)
Q Consensus 166 ~~~~~~~yd~~~~ 178 (202)
..+.+.+.|++++
T Consensus 168 ~s~~I~vIDp~tG 180 (243)
T 3mbr_X 168 LTSRIARIDPASG 180 (243)
T ss_dssp TTTEEEEECTTTC
T ss_pred CCCeEEEEECCCC
Confidence 2347999999987
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.61 E-value=4.1e-05 Score=58.68 Aligned_cols=156 Identities=15% Similarity=0.007 Sum_probs=96.3
Q ss_pred eEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCe-EEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEe
Q 028925 8 FACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKW-NLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYN 86 (202)
Q Consensus 8 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd 86 (202)
+.++..++++|+.... ...+.++|+.+.+- ..++....++ ..+..-++++|+.... ...+.++|
T Consensus 47 ~~i~~~~~~lyv~~~~------~~~v~viD~~t~~~~~~i~~~~~p~--~i~~~~~g~lyv~~~~-------~~~v~~iD 111 (328)
T 3dsm_A 47 QSMVIRDGIGWIVVNN------SHVIFAIDINTFKEVGRITGFTSPR--YIHFLSDEKAYVTQIW-------DYRIFIIN 111 (328)
T ss_dssp EEEEEETTEEEEEEGG------GTEEEEEETTTCCEEEEEECCSSEE--EEEEEETTEEEEEEBS-------CSEEEEEE
T ss_pred eEEEEECCEEEEEEcC------CCEEEEEECcccEEEEEcCCCCCCc--EEEEeCCCeEEEEECC-------CCeEEEEE
Confidence 4566679999999642 24689999998876 3343322222 2222368899998632 24699999
Q ss_pred CCCCeEEeccCccc------eeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE-EECCeEEE
Q 028925 87 PERHTWCQMKNGCV------MVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG-ILDGKLLL 159 (202)
Q Consensus 87 ~~~~~W~~~~~~~~------~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v 159 (202)
+.+.+-...-+... ....++..++++|+......+.+.++|+++++....-.. .. . ...++ ..++++|+
T Consensus 112 ~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~--~-p~~i~~~~dG~l~v 187 (328)
T 3dsm_A 112 PKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GI--Q-PTSLVMDKYNKMWT 187 (328)
T ss_dssp TTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SS--C-BCCCEECTTSEEEE
T ss_pred CCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CC--C-ccceEEcCCCCEEE
Confidence 99987543211111 223344578999998632367899999999876543211 11 1 11222 34689888
Q ss_pred EcccCC--C-----CceeEEEeCCCCCCCccee
Q 028925 160 FSLEEE--P-----SYSTLLYDPNAASGSEWQT 185 (202)
Q Consensus 160 ~gG~~~--~-----~~~~~~yd~~~~~~~~W~~ 185 (202)
...... . ...+.++|+++. +...
T Consensus 188 ~~~~~~~~~~~~~~~~~v~~id~~t~---~v~~ 217 (328)
T 3dsm_A 188 ITDGGYEGSPYGYEAPSLYRIDAETF---TVEK 217 (328)
T ss_dssp EBCCBCTTCSSCBCCCEEEEEETTTT---EEEE
T ss_pred EECCCccCCccccCCceEEEEECCCC---eEEE
Confidence 753221 1 247999999987 6554
No 21
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.50 E-value=2.5e-05 Score=57.86 Aligned_cols=155 Identities=16% Similarity=0.070 Sum_probs=100.1
Q ss_pred eEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeC
Q 028925 8 FACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 8 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
+.+...++.||+..|... .+++.++|++|.+-...-+++...+...++..+++||+.... ...+.+||+
T Consensus 46 qGL~~~~~~LyestG~~g----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-------~~~v~v~D~ 114 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNG----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-------NGLGFVWNI 114 (262)
T ss_dssp EEEEEETTEEEEEEEETT----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-------SSEEEEEET
T ss_pred ceEEEECCEEEEECCCCC----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-------CCEEEEEEC
Confidence 445556899999988642 257899999999876555566555666677789999998653 357999999
Q ss_pred CCCeEEeccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEE-eccCCCCCCCCCe-eEEEECCeEEEEcccCC
Q 028925 88 ERHTWCQMKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKM-VPVPLTGSSSIGF-RFGILDGKLLLFSLEEE 165 (202)
Q Consensus 88 ~~~~W~~~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~-~~~~~~~~i~v~gG~~~ 165 (202)
.+.+-..--+.+....+.+..++.+|+..| .+.++.+|+++.+-.. +.....+...... .+...+++||+-- -
T Consensus 115 ~t~~~~~ti~~~~eG~glt~dg~~L~~SdG--s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~---w 189 (262)
T 3nol_A 115 RNLRQVRSFNYDGEGWGLTHNDQYLIMSDG--TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANV---W 189 (262)
T ss_dssp TTCCEEEEEECSSCCCCEEECSSCEEECCS--SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEE---T
T ss_pred ccCcEEEEEECCCCceEEecCCCEEEEECC--CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEE---c
Confidence 887643321222233344445667888765 5789999999876443 3321111111111 2344589999643 2
Q ss_pred CCceeEEEeCCCC
Q 028925 166 PSYSTLLYDPNAA 178 (202)
Q Consensus 166 ~~~~~~~yd~~~~ 178 (202)
....+.+.|++++
T Consensus 190 ~~~~I~vIDp~tG 202 (262)
T 3nol_A 190 QTNKIVRIDPETG 202 (262)
T ss_dssp TSSEEEEECTTTC
T ss_pred cCCeEEEEECCCC
Confidence 2447999999987
No 22
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.43 E-value=6.3e-05 Score=55.85 Aligned_cols=152 Identities=13% Similarity=0.025 Sum_probs=98.6
Q ss_pred eEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeC
Q 028925 8 FACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 8 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
+.+...++.||+..|.. ..+.++|+++.+-...- ++...+...++..+++||+.... ...+.+||+
T Consensus 58 qGL~~~~~~Ly~stG~~------g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-------~~~v~V~D~ 123 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQ------GTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-------EGLLFTWSG 123 (268)
T ss_dssp EEEEEETTEEEEEETTT------TEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-------SCEEEEEET
T ss_pred ceEEEECCEEEEEcCCC------CEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-------CCEEEEEEC
Confidence 45666789999998864 22889999998864433 55544556677789999998653 357999999
Q ss_pred CCCeEEeccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEE-eccCCCCCCC-CCeeEEEECCeEEEEcccCC
Q 028925 88 ERHTWCQMKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKM-VPVPLTGSSS-IGFRFGILDGKLLLFSLEEE 165 (202)
Q Consensus 88 ~~~~W~~~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-~~~~~~~~~~-~~~~~~~~~~~i~v~gG~~~ 165 (202)
.+.+-..--+......+.+..++.+|+..| .+.++.+|+++.+-.. +.....+... .--.+...+|+||+-- -
T Consensus 124 ~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdG--s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv---w 198 (268)
T 3nok_A 124 MPPQRERTTRYSGEGWGLCYWNGKLVRSDG--GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI---W 198 (268)
T ss_dssp TTTEEEEEEECSSCCCCEEEETTEEEEECS--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE---T
T ss_pred CcCcEEEEEeCCCceeEEecCCCEEEEECC--CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE---C
Confidence 987644322222223445566788998864 7799999999876444 3211111011 1112344589999633 2
Q ss_pred CCceeEEEeCCCC
Q 028925 166 PSYSTLLYDPNAA 178 (202)
Q Consensus 166 ~~~~~~~yd~~~~ 178 (202)
....+.+.|++++
T Consensus 199 ~s~~I~vIDp~TG 211 (268)
T 3nok_A 199 HSSDVLEIDPATG 211 (268)
T ss_dssp TCSEEEEECTTTC
T ss_pred CCCeEEEEeCCCC
Confidence 2347999999987
No 23
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.31 E-value=0.00019 Score=54.87 Aligned_cols=150 Identities=10% Similarity=-0.084 Sum_probs=88.4
Q ss_pred EEEE-ECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCC----ceeeeeEEECCEEEEEcCccCCCCCCcceEE
Q 028925 9 ACAE-VNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRP----RWGCFACSFDGKLYVMGGRSSFTIGNSKFVD 83 (202)
Q Consensus 9 ~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~ 83 (202)
.++. .+++||+.... ...+.++|+.+++-...-+.... ..-..++..++++|+..-. ....+.
T Consensus 88 ~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~------~~~~v~ 155 (328)
T 3dsm_A 88 YIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS------YQNRIL 155 (328)
T ss_dssp EEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT------TCCEEE
T ss_pred EEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC------CCCEEE
Confidence 3344 57899998632 24689999998875422111110 0112333478899987420 134799
Q ss_pred EEeCCCCeEEeccCccceeeee-EEECCEEEEEeCCC---------CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE
Q 028925 84 VYNPERHTWCQMKNGCVMVTAH-AVVGKKLFCMEWKN---------QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL 153 (202)
Q Consensus 84 ~yd~~~~~W~~~~~~~~~~~~~-~~~~~~iyv~Gg~~---------~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 153 (202)
++|+.+++....-+........ ...++++|+..... ...++++|+++.+....-..... .....++..
T Consensus 156 viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g--~~p~~la~~ 233 (328)
T 3dsm_A 156 KIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG--DWPSEVQLN 233 (328)
T ss_dssp EEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT--CCCEEEEEC
T ss_pred EEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC--CCceeEEEe
Confidence 9999998765432211111222 23468898885322 36899999998886543211111 223344444
Q ss_pred --CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 154 --DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 154 --~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
++.+|+..+ .++++|++++
T Consensus 234 ~d~~~lyv~~~------~v~~~d~~t~ 254 (328)
T 3dsm_A 234 GTRDTLYWINN------DIWRMPVEAD 254 (328)
T ss_dssp TTSCEEEEESS------SEEEEETTCS
T ss_pred cCCCEEEEEcc------EEEEEECCCC
Confidence 677888753 6899999887
No 24
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.18 E-value=0.00091 Score=49.81 Aligned_cols=155 Identities=14% Similarity=0.016 Sum_probs=95.6
Q ss_pred eEEEEEC-CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEe
Q 028925 8 FACAEVN-GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYN 86 (202)
Q Consensus 8 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd 86 (202)
+.+...+ ++||+..|... .+.+.++|+.+++-...-+++...+....+..+++||+..-. ...+.+||
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~----~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-------~~~v~viD 92 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG----RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-------KNIGFIYD 92 (266)
T ss_dssp EEEEECSTTEEEEEECSTT----TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-------CSEEEEEE
T ss_pred ccEEEeCCCeEEEECCCCC----CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-------CCEEEEEE
Confidence 4555554 89999877421 256999999999875544444444555566678899998542 35799999
Q ss_pred CCCCeEEeccCcc-ceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEE-eccCCCCC-CCCCeeEEEECCeEEEEccc
Q 028925 87 PERHTWCQMKNGC-VMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKM-VPVPLTGS-SSIGFRFGILDGKLLLFSLE 163 (202)
Q Consensus 87 ~~~~~W~~~~~~~-~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-~~~~~~~~-~~~~~~~~~~~~~i~v~gG~ 163 (202)
+.+.+-..--+.. ....+.+.-++++|+..| .+.+..+|+++.+-.. +.....+. ...--.+...++++|+--.
T Consensus 93 ~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~g--s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~- 169 (266)
T 2iwa_A 93 RRTLSNIKNFTHQMKDGWGLATDGKILYGSDG--TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIW- 169 (266)
T ss_dssp TTTTEEEEEEECCSSSCCEEEECSSSEEEECS--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET-
T ss_pred CCCCcEEEEEECCCCCeEEEEECCCEEEEECC--CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecC-
Confidence 9887532211222 122333344667998764 6799999999876433 33111110 0111133344889997542
Q ss_pred CCCCceeEEEeCCCC
Q 028925 164 EEPSYSTLLYDPNAA 178 (202)
Q Consensus 164 ~~~~~~~~~yd~~~~ 178 (202)
....+.+.|++++
T Consensus 170 --~~~~V~vID~~tg 182 (266)
T 2iwa_A 170 --QTDCIARISAKDG 182 (266)
T ss_dssp --TSSEEEEEETTTC
T ss_pred --CCCeEEEEECCCC
Confidence 2447999999987
No 25
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.94 E-value=0.0038 Score=48.29 Aligned_cols=155 Identities=13% Similarity=0.100 Sum_probs=92.2
Q ss_pred EEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCC-------CCceeeeeEEECCEEEEEcCccCCCCCCc
Q 028925 9 ACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLR-------RPRWGCFACSFDGKLYVMGGRSSFTIGNS 79 (202)
Q Consensus 9 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~-------~~r~~~~~~~~~~~iy~~gG~~~~~~~~~ 79 (202)
+-++.+++||+.... ..++.||+++.+ |+.-.... ........+..++.||+... .
T Consensus 48 ~p~v~~~~v~~~~~~-------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------~ 112 (376)
T 3q7m_A 48 HPALADNVVYAADRA-------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE--------K 112 (376)
T ss_dssp CCEEETTEEEEECTT-------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET--------T
T ss_pred ccEEECCEEEEEcCC-------CeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC--------C
Confidence 556779999998532 268899998765 76443211 22233444567889998643 2
Q ss_pred ceEEEEeCCCC--eEEeccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc--EEEeccCCCCCCCCCeeEEEECC
Q 028925 80 KFVDVYNPERH--TWCQMKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNS--WKMVPVPLTGSSSIGFRFGILDG 155 (202)
Q Consensus 80 ~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
..+..+|+.+. .|+.-.+.. ......+.++.||+.. ....++.||+++.+ |+.-........+.....+..++
T Consensus 113 g~l~a~d~~tG~~~W~~~~~~~-~~~~p~~~~~~v~v~~--~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~ 189 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKVAGE-ALSRPVVSDGLVLIHT--SNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFG 189 (376)
T ss_dssp SEEEEEETTTCCEEEEEECSSC-CCSCCEEETTEEEEEC--TTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETT
T ss_pred CEEEEEECCCCCEEEEEeCCCc-eEcCCEEECCEEEEEc--CCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECC
Confidence 46899998766 476543221 1223356688888753 46789999997775 88754221111122233445678
Q ss_pred eEEEEcccCCCCceeEEEeCCCCCCCcceee
Q 028925 156 KLLLFSLEEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 156 ~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
.||+-. ....+..||++++. -.|+.-
T Consensus 190 ~v~~g~----~~g~l~~~d~~tG~-~~w~~~ 215 (376)
T 3q7m_A 190 AAVVGG----DNGRVSAVLMEQGQ-MIWQQR 215 (376)
T ss_dssp EEEECC----TTTEEEEEETTTCC-EEEEEE
T ss_pred EEEEEc----CCCEEEEEECCCCc-EEEEEe
Confidence 877732 12368889987651 157654
No 26
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.73 E-value=0.0048 Score=45.23 Aligned_cols=111 Identities=14% Similarity=0.096 Sum_probs=77.0
Q ss_pred eeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCC
Q 028925 54 WGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDN 131 (202)
Q Consensus 54 ~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~ 131 (202)
+-..+...++.||...|..+ .+.+.++|+++.+-...- +......+....+++||++.. ..+.+++||+++-
T Consensus 22 ftqGL~~~~~~LyestG~~g-----~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw-~~~~v~v~D~~tl 95 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETG-----RSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW-RNHEGFVYDLATL 95 (243)
T ss_dssp CEEEEEEETTEEEEEECCTT-----SCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES-SSSEEEEEETTTT
T ss_pred ccccEEEECCEEEEECCCCC-----CceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe-eCCEEEEEECCcC
Confidence 33455567899999888643 347999999998765533 223334556778999999975 6789999999876
Q ss_pred cEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 132 SWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 132 ~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+-..-- +. + ..+.+++..++++|+..| +..++.+|+++.
T Consensus 96 ~~~~ti-~~-~--~~Gwglt~dg~~L~vSdg----s~~l~~iDp~t~ 134 (243)
T 3mbr_X 96 TPRARF-RY-P--GEGWALTSDDSHLYMSDG----TAVIRKLDPDTL 134 (243)
T ss_dssp EEEEEE-EC-S--SCCCEEEECSSCEEEECS----SSEEEEECTTTC
T ss_pred cEEEEE-eC-C--CCceEEeeCCCEEEEECC----CCeEEEEeCCCC
Confidence 644422 11 1 245677777788888764 336899999885
No 27
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.52 E-value=0.0067 Score=46.82 Aligned_cols=142 Identities=15% Similarity=0.128 Sum_probs=77.7
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCE-EEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGK-LYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
+.+|+.++.+ ..+.+||+.+++-...-..... ....+..-+++ ||+.++.+ ..+.+||..+.+..
T Consensus 2 ~~l~vs~~~d------~~v~v~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d-------~~i~v~d~~~~~~~ 67 (391)
T 1l0q_A 2 TFAYIANSES------DNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHS-------NDVSIIDTATNNVI 67 (391)
T ss_dssp EEEEEEETTT------TEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGG-------TEEEEEETTTTEEE
T ss_pred CEEEEEcCCC------CEEEEEECCCCeEEEEeecCCC-cceEEECCCCCEEEEECCCC-------CeEEEEECCCCeEE
Confidence 4677877653 4688999988765433221111 11111122554 66665432 46899999888755
Q ss_pred eccCccceeeeeEE-ECC-EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CC-eEEEEcccCCCCce
Q 028925 94 QMKNGCVMVTAHAV-VGK-KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DG-KLLLFSLEEEPSYS 169 (202)
Q Consensus 94 ~~~~~~~~~~~~~~-~~~-~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~-~i~v~gG~~~~~~~ 169 (202)
..-+.......... .++ .|++.+ ...+.+.+||..+++-...-.. . .....++.. ++ .+|+.++. ...
T Consensus 68 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~~~v~v~d~~~~~~~~~~~~--~--~~~~~~~~s~dg~~l~~~~~~---~~~ 139 (391)
T 1l0q_A 68 ATVPAGSSPQGVAVSPDGKQVYVTN-MASSTLSVIDTTSNTVAGTVKT--G--KSPLGLALSPDGKKLYVTNNG---DKT 139 (391)
T ss_dssp EEEECSSSEEEEEECTTSSEEEEEE-TTTTEEEEEETTTTEEEEEEEC--S--SSEEEEEECTTSSEEEEEETT---TTE
T ss_pred EEEECCCCccceEECCCCCEEEEEE-CCCCEEEEEECCCCeEEEEEeC--C--CCcceEEECCCCCEEEEEeCC---CCE
Confidence 43322222222222 234 466655 3568899999998876544211 1 112233332 44 46666532 337
Q ss_pred eEEEeCCCC
Q 028925 170 TLLYDPNAA 178 (202)
Q Consensus 170 ~~~yd~~~~ 178 (202)
+.+||..++
T Consensus 140 v~~~d~~~~ 148 (391)
T 1l0q_A 140 VSVINTVTK 148 (391)
T ss_dssp EEEEETTTT
T ss_pred EEEEECCCC
Confidence 889998876
No 28
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.50 E-value=0.0063 Score=45.15 Aligned_cols=111 Identities=13% Similarity=0.173 Sum_probs=71.3
Q ss_pred ceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEe
Q 028925 7 DFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYN 86 (202)
Q Consensus 7 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd 86 (202)
+..++..+++||+....+ +.+++||+++.+-..- .+.+-....++.-+++||+..| ...+..+|
T Consensus 98 geGit~~g~~Ly~ltw~~------~~v~V~D~~Tl~~~~t--i~~~~eGwGLt~Dg~~L~vSdG--------s~~l~~iD 161 (268)
T 3nok_A 98 AEGLASDGERLYQLTWTE------GLLFTWSGMPPQRERT--TRYSGEGWGLCYWNGKLVRSDG--------GTMLTFHE 161 (268)
T ss_dssp EEEEEECSSCEEEEESSS------CEEEEEETTTTEEEEE--EECSSCCCCEEEETTEEEEECS--------SSEEEEEC
T ss_pred eeEEEEeCCEEEEEEccC------CEEEEEECCcCcEEEE--EeCCCceeEEecCCCEEEEECC--------CCEEEEEc
Confidence 345777799999985432 5799999987664322 2223334566666778888754 24699999
Q ss_pred CCCCeEEe-cc----Ccccee-eeeEEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 028925 87 PERHTWCQ-MK----NGCVMV-TAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWK 134 (202)
Q Consensus 87 ~~~~~W~~-~~----~~~~~~-~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~ 134 (202)
|++.+-.. ++ +.+... ......+++||+--. ..+.+.+.|+++.+-.
T Consensus 162 p~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw-~s~~I~vIDp~TG~V~ 214 (268)
T 3nok_A 162 PDGFALVGAVQVKLRGQPVELINELECANGVIYANIW-HSSDVLEIDPATGTVV 214 (268)
T ss_dssp TTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET-TCSEEEEECTTTCBEE
T ss_pred CCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEEC-CCCeEEEEeCCCCcEE
Confidence 99876433 22 111111 223455899996543 5789999999998743
No 29
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.49 E-value=0.011 Score=43.77 Aligned_cols=108 Identities=11% Similarity=0.028 Sum_probs=74.0
Q ss_pred eeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 028925 57 FACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWK 134 (202)
Q Consensus 57 ~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~ 134 (202)
.+...++.||+..|..+ .+.+.++|+++.+-...- +......+....+++||++.. ..+.+++||+++.+-.
T Consensus 47 GL~~~~~~LyestG~~g-----~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw-~~~~v~v~D~~t~~~~ 120 (262)
T 3nol_A 47 GFFYRNGYFYESTGLNG-----RSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW-KNGLGFVWNIRNLRQV 120 (262)
T ss_dssp EEEEETTEEEEEEEETT-----EEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES-SSSEEEEEETTTCCEE
T ss_pred eEEEECCEEEEECCCCC-----CceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe-eCCEEEEEECccCcEE
Confidence 34445889999887642 357999999998754433 222233456778999999975 5789999999887654
Q ss_pred EeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 135 MVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.-- +. + ..+.+++..++++|+..| ...++.+|+++.
T Consensus 121 ~ti-~~-~--~eG~glt~dg~~L~~SdG----s~~i~~iDp~T~ 156 (262)
T 3nol_A 121 RSF-NY-D--GEGWGLTHNDQYLIMSDG----TPVLRFLDPESL 156 (262)
T ss_dssp EEE-EC-S--SCCCCEEECSSCEEECCS----SSEEEEECTTTC
T ss_pred EEE-EC-C--CCceEEecCCCEEEEECC----CCeEEEEcCCCC
Confidence 422 11 1 255677777778888754 246899999875
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.46 E-value=0.013 Score=45.11 Aligned_cols=140 Identities=16% Similarity=0.173 Sum_probs=77.4
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCE-EEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGK-LYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
..||+.++.+ ..+.+||+.+++....-.... ......+ +++ |++.+.. ...+.+||+.+++
T Consensus 44 ~~l~~~~~~d------~~i~v~d~~~~~~~~~~~~~~---~v~~~~~spdg~~l~~~~~~-------~~~v~v~d~~~~~ 107 (391)
T 1l0q_A 44 TKVYVANAHS------NDVSIIDTATNNVIATVPAGS---SPQGVAVSPDGKQVYVTNMA-------SSTLSVIDTTSNT 107 (391)
T ss_dssp SEEEEEEGGG------TEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEETT-------TTEEEEEETTTTE
T ss_pred CEEEEECCCC------CeEEEEECCCCeEEEEEECCC---CccceEECCCCCEEEEEECC-------CCEEEEEECCCCe
Confidence 3677776543 368899998877644322222 1222222 454 5555432 2469999999887
Q ss_pred EEeccCccceeeeeEE-ECC-EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CC-eEEEEcccCCCC
Q 028925 92 WCQMKNGCVMVTAHAV-VGK-KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DG-KLLLFSLEEEPS 167 (202)
Q Consensus 92 W~~~~~~~~~~~~~~~-~~~-~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~-~i~v~gG~~~~~ 167 (202)
-............... .++ .+|+.++ ..+.+.+||..+.+....-.. . .....++.. ++ .||+.++. .
T Consensus 108 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~--~--~~~~~~~~~~dg~~l~~~~~~---~ 179 (391)
T 1l0q_A 108 VAGTVKTGKSPLGLALSPDGKKLYVTNN-GDKTVSVINTVTKAVINTVSV--G--RSPKGIAVTPDGTKVYVANFD---S 179 (391)
T ss_dssp EEEEEECSSSEEEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEEEEEC--C--SSEEEEEECTTSSEEEEEETT---T
T ss_pred EEEEEeCCCCcceEEECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEEec--C--CCcceEEECCCCCEEEEEeCC---C
Confidence 5443322222222222 244 5666664 577999999988876554311 1 111233332 34 56666532 2
Q ss_pred ceeEEEeCCCC
Q 028925 168 YSTLLYDPNAA 178 (202)
Q Consensus 168 ~~~~~yd~~~~ 178 (202)
..+.+||+.++
T Consensus 180 ~~v~~~d~~~~ 190 (391)
T 1l0q_A 180 MSISVIDTVTN 190 (391)
T ss_dssp TEEEEEETTTT
T ss_pred CEEEEEECCCC
Confidence 36899999876
No 31
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.32 E-value=0.026 Score=41.56 Aligned_cols=148 Identities=9% Similarity=0.150 Sum_probs=80.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
+++||+..... ...+.+||+..+.-..............+..-+|++|+.... ...+.+||+......
T Consensus 88 ~g~l~v~~~~~-----~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~g~~~~ 155 (286)
T 1q7f_A 88 SGDIIVTERSP-----THQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK-------VMRVIIFDQNGNVLH 155 (286)
T ss_dssp TTEEEEEECGG-----GCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT-------TTEEEEECTTSCEEE
T ss_pred CCeEEEEcCCC-----CCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECC-------CCEEEEEcCCCCEEE
Confidence 67899886321 145888996544333332211111111122236789887532 246899998765544
Q ss_pred eccC-cc-ceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCce
Q 028925 94 QMKN-GC-VMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYS 169 (202)
Q Consensus 94 ~~~~-~~-~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~ 169 (202)
.+.. .. ....+.+ ..++.||+.+. ....+.+||++......+... .......+++. .+++||+..... ...
T Consensus 156 ~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~~i~~~~~~g~~~~~~~~~--g~~~~p~~i~~d~~G~l~v~~~~~--~~~ 230 (286)
T 1q7f_A 156 KFGCSKHLEFPNGVVVNDKQEIFISDN-RAHCVKVFNYEGQYLRQIGGE--GITNYPIGVGINSNGEILIADNHN--NFN 230 (286)
T ss_dssp EEECTTTCSSEEEEEECSSSEEEEEEG-GGTEEEEEETTCCEEEEESCT--TTSCSEEEEEECTTCCEEEEECSS--SCE
T ss_pred EeCCCCccCCcEEEEECCCCCEEEEEC-CCCEEEEEcCCCCEEEEEccC--CccCCCcEEEECCCCCEEEEeCCC--CEE
Confidence 4431 11 1122222 23678998864 467899999876655555321 11122234444 367888876321 126
Q ss_pred eEEEeCCCC
Q 028925 170 TLLYDPNAA 178 (202)
Q Consensus 170 ~~~yd~~~~ 178 (202)
+.+||++..
T Consensus 231 i~~~~~~g~ 239 (286)
T 1q7f_A 231 LTIFTQDGQ 239 (286)
T ss_dssp EEEECTTSC
T ss_pred EEEECCCCC
Confidence 889997654
No 32
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.32 E-value=0.034 Score=43.75 Aligned_cols=145 Identities=10% Similarity=-0.034 Sum_probs=81.0
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeee-EEEC
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAH-AVVG 109 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~-~~~~ 109 (202)
..++++|+.+++...+....... ......-+|+.+++++..+ ....++++|..+.+-..+.......... ...+
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~-~~~~~spdg~~l~~~s~~~----g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spd 321 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNN-TEPTWFPDSQNLAFTSDQA----GRPQVYKVNINGGAPQRITWEGSQNQDADVSSD 321 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCE-EEEEECTTSSEEEEEECTT----SSCEEEEEETTSSCCEECCCSSSEEEEEEECTT
T ss_pred ceEEEEECCCCCEEeCcCCCCcc-cceEECCCCCEEEEEECCC----CCcEEEEEECCCCCEEEEecCCCcccCeEECCC
Confidence 46899999988876665432211 1111123666555543221 1346899999887755554322222222 2235
Q ss_pred CEEEEEeCCC--CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE-EECCeEEEEcccCCCCceeEEEeCCCCCCCcceee
Q 028925 110 KKLFCMEWKN--QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG-ILDGKLLLFSLEEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 110 ~~iyv~Gg~~--~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
++.++++... ...++++|.++.+...+... . .....+ .-+++.+++++.......++.+|.+.+ .-+.+
T Consensus 322 G~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~--~---~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~---~~~~l 393 (415)
T 2hqs_A 322 GKFMVMVSSNGGQQHIAKQDLATGGVQVLSST--F---LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR---FKARL 393 (415)
T ss_dssp SSEEEEEEECSSCEEEEEEETTTCCEEECCCS--S---SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC---CEEEC
T ss_pred CCEEEEEECcCCceEEEEEECCCCCEEEecCC--C---CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC---cEEEe
Confidence 5544444322 45899999999888766421 1 122222 236776666654443447999999876 66666
Q ss_pred cc
Q 028925 187 KI 188 (202)
Q Consensus 187 ~~ 188 (202)
..
T Consensus 394 ~~ 395 (415)
T 2hqs_A 394 PA 395 (415)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 33
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.26 E-value=0.011 Score=44.43 Aligned_cols=159 Identities=9% Similarity=0.048 Sum_probs=76.4
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCC-CCeEEcC----CCCCCceeeeeEE--ECCE-EEEEcCccCCCCCCcceEEEEe
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDT-DKWNLIE----SLRRPRWGCFACS--FDGK-LYVMGGRSSFTIGNSKFVDVYN 86 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~----~~~~~r~~~~~~~--~~~~-iy~~gG~~~~~~~~~~~~~~yd 86 (202)
..||+.+..+ ..+.+||+.+ .+..... ..+... ...... -+++ +|+.+.. ...+.+||
T Consensus 141 ~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~pdg~~l~~~~~~-------~~~i~~~~ 206 (343)
T 1ri6_A 141 RTLWVPALKQ------DRICLFTVSDDGHLVAQDPAEVTTVEGA-GPRHMVFHPNEQYAYCVNEL-------NSSVDVWE 206 (343)
T ss_dssp SEEEEEEGGG------TEEEEEEECTTSCEEEEEEEEEECSTTC-CEEEEEECTTSSEEEEEETT-------TTEEEEEE
T ss_pred CEEEEecCCC------CEEEEEEecCCCceeeecccccccCCCC-CcceEEECCCCCEEEEEeCC-------CCEEEEEE
Confidence 3566654221 3588888877 6664322 111111 111222 2454 6666432 24577888
Q ss_pred CC--CCeEEecc-----Ccc----ceeeeeEE-ECC-EEEEEeCCCCCeEEEEeCC--CCcEEEeccCCCCCCCCCeeEE
Q 028925 87 PE--RHTWCQMK-----NGC----VMVTAHAV-VGK-KLFCMEWKNQRKLTIFDPE--DNSWKMVPVPLTGSSSIGFRFG 151 (202)
Q Consensus 87 ~~--~~~W~~~~-----~~~----~~~~~~~~-~~~-~iyv~Gg~~~~~~~~yd~~--~~~W~~~~~~~~~~~~~~~~~~ 151 (202)
.. +.++.... +.. ........ .++ .||+.+. ..+.+.+||.. +.+++.+....... . ...++
T Consensus 207 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~-~~~~i~v~d~~~~~~~~~~~~~~~~~~-~-~~~~~ 283 (343)
T 1ri6_A 207 LKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR-TASLITVFSVSEDGSVLSKEGFQPTET-Q-PRGFN 283 (343)
T ss_dssp SSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET-TTTEEEEEEECTTSCCEEEEEEEECSS-S-CCCEE
T ss_pred ecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec-CCCEEEEEEEcCCCCceEEeeeecCCC-c-cceEE
Confidence 74 34443222 111 11111222 234 5666553 46788888887 55666664211111 1 12233
Q ss_pred E-ECCe-EEEEcccCCCCceeEEEeCCCCCCCcceeecccCCcee
Q 028925 152 I-LDGK-LLLFSLEEEPSYSTLLYDPNAASGSEWQTSKIKPSGLC 194 (202)
Q Consensus 152 ~-~~~~-i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~~~~p~~~~ 194 (202)
. -+++ ||+.+ .......++.+|++++ +++.+...+.+..
T Consensus 284 ~s~dg~~l~~~~-~~~~~v~v~~~d~~~g---~~~~~~~~~~g~~ 324 (343)
T 1ri6_A 284 VDHSGKYLIAAG-QKSHHISVYEIVGEQG---LLHEKGRYAVGQG 324 (343)
T ss_dssp ECTTSSEEEEEC-TTTCEEEEEEEETTTT---EEEEEEEEECSSS
T ss_pred ECCCCCEEEEec-CCCCeEEEEEEcCCCc---eeeEccccccCCC
Confidence 3 2454 55544 2222334555588887 8888865554433
No 34
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=97.26 E-value=0.036 Score=41.83 Aligned_cols=152 Identities=9% Similarity=-0.043 Sum_probs=78.7
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECC-EEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDG-KLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~-~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
++.||+.............++++|+.+.+-...-+.... ....+..-++ .+|+.+.. ...+.+||+.+.+-
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~v~~~~-------~~~v~~~d~~~~~~ 123 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK-PFGATINNTTQTLWFGNTV-------NSAVTAIDAKTGEV 123 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC-CCSEEEETTTTEEEEEETT-------TTEEEEEETTTCCE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC-cceEEECCCCCEEEEEecC-------CCEEEEEeCCCCee
Confidence 357888753321111246799999998775433222111 1112222344 47776543 24689999988764
Q ss_pred Ee-cc-Cccc--------eeeeeEE-E-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEE
Q 028925 93 CQ-MK-NGCV--------MVTAHAV-V-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLF 160 (202)
Q Consensus 93 ~~-~~-~~~~--------~~~~~~~-~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~ 160 (202)
.. ++ .... ....... . ++.+|+.+......++.||+++.+-...- +.....-...++...++.+|+.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI-QNTGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE-CCCCTTCCCCEEETTTTEEEEE
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe-cCCCCccceEEECCCCCEEEEE
Confidence 22 22 1110 1122222 2 35688776335678999999877644432 2112111122222234556665
Q ss_pred cccCCCCceeEEEeCCCC
Q 028925 161 SLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 161 gG~~~~~~~~~~yd~~~~ 178 (202)
.. ...+.+||+++.
T Consensus 203 ~~----~~~i~~~d~~~~ 216 (353)
T 3vgz_A 203 NA----DGELITIDTADN 216 (353)
T ss_dssp CT----TSEEEEEETTTT
T ss_pred cC----CCeEEEEECCCC
Confidence 42 336888998876
No 35
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.26 E-value=0.03 Score=44.17 Aligned_cols=144 Identities=14% Similarity=0.212 Sum_probs=75.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
+++.++.|+.+ ..+.+||+.+.+-.. .+...........+++..++.|+.+ ..+.+||..+.+-.
T Consensus 248 ~~~~l~~~~~d------g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 248 DGRRVVSGAYD------FMVKVWDPETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLD-------TSIRVWDVETGNCI 312 (445)
T ss_dssp CSSCEEEEETT------SCEEEEEGGGTEEEE--EECCCSSCEEEEEECSSEEEEEETT-------SCEEEEETTTCCEE
T ss_pred CCCEEEEEcCC------CEEEEEECCCCcEeE--EecCCCCceEEEEECCCEEEEEeCC-------CeEEEEECCCCCEE
Confidence 55555555432 346777776554321 1111112223334577777666543 45888998776533
Q ss_pred ec-cCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEE
Q 028925 94 QM-KNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLL 172 (202)
Q Consensus 94 ~~-~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~ 172 (202)
.. ........ ....++..++.|+ ..+.+.+||..+.+-...-.. ..........+..+++.++.|+.. ..+.+
T Consensus 313 ~~~~~~~~~v~-~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~l~s~~~d---g~v~i 386 (445)
T 2ovr_B 313 HTLTGHQSLTS-GMELKDNILVSGN-ADSTVKIWDIKTGQCLQTLQG-PNKHQSAVTCLQFNKNFVITSSDD---GTVKL 386 (445)
T ss_dssp EEECCCCSCEE-EEEEETTEEEEEE-TTSCEEEEETTTCCEEEEECS-TTSCSSCEEEEEECSSEEEEEETT---SEEEE
T ss_pred EEEcCCcccEE-EEEEeCCEEEEEe-CCCeEEEEECCCCcEEEEEcc-CCCCCCCEEEEEECCCEEEEEeCC---CeEEE
Confidence 22 11111112 2233444555554 577899999977654332111 111123334445577777777543 37889
Q ss_pred EeCCCC
Q 028925 173 YDPNAA 178 (202)
Q Consensus 173 yd~~~~ 178 (202)
||..++
T Consensus 387 wd~~~~ 392 (445)
T 2ovr_B 387 WDLKTG 392 (445)
T ss_dssp EETTTC
T ss_pred EECCCC
Confidence 998876
No 36
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.21 E-value=0.033 Score=40.47 Aligned_cols=143 Identities=8% Similarity=0.057 Sum_probs=76.2
Q ss_pred CCEEEE-EcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYA-VGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv-~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++||+ ....+ ..+.+||+.+............. -..++. -+++||+... . ..+.+||+.+..
T Consensus 34 ~g~l~v~~~~~~------~~i~~~~~~~~~~~~~~~~~~~~-p~~i~~~~~g~l~v~~~-~-------~~i~~~d~~~~~ 98 (270)
T 1rwi_B 34 AGNVYVTSEGMY------GRVVKLATGSTGTTVLPFNGLYQ-PQGLAVDGAGTVYVTDF-N-------NRVVTLAAGSNN 98 (270)
T ss_dssp TCCEEEEECSSS------CEEEEECC-----EECCCCSCCS-CCCEEECTTCCEEEEET-T-------TEEEEECTTCSC
T ss_pred CCCEEEEccCCC------CcEEEecCCCcccceEeeCCcCC-cceeEECCCCCEEEEcC-C-------CEEEEEeCCCce
Confidence 578998 53321 45888998776655443211111 112222 3678888754 1 368899988776
Q ss_pred EEeccCcc-ceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCCCCc
Q 028925 92 WCQMKNGC-VMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEEPSY 168 (202)
Q Consensus 92 W~~~~~~~-~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~ 168 (202)
........ ....+..+. +++||+... ....+.+||..+......... . .....+++.. +++||+.... ..
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~~i~~~~~~~~~~~~~~~~--~-~~~p~~i~~~~~g~l~v~~~~---~~ 171 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGAVYVADR-GNNRVVKLAAGSKTQTVLPFT--G-LNDPDGVAVDNSGNVYVTDTD---NN 171 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCCEEEEEG-GGTEEEEECTTCCSCEECCCC--S-CCSCCCEEECTTCCEEEEEGG---GT
T ss_pred EeeeecCCcCCCcceEECCCCCEEEEEC-CCCEEEEEECCCceeEeeccc--c-CCCceeEEEeCCCCEEEEECC---CC
Confidence 54443211 122233332 678998863 356788898776655443211 1 1122234443 6788887532 23
Q ss_pred eeEEEeCCCC
Q 028925 169 STLLYDPNAA 178 (202)
Q Consensus 169 ~~~~yd~~~~ 178 (202)
.+.+||+++.
T Consensus 172 ~i~~~~~~~~ 181 (270)
T 1rwi_B 172 RVVKLEAESN 181 (270)
T ss_dssp EEEEECTTTC
T ss_pred EEEEEecCCC
Confidence 6888998775
No 37
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.18 E-value=0.034 Score=43.76 Aligned_cols=143 Identities=15% Similarity=0.070 Sum_probs=78.3
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCE-EEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeE-EE
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGK-LYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHA-VV 108 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~ 108 (202)
..++++|+.+.+...+...+... ...+..-+|+ |++.+..+ ....++++|..+.+...+........... ..
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~-~~~~~spdg~~la~~~~~~-----g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~sp 276 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHN-GAPAFSPDGSKLAFALSKT-----GSLNLYVMDLASGQIRQVTDGRSNNTEPTWFP 276 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCE-EEEEECTTSSEEEEEECTT-----SSCEEEEEETTTCCEEECCCCSSCEEEEEECT
T ss_pred cEEEEEECCCCcEEEeecCCCcc-cCEEEcCCCCEEEEEEecC-----CCceEEEEECCCCCEEeCcCCCCcccceEECC
Confidence 47899999988877665433211 1111123566 44343322 23469999999888777664332222222 23
Q ss_pred CCEEEEEeCC--CCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE-EECCeEEEEcccCCCCceeEEEeCCCCCCCccee
Q 028925 109 GKKLFCMEWK--NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG-ILDGKLLLFSLEEEPSYSTLLYDPNAASGSEWQT 185 (202)
Q Consensus 109 ~~~iyv~Gg~--~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~ 185 (202)
+++.++++.. ....++.+|..+..-+.+.. .. .....++ ..+++.+++++.......++++|++++ +.+.
T Consensus 277 dg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~--~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~---~~~~ 349 (415)
T 2hqs_A 277 DSQNLAFTSDQAGRPQVYKVNINGGAPQRITW--EG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG---GVQV 349 (415)
T ss_dssp TSSEEEEEECTTSSCEEEEEETTSSCCEECCC--SS--SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC---CEEE
T ss_pred CCCEEEEEECCCCCcEEEEEECCCCCEEEEec--CC--CcccCeEECCCCCEEEEEECcCCceEEEEEECCCC---CEEE
Confidence 5554444332 23478889998877555431 11 1111222 236665555544333457999999887 6665
Q ss_pred e
Q 028925 186 S 186 (202)
Q Consensus 186 ~ 186 (202)
+
T Consensus 350 l 350 (415)
T 2hqs_A 350 L 350 (415)
T ss_dssp C
T ss_pred e
Confidence 5
No 38
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.18 E-value=0.024 Score=44.59 Aligned_cols=148 Identities=13% Similarity=0.223 Sum_probs=79.8
Q ss_pred EEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 10 CAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 10 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+...+++.++.|+.+ ..+.+||..+.+-... +........+..+++++++.|+.+ ..+.+||..+
T Consensus 138 ~~~~d~~~l~~g~~d------g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~d-------g~i~vwd~~~ 202 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD------NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSD-------STVRVWDVNT 202 (435)
T ss_dssp EEECCSSEEEEEESS------SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETT-------SCEEEEESSS
T ss_pred EEEECCCEEEEEeCC------CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCC-------CeEEEEECCC
Confidence 344577777777754 3588889887664332 111222223344578887777643 4688999887
Q ss_pred CeEEecc-CccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCc
Q 028925 90 HTWCQMK-NGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSY 168 (202)
Q Consensus 90 ~~W~~~~-~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~ 168 (202)
.+-...- ....... ...+.+..++.|+ ..+.+.+||..+..-......... .......+..+++.++.|+.. .
T Consensus 203 ~~~~~~~~~h~~~v~-~l~~~~~~l~s~s-~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~s~~~d---g 276 (435)
T 1p22_A 203 GEMLNTLIHHCEAVL-HLRFNNGMMVTCS-KDRSIAVWDMASPTDITLRRVLVG-HRAAVNVVDFDDKYIVSASGD---R 276 (435)
T ss_dssp CCEEEEECCCCSCEE-EEECCTTEEEEEE-TTSCEEEEECSSSSCCEEEEEECC-CSSCEEEEEEETTEEEEEETT---S
T ss_pred CcEEEEEcCCCCcEE-EEEEcCCEEEEee-CCCcEEEEeCCCCCCceeeeEecC-CCCcEEEEEeCCCEEEEEeCC---C
Confidence 7533222 1111112 2233444555554 678899999877653221101111 122233333466666666432 2
Q ss_pred eeEEEeCCCC
Q 028925 169 STLLYDPNAA 178 (202)
Q Consensus 169 ~~~~yd~~~~ 178 (202)
.+.+||..+.
T Consensus 277 ~i~vwd~~~~ 286 (435)
T 1p22_A 277 TIKVWNTSTC 286 (435)
T ss_dssp EEEEEETTTC
T ss_pred eEEEEECCcC
Confidence 6788888765
No 39
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.16 E-value=0.0089 Score=45.14 Aligned_cols=148 Identities=7% Similarity=0.042 Sum_probs=80.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
+++||+.+..+ ..+++||+.+++...............+..-+|++|+....... ....+.+||+.+.+..
T Consensus 55 ~g~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~---~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 55 QGQLFLLDVFE------GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFK---STGGIFAATENGDNLQ 125 (333)
T ss_dssp TSCEEEEETTT------CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSS---SCCEEEEECTTSCSCE
T ss_pred CCCEEEEECCC------CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCC---CCceEEEEeCCCCEEE
Confidence 57888876532 36899999998877653211111111112237788887532211 1246899999887655
Q ss_pred ec-c-C-ccceeeee-EEECCEEEEEeCC-----CCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECC-eEEEEcc
Q 028925 94 QM-K-N-GCVMVTAH-AVVGKKLFCMEWK-----NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDG-KLLLFSL 162 (202)
Q Consensus 94 ~~-~-~-~~~~~~~~-~~~~~~iyv~Gg~-----~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~-~i~v~gG 162 (202)
.+ . . ........ ...++++|+.... ....++.+|+++.+...+.... .....++. .++ .||+...
T Consensus 126 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 126 DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI----SVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE----SSEEEEEECTTSSEEEEEEG
T ss_pred EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC----CcccceEECCCCCEEEEEeC
Confidence 22 2 1 11111222 2236788886531 1357899999887776653111 11122332 244 4777642
Q ss_pred cCCCCceeEEEeCCC
Q 028925 163 EEEPSYSTLLYDPNA 177 (202)
Q Consensus 163 ~~~~~~~~~~yd~~~ 177 (202)
. ...+++||+.+
T Consensus 202 ~---~~~i~~~d~~~ 213 (333)
T 2dg1_A 202 T---ANRLHRIALED 213 (333)
T ss_dssp G---GTEEEEEEECT
T ss_pred C---CCeEEEEEecC
Confidence 2 23688888854
No 40
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.12 E-value=0.045 Score=40.23 Aligned_cols=147 Identities=8% Similarity=0.043 Sum_probs=81.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++||+..... ..+.+||+. ++............-..++. -++++|+.... ...+.+||+. .+.
T Consensus 72 ~g~l~v~~~~~------~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 72 LGDIWFTENGA------NKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN-------GDRIGKLTAD-GTI 136 (300)
T ss_dssp TSCEEEEETTT------TEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT-------TTEEEEECTT-SCE
T ss_pred CCCEEEEecCC------CeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC-------CCeEEEECCC-CCE
Confidence 56788875321 358899988 77764432111111122222 36889987432 2368899987 555
Q ss_pred Eecc-Cc-cceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCCCCc
Q 028925 93 CQMK-NG-CVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEEPSY 168 (202)
Q Consensus 93 ~~~~-~~-~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~ 168 (202)
.... +. ......... .+++||+... ....+.+||+ +.+......+.. .....+++.. ++.||+... ...
T Consensus 137 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~-~~~~i~~~~~-~g~~~~~~~~~~--~~~~~~i~~d~~g~l~v~~~---~~~ 209 (300)
T 2qc5_A 137 YEYDLPNKGSYPAFITLGSDNALWFTEN-QNNSIGRITN-TGKLEEYPLPTN--AAAPVGITSGNDGALWFVEI---MGN 209 (300)
T ss_dssp EEEECSSTTCCEEEEEECTTSSEEEEET-TTTEEEEECT-TCCEEEEECSST--TCCEEEEEECTTSSEEEEET---TTT
T ss_pred EEccCCCCCCCceeEEECCCCCEEEEec-CCCeEEEECC-CCcEEEeeCCCC--CCCcceEEECCCCCEEEEcc---CCC
Confidence 5432 21 112222222 3577888753 3568999999 667666542211 1223344443 678888652 133
Q ss_pred eeEEEeCCCCCCCcceee
Q 028925 169 STLLYDPNAASGSEWQTS 186 (202)
Q Consensus 169 ~~~~yd~~~~~~~~W~~~ 186 (202)
.+.+||+ ++ +....
T Consensus 210 ~i~~~~~-~g---~~~~~ 223 (300)
T 2qc5_A 210 KIGRITT-TG---EISEY 223 (300)
T ss_dssp EEEEECT-TC---CEEEE
T ss_pred EEEEEcC-CC---cEEEE
Confidence 6888998 44 55554
No 41
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.10 E-value=0.06 Score=41.42 Aligned_cols=148 Identities=9% Similarity=0.115 Sum_probs=87.5
Q ss_pred EEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCCCCc--------eeeeeEEECCEEEEEcCccCCCCCC
Q 028925 9 ACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLRRPR--------WGCFACSFDGKLYVMGGRSSFTIGN 78 (202)
Q Consensus 9 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r--------~~~~~~~~~~~iy~~gG~~~~~~~~ 78 (202)
+.+..++.||+... + ..+..+|+.+.+ |+.-...+... .....+..++.+|+.+.
T Consensus 183 ~~~~~~~~v~~g~~-~------g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-------- 247 (376)
T 3q7m_A 183 APTTAFGAAVVGGD-N------GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-------- 247 (376)
T ss_dssp CCEEETTEEEECCT-T------TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT--------
T ss_pred CcEEECCEEEEEcC-C------CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec--------
Confidence 33455777777321 1 358889988765 65543222111 12333456888888642
Q ss_pred cceEEEEeCCCC--eEEeccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc--EEEeccCCCCCCCCCeeEEEEC
Q 028925 79 SKFVDVYNPERH--TWCQMKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNS--WKMVPVPLTGSSSIGFRFGILD 154 (202)
Q Consensus 79 ~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~ 154 (202)
...+.++|+.+. .|+.-.+. .......++.||+.. ....+..+|+++.+ |+.-.. .. ......+..+
T Consensus 248 ~g~l~~~d~~tG~~~w~~~~~~---~~~~~~~~~~l~~~~--~~g~l~~~d~~tG~~~w~~~~~--~~--~~~~~~~~~~ 318 (376)
T 3q7m_A 248 NGNLTALDLRSGQIMWKRELGS---VNDFIVDGNRIYLVD--QNDRVMALTIDGGVTLWTQSDL--LH--RLLTSPVLYN 318 (376)
T ss_dssp TSCEEEEETTTCCEEEEECCCC---EEEEEEETTEEEEEE--TTCCEEEEETTTCCEEEEECTT--TT--SCCCCCEEET
T ss_pred CcEEEEEECCCCcEEeeccCCC---CCCceEECCEEEEEc--CCCeEEEEECCCCcEEEeeccc--CC--CcccCCEEEC
Confidence 235889998766 47654321 233456688999875 45689999998776 765421 11 2223344678
Q ss_pred CeEEEEcccCCCCceeEEEeCCCCCCCccee
Q 028925 155 GKLLLFSLEEEPSYSTLLYDPNAASGSEWQT 185 (202)
Q Consensus 155 ~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~ 185 (202)
++||+... ...++.+|++++. -.|+.
T Consensus 319 ~~l~v~~~----~g~l~~~d~~tG~-~~~~~ 344 (376)
T 3q7m_A 319 GNLVVGDS----EGYLHWINVEDGR-FVAQQ 344 (376)
T ss_dssp TEEEEECT----TSEEEEEETTTCC-EEEEE
T ss_pred CEEEEEeC----CCeEEEEECCCCc-EEEEE
Confidence 99888642 2368999988761 13654
No 42
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.09 E-value=0.0045 Score=46.75 Aligned_cols=146 Identities=12% Similarity=0.021 Sum_probs=74.4
Q ss_pred EECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeE-EECCE-EEEEcCccCCCCCCcceEEEEeCCC
Q 028925 12 EVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFAC-SFDGK-LYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 12 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~-~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
..++++|+.++.+ ..++++|+.+++....-+++........+ .-+++ +|+.+.. ...+.+||+.+
T Consensus 8 ~~~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-------~~~i~~~d~~t 74 (349)
T 1jmx_B 8 KAGHEYMIVTNYP------NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-------YGDIYGIDLDT 74 (349)
T ss_dssp CTTCEEEEEEETT------TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-------TTEEEEEETTT
T ss_pred cCCCEEEEEeCCC------CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-------CCcEEEEeCCC
Confidence 3467888887643 46899999988764332222200111222 23554 6766532 24699999988
Q ss_pred CeEEeccCcc-------ceeeeeE-EECC-EEEEEeCC----------CCCeEEEEeCCCCcEEEe-ccCCCCCCCCCee
Q 028925 90 HTWCQMKNGC-------VMVTAHA-VVGK-KLFCMEWK----------NQRKLTIFDPEDNSWKMV-PVPLTGSSSIGFR 149 (202)
Q Consensus 90 ~~W~~~~~~~-------~~~~~~~-~~~~-~iyv~Gg~----------~~~~~~~yd~~~~~W~~~-~~~~~~~~~~~~~ 149 (202)
.+-...-+.. ....... ..++ .||+.... ....+.+||+++.+-... .....+ ..-.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~ 152 (349)
T 1jmx_B 75 CKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP--RQVYL 152 (349)
T ss_dssp TEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC--SSCCC
T ss_pred CcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC--Ccccc
Confidence 7654322111 1111222 2244 56655411 146899999876432111 100011 11122
Q ss_pred EE-EECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 150 FG-ILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 150 ~~-~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
++ ..++++|+.++ .+++||+++.
T Consensus 153 ~~~s~dg~l~~~~~------~i~~~d~~~~ 176 (349)
T 1jmx_B 153 MRAADDGSLYVAGP------DIYKMDVKTG 176 (349)
T ss_dssp EEECTTSCEEEESS------SEEEECTTTC
T ss_pred eeECCCCcEEEccC------cEEEEeCCCC
Confidence 22 23667777432 3888888775
No 43
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.97 E-value=0.039 Score=41.80 Aligned_cols=163 Identities=11% Similarity=0.143 Sum_probs=77.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCC-CCCeEEcCC--CCCC-ceeeeeEEECCE-EEEEcCccCCCCCCcceEEEE--e
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPD-TDKWNLIES--LRRP-RWGCFACSFDGK-LYVMGGRSSFTIGNSKFVDVY--N 86 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~--~~~~-r~~~~~~~~~~~-iy~~gG~~~~~~~~~~~~~~y--d 86 (202)
++++|+.+..+ ..+.+||+. +.+...... .+.. .-.+.+..-+|+ +|+.+... ..+.+| +
T Consensus 151 dg~l~v~~~~~------~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-------~~v~v~~~~ 217 (347)
T 3hfq_A 151 DNRLAVIDLGS------DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-------SQIASLKYD 217 (347)
T ss_dssp TSCEEEEETTT------TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-------TEEEEEEEE
T ss_pred CCcEEEEeCCC------CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-------CEEEEEEec
Confidence 66777765322 357788877 555554322 1111 111222233666 77654322 234444 4
Q ss_pred CCCCeEEecc---Ccc------ceeeee-EEECC-EEEEEeCCCCCeEEEEeCCCC-cEEEeccCCCCCCCCCeeEEE-E
Q 028925 87 PERHTWCQMK---NGC------VMVTAH-AVVGK-KLFCMEWKNQRKLTIFDPEDN-SWKMVPVPLTGSSSIGFRFGI-L 153 (202)
Q Consensus 87 ~~~~~W~~~~---~~~------~~~~~~-~~~~~-~iyv~Gg~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~-~ 153 (202)
..+.++..+. ..+ ...... ...++ .||+.+. ..+.+.+||.+.+ +.+.+...... ......++. -
T Consensus 218 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~-~~~~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~sp 295 (347)
T 3hfq_A 218 TQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR-GYNTLAVFAVTADGHLTLIQQISTE-GDFPRDFDLDP 295 (347)
T ss_dssp TTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE-TTTEEEEEEECGGGCEEEEEEEECS-SSCCCEEEECT
T ss_pred CCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC-CCCEEEEEEECCCCcEEEeEEEecC-CCCcCeEEECC
Confidence 4456665443 111 111122 22355 4777653 4678888987633 55555421111 111123333 3
Q ss_pred CCe-EEEEcccCCCCceeEEEeCCCCCCCcceee---cccCCceee
Q 028925 154 DGK-LLLFSLEEEPSYSTLLYDPNAASGSEWQTS---KIKPSGLCL 195 (202)
Q Consensus 154 ~~~-i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~---~~~p~~~~~ 195 (202)
+++ ||+.+ .......++..|++++ +-+.+ ..+|.+.+-
T Consensus 296 dg~~l~v~~-~~~~~v~v~~~d~~tg---~l~~~~~~~~~p~p~~~ 337 (347)
T 3hfq_A 296 TEAFVVVVN-QNTDNATLYARDLTSG---KLSLLQKDVTVPEGVCV 337 (347)
T ss_dssp TSSEEEEEE-TTTTEEEEEEECTTTC---CEEEEEEEEECTTEEEE
T ss_pred CCCEEEEEE-cCCCcEEEEEEeCCCC---eEEecccceecCCCcEE
Confidence 555 55554 2222223444488877 77765 345655553
No 44
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.96 E-value=0.065 Score=39.39 Aligned_cols=147 Identities=8% Similarity=0.059 Sum_probs=80.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCC---CCCceee-eeEE--ECCEEEEEcCccCCCCCCcceEEEEeC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESL---RRPRWGC-FACS--FDGKLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---~~~r~~~-~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
+++||+....+ ..+.+||+..+.-...... ....... .++. -+++||+.+... ...+.+||+
T Consensus 40 ~g~l~v~~~~~------~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~------~~~i~~~d~ 107 (286)
T 1q7f_A 40 QNDIIVADTNN------HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP------THQIQIYNQ 107 (286)
T ss_dssp TCCEEEEEGGG------TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG------GCEEEEECT
T ss_pred CCCEEEEECCC------CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC------CCEEEEECC
Confidence 57888875432 3588999875443333221 1111122 2233 368899876321 246889996
Q ss_pred CCCeEEeccCcc-ceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccC
Q 028925 88 ERHTWCQMKNGC-VMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEE 164 (202)
Q Consensus 88 ~~~~W~~~~~~~-~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~ 164 (202)
....-..+.... .......+ .++++|+... ....+.+||++.......... .......+++.. ++++|+....
T Consensus 108 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~~~~g~~~~~~~~~--~~~~~p~~i~~~~~g~l~v~~~~- 183 (286)
T 1q7f_A 108 YGQFVRKFGATILQHPRGVTVDNKGRIIVVEC-KVMRVIIFDQNGNVLHKFGCS--KHLEFPNGVVVNDKQEIFISDNR- 183 (286)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEET-TTTEEEEECTTSCEEEEEECT--TTCSSEEEEEECSSSEEEEEEGG-
T ss_pred CCcEEEEecCccCCCceEEEEeCCCCEEEEEC-CCCEEEEEcCCCCEEEEeCCC--CccCCcEEEEECCCCCEEEEECC-
Confidence 555443333111 11222222 3678998864 457899999876655555321 111222334433 5789887532
Q ss_pred CCCceeEEEeCCCC
Q 028925 165 EPSYSTLLYDPNAA 178 (202)
Q Consensus 165 ~~~~~~~~yd~~~~ 178 (202)
...+.+||++.+
T Consensus 184 --~~~i~~~~~~g~ 195 (286)
T 1q7f_A 184 --AHCVKVFNYEGQ 195 (286)
T ss_dssp --GTEEEEEETTCC
T ss_pred --CCEEEEEcCCCC
Confidence 336899998664
No 45
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.95 E-value=0.07 Score=39.61 Aligned_cols=108 Identities=12% Similarity=0.037 Sum_probs=70.9
Q ss_pred eeEEEC-CEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc--CccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcE
Q 028925 57 FACSFD-GKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK--NGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSW 133 (202)
Q Consensus 57 ~~~~~~-~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W 133 (202)
.+...+ +.||+..|.. ....+.++|+.+++-...- +......+....+++||+... ..+.+.+||+++.+=
T Consensus 25 Gl~~~~dg~Lyvstg~~-----~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~-~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLY-----GRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVW-LKNIGFIYDRRTLSN 98 (266)
T ss_dssp EEEECSTTEEEEEECST-----TTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEET-TCSEEEEEETTTTEE
T ss_pred cEEEeCCCeEEEECCCC-----CCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEe-cCCEEEEEECCCCcE
Confidence 444434 8999987642 1357999999998754432 222233455667889999974 678999999987653
Q ss_pred EE-eccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 134 KM-VPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 134 ~~-~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.. ++.+ ...+.+++..++++|+..| ...+.++|+++.
T Consensus 99 ~~~i~~g----~~~g~glt~Dg~~l~vs~g----s~~l~viD~~t~ 136 (266)
T 2iwa_A 99 IKNFTHQ----MKDGWGLATDGKILYGSDG----TSILYEIDPHTF 136 (266)
T ss_dssp EEEEECC----SSSCCEEEECSSSEEEECS----SSEEEEECTTTC
T ss_pred EEEEECC----CCCeEEEEECCCEEEEECC----CCeEEEEECCCC
Confidence 32 3211 1234566666788998653 347999999885
No 46
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.94 E-value=0.06 Score=41.96 Aligned_cols=147 Identities=11% Similarity=0.055 Sum_probs=80.4
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCC---CCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLR---RPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~---~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
++++++.++.+ ..+.+||+.+.+.....+.. ..........+ ++++++.++.+ ..+.+||..
T Consensus 133 ~~~~~~~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-------~~v~~~d~~ 199 (433)
T 3bws_A 133 NTRLAIPLLED------EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-------NAVHVFDLK 199 (433)
T ss_dssp SSEEEEEBTTS------SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-------TEEEEEETT
T ss_pred CCeEEEEeCCC------CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-------CEEEEEECC
Confidence 67888877643 35899999988876543321 11222222333 77888777543 468999988
Q ss_pred CCeEEec-cCccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccC
Q 028925 89 RHTWCQM-KNGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEE 164 (202)
Q Consensus 89 ~~~W~~~-~~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~ 164 (202)
+.+-... ............. +..+|+.+. ..+.+.+||+.+.+....- +. . .....++.. +++.+++++..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~i~~~d~~~~~~~~~~-~~-~--~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 200 TLAYKATVDLTGKWSKILLYDPIRDLVYCSNW-ISEDISVIDRKTKLEIRKT-DK-I--GLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp TCCEEEEEECSSSSEEEEEEETTTTEEEEEET-TTTEEEEEETTTTEEEEEC-CC-C--SEEEEEEECTTSSEEEEEEEE
T ss_pred CceEEEEEcCCCCCeeEEEEcCCCCEEEEEec-CCCcEEEEECCCCcEEEEe-cC-C--CCceEEEEcCCCCEEEEEECC
Confidence 7653322 2112222222222 345666653 5678999999887654432 11 1 112222222 45444444322
Q ss_pred C-----CCceeEEEeCCCC
Q 028925 165 E-----PSYSTLLYDPNAA 178 (202)
Q Consensus 165 ~-----~~~~~~~yd~~~~ 178 (202)
. ....+.+||+.++
T Consensus 275 ~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp SCTTCSCCEEEEEEETTTT
T ss_pred CCccccCCCeEEEEECCCC
Confidence 1 1237889999876
No 47
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.93 E-value=0.064 Score=40.68 Aligned_cols=146 Identities=14% Similarity=0.161 Sum_probs=77.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++++++|+.+ ..+.+||+.+.+++.+..+........... -++++++.|+.+ ..+.+||..+.+
T Consensus 19 ~~~~l~~~~~d------~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~ 85 (372)
T 1k8k_C 19 DRTQIAICPNN------HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-------RNAYVWTLKGRT 85 (372)
T ss_dssp TSSEEEEECSS------SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-------SCEEEEEEETTE
T ss_pred CCCEEEEEeCC------CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-------CeEEEEECCCCe
Confidence 66777777653 468889998887665544432222222222 266677666543 458889988887
Q ss_pred EEecc---CccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCc-EEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCC
Q 028925 92 WCQMK---NGCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNS-WKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEE 165 (202)
Q Consensus 92 W~~~~---~~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~ 165 (202)
+.... ........... .++..++.|+ ..+.+.+||..+.. |........+....-.+++.. +++.++.|+..
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d- 163 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD- 163 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT-
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC-
Confidence 65543 11111222222 2555666654 45677777776554 433321111111212222222 56777776542
Q ss_pred CCceeEEEeCC
Q 028925 166 PSYSTLLYDPN 176 (202)
Q Consensus 166 ~~~~~~~yd~~ 176 (202)
..+.+||..
T Consensus 164 --g~i~~~d~~ 172 (372)
T 1k8k_C 164 --FKCRIFSAY 172 (372)
T ss_dssp --SCEEEEECC
T ss_pred --CCEEEEEcc
Confidence 257788853
No 48
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.90 E-value=0.078 Score=39.44 Aligned_cols=146 Identities=14% Similarity=0.117 Sum_probs=73.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++++++.|+.+ ..+.+||+.+.+-... ++.......... -++++++.|+.+ ..+.+||..+.+
T Consensus 118 ~~~~l~s~~~d------~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~wd~~~~~ 182 (312)
T 4ery_A 118 QSNLIVSGSFD------ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD-------GLCRIWDTASGQ 182 (312)
T ss_dssp SSSEEEEEETT------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCC
T ss_pred CCCEEEEEeCC------CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCc
Confidence 34555555543 3578889887654322 111111112222 266677766543 458899988765
Q ss_pred EEecc--Cccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEec-cCCCCCCCCCeeEEEECCeEEEEcccCCCC
Q 028925 92 WCQMK--NGCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVP-VPLTGSSSIGFRFGILDGKLLLFSLEEEPS 167 (202)
Q Consensus 92 W~~~~--~~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~ 167 (202)
-...- ......... ...++..++.++ ..+.+.+||..+.+-...- ................++++++.|+..
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~d--- 258 (312)
T 4ery_A 183 CLKTLIDDDNPPVSFVKFSPNGKYILAAT-LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED--- 258 (312)
T ss_dssp EEEEECCSSCCCEEEEEECTTSSEEEEEE-TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTT---
T ss_pred eeeEEeccCCCceEEEEECCCCCEEEEEc-CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCC---
Confidence 43221 111111111 223555555554 5778999999877643322 111111111122222466777777542
Q ss_pred ceeEEEeCCCC
Q 028925 168 YSTLLYDPNAA 178 (202)
Q Consensus 168 ~~~~~yd~~~~ 178 (202)
..+.+||.++.
T Consensus 259 g~i~vwd~~~~ 269 (312)
T 4ery_A 259 NLVYIWNLQTK 269 (312)
T ss_dssp SCEEEEETTTC
T ss_pred CEEEEEECCCc
Confidence 25788888765
No 49
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.89 E-value=0.065 Score=40.56 Aligned_cols=137 Identities=10% Similarity=0.101 Sum_probs=70.0
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCc-eeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccC---ccceeeee-
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPR-WGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKN---GCVMVTAH- 105 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r-~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~~~~~- 105 (202)
-.+|.+|..+++++.+....... -...+..-+|+||+.+... ....+.+||..+.+++.+.. ........
T Consensus 18 i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~-----~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 18 IYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED-----DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET-----TEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred EEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC-----CCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 45788898888886643211111 1112222378877765321 23578999988877766542 11111222
Q ss_pred EEECC-EEEEEeCCCCCeEEEEeCC-CCcEEEecc-CCCCC------CC-CCeeEEE-ECCeEEEEcccCCCCceeEEEe
Q 028925 106 AVVGK-KLFCMEWKNQRKLTIFDPE-DNSWKMVPV-PLTGS------SS-IGFRFGI-LDGKLLLFSLEEEPSYSTLLYD 174 (202)
Q Consensus 106 ~~~~~-~iyv~Gg~~~~~~~~yd~~-~~~W~~~~~-~~~~~------~~-~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd 174 (202)
...++ .||+.+. ....+.+||.. +.+.+.+.. ..... .. ....++. -++++|+.+.. ...+.+||
T Consensus 93 ~spdg~~l~~~~~-~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~---~~~v~~~~ 168 (347)
T 3hfq_A 93 VDEARQLVYSANY-HKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG---SDKVYVYN 168 (347)
T ss_dssp EETTTTEEEEEET-TTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT---TTEEEEEE
T ss_pred ECCCCCEEEEEeC-CCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC---CCEEEEEE
Confidence 23344 4776652 45778888874 334444321 11000 00 1112222 36777776522 23688888
Q ss_pred CC
Q 028925 175 PN 176 (202)
Q Consensus 175 ~~ 176 (202)
.+
T Consensus 169 ~~ 170 (347)
T 3hfq_A 169 VS 170 (347)
T ss_dssp EC
T ss_pred EC
Confidence 87
No 50
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.86 E-value=0.074 Score=38.55 Aligned_cols=143 Identities=10% Similarity=0.083 Sum_probs=78.4
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++||+... + ..+.+||+.++............ -..++. -+|+||+.... ...+.+||..+...
T Consensus 77 ~g~l~v~~~-~------~~i~~~d~~~~~~~~~~~~~~~~-p~~i~~~~~g~l~v~~~~-------~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 77 AGTVYVTDF-N------NRVVTLAAGSNNQTVLPFDGLNY-PEGLAVDTQGAVYVADRG-------NNRVVKLAAGSKTQ 141 (270)
T ss_dssp TCCEEEEET-T------TEEEEECTTCSCCEECCCCSCSS-EEEEEECTTCCEEEEEGG-------GTEEEEECTTCCSC
T ss_pred CCCEEEEcC-C------CEEEEEeCCCceEeeeecCCcCC-CcceEECCCCCEEEEECC-------CCEEEEEECCCcee
Confidence 467777753 1 35888998876654443211111 112222 36789887432 23688888766554
Q ss_pred EeccCcc-ceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCCCCce
Q 028925 93 CQMKNGC-VMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEEPSYS 169 (202)
Q Consensus 93 ~~~~~~~-~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~ 169 (202)
....... ....+..+. +++||+... ....+.+||+++..-..... .. .....+++.. ++.||+.... ...
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~~i~~~~~~~~~~~~~~~--~~-~~~p~~i~~d~~g~l~v~~~~---~~~ 214 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGNVYVTDT-DNNRVVKLEAESNNQVVLPF--TD-ITAPWGIAVDEAGTVYVTEHN---TNQ 214 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCCEEEEEG-GGTEEEEECTTTCCEEECCC--SS-CCSEEEEEECTTCCEEEEETT---TSC
T ss_pred EeeccccCCCceeEEEeCCCCEEEEEC-CCCEEEEEecCCCceEeecc--cC-CCCceEEEECCCCCEEEEECC---CCc
Confidence 4332111 112222332 578998763 35689999998776544321 11 1222344443 5688887532 236
Q ss_pred eEEEeCCCC
Q 028925 170 TLLYDPNAA 178 (202)
Q Consensus 170 ~~~yd~~~~ 178 (202)
+.+||+.+.
T Consensus 215 v~~~~~~~~ 223 (270)
T 1rwi_B 215 VVKLLAGST 223 (270)
T ss_dssp EEEECTTCS
T ss_pred EEEEcCCCC
Confidence 888998765
No 51
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.86 E-value=0.08 Score=38.86 Aligned_cols=146 Identities=8% Similarity=0.058 Sum_probs=83.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++||+..... ..+.+||+. ++...... +.......... -++++|+.... ...+.+||+. .+
T Consensus 30 ~g~l~v~~~~~------~~v~~~~~~-~~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~-------~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 30 DGKVWFTQHKA------NKISSLDQS-GRIKEFEV-PTPDAKVMCLIVSSLGDIWFTENG-------ANKIGKLSKK-GG 93 (300)
T ss_dssp TSCEEEEETTT------TEEEEECTT-SCEEEEEC-SSTTCCEEEEEECTTSCEEEEETT-------TTEEEEECTT-SC
T ss_pred CCCEEEEcCCC------CeEEEECCC-CceEEEEC-CCCCCcceeEEECCCCCEEEEecC-------CCeEEEECCC-CC
Confidence 57899975321 358889988 77765432 21112222222 36789886431 2468999988 66
Q ss_pred EEecc-C-ccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCC
Q 028925 92 WCQMK-N-GCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPS 167 (202)
Q Consensus 92 W~~~~-~-~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~ 167 (202)
..... + .......... .++.+|+... ....+..||++ .+......+.. ......++. .+++||+... ..
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~~~~-g~~~~~~~~~~--~~~~~~i~~d~~g~l~v~~~---~~ 166 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGDIWFTQL-NGDRIGKLTAD-GTIYEYDLPNK--GSYPAFITLGSDNALWFTEN---QN 166 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTCEEEEET-TTTEEEEECTT-SCEEEEECSST--TCCEEEEEECTTSSEEEEET---TT
T ss_pred eEEecCCCCCCCCccceECCCCCEEEEcc-CCCeEEEECCC-CCEEEccCCCC--CCCceeEEECCCCCEEEEec---CC
Confidence 65543 2 1122223333 2678998753 35689999998 66665432211 122233333 3578888652 13
Q ss_pred ceeEEEeCCCCCCCcceee
Q 028925 168 YSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 168 ~~~~~yd~~~~~~~~W~~~ 186 (202)
..+++||+ ++ +...+
T Consensus 167 ~~i~~~~~-~g---~~~~~ 181 (300)
T 2qc5_A 167 NSIGRITN-TG---KLEEY 181 (300)
T ss_dssp TEEEEECT-TC---CEEEE
T ss_pred CeEEEECC-CC---cEEEe
Confidence 36888988 54 56554
No 52
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.85 E-value=0.026 Score=42.87 Aligned_cols=105 Identities=14% Similarity=0.248 Sum_probs=60.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--C--CEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--D--GKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++.++.|+.+ ..+.+||....++..+..+...........+ + +++++.|+.+ ..+.+||..+
T Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~ 88 (379)
T 3jrp_A 22 YGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVLIWKEEN 88 (379)
T ss_dssp SSSEEEEEETT------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SCEEEEEEET
T ss_pred CCCEEEEEECC------CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-------CEEEEEEcCC
Confidence 56666776653 3477788776666655444322222233333 2 6677666543 4588999988
Q ss_pred CeEEeccC---ccceeeeeEEE-C--CEEEEEeCCCCCeEEEEeCCCCc
Q 028925 90 HTWCQMKN---GCVMVTAHAVV-G--KKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 90 ~~W~~~~~---~~~~~~~~~~~-~--~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
.+|..+.. ........... + +.+++.++ ..+.+.+||..+..
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKENG 136 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCTTS
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCCCEEEEec-CCCcEEEEecCCCC
Confidence 88766551 11222222222 3 45566654 67889999987763
No 53
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.81 E-value=0.13 Score=40.51 Aligned_cols=151 Identities=12% Similarity=0.114 Sum_probs=79.0
Q ss_pred EECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 12 EVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 12 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
..++..++.|+.+ ..+.+||+.+.+-... +............++++++.|+.+ ..+.+||..+.+
T Consensus 286 ~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~ 350 (445)
T 2ovr_B 286 QFDGIHVVSGSLD------TSIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNAD-------STVKIWDIKTGQ 350 (445)
T ss_dssp EECSSEEEEEETT------SCEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEETT-------SCEEEEETTTCC
T ss_pred EECCCEEEEEeCC------CeEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCC-------CeEEEEECCCCc
Confidence 3466666666653 3578899887664322 111112222334456666666533 468899987665
Q ss_pred EEec-cC-c-cceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEec-cCCCCCCCCC-eeEEEE-CCeEEEEcccCC
Q 028925 92 WCQM-KN-G-CVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVP-VPLTGSSSIG-FRFGIL-DGKLLLFSLEEE 165 (202)
Q Consensus 92 W~~~-~~-~-~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~-~~~~~~-~~~i~v~gG~~~ 165 (202)
-... .. . ....-....+++..++.|+ ..+.+.+||..+.+....- .......... .+++.. ++.++++|+...
T Consensus 351 ~~~~~~~~~~~~~~v~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 351 CLQTLQGPNKHQSAVTCLQFNKNFVITSS-DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp EEEEECSTTSCSSCEEEEEECSSEEEEEE-TTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred EEEEEccCCCCCCCEEEEEECCCEEEEEe-CCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 3222 11 1 1111222344566666665 6789999999888754432 1111111111 222333 455666666543
Q ss_pred C-CceeEEEeCCCC
Q 028925 166 P-SYSTLLYDPNAA 178 (202)
Q Consensus 166 ~-~~~~~~yd~~~~ 178 (202)
. ...+++||.+.+
T Consensus 430 ~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 430 TEETKLLVLDFDVD 443 (445)
T ss_dssp SSCCEEEEEECCCC
T ss_pred CCccEEEEEECCCC
Confidence 2 347888887754
No 54
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.81 E-value=0.083 Score=41.02 Aligned_cols=150 Identities=12% Similarity=0.143 Sum_probs=76.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEE-cCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNL-IESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
++++++.|+.+ ..+.+||+.+.+-.. ......+.........+..+++.|+.. ....+.+||..+.+-
T Consensus 228 ~~~~l~s~~~d------~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs-----~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 228 DGLQLASGGND------NVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGT-----MDKQIHFWNAATGAR 296 (401)
T ss_dssp TSSEEEEEETT------SCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCT-----TTCEEEEEETTTCCE
T ss_pred CCCEEEEEeCC------CeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCC-----CCCEEEEEECCCCCE
Confidence 55666666543 357888988755322 221111111111111144677666421 134689999887653
Q ss_pred EeccCccceeeeeEE-ECC-EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCce
Q 028925 93 CQMKNGCVMVTAHAV-VGK-KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYS 169 (202)
Q Consensus 93 ~~~~~~~~~~~~~~~-~~~-~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~ 169 (202)
...-........... .++ .+++.+|...+.+.+||..+............. ..-..++. .+++.++.++.. ..
T Consensus 297 ~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~-~~v~~~~~s~dg~~l~s~~~d---g~ 372 (401)
T 4aez_A 297 VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHD-TRVLYSALSPDGRILSTAASD---EN 372 (401)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCS-SCCCEEEECTTSSEEEEECTT---SE
T ss_pred EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCC-CCEEEEEECCCCCEEEEEeCC---Cc
Confidence 332211111122222 244 445444557889999999887766653211111 11122222 367777776542 36
Q ss_pred eEEEeCCCC
Q 028925 170 TLLYDPNAA 178 (202)
Q Consensus 170 ~~~yd~~~~ 178 (202)
+.+||..++
T Consensus 373 i~iw~~~~~ 381 (401)
T 4aez_A 373 LKFWRVYDG 381 (401)
T ss_dssp EEEEECCC-
T ss_pred EEEEECCCC
Confidence 888888775
No 55
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.78 E-value=0.092 Score=38.47 Aligned_cols=146 Identities=10% Similarity=0.041 Sum_probs=82.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++||+....+ ..+.+||+. ++........ ......... -+|.+|+.... ...+.+||+. .+
T Consensus 25 ~g~l~v~~~~~------~~v~~~d~~-~~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 25 KGKVWITQHKA------NMISCINLD-GKITEYPLPT-PDAKVMCLTISSDGEVWFTENA-------ANKIGRITKK-GI 88 (299)
T ss_dssp TSCEEEEETTT------TEEEEECTT-CCEEEEECSS-TTCCEEEEEECTTSCEEEEETT-------TTEEEEECTT-SC
T ss_pred CCCEEEEecCC------CcEEEEcCC-CCeEEecCCc-ccCceeeEEECCCCCEEEeCCC-------CCeEEEECCC-Cc
Confidence 67899874321 358899998 7776553211 112222222 36788887432 2358889886 44
Q ss_pred EEecc-C-ccceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCCCC
Q 028925 92 WCQMK-N-GCVMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEEPS 167 (202)
Q Consensus 92 W~~~~-~-~~~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~ 167 (202)
..... + ......+.... ++.+|+... ....+.+||+ +.+......+.. ......++.. ++++|+... ..
T Consensus 89 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~d~-~g~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~---~~ 161 (299)
T 2z2n_A 89 IKEYTLPNPDSAPYGITEGPNGDIWFTEM-NGNRIGRITD-DGKIREYELPNK--GSYPSFITLGSDNALWFTEN---QN 161 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEET-TTTEEEEECT-TCCEEEEECSST--TCCEEEEEECTTSCEEEEET---TT
T ss_pred EEEEeCCCcCCCceeeEECCCCCEEEEec-CCceEEEECC-CCCEEEecCCCC--CCCCceEEEcCCCCEEEEeC---CC
Confidence 54443 2 11122233332 678998753 3578999999 666665542211 1222334443 678888652 22
Q ss_pred ceeEEEeCCCCCCCcceee
Q 028925 168 YSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 168 ~~~~~yd~~~~~~~~W~~~ 186 (202)
..+++||+ ++ +...+
T Consensus 162 ~~i~~~~~-~g---~~~~~ 176 (299)
T 2z2n_A 162 NAIGRITE-SG---DITEF 176 (299)
T ss_dssp TEEEEECT-TC---CEEEE
T ss_pred CEEEEEcC-CC---cEEEe
Confidence 36889998 65 66554
No 56
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.74 E-value=0.098 Score=38.33 Aligned_cols=146 Identities=8% Similarity=0.033 Sum_probs=81.2
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++||+..... ..+++||+. .+.+... ++..-.......+ +++||+.... ...+.+||+ +.+
T Consensus 67 ~g~l~v~~~~~------~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 67 DGEVWFTENAA------NKIGRITKK-GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMN-------GNRIGRITD-DGK 130 (299)
T ss_dssp TSCEEEEETTT------TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETT-------TTEEEEECT-TCC
T ss_pred CCCEEEeCCCC------CeEEEECCC-CcEEEEe-CCCcCCCceeeEECCCCCEEEEecC-------CceEEEECC-CCC
Confidence 56888875321 358889986 5555443 2211112222222 6789986432 246889998 665
Q ss_pred EEecc-Cc-cceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCCCC
Q 028925 92 WCQMK-NG-CVMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEEPS 167 (202)
Q Consensus 92 W~~~~-~~-~~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~ 167 (202)
..... +. .......... ++.+|+... ....+.+||+ +.+......+.. .....+++.. +++||+.... .
T Consensus 131 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~~~~i~~~~~-~g~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~~---~ 203 (299)
T 2z2n_A 131 IREYELPNKGSYPSFITLGSDNALWFTEN-QNNAIGRITE-SGDITEFKIPTP--ASGPVGITKGNDDALWFVEII---G 203 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEET-TTTEEEEECT-TCCEEEEECSST--TCCEEEEEECTTSSEEEEETT---T
T ss_pred EEEecCCCCCCCCceEEEcCCCCEEEEeC-CCCEEEEEcC-CCcEEEeeCCCC--CCcceeEEECCCCCEEEEccC---C
Confidence 55443 21 1122222232 678998753 4578999999 777766532211 1222334443 5788886521 3
Q ss_pred ceeEEEeCCCCCCCcceee
Q 028925 168 YSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 168 ~~~~~yd~~~~~~~~W~~~ 186 (202)
..+.+||+ ++ +....
T Consensus 204 ~~i~~~~~-~g---~~~~~ 218 (299)
T 2z2n_A 204 NKIGRITT-SG---EITEF 218 (299)
T ss_dssp TEEEEECT-TC---CEEEE
T ss_pred ceEEEECC-CC---cEEEE
Confidence 36889999 65 66554
No 57
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.74 E-value=0.12 Score=39.29 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=57.5
Q ss_pred ECCE-EEEEcCccCCCCCCcceEEEEeCCCCeEEeccC---cc---ceeeee-EEECC-EEEEEeCCCCCeEEEEeC--C
Q 028925 61 FDGK-LYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKN---GC---VMVTAH-AVVGK-KLFCMEWKNQRKLTIFDP--E 129 (202)
Q Consensus 61 ~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~~---~~~~~~-~~~~~-~iyv~Gg~~~~~~~~yd~--~ 129 (202)
-+|+ +|+.+.. ...+.+||..+.+...+.. .+ ...... ...++ .||+......+.+.+|+. .
T Consensus 220 pdg~~l~v~~~~-------~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~ 292 (361)
T 3scy_A 220 SDGKFAYLINEI-------GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDET 292 (361)
T ss_dssp TTSSEEEEEETT-------TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTT
T ss_pred CCCCEEEEEcCC-------CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCC
Confidence 3565 6665421 2468888887777655431 11 111122 22255 466665321466777765 4
Q ss_pred CCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCCCCCcceeec
Q 028925 130 DNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAASGSEWQTSK 187 (202)
Q Consensus 130 ~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~~ 187 (202)
+.+++.+...... .....++. -+++.+++++.......++.+|++++ +-+.+.
T Consensus 293 ~g~~~~~~~~~~g--~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g---~~~~~~ 346 (361)
T 3scy_A 293 NGTLTKVGYQLTG--IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATG---LLTDIK 346 (361)
T ss_dssp TCCEEEEEEEECS--SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTC---CEEECS
T ss_pred CCcEEEeeEecCC--CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCC---cEeecc
Confidence 6777766521111 11123333 35554444433333335666788887 666663
No 58
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.71 E-value=0.039 Score=41.35 Aligned_cols=141 Identities=10% Similarity=-0.009 Sum_probs=74.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeE-EECCE-EEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFAC-SFDGK-LYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~-~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
.+.+|+....+ ..+.+||+.+++....-..+.. ...++ .-+++ +|+.+.. ...++++|+.+.+
T Consensus 9 ~~~~~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~-------~~~i~~~d~~~~~ 73 (331)
T 3u4y_A 9 SNFGIVVEQHL------RRISFFSTDTLEILNQITLGYD--FVDTAITSDCSNVVVTSDF-------CQTLVQIETQLEP 73 (331)
T ss_dssp CCEEEEEEGGG------TEEEEEETTTCCEEEEEECCCC--EEEEEECSSSCEEEEEEST-------TCEEEEEECSSSS
T ss_pred CCEEEEEecCC------CeEEEEeCcccceeeeEEccCC--cceEEEcCCCCEEEEEeCC-------CCeEEEEECCCCc
Confidence 57888886542 4689999999888654333222 22222 23555 7766542 2479999998876
Q ss_pred E--EeccCccceee-eeEEECC-EEEEEeCCCCC--eEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CC-eEEEEccc
Q 028925 92 W--CQMKNGCVMVT-AHAVVGK-KLFCMEWKNQR--KLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DG-KLLLFSLE 163 (202)
Q Consensus 92 W--~~~~~~~~~~~-~~~~~~~-~iyv~Gg~~~~--~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~-~i~v~gG~ 163 (202)
. ..+........ .....++ .|| +...... .+.+||.++.+-...- +... ....++.. ++ .+|+.+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~---~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 74 PKVVAIQEGQSSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFISTI-PIPY---DAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp CEEEEEEECSSCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEEE-ECCT---TEEEEEECTTSSCEEEEEET
T ss_pred eeEEecccCCCCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEEE-ECCC---CccceEECCCCCEEEEEecC
Confidence 4 22222111112 1222344 466 4322223 8999999888765542 1111 11233332 44 47776543
Q ss_pred CCCCce-eEEEeCCC
Q 028925 164 EEPSYS-TLLYDPNA 177 (202)
Q Consensus 164 ~~~~~~-~~~yd~~~ 177 (202)
. .. +.+|+...
T Consensus 149 ~---~~~i~~~~~~~ 160 (331)
T 3u4y_A 149 S---ANTVRRFKIDA 160 (331)
T ss_dssp T---TTEEEEEEECT
T ss_pred C---CceEEEEEECC
Confidence 2 23 66666554
No 59
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.69 E-value=0.15 Score=39.54 Aligned_cols=151 Identities=11% Similarity=0.117 Sum_probs=76.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEE-----cCCCCCCceeeeeEEE--CC-EEEEEcCccCCCCCCcceEEEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNL-----IESLRRPRWGCFACSF--DG-KLYVMGGRSSFTIGNSKFVDVY 85 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-----~~~~~~~r~~~~~~~~--~~-~iy~~gG~~~~~~~~~~~~~~y 85 (202)
++++++.|+.+ ..+.+||..+++... +..+.........+.+ ++ .+++.|+.+ ..+.+|
T Consensus 93 ~~~~l~s~s~d------g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-------g~i~iw 159 (402)
T 2aq5_A 93 NDNVIASGSED------CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-------NVILVW 159 (402)
T ss_dssp CTTEEEEEETT------SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-------SCEEEE
T ss_pred CCCEEEEEeCC------CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-------CEEEEE
Confidence 45666666543 357788887764311 1111111111122222 33 466666543 458999
Q ss_pred eCCCCeEEecc---CccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEc
Q 028925 86 NPERHTWCQMK---NGCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFS 161 (202)
Q Consensus 86 d~~~~~W~~~~---~~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~g 161 (202)
|..+.+....- .......+... .++.+++.++ ..+.+.+||+.+.+-...-................++++++.|
T Consensus 160 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSC-RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp ETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEE-TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred ECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEe-cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 98887654322 11112222222 2566666654 5788999999887644331011111111222223467777776
Q ss_pred ccCCCCceeEEEeCCCC
Q 028925 162 LEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 162 G~~~~~~~~~~yd~~~~ 178 (202)
........+.+||..+.
T Consensus 239 ~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHL 255 (402)
T ss_dssp ECTTCCEEEEEEETTBC
T ss_pred ccCCCCceEEEEcCccc
Confidence 43233447888998764
No 60
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.68 E-value=0.092 Score=43.60 Aligned_cols=143 Identities=13% Similarity=0.011 Sum_probs=80.6
Q ss_pred eeeEEEeCC-CCC---eEEcCCCCCCceeeeeE-EECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCcccee---
Q 028925 31 SSAEVYDPD-TDK---WNLIESLRRPRWGCFAC-SFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMV--- 102 (202)
Q Consensus 31 ~~~~~yd~~-t~~---W~~~~~~~~~r~~~~~~-~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~--- 102 (202)
.+++++|+. +.+ .+.+..-.. ....... .-+|+||+.+..++ ...++++|+.+.++..+.+.....
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~-~~~~~~~~spdg~l~~~~~~~~-----~~~l~~~~~~~~~~~~l~~~~~~~~~p 290 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPE-EAIAQAEWAPDGSLIVATDRTG-----WWNLHRVDPATGAATQLCRREEEFAGP 290 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETT-BCEEEEEECTTSCEEEEECTTS-----SCEEEEECTTTCCEEESSCCSSBSSCC
T ss_pred cEEEEEEECCCCcccccEEeCCCCC-ceEcceEECCCCeEEEEECCCC-----CeEEEEEECCCCceeecccccccccCc
Confidence 579999998 563 333322111 1111222 23788776654331 347999999888888876321111
Q ss_pred ------eeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeE-EEECCeEEEEcccCCCCceeEEEe
Q 028925 103 ------TAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRF-GILDGKLLLFSLEEEPSYSTLLYD 174 (202)
Q Consensus 103 ------~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~~~i~v~gG~~~~~~~~~~yd 174 (202)
..... .++++++.+......++.+|.++...+.+..+ . .....+ ...++++++..+.......++.+|
T Consensus 291 ~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~--~--~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 291 LWTPGMRWFAPLANGLIAVVHGKGAAVLGILDPESGELVDAAGP--W--TEWAATLTVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp CCSTTCCSEEECTTSCEEEEEBSSSCEEEEEETTTTEEEECCSS--C--CEEEEEEEEETTEEEEEEEETTEEEEEEEEE
T ss_pred cccccCceEeEeCCCEEEEEEEcCccEEEEEECCCCcEEEecCC--C--CeEEEEEecCCCEEEEEEcCCCCCCEEEEEE
Confidence 12222 26677766543345677779888887776422 1 111223 345677776654433344788889
Q ss_pred CCCCCCCcceee
Q 028925 175 PNAASGSEWQTS 186 (202)
Q Consensus 175 ~~~~~~~~W~~~ 186 (202)
.+++ +.+.+
T Consensus 367 ~~~g---~~~~l 375 (662)
T 3azo_A 367 TVTG---RARTI 375 (662)
T ss_dssp TTTC---CEEEE
T ss_pred CCCC---ceEEe
Confidence 8877 66655
No 61
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.67 E-value=0.083 Score=41.50 Aligned_cols=143 Identities=12% Similarity=0.149 Sum_probs=76.7
Q ss_pred EECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 12 EVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 12 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
..++++++.|+.+ ..+.+||..+.+-... +...........+++..++.|+.+ ..+.+||..+.+
T Consensus 180 ~~~~~~l~sg~~d------g~i~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~s~s~d-------g~i~vwd~~~~~ 244 (435)
T 1p22_A 180 QYDERVIITGSSD------STVRVWDVNTGEMLNT--LIHHCEAVLHLRFNNGMMVTCSKD-------RSIAVWDMASPT 244 (435)
T ss_dssp ECCSSEEEEEETT------SCEEEEESSSCCEEEE--ECCCCSCEEEEECCTTEEEEEETT-------SCEEEEECSSSS
T ss_pred EECCCEEEEEcCC------CeEEEEECCCCcEEEE--EcCCCCcEEEEEEcCCEEEEeeCC-------CcEEEEeCCCCC
Confidence 3466777777654 3578889887764322 111122223334455666666543 468888887654
Q ss_pred EEe----ccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCC
Q 028925 92 WCQ----MKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPS 167 (202)
Q Consensus 92 W~~----~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~ 167 (202)
-.. .........+ ..+++..++.|+ ..+.+.+||..+.+-...-.. . ......+..++..++.|+..
T Consensus 245 ~~~~~~~~~~~~~~v~~-~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~--~--~~~v~~~~~~~~~l~~g~~d--- 315 (435)
T 1p22_A 245 DITLRRVLVGHRAAVNV-VDFDDKYIVSAS-GDRTIKVWNTSTCEFVRTLNG--H--KRGIACLQYRDRLVVSGSSD--- 315 (435)
T ss_dssp CCEEEEEECCCSSCEEE-EEEETTEEEEEE-TTSEEEEEETTTCCEEEEEEC--C--SSCEEEEEEETTEEEEEETT---
T ss_pred CceeeeEecCCCCcEEE-EEeCCCEEEEEe-CCCeEEEEECCcCcEEEEEcC--C--CCcEEEEEeCCCEEEEEeCC---
Confidence 221 1111111222 233555555554 578899999987754332111 1 22233344466677776542
Q ss_pred ceeEEEeCCCC
Q 028925 168 YSTLLYDPNAA 178 (202)
Q Consensus 168 ~~~~~yd~~~~ 178 (202)
..+.+||..++
T Consensus 316 g~i~iwd~~~~ 326 (435)
T 1p22_A 316 NTIRLWDIECG 326 (435)
T ss_dssp SCEEEEETTTC
T ss_pred CeEEEEECCCC
Confidence 26888888765
No 62
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.63 E-value=0.27 Score=41.92 Aligned_cols=145 Identities=11% Similarity=0.041 Sum_probs=85.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCC-----CCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLR-----RPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~-----~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
+++||+... .-+++||+.+++|+...... ..........-+|.||+... ...+.+||+.
T Consensus 460 ~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--------~~Gl~~~~~~ 523 (781)
T 3v9f_A 460 NKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF--------GGGVGIYTPD 523 (781)
T ss_dssp TSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES--------SSCEEEECTT
T ss_pred CCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc--------CCCEEEEeCC
Confidence 467777532 24889999999887654322 11212111223678887532 1248899999
Q ss_pred CCeEEeccCc---cce-eeeeEE-ECCEEEEEeCCCCCeE-EEEeCCCCcEEEeccC-CCCCCCCCeeEEE-ECCeEEEE
Q 028925 89 RHTWCQMKNG---CVM-VTAHAV-VGKKLFCMEWKNQRKL-TIFDPEDNSWKMVPVP-LTGSSSIGFRFGI-LDGKLLLF 160 (202)
Q Consensus 89 ~~~W~~~~~~---~~~-~~~~~~-~~~~iyv~Gg~~~~~~-~~yd~~~~~W~~~~~~-~~~~~~~~~~~~~-~~~~i~v~ 160 (202)
+++++..... +.. ..+... .++.|++.. . ..+ .+||+++++++..... ..+. ..-.+++. .+|+|++.
T Consensus 524 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T--~-~Glv~~~d~~~~~~~~~~~~~gl~~-~~i~~i~~d~~g~lW~~ 599 (781)
T 3v9f_A 524 MQLVRKFNQYEGFCSNTINQIYRSSKGQMWLAT--G-EGLVCFPSARNFDYQVFQRKEGLPN-THIRAISEDKNGNIWAS 599 (781)
T ss_dssp CCEEEEECTTTTCSCSCEEEEEECTTSCEEEEE--T-TEEEEESCTTTCCCEEECGGGTCSC-CCCCEEEECSSSCEEEE
T ss_pred CCeEEEccCCCCCCCCeeEEEEECCCCCEEEEE--C-CCceEEECCCCCcEEEccccCCCCC-ceEEEEEECCCCCEEEE
Confidence 9988877521 111 112222 257788763 2 566 9999999998877521 1111 12233333 36788876
Q ss_pred cccCCCCceeEEEeCCCCCCCcceee
Q 028925 161 SLEEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 161 gG~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
+. ..+.+||+++. +++..
T Consensus 600 t~-----~Gl~~~~~~~~---~~~~~ 617 (781)
T 3v9f_A 600 TN-----TGISCYITSKK---CFYTY 617 (781)
T ss_dssp CS-----SCEEEEETTTT---EEEEE
T ss_pred cC-----CceEEEECCCC---ceEEe
Confidence 41 24888999887 77665
No 63
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.62 E-value=0.045 Score=41.69 Aligned_cols=151 Identities=11% Similarity=0.159 Sum_probs=78.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCc-eeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPR-WGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r-~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
++++++.||.+ ..+.+||..+++|.....+.... .....+. -++++++.|+.+ ..+.+||..+.
T Consensus 27 ~g~~las~~~D------~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-------~~v~iw~~~~~ 93 (345)
T 3fm0_A 27 AGTLLASCGGD------RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-------ATTCIWKKNQD 93 (345)
T ss_dssp TSSCEEEEETT------SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-------SCEEEEEECCC
T ss_pred CCCEEEEEcCC------CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-------CcEEEEEccCC
Confidence 66777777754 34777888888775432221111 1122222 367777776643 35777877766
Q ss_pred eEEecc---CccceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCCc-EEEeccCCCCCCCCCee-EEE-ECCeEEEEccc
Q 028925 91 TWCQMK---NGCVMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDNS-WKMVPVPLTGSSSIGFR-FGI-LDGKLLLFSLE 163 (202)
Q Consensus 91 ~W~~~~---~~~~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~-~~~-~~~~i~v~gG~ 163 (202)
.+..+. .......+.. ..++++++.|+ ..+.+.+||..+.. +..+...... ..... ++. .++++++.|+.
T Consensus 94 ~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~s~s~ 170 (345)
T 3fm0_A 94 DFECVTTLEGHENEVKSVAWAPSGNLLATCS-RDKSVWVWEVDEEDEYECVSVLNSH--TQDVKHVVWHPSQELLASASY 170 (345)
T ss_dssp -EEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEECTTSCEEEEEEECCC--CSCEEEEEECSSSSCEEEEET
T ss_pred CeEEEEEccCCCCCceEEEEeCCCCEEEEEE-CCCeEEEEECCCCCCeEEEEEecCc--CCCeEEEEECCCCCEEEEEeC
Confidence 654433 1111122222 22566666664 56788899886543 3333211111 11122 222 25666666654
Q ss_pred CCCCceeEEEeCCCCCCCcceee
Q 028925 164 EEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 164 ~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
. ..+.+||..++ .|..+
T Consensus 171 d---~~i~~w~~~~~---~~~~~ 187 (345)
T 3fm0_A 171 D---DTVKLYREEED---DWVCC 187 (345)
T ss_dssp T---SCEEEEEEETT---EEEEE
T ss_pred C---CcEEEEEecCC---CEEEE
Confidence 3 25777887776 66543
No 64
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.60 E-value=0.17 Score=39.33 Aligned_cols=151 Identities=13% Similarity=0.060 Sum_probs=77.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCC-CcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIG-NSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~-~~~~~~~yd~~~~ 90 (202)
++.+|+.++.+ ..+.+||+.+.+....-+. ... .....+ +++.+++++....... ....+.+||+.+.
T Consensus 223 ~~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~--~~~-~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 223 RDLVYCSNWIS------EDISVIDRKTKLEIRKTDK--IGL-PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp TTEEEEEETTT------TEEEEEETTTTEEEEECCC--CSE-EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred CCEEEEEecCC------CcEEEEECCCCcEEEEecC--CCC-ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC
Confidence 34677776432 3688999987765433222 111 222222 5554445443221110 2357899999887
Q ss_pred eEEeccCccceeeeeE-EECC-EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCCCC
Q 028925 91 TWCQMKNGCVMVTAHA-VVGK-KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEEPS 167 (202)
Q Consensus 91 ~W~~~~~~~~~~~~~~-~~~~-~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~ 167 (202)
+-.............. ..++ .+|+.++ ..+.+.+||..+.+-...- + .. .....++.. +++.++++......
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~g~~l~~~~~-~~~~v~v~d~~~~~~~~~~-~-~~--~~~~~~~~s~dg~~l~~~~~~~~~ 368 (433)
T 3bws_A 294 KLIDTIGPPGNKRHIVSGNTENKIYVSDM-CCSKIEVYDLKEKKVQKSI-P-VF--DKPNTIALSPDGKYLYVSCRGPNH 368 (433)
T ss_dssp EEEEEEEEEECEEEEEECSSTTEEEEEET-TTTEEEEEETTTTEEEEEE-E-CS--SSEEEEEECTTSSEEEEEECCCCC
T ss_pred cEEeeccCCCCcceEEECCCCCEEEEEec-CCCEEEEEECCCCcEEEEe-c-CC--CCCCeEEEcCCCCEEEEEecCCCc
Confidence 6444321111111222 2244 6777764 5778999999876544332 1 11 112233332 45544444332221
Q ss_pred ------------ceeEEEeCCCC
Q 028925 168 ------------YSTLLYDPNAA 178 (202)
Q Consensus 168 ------------~~~~~yd~~~~ 178 (202)
..+++||.++.
T Consensus 369 ~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 369 PTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp TTTCTTSCCSSCCEEEEEETTTT
T ss_pred cccccccccccceEEEEEECCCC
Confidence 27999999876
No 65
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.58 E-value=0.27 Score=41.41 Aligned_cols=115 Identities=19% Similarity=0.276 Sum_probs=71.4
Q ss_pred eEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCCCC--------ceeeeeEEECCEEEEEcCccCCCCC
Q 028925 8 FACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLRRP--------RWGCFACSFDGKLYVMGGRSSFTIG 77 (202)
Q Consensus 8 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iy~~gG~~~~~~~ 77 (202)
.+-++.++.||+.... ..++.+|..|.+ |+.-...+.. ......+..+++||+...
T Consensus 71 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------- 136 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------- 136 (677)
T ss_dssp CCCEEETTEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT-------
T ss_pred eCCEEECCEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC-------
Confidence 3445679999998642 357888887765 7665432210 122344557888988642
Q ss_pred CcceEEEEeCCCC--eEEeccC-c----cceeeeeEEECCEEEEEeCC----CCCeEEEEeCCCCc--EEEec
Q 028925 78 NSKFVDVYNPERH--TWCQMKN-G----CVMVTAHAVVGKKLFCMEWK----NQRKLTIFDPEDNS--WKMVP 137 (202)
Q Consensus 78 ~~~~~~~yd~~~~--~W~~~~~-~----~~~~~~~~~~~~~iyv~Gg~----~~~~~~~yd~~~~~--W~~~~ 137 (202)
...+..+|..+. .|+.-.. . ........+.++.||+..+. ....+..||.++.+ |+.-.
T Consensus 137 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 137 -DGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp -TSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred -CCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 246889998766 4776432 1 11123345678888876431 24789999998776 88754
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.55 E-value=0.2 Score=39.45 Aligned_cols=144 Identities=15% Similarity=0.137 Sum_probs=77.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
++.+++.|+.+ ..+.+||+.+.+-...-..........+...+++.++.|+.+ ..+.+||..+.+-.
T Consensus 279 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d-------g~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 279 HGNIVVSGSYD------NTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD-------TTIRIWDLENGELM 345 (464)
T ss_dssp ETTEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT-------SCEEEEETTTTEEE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC-------CcEEEEECCCCcEE
Confidence 45555666543 358889987665432211111111122222356666666543 46899998877533
Q ss_pred eccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEE
Q 028925 94 QMKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLY 173 (202)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~y 173 (202)
..-...........+.+..++.|+ ..+.+.+||..+..-.... . ............++++++.|+. ..+.+|
T Consensus 346 ~~~~~h~~~v~~~~~~~~~l~s~s-~dg~v~vwd~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~d----g~i~iw 417 (464)
T 3v7d_B 346 YTLQGHTALVGLLRLSDKFLVSAA-ADGSIRGWDANDYSRKFSY-H--HTNLSAITTFYVSDNILVSGSE----NQFNIY 417 (464)
T ss_dssp EEECCCSSCEEEEEECSSEEEEEE-TTSEEEEEETTTCCEEEEE-E--CTTCCCEEEEEECSSEEEEEET----TEEEEE
T ss_pred EEEeCCCCcEEEEEEcCCEEEEEe-CCCcEEEEECCCCceeeee-c--CCCCccEEEEEeCCCEEEEecC----CeEEEE
Confidence 221111111222334455555554 5778999999876533322 1 1112233344567888777752 379999
Q ss_pred eCCCC
Q 028925 174 DPNAA 178 (202)
Q Consensus 174 d~~~~ 178 (202)
|.+++
T Consensus 418 d~~~g 422 (464)
T 3v7d_B 418 NLRSG 422 (464)
T ss_dssp ETTTC
T ss_pred ECCCC
Confidence 99886
No 67
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=96.50 E-value=0.17 Score=38.18 Aligned_cols=137 Identities=14% Similarity=0.104 Sum_probs=76.4
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCC--eEEecc--------Cc
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERH--TWCQMK--------NG 98 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~--~W~~~~--------~~ 98 (202)
..++++|+.+.+....... .....+.... -+|+||+.... ...+.+||+... .-..+. ..
T Consensus 69 ~~i~~~d~~~g~~~~~~~~-~~~~~p~gia~d~~g~l~v~d~~-------~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~ 140 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGK-NLFYLPHGLSIDTDGNYWVTDVA-------LHQVFKLDPHSKEGPLLILGRSMQPGSDQN 140 (329)
T ss_dssp CCEEEECTTTCCEEEEECT-TTCSSEEEEEECTTSCEEEEETT-------TTEEEEECTTCSSCCSEEESBTTBCCCSTT
T ss_pred CcEEEEECCCCeEEeccCC-CccCCceEEEECCCCCEEEEECC-------CCEEEEEeCCCCeEEEEEecccCCCCCCcc
Confidence 3689999988776433211 1111222222 37889987542 246899998654 222221 01
Q ss_pred cc-eeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCC------CCCCCCCeeEEEE-C-CeEEEEcccCCCC
Q 028925 99 CV-MVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPL------TGSSSIGFRFGIL-D-GKLLLFSLEEEPS 167 (202)
Q Consensus 99 ~~-~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~------~~~~~~~~~~~~~-~-~~i~v~gG~~~~~ 167 (202)
.. ...+.++. ++.||+..+.....+.+||++...-..+.... +.......++++. + +.||+.... .
T Consensus 141 ~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~---~ 217 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE---N 217 (329)
T ss_dssp CCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT---T
T ss_pred ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC---C
Confidence 11 12333333 68999997534678999997665544443111 1111223345543 4 899998632 3
Q ss_pred ceeEEEeCCCC
Q 028925 168 YSTLLYDPNAA 178 (202)
Q Consensus 168 ~~~~~yd~~~~ 178 (202)
..+.+||++++
T Consensus 218 ~~I~~~~~~~G 228 (329)
T 3fvz_A 218 GRIQCFKTDTK 228 (329)
T ss_dssp TEEEEEETTTC
T ss_pred CEEEEEECCCC
Confidence 47999999865
No 68
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.50 E-value=0.17 Score=38.00 Aligned_cols=145 Identities=11% Similarity=0.041 Sum_probs=75.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECC-EEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDG-KLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~-~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
++++|+.+... ...+++||+.+.+-...-+.........+..-++ .+|+... ...+.+||+.+.+-
T Consensus 152 g~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--------~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 152 TNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA--------DGELITIDTADNKI 218 (353)
T ss_dssp TTEEEEEEESS-----SCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT--------TSEEEEEETTTTEE
T ss_pred CCEEEEEecCC-----CceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC--------CCeEEEEECCCCeE
Confidence 45678776221 1458999998766433222111111112222344 4666532 24688999988764
Q ss_pred EeccCc----cc-eeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCC
Q 028925 93 CQMKNG----CV-MVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEE 165 (202)
Q Consensus 93 ~~~~~~----~~-~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~ 165 (202)
....+. +. ........ ++.+|+... ..+.+.+||+.+.+....-.. .. ....++...++.+|+....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~~~~~-~~--~~~~~~s~dg~~l~v~~~~-- 292 (353)
T 3vgz_A 219 LSRKKLLDDGKEHFFINISLDTARQRAFITDS-KAAEVLVVDTRNGNILAKVAA-PE--SLAVLFNPARNEAYVTHRQ-- 292 (353)
T ss_dssp EEEEECCCSSSCCCEEEEEEETTTTEEEEEES-SSSEEEEEETTTCCEEEEEEC-SS--CCCEEEETTTTEEEEEETT--
T ss_pred EEEEEcCCCCCCcccceEEECCCCCEEEEEeC-CCCEEEEEECCCCcEEEEEEc-CC--CceEEECCCCCEEEEEECC--
Confidence 332211 11 11222222 445777653 468899999988875543211 11 1122222224457776532
Q ss_pred CCceeEEEeCCCC
Q 028925 166 PSYSTLLYDPNAA 178 (202)
Q Consensus 166 ~~~~~~~yd~~~~ 178 (202)
...+.+||.++.
T Consensus 293 -~~~v~~~d~~~~ 304 (353)
T 3vgz_A 293 -AGKVSVIDAKSY 304 (353)
T ss_dssp -TTEEEEEETTTT
T ss_pred -CCeEEEEECCCC
Confidence 247899998876
No 69
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.45 E-value=0.17 Score=37.55 Aligned_cols=144 Identities=15% Similarity=0.128 Sum_probs=74.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++.++.|+.+ ..+.+||+.+.+......+........... -+++.++.|+.+ ..+.+||..+.+
T Consensus 108 ~~~~l~~~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~v~~~d~~~~~ 174 (337)
T 1gxr_A 108 DGCTLIVGGEA------STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-------GNIAVWDLHNQT 174 (337)
T ss_dssp TSSEEEEEESS------SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTE
T ss_pred CCCEEEEEcCC------CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-------CcEEEEeCCCCc
Confidence 45555555542 358888988877544332222211122222 256666666543 358899988776
Q ss_pred EEecc-CccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCc
Q 028925 92 WCQMK-NGCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSY 168 (202)
Q Consensus 92 W~~~~-~~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~ 168 (202)
....- ........... .++..++.++ ..+.+.+||..+.+-...-.. . ..-..++. .+++.+++++.. .
T Consensus 175 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~--~--~~v~~~~~s~~~~~l~~~~~~---~ 246 (337)
T 1gxr_A 175 LVRQFQGHTDGASCIDISNDGTKLWTGG-LDNTVRSWDLREGRQLQQHDF--T--SQIFSLGYCPTGEWLAVGMES---S 246 (337)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEEC--S--SCEEEEEECTTSSEEEEEETT---S
T ss_pred eeeeeecccCceEEEEECCCCCEEEEEe-cCCcEEEEECCCCceEeeecC--C--CceEEEEECCCCCEEEEEcCC---C
Confidence 44322 11112222222 2555555554 578899999987764433211 1 11122222 356677776532 2
Q ss_pred eeEEEeCCCC
Q 028925 169 STLLYDPNAA 178 (202)
Q Consensus 169 ~~~~yd~~~~ 178 (202)
.+.+||..+.
T Consensus 247 ~i~~~~~~~~ 256 (337)
T 1gxr_A 247 NVEVLHVNKP 256 (337)
T ss_dssp CEEEEETTSS
T ss_pred cEEEEECCCC
Confidence 5788888765
No 70
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.45 E-value=0.31 Score=41.13 Aligned_cols=118 Identities=16% Similarity=0.192 Sum_probs=71.0
Q ss_pred eeEEECCEEEEEcCccCCCCCCcceEEEEeCCCC--eEEeccCccc----------eeeeeEEECCEEEEEeCCCCCeEE
Q 028925 57 FACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH--TWCQMKNGCV----------MVTAHAVVGKKLFCMEWKNQRKLT 124 (202)
Q Consensus 57 ~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~----------~~~~~~~~~~~iyv~Gg~~~~~~~ 124 (202)
+-++.++.||+.+. ...++.+|..+. .|+.-..... ...+..+.+++||+.. ....+.
T Consensus 65 ~P~v~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~--~dg~l~ 134 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP--------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGV--LDGRLE 134 (689)
T ss_dssp CCEEETTEEEEECG--------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC--TTSEEE
T ss_pred cCEEECCEEEEEcC--------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEc--cCCEEE
Confidence 34567999998754 235888887765 4876442111 1123456788998864 467899
Q ss_pred EEeCCCCc--EEEecc-CCCCCCCCCeeEEEECCeEEEEcccC--CCCceeEEEeCCCCCCCccee
Q 028925 125 IFDPEDNS--WKMVPV-PLTGSSSIGFRFGILDGKLLLFSLEE--EPSYSTLLYDPNAASGSEWQT 185 (202)
Q Consensus 125 ~yd~~~~~--W~~~~~-~~~~~~~~~~~~~~~~~~i~v~gG~~--~~~~~~~~yd~~~~~~~~W~~ 185 (202)
.+|.++.+ |+.-.. ..........+-++.+++||+-.+.. .....++.||.+++.. .|+.
T Consensus 135 AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~~ 199 (689)
T 1yiq_A 135 AIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE-AWRF 199 (689)
T ss_dssp EEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE-EEEE
T ss_pred EEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcE-EEEe
Confidence 99998775 887642 11111122223346789988843221 1234799999988621 4765
No 71
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.45 E-value=0.17 Score=37.38 Aligned_cols=151 Identities=11% Similarity=0.025 Sum_probs=78.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCC----CceeeeeEEECCEEEEE----cCcc------CCCCCCc
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRR----PRWGCFACSFDGKLYVM----GGRS------SFTIGNS 79 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~----~r~~~~~~~~~~~iy~~----gG~~------~~~~~~~ 79 (202)
+++||+..... ..+.+||+.+++.+....... .+....+..-+|+||+. |... .......
T Consensus 79 dg~l~v~~~~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~ 152 (296)
T 3e5z_A 79 QGHLIACSHGL------RRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPG 152 (296)
T ss_dssp TCCEEEEETTT------TEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSS
T ss_pred CCcEEEEecCC------CeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCC
Confidence 57787764321 358999998888766532111 11122223347889986 3211 0000013
Q ss_pred ceEEEEeCCCCeEEeccCccceeeeeE-EECCEEEEEeCCCCCeEEEEeCC-CCcE-EEeccCCCCCCCCCeeEEE-ECC
Q 028925 80 KFVDVYNPERHTWCQMKNGCVMVTAHA-VVGKKLFCMEWKNQRKLTIFDPE-DNSW-KMVPVPLTGSSSIGFRFGI-LDG 155 (202)
Q Consensus 80 ~~~~~yd~~~~~W~~~~~~~~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~-~~~W-~~~~~~~~~~~~~~~~~~~-~~~ 155 (202)
..++.+|+. .+...+........+.+ ..++++++.+ .....+++||.. +.+. ......... .....+++. -+|
T Consensus 153 ~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~p~~i~~d~~G 229 (296)
T 3e5z_A 153 RWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLVSD-TGDNATHRYCLNARGETEYQGVHFTVE-PGKTDGLRVDAGG 229 (296)
T ss_dssp CEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEEEE-TTTTEEEEEEECSSSCEEEEEEEECCS-SSCCCSEEEBTTS
T ss_pred cEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEEEe-CCCCeEEEEEECCCCcCcCCCeEeeCC-CCCCCeEEECCCC
Confidence 478999987 55554432222222222 2356666544 356789999986 4555 221111011 111123333 367
Q ss_pred eEEEEcccCCCCceeEEEeCCCC
Q 028925 156 KLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 156 ~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+||+.. ...+.+||++..
T Consensus 230 ~l~v~~-----~~~v~~~~~~g~ 247 (296)
T 3e5z_A 230 LIWASA-----GDGVHVLTPDGD 247 (296)
T ss_dssp CEEEEE-----TTEEEEECTTSC
T ss_pred CEEEEc-----CCeEEEECCCCC
Confidence 888876 236899999864
No 72
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.44 E-value=0.36 Score=41.16 Aligned_cols=147 Identities=13% Similarity=0.061 Sum_probs=84.2
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCC--CCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESL--RRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~--~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++.||+.. . ..-+.+||+.+++++..... +..........-++.||+... ..+.+||+.+++
T Consensus 417 ~g~lWigt-~------~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~---------~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 417 EGNLWFGT-Y------LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH---------AGVFVIDLASKK 480 (781)
T ss_dssp TSCEEEEE-T------TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET---------TEEEEEESSSSS
T ss_pred CCCEEEEe-c------cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC---------CceEEEeCCCCe
Confidence 56677632 1 13588999999988877532 222222111112678887532 358999999988
Q ss_pred EEeccCcc------ceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEccc
Q 028925 92 WCQMKNGC------VMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLE 163 (202)
Q Consensus 92 W~~~~~~~------~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~ 163 (202)
|....... ....+.. -.++.|++.. ....+.+||+++++++............-.++.. .++.|++-..
T Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt--~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 481 VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT--FGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp CCEEECTTTSSCSCSCEEEEEECTTCCEEEEE--SSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-
T ss_pred EEecccCcccccccceeEEEEEcCCCCEEEEE--cCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-
Confidence 87664211 1111221 2267788753 2356899999999998875211111111122222 2577777431
Q ss_pred CCCCcee-EEEeCCCCCCCcceee
Q 028925 164 EEPSYST-LLYDPNAASGSEWQTS 186 (202)
Q Consensus 164 ~~~~~~~-~~yd~~~~~~~~W~~~ 186 (202)
..+ ..||++++ +++..
T Consensus 558 ----~Glv~~~d~~~~---~~~~~ 574 (781)
T 3v9f_A 558 ----EGLVCFPSARNF---DYQVF 574 (781)
T ss_dssp ----TEEEEESCTTTC---CCEEE
T ss_pred ----CCceEEECCCCC---cEEEc
Confidence 246 88999887 77765
No 73
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.39 E-value=0.24 Score=39.03 Aligned_cols=142 Identities=6% Similarity=0.011 Sum_probs=73.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
+++.++.|+.+ ..+.+||+.+.+-.. .+...........++++.++.|+.+ ..+.+||..+.+-.
T Consensus 321 ~~~~l~sg~~d------g~i~vwd~~~~~~~~--~~~~h~~~v~~~~~~~~~l~s~s~d-------g~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 321 ERKRCISASMD------TTIRIWDLENGELMY--TLQGHTALVGLLRLSDKFLVSAAAD-------GSIRGWDANDYSRK 385 (464)
T ss_dssp TTTEEEEEETT------SCEEEEETTTTEEEE--EECCCSSCEEEEEECSSEEEEEETT-------SEEEEEETTTCCEE
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEE--EEeCCCCcEEEEEEcCCEEEEEeCC-------CcEEEEECCCCcee
Confidence 44555555543 358888987765322 2222222233444567766666543 46889998875422
Q ss_pred eccC-ccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEE
Q 028925 94 QMKN-GCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLL 172 (202)
Q Consensus 94 ~~~~-~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~ 172 (202)
.... ...........++.+++.|+ .+.+.+||..+.+-.... . ......-..++..++.+++.++ .....-+++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g~~~~~~-~-~~~~~~v~~v~~~~~~l~~~~~-~~g~~~i~~ 460 (464)
T 3v7d_B 386 FSYHHTNLSAITTFYVSDNILVSGS--ENQFNIYNLRSGKLVHAN-I-LKDADQIWSVNFKGKTLVAAVE-KDGQSFLEI 460 (464)
T ss_dssp EEEECTTCCCEEEEEECSSEEEEEE--TTEEEEEETTTCCEEESC-T-TTTCSEEEEEEEETTEEEEEEE-ETTEEEEEE
T ss_pred eeecCCCCccEEEEEeCCCEEEEec--CCeEEEEECCCCcEEehh-h-ccCCCcEEEEEecCCEEEEEEE-eCCeEEEEE
Confidence 2211 11122223455777777765 578999999988755431 1 1111222233334444544443 332334555
Q ss_pred EeC
Q 028925 173 YDP 175 (202)
Q Consensus 173 yd~ 175 (202)
+|.
T Consensus 461 ldf 463 (464)
T 3v7d_B 461 LDF 463 (464)
T ss_dssp EEC
T ss_pred eec
Confidence 654
No 74
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.39 E-value=0.36 Score=40.58 Aligned_cols=114 Identities=16% Similarity=0.200 Sum_probs=70.2
Q ss_pred eEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCCCC--------ceeeeeEEECCEEEEEcCccCCCCC
Q 028925 8 FACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLRRP--------RWGCFACSFDGKLYVMGGRSSFTIG 77 (202)
Q Consensus 8 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iy~~gG~~~~~~~ 77 (202)
.+-++.++.||+.... ..++.+|..|.+ |+.-...+.. ......++.+++||+...
T Consensus 60 ~~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------- 125 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------- 125 (668)
T ss_dssp CCCEEETTEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT-------
T ss_pred cCCEEECCEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC-------
Confidence 3345679999998642 358888887765 7764332211 112234557888887642
Q ss_pred CcceEEEEeCCCC--eEEeccCcc----ceeeeeEEECCEEEEEeCC----CCCeEEEEeCCCCc--EEEe
Q 028925 78 NSKFVDVYNPERH--TWCQMKNGC----VMVTAHAVVGKKLFCMEWK----NQRKLTIFDPEDNS--WKMV 136 (202)
Q Consensus 78 ~~~~~~~yd~~~~--~W~~~~~~~----~~~~~~~~~~~~iyv~Gg~----~~~~~~~yd~~~~~--W~~~ 136 (202)
...+..+|..+. .|+.-.... ....+..+.++.||+..+. ....++.||.++.+ |+.-
T Consensus 126 -dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 126 -DGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp -TSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred -CCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 246899998776 487654211 1123345678888875321 24689999998776 8875
No 75
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.38 E-value=0.33 Score=40.02 Aligned_cols=116 Identities=10% Similarity=0.100 Sum_probs=71.5
Q ss_pred eEEEEECCEEEEEcCcCCCCCceeeeEEEeC-CCCC--eEEcCCCCCC--------ceeeeeEEECCEEEEEcCccCCCC
Q 028925 8 FACAEVNGKIYAVGGYGMDGESLSSAEVYDP-DTDK--WNLIESLRRP--------RWGCFACSFDGKLYVMGGRSSFTI 76 (202)
Q Consensus 8 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iy~~gG~~~~~~ 76 (202)
.+-++.++.||+....+ ..++.+|. .+.+ |+.-...... ......+..+++||+...
T Consensus 56 ~~P~v~~g~vyv~~~~~------~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------ 123 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAFP------NNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------ 123 (571)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------
T ss_pred cccEEECCEEEEEeCCC------CEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------
Confidence 34456799999986521 35888998 7665 8764332211 112234567899998643
Q ss_pred CCcceEEEEeCCCC--eEEeccCc-c---ceeeeeEEECCEEEEEeCC----CCCeEEEEeCCCCc--EEEec
Q 028925 77 GNSKFVDVYNPERH--TWCQMKNG-C---VMVTAHAVVGKKLFCMEWK----NQRKLTIFDPEDNS--WKMVP 137 (202)
Q Consensus 77 ~~~~~~~~yd~~~~--~W~~~~~~-~---~~~~~~~~~~~~iyv~Gg~----~~~~~~~yd~~~~~--W~~~~ 137 (202)
...++.+|..+. .|+.-... . ....+..+.++.||+.... ....+..||.++.+ |+.-.
T Consensus 124 --dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 124 --NGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp --TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred --CCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 246899998776 58754321 1 1122335678888875421 15789999998765 87653
No 76
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.38 E-value=0.35 Score=40.22 Aligned_cols=116 Identities=19% Similarity=0.176 Sum_probs=69.8
Q ss_pred eEEEEECCEEEEEcCcCCCCCceeeeEEEeC-CCCC--eEEcCCCCC-----C---ceeeeeEE--ECCE----EEEEcC
Q 028925 8 FACAEVNGKIYAVGGYGMDGESLSSAEVYDP-DTDK--WNLIESLRR-----P---RWGCFACS--FDGK----LYVMGG 70 (202)
Q Consensus 8 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~-~t~~--W~~~~~~~~-----~---r~~~~~~~--~~~~----iy~~gG 70 (202)
.+-++.++.||+....+ ..++.+|. .+.+ |+.-..... . ......++ .+++ ||+...
T Consensus 56 ~tP~v~~g~vyv~~~~~------~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~ 129 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSFP------NNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL 129 (599)
T ss_dssp SCCEEETTEEEEECSTT------TCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT
T ss_pred eccEEECCEEEEEeCCC------CEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC
Confidence 34456799999986521 35788888 6665 876543221 1 11123344 5777 887532
Q ss_pred ccCCCCCCcceEEEEeCCCCe--EEeccCcc----ceeeeeEEECCEEEEEeCC----CCCeEEEEeCCCCc--EEEec
Q 028925 71 RSSFTIGNSKFVDVYNPERHT--WCQMKNGC----VMVTAHAVVGKKLFCMEWK----NQRKLTIFDPEDNS--WKMVP 137 (202)
Q Consensus 71 ~~~~~~~~~~~~~~yd~~~~~--W~~~~~~~----~~~~~~~~~~~~iyv~Gg~----~~~~~~~yd~~~~~--W~~~~ 137 (202)
...+..+|..+.+ |+.-.... ....+..+.+++||+..+. ....+..||.++.+ |+.-.
T Consensus 130 --------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 --------DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp --------TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred --------CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 2468899987764 87543211 1123345678888864321 25789999998776 88754
No 77
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.37 E-value=0.11 Score=39.35 Aligned_cols=146 Identities=10% Similarity=0.154 Sum_probs=74.6
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--C--CEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--D--GKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
+++++.|+.+ ..+.+||..+++|..+..+...........+ + +.+++.|+.+ ..+.+||..+.
T Consensus 69 ~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~ 135 (379)
T 3jrp_A 69 GTILASCSYD------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKEN 135 (379)
T ss_dssp CSEEEEEETT------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SEEEEEECCTT
T ss_pred CCEEEEeccC------CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-------CcEEEEecCCC
Confidence 5666666543 3578889888887665444322222233333 3 5666666543 46888888765
Q ss_pred eEEe---ccCccceeeeeEEE--------------CCEEEEEeCCCCCeEEEEeCCCCc--EEEeccCCCCCCCCCeeEE
Q 028925 91 TWCQ---MKNGCVMVTAHAVV--------------GKKLFCMEWKNQRKLTIFDPEDNS--WKMVPVPLTGSSSIGFRFG 151 (202)
Q Consensus 91 ~W~~---~~~~~~~~~~~~~~--------------~~~iyv~Gg~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~ 151 (202)
.-.. +............. ++.+++.|+ ..+.+.+||..+.. +......... ...-.+++
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~h-~~~v~~~~ 213 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVA 213 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEE-TTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEE
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEe-CCCeEEEEEecCCCcceeeEEEEecc-cCcEeEEE
Confidence 3111 11111111222222 356666665 56788888875543 5444311111 11122233
Q ss_pred EE-C---CeEEEEcccCCCCceeEEEeCCCC
Q 028925 152 IL-D---GKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 152 ~~-~---~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.. + +++++.++... .+.+||..+.
T Consensus 214 ~sp~~~~~~~l~s~~~dg---~i~iwd~~~~ 241 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQDR---TCIIWTQDNE 241 (379)
T ss_dssp ECCCCSSSEEEEEEETTS---CEEEEEESST
T ss_pred ECCCCCCCCeEEEEeCCC---EEEEEeCCCC
Confidence 22 3 67777775432 4677777654
No 78
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=96.36 E-value=0.2 Score=37.27 Aligned_cols=152 Identities=9% Similarity=0.043 Sum_probs=76.5
Q ss_pred eeeEEEeCCCCCeEEcCCCC----CCceeeeeEEECCEEEEEcCccCCC----CCCcceEEEEeCCCCeEEeccCcccee
Q 028925 31 SSAEVYDPDTDKWNLIESLR----RPRWGCFACSFDGKLYVMGGRSSFT----IGNSKFVDVYNPERHTWCQMKNGCVMV 102 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~----~~r~~~~~~~~~~~iy~~gG~~~~~----~~~~~~~~~yd~~~~~W~~~~~~~~~~ 102 (202)
..+++||+.+++.+.+.... ..+.+..++.-+|+||+..-..... ......++++|+.. +...+.......
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p 151 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS 151 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE
T ss_pred CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc
Confidence 35889999998887664432 1222222233478888743211100 01235688888753 333332111111
Q ss_pred eeeEEE-CC-EEEEEeCCCCCeEEEEeC--CCCcEEEec--cCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeC
Q 028925 103 TAHAVV-GK-KLFCMEWKNQRKLTIFDP--EDNSWKMVP--VPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDP 175 (202)
Q Consensus 103 ~~~~~~-~~-~iyv~Gg~~~~~~~~yd~--~~~~W~~~~--~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~ 175 (202)
.+.+.. ++ .+|+... ..+.+++||. ++.+..... ...........+++. .+|+||+.... ...+.+||+
T Consensus 152 ngi~~spdg~~lyv~~~-~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~---~~~v~~~d~ 227 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDS-LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN---GGRVIRLDP 227 (297)
T ss_dssp EEEEECTTSCEEEEEEG-GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET---TTEEEEECT
T ss_pred cceEEcCCCCEEEEecC-CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC---CCEEEEEcC
Confidence 222222 34 6888863 4577888875 455443211 000100011223444 36789886522 236999999
Q ss_pred CCCCCCcceeecccC
Q 028925 176 NAASGSEWQTSKIKP 190 (202)
Q Consensus 176 ~~~~~~~W~~~~~~p 190 (202)
+++ +-...-.+|
T Consensus 228 ~tG---~~~~~i~~p 239 (297)
T 3g4e_A 228 VTG---KRLQTVKLP 239 (297)
T ss_dssp TTC---CEEEEEECS
T ss_pred CCc---eEEEEEECC
Confidence 976 554433333
No 79
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.36 E-value=0.2 Score=37.23 Aligned_cols=144 Identities=10% Similarity=0.044 Sum_probs=74.7
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
+++.++.|+.+ ..+.+||+.+.+....-.............-+++.++.++.+ ..+.+||..+.+-.
T Consensus 152 ~~~~l~~~~~d------g~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~ 218 (337)
T 1gxr_A 152 DSKVCFSCCSD------GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLD-------NTVRSWDLREGRQL 218 (337)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEE
T ss_pred CCCEEEEEeCC------CcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecC-------CcEEEEECCCCceE
Confidence 44555555432 357888888765433211111111111112266666666532 46899998877533
Q ss_pred eccCccceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeE
Q 028925 94 QMKNGCVMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTL 171 (202)
Q Consensus 94 ~~~~~~~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~ 171 (202)
............. ..++..+++++ ..+.+.+||..+..-..+.. .. ..-..+.. .++++++.++. ...+.
T Consensus 219 ~~~~~~~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~--~~--~~v~~~~~~~~~~~l~~~~~---dg~i~ 290 (337)
T 1gxr_A 219 QQHDFTSQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQLHL--HE--SCVLSLKFAYCGKWFVSTGK---DNLLN 290 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEECC--CS--SCEEEEEECTTSSEEEEEET---TSEEE
T ss_pred eeecCCCceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEEcC--Cc--cceeEEEECCCCCEEEEecC---CCcEE
Confidence 3222111122222 23566666664 56789999998776444321 11 11122222 25677776654 23688
Q ss_pred EEeCCCC
Q 028925 172 LYDPNAA 178 (202)
Q Consensus 172 ~yd~~~~ 178 (202)
+||.+++
T Consensus 291 ~~~~~~~ 297 (337)
T 1gxr_A 291 AWRTPYG 297 (337)
T ss_dssp EEETTTC
T ss_pred EEECCCC
Confidence 8888776
No 80
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.35 E-value=0.33 Score=40.81 Aligned_cols=118 Identities=15% Similarity=0.157 Sum_probs=70.6
Q ss_pred eeEEECCEEEEEcCccCCCCCCcceEEEEeCCCC--eEEeccCccc----------eeeeeEEECCEEEEEeCCCCCeEE
Q 028925 57 FACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH--TWCQMKNGCV----------MVTAHAVVGKKLFCMEWKNQRKLT 124 (202)
Q Consensus 57 ~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~----------~~~~~~~~~~~iyv~Gg~~~~~~~ 124 (202)
+-++.++.||+.+. ...++.+|..+. .|+.-...+. ...+..+.+++||+.. ....++
T Consensus 61 ~P~v~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~dg~l~ 130 (668)
T 1kv9_A 61 TPLFHDGVIYTSMS--------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGT--LDGRLI 130 (668)
T ss_dssp CCEEETTEEEEEEG--------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC--TTSEEE
T ss_pred CCEEECCEEEEECC--------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEc--CCCEEE
Confidence 34567999998754 235888887665 4776542111 0123456788898763 467899
Q ss_pred EEeCCCCc--EEEeccCCCCCCCCCeeEEEECCeEEEEcccC--CCCceeEEEeCCCCCCCccee
Q 028925 125 IFDPEDNS--WKMVPVPLTGSSSIGFRFGILDGKLLLFSLEE--EPSYSTLLYDPNAASGSEWQT 185 (202)
Q Consensus 125 ~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~--~~~~~~~~yd~~~~~~~~W~~ 185 (202)
.+|.++.+ |+.-.............-++.+++||+-.+.. .....++.||++++.. .|+.
T Consensus 131 alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~-~W~~ 194 (668)
T 1kv9_A 131 ALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKL-AWRF 194 (668)
T ss_dssp EEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE-EEEE
T ss_pred EEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcE-EEEe
Confidence 99988775 88754221111122223346788888743221 1234799999987621 4765
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.35 E-value=0.12 Score=40.13 Aligned_cols=133 Identities=14% Similarity=0.134 Sum_probs=70.0
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-CccceeeeeEE
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-NGCVMVTAHAV 107 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~ 107 (202)
..+.+||..+.+........... ....+. -++++++.|+.+ ..+.+||..+.+-...- ........ ..
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~-~v~~v~~s~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~v~~-~~ 183 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDEST-YVASVKWSHDGSFLSVGLGN-------GLVDIYDVESQTKLRTMAGHQARVGC-LS 183 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTC-CEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEEEEECCCSSCEEE-EE
T ss_pred CeEEEeeCCCCcEeEeeecCCCC-CEEEEEECCCCCEEEEECCC-------CeEEEEECcCCeEEEEecCCCCceEE-EE
Confidence 36899999988876554332111 112222 266777776543 36889998876533322 22222222 33
Q ss_pred ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 108 VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 108 ~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+++.+++.|+ ..+.+.+||.....-...... .. ...-.++... +++.++.|+.. ..+.+||..+.
T Consensus 184 ~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~-~~-~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~ 249 (401)
T 4aez_A 184 WNRHVLSSGS-RSGAIHHHDVRIANHQIGTLQ-GH-SSEVCGLAWRSDGLQLASGGND---NVVQIWDARSS 249 (401)
T ss_dssp EETTEEEEEE-TTSEEEEEETTSSSCEEEEEE-CC-SSCEEEEEECTTSSEEEEEETT---SCEEEEETTCS
T ss_pred ECCCEEEEEc-CCCCEEEEecccCcceeeEEc-CC-CCCeeEEEEcCCCCEEEEEeCC---CeEEEccCCCC
Confidence 3555666654 678999999874332221101 11 1111222222 66777777542 25778887764
No 82
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=96.35 E-value=0.2 Score=37.11 Aligned_cols=167 Identities=11% Similarity=0.056 Sum_probs=82.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC-eEEc-C-CCCCC--ceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK-WNLI-E-SLRRP--RWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~-~-~~~~~--r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
++++++....+ ...++.+|+.-+. |+.. . ....+ .........+|.+++.... ...+.+||+.
T Consensus 87 dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-------~~~v~~~d~~ 154 (276)
T 3no2_A 87 DGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA-------TSEVREIAPN 154 (276)
T ss_dssp TSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT-------TTEEEEECTT
T ss_pred CCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC-------CCEEEEECCC
Confidence 56666654321 1357788874332 3321 1 11111 1111222346776665431 3468999987
Q ss_pred CC-eEEeccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc--EEEeccCCCC-CCCCCeeEE-EECCeEEEEc--
Q 028925 89 RH-TWCQMKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNS--WKMVPVPLTG-SSSIGFRFG-ILDGKLLLFS-- 161 (202)
Q Consensus 89 ~~-~W~~~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~--W~~~~~~~~~-~~~~~~~~~-~~~~~i~v~g-- 161 (202)
-+ .|+.-.+. .........++.+++.+. ....+..+|+++.+ |+.-...... ......++. ..++.+|+..
T Consensus 155 G~~~w~~~~~~-~~~~~~~~~~g~~~v~~~-~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~ 232 (276)
T 3no2_A 155 GQLLNSVKLSG-TPFSSAFLDNGDCLVACG-DAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQ 232 (276)
T ss_dssp SCEEEEEECSS-CCCEEEECTTSCEEEECB-TTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEEC
T ss_pred CCEEEEEECCC-CccceeEcCCCCEEEEeC-CCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEecc
Confidence 33 36543321 122233445778888764 34579999999665 7765422111 111122333 3488999876
Q ss_pred ccCC-----CCceeEEEeCCCCCCCcceeecccCCceeee
Q 028925 162 LEEE-----PSYSTLLYDPNAASGSEWQTSKIKPSGLCLC 196 (202)
Q Consensus 162 G~~~-----~~~~~~~yd~~~~~~~~W~~~~~~p~~~~~~ 196 (202)
|... ....++.+|++.+ -.|+--......+.+.
T Consensus 233 g~~~~~~~~~~~~~~~~~~~g~--~~W~~~~~~~~~~~~~ 270 (276)
T 3no2_A 233 GHDREAGKGKHPQLVEIDSEGK--VVWQLNDKVKFGMIST 270 (276)
T ss_dssp TTCTTGGGSCCCSEEEECTTSB--EEEEECCTTTSCCCCE
T ss_pred CccccccccCCceEEEECCCCC--EEEEecCcccccceee
Confidence 4322 1224555555432 2466544333344433
No 83
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.33 E-value=0.0068 Score=46.51 Aligned_cols=147 Identities=12% Similarity=0.119 Sum_probs=71.7
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++++++.|+.+ ..+.+||+.++.|+.+..+...........+ ++++++.|+.+ ..+.+||..+.+
T Consensus 22 ~g~~l~~~~~d------~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-------~~v~vwd~~~~~ 88 (377)
T 3dwl_C 22 QRTEFVTTTAT------NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-------RNAYVYEKRPDG 88 (377)
T ss_dssp SSSEEECCCSS------SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-------SSEEEC------
T ss_pred CCCEEEEecCC------CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-------CeEEEEEcCCCC
Confidence 56777777653 3477788888888777665443333333333 56666666543 458889888766
Q ss_pred -EEecc---CccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCc-EEEeccCCCCCCCCCeeEEEE-CCeEEEEcccC
Q 028925 92 -WCQMK---NGCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNS-WKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEE 164 (202)
Q Consensus 92 -W~~~~---~~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~ 164 (202)
|.... ........... .++.+++.|+ ..+.+.+||..+.+ |........+....-.+++.. ++++++.|+..
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 43322 11111122222 2555555554 56788899987765 333221111111222223322 56777777543
Q ss_pred CCCceeEEEeCCC
Q 028925 165 EPSYSTLLYDPNA 177 (202)
Q Consensus 165 ~~~~~~~~yd~~~ 177 (202)
..+.+||..+
T Consensus 168 ---~~i~iwd~~~ 177 (377)
T 3dwl_C 168 ---RKAYVLSAYV 177 (377)
T ss_dssp ---SCEEEEEECC
T ss_pred ---CEEEEEEEEe
Confidence 2577788753
No 84
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.33 E-value=0.22 Score=37.49 Aligned_cols=133 Identities=13% Similarity=0.164 Sum_probs=67.1
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEec-cCccceeeee-EEEC
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQM-KNGCVMVTAH-AVVG 109 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~~~-~~~~ 109 (202)
.+.+||..+.+-...-..........+..-+++.++.|+.+ ..+.+||..+.+-... ........+. ...+
T Consensus 145 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~d-------g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 217 (321)
T 3ow8_A 145 KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID-------GIINIFDIATGKLLHTLEGHAMPIRSLTFSPD 217 (321)
T ss_dssp EEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCCCEEEECTT
T ss_pred cEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCC-------CeEEEEECCCCcEEEEEcccCCceeEEEEcCC
Confidence 46777776654322111111111111112367777776543 4588999887753322 2111111122 2236
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 110 KKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 110 ~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+.+++.|+ ..+.+.+||..+......- ......-..++.. +++.++.++.. ..+.+||..+.
T Consensus 218 ~~~l~s~s-~dg~i~iwd~~~~~~~~~~---~~h~~~v~~~~~sp~~~~l~s~s~D---~~v~iwd~~~~ 280 (321)
T 3ow8_A 218 SQLLVTAS-DDGYIKIYDVQHANLAGTL---SGHASWVLNVAFCPDDTHFVSSSSD---KSVKVWDVGTR 280 (321)
T ss_dssp SCEEEEEC-TTSCEEEEETTTCCEEEEE---CCCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTT
T ss_pred CCEEEEEc-CCCeEEEEECCCcceeEEE---cCCCCceEEEEECCCCCEEEEEeCC---CcEEEEeCCCC
Confidence 66666665 5778999999876644321 1111111222222 56777776542 25788888764
No 85
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.33 E-value=0.13 Score=38.36 Aligned_cols=136 Identities=12% Similarity=0.105 Sum_probs=64.8
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEEECCE
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAVVGKK 111 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~ 111 (202)
.+.+||+.+.+....-.-........+..-++++++.|+.+ ..+.+||..+.+-.................+.
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D-------g~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~ 268 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD-------GQAMLWDLNEGKHLYTLDGGDIINALCFSPNR 268 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------CEEEEEETTTTEEEEEEECSSCEEEEEECSSS
T ss_pred EEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC-------CeEEEEEeccCceeeeecCCceEEeeecCCCC
Confidence 46778887665432211111111111112367777776643 46888998776533222211122222233333
Q ss_pred EEEEeCCCCCeEEEEeCCCCcEEEe-ccCC-----CCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 112 LFCMEWKNQRKLTIFDPEDNSWKMV-PVPL-----TGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 112 iyv~Gg~~~~~~~~yd~~~~~W~~~-~~~~-----~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.++.++ ..+.+.+||.++..-... ..+. ......-.+++. .+++.++.|+.. ..+.+||.+++
T Consensus 269 ~~~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D---g~v~iW~~~tG 338 (340)
T 4aow_A 269 YWLCAA-TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD---NLVRVWQVTIG 338 (340)
T ss_dssp SEEEEE-ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT---SCEEEEEEEC-
T ss_pred ceeecc-CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC---CEEEEEeCCCc
Confidence 334443 467888999877653322 1110 010111112222 267777777643 26888988775
No 86
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.26 E-value=0.23 Score=36.88 Aligned_cols=145 Identities=16% Similarity=0.114 Sum_probs=74.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
+++.++.|+.+ ..+.+||..+.+....-..........+..-++++++.|+.+ ..+.+||..+.+-.
T Consensus 34 ~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 34 NGEWLASSSAD------KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD-------KTLKIWDVSSGKCL 100 (312)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTCCEE
T ss_pred CCCEEEEeeCC------CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC-------CEEEEEECCCCcEE
Confidence 45666666643 347788888777654321111111111112366777776643 46889998876532
Q ss_pred ec-cCccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCcee
Q 028925 94 QM-KNGCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYST 170 (202)
Q Consensus 94 ~~-~~~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~ 170 (202)
.. .......... ...++.+++.|+ ..+.+.+||..+.+-...- . .. ...-..+.. .++++++.++.. ..+
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~-~-~~-~~~v~~~~~~~~~~~l~~~~~d---~~i 173 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVKTGKCLKTL-P-AH-SDPVSAVHFNRDGSLIVSSSYD---GLC 173 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEE-TTSCEEEEETTTCCEEEEE-C-CC-SSCEEEEEECTTSSEEEEEETT---SCE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCEEEEEe-c-CC-CCcEEEEEEcCCCCEEEEEeCC---CcE
Confidence 21 1111111111 222455666654 5678999999877643321 1 11 111112222 256777777542 257
Q ss_pred EEEeCCCC
Q 028925 171 LLYDPNAA 178 (202)
Q Consensus 171 ~~yd~~~~ 178 (202)
.+||..+.
T Consensus 174 ~~wd~~~~ 181 (312)
T 4ery_A 174 RIWDTASG 181 (312)
T ss_dssp EEEETTTC
T ss_pred EEEECCCC
Confidence 88888765
No 87
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.21 E-value=0.23 Score=38.41 Aligned_cols=144 Identities=18% Similarity=0.112 Sum_probs=73.0
Q ss_pred EEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 16 KIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 16 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
++++.|+.+ ..+.+||+.+.+....-.............+ ++++++.|+.+ ..+.+||+.+.+-.
T Consensus 145 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 145 NVLLSAGCD------NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-------KRVRVIEPRKGTVV 211 (402)
T ss_dssp TEEEEEETT------SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-------SEEEEEETTTTEEE
T ss_pred CEEEEEcCC------CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-------CcEEEEeCCCCcee
Confidence 466666543 3578889887765432110111111122222 66666666543 46899999877643
Q ss_pred ecc--Cccc--eeeeeEEECCEEEEEeC--CCCCeEEEEeCCCCcE--EEeccCCCCCCCCCeeEEEE-CC-eEEEEccc
Q 028925 94 QMK--NGCV--MVTAHAVVGKKLFCMEW--KNQRKLTIFDPEDNSW--KMVPVPLTGSSSIGFRFGIL-DG-KLLLFSLE 163 (202)
Q Consensus 94 ~~~--~~~~--~~~~~~~~~~~iyv~Gg--~~~~~~~~yd~~~~~W--~~~~~~~~~~~~~~~~~~~~-~~-~i~v~gG~ 163 (202)
..- .... ........++.+++.|. ...+.+.+||..+..- .... .... ..-..++.. ++ .+++.|+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~--~~v~~~~~s~~~~~l~~~g~~ 288 (402)
T 2aq5_A 212 AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQE-LDTS--SGVLLPFFDPDTNIVYLCGKG 288 (402)
T ss_dssp EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEE-CCCC--SSCEEEEEETTTTEEEEEETT
T ss_pred eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEe-ccCC--CceeEEEEcCCCCEEEEEEcC
Confidence 321 1111 11222334677777762 3577899999876542 1111 1111 112222322 44 45555532
Q ss_pred CCCCceeEEEeCCCC
Q 028925 164 EEPSYSTLLYDPNAA 178 (202)
Q Consensus 164 ~~~~~~~~~yd~~~~ 178 (202)
...+.+||..++
T Consensus 289 ---dg~i~i~d~~~~ 300 (402)
T 2aq5_A 289 ---DSSIRYFEITSE 300 (402)
T ss_dssp ---CSCEEEEEECSS
T ss_pred ---CCeEEEEEecCC
Confidence 225788888776
No 88
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.20 E-value=0.28 Score=37.45 Aligned_cols=148 Identities=11% Similarity=-0.052 Sum_probs=75.9
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEEE
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAVV 108 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~ 108 (202)
..++++|+.+.+++.+.. ..+........ -+|+.+++....... ....++++|..+.+...+...+... .....
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~ 291 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQ--TDRVIYKANPETLENEEVMVMPPCS-HLMSN 291 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEEEETTT--CCEEEEEECTTTCCEEEEEECCSEE-EEEEC
T ss_pred ceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEecCCCC--ccceEEEEECCCCCeEEeeeCCCCC-CCccC
Confidence 478999998888777654 22121222222 356533333222111 1245999999888766655322222 22334
Q ss_pred -CCEEEEEeCC---------------CCCeEEEEeCCCCcEEEeccCCCCC---------CCCCeeEEEECCeEEEEccc
Q 028925 109 -GKKLFCMEWK---------------NQRKLTIFDPEDNSWKMVPVPLTGS---------SSIGFRFGILDGKLLLFSLE 163 (202)
Q Consensus 109 -~~~iyv~Gg~---------------~~~~~~~yd~~~~~W~~~~~~~~~~---------~~~~~~~~~~~~~i~v~gG~ 163 (202)
+++++++.+. ....++.+|+++.+.+.+....... ...... ...+++.+++...
T Consensus 292 ~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 292 FDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPS-FTPNDDGVLFTSD 370 (396)
T ss_dssp SSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCE-ECTTSSEEEEEEC
T ss_pred CCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCce-EccCCCeEEEEec
Confidence 6766665421 2367999999888776664221100 011111 1235544444333
Q ss_pred CCCCceeEEEeCCCCCCCcceee
Q 028925 164 EEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 164 ~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
......++.+|..++ .++.+
T Consensus 371 ~~~~~~l~~~~~~~~---~~~~~ 390 (396)
T 3c5m_A 371 FEGVPAIYIADVPES---YKHLE 390 (396)
T ss_dssp TTSSCEEEEEECCTT---CC---
T ss_pred CCCCceEEEEEEccc---ccccc
Confidence 333347888888876 55543
No 89
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.14 E-value=0.24 Score=36.08 Aligned_cols=146 Identities=10% Similarity=0.067 Sum_probs=80.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE-CCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF-DGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++||+.-.. ...+.++|+....-+.+.+.....-...++.- +++||+..... ....++++++....-
T Consensus 90 ~~~lyv~d~~------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~dg~~~ 158 (267)
T 1npe_A 90 GRTIFWTDSQ------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR-----DNPKIETSHMDGTNR 158 (267)
T ss_dssp TTEEEEEETT------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS-----SSCEEEEEETTSCCC
T ss_pred CCeEEEEECC------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC-----CCcEEEEEecCCCCc
Confidence 5788887432 14678888865443333211111112222222 68899875321 124688888754432
Q ss_pred EeccCcc-ceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCce
Q 028925 93 CQMKNGC-VMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYS 169 (202)
Q Consensus 93 ~~~~~~~-~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~ 169 (202)
+.+.... ....+.++. ++.||+... ..+.+.++|++...-..+... .....+++..++.||+.... ...
T Consensus 159 ~~~~~~~~~~P~gia~d~~~~~lyv~d~-~~~~I~~~~~~g~~~~~~~~~----~~~P~gi~~d~~~lyva~~~---~~~ 230 (267)
T 1npe_A 159 RILAQDNLGLPNGLTFDAFSSQLCWVDA-GTHRAECLNPAQPGRRKVLEG----LQYPFAVTSYGKNLYYTDWK---TNS 230 (267)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTEEEEEEEEEC----CCSEEEEEEETTEEEEEETT---TTE
T ss_pred EEEEECCCCCCcEEEEcCCCCEEEEEEC-CCCEEEEEecCCCceEEEecC----CCCceEEEEeCCEEEEEECC---CCe
Confidence 2222111 122333332 578999874 467899999976543333211 12234566778999997532 347
Q ss_pred eEEEeCCCC
Q 028925 170 TLLYDPNAA 178 (202)
Q Consensus 170 ~~~yd~~~~ 178 (202)
+.++|++++
T Consensus 231 v~~~d~~~g 239 (267)
T 1npe_A 231 VIAMDLAIS 239 (267)
T ss_dssp EEEEETTTT
T ss_pred EEEEeCCCC
Confidence 999999876
No 90
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.10 E-value=0.24 Score=35.79 Aligned_cols=145 Identities=9% Similarity=-0.054 Sum_probs=73.6
Q ss_pred eeEEEeCCC-CCeEEcCCCCC-CceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEEEC
Q 028925 32 SAEVYDPDT-DKWNLIESLRR-PRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAVVG 109 (202)
Q Consensus 32 ~~~~yd~~t-~~W~~~~~~~~-~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~ 109 (202)
.+++||+.+ .+...+..... .........-+++.+++++.... ....++.+|..+.+-..+.............+
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spd 139 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF---GKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPD 139 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT---SSCEEEEEETTCCCCEECCSSSSEEEEEECTT
T ss_pred eEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC---CcceEEEEECCCCceEEeecCCCccceEECCC
Confidence 689999988 77766643322 22122222336666666543211 24578889887776555553222111122224
Q ss_pred CE-EEEEeC-CCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCCCCCcceee
Q 028925 110 KK-LFCMEW-KNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 110 ~~-iyv~Gg-~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
++ |++.+. .....++.+|..+.....+... . ..-..+.. .+++.+++.+.......++.++...+ ..+.+
T Consensus 140 g~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~---~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~---~~~~~ 212 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG-E---GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS---SVERI 212 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTCCEEECCCS-S---SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS---CEEEC
T ss_pred CCEEEEEECCCCceEEEEEECCCCcceEcccC-C---CccccceECCCCCEEEEEecCCCCccEEEECCCCC---CcEEE
Confidence 44 443432 1223566667777776655421 1 11122222 25665554443333457788887665 55554
No 91
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.08 E-value=0.4 Score=40.71 Aligned_cols=138 Identities=12% Similarity=-0.015 Sum_probs=75.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCC-ceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRP-RWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
++.||+++|.. .-+.+||+.+++++....-... .....+.. -+|.||+.+. ..+.+|||.++
T Consensus 482 ~g~lWi~~~t~------~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~---------~Gl~~~~~~~~ 546 (758)
T 3ott_A 482 EGNVWVLLYNN------KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFH---------GGVMRINPKDE 546 (758)
T ss_dssp TSCEEEEETTC------SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEET---------TEEEEECC--C
T ss_pred CCCEEEEccCC------CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEec---------CceEEEecCCC
Confidence 57899865542 2488999999988876421111 11112222 3678997431 24889999988
Q ss_pred eEEeccC--cc-ceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCC
Q 028925 91 TWCQMKN--GC-VMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEP 166 (202)
Q Consensus 91 ~W~~~~~--~~-~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~ 166 (202)
+++.... .+ ....+....++.|++.. ...+.+||+++.+.+....+. . ....++.. .+|+||+-| ..
T Consensus 547 ~~~~~~~~gl~~~~i~~i~~~~g~lWi~t---~~Gl~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~G~l~fG~-~~-- 617 (758)
T 3ott_A 547 SQQSISFGSFSNNEILSMTCVKNSIWVST---TNGLWIIDRKTMDARQQNMTN-K--RFTSLLFDPKEDCVYLGG-AD-- 617 (758)
T ss_dssp CCCBCCCCC---CCEEEEEEETTEEEEEE---SSCEEEEETTTCCEEEC--CC-C--CCSEEEEETTTTEEEEEC-BS--
T ss_pred ceEEecccCCCccceEEEEECCCCEEEEC---CCCeEEEcCCCceeEEecCCC-C--ceeeeEEECCCCcEEEec-CC--
Confidence 8766531 11 11223333478888763 567999999999887654221 1 11222222 256766633 21
Q ss_pred CceeEEEeCCC
Q 028925 167 SYSTLLYDPNA 177 (202)
Q Consensus 167 ~~~~~~yd~~~ 177 (202)
.+..++|+.
T Consensus 618 --Gl~~f~p~~ 626 (758)
T 3ott_A 618 --GFGISHSNL 626 (758)
T ss_dssp --EEEEEEC--
T ss_pred --ceEEEChhh
Confidence 355666653
No 92
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.06 E-value=0.32 Score=36.78 Aligned_cols=132 Identities=15% Similarity=0.180 Sum_probs=68.0
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEec-cCccceeeeeE-E
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQM-KNGCVMVTAHA-V 107 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~~~~-~ 107 (202)
.+.+||+.+.+-... +........... -++++++.|+.+ ..+.+||..+.+-... ........+.. .
T Consensus 165 ~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d-------~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~ 235 (340)
T 1got_B 165 TCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD-------ASAKLWDVREGMCRQTFTGHESDINAICFF 235 (340)
T ss_dssp CEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCSEEEEECCCSSCEEEEEEC
T ss_pred cEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC-------CcEEEEECCCCeeEEEEcCCcCCEEEEEEc
Confidence 577889887654322 111111112222 266777776643 4688899877643221 11111122222 2
Q ss_pred ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE--ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 108 VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI--LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 108 ~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.++..++.|+ ..+.+.+||..+.+-...- . ..........+. .++++++.|+.. ..+.+||..+.
T Consensus 236 p~~~~l~s~s-~d~~v~iwd~~~~~~~~~~-~-~~~~~~~v~~~~~s~~g~~l~~g~~d---~~i~vwd~~~~ 302 (340)
T 1got_B 236 PNGNAFATGS-DDATCRLFDLRADQELMTY-S-HDNIICGITSVSFSKSGRLLLAGYDD---FNCNVWDALKA 302 (340)
T ss_dssp TTSSEEEEEE-TTSCEEEEETTTTEEEEEE-C-CTTCCSCEEEEEECTTSSEEEEEETT---SEEEEEETTTC
T ss_pred CCCCEEEEEc-CCCcEEEEECCCCcEEEEE-c-cCCcccceEEEEECCCCCEEEEECCC---CeEEEEEcccC
Confidence 3566666665 6778999998876533221 1 111112222222 267777777542 36888887654
No 93
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.04 E-value=0.3 Score=36.36 Aligned_cols=147 Identities=7% Similarity=0.028 Sum_probs=71.5
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCe-E-EcCCCCCCceeeeeEEECCE-EEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKW-N-LIESLRRPRWGCFACSFDGK-LYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~-~~~~~~~~r~~~~~~~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+.||+.+..+ ..+++||+.+++- . .......++.. .+..-+++ || .+...+ ....+.+||+.+.+
T Consensus 52 ~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~s~dg~~l~-~~~~~~----~~~~i~v~d~~~~~ 119 (331)
T 3u4y_A 52 SNVVVTSDFC------QTLVQIETQLEPPKVVAIQEGQSSMAD-VDITPDDQFAV-TVTGLN----HPFNMQSYSFLKNK 119 (331)
T ss_dssp CEEEEEESTT------CEEEEEECSSSSCEEEEEEECSSCCCC-EEECTTSSEEE-ECCCSS----SSCEEEEEETTTTE
T ss_pred CEEEEEeCCC------CeEEEEECCCCceeEEecccCCCCccc-eEECCCCCEEE-EecCCC----CcccEEEEECCCCC
Confidence 3577776432 3689999988874 2 22222222211 12223444 55 432211 12279999998887
Q ss_pred EEeccCccceeeee-EEECC-EEEEEeCCCCCe-EEEEeCCCCc-EEEe-ccCCCCCCCCCeeEEEE-CCe-EEEEcccC
Q 028925 92 WCQMKNGCVMVTAH-AVVGK-KLFCMEWKNQRK-LTIFDPEDNS-WKMV-PVPLTGSSSIGFRFGIL-DGK-LLLFSLEE 164 (202)
Q Consensus 92 W~~~~~~~~~~~~~-~~~~~-~iyv~Gg~~~~~-~~~yd~~~~~-W~~~-~~~~~~~~~~~~~~~~~-~~~-i~v~gG~~ 164 (202)
-...-+........ ...++ .+|+.+. .... +.+|+...+. .... ...... ......++.. +++ +|+.+..
T Consensus 120 ~~~~~~~~~~~~~~~~spdg~~l~~~~~-~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~- 196 (331)
T 3u4y_A 120 FISTIPIPYDAVGIAISPNGNGLILIDR-SSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLI- 196 (331)
T ss_dssp EEEEEECCTTEEEEEECTTSSCEEEEEE-TTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETT-
T ss_pred eEEEEECCCCccceEECCCCCEEEEEec-CCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCC-
Confidence 54433222222222 22345 4887764 3344 7777765432 1111 100011 1112233332 454 7776522
Q ss_pred CCCceeEEEeCCCC
Q 028925 165 EPSYSTLLYDPNAA 178 (202)
Q Consensus 165 ~~~~~~~~yd~~~~ 178 (202)
...+.+||+++.
T Consensus 197 --~~~v~v~d~~~~ 208 (331)
T 3u4y_A 197 --GNSIGILETQNP 208 (331)
T ss_dssp --TTEEEEEECSST
T ss_pred --CCeEEEEECCCC
Confidence 347899999876
No 94
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=96.02 E-value=0.14 Score=38.01 Aligned_cols=146 Identities=16% Similarity=0.107 Sum_probs=75.9
Q ss_pred CCEEEEEcCcCC-CCCceeeeEEEeCCCCCeEEcCCC--CCCceeeeeEE--EC-CEEEEEcCccCCCCCCcceEEEEeC
Q 028925 14 NGKIYAVGGYGM-DGESLSSAEVYDPDTDKWNLIESL--RRPRWGCFACS--FD-GKLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 14 ~~~iyv~GG~~~-~~~~~~~~~~yd~~t~~W~~~~~~--~~~r~~~~~~~--~~-~~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
+++||+...... .......+++||+.+++++..... ........... -+ ++||+.... ..+.+||+
T Consensus 28 ~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~--------~~l~~~d~ 99 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR--------LGLLVVQT 99 (314)
T ss_dssp TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT--------TEEEEEET
T ss_pred CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC--------CCEEEEeC
Confidence 578998821100 001124689999999888765320 00001122222 25 789987531 25889999
Q ss_pred CCCeEEec-cCc----cce-eeee-EEECCEEEEEeCCC--------------CCeEEEEeCCCCcEEEeccCCCCCCCC
Q 028925 88 ERHTWCQM-KNG----CVM-VTAH-AVVGKKLFCMEWKN--------------QRKLTIFDPEDNSWKMVPVPLTGSSSI 146 (202)
Q Consensus 88 ~~~~W~~~-~~~----~~~-~~~~-~~~~~~iyv~Gg~~--------------~~~~~~yd~~~~~W~~~~~~~~~~~~~ 146 (202)
. ++...+ ... +.. .... ...++++|+..... ...++.||++ .+...+.... ..
T Consensus 100 ~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~----~~ 173 (314)
T 1pjx_A 100 D-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAF----QF 173 (314)
T ss_dssp T-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEE----SS
T ss_pred C-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCC----CC
Confidence 8 776665 311 111 1122 22367899876322 2578999987 5555543111 11
Q ss_pred CeeEEEE-----CC-eEEEEcccCCCCceeEEEeCC
Q 028925 147 GFRFGIL-----DG-KLLLFSLEEEPSYSTLLYDPN 176 (202)
Q Consensus 147 ~~~~~~~-----~~-~i~v~gG~~~~~~~~~~yd~~ 176 (202)
...++.. ++ .||+.... ...+++||++
T Consensus 174 ~~~i~~~~~~d~dg~~l~v~~~~---~~~i~~~~~~ 206 (314)
T 1pjx_A 174 PNGIAVRHMNDGRPYQLIVAETP---TKKLWSYDIK 206 (314)
T ss_dssp EEEEEEEECTTSCEEEEEEEETT---TTEEEEEEEE
T ss_pred cceEEEecccCCCCCEEEEEECC---CCeEEEEECC
Confidence 1233333 34 56765421 2367888765
No 95
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.00 E-value=0.41 Score=37.59 Aligned_cols=145 Identities=14% Similarity=0.134 Sum_probs=79.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE-CCEEEEEcCccCCCCCCcceEEEEeCCCCe-
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF-DGKLYVMGGRSSFTIGNSKFVDVYNPERHT- 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~- 91 (202)
+++||+....+ ..+.++|+.+++-..+.... .. .+.+..- ++.||+..... ...++++|+.+..
T Consensus 141 ~g~lyv~d~~~------~~I~~id~~~g~~~~~~~~~-~~-~~ia~~~~g~~l~~~d~~~------~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 141 NNTVLAYQRDD------PRVRLISVDDNKVTTVHPGF-KG-GKPAVTKDKQRVYSIGWEG------THTVYVYMKASGWA 206 (409)
T ss_dssp TTEEEEEETTT------TEEEEEETTTTEEEEEEETC-CB-CBCEECTTSSEEEEEBSST------TCEEEEEEGGGTTC
T ss_pred CCCEEEEecCC------CcEEEEECCCCEEEEeeccC-CC-CceeEecCCCcEEEEecCC------CceEEEEEcCCCce
Confidence 67899986421 46899999987766553321 11 1222222 34566654321 1268888876542
Q ss_pred EEec----cCccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEecc-CCCCCCCCC-e-eEEEE--CCeEEEE
Q 028925 92 WCQM----KNGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPV-PLTGSSSIG-F-RFGIL--DGKLLLF 160 (202)
Q Consensus 92 W~~~----~~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~-~-~~~~~--~~~i~v~ 160 (202)
...+ +.......+.++. ++.||+.. ....+++||+++..-..+.. ......... . .++.. ++.||+.
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d--~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVD--SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEEC--TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEE--CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 2233 1111122223332 68899954 35689999999887665521 111111122 2 44444 6899997
Q ss_pred cccCCCCceeEEEeCCC
Q 028925 161 SLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 161 gG~~~~~~~~~~yd~~~ 177 (202)
.. ....+++|+++.
T Consensus 285 d~---~~~~I~~~~~~g 298 (409)
T 3hrp_A 285 DQ---NLSSVYKITPDG 298 (409)
T ss_dssp ET---TTTEEEEECTTC
T ss_pred eC---CCCEEEEEecCC
Confidence 52 244788998775
No 96
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.15 Score=38.56 Aligned_cols=153 Identities=10% Similarity=0.128 Sum_probs=73.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCC--CCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDT--DKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++.++.|+.+ ..+.+||+.. .+++.+..+.........+.+ ++++++.|+.+ ..+.+||..+
T Consensus 118 ~g~~las~s~D------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-------~~i~iW~~~~ 184 (330)
T 2hes_X 118 DGYYLATCSRD------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-------DTVRIWKDYD 184 (330)
T ss_dssp TSCEEEEEETT------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-------SCEEEEEEET
T ss_pred CCCEEEEEeCC------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-------CeEEEEECCC
Confidence 45555555543 3477778732 334443322222112222222 56666666543 3578888777
Q ss_pred CeEEecc---CccceeeeeEEE-C--CEEEEEeCCCCCeEEEEeCCCC------cEEEeccCCCCCCCCCeeEEEECCeE
Q 028925 90 HTWCQMK---NGCVMVTAHAVV-G--KKLFCMEWKNQRKLTIFDPEDN------SWKMVPVPLTGSSSIGFRFGILDGKL 157 (202)
Q Consensus 90 ~~W~~~~---~~~~~~~~~~~~-~--~~iyv~Gg~~~~~~~~yd~~~~------~W~~~~~~~~~~~~~~~~~~~~~~~i 157 (202)
..|..+. .......+.... + +..++.|+ ..+.+.+||..+. .|.............-..++...+.+
T Consensus 185 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s-~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~ 263 (330)
T 2hes_X 185 DDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGS-DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGL 263 (330)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEE-TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSC
T ss_pred CCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEe-CCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCE
Confidence 7665543 111111222222 2 33444444 5667777775432 35544322111112222333334555
Q ss_pred EEEcccCCCCceeEEEeCCCCCCCcceee
Q 028925 158 LLFSLEEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 158 ~v~gG~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
++.++.. ..+.+||..++ .|+.+
T Consensus 264 l~s~~~d---g~v~iw~~~~~---~~~~~ 286 (330)
T 2hes_X 264 IASVGAD---GVLAVYEEVDG---EWKVF 286 (330)
T ss_dssp EEEEETT---SCEEEEEEETT---EEEEE
T ss_pred EEEEeCC---CEEEEEEcCCC---ceEEE
Confidence 5555532 25788888777 77654
No 97
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.99 E-value=0.33 Score=37.83 Aligned_cols=96 Identities=7% Similarity=0.058 Sum_probs=56.6
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEEE
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAVV 108 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~ 108 (202)
+.+++||..+++...+-.+........++. -+|++++.|+.+ ..+.+||..+.+-................
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-------g~v~iWd~~~~~~~~~~~~h~~~v~~~s~ 197 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKRLRNMTSHSARVGSLSW 197 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-------CeEEEEEcCCCcEEEEEeCCCCceEEEee
Confidence 368999999988765544333322223333 367777777643 46899999887643322211122223445
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCcEE
Q 028925 109 GKKLFCMEWKNQRKLTIFDPEDNSWK 134 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~~~W~ 134 (202)
++.+++.|+ ....+..+|.......
T Consensus 198 ~~~~l~sgs-~d~~i~~~d~~~~~~~ 222 (420)
T 4gga_A 198 NSYILSSGS-RSGHIHHHDVRVAEHH 222 (420)
T ss_dssp ETTEEEEEE-TTSEEEEEETTSSSCE
T ss_pred CCCEEEEEe-CCCceeEeeeccccee
Confidence 666666664 5678888887665433
No 98
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.94 E-value=0.64 Score=39.26 Aligned_cols=113 Identities=19% Similarity=0.289 Sum_probs=70.1
Q ss_pred EEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCCCC--------ceeeeeEEECCEEEEEcCccCCCCCC
Q 028925 9 ACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLRRP--------RWGCFACSFDGKLYVMGGRSSFTIGN 78 (202)
Q Consensus 9 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--------r~~~~~~~~~~~iy~~gG~~~~~~~~ 78 (202)
+-++.+++||+.... ..++.+|..|.+ |+.-...+.. ......++.+++||+.+.
T Consensus 65 ~P~v~~g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~-------- 129 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL-------- 129 (689)
T ss_dssp CCEEETTEEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------
T ss_pred cCEEECCEEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc--------
Confidence 445679999997642 358888987766 7764332211 112234567888887642
Q ss_pred cceEEEEeCCCC--eEEeccC-cc----ceeeeeEEECCEEEEEeCC----CCCeEEEEeCCCCc--EEEe
Q 028925 79 SKFVDVYNPERH--TWCQMKN-GC----VMVTAHAVVGKKLFCMEWK----NQRKLTIFDPEDNS--WKMV 136 (202)
Q Consensus 79 ~~~~~~yd~~~~--~W~~~~~-~~----~~~~~~~~~~~~iyv~Gg~----~~~~~~~yd~~~~~--W~~~ 136 (202)
...+..+|..+. .|+.-.. .. ....+..+.++.||+..+. ....+..||.++.+ |+.-
T Consensus 130 dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 130 DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 246889998776 4776442 11 1122345678888874321 24689999998876 8865
No 99
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.92 E-value=0.36 Score=36.27 Aligned_cols=134 Identities=13% Similarity=0.030 Sum_probs=67.3
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-Cccceeeee-EEE
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-NGCVMVTAH-AVV 108 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~-~~~ 108 (202)
..+.+||+.+.+-...-..........+..-+++.++.|+.+ ..+.+||..+.+-...- .......+. ...
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d-------g~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV-------GKVNIFGVESGKKEYSLDTRGKFILSIAYSP 174 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT-------SEEEEEETTTCSEEEEEECSSSCEEEEEECT
T ss_pred CcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC-------CcEEEEEcCCCceeEEecCCCceEEEEEECC
Confidence 357788887765432211111111112222366777766543 46788887766432211 111111222 223
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 109 GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+++.++.|+ ..+.+.+||..+.+-...- . .. ...-.+++. .++++++.|+.. ..+.+||..+.
T Consensus 175 dg~~lasg~-~dg~i~iwd~~~~~~~~~~-~-~h-~~~v~~l~~spd~~~l~s~s~d---g~i~iwd~~~~ 238 (321)
T 3ow8_A 175 DGKYLASGA-IDGIINIFDIATGKLLHTL-E-GH-AMPIRSLTFSPDSQLLVTASDD---GYIKIYDVQHA 238 (321)
T ss_dssp TSSEEEEEE-TTSCEEEEETTTTEEEEEE-C-CC-SSCCCEEEECTTSCEEEEECTT---SCEEEEETTTC
T ss_pred CCCEEEEEc-CCCeEEEEECCCCcEEEEE-c-cc-CCceeEEEEcCCCCEEEEEcCC---CeEEEEECCCc
Confidence 666666665 5678999999877643321 1 11 011112222 367777777542 25788887765
No 100
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.88 E-value=0.3 Score=36.02 Aligned_cols=138 Identities=9% Similarity=0.004 Sum_probs=75.1
Q ss_pred EEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEec
Q 028925 16 KIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQM 95 (202)
Q Consensus 16 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~ 95 (202)
.||+++..+ ..+++||+.++ .+.... +.......+..-+|++|+.... ...+.+||+.+.+.+.+
T Consensus 41 ~l~~~~~~~------~~i~~~~~~~~-~~~~~~-~~~~~~~l~~~~dg~l~v~~~~-------~~~i~~~d~~~g~~~~~ 105 (296)
T 3e5z_A 41 AVIFSDVRQ------NRTWAWSDDGQ-LSPEMH-PSHHQNGHCLNKQGHLIACSHG-------LRRLERQREPGGEWESI 105 (296)
T ss_dssp EEEEEEGGG------TEEEEEETTSC-EEEEES-SCSSEEEEEECTTCCEEEEETT-------TTEEEEECSTTCCEEEE
T ss_pred EEEEEeCCC------CEEEEEECCCC-eEEEEC-CCCCcceeeECCCCcEEEEecC-------CCeEEEEcCCCCcEEEE
Confidence 588886432 36899999987 555432 2221111112237888876421 24699999988887765
Q ss_pred cCc---cc---eeeeeEEECCEEEEEe---CC-------------CCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-
Q 028925 96 KNG---CV---MVTAHAVVGKKLFCME---WK-------------NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI- 152 (202)
Q Consensus 96 ~~~---~~---~~~~~~~~~~~iyv~G---g~-------------~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~- 152 (202)
... .. ....+...++++|+.. |. ....++.||++ .+...+... . ....+++.
T Consensus 106 ~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~-~---~~~~gi~~s 180 (296)
T 3e5z_A 106 ADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRD-R---VKPNGLAFL 180 (296)
T ss_dssp ECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECC-C---SSEEEEEEC
T ss_pred eeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecC-C---CCCccEEEC
Confidence 411 10 1112233378899863 11 13578999987 555554311 1 11123333
Q ss_pred ECCeEEEEcccCCCCceeEEEeCC
Q 028925 153 LDGKLLLFSLEEEPSYSTLLYDPN 176 (202)
Q Consensus 153 ~~~~i~v~gG~~~~~~~~~~yd~~ 176 (202)
.++++++... ....+++||..
T Consensus 181 ~dg~~lv~~~---~~~~i~~~~~~ 201 (296)
T 3e5z_A 181 PSGNLLVSDT---GDNATHRYCLN 201 (296)
T ss_dssp TTSCEEEEET---TTTEEEEEEEC
T ss_pred CCCCEEEEeC---CCCeEEEEEEC
Confidence 2566664442 22367888875
No 101
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.87 E-value=0.21 Score=38.13 Aligned_cols=134 Identities=13% Similarity=0.143 Sum_probs=66.7
Q ss_pred eeEEEeCCCCCeEEcCCC--CCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-CccceeeeeE
Q 028925 32 SAEVYDPDTDKWNLIESL--RRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-NGCVMVTAHA 106 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~--~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~ 106 (202)
.+.+||+.+++-...... ........++. -+++.++.|+.+ ..+.+||..+++-...- ..........
T Consensus 104 ~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-------~~i~iwd~~~~~~~~~~~~h~~~V~~~~ 176 (344)
T 4gqb_B 104 AVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-------ICIKVWDLAQQVVLSSYRAHAAQVTCVA 176 (344)
T ss_dssp EEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred EEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-------CeEEEEECCCCcEEEEEcCcCCceEEEE
Confidence 578888887653222110 00011112222 367777776643 46889999887633321 1111112222
Q ss_pred E-ECC-EEEEEeCCCCCeEEEEeCCCCcEEEe-ccCCCCCCCCCeeEEE--ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 107 V-VGK-KLFCMEWKNQRKLTIFDPEDNSWKMV-PVPLTGSSSIGFRFGI--LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 107 ~-~~~-~iyv~Gg~~~~~~~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
. .++ .+++.++ ..+.+.+||..+.+-... ...... ....+++. .++++++.|+.. ..+.+||..+.
T Consensus 177 ~~~~~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~l~sg~~d---g~v~~wd~~~~ 247 (344)
T 4gqb_B 177 ASPHKDSVFLSCS-EDNRILLWDTRCPKPASQIGCSAPG--YLPTSLAWHPQQSEVFVFGDEN---GTVSLVDTKST 247 (344)
T ss_dssp ECSSCTTEEEEEE-TTSCEEEEETTSSSCEEECC----C--CCEEEEEECSSCTTEEEEEETT---SEEEEEESCC-
T ss_pred ecCCCCCceeeec-cccccccccccccceeeeeecceee--ccceeeeecCCCCcceEEeccC---CcEEEEECCCC
Confidence 2 233 4666554 567899999987764432 211111 11122222 256788877542 26778887764
No 102
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.87 E-value=0.41 Score=40.33 Aligned_cols=119 Identities=18% Similarity=0.220 Sum_probs=72.1
Q ss_pred eeEEECCEEEEEcCccCCCCCCcceEEEEeCCCC--eEEeccCcc----------ceeeeeEEECCEEEEEeCCCCCeEE
Q 028925 57 FACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH--TWCQMKNGC----------VMVTAHAVVGKKLFCMEWKNQRKLT 124 (202)
Q Consensus 57 ~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~----------~~~~~~~~~~~~iyv~Gg~~~~~~~ 124 (202)
+-++.++.||+.+. ...++.+|..+. .|+.-.... ....+..+.+++||+.. ....+.
T Consensus 72 ~P~v~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~--~dg~l~ 141 (677)
T 1kb0_A 72 TPVVVDGIMYVSAS--------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGA--WDGRLI 141 (677)
T ss_dssp CCEEETTEEEEECG--------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEEC--TTSEEE
T ss_pred CCEEECCEEEEECC--------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEc--CCCEEE
Confidence 34567999998764 245888888766 487654211 11123456788999864 467899
Q ss_pred EEeCCCCc--EEEecc-CCCCCCCCCeeEEEECCeEEEEcccCC--CCceeEEEeCCCCCCCcceee
Q 028925 125 IFDPEDNS--WKMVPV-PLTGSSSIGFRFGILDGKLLLFSLEEE--PSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 125 ~yd~~~~~--W~~~~~-~~~~~~~~~~~~~~~~~~i~v~gG~~~--~~~~~~~yd~~~~~~~~W~~~ 186 (202)
.+|.++.+ |+.-.. ...........-++.+++||+-.+..+ ....++.||.+++.. .|+.-
T Consensus 142 alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~-~W~~~ 207 (677)
T 1kb0_A 142 ALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGER-KWRWF 207 (677)
T ss_dssp EEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE-EEEEE
T ss_pred EEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcE-EEEec
Confidence 99998775 887532 111111122233466888888543221 234799999987621 47654
No 103
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.85 E-value=0.75 Score=39.30 Aligned_cols=145 Identities=9% Similarity=0.110 Sum_probs=84.7
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCc---eeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPR---WGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r---~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
+++|||... ..+.+||+.+++........... .......-+|.||+... ..+.+||+.++
T Consensus 98 ~g~lWigT~--------~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~---------~gl~~~~~~~~ 160 (795)
T 4a2l_A 98 QGRVWIGTR--------DGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP---------EGLIMFDIKES 160 (795)
T ss_dssp TSCEEEEES--------SCEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET---------TEEEEEETTTT
T ss_pred CCCEEEEeC--------CchheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC---------CceEEEECCCC
Confidence 467887542 23789999988887664321110 11222234888998642 35899999998
Q ss_pred eEEeccCc-cc-e-eeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE-EECCeEEEEcccCC
Q 028925 91 TWCQMKNG-CV-M-VTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG-ILDGKLLLFSLEEE 165 (202)
Q Consensus 91 ~W~~~~~~-~~-~-~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~ 165 (202)
++...... +. . .... ...++.|++.. ....+.+||+++++++..... .. ...-.++. ..++.|++-. .
T Consensus 161 ~~~~~~~~~~~~~~i~~i~~d~~g~lwigt--~~~Gl~~~~~~~~~~~~~~~~-~~-~~~i~~i~~d~~g~lwigt-~-- 233 (795)
T 4a2l_A 161 KFIDDSFSTAMHKTIASTLYRQGDQIYIGT--STDGLYTYSITQKTFEKVIPI-LG-TKQIQAILQQSPTRIWVAT-E-- 233 (795)
T ss_dssp EEECSSSCHHHHTCCEEEEEEETTEEEEEE--SSSCEEEEETTTCCEEECC------CCCEEEEEEEETTEEEEEE-B--
T ss_pred EEEeccCCCCCCcceEEEEECCCCCEEEEE--CCCCEEEEeCCCCeEEEecCC-CC-CCeeEEEEEcCCCCEEEEE-C--
Confidence 88766521 11 1 1122 22478888842 345799999999998876411 11 11112222 2467777743 1
Q ss_pred CCceeEEEeCCCCCCCcceee
Q 028925 166 PSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 166 ~~~~~~~yd~~~~~~~~W~~~ 186 (202)
...+++||++++ +++..
T Consensus 234 -~~Gl~~~~~~~~---~~~~~ 250 (795)
T 4a2l_A 234 -GAGLFLINPKTK---EIKNY 250 (795)
T ss_dssp -SSCEEEEETTTT---EEEEE
T ss_pred -CCCeEEEeCCCC---eEEEe
Confidence 124888999887 77765
No 104
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.85 E-value=0.42 Score=36.47 Aligned_cols=141 Identities=9% Similarity=-0.001 Sum_probs=76.3
Q ss_pred EEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE-E--CCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 16 KIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS-F--DGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 16 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
++++.|+.+ ..+.+||+.+.+....-............. . ++++++.++.+ ..+.+||..+...
T Consensus 87 ~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 87 TTVAVGSKG------GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-------GATTLRDFSGSVI 153 (383)
T ss_dssp TEEEEEEBT------SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-------TEEEEEETTSCEE
T ss_pred CEEEEEcCC------CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-------CEEEEEECCCCce
Confidence 577776653 358889998887765533211222222222 2 34566665432 4688999987766
Q ss_pred EeccCcc---ceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCe-EEEEcccCCC
Q 028925 93 CQMKNGC---VMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGK-LLLFSLEEEP 166 (202)
Q Consensus 93 ~~~~~~~---~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~-i~v~gG~~~~ 166 (202)
..+.... ....+. ...++..++.|+ ..+.+.+||.....-..+... ...-.+++.. +++ +++.++..
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s~~~d-- 226 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGD-STGRLLLLGLDGHEIFKEKLH----KAKVTHAEFNPRCDWLMATSSVD-- 226 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEE-TTSEEEEEETTSCEEEEEECS----SSCEEEEEECSSCTTEEEEEETT--
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEEC-CCCCEEEEECCCCEEEEeccC----CCcEEEEEECCCCCCEEEEEeCC--
Confidence 6554221 112222 223556666654 678999999965544444311 1111222222 344 66666542
Q ss_pred CceeEEEeCCC
Q 028925 167 SYSTLLYDPNA 177 (202)
Q Consensus 167 ~~~~~~yd~~~ 177 (202)
..+.+||..+
T Consensus 227 -~~i~iwd~~~ 236 (383)
T 3ei3_B 227 -ATVKLWDLRN 236 (383)
T ss_dssp -SEEEEEEGGG
T ss_pred -CEEEEEeCCC
Confidence 2678888765
No 105
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=95.83 E-value=0.37 Score=35.71 Aligned_cols=131 Identities=13% Similarity=0.040 Sum_probs=65.8
Q ss_pred eeeEEEeCCCCCeEEcCCCCCC--ceeeeeEEECC-EEEEEcCccCCCCCCcceEEEEeCCCCeEEe-cc-Cccc----e
Q 028925 31 SSAEVYDPDTDKWNLIESLRRP--RWGCFACSFDG-KLYVMGGRSSFTIGNSKFVDVYNPERHTWCQ-MK-NGCV----M 101 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~--r~~~~~~~~~~-~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~-~~-~~~~----~ 101 (202)
..+.++|+.+.+-...-.++.. +....+..-++ .+|+.+.. ...+.++|+.+.+-.. ++ +.+. .
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~ 83 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK-------SESLVKIDLVTGETLGRIDLSTPEERVKS 83 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT-------TTEEEEEETTTCCEEEEEECCBTTEEEEC
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC-------CCeEEEEECCCCCeEeeEEcCCccccccc
Confidence 3688899887765432222221 11112222355 57766532 2469999988776433 22 1100 1
Q ss_pred eeeeEE-ECC-EEEEEeCC----------CCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCe-EEEEcccCCCC
Q 028925 102 VTAHAV-VGK-KLFCMEWK----------NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGK-LLLFSLEEEPS 167 (202)
Q Consensus 102 ~~~~~~-~~~-~iyv~Gg~----------~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~-i~v~gG~~~~~ 167 (202)
...... .++ .+|+.... ....+.+||.++.+....-.. .. ....++. .+++ ||+.+
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~---~~~~~~~s~dg~~l~~~~------ 153 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PR---QITMLAWARDGSKLYGLG------ 153 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CS---SCCCEEECTTSSCEEEES------
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CC---CcceeEECCCCCEEEEeC------
Confidence 112222 244 67776411 247899999988765443211 11 1112222 2444 66652
Q ss_pred ceeEEEeCCCC
Q 028925 168 YSTLLYDPNAA 178 (202)
Q Consensus 168 ~~~~~yd~~~~ 178 (202)
..+.+||++++
T Consensus 154 ~~i~~~d~~~~ 164 (337)
T 1pby_B 154 RDLHVMDPEAG 164 (337)
T ss_dssp SSEEEEETTTT
T ss_pred CeEEEEECCCC
Confidence 25788887765
No 106
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=95.82 E-value=0.4 Score=38.40 Aligned_cols=144 Identities=13% Similarity=0.059 Sum_probs=76.9
Q ss_pred EEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEE--c----CCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcce
Q 028925 9 ACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNL--I----ESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKF 81 (202)
Q Consensus 9 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~--~----~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~ 81 (202)
+++.+++++|+|-|. .+|+++.....+.. + +.||... .++... .++++|+|-|. .
T Consensus 267 Ai~~~~ge~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~Wp~LP~~i-DAa~~~~~~g~~~fFKg~---------~ 328 (450)
T 1su3_A 267 AITTIRGEVMFFKDR--------FYMRTNPFYPEVELNFISVFWPQLPNGL-EAAYEFADRDEVRFFKGN---------K 328 (450)
T ss_dssp EEEEETTEEEEEETT--------EEEECCTTSSSCEEEEGGGTCTTSCSSC-CEEEEEGGGTEEEEEETT---------E
T ss_pred eEEecCCeEEEEeCC--------EEEEEcCCCCcccceehhHhccCCCCCe-eEEEEEcCCCeEEEEeCC---------E
Confidence 345679999999763 46777766544432 1 1233322 222122 37999999653 4
Q ss_pred EEEEeCCCCe--E-------EeccCccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEE-----EeccCCCCCCC
Q 028925 82 VDVYNPERHT--W-------CQMKNGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWK-----MVPVPLTGSSS 145 (202)
Q Consensus 82 ~~~yd~~~~~--W-------~~~~~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~-----~~~~~~~~~~~ 145 (202)
+++|+..+-. + .-++..+....++... ++++|++-| +..|+||..+++-. .+....+....
T Consensus 329 ~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG---~~yw~yd~~~~~~~~gYPk~I~~~fpgip~ 405 (450)
T 1su3_A 329 YWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA---NKYWRYDEYKRSMDPGYPKMIAHDFPGIGH 405 (450)
T ss_dssp EEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET---TEEEEEETTTTEECSSCSEEHHHHSTTSCS
T ss_pred EEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC---CEEEEEeCCCccccCCCCcchhhcCCCCCC
Confidence 6777642100 0 0011111122333333 589999954 68899997754322 11111111111
Q ss_pred CCeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 146 IGFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 146 ~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.--++...++++|.+-|. ..|+||..+.
T Consensus 406 ~iDAA~~~~g~~YFFkg~-----~ywr~d~~~~ 433 (450)
T 1su3_A 406 KVDAVFMKDGFFYFFHGT-----RQYKFDPKTK 433 (450)
T ss_dssp CCSEEEEETTEEEEEETT-----EEEEEETTTT
T ss_pred CccEEEEcCCeEEEEeCC-----EEEEEECCcc
Confidence 222333578999999754 5788988775
No 107
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.81 E-value=0.42 Score=36.12 Aligned_cols=144 Identities=12% Similarity=0.122 Sum_probs=71.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe--
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT-- 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~-- 91 (202)
++++++.|+.+ ..+.+||..+.+-...-+.........+..-++++++.||.+ ..+.+||..+..
T Consensus 66 d~~~l~s~s~D------g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-------~~v~iw~~~~~~~~ 132 (340)
T 1got_B 66 DSRLLLSASQD------GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD-------NICSIYNLKTREGN 132 (340)
T ss_dssp TSSEEEEEETT------TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT-------CEEEEEETTTCSBS
T ss_pred CCCEEEEEeCC------CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC-------CeEEEEECccCCCc
Confidence 55666666653 357888987765432211111111111112366777777643 467888876542
Q ss_pred EEe---ccCccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCC
Q 028925 92 WCQ---MKNGCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEP 166 (202)
Q Consensus 92 W~~---~~~~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~ 166 (202)
... +.......... ...++.++. ++ ..+.+.+||..+.+-...- . .. ...-.+++. .++++++.|+..
T Consensus 133 ~~~~~~~~~h~~~v~~~~~~~~~~l~s-~s-~d~~i~~wd~~~~~~~~~~-~-~h-~~~v~~~~~~~~~~~l~sg~~d-- 205 (340)
T 1got_B 133 VRVSRELAGHTGYLSCCRFLDDNQIVT-SS-GDTTCALWDIETGQQTTTF-T-GH-TGDVMSLSLAPDTRLFVSGACD-- 205 (340)
T ss_dssp CEEEEEEECCSSCEEEEEEEETTEEEE-EE-TTSCEEEEETTTTEEEEEE-C-CC-SSCEEEEEECTTSSEEEEEETT--
T ss_pred ceeEEEecCCCccEEEEEECCCCcEEE-EE-CCCcEEEEECCCCcEEEEE-c-CC-CCceEEEEECCCCCEEEEEeCC--
Confidence 111 11111111222 233556443 33 5678999999887644321 1 11 111122222 256777777542
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
..+.+||..+.
T Consensus 206 -~~v~~wd~~~~ 216 (340)
T 1got_B 206 -ASAKLWDVREG 216 (340)
T ss_dssp -SCEEEEETTTC
T ss_pred -CcEEEEECCCC
Confidence 25777777664
No 108
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=95.81 E-value=0.6 Score=37.91 Aligned_cols=130 Identities=8% Similarity=-0.041 Sum_probs=68.6
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccC--ccceeeeeE
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKN--GCVMVTAHA 106 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~~~~~~~ 106 (202)
..+.+||..+.+... ..+...........+ ++++++.|+.+ ..+.+||..+.+-...-. ......+..
T Consensus 467 ~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d-------g~i~iw~~~~~~~~~~~~~~h~~~v~~~~ 538 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM-------GKILLYDLQSREVKTSRWAFRTSKINAIS 538 (615)
T ss_dssp SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEEEECCSCCCSSCEEEEE
T ss_pred CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC-------CeEEEeeCCCCcceeEeecCCCCceeEEE
Confidence 357888988765532 222222222223333 77777777643 468999988776443322 222222222
Q ss_pred -EE----------CCEEEEEeCCCCCeEEEEeCCCCc--EEEeccCCCCCCCCCeeEE-EECCeEEEEcccCCCCceeEE
Q 028925 107 -VV----------GKKLFCMEWKNQRKLTIFDPEDNS--WKMVPVPLTGSSSIGFRFG-ILDGKLLLFSLEEEPSYSTLL 172 (202)
Q Consensus 107 -~~----------~~~iyv~Gg~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~~~~~~~~ 172 (202)
.. ++++++.|+ ..+.+.+||..+.. ...+. .. ...-.+++ ..+++ ++.++.. ..+.+
T Consensus 539 ~sp~~~~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~---~h-~~~v~~l~~s~~~~-l~s~~~d---~~v~i 609 (615)
T 1pgu_A 539 WKPAEKGANEEEIEEDLVATGS-LDTNIFIYSVKRPMKIIKALN---AH-KDGVNNLLWETPST-LVSSGAD---ACIKR 609 (615)
T ss_dssp ECCCC------CCSCCEEEEEE-TTSCEEEEESSCTTCCEEETT---SS-TTCEEEEEEEETTE-EEEEETT---SCEEE
T ss_pred EcCccccccccccCCCEEEEEc-CCCcEEEEECCCCceechhhh---cC-ccceEEEEEcCCCC-eEEecCC---ceEEE
Confidence 22 566776665 56789999998762 22221 11 11112222 34777 6666542 25777
Q ss_pred EeCCC
Q 028925 173 YDPNA 177 (202)
Q Consensus 173 yd~~~ 177 (202)
||.++
T Consensus 610 w~~~~ 614 (615)
T 1pgu_A 610 WNVVL 614 (615)
T ss_dssp EEEC-
T ss_pred Eeeec
Confidence 77654
No 109
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.80 E-value=0.37 Score=35.43 Aligned_cols=135 Identities=8% Similarity=0.055 Sum_probs=67.9
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEEE
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAVV 108 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~ 108 (202)
+.+.+||+.+++....-.+........++. -+++.++.|+.+ ..+.+||..+.+-................
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-------g~v~iw~~~~~~~~~~~~~h~~~~~~~~~ 117 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-------AEVQLWDVQQQKRLRNMTSHSARVGSLSW 117 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-------CcEEEeecCCceeEEEecCccceEEEeec
Confidence 358899999988765433322222222222 367777777643 46889998887643322111111222334
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE-EECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 109 GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG-ILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
++.+.+.|+ ....+..++..+......... .. ........ ..+++.++.++.. ..+.+||..++
T Consensus 118 ~~~~l~s~~-~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~ 182 (318)
T 4ggc_A 118 NSYILSSGS-RSGHIHHHDVRVAEHHVATLS-GH-SQEVCGLRWAPDGRHLASGGND---NLVNVWPSAPG 182 (318)
T ss_dssp ETTEEEEEE-TTSEEEEEETTSSSCEEEEEE-CC-SSCEEEEEECTTSSEEEEEETT---SCEEEEESSCB
T ss_pred CCCEEEEEe-cCCceEeeecCCCceeEEEEc-Cc-cCceEEEEEcCCCCEEEEEecC---cceeEEECCCC
Confidence 445555554 556666666665544333211 11 11111222 2355666655432 25677777653
No 110
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.79 E-value=0.16 Score=37.82 Aligned_cols=145 Identities=8% Similarity=-0.004 Sum_probs=71.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
++++.+.|+.+ ..+.+||..+.+-...-.............-++++++.|+.+ ..+.+||..+.+-.
T Consensus 24 ~~~~l~s~~~d------g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-------~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 24 TEPWVLTTLYS------GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-------FRIRVFNYNTGEKV 90 (304)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-------SEEEEEETTTCCEE
T ss_pred CCCEEEEEcCC------CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-------CEEEEEECCCCcEE
Confidence 56666666653 357888988765422211111111122222356666666543 46889998876532
Q ss_pred e-ccCccceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE--CCeEEEEcccCCCCce
Q 028925 94 Q-MKNGCVMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEEPSYS 169 (202)
Q Consensus 94 ~-~~~~~~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~~~~~ 169 (202)
. +........+.. ..++.+++.|+ ..+.+.+||..++. ...... ......-.+++.. ++.+++.|+.. ..
T Consensus 91 ~~~~~h~~~v~~~~~~~~~~~l~sgs-~D~~v~lWd~~~~~-~~~~~~-~~h~~~v~~v~~~p~~~~~l~sgs~D---~~ 164 (304)
T 2ynn_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENNW-ALEQTF-EGHEHFVMCVAFNPKDPSTFASGCLD---RT 164 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEE-TTSCEEEEEGGGTT-EEEEEE-CCCCSCEEEEEECTTCTTEEEEEETT---SE
T ss_pred EEEeCCCCcEEEEEEcCCCCEEEEEC-CCCeEEEEECCCCc-chhhhh-cccCCcEEEEEECCCCCCEEEEEeCC---Ce
Confidence 2 222222222222 23555555554 67889999987652 111101 1111111222222 45677776543 25
Q ss_pred eEEEeCCC
Q 028925 170 TLLYDPNA 177 (202)
Q Consensus 170 ~~~yd~~~ 177 (202)
+.+||..+
T Consensus 165 v~iwd~~~ 172 (304)
T 2ynn_A 165 VKVWSLGQ 172 (304)
T ss_dssp EEEEETTC
T ss_pred EEEEECCC
Confidence 77777754
No 111
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.79 E-value=0.091 Score=41.35 Aligned_cols=143 Identities=5% Similarity=-0.008 Sum_probs=74.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE---ECCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS---FDGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~---~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
++++.+.|+.+ ..+.+||..+++-...-.+......-.... .++.+++.|+.+ ..+.+||..++
T Consensus 131 ~~~~lasGs~d------g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-------~~v~iwd~~~~ 197 (435)
T 4e54_B 131 HPSTVAVGSKG------GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-------GTTRLQDFKGN 197 (435)
T ss_dssp CTTCEEEEETT------SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-------SCEEEEETTSC
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-------CEEEEeeccCC
Confidence 45677777654 357888988766433322211111112222 256666666543 45888998887
Q ss_pred eEEeccCc---cceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCee-EEEE--CCeEEEEccc
Q 028925 91 TWCQMKNG---CVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFR-FGIL--DGKLLLFSLE 163 (202)
Q Consensus 91 ~W~~~~~~---~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~--~~~i~v~gG~ 163 (202)
....+... .....+. ...++.+++.|+ ..+.+.+||.....-..+. .. ..... ++.. ++.+++.|+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-~dg~i~~wd~~~~~~~~~~---~h--~~~v~~v~~~p~~~~~~~s~s~ 271 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGD-NVGNVILLNMDGKELWNLR---MH--KKKVTHVALNPCCDWFLATASV 271 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEEC-SSSBEEEEESSSCBCCCSB---CC--SSCEEEEEECTTCSSEEEEEET
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEe-CCCcEeeeccCcceeEEEe---cc--cceEEeeeecCCCceEEEEecC
Confidence 65554411 1111222 233666777765 6778999998754322221 11 11222 2222 3456666654
Q ss_pred CCCCceeEEEeCCCC
Q 028925 164 EEPSYSTLLYDPNAA 178 (202)
Q Consensus 164 ~~~~~~~~~yd~~~~ 178 (202)
. ..+.+||..+.
T Consensus 272 d---~~v~iwd~~~~ 283 (435)
T 4e54_B 272 D---QTVKIWDLRQV 283 (435)
T ss_dssp T---SBCCEEETTTC
T ss_pred c---ceeeEEecccc
Confidence 2 25677777653
No 112
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.78 E-value=0.42 Score=35.88 Aligned_cols=134 Identities=19% Similarity=0.039 Sum_probs=71.1
Q ss_pred eeeEEEeCCCCCeEEcCC-CCCCceeeeeEE-ECCE-EEEEcCccCCCCCCcceEEEEeCCCC---eEEeccCccceeee
Q 028925 31 SSAEVYDPDTDKWNLIES-LRRPRWGCFACS-FDGK-LYVMGGRSSFTIGNSKFVDVYNPERH---TWCQMKNGCVMVTA 104 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~-~~~~r~~~~~~~-~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~~~ 104 (202)
..+++||+.+.+.+.... +..+. .++. -+++ ||+.-.. ...+.+|+.... +.+.....+. ...
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p~---gia~~~dg~~lyv~d~~-------~~~I~~~~~~~~~~~~~~~~~~~~g-P~g 233 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVPG---GAEVSADSSFVLVAEFL-------SHQIVKYWLEGPKKGTAEVLVKIPN-PGN 233 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCCC---EEEECTTSSEEEEEEGG-------GTEEEEEESSSTTTTCEEEEEECSS-EEE
T ss_pred ceEEEEeCCCCEEEEeccCCccCc---ceEECCCCCEEEEEeCC-------CCeEEEEECCCCcCCccceEEeCCC-CCC
Confidence 579999998777654321 11121 2222 2444 7776321 246888887642 2332221111 222
Q ss_pred eEE-ECCEEEEEeCC---------CCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEe
Q 028925 105 HAV-VGKKLFCMEWK---------NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYD 174 (202)
Q Consensus 105 ~~~-~~~~iyv~Gg~---------~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd 174 (202)
+.+ -++.||+.... ....+.+||++...-..+..+..........++..+++|||... ....+.+|+
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~---~~~~i~~~~ 310 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTL---FHGSVGILV 310 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECS---SCSEEEEEE
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeec---CCCceEEEe
Confidence 222 25789988532 13568999997665555553321112333344567899999752 234688888
Q ss_pred CCCC
Q 028925 175 PNAA 178 (202)
Q Consensus 175 ~~~~ 178 (202)
++.+
T Consensus 311 ~~~~ 314 (322)
T 2fp8_A 311 YDKK 314 (322)
T ss_dssp C---
T ss_pred cccc
Confidence 7653
No 113
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.78 E-value=0.74 Score=38.74 Aligned_cols=144 Identities=13% Similarity=0.094 Sum_probs=81.6
Q ss_pred eeeEEEeCCCC--CeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCC---eEEeccCccceeeee
Q 028925 31 SSAEVYDPDTD--KWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH---TWCQMKNGCVMVTAH 105 (202)
Q Consensus 31 ~~~~~yd~~t~--~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~~~~ 105 (202)
++++.+|+.+. ++..+.+........ ....+++||+.+.... ....++..|..+. .|+.+.+........
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~----~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 333 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDA----PNRRLVTVDAANPGPAHWRDLIPERQQVLTV 333 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTC----TTCEEEEEETTSCCGGGCEEEECCCSSCEEE
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCC----CCCEEEEEeCCCCCccccEEEecCCCCEEEE
Confidence 57899998765 677775433222222 3345788988865431 2457888887763 477765433222244
Q ss_pred EEECCEEEEEeC-CCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE---ECCeEEEEc-ccCCCCceeEEEeCCCCCC
Q 028925 106 AVVGKKLFCMEW-KNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI---LDGKLLLFS-LEEEPSYSTLLYDPNAASG 180 (202)
Q Consensus 106 ~~~~~~iyv~Gg-~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~---~~~~i~v~g-G~~~~~~~~~~yd~~~~~~ 180 (202)
...++.|++..- .....++++|.+....+.+..+... ...... .++.|++.. +...+ ..++.||.+++
T Consensus 334 s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~----~~~~~~~~~d~~~l~~~~ss~~tP-~~l~~~d~~~g-- 406 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLG----SVSGFNGKHDDPALYFGFENYAQP-PTLYRFEPKSG-- 406 (693)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSS----EEEECCCCTTCSCEEEEEECSSSC-CEEEEECTTTC--
T ss_pred EEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCc----eEEeeecCCCCCEEEEEecCCCCC-CEEEEEECCCC--
Confidence 455666665532 1234788999987766666422111 111111 134555443 33333 37999999887
Q ss_pred Ccceeec
Q 028925 181 SEWQTSK 187 (202)
Q Consensus 181 ~~W~~~~ 187 (202)
+.+.+.
T Consensus 407 -~~~~l~ 412 (693)
T 3iuj_A 407 -AISLYR 412 (693)
T ss_dssp -CEEEEE
T ss_pred -eEEEEE
Confidence 776663
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=95.73 E-value=0.22 Score=37.70 Aligned_cols=154 Identities=14% Similarity=0.181 Sum_probs=75.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCC-ceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRP-RWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
++++++.|+.+ ..+.+||+.+.+-......... .....+..-++++++.|+.+ ..+.+||..+.+-
T Consensus 138 ~~~~l~s~s~d------g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-------g~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWADNR------GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-------GILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEETT------CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-------SCEEEEESSCTTS
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-------CEEEEEECCCCCC
Confidence 45566666653 3578889988776433221111 11111122367777777643 4689999887653
Q ss_pred E--eccC-ccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEE-eccCCCCCCCCC-eeEEEE-CCeEEEEcccCC
Q 028925 93 C--QMKN-GCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKM-VPVPLTGSSSIG-FRFGIL-DGKLLLFSLEEE 165 (202)
Q Consensus 93 ~--~~~~-~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~-~~~~~~-~~~i~v~gG~~~ 165 (202)
. .+.. .......... .++..++.++ ...+.+||..+.+-.. +........... .+++.. +++.++.++...
T Consensus 205 ~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d 282 (343)
T 3lrv_A 205 ASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNES 282 (343)
T ss_dssp CCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTT
T ss_pred CccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCC
Confidence 2 2222 1222222222 2566666665 3389999987654211 110000000111 123332 567766654322
Q ss_pred CCceeEEEeCCCCCCCccee
Q 028925 166 PSYSTLLYDPNAASGSEWQT 185 (202)
Q Consensus 166 ~~~~~~~yd~~~~~~~~W~~ 185 (202)
....+|.|+.... .|..
T Consensus 283 ~~i~v~~~~~~~~---~~~~ 299 (343)
T 3lrv_A 283 NSLTIYKFDKKTK---NWTK 299 (343)
T ss_dssp TEEEEEEECTTTC---SEEE
T ss_pred CcEEEEEEccccc---ceEe
Confidence 2334444444555 7886
No 115
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.71 E-value=0.52 Score=36.44 Aligned_cols=145 Identities=18% Similarity=0.177 Sum_probs=73.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++.++.|+.+ ..+.+||..+.+-... +........... -+++.++.|+.+ ..+.+||..+.+
T Consensus 134 dg~~l~s~~~d------~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~p~~~~l~s~s~d-------~~v~iwd~~~~~ 198 (393)
T 1erj_A 134 DGKFLATGAED------RLIRIWDIENRKIVMI--LQGHEQDIYSLDYFPSGDKLVSGSGD-------RTVRIWDLRTGQ 198 (393)
T ss_dssp TSSEEEEEETT------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTE
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcEEEE--EccCCCCEEEEEEcCCCCEEEEecCC-------CcEEEEECCCCe
Confidence 56677777653 3578889887654322 111111112222 255655555532 468899998876
Q ss_pred EEeccCccceeeeeEE-E-CCEEEEEeCCCCCeEEEEeCCCCcEEEe-ccCC---CCCCCCCeeEEE-ECCeEEEEcccC
Q 028925 92 WCQMKNGCVMVTAHAV-V-GKKLFCMEWKNQRKLTIFDPEDNSWKMV-PVPL---TGSSSIGFRFGI-LDGKLLLFSLEE 164 (202)
Q Consensus 92 W~~~~~~~~~~~~~~~-~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~-~~~~---~~~~~~~~~~~~-~~~~i~v~gG~~ 164 (202)
....-........... . ++.+++.|+ ..+.+.+||..+..-... .... ......-.+++. .+++.++.|+..
T Consensus 199 ~~~~~~~~~~v~~~~~~~~~~~~l~~~s-~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 199 CSLTLSIEDGVTTVAVSPGDGKYIAAGS-LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp EEEEEECSSCEEEEEECSTTCCEEEEEE-TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEcCCCcEEEEEECCCCCEEEEEc-CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 5433211111222222 2 566666665 677899999987764332 1110 111111112222 256777776542
Q ss_pred CCCceeEEEeCCC
Q 028925 165 EPSYSTLLYDPNA 177 (202)
Q Consensus 165 ~~~~~~~~yd~~~ 177 (202)
..+.+||..+
T Consensus 278 ---~~v~~wd~~~ 287 (393)
T 1erj_A 278 ---RSVKLWNLQN 287 (393)
T ss_dssp ---SEEEEEEC--
T ss_pred ---CEEEEEECCC
Confidence 2577777754
No 116
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.71 E-value=0.46 Score=38.14 Aligned_cols=136 Identities=13% Similarity=0.122 Sum_probs=75.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEc--CCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLI--ESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++++|++-|. ..|+||..+++.... +.++ . --++...+|++|++-|. ..+.||+.+.+
T Consensus 158 ~~~~yfFkG~--------~yw~yd~~~~~~~~~~w~gi~--~-iDAA~~~~g~~YfFkG~---------~y~rfd~~~~~ 217 (460)
T 1qhu_A 158 DEGILFFQGN--------RKWFWDLTTGTKKERSWPAVG--N-CTSALRWLGRYYCFQGN---------QFLRFNPVSGE 217 (460)
T ss_dssp SSEEEEEETT--------EEEEEETTTTEEEEECCTTSC--C-CSEEEEETTEEEEEETT---------EEEEECTTTCC
T ss_pred CCeEEEEecc--------cEEEEecccceeecccCCCCC--c-cchheeeCCceEEEECC---------EEEEEcCccCc
Confidence 6889998763 479999988765432 1222 2 22444568999999774 46777776543
Q ss_pred ------------EEeccCc---------------------cceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEE--
Q 028925 92 ------------WCQMKNG---------------------CVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKM-- 135 (202)
Q Consensus 92 ------------W~~~~~~---------------------~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-- 135 (202)
|..++.. .....++.. .++++|++- .+..+++|...+.+..
T Consensus 218 v~~gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFK---g~~yWR~~~~~~~~~p~~ 294 (460)
T 1qhu_A 218 VPPGYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFS---GSHYWRLDTNRDGWHSWP 294 (460)
T ss_dssp CCTTCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEE---TTEEEECTTGGGCCCCEE
T ss_pred ccCCCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEe---CCEEEEEecCCCCcCccc
Confidence 2111100 011223333 468899984 4567777765433322
Q ss_pred eccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCC
Q 028925 136 VPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
+...-+.....--++...++++|++-|. .+|+|+..+
T Consensus 295 Is~~WpglP~~IDAAf~~~~~~yfFkG~-----~yw~f~~~~ 331 (460)
T 1qhu_A 295 IAHQWPQGPSTVDAAFSWEDKLYLIQDT-----KVYVFLTKG 331 (460)
T ss_dssp GGGTCTTSCSSCSEEEEETTEEEEEETT-----EEEEEECSB
T ss_pred hhhhccCCCCCCcEEEEECCeEEEEeCC-----EEEEEeCCC
Confidence 1111111111122333457899999654 578887653
No 117
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.68 E-value=0.19 Score=38.46 Aligned_cols=142 Identities=9% Similarity=0.023 Sum_probs=68.9
Q ss_pred EEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE---CCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 16 KIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF---DGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 16 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~---~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
.+++.|+.+ ..+.+||..+.+-...-..........++.+ ++++++.|+.+ ..+.+||..+.+-
T Consensus 183 ~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-------g~v~~wd~~~~~~ 249 (344)
T 4gqb_B 183 SVFLSCSED------NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-------GTVSLVDTKSTSC 249 (344)
T ss_dssp TEEEEEETT------SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-------SEEEEEESCC--C
T ss_pred Cceeeeccc------cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC-------CcEEEEECCCCcE
Confidence 466666553 3578889887664332111111111122222 55677776543 4688899876542
Q ss_pred Ee-ccCccceeeeeEE-ECC-EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE--ECCeEEEEcccCCCC
Q 028925 93 CQ-MKNGCVMVTAHAV-VGK-KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI--LDGKLLLFSLEEEPS 167 (202)
Q Consensus 93 ~~-~~~~~~~~~~~~~-~~~-~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~~~ 167 (202)
.. +........+... .++ ++++.|+ ..+.+.+||..+.+-..+. .....-.+++. .+..+++.+|...
T Consensus 250 ~~~~~~h~~~v~~v~fsp~g~~~lasgs-~D~~i~vwd~~~~~~~~~~----~H~~~V~~v~~sp~~~~llas~s~D~-- 322 (344)
T 4gqb_B 250 VLSSAVHSQCVTGLVFSPHSVPFLASLS-EDCSLAVLDSSLSELFRSQ----AHRDFVRDATWSPLNHSLLTTVGWDH-- 322 (344)
T ss_dssp CEEEECCSSCEEEEEECSSSSCCEEEEE-TTSCEEEECTTCCEEEEEC----CCSSCEEEEEECSSSTTEEEEEETTS--
T ss_pred EEEEcCCCCCEEEEEEccCCCeEEEEEe-CCCeEEEEECCCCcEEEEc----CCCCCEEEEEEeCCCCeEEEEEcCCC--
Confidence 11 1111112222222 244 4454454 6788999999887644332 11111122222 2446777776432
Q ss_pred ceeEEEeCCCC
Q 028925 168 YSTLLYDPNAA 178 (202)
Q Consensus 168 ~~~~~yd~~~~ 178 (202)
.+..|+..++
T Consensus 323 -~v~~w~v~~~ 332 (344)
T 4gqb_B 323 -QVVHHVVPTE 332 (344)
T ss_dssp -CEEEEECCC-
T ss_pred -eEEEEECCCC
Confidence 5777777664
No 118
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=95.61 E-value=0.5 Score=35.63 Aligned_cols=137 Identities=7% Similarity=-0.076 Sum_probs=73.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
++.+|+++-.. ..+++||+.+++.+... ++. .....+..-+|++++... ..+++||+.+.+.+
T Consensus 60 ~~~l~~~d~~~------~~i~~~d~~~~~~~~~~-~~~-~v~~i~~~~dg~l~v~~~---------~gl~~~d~~~g~~~ 122 (326)
T 2ghs_A 60 SGTAWWFNILE------RELHELHLASGRKTVHA-LPF-MGSALAKISDSKQLIASD---------DGLFLRDTATGVLT 122 (326)
T ss_dssp TTEEEEEEGGG------TEEEEEETTTTEEEEEE-CSS-CEEEEEEEETTEEEEEET---------TEEEEEETTTCCEE
T ss_pred CCEEEEEECCC------CEEEEEECCCCcEEEEE-CCC-cceEEEEeCCCeEEEEEC---------CCEEEEECCCCcEE
Confidence 36788875331 46899999887665443 221 222222335888887641 24899999888877
Q ss_pred eccCc----cce--eeeeEEECCEEEEEeCC-----CCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CC-eEEEE
Q 028925 94 QMKNG----CVM--VTAHAVVGKKLFCMEWK-----NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DG-KLLLF 160 (202)
Q Consensus 94 ~~~~~----~~~--~~~~~~~~~~iyv~Gg~-----~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~-~i~v~ 160 (202)
.+... +.. .......++++|+.... ....++.|| +.+.+.+.... ....+++.. ++ .+|+.
T Consensus 123 ~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~----~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 123 LHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADI----SIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEE----SSEEEEEECTTSCEEEEE
T ss_pred EEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCC----cccCCeEEcCCCCEEEEE
Confidence 65421 111 11122236778875421 235788888 45555543110 111223332 44 56775
Q ss_pred cccCCCCceeEEEeCC
Q 028925 161 SLEEEPSYSTLLYDPN 176 (202)
Q Consensus 161 gG~~~~~~~~~~yd~~ 176 (202)
.. ....+++||.+
T Consensus 197 ~~---~~~~I~~~d~~ 209 (326)
T 2ghs_A 197 DT---KVNRLMRVPLD 209 (326)
T ss_dssp ET---TTCEEEEEEBC
T ss_pred EC---CCCEEEEEEcc
Confidence 42 23468888865
No 119
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.58 E-value=0.17 Score=38.45 Aligned_cols=110 Identities=13% Similarity=0.248 Sum_probs=56.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++.++.|+.+ ..+.+||..+++++.+..+.........+.+ ++++++.|+.+ ..+.+||..+..
T Consensus 72 ~g~~l~s~s~D------~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-------~~v~iwd~~~~~ 138 (345)
T 3fm0_A 72 CGNYLASASFD------ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-------KSVWVWEVDEED 138 (345)
T ss_dssp TSSEEEEEETT------SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------SCEEEEEECTTS
T ss_pred CCCEEEEEECC------CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-------CeEEEEECCCCC
Confidence 45555555543 2356677766666544333222222222222 66777666643 357888876542
Q ss_pred -EEecc---Cccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEec
Q 028925 92 -WCQMK---NGCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 92 -W~~~~---~~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~ 137 (202)
+..+. ......... ...++.+++.|+ ..+.+.+||..+..|..+.
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~i~~w~~~~~~~~~~~ 188 (345)
T 3fm0_A 139 EYECVSVLNSHTQDVKHVVWHPSQELLASAS-YDDTVKLYREEEDDWVCCA 188 (345)
T ss_dssp CEEEEEEECCCCSCEEEEEECSSSSCEEEEE-TTSCEEEEEEETTEEEEEE
T ss_pred CeEEEEEecCcCCCeEEEEECCCCCEEEEEe-CCCcEEEEEecCCCEEEEE
Confidence 22221 111111122 222556666654 5678999999888887554
No 120
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.57 E-value=0.28 Score=38.24 Aligned_cols=142 Identities=8% Similarity=0.046 Sum_probs=73.2
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++.+++.|+.+ ..+.+||..+.+-...-. ........+. -++++++.|+.+ ..+.+||..+.+
T Consensus 119 ~~~~l~s~s~D------g~i~vwd~~~~~~~~~l~--~h~~~V~~v~~~~~~~~l~sgs~D-------~~i~iwd~~~~~ 183 (410)
T 1vyh_C 119 VFSVMVSASED------ATIKVWDYETGDFERTLK--GHTDSVQDISFDHSGKLLASCSAD-------MTIKLWDFQGFE 183 (410)
T ss_dssp SSSEEEEEESS------SCEEEEETTTCCCCEEEC--CCSSCEEEEEECTTSSEEEEEETT-------SCCCEEETTSSC
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEe--ccCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEeCCCCc
Confidence 45667777654 357888988765432211 1111112222 367777776643 357788887654
Q ss_pred EEec-cCccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE--ECCeEEEEcccCCCC
Q 028925 92 WCQM-KNGCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI--LDGKLLLFSLEEEPS 167 (202)
Q Consensus 92 W~~~-~~~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~~~ 167 (202)
-... ........+... .++..++.|+ ..+.+.+||..+..-...-.. . ......+. .++++++.|+..
T Consensus 184 ~~~~~~~h~~~V~~v~~~p~~~~l~s~s-~D~~i~~wd~~~~~~~~~~~~--h--~~~v~~~~~~~~g~~l~s~s~D--- 255 (410)
T 1vyh_C 184 CIRTMHGHDHNVSSVSIMPNGDHIVSAS-RDKTIKMWEVQTGYCVKTFTG--H--REWVRMVRPNQDGTLIASCSND--- 255 (410)
T ss_dssp EEECCCCCSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTCCEEEEEEC--C--SSCEEEEEECTTSSEEEEEETT---
T ss_pred eeEEEcCCCCCEEEEEEeCCCCEEEEEe-CCCeEEEEECCCCcEEEEEeC--C--CccEEEEEECCCCCEEEEEcCC---
Confidence 3222 111112222222 2555555554 678899999987764332111 1 11122222 256777776542
Q ss_pred ceeEEEeCCCC
Q 028925 168 YSTLLYDPNAA 178 (202)
Q Consensus 168 ~~~~~yd~~~~ 178 (202)
..+.+||..+.
T Consensus 256 ~~v~vwd~~~~ 266 (410)
T 1vyh_C 256 QTVRVWVVATK 266 (410)
T ss_dssp SCEEEEETTTC
T ss_pred CeEEEEECCCC
Confidence 25777777664
No 121
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.56 E-value=0.56 Score=35.79 Aligned_cols=143 Identities=13% Similarity=0.069 Sum_probs=73.7
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCc--eeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPR--WGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r--~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++++.|+.+ ..+.+||+.++............ ....+..-++++++.|+.+ ..+.+||.....-
T Consensus 131 ~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~ 197 (383)
T 3ei3_B 131 TNQLFVSSIR------GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-------GRLLLLGLDGHEI 197 (383)
T ss_dssp EEEEEEEETT------TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT-------SEEEEEETTSCEE
T ss_pred CCEEEEEeCC------CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC-------CCEEEEECCCCEE
Confidence 4666666543 35778888876655554322111 1112222366666666543 4688999865544
Q ss_pred EeccCccceeeeeEE-ECCE-EEEEeCCCCCeEEEEeCCC----CcEEEeccCCCCCCCCCeeEEE-E-CCeEEEEcccC
Q 028925 93 CQMKNGCVMVTAHAV-VGKK-LFCMEWKNQRKLTIFDPED----NSWKMVPVPLTGSSSIGFRFGI-L-DGKLLLFSLEE 164 (202)
Q Consensus 93 ~~~~~~~~~~~~~~~-~~~~-iyv~Gg~~~~~~~~yd~~~----~~W~~~~~~~~~~~~~~~~~~~-~-~~~i~v~gG~~ 164 (202)
..+........+... .++. +++.|+ ..+.+.+||..+ ....... . . ...-.+++. . +++.++.++..
T Consensus 198 ~~~~~h~~~v~~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~-~--~-~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 198 FKEKLHKAKVTHAEFNPRCDWLMATSS-VDATVKLWDLRNIKDKNSYIAEM-P--H-EKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp EEEECSSSCEEEEEECSSCTTEEEEEE-TTSEEEEEEGGGCCSTTCEEEEE-E--C-SSCEEEEEECTTTSCEEEEEESS
T ss_pred EEeccCCCcEEEEEECCCCCCEEEEEe-CCCEEEEEeCCCCCcccceEEEe-c--C-CCceEEEEEcCCCCCEEEEEcCC
Confidence 444322222222222 2444 666654 577899999876 3333321 1 1 111122222 2 56677766542
Q ss_pred CCCceeEEEeCCCC
Q 028925 165 EPSYSTLLYDPNAA 178 (202)
Q Consensus 165 ~~~~~~~~yd~~~~ 178 (202)
..+.+||..+.
T Consensus 273 ---~~i~iwd~~~~ 283 (383)
T 3ei3_B 273 ---NEIRVYSSYDW 283 (383)
T ss_dssp ---SEEEEEETTBT
T ss_pred ---CcEEEEECCCC
Confidence 36788887654
No 122
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.54 E-value=0.18 Score=37.80 Aligned_cols=109 Identities=14% Similarity=0.207 Sum_probs=58.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE----CCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF----DGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~----~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++.++.|+.+ ..+.+||+.+++...+..+.........+.+ ++++++.|+.+ ..+.+||..+
T Consensus 24 ~g~~lasgs~D------~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-------~~v~iWd~~~ 90 (316)
T 3bg1_A 24 YGTRLATCSSD------RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-------RKVIIWREEN 90 (316)
T ss_dssp GGCEEEEEETT------TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-------SCEEEECCSS
T ss_pred CCCEEEEEeCC------CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-------CEEEEEECCC
Confidence 56777777654 3577788776654333222211111222232 25666666543 4688999888
Q ss_pred CeEEecc---CccceeeeeEEE-C--CEEEEEeCCCCCeEEEEeCCCC-cEEEe
Q 028925 90 HTWCQMK---NGCVMVTAHAVV-G--KKLFCMEWKNQRKLTIFDPEDN-SWKMV 136 (202)
Q Consensus 90 ~~W~~~~---~~~~~~~~~~~~-~--~~iyv~Gg~~~~~~~~yd~~~~-~W~~~ 136 (202)
.+|.... .......+.... + +.+++.|+ ..+.+.+||..+. .|...
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs-~D~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGS-SDGAISLLTYTGEGQWEVK 143 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEEC-SSSCEEEEEECSSSCEEEC
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEc-CCCCEEEEecCCCCCccee
Confidence 7665433 111111222222 2 45566654 5678888888765 57543
No 123
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=95.52 E-value=0.41 Score=34.03 Aligned_cols=143 Identities=10% Similarity=0.009 Sum_probs=76.5
Q ss_pred EEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEE--c----CCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcceE
Q 028925 10 CAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNL--I----ESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKFV 82 (202)
Q Consensus 10 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~--~----~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~ 82 (202)
++..++++|++=|. .+|+++.....+.. + +.||.. ..++... .++++|++-|. .+
T Consensus 29 i~~~~g~~y~Fkg~--------~~wr~~~~~~~~~p~~I~~~wp~Lp~~-iDAa~~~~~~~~iyfFkG~---------~~ 90 (207)
T 1pex_A 29 ITSLRGETMIFKDR--------FFWRLHPQQVDAELFLTKSFWPELPNR-IDAAYEHPSHDLIFIFRGR---------KF 90 (207)
T ss_dssp EEEETTEEEEEETT--------EEEEECSSSSCCEEEEHHHHCTTSCSS-CCEEEEETTTTEEEEEETT---------EE
T ss_pred EEeCCCcEEEEECC--------EEEEEeCCCcCCCceehhHhccCCCCC-ccEEEEeccCCcEEEEccC---------EE
Confidence 34579999999663 47888876544422 1 234432 2222222 26899999663 46
Q ss_pred EEEeCCCCeE---EeccC--cc---ceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEE-----eccCCCCCCCCC
Q 028925 83 DVYNPERHTW---CQMKN--GC---VMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKM-----VPVPLTGSSSIG 147 (202)
Q Consensus 83 ~~yd~~~~~W---~~~~~--~~---~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~-----~~~~~~~~~~~~ 147 (202)
++|+..+-.- ..+.. .+ ....++... ++++|++- .+..+.||..+++=.. +....+.....-
T Consensus 91 w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFk---G~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~i 167 (207)
T 1pex_A 91 WALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFS---GNQVWRYDDTNHIMDKDYPRLIEEDFPGIGDKV 167 (207)
T ss_dssp EEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEE---TTEEEEEETTTTEECSSCCCBHHHHSTTSCSCC
T ss_pred EEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEe---CCEEEEEeCcCccccCCCCccHHHcCCCCCCCc
Confidence 7776322110 01110 11 112333333 47999995 4578999987654221 110111111112
Q ss_pred eeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 148 FRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 148 ~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.++...++++|.+-|. ..++||..++
T Consensus 168 DaAf~~~g~~YfFkg~-----~y~rf~~~~~ 193 (207)
T 1pex_A 168 DAVYEKNGYIYFFNGP-----IQFEYSIWSN 193 (207)
T ss_dssp SEEEEETTEEEEEETT-----EEEEEETTTT
T ss_pred cEEEEcCCcEEEEECC-----EEEEEeCCcc
Confidence 2333569999999754 5788998775
No 124
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.45 E-value=0.11 Score=39.76 Aligned_cols=131 Identities=9% Similarity=-0.046 Sum_probs=65.0
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeEEE---CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEe-ccCccceeeeeEE
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFACSF---DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQ-MKNGCVMVTAHAV 107 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~---~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~ 107 (202)
.+.+||+.+.+-...-...........+.+ ++++++.|+.+ ..+.+||..+.+-.. +........+...
T Consensus 205 ~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d-------~~i~~wd~~~~~~~~~~~~~~~~v~~l~~ 277 (357)
T 4g56_B 205 RILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET-------GNVSLVNIKNPDSAQTSAVHSQNITGLAY 277 (357)
T ss_dssp CEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS-------SCEEEEESSCGGGCEEECCCSSCEEEEEE
T ss_pred ceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc-------cceeEEECCCCcEeEEEeccceeEEEEEE
Confidence 477788876553322222222222223333 35677666533 358888887653111 1111111122222
Q ss_pred -ECC-EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE--ECCeEEEEcccCCCCceeEEEeCCC
Q 028925 108 -VGK-KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI--LDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 108 -~~~-~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
.++ ++++.|+ ....+.+||.++.+-...- .. ...-.+++. .++++++.+|.. ..+.+||..+
T Consensus 278 sp~~~~~lasgs-~D~~i~iwd~~~~~~~~~~---~H-~~~V~~vafsP~d~~~l~s~s~D---g~v~iW~~~~ 343 (357)
T 4g56_B 278 SYHSSPFLASIS-EDCTVAVLDADFSEVFRDL---SH-RDFVTGVAWSPLDHSKFTTVGWD---HKVLHHHLPS 343 (357)
T ss_dssp CSSSSCCEEEEE-TTSCEEEECTTSCEEEEEC---CC-SSCEEEEEECSSSTTEEEEEETT---SCEEEEECC-
T ss_pred cCCCCCEEEEEe-CCCEEEEEECCCCcEeEEC---CC-CCCEEEEEEeCCCCCEEEEEcCC---CeEEEEECCC
Confidence 244 4544453 5678999999877644331 11 111122333 367788877653 2578888754
No 125
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.41 E-value=0.63 Score=35.45 Aligned_cols=135 Identities=14% Similarity=0.114 Sum_probs=68.4
Q ss_pred eeeEEEeCCCCCeEEc-CCCCCCceeeeeEEE-CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-CccceeeeeEE
Q 028925 31 SSAEVYDPDTDKWNLI-ESLRRPRWGCFACSF-DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-NGCVMVTAHAV 107 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~-~~~~~~r~~~~~~~~-~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~ 107 (202)
..+.+||+.+.+-... ............... ++++++.|+.+ ..+.+||..+.+....- .......+...
T Consensus 176 ~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D-------g~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 248 (354)
T 2pbi_B 176 GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD-------KKAMVWDMRSGQCVQAFETHESDVNSVRY 248 (354)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT-------SCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC-------CeEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 3578889887764322 111111111111111 35667666643 46889998877643322 11111222222
Q ss_pred -ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE--ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 108 -VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI--LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 108 -~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.++..++.|+ ....+.+||..+..-...-.. .........+. .++++++.|+.. ..+.+||..++
T Consensus 249 ~p~~~~l~s~s-~D~~v~lwd~~~~~~~~~~~~--~~~~~~~~~~~~s~~g~~l~~g~~d---~~i~vwd~~~~ 316 (354)
T 2pbi_B 249 YPSGDAFASGS-DDATCRLYDLRADREVAIYSK--ESIIFGASSVDFSLSGRLLFAGYND---YTINVWDVLKG 316 (354)
T ss_dssp CTTSSEEEEEE-TTSCEEEEETTTTEEEEEECC--TTCCSCEEEEEECTTSSEEEEEETT---SCEEEEETTTC
T ss_pred eCCCCEEEEEe-CCCeEEEEECCCCcEEEEEcC--CCcccceeEEEEeCCCCEEEEEECC---CcEEEEECCCC
Confidence 2556666665 578899999887653332111 11122222222 267777777532 36888888654
No 126
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.38 E-value=1.1 Score=38.19 Aligned_cols=143 Identities=12% Similarity=0.143 Sum_probs=83.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCC------CCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESL------RRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~------~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
++.||+... .-+++||+.+++|+..... +..........-+|.||+... ..+.+||+
T Consensus 462 ~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~---------~Gl~~~~~ 524 (795)
T 4a2l_A 462 EGNLWLGTL--------SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE---------EGLSVFKQ 524 (795)
T ss_dssp SSCEEEEES--------SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES---------SCEEEEEE
T ss_pred CCCEEEEec--------CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC---------CceEEEeC
Confidence 456666532 2478999999999877532 111111111223678887542 24888999
Q ss_pred CCCeEEeccC------ccc-eeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccC-CCCCCCCCeeEEEE-CCeE
Q 028925 88 ERHTWCQMKN------GCV-MVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVP-LTGSSSIGFRFGIL-DGKL 157 (202)
Q Consensus 88 ~~~~W~~~~~------~~~-~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~-~~~~~~~~~~~~~~-~~~i 157 (202)
.++++ .... .+. ...+... .++.|++.. ...+.+||+++++++..... ..+ ...-.+++.. +|+|
T Consensus 525 ~~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT---~~Gl~~~d~~~~~~~~~~~~~gl~-~~~i~~i~~d~~g~l 599 (795)
T 4a2l_A 525 EGLDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGT---REGFYCFNEKDKQIKRYNTTNGLP-NNVVYGILEDSFGRL 599 (795)
T ss_dssp ETTEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEE---SSCEEEEETTTTEEEEECGGGTCS-CSCEEEEEECTTSCE
T ss_pred CCCeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEe---CCCceeECCCCCcEEEeCCCCCCc-hhheEEEEECCCCCE
Confidence 88887 4321 111 1112222 257788754 23799999999998886521 111 1222233332 5778
Q ss_pred EEEcccCCCCceeEEEeCCCCCCCcceee
Q 028925 158 LLFSLEEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 158 ~v~gG~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
++-+ ...+.+||++++ +++..
T Consensus 600 Wi~t-----~~Gl~~~~~~~~---~~~~~ 620 (795)
T 4a2l_A 600 WLST-----NRGISCFNPETE---KFRNF 620 (795)
T ss_dssp EEEE-----TTEEEEEETTTT---EEEEE
T ss_pred EEEc-----CCceEEEcCCCC---cEEEc
Confidence 8765 235888999988 77765
No 127
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.36 E-value=0.87 Score=38.57 Aligned_cols=144 Identities=13% Similarity=0.117 Sum_probs=79.8
Q ss_pred eeeeEEEeCCCC--C-eEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCC--CeEEeccCccce-ee
Q 028925 30 LSSAEVYDPDTD--K-WNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPER--HTWCQMKNGCVM-VT 103 (202)
Q Consensus 30 ~~~~~~yd~~t~--~-W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~--~~W~~~~~~~~~-~~ 103 (202)
..+++++|+.+. + |+.+.+........ +..-++.||+...... ....++++|..+ .+|+.+.+.... ..
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~l~~~~~~~l~ 367 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGA----PLKKIVRVDLSGSTPRFDTVVPESKDNLE 367 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTC----TTCEEEEEECSSSSCEEEEEECCCSSEEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCC----CCCEEEEEeCCCCccccEEEecCCCCeEE
Confidence 457899998877 6 87775433333222 2235667777653321 245789999887 578887643322 22
Q ss_pred eeEEECCEEEEEeC-CCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE--ECC-eEEEEc-ccCCCCceeEEEeCCCC
Q 028925 104 AHAVVGKKLFCMEW-KNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI--LDG-KLLLFS-LEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 104 ~~~~~~~~iyv~Gg-~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~-~i~v~g-G~~~~~~~~~~yd~~~~ 178 (202)
.....++.+++... .....++.+|.+...-+.+..+ . ........ .++ .|++.. .... ...++.||..++
T Consensus 368 ~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~--~--~~~v~~~~~s~d~~~l~~~~ss~~~-P~~i~~~d~~tg 442 (741)
T 1yr2_A 368 SVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVSLP--G--IGSASGLSGRPGDRHAYLSFSSFTQ-PATVLALDPATA 442 (741)
T ss_dssp EEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECBCS--S--SCEEEEEECCBTCSCEEEEEEETTE-EEEEEEEETTTT
T ss_pred EEEEECCEEEEEEEECCEEEEEEEeCCCCceeeccCC--C--CeEEEEeecCCCCCEEEEEEcCCCC-CCEEEEEECCCC
Confidence 33444777777653 2245678888765544444321 1 11111111 233 455432 2222 237899999887
Q ss_pred CCCcceee
Q 028925 179 SGSEWQTS 186 (202)
Q Consensus 179 ~~~~W~~~ 186 (202)
+.+.+
T Consensus 443 ---~~~~l 447 (741)
T 1yr2_A 443 ---KTTPW 447 (741)
T ss_dssp ---EEEEC
T ss_pred ---cEEEE
Confidence 65555
No 128
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=95.36 E-value=0.56 Score=34.62 Aligned_cols=104 Identities=13% Similarity=0.235 Sum_probs=55.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE----CCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF----DGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~----~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++.++.|+.+ ..+.+||..+.+.+.+..+.........+.+ ++++++.|+.+ ..+.+||..+
T Consensus 20 ~g~~las~s~D------~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-------~~v~iWd~~~ 86 (297)
T 2pm7_B 20 YGKRMATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVMIWKEEN 86 (297)
T ss_dssp TSSEEEEEETT------SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-------TEEEEEEBSS
T ss_pred CCCEEEEEeCC------CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-------CEEEEEEcCC
Confidence 57777777754 3477788765443322222211111122232 25666666543 4688999888
Q ss_pred CeEEeccC---ccceeeeeEEE-C--CEEEEEeCCCCCeEEEEeCCCC
Q 028925 90 HTWCQMKN---GCVMVTAHAVV-G--KKLFCMEWKNQRKLTIFDPEDN 131 (202)
Q Consensus 90 ~~W~~~~~---~~~~~~~~~~~-~--~~iyv~Gg~~~~~~~~yd~~~~ 131 (202)
.+|..+.. ......+.... + +.+++.|+ ..+.+.+||..+.
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s-~d~~v~~wd~~~~ 133 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVAS-SDGKVSVVEFKEN 133 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEEBCSS
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEE-CCCcEEEEEecCC
Confidence 77655431 11111222222 2 45555554 5678888988665
No 129
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.35 E-value=0.47 Score=35.47 Aligned_cols=115 Identities=10% Similarity=0.048 Sum_probs=65.7
Q ss_pred ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-CccceeeeeEE-ECCEEEEEeCCC---CCeEEEEeCCCCcEEE
Q 028925 61 FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-NGCVMVTAHAV-VGKKLFCMEWKN---QRKLTIFDPEDNSWKM 135 (202)
Q Consensus 61 ~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~-~~~~iyv~Gg~~---~~~~~~yd~~~~~W~~ 135 (202)
-+++||+.+.. ...+.+||+.+.+...+. .......+... .++++|+..... ...+++||+++...+.
T Consensus 54 ~~g~l~~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 54 RQGQLFLLDVF-------EGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp TTSCEEEEETT-------TCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred CCCCEEEEECC-------CCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 36788887643 246999999988877654 22222223332 367888875321 2589999999887664
Q ss_pred eccCCCCCCCCCeeEEE-ECCeEEEEcccC---CCCceeEEEeCCCCCCCcceee
Q 028925 136 VPVPLTGSSSIGFRFGI-LDGKLLLFSLEE---EPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 136 ~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~---~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
+-..... ...-..++. -++++|+..... .....++.||++++ +.+.+
T Consensus 127 ~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~---~~~~~ 177 (333)
T 2dg1_A 127 IIEDLST-AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR---TVTPI 177 (333)
T ss_dssp EECSSSS-CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC---CEEEE
T ss_pred EEccCcc-CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCC---EEEEe
Confidence 3211111 121222232 367888854321 11246888998876 55544
No 130
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.33 E-value=0.79 Score=37.93 Aligned_cols=150 Identities=11% Similarity=-0.034 Sum_probs=80.9
Q ss_pred eeeeEEEeCCC------CCeEEcC-CCCCCceeeee-EEECCEEEEEcCccCC-CCCCcceEEEEeCC-CC---eEEecc
Q 028925 30 LSSAEVYDPDT------DKWNLIE-SLRRPRWGCFA-CSFDGKLYVMGGRSSF-TIGNSKFVDVYNPE-RH---TWCQMK 96 (202)
Q Consensus 30 ~~~~~~yd~~t------~~W~~~~-~~~~~r~~~~~-~~~~~~iy~~gG~~~~-~~~~~~~~~~yd~~-~~---~W~~~~ 96 (202)
..+++++|+.+ .+-+.+. .-. ...... ..-+|+.+++...... ..-...+++++|.. +. +...+.
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~ 237 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLL 237 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCceeEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeC
Confidence 46899999988 6666554 211 111111 2236765544433221 11123579999988 56 444444
Q ss_pred Cc-cceeeee-EEECCEEEEEeCC-CCCeEEEEeCCCCcEEEeccCCC----CCCCC-CeeEEEE-CCeEEEEcccCCCC
Q 028925 97 NG-CVMVTAH-AVVGKKLFCMEWK-NQRKLTIFDPEDNSWKMVPVPLT----GSSSI-GFRFGIL-DGKLLLFSLEEEPS 167 (202)
Q Consensus 97 ~~-~~~~~~~-~~~~~~iyv~Gg~-~~~~~~~yd~~~~~W~~~~~~~~----~~~~~-~~~~~~~-~~~i~v~gG~~~~~ 167 (202)
.. ....... ...++++|+.+.. ....++.+|+++.+++.+..... +.... ...++.. ++++++.+.. ..
T Consensus 238 ~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--~~ 315 (662)
T 3azo_A 238 GGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK--GA 315 (662)
T ss_dssp EETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--SS
T ss_pred CCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc--Cc
Confidence 22 1122222 2336777766532 23379999998888888742111 00010 1223343 6787777654 44
Q ss_pred ceeEEEeCCCCCCCcceee
Q 028925 168 YSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 168 ~~~~~yd~~~~~~~~W~~~ 186 (202)
..++.+|.+++ ..+.+
T Consensus 316 ~~l~~~d~~~~---~~~~l 331 (662)
T 3azo_A 316 AVLGILDPESG---ELVDA 331 (662)
T ss_dssp CEEEEEETTTT---EEEEC
T ss_pred cEEEEEECCCC---cEEEe
Confidence 57888898876 66665
No 131
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.32 E-value=0.45 Score=35.67 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=52.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++++++.|+.+ ..+.+||..+.+-... +...........+ +++.++.++.+ ..+.+||..+.+
T Consensus 43 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~~ 107 (369)
T 3zwl_B 43 EGDLLFSCSKD------SSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSAD-------YSIKLWDVSNGQ 107 (369)
T ss_dssp TSCEEEEEESS------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-------TEEEEEETTTCC
T ss_pred CCCEEEEEeCC------CEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCc
Confidence 56666776643 3578889887654322 1111111222222 56666666542 468899988775
Q ss_pred EEeccCccceeeee-EEECCEEEEEeCCC----CCeEEEEeCCCC
Q 028925 92 WCQMKNGCVMVTAH-AVVGKKLFCMEWKN----QRKLTIFDPEDN 131 (202)
Q Consensus 92 W~~~~~~~~~~~~~-~~~~~~iyv~Gg~~----~~~~~~yd~~~~ 131 (202)
-...-......... ...++..++.++.. ...+.+||..+.
T Consensus 108 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 108 CVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred EEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 44332222112222 22245555554321 267888876544
No 132
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.30 E-value=0.6 Score=34.95 Aligned_cols=144 Identities=10% Similarity=-0.035 Sum_probs=69.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCC-CeE-EcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTD-KWN-LIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~-~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++.++.|+.+ ..+.+||+.++ +-. .......+ .......-++++++.++.+ ..+.+||..+.+
T Consensus 186 ~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~~ 251 (369)
T 3zwl_B 186 KGKYIIAGHKD------GKISKYDVSNNYEYVDSIDLHEKS-ISDMQFSPDLTYFITSSRD-------TNSFLVDVSTLQ 251 (369)
T ss_dssp GGCEEEEEETT------SEEEEEETTTTTEEEEEEECCSSC-EEEEEECTTSSEEEEEETT-------SEEEEEETTTCC
T ss_pred CCCEEEEEcCC------CEEEEEECCCCcEeEEEEecCCCc-eeEEEECCCCCEEEEecCC-------ceEEEEECCCCc
Confidence 45566666543 35889998862 222 12111111 1111112266666666532 468899988765
Q ss_pred EEeccCcccee-eeeEEECCEEEEEeCCCC-------------CeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE--CC
Q 028925 92 WCQMKNGCVMV-TAHAVVGKKLFCMEWKNQ-------------RKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL--DG 155 (202)
Q Consensus 92 W~~~~~~~~~~-~~~~~~~~~iyv~Gg~~~-------------~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~ 155 (202)
-...-...... ......++..+++++... ..+..||..+.+-...-.. . ......+.+ ++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~--~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 252 VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG--H--FGPLNTVAISPQG 327 (369)
T ss_dssp EEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC--C--SSCEEEEEECTTS
T ss_pred eeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec--c--cCcEEEEEECCCC
Confidence 43322211111 112223445555543221 1678888776653332111 1 112222222 67
Q ss_pred eEEEEcccCCCCceeEEEeCCCC
Q 028925 156 KLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 156 ~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
++++.++.. ..+.+||.+++
T Consensus 328 ~~l~s~~~d---g~v~iw~~~~~ 347 (369)
T 3zwl_B 328 TSYASGGED---GFIRLHHFEKS 347 (369)
T ss_dssp SEEEEEETT---SEEEEEEECHH
T ss_pred CEEEEEcCC---CeEEEEECccc
Confidence 777777543 26778887664
No 133
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.28 E-value=1 Score=37.19 Aligned_cols=113 Identities=19% Similarity=0.219 Sum_probs=67.7
Q ss_pred EEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCCCC---c---eeeeeEEECCEEEEEcCccCCCCCCcc
Q 028925 9 ACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLRRP---R---WGCFACSFDGKLYVMGGRSSFTIGNSK 80 (202)
Q Consensus 9 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~---r---~~~~~~~~~~~iy~~gG~~~~~~~~~~ 80 (202)
+-++.+++||+....+ .++.+|.+|.+ |+.-...+.. . .....+..+++||+... ..
T Consensus 63 ~P~v~~g~vyv~~~~~-------~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~--------dg 127 (582)
T 1flg_A 63 QAIVSDGVIYVTASYS-------RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL--------DA 127 (582)
T ss_dssp CCEEETTEEEEEETTT-------EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET--------TT
T ss_pred ccEEECCEEEEEcCCC-------CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC--------CC
Confidence 4457799999986531 38889988766 8765432211 1 11234567899988532 24
Q ss_pred eEEEEeCCCC--eEEeccCcc----ceeeeeEEECC------EEEEEeC----CCCCeEEEEeCCCCc--EEEe
Q 028925 81 FVDVYNPERH--TWCQMKNGC----VMVTAHAVVGK------KLFCMEW----KNQRKLTIFDPEDNS--WKMV 136 (202)
Q Consensus 81 ~~~~yd~~~~--~W~~~~~~~----~~~~~~~~~~~------~iyv~Gg----~~~~~~~~yd~~~~~--W~~~ 136 (202)
.+..+|..+. .|+.-.... ....+..+.++ .||+... .....++.||.++.+ |+.-
T Consensus 128 ~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 128 SVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp EEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred EEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 6899998776 487643211 11123345566 6665321 125689999998765 8753
No 134
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.27 E-value=0.7 Score=35.17 Aligned_cols=102 Identities=13% Similarity=0.237 Sum_probs=54.7
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++++.|+.+ ..+.+||+.+.+....-.... .....+.+ ++..++.|+.+ ..+.+||..+.+-
T Consensus 210 g~~l~sgs~D------g~v~~wd~~~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~D-------~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 210 GNTFVSGGCD------KKAMVWDMRSGQCVQAFETHE--SDVNSVRYYPSGDAFASGSDD-------ATCRLYDLRADRE 274 (354)
T ss_dssp CCEEEEEETT------SCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETT-------SCEEEEETTTTEE
T ss_pred CCEEEEEeCC------CeEEEEECCCCcEEEEecCCC--CCeEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCcE
Confidence 4566666543 357888988776533211111 11222222 56666666643 4588899877643
Q ss_pred Eecc-Ccc-c-eeeee-EEECCEEEEEeCCCCCeEEEEeCCCCc
Q 028925 93 CQMK-NGC-V-MVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 93 ~~~~-~~~-~-~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
...- ... . ..... ...++.+++.|+ ....+.+||..+.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 275 VAIYSKESIIFGASSVDFSLSGRLLFAGY-NDYTINVWDVLKGS 317 (354)
T ss_dssp EEEECCTTCCSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCS
T ss_pred EEEEcCCCcccceeEEEEeCCCCEEEEEE-CCCcEEEEECCCCc
Confidence 2221 111 1 11122 223566666665 67789999986654
No 135
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.27 E-value=0.3 Score=41.58 Aligned_cols=104 Identities=14% Similarity=0.249 Sum_probs=62.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--C--CEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--D--GKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++.++.|+.+ ..+.+||..++++..+..+...........+ + +.+++.|+.+ ..+.+||..+
T Consensus 20 dg~~latg~~d------g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-------g~I~vwd~~~ 86 (753)
T 3jro_A 20 YGKRLATCSSD------KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVLIWKEEN 86 (753)
T ss_dssp SSCCEEEEETT------TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-------SCEEEEEEET
T ss_pred CCCeEEEEECC------CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-------CeEEEEECCC
Confidence 56666776653 3578888877777666544333323333333 3 6677776643 4688999888
Q ss_pred CeEEeccC---ccceeeeeEEE-C--CEEEEEeCCCCCeEEEEeCCCC
Q 028925 90 HTWCQMKN---GCVMVTAHAVV-G--KKLFCMEWKNQRKLTIFDPEDN 131 (202)
Q Consensus 90 ~~W~~~~~---~~~~~~~~~~~-~--~~iyv~Gg~~~~~~~~yd~~~~ 131 (202)
++|..+.. ......+.... + +.+++.|+ ..+.+.+||..+.
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs-~dg~I~vwdl~~~ 133 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVAS-SDGKVSVVEFKEN 133 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSEEEEEECCSS
T ss_pred CcccccccccCCCCCeEEEEECCCCCCCEEEEEe-CCCcEEEEEeecC
Confidence 88766551 11222222222 3 56666665 6788999998766
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.27 E-value=0.45 Score=35.35 Aligned_cols=144 Identities=16% Similarity=0.063 Sum_probs=65.1
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCC-CCCeEEcCCCCCCceeeeeE-EECCE-EEEEcCccCCCCCCcceEEEEeCC--C
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPD-TDKWNLIESLRRPRWGCFAC-SFDGK-LYVMGGRSSFTIGNSKFVDVYNPE--R 89 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~~~~~r~~~~~~-~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~--~ 89 (202)
..+|+.++.+ ..+.+||+. +.+.+.+...+....-..++ .-+++ ||+.+. . ...+.+|+.. +
T Consensus 5 ~~l~~~~~~~------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~-~------~~~v~~~~~~~~~ 71 (343)
T 1ri6_A 5 QTVYIASPES------QQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR-P------EFRVLAYRIAPDD 71 (343)
T ss_dssp EEEEEEEGGG------TEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEET-T------TTEEEEEEECTTT
T ss_pred EEEEEeCCCC------CeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeec-C------CCeEEEEEecCCC
Confidence 4566664432 346667663 44554432222111111122 23555 555433 2 1357777665 6
Q ss_pred CeEEecc--CccceeeeeE-EECCE-EEEEeCCCCCeEEEEeCCCCc-EEEeccCCCCCCCCCeeEEE-ECC-eEEEEcc
Q 028925 90 HTWCQMK--NGCVMVTAHA-VVGKK-LFCMEWKNQRKLTIFDPEDNS-WKMVPVPLTGSSSIGFRFGI-LDG-KLLLFSL 162 (202)
Q Consensus 90 ~~W~~~~--~~~~~~~~~~-~~~~~-iyv~Gg~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~-~~~-~i~v~gG 162 (202)
.++..+. +......... ..+++ ||+.+. ....+.+||..... ...+...... .....++. -++ .||+.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~ 148 (343)
T 1ri6_A 72 GALTFAAESALPGSLTHISTDHQGQFVFVGSY-NAGNVSVTRLEDGLPVGVVDVVEGL--DGCHSANISPDNRTLWVPAL 148 (343)
T ss_dssp CCEEEEEEEECSSCCSEEEECTTSSEEEEEET-TTTEEEEEEEETTEEEEEEEEECCC--TTBCCCEECTTSSEEEEEEG
T ss_pred CceeeccccccCCCCcEEEEcCCCCEEEEEec-CCCeEEEEECCCCccccccccccCC--CCceEEEECCCCCEEEEecC
Confidence 6776554 1111112222 22444 666553 46678888884222 2222211111 11122222 234 5666542
Q ss_pred cCCCCceeEEEeCCC
Q 028925 163 EEEPSYSTLLYDPNA 177 (202)
Q Consensus 163 ~~~~~~~~~~yd~~~ 177 (202)
. ...+.+||..+
T Consensus 149 ~---~~~v~~~d~~~ 160 (343)
T 1ri6_A 149 K---QDRICLFTVSD 160 (343)
T ss_dssp G---GTEEEEEEECT
T ss_pred C---CCEEEEEEecC
Confidence 2 23688888876
No 137
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.26 E-value=0.71 Score=38.75 Aligned_cols=146 Identities=10% Similarity=0.109 Sum_probs=77.3
Q ss_pred eeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe---EEeccCcc--ceeee
Q 028925 30 LSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT---WCQMKNGC--VMVTA 104 (202)
Q Consensus 30 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~---W~~~~~~~--~~~~~ 104 (202)
...++.+|..+.+++.+.......... +..+|.||+.+... .....++++|..+.+ |+.+.+.. .....
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~--~~~~g~l~~~s~~~----~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~ 324 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEV--HAWKDRFYVLTDEG----APRQRVFEVDPAKPARASWKEIVPEDSSASLLS 324 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEE--EEETTEEEEEECTT----CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEE--EecCCcEEEEECCC----CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEE
Confidence 457888888777888775433222222 23567766554321 124578999987654 77776332 22233
Q ss_pred eEEECCEEEEEeC-CCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECC-eEEEEcccCCCCceeEEEeCCCCCCCc
Q 028925 105 HAVVGKKLFCMEW-KNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDG-KLLLFSLEEEPSYSTLLYDPNAASGSE 182 (202)
Q Consensus 105 ~~~~~~~iyv~Gg-~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~-~i~v~gG~~~~~~~~~~yd~~~~~~~~ 182 (202)
....++.+++... .....++.+|.....-+.+..+... .-...+. ..++ .+++..........++.||.+++ +
T Consensus 325 ~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~-~v~~~~~-s~d~~~l~~~~ss~~~P~~v~~~d~~~g---~ 399 (695)
T 2bkl_A 325 VSIVGGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVG-AASNLMG-LEDLDDAYYVFTSFTTPRQIYKTSVSTG---K 399 (695)
T ss_dssp EEEETTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSS-EECCCBS-CTTCSEEEEEEEETTEEEEEEEEETTTC---C
T ss_pred EEEECCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCe-EEEEeec-CCCCCEEEEEEcCCCCCCEEEEEECCCC---c
Confidence 3445888877753 2245678888765544444322111 0011111 1234 44443321122237889999887 6
Q ss_pred ceee
Q 028925 183 WQTS 186 (202)
Q Consensus 183 W~~~ 186 (202)
.+.+
T Consensus 400 ~~~l 403 (695)
T 2bkl_A 400 SELW 403 (695)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6555
No 138
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.24 E-value=0.14 Score=39.25 Aligned_cols=144 Identities=11% Similarity=0.101 Sum_probs=69.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECC-EEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDG-KLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~-~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++.++.|+.+ ..+.+||..+++-...-..........+...++ .+++.++.+ ..+.+||..+.+-
T Consensus 150 dg~~l~sgs~d------g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d-------g~v~~wd~~~~~~ 216 (357)
T 4g56_B 150 DGTQAVSGGKD------FSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED-------GRILLWDTRKPKP 216 (357)
T ss_dssp SSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETT-------SCEEECCTTSSSC
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccC-------CceEEEECCCCce
Confidence 55666666653 347888988765432211111111111112233 456665533 3588898877653
Q ss_pred EeccC---ccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEE-EeccCCCCCCCCCeeEEE-EC-CeEEEEcccC
Q 028925 93 CQMKN---GCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWK-MVPVPLTGSSSIGFRFGI-LD-GKLLLFSLEE 164 (202)
Q Consensus 93 ~~~~~---~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~-~~~~~~~~~~~~~~~~~~-~~-~~i~v~gG~~ 164 (202)
..... ......+.... ++.+++.|+ ....+.+||..+.+-. .+.. . ...-.+++. .+ +++++.|+..
T Consensus 217 ~~~~~~~~~~~~v~~v~~sp~~~~~la~g~-~d~~i~~wd~~~~~~~~~~~~---~-~~~v~~l~~sp~~~~~lasgs~D 291 (357)
T 4g56_B 217 ATRIDFCASDTIPTSVTWHPEKDDTFACGD-ETGNVSLVNIKNPDSAQTSAV---H-SQNITGLAYSYHSSPFLASISED 291 (357)
T ss_dssp BCBCCCTTCCSCEEEEEECTTSTTEEEEEE-SSSCEEEEESSCGGGCEEECC---C-SSCEEEEEECSSSSCCEEEEETT
T ss_pred eeeeeeccccccccchhhhhcccceEEEee-cccceeEEECCCCcEeEEEec---c-ceeEEEEEEcCCCCCEEEEEeCC
Confidence 22211 11111222222 355666664 5678999998765422 2211 1 111122222 13 4566666432
Q ss_pred CCCceeEEEeCCCC
Q 028925 165 EPSYSTLLYDPNAA 178 (202)
Q Consensus 165 ~~~~~~~~yd~~~~ 178 (202)
..+.+||.+++
T Consensus 292 ---~~i~iwd~~~~ 302 (357)
T 4g56_B 292 ---CTVAVLDADFS 302 (357)
T ss_dssp ---SCEEEECTTSC
T ss_pred ---CEEEEEECCCC
Confidence 25788888775
No 139
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.20 E-value=0.24 Score=38.87 Aligned_cols=105 Identities=12% Similarity=0.051 Sum_probs=53.2
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceee-ee-EEECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGC-FA-CSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~-~~-~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++.+++.|+.+ ..+.+||+.++.-............. .+ ..-++++++.|+.+ ..+.+||.....
T Consensus 176 ~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-------g~i~~wd~~~~~ 242 (435)
T 4e54_B 176 NTNQFYASSME------GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV-------GNVILLNMDGKE 242 (435)
T ss_dssp CTTEEEEECSS------SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS-------SBEEEEESSSCB
T ss_pred CCCEEEEEeCC------CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC-------CcEeeeccCcce
Confidence 34555555543 24677788776654443222111111 12 22367777777643 468889886554
Q ss_pred EEeccCccceeeeeEEE-CC-EEEEEeCCCCCeEEEEeCCCCc
Q 028925 92 WCQMKNGCVMVTAHAVV-GK-KLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 92 W~~~~~~~~~~~~~~~~-~~-~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
-..+........+.... ++ .+++.|+ ..+.+.+||..+.+
T Consensus 243 ~~~~~~h~~~v~~v~~~p~~~~~~~s~s-~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 243 LWNLRMHKKKVTHVALNPCCDWFLATAS-VDQTVKIWDLRQVR 284 (435)
T ss_dssp CCCSBCCSSCEEEEEECTTCSSEEEEEE-TTSBCCEEETTTCC
T ss_pred eEEEecccceEEeeeecCCCceEEEEec-CcceeeEEeccccc
Confidence 33332211122222222 33 3555554 56778888876544
No 140
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.20 E-value=0.84 Score=37.61 Aligned_cols=120 Identities=10% Similarity=0.096 Sum_probs=70.8
Q ss_pred eeEEECCEEEEEcCccCCCCCCcceEEEEeC-CCC--eEEeccCccc----------eeeeeEEECCEEEEEeCCCCCeE
Q 028925 57 FACSFDGKLYVMGGRSSFTIGNSKFVDVYNP-ERH--TWCQMKNGCV----------MVTAHAVVGKKLFCMEWKNQRKL 123 (202)
Q Consensus 57 ~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~-~~~--~W~~~~~~~~----------~~~~~~~~~~~iyv~Gg~~~~~~ 123 (202)
+-++.++.+|+.+.. ...++.+|. .+. .|+.-.+... ...+.++.+++||+.. ....+
T Consensus 57 ~P~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~dg~l 127 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF-------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQ--ANGHL 127 (571)
T ss_dssp CCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEEC--TTSEE
T ss_pred ccEEECCEEEEEeCC-------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEe--CCCEE
Confidence 445679999998642 235888998 654 5886542110 1123456788999874 35789
Q ss_pred EEEeCCCCc--EEEeccCCCCCCCCCeeEEEECCeEEEEcccC--CCCceeEEEeCCCCCCCcceee
Q 028925 124 TIFDPEDNS--WKMVPVPLTGSSSIGFRFGILDGKLLLFSLEE--EPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 124 ~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~--~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
+.+|.++.+ |+.-.............-++.+++||+-.... .....++.||++++. -.|+.-
T Consensus 128 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~-~~W~~~ 193 (571)
T 2ad6_A 128 LALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGE-LKWRAF 193 (571)
T ss_dssp EEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCC-EEEEEE
T ss_pred EEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCc-EEEEEc
Confidence 999998775 88643111110111222335688888754311 123478999998752 157653
No 141
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.19 E-value=0.75 Score=35.03 Aligned_cols=148 Identities=14% Similarity=0.038 Sum_probs=74.2
Q ss_pred eeeeEEEeCCCCCeEEcCCCCCCceeee-eEEECCE-EEEEcCccCCCCCCcceEEEEeCCCCeEEeccCcccee-----
Q 028925 30 LSSAEVYDPDTDKWNLIESLRRPRWGCF-ACSFDGK-LYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMV----- 102 (202)
Q Consensus 30 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~-~~~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~----- 102 (202)
...++.+|+.+.+.+.+........... .-.-+|+ |+..+...+ . ....++++|+.+.+-+.+...+...
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~--~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~ 291 (388)
T 3pe7_A 215 DARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKG-S--PDRFIYSADPETLENRQLTSMPACSHLMSN 291 (388)
T ss_dssp SCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETT-C--CCEEEEEECTTTCCEEEEEEECCEEEEEEC
T ss_pred cceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCC-C--CcceEEEEecCCCceEEEEcCCCceeeeec
Confidence 4578999998877766654322111111 1223666 433332211 1 1235999999988766654221100
Q ss_pred --eeeEEECCE-EEEEe-------CCCCCeEEEEeCCCCcEEEeccCCCCCC--------CCCeeEEEECCeEEEEcccC
Q 028925 103 --TAHAVVGKK-LFCME-------WKNQRKLTIFDPEDNSWKMVPVPLTGSS--------SIGFRFGILDGKLLLFSLEE 164 (202)
Q Consensus 103 --~~~~~~~~~-iyv~G-------g~~~~~~~~yd~~~~~W~~~~~~~~~~~--------~~~~~~~~~~~~i~v~gG~~ 164 (202)
......+++ |++.- +.....++++|+++.+-+.+......-. ........-+++.+++....
T Consensus 292 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~ 371 (388)
T 3pe7_A 292 YDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDV 371 (388)
T ss_dssp TTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECT
T ss_pred CCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecC
Confidence 001222332 33221 0235689999999988777752221000 11111223466555554444
Q ss_pred CCCceeEEEeCCCCCCCcc
Q 028925 165 EPSYSTLLYDPNAASGSEW 183 (202)
Q Consensus 165 ~~~~~~~~yd~~~~~~~~W 183 (202)
.....++.+|+... .|
T Consensus 372 ~g~~~l~~~~l~~~---~~ 387 (388)
T 3pe7_A 372 HGKPALYLATLPES---VW 387 (388)
T ss_dssp TSSCEEEEEECCGG---GG
T ss_pred CCceeEEEEECChh---cc
Confidence 44457999998876 66
No 142
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=95.18 E-value=0.88 Score=35.77 Aligned_cols=150 Identities=5% Similarity=-0.042 Sum_probs=78.2
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEc--CCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLI--ESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++++.|+.+ ..+.+||+.+.+.... .....+. ...+.. ++++++.|+.+ ..+.+||..+.+.
T Consensus 210 ~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~h~~~v-~~~~~s-d~~~l~s~~~d-------~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 210 HQFIITSDRD------EHIKISHYPQCFIVDKWLFGHKHFV-SSICCG-KDYLLLSAGGD-------DKIFAWDWKTGKN 274 (450)
T ss_dssp CEEEEEEETT------SCEEEEEESCTTCEEEECCCCSSCE-EEEEEC-STTEEEEEESS-------SEEEEEETTTCCE
T ss_pred CcEEEEEcCC------CcEEEEECCCCceeeeeecCCCCce-EEEEEC-CCCEEEEEeCC-------CeEEEEECCCCcE
Confidence 6777777654 3578888877654322 1111122 222223 77777776632 4688999887753
Q ss_pred EeccCc--------------------------cceeeeeEE-ECCEEEEEeCCCCCeEEEEeC--C-CCcEEEeccCCCC
Q 028925 93 CQMKNG--------------------------CVMVTAHAV-VGKKLFCMEWKNQRKLTIFDP--E-DNSWKMVPVPLTG 142 (202)
Q Consensus 93 ~~~~~~--------------------------~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~--~-~~~W~~~~~~~~~ 142 (202)
...-.. ......... .++..+++++...+.+.+||. . ..++..+......
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~ 354 (450)
T 2vdu_B 275 LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP 354 (450)
T ss_dssp EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS
T ss_pred eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC
Confidence 322110 001111111 234444444435678889988 3 3445555422111
Q ss_pred CCCCCeeEEEECCeEEEEcccCC------CCceeEEEeCCCCCCCcce
Q 028925 143 SSSIGFRFGILDGKLLLFSLEEE------PSYSTLLYDPNAASGSEWQ 184 (202)
Q Consensus 143 ~~~~~~~~~~~~~~i~v~gG~~~------~~~~~~~yd~~~~~~~~W~ 184 (202)
..-..++...+.+++..+... ....++.++.+++ .|+
T Consensus 355 --~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~---~~~ 397 (450)
T 2vdu_B 355 --YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNEN---SFV 397 (450)
T ss_dssp --SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTT---EEE
T ss_pred --CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCC---eEE
Confidence 223445566677777654432 1136777788877 664
No 143
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.16 E-value=0.81 Score=35.25 Aligned_cols=105 Identities=9% Similarity=0.065 Sum_probs=55.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++++++.|+.+ ..+.+||+.+.+-...-. ..........+ ++++++.|+.+ ..+.+||..+.+
T Consensus 108 ~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s~s~d-------~~i~iwd~~~~~ 172 (420)
T 3vl1_A 108 QMRRFILGTTE------GDIKVLDSNFNLQREIDQ--AHVSEITKLKFFPSGEALISSSQD-------MQLKIWSVKDGS 172 (420)
T ss_dssp SSCEEEEEETT------SCEEEECTTSCEEEEETT--SSSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTCC
T ss_pred CCCEEEEEECC------CCEEEEeCCCcceeeecc--cccCccEEEEECCCCCEEEEEeCC-------CeEEEEeCCCCc
Confidence 56667776543 357888987665433311 11111222222 66666666543 468899987654
Q ss_pred EEe-ccCccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 028925 92 WCQ-MKNGCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWK 134 (202)
Q Consensus 92 W~~-~~~~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~ 134 (202)
-.. +........+... .++..++.++ ..+.+.+||..+.+-.
T Consensus 173 ~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 173 NPRTLIGHRATVTDIAIIDRGRNVLSAS-LDGTIRLWECGTGTTI 216 (420)
T ss_dssp CCEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTTEEE
T ss_pred CceEEcCCCCcEEEEEEcCCCCEEEEEc-CCCcEEEeECCCCcee
Confidence 211 1111122222222 2555555554 5678999998877533
No 144
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=95.12 E-value=0.77 Score=34.77 Aligned_cols=111 Identities=15% Similarity=0.144 Sum_probs=55.3
Q ss_pred EEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCE-EEEEcCccCCCCCCcceE--EEEeCCCCeE
Q 028925 16 KIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGK-LYVMGGRSSFTIGNSKFV--DVYNPERHTW 92 (202)
Q Consensus 16 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~-iy~~gG~~~~~~~~~~~~--~~yd~~~~~W 92 (202)
...++|.+......--.+|.+|+.+.+.+.+.......-...+..-+++ ||+.+...+ ....+ +.+|+.+.+.
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~----~~~~v~~~~~~~~~g~~ 89 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSK----DQAAVSAFAFDKEKGTL 89 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSS----TTCEEEEEEEETTTTEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCC----CCCcEEEEEEeCCCCcE
Confidence 3444565543333334577788888888766543111111122223555 666543211 12344 4556666777
Q ss_pred EeccC---ccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCC
Q 028925 93 CQMKN---GCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDN 131 (202)
Q Consensus 93 ~~~~~---~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~ 131 (202)
+.+.. ..........-++.||+... ....+.+|+..++
T Consensus 90 ~~~~~~~~~~~~p~~~~~dg~~l~~~~~-~~~~v~~~~~~~~ 130 (361)
T 3scy_A 90 HLLNTQKTMGADPCYLTTNGKNIVTANY-SGGSITVFPIGQD 130 (361)
T ss_dssp EEEEEEECSSSCEEEEEECSSEEEEEET-TTTEEEEEEBCTT
T ss_pred EEeeEeccCCCCcEEEEECCCEEEEEEC-CCCEEEEEEeCCC
Confidence 66542 11222222333344666653 4678889987643
No 145
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.10 E-value=0.51 Score=37.39 Aligned_cols=144 Identities=10% Similarity=0.157 Sum_probs=75.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCE-EEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGK-LYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
++.||+.-- . ..+.++|+.+++.+.+.. ...+-.+.+...+++ ||+....... ....+..+++.. .+
T Consensus 149 ~g~Lyv~d~-----~--~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~---~~~~v~~~~~~g-~~ 216 (430)
T 3tc9_A 149 HNHLYLVGE-----Q--HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNN---DRPNNYILTRES-GF 216 (430)
T ss_dssp EEEEEEEEB-----T--EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCT---TSEEEEEEEGGG-TS
T ss_pred CCeEEEEeC-----C--CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCc---ccceEEEEeCCC-ce
Confidence 478999842 1 678999999888776643 222222222233555 8887532211 123455666432 23
Q ss_pred E---eccCccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCe-EEEEcccCC
Q 028925 93 C---QMKNGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGK-LLLFSLEEE 165 (202)
Q Consensus 93 ~---~~~~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~-i~v~gG~~~ 165 (202)
. .++.... ..+.++. ++.||+... ....+++||+++..-..+...... .....++.. +++ ||+.. .
T Consensus 217 ~~~~~l~~~~~-p~giavdp~~g~lyv~d~-~~~~V~~~~~~~~~~~~~~~~~~~--~~P~gia~~pdG~~lyv~d---~ 289 (430)
T 3tc9_A 217 KVITELTKGQN-CNGAETHPINGELYFNSW-NAGQVFRYDFTTQETTPLFTIQDS--GWEFHIQFHPSGNYAYIVV---V 289 (430)
T ss_dssp CSEEEEEECSS-CCCEEECTTTCCEEEEET-TTTEEEEEETTTTEEEEEEECSSS--SCCEEEEECTTSSEEEEEE---T
T ss_pred eeeeeeccCCC-ceEEEEeCCCCEEEEEEC-CCCEEEEEECCCCcEEEEEEcCCC--CcceeEEEcCCCCEEEEEE---C
Confidence 2 2221111 1222232 678998864 457899999987765343211111 122234443 444 99875 2
Q ss_pred CCceeEEEeCC
Q 028925 166 PSYSTLLYDPN 176 (202)
Q Consensus 166 ~~~~~~~yd~~ 176 (202)
....+++++.+
T Consensus 290 ~~~~I~~~~~d 300 (430)
T 3tc9_A 290 NQHYILRSDYD 300 (430)
T ss_dssp TTTEEEEEEEE
T ss_pred CCCEEEEEeCC
Confidence 23467776554
No 146
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.08 E-value=1.3 Score=37.23 Aligned_cols=138 Identities=11% Similarity=0.015 Sum_probs=76.5
Q ss_pred eeeeEEEeCCC------C--CeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCC---eEEeccCc
Q 028925 30 LSSAEVYDPDT------D--KWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH---TWCQMKNG 98 (202)
Q Consensus 30 ~~~~~~yd~~t------~--~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~---~W~~~~~~ 98 (202)
..+++++|+.+ . +++.+......... ....-++.||+.+.... ....++++|..+. .|+.+.+.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~----~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHS----PNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC----TTCEEEEEETTSCCGGGCEEEECC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCC----CCCEEEEEeCCCCCcccceeccCC
Confidence 35789999876 4 57776543222222 22234667887764321 2457899998765 48877643
Q ss_pred cc--eeeeeEEE-CCEEEEEeCC-CCCeEEEEeCCCCc-EEEeccCCCCCCCCCeeEEEE--CC-eEEEEc-ccCCCCce
Q 028925 99 CV--MVTAHAVV-GKKLFCMEWK-NQRKLTIFDPEDNS-WKMVPVPLTGSSSIGFRFGIL--DG-KLLLFS-LEEEPSYS 169 (202)
Q Consensus 99 ~~--~~~~~~~~-~~~iyv~Gg~-~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~~~~~--~~-~i~v~g-G~~~~~~~ 169 (202)
.. ........ ++.+++.... ....++.+|+.+++ .+.+..+ . . ....+.. ++ .+++.. +...+ ..
T Consensus 333 ~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~--~--~-~v~~~~~s~d~~~l~~~~ss~~~P-~~ 406 (710)
T 2xdw_A 333 HEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE--V--G-SVVGYSGQKKDTEIFYQFTSFLSP-GI 406 (710)
T ss_dssp CSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCC--S--S-EEEEEECCTTCSEEEEEEECSSCC-CE
T ss_pred CCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCC--C--c-eEEEEecCCCCCEEEEEEeCCCCC-CE
Confidence 22 23334445 6777776532 23568889985554 4555422 1 1 1111222 34 455433 33333 37
Q ss_pred eEEEeCCCC
Q 028925 170 TLLYDPNAA 178 (202)
Q Consensus 170 ~~~yd~~~~ 178 (202)
++.||..++
T Consensus 407 i~~~d~~tg 415 (710)
T 2xdw_A 407 IYHCDLTKE 415 (710)
T ss_dssp EEEEETTSS
T ss_pred EEEEECCCC
Confidence 999999887
No 147
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=95.08 E-value=0.7 Score=34.09 Aligned_cols=31 Identities=13% Similarity=0.235 Sum_probs=19.4
Q ss_pred CCeEEEEcccCCCCceeEEEeCCCCCCCcceeeccc
Q 028925 154 DGKLLLFSLEEEPSYSTLLYDPNAASGSEWQTSKIK 189 (202)
Q Consensus 154 ~~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~~~~ 189 (202)
++++++.|+.. ..+.+||..++. .|+.+..+
T Consensus 317 ~~~~l~s~~~d---g~v~iw~~~~~~--~~~~~~~~ 347 (351)
T 3f3f_A 317 TGTILSSAGDD---GKVRLWKATYSN--EFKCMSVI 347 (351)
T ss_dssp SSCCEEEEETT---SCEEEEEECTTS--CEEEEEEE
T ss_pred CCCEEEEecCC---CcEEEEecCcCc--chhheeeh
Confidence 56667766542 257888887641 67776544
No 148
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.04 E-value=0.59 Score=38.21 Aligned_cols=141 Identities=9% Similarity=0.031 Sum_probs=69.9
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccC---ccceeeeeE
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKN---GCVMVTAHA 106 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~~~~~~~~~ 106 (202)
..++++|..+.+-..+..++..+.-+..+. -+++.++++... ...+.++|..+++-...-+ .+....+..
T Consensus 302 g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~------~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~ 375 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANN------SNKVAVIDSKDRRLSALVDVGKTPHPGRGAN 375 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGG------GTEEEEEETTTTEEEEEEECSSSBCCTTCEE
T ss_pred CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecC------CCeEEEEECCCCeEEEeeccCCCCCCCCCcc
Confidence 468888887654221111112222222222 356533333221 3468889999887554321 122111222
Q ss_pred -EE--CCEEEEEeCCCCCeEEEEeCCCC-----cEEEeccCCCCCCCCCeeEEEE--CCeEEEEcccCCC---CceeEEE
Q 028925 107 -VV--GKKLFCMEWKNQRKLTIFDPEDN-----SWKMVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEEP---SYSTLLY 173 (202)
Q Consensus 107 -~~--~~~iyv~Gg~~~~~~~~yd~~~~-----~W~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~~---~~~~~~y 173 (202)
.. ++.+|+.+......+.++|.++. .|+.+.....+. .....+... +..||+-.-.+.+ ...+.+|
T Consensus 376 ~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g-~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~ 454 (543)
T 1nir_A 376 FVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQG-GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 454 (543)
T ss_dssp EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSC-SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEE
T ss_pred cCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCC-CCceEEEcCCCCCcEEEecCCCCCcccCceEEEE
Confidence 22 36788876434578889998762 377665221111 111222222 4456653311221 3479999
Q ss_pred eCCCC
Q 028925 174 DPNAA 178 (202)
Q Consensus 174 d~~~~ 178 (202)
|.++.
T Consensus 455 d~~~~ 459 (543)
T 1nir_A 455 DLKNL 459 (543)
T ss_dssp ETTCT
T ss_pred ECCCC
Confidence 99876
No 149
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.04 E-value=0.64 Score=35.59 Aligned_cols=143 Identities=9% Similarity=0.025 Sum_probs=70.0
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEe
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQ 94 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~ 94 (202)
+..+++|+.+ ..+.+||+.+.+-...-..........+..-++++++.++.+ ..+.+||..+.+-..
T Consensus 217 ~~~~~~~~~~------g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~ 283 (425)
T 1r5m_A 217 DDKFVIPGPK------GAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDD-------GTLRIWHGGNGNSQN 283 (425)
T ss_dssp TTEEEEECGG------GCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETT-------SCEEEECSSSBSCSE
T ss_pred CCEEEEEcCC------CeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCC-------CEEEEEECCCCccce
Confidence 3345555543 458889988764321111111111111122356666666532 358888877653222
Q ss_pred c-cCccceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeE
Q 028925 95 M-KNGCVMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTL 171 (202)
Q Consensus 95 ~-~~~~~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~ 171 (202)
. ............. ++ +++.++ ..+.+.+||..+.+-...-.. . ...-..++. .++++++.++.. ..+.
T Consensus 284 ~~~~~~~~i~~~~~~~~~-~l~~~~-~d~~i~i~d~~~~~~~~~~~~--~-~~~i~~~~~s~~~~~l~~~~~d---g~i~ 355 (425)
T 1r5m_A 284 CFYGHSQSIVSASWVGDD-KVISCS-MDGSVRLWSLKQNTLLALSIV--D-GVPIFAGRISQDGQKYAVAFMD---GQVN 355 (425)
T ss_dssp EECCCSSCEEEEEEETTT-EEEEEE-TTSEEEEEETTTTEEEEEEEC--T-TCCEEEEEECTTSSEEEEEETT---SCEE
T ss_pred EecCCCccEEEEEECCCC-EEEEEe-CCCcEEEEECCCCcEeEeccc--C-CccEEEEEEcCCCCEEEEEECC---CeEE
Confidence 1 1122222233333 45 444444 678999999987664333211 1 111122222 256777776542 2577
Q ss_pred EEeCCCC
Q 028925 172 LYDPNAA 178 (202)
Q Consensus 172 ~yd~~~~ 178 (202)
+||..+.
T Consensus 356 i~~~~~~ 362 (425)
T 1r5m_A 356 VYDLKKL 362 (425)
T ss_dssp EEECHHH
T ss_pred EEECCCC
Confidence 8887654
No 150
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.00 E-value=0.27 Score=37.52 Aligned_cols=145 Identities=14% Similarity=0.131 Sum_probs=71.2
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCC----------CCC-CceeeeeEEE---CCEEEEEcCccCCCCCCc
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIES----------LRR-PRWGCFACSF---DGKLYVMGGRSSFTIGNS 79 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~----------~~~-~r~~~~~~~~---~~~iy~~gG~~~~~~~~~ 79 (202)
++++++.|+.+ ..+.+||..+.+...... .+. .........+ ++.+++.++.+
T Consensus 55 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d------- 121 (408)
T 4a11_B 55 EGRYMLSGGSD------GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD------- 121 (408)
T ss_dssp TCCEEEEEETT------SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-------
T ss_pred CCCEEEEEcCC------CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-------
Confidence 56777777654 347888887765322110 000 1111222222 45566666532
Q ss_pred ceEEEEeCCCCeEEeccCccceeeeeEEE----CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-C
Q 028925 80 KFVDVYNPERHTWCQMKNGCVMVTAHAVV----GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-D 154 (202)
Q Consensus 80 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~----~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~ 154 (202)
..+.+||..+.+-................ ++.+++.|+ ..+.+.+||..+..-...- . .. ...-.+++.. +
T Consensus 122 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~d~~~~~~~~~~-~-~~-~~~v~~~~~~~~ 197 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGT-RGPKVQLCDLKSGSCSHIL-Q-GH-RQEILAVSWSPR 197 (408)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEE-SSSSEEEEESSSSCCCEEE-C-CC-CSCEEEEEECSS
T ss_pred CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEc-CCCeEEEEeCCCcceeeee-c-CC-CCcEEEEEECCC
Confidence 46889998887644433211111111111 334555554 5778999998766432221 1 11 1111222222 3
Q ss_pred Ce-EEEEcccCCCCceeEEEeCCCC
Q 028925 155 GK-LLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 155 ~~-i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
++ +++.|+.. ..+.+||..+.
T Consensus 198 ~~~ll~~~~~d---g~i~i~d~~~~ 219 (408)
T 4a11_B 198 YDYILATASAD---SRVKLWDVRRA 219 (408)
T ss_dssp CTTEEEEEETT---SCEEEEETTCS
T ss_pred CCcEEEEEcCC---CcEEEEECCCC
Confidence 33 67766542 25777887553
No 151
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=94.99 E-value=0.79 Score=34.24 Aligned_cols=142 Identities=12% Similarity=0.124 Sum_probs=68.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEE-cCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNL-IESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
+++..+.|+.+ ..+.+||+.+++-.. ......+ ...+. -++.+++.|+.+ ..+.+||....
T Consensus 76 dg~~l~s~s~D------~~v~~wd~~~~~~~~~~~~h~~~---v~~~~~~~~~~~l~s~s~D-------~~i~vwd~~~~ 139 (319)
T 3frx_A 76 DGAYALSASWD------KTLRLWDVATGETYQRFVGHKSD---VMSVDIDKKASMIISGSRD-------KTIKVWTIKGQ 139 (319)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSC---EEEEEECTTSCEEEEEETT-------SCEEEEETTSC
T ss_pred CCCEEEEEeCC------CEEEEEECCCCCeeEEEccCCCc---EEEEEEcCCCCEEEEEeCC-------CeEEEEECCCC
Confidence 44555555543 457888988765322 2111111 12222 256666666543 45888888655
Q ss_pred eEEeccCccceeeeeEEE-------CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcc
Q 028925 91 TWCQMKNGCVMVTAHAVV-------GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSL 162 (202)
Q Consensus 91 ~W~~~~~~~~~~~~~~~~-------~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG 162 (202)
.-..+............. ++.+++.++ ....+.+||..+.+-...- ... ...-.+++. .++++++.|+
T Consensus 140 ~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~~~--~~h-~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 140 CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAG-NDKMVKAWNLNQFQIEADF--IGH-NSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp EEEEECCCSSCEEEEEECCC------CCEEEEEE-TTSCEEEEETTTTEEEEEE--CCC-CSCEEEEEECTTSSEEEEEE
T ss_pred eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEe-CCCEEEEEECCcchhheee--cCC-CCcEEEEEEcCCCCEEEEEe
Confidence 443333211111122111 222444443 6788999998776543321 111 111112222 2566666665
Q ss_pred cCCCCceeEEEeCCCC
Q 028925 163 EEEPSYSTLLYDPNAA 178 (202)
Q Consensus 163 ~~~~~~~~~~yd~~~~ 178 (202)
.. ..+.+||..+.
T Consensus 216 ~d---g~i~iwd~~~~ 228 (319)
T 3frx_A 216 KD---GEIMLWNLAAK 228 (319)
T ss_dssp TT---CEEEEEETTTT
T ss_pred CC---CeEEEEECCCC
Confidence 42 25677776654
No 152
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.96 E-value=0.58 Score=35.72 Aligned_cols=148 Identities=10% Similarity=0.069 Sum_probs=72.4
Q ss_pred EEEEEcCcCCCCCceeeeEEEeCCCCC------eEEcCCCCC----CceeeeeEE----ECCEE-EEEcCccCCCCCCcc
Q 028925 16 KIYAVGGYGMDGESLSSAEVYDPDTDK------WNLIESLRR----PRWGCFACS----FDGKL-YVMGGRSSFTIGNSK 80 (202)
Q Consensus 16 ~iyv~GG~~~~~~~~~~~~~yd~~t~~------W~~~~~~~~----~r~~~~~~~----~~~~i-y~~gG~~~~~~~~~~ 80 (202)
++++.|+.+ ..+.+||+.+.+ +......+. ......... -+++. ++.|+.+ .
T Consensus 82 ~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-------g 148 (397)
T 1sq9_A 82 CLVATTSFS------GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-------G 148 (397)
T ss_dssp EEEEEEETT------SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-------S
T ss_pred cEEEEEcCC------CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-------C
Confidence 777777653 347777877766 666654431 222222223 34666 6666543 3
Q ss_pred eEEEEeCCC------Ce---EE---ec-------cCccceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCC
Q 028925 81 FVDVYNPER------HT---WC---QM-------KNGCVMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPL 140 (202)
Q Consensus 81 ~~~~yd~~~------~~---W~---~~-------~~~~~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~ 140 (202)
.+.+||..+ .+ |. .+ ........++... ++ +++.|+ ....+.+||..+.+-...-...
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~-~dg~i~i~d~~~~~~~~~~~~~ 226 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF-NNGTVQISELSTLRPLYNFESQ 226 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC-TTSEEEEEETTTTEEEEEEECC
T ss_pred cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe-CCCcEEEEECCCCceeEEEecc
Confidence 577777655 21 11 11 0011111222222 45 555554 6788999999877544332110
Q ss_pred CCC---CCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 141 TGS---SSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 141 ~~~---~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
... ...-..++. .++++++.++.......+.+||..+.
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 000 111222222 26777777754322247888998765
No 153
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.88 E-value=0.68 Score=41.43 Aligned_cols=143 Identities=15% Similarity=0.161 Sum_probs=74.2
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++.++.|+.+ ..+.+||..+.+-... +........++. -++++++.|+.+ ..+.+||..+.+
T Consensus 626 ~~~~l~s~~~d------~~i~vw~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~d-------~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 626 DGQRIASCGAD------KTLQVFKAETGEKLLD--IKAHEDEVLCCAFSSDDSYIATCSAD-------KKVKIWDSATGK 690 (1249)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTCC
T ss_pred CCCEEEEEeCC------CeEEEEECCCCCEEEE--eccCCCCEEEEEEecCCCEEEEEeCC-------CeEEEEECCCCc
Confidence 56667777653 3588899987764322 111111122222 366676666532 468999988775
Q ss_pred EEecc-CccceeeeeEEE---CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCC
Q 028925 92 WCQMK-NGCVMVTAHAVV---GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEP 166 (202)
Q Consensus 92 W~~~~-~~~~~~~~~~~~---~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~ 166 (202)
-...- ............ ++.+++.| ...+.+.+||..+..-...-. .. ...-.+++. .+++.++.++..
T Consensus 691 ~~~~~~~~~~~v~~~~~~~~~~~~~l~sg-~~d~~v~vwd~~~~~~~~~~~--~h-~~~v~~~~~sp~~~~l~s~s~d-- 764 (1249)
T 3sfz_A 691 LVHTYDEHSEQVNCCHFTNKSNHLLLATG-SNDFFLKLWDLNQKECRNTMF--GH-TNSVNHCRFSPDDELLASCSAD-- 764 (1249)
T ss_dssp EEEEEECCSSCEEEEEECSSSSCCEEEEE-ETTSCEEEEETTSSSEEEEEC--CC-SSCEEEEEECSSTTEEEEEESS--
T ss_pred eEEEEcCCCCcEEEEEEecCCCceEEEEE-eCCCeEEEEECCCcchhheec--CC-CCCEEEEEEecCCCEEEEEECC--
Confidence 43322 111122222222 23344444 467889999998876544321 11 111112222 256666666542
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
..+.+||..+.
T Consensus 765 -g~v~vwd~~~~ 775 (1249)
T 3sfz_A 765 -GTLRLWDVRSA 775 (1249)
T ss_dssp -SEEEEEEGGGT
T ss_pred -CeEEEEeCCCC
Confidence 25777777654
No 154
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.88 E-value=0.39 Score=40.83 Aligned_cols=146 Identities=10% Similarity=0.139 Sum_probs=73.8
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--C--CEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--D--GKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
++.++.|+.+ ..+.+||+.+++|..+..+.........+.+ + +++++.|+.+ ..+.+||..+.
T Consensus 67 ~~~l~s~s~D------g~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-------g~I~vwdl~~~ 133 (753)
T 3jro_A 67 GTILASCSYD------GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKEN 133 (753)
T ss_dssp CSEEEEEETT------SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SEEEEEECCSS
T ss_pred CCEEEEEeCC------CeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC-------CcEEEEEeecC
Confidence 5566666543 3578888888877665443322222233333 3 6677777643 46888887765
Q ss_pred eEEec---cCccceeeeeEEE--------------CCEEEEEeCCCCCeEEEEeCCCC--cEEEeccCCCCCCCCCeeEE
Q 028925 91 TWCQM---KNGCVMVTAHAVV--------------GKKLFCMEWKNQRKLTIFDPEDN--SWKMVPVPLTGSSSIGFRFG 151 (202)
Q Consensus 91 ~W~~~---~~~~~~~~~~~~~--------------~~~iyv~Gg~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~ 151 (202)
.-... ........+.... ++.+++.|+ ..+.+.+||..+. .+......... ...-.+++
T Consensus 134 ~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs-~dg~I~iwd~~~~~~~~~~~~~~~~h-~~~V~~l~ 211 (753)
T 3jro_A 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGG-ADNLVKIWKYNSDAQTYVLESTLEGH-SDWVRDVA 211 (753)
T ss_dssp SCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEE-TTSCEEEEEEETTTTEEEEEEEECCC-SSCEEEEE
T ss_pred CCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEE-CCCeEEEEeccCCcccceeeeeecCC-CCcEEEEE
Confidence 21111 1111111122111 245566654 5677888887554 34443311111 11122222
Q ss_pred EE-C---CeEEEEcccCCCCceeEEEeCCCC
Q 028925 152 IL-D---GKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 152 ~~-~---~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.. + +++++.|+.. ..+.+||..+.
T Consensus 212 ~sp~~~~~~~l~s~s~D---g~I~iwd~~~~ 239 (753)
T 3jro_A 212 WSPTVLLRSYLASVSQD---RTCIIWTQDNE 239 (753)
T ss_dssp ECCCCSSSEEEEEEESS---SCEEEEEESSS
T ss_pred eccCCCCCCEEEEEecC---CEEEEecCCCC
Confidence 22 3 6777777643 25777777653
No 155
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.84 E-value=0.76 Score=38.90 Aligned_cols=145 Identities=8% Similarity=-0.033 Sum_probs=74.7
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
++...++|+.+ ..+.+||..+.+....-.............-+++.++.|+.+ ..+.+||..+.+..
T Consensus 24 ~~~~la~~~~~------g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------g~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 24 TEPWVLTTLYS------GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-------FRIRVFNYNTGEKV 90 (814)
T ss_dssp SSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-------SEEEEEETTTCCEE
T ss_pred CCCEEEEEeCC------CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCcEE
Confidence 56666666542 358888988765433211111111222222366666666542 46899998877654
Q ss_pred ecc-CccceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCC-cEEEeccCCCCCCCCCeeEEEE--CCeEEEEcccCCCCc
Q 028925 94 QMK-NGCVMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDN-SWKMVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEEPSY 168 (202)
Q Consensus 94 ~~~-~~~~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~-~W~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~~~~ 168 (202)
..- .......... ..++..++.++ ..+.+.+||..++ .....- . .. ...-.+++.. ++.+++.++.. .
T Consensus 91 ~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~-~-~~-~~~v~~~~~~p~~~~~l~~~~~d---g 163 (814)
T 3mkq_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENNWALEQTF-E-GH-EHFVMCVAFNPKDPSTFASGCLD---R 163 (814)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEE-TTSEEEEEEGGGTSEEEEEE-E-CC-SSCEEEEEEETTEEEEEEEEETT---S
T ss_pred EEEecCCCCEEEEEEeCCCCEEEEEc-CCCEEEEEECCCCceEEEEE-c-CC-CCcEEEEEEEcCCCCEEEEEeCC---C
Confidence 322 2222222222 23555555554 5788999998776 222221 1 11 1112233333 45677776542 3
Q ss_pred eeEEEeCCCC
Q 028925 169 STLLYDPNAA 178 (202)
Q Consensus 169 ~~~~yd~~~~ 178 (202)
.+.+||..+.
T Consensus 164 ~v~vwd~~~~ 173 (814)
T 3mkq_A 164 TVKVWSLGQS 173 (814)
T ss_dssp EEEEEETTCS
T ss_pred eEEEEECCCC
Confidence 6888887654
No 156
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.79 E-value=0.44 Score=42.63 Aligned_cols=145 Identities=8% Similarity=0.024 Sum_probs=74.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
+++..++|+.+ ..+.+||..+.+...............+..-+++.++.|+.+ ..+.+||..+.+..
T Consensus 972 ~g~~l~~g~~~------g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-------g~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 972 HLEYVAFGDED------GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-------SVIQVWNWQTGDYV 1038 (1249)
T ss_dssp TSSEEEEEETT------SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-------SBEEEEETTTTEEE
T ss_pred CCCEEEEEcCC------CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-------CEEEEEECCCCceE
Confidence 45556665543 357888888766433221111111112222366766666543 46899999988876
Q ss_pred eccCccceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEE
Q 028925 94 QMKNGCVMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLL 172 (202)
Q Consensus 94 ~~~~~~~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~ 172 (202)
............... ++.++ .++ ..+.+.+||..+.+-...-..... .........+++.++.++.. ..+.+
T Consensus 1039 ~~~~~~~~v~~~~~~~~~~l~-~~~-~dg~v~vwd~~~~~~~~~~~~~~~--~v~~~~~s~d~~~l~s~s~d---~~v~i 1111 (1249)
T 3sfz_A 1039 FLQAHQETVKDFRLLQDSRLL-SWS-FDGTVKVWNVITGRIERDFTCHQG--TVLSCAISSDATKFSSTSAD---KTAKI 1111 (1249)
T ss_dssp CCBCCSSCEEEEEECSSSEEE-EEE-SSSEEEEEETTTTCCCEEEECCSS--CCCCEEECSSSSSCEEECCS---SCCCE
T ss_pred EEecCCCcEEEEEEcCCCcEE-EEE-CCCcEEEEECCCCceeEEEcccCC--cEEEEEECCCCCEEEEEcCC---CcEEE
Confidence 554333222333333 44544 443 567899999887763332111111 11111122356666666432 24666
Q ss_pred EeCCCC
Q 028925 173 YDPNAA 178 (202)
Q Consensus 173 yd~~~~ 178 (202)
||..+.
T Consensus 1112 wd~~~~ 1117 (1249)
T 3sfz_A 1112 WSFDLL 1117 (1249)
T ss_dssp ECSSSS
T ss_pred EECCCc
Confidence 776553
No 157
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=94.73 E-value=0.88 Score=33.55 Aligned_cols=144 Identities=11% Similarity=0.027 Sum_probs=75.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCC-C
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPER-H 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~-~ 90 (202)
.+++++.+..+ ..+.++|+++.+ |+.-..-. .........-+|+|++.+ ...+.+||+.. .
T Consensus 4 ~~~~lv~~~~~------~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~---------~~~V~~~d~~G~~ 67 (276)
T 3no2_A 4 PQHLLVGGSGW------NKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY---------SKGAKMITRDGRE 67 (276)
T ss_dssp CCEEEEECTTC------SEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC---------BSEEEEECTTSCE
T ss_pred CCcEEEeeCCC------CEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC---------CCCEEEECCCCCE
Confidence 46777876543 467888987776 65443211 122223334588888832 23589999832 2
Q ss_pred eEEeccCccce-eeeeEEECCEEEEEeCCCCCeEEEEeCCCCc-EEEeccCC--CCCCCCCeeEEEECCeEEEEcccCCC
Q 028925 91 TWCQMKNGCVM-VTAHAVVGKKLFCMEWKNQRKLTIFDPEDNS-WKMVPVPL--TGSSSIGFRFGILDGKLLLFSLEEEP 166 (202)
Q Consensus 91 ~W~~~~~~~~~-~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~-W~~~~~~~--~~~~~~~~~~~~~~~~i~v~gG~~~~ 166 (202)
.|+.-.+.... .......++++++........++.+|++... |+.-.... .+...........++.+++... .
T Consensus 68 ~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~---~ 144 (276)
T 3no2_A 68 LWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF---A 144 (276)
T ss_dssp EEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET---T
T ss_pred EEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec---C
Confidence 46654332222 2233445778877764336688889986553 44321111 0000111122234666666542 2
Q ss_pred CceeEEEeCC
Q 028925 167 SYSTLLYDPN 176 (202)
Q Consensus 167 ~~~~~~yd~~ 176 (202)
...+..||++
T Consensus 145 ~~~v~~~d~~ 154 (276)
T 3no2_A 145 TSEVREIAPN 154 (276)
T ss_dssp TTEEEEECTT
T ss_pred CCEEEEECCC
Confidence 2368888886
No 158
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.72 E-value=0.97 Score=34.62 Aligned_cols=147 Identities=10% Similarity=0.103 Sum_probs=73.6
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCC----ceeeeeEEE--CC-EEEEEcCccCCCCCCcceEEEEeC
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRP----RWGCFACSF--DG-KLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----r~~~~~~~~--~~-~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
+.+++.|+.+ ..+.+||+.+.+-...-..... ........+ ++ .+++.++.+. ....+.+||.
T Consensus 178 ~~~l~~~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~----~~~~i~~~d~ 247 (416)
T 2pm9_A 178 AHVFASAGSS------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD----NDPSILIWDL 247 (416)
T ss_dssp TTEEEEESSS------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS----SSCCCCEEET
T ss_pred CcEEEEEcCC------CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCC----CCceEEEEeC
Confidence 5677777653 3588899987665333222211 111222222 33 4666665432 1125788888
Q ss_pred CCCe--EEecc-CccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CC-eEEEE
Q 028925 88 ERHT--WCQMK-NGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DG-KLLLF 160 (202)
Q Consensus 88 ~~~~--W~~~~-~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~-~i~v~ 160 (202)
.+.. -..+. ............ ++.+++.++ ..+.+.+||..+.+-...-.. .. ..-..++.. ++ ++++.
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~-~dg~v~~wd~~~~~~~~~~~~-~~--~~v~~~~~s~~~~~~l~s 323 (416)
T 2pm9_A 248 RNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSG-RDNTVLLWNPESAEQLSQFPA-RG--NWCFKTKFAPEAPDLFAC 323 (416)
T ss_dssp TSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEE-SSSEEEEECSSSCCEEEEEEC-SS--SCCCCEEECTTCTTEEEE
T ss_pred CCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEe-CCCCEEEeeCCCCccceeecC-CC--CceEEEEECCCCCCEEEE
Confidence 7642 11111 111122222222 566666665 577899999887654332111 11 111122222 44 67777
Q ss_pred cccCCCCceeEEEeCCCC
Q 028925 161 SLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 161 gG~~~~~~~~~~yd~~~~ 178 (202)
++.. ..+.+||..+.
T Consensus 324 ~~~d---~~i~iw~~~~~ 338 (416)
T 2pm9_A 324 ASFD---NKIEVQTLQNL 338 (416)
T ss_dssp CCSS---SEEEEEESCCC
T ss_pred EecC---CcEEEEEccCC
Confidence 7542 36788887654
No 159
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.59 E-value=0.92 Score=33.12 Aligned_cols=149 Identities=9% Similarity=0.145 Sum_probs=71.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
++..++.|+.+ ..+.+||.... -.................-+++ ++.|+. ...+.+||..+.+-.
T Consensus 154 ~~~~l~~~~~d------~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~~-~~~~~~-------dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 154 SENKFLTASAD------KTIKLWQNDKV-IKTFSGIHNDVVRHLAVVDDGH-FISCSN-------DGLIKLVDMHTGDVL 218 (313)
T ss_dssp TTTEEEEEETT------SCEEEEETTEE-EEEECSSCSSCEEEEEEEETTE-EEEEET-------TSEEEEEETTTCCEE
T ss_pred CCCEEEEEECC------CCEEEEecCce-EEEEeccCcccEEEEEEcCCCe-EEEccC-------CCeEEEEECCchhhh
Confidence 45555555543 34677773321 1222221222222223334677 445543 246889998766422
Q ss_pred ec-cCccceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCcee
Q 028925 94 QM-KNGCVMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYST 170 (202)
Q Consensus 94 ~~-~~~~~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~ 170 (202)
.. ............. ++.++ .++ ..+.+.+||..+.+....-... . ..-..++. .++++ +.++. ...+
T Consensus 219 ~~~~~~~~~i~~~~~~~~~~l~-~~~-~dg~v~iwd~~~~~~~~~~~~~-~--~~i~~~~~~~~~~~-~~~~~---dg~i 289 (313)
T 3odt_A 219 RTYEGHESFVYCIKLLPNGDIV-SCG-EDRTVRIWSKENGSLKQVITLP-A--ISIWSVDCMSNGDI-IVGSS---DNLV 289 (313)
T ss_dssp EEEECCSSCEEEEEECTTSCEE-EEE-TTSEEEEECTTTCCEEEEEECS-S--SCEEEEEECTTSCE-EEEET---TSCE
T ss_pred hhhhcCCceEEEEEEecCCCEE-EEe-cCCEEEEEECCCCceeEEEecc-C--ceEEEEEEccCCCE-EEEeC---CCcE
Confidence 21 1122222222232 44433 443 6788999999888754432111 1 11122332 25664 44543 2368
Q ss_pred EEEeCCCCCCCcceeeccc
Q 028925 171 LLYDPNAASGSEWQTSKIK 189 (202)
Q Consensus 171 ~~yd~~~~~~~~W~~~~~~ 189 (202)
.+||.+++ ++.....+
T Consensus 290 ~iw~~~~~---~~~~~~~~ 305 (313)
T 3odt_A 290 RIFSQEKS---RWASEDEI 305 (313)
T ss_dssp EEEESCGG---GCCC----
T ss_pred EEEeCCCC---ceeehhhh
Confidence 99999987 77665433
No 160
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.53 E-value=1 Score=33.33 Aligned_cols=105 Identities=10% Similarity=-0.010 Sum_probs=59.0
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCC
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPL 140 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~ 140 (202)
++.||++.-. ...+++||+.+.+-....... ...+. ...++++++.. ...+.+||+++.+++.+....
T Consensus 24 ~~~l~~~d~~-------~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~dG~l~v~~---~~~l~~~d~~~g~~~~~~~~~ 92 (297)
T 3g4e_A 24 SNSLLFVDIP-------AKKVCRWDSFTKQVQRVTMDA-PVSSVALRQSGGYVATI---GTKFCALNWKEQSAVVLATVD 92 (297)
T ss_dssp TTEEEEEETT-------TTEEEEEETTTCCEEEEECSS-CEEEEEEBTTSSEEEEE---TTEEEEEETTTTEEEEEEECC
T ss_pred CCEEEEEECC-------CCEEEEEECCCCcEEEEeCCC-ceEEEEECCCCCEEEEE---CCeEEEEECCCCcEEEEEecC
Confidence 4678887532 346899999887654443211 12222 22367777663 568999999999988775322
Q ss_pred CCCCCCCe-eEE-EECCeEEEEc-ccC-------CCCceeEEEeCCC
Q 028925 141 TGSSSIGF-RFG-ILDGKLLLFS-LEE-------EPSYSTLLYDPNA 177 (202)
Q Consensus 141 ~~~~~~~~-~~~-~~~~~i~v~g-G~~-------~~~~~~~~yd~~~ 177 (202)
........ .++ .-+|++|+.. +.. .....++++|+..
T Consensus 93 ~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g 139 (297)
T 3g4e_A 93 NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH 139 (297)
T ss_dssp TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS
T ss_pred CCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC
Confidence 21111111 122 2367888743 111 1223688888754
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.52 E-value=1.1 Score=33.68 Aligned_cols=150 Identities=11% Similarity=0.153 Sum_probs=81.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCC--CeEEcCCC------CCCceeeeeEEE---CCEEEEEcCccCCCCCCcceE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTD--KWNLIESL------RRPRWGCFACSF---DGKLYVMGGRSSFTIGNSKFV 82 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~------~~~r~~~~~~~~---~~~iy~~gG~~~~~~~~~~~~ 82 (202)
+++||+....+ ..+.+||+..+ .-..+... ......+....+ +++||+..+.. ...+
T Consensus 101 ~g~l~v~d~~~------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~------~~~I 168 (329)
T 3fvz_A 101 DGNYWVTDVAL------HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC------NSRI 168 (329)
T ss_dssp TSCEEEEETTT------TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS------CCEE
T ss_pred CCCEEEEECCC------CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC------CCeE
Confidence 56788875432 46888998765 22222210 111112333332 68899986521 2468
Q ss_pred EEEeCCCCeEEeccC---------ccc-eeeeeEEE-C-CEEEEEeCCCCCeEEEEeCCCCcEEEec-cCCCCCCCCCee
Q 028925 83 DVYNPERHTWCQMKN---------GCV-MVTAHAVV-G-KKLFCMEWKNQRKLTIFDPEDNSWKMVP-VPLTGSSSIGFR 149 (202)
Q Consensus 83 ~~yd~~~~~W~~~~~---------~~~-~~~~~~~~-~-~~iyv~Gg~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~ 149 (202)
.+||+....-..+.. ... ...+.++. + +.||+... ....+.+||+++.+....- .+... ....+
T Consensus 169 ~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~-~~~~I~~~~~~~G~~~~~~~~~~~~--~~~~~ 245 (329)
T 3fvz_A 169 VQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR-ENGRIQCFKTDTKEFVREIKHASFG--RNVFA 245 (329)
T ss_dssp EEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET-TTTEEEEEETTTCCEEEEECCTTTT--TCEEE
T ss_pred EEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-CCCEEEEEECCCCcEEEEEeccccC--CCcce
Confidence 999965544333321 011 12333333 4 89999974 5678999999866655432 12111 22233
Q ss_pred EEEECCeEEEEcccC----CCCceeEEEeCCCC
Q 028925 150 FGILDGKLLLFSLEE----EPSYSTLLYDPNAA 178 (202)
Q Consensus 150 ~~~~~~~i~v~gG~~----~~~~~~~~yd~~~~ 178 (202)
++...+.+|+..|.. .....+.+||..++
T Consensus 246 ~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g 278 (329)
T 3fvz_A 246 ISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSG 278 (329)
T ss_dssp EEEETTEEEEEECCCCTTCSCCCCEEEEETTTC
T ss_pred eeecCCEEEEeCCCEEeccCCCcEEEEEEcCCC
Confidence 444446666666532 12237888998776
No 162
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=94.50 E-value=1.1 Score=33.51 Aligned_cols=141 Identities=9% Similarity=0.109 Sum_probs=73.1
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++++.|+.+ ..+.+||..+........+.........+.+ +++.++.|+.+ ..+.+||..+.+.
T Consensus 54 g~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------g~v~iwd~~~~~~ 120 (368)
T 3mmy_A 54 GNFLIAGSWA------NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-------KTAKMWDLSSNQA 120 (368)
T ss_dssp SEEEEEEETT------SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-------SEEEEEETTTTEE
T ss_pred ceEEEEECCC------CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-------CcEEEEEcCCCCc
Confidence 4777777654 3577888876333221111111111122222 66666666532 4689999988876
Q ss_pred EeccCccceeeeeE---EECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCce
Q 028925 93 CQMKNGCVMVTAHA---VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYS 169 (202)
Q Consensus 93 ~~~~~~~~~~~~~~---~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~ 169 (202)
...........+.. ..++.+++.++ ..+.+.+||..+.+-...- . .. ....++....+.+++.... ..
T Consensus 121 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~-~-~~--~~~~~~~~~~~~~~~~~~~----~~ 191 (368)
T 3mmy_A 121 IQIAQHDAPVKTIHWIKAPNYSCVMTGS-WDKTLKFWDTRSSNPMMVL-Q-LP--ERCYCADVIYPMAVVATAE----RG 191 (368)
T ss_dssp EEEEECSSCEEEEEEEECSSCEEEEEEE-TTSEEEEECSSCSSCSEEE-E-CS--SCEEEEEEETTEEEEEEGG----GC
T ss_pred eeeccccCceEEEEEEeCCCCCEEEEcc-CCCcEEEEECCCCcEEEEE-e-cC--CCceEEEecCCeeEEEeCC----Cc
Confidence 65443222223333 23566666664 5788999998776522221 1 11 1223344445555544322 24
Q ss_pred eEEEeCCC
Q 028925 170 TLLYDPNA 177 (202)
Q Consensus 170 ~~~yd~~~ 177 (202)
+..||...
T Consensus 192 i~~~~~~~ 199 (368)
T 3mmy_A 192 LIVYQLEN 199 (368)
T ss_dssp EEEEECSS
T ss_pred EEEEEecc
Confidence 66677655
No 163
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.49 E-value=1.3 Score=34.43 Aligned_cols=145 Identities=11% Similarity=0.053 Sum_probs=68.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
+++.++.|+.+ ..+.+||+.+.+-...-.-............++++++.|+.+ ..+.+||..+.+..
T Consensus 203 ~~~~l~s~s~D------~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D-------~~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 203 NGDHIVSASRD------KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND-------QTVRVWVVATKECK 269 (410)
T ss_dssp SSSEEEEEETT------SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTTCCEE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC-------CeEEEEECCCCcee
Confidence 45555666543 357888988765432211011111111112356777666643 35788887766533
Q ss_pred ecc-CccceeeeeEEE---------------------CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE
Q 028925 94 QMK-NGCVMVTAHAVV---------------------GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG 151 (202)
Q Consensus 94 ~~~-~~~~~~~~~~~~---------------------~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 151 (202)
..- .......+.... .+.+++.|+ ..+.+.+||..+..-...- ... ...-.+++
T Consensus 270 ~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs-~D~~i~iwd~~~~~~~~~~--~~h-~~~v~~v~ 345 (410)
T 1vyh_C 270 AELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS-RDKTIKMWDVSTGMCLMTL--VGH-DNWVRGVL 345 (410)
T ss_dssp EEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE-TTSEEEEEETTTTEEEEEE--ECC-SSCEEEEE
T ss_pred eEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe-CCCeEEEEECCCCceEEEE--ECC-CCcEEEEE
Confidence 211 111111111111 144555554 6788999998876532211 111 11111222
Q ss_pred E-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 152 I-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 152 ~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
. .+++.++.|+.. ..+.+||..+.
T Consensus 346 ~~~~g~~l~s~s~D---~~i~vwd~~~~ 370 (410)
T 1vyh_C 346 FHSGGKFILSCADD---KTLRVWDYKNK 370 (410)
T ss_dssp ECSSSSCEEEEETT---TEEEEECCTTS
T ss_pred EcCCCCEEEEEeCC---CeEEEEECCCC
Confidence 2 256666666532 26788887654
No 164
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=94.48 E-value=0.41 Score=36.78 Aligned_cols=151 Identities=14% Similarity=0.067 Sum_probs=72.7
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCC--CeEEcCCCCCCceeeeeEEE--C-CEEEEEcCccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTD--KWNLIESLRRPRWGCFACSF--D-GKLYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r~~~~~~~~--~-~~iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
++++++.|+.+ ..+.+||..+. ....+..+...........+ + +++++.|+.+ ..+.+||..
T Consensus 78 ~~~~l~~~~~d------g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-------g~v~iwd~~ 144 (416)
T 2pm9_A 78 NNKIIAGALDN------GSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN-------GEIFIWDMN 144 (416)
T ss_dssp SSSCEEEEESS------SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS-------SCEEBCBTT
T ss_pred CCCeEEEEccC------CeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC-------CeEEEEECC
Confidence 45555555542 35777888761 11122222111111122222 2 6666666643 358888887
Q ss_pred CCe------EE-ecc---CccceeeeeEEE-C-CEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCC---CCCCCeeEEEE
Q 028925 89 RHT------WC-QMK---NGCVMVTAHAVV-G-KKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTG---SSSIGFRFGIL 153 (202)
Q Consensus 89 ~~~------W~-~~~---~~~~~~~~~~~~-~-~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~---~~~~~~~~~~~ 153 (202)
+.+ -. .+. .......+.... + +.+++.++ ....+.+||..+.+-...-..... ....-..++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG-SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES-SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc-CCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC
Confidence 664 11 111 111111222222 3 46666665 577899999988765443211110 01112222222
Q ss_pred -C-CeEEEEcccCCCCceeEEEeCCCC
Q 028925 154 -D-GKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 154 -~-~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+ ..+++.++.......+.+||..+.
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 3 357777765433336888888764
No 165
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.47 E-value=1 Score=33.22 Aligned_cols=111 Identities=21% Similarity=0.136 Sum_probs=55.6
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCC--c--eeeeeE-EECC-EEEEEcCccCCCCC----CcceEEE
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRP--R--WGCFAC-SFDG-KLYVMGGRSSFTIG----NSKFVDV 84 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~--r--~~~~~~-~~~~-~iy~~gG~~~~~~~----~~~~~~~ 84 (202)
+.+|+.+..+ ..+++||+.+.+-...-+.+.+ + .-..++ .-++ .||+.......... ....+.+
T Consensus 46 ~~l~v~~~~~------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v 119 (337)
T 1pby_B 46 RIAYATVNKS------ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119 (337)
T ss_dssp SEEEEEETTT------TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEE
T ss_pred CEEEEEeCCC------CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEE
Confidence 3777776432 3689999988775432111110 0 111122 2245 56665311100000 1357999
Q ss_pred EeCCCCeEEeccCccceeeee-EEECCE-EEEEeCCCCCeEEEEeCCCCcEEE
Q 028925 85 YNPERHTWCQMKNGCVMVTAH-AVVGKK-LFCMEWKNQRKLTIFDPEDNSWKM 135 (202)
Q Consensus 85 yd~~~~~W~~~~~~~~~~~~~-~~~~~~-iyv~Gg~~~~~~~~yd~~~~~W~~ 135 (202)
||..+.+....-+........ ...+++ ||+. ...+.+||+.+.+-..
T Consensus 120 ~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~----~~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGL----GRDLHVMDPEAGTLVE 168 (337)
T ss_dssp EETTTTEEEEEEECCSSCCCEEECTTSSCEEEE----SSSEEEEETTTTEEEE
T ss_pred EECCCCcEEEEEeCCCCcceeEECCCCCEEEEe----CCeEEEEECCCCcEee
Confidence 999887654332211111222 223444 6665 3578999998876543
No 166
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.46 E-value=0.88 Score=38.51 Aligned_cols=145 Identities=10% Similarity=0.106 Sum_probs=79.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCC--CCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIES--LRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++||+.-.. ...++++|+....-+.+.. +..|+ .+++ .++.||+..-. ....++++++..
T Consensus 464 ~g~LY~tD~~------~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~------~~~~I~~~~~dG 528 (699)
T 1n7d_A 464 HSNIYWTDSV------LGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG------TPAKIKKGGLNG 528 (699)
T ss_dssp SSBCEECCTT------TSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS------SSCCEEBCCSSS
T ss_pred CCcEEEEecc------CCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC------CCCeEEEEeCCC
Confidence 4677775211 2457888887655444322 22332 2222 36778875311 124577777654
Q ss_pred CeEEeccCcc-ceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCC
Q 028925 90 HTWCQMKNGC-VMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEP 166 (202)
Q Consensus 90 ~~W~~~~~~~-~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~ 166 (202)
..-+.+.... ....++++ .+++||+... ....|+++|++...-+.+.. .........++++.++.||+... .
T Consensus 529 ~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~-~~~~I~~~d~dG~~~~~~~~-~~~~~~~P~glavd~~~lywtd~---~ 603 (699)
T 1n7d_A 529 VDIYSLVTENIQWPNGITLDLLSGRLYWVDS-KLHSISSIDVNGGNRKTILE-DEKRLAHPFSLAVFEDKVFWTDI---I 603 (699)
T ss_dssp CCCCEESCSSCSSCCCEEECTTTCCEEEEET-TTTEEEEECSSSSCCEEECC-CSSSCSSCCCCEEETTEEEEECS---T
T ss_pred CCeeEEEeCCCCCccEEEEeccCCEEEEEec-CCCeEEEEccCCCceEEEEe-cCCcCCCceEeEEECCEEEEEeC---C
Confidence 3322222111 11222333 2578999974 46789999987654444431 11122344566778899999873 2
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
...|.++|+.++
T Consensus 604 ~~~V~~~d~~~G 615 (699)
T 1n7d_A 604 NEAIFSANRLTG 615 (699)
T ss_dssp TTCEEEEETTTE
T ss_pred CCeEEEEEccCC
Confidence 347888888664
No 167
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.41 E-value=1.1 Score=33.44 Aligned_cols=132 Identities=13% Similarity=0.087 Sum_probs=71.9
Q ss_pred eeeEEEeCCCCCeEEcCCCCC------------------CceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 31 SSAEVYDPDTDKWNLIESLRR------------------PRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~------------------~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
..+++||+.+++++....... ...-..++.- +++||+.... ..+.++|+.+.
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~--------~~i~~~d~~~g 111 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY--------YHLSVVGSEGG 111 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT--------TEEEEECTTCE
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC--------CCEEEEeCCCC
Confidence 468899998877765421100 0011223333 5889987421 23788898876
Q ss_pred eEEeccC---c-cc-eeeeeEE-E-CCEEEEEeCC----------------CCCeEEEEeCCCCcEEEeccCCCCCCCCC
Q 028925 91 TWCQMKN---G-CV-MVTAHAV-V-GKKLFCMEWK----------------NQRKLTIFDPEDNSWKMVPVPLTGSSSIG 147 (202)
Q Consensus 91 ~W~~~~~---~-~~-~~~~~~~-~-~~~iyv~Gg~----------------~~~~~~~yd~~~~~W~~~~~~~~~~~~~~ 147 (202)
+.+.+.. . +. ......+ - ++.||+.... ....+++||+++.+.+.+.... ...
T Consensus 112 ~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~----~~p 187 (322)
T 2fp8_A 112 HATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKEL----HVP 187 (322)
T ss_dssp ECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEE----SCC
T ss_pred EEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCC----ccC
Confidence 6554431 1 11 1122222 3 5789997532 1257899999888766553111 111
Q ss_pred eeEEEE-CC-eEEEEcccCCCCceeEEEeCCC
Q 028925 148 FRFGIL-DG-KLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 148 ~~~~~~-~~-~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
..++.. ++ .||+.... ...+++|+++.
T Consensus 188 ~gia~~~dg~~lyv~d~~---~~~I~~~~~~~ 216 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFL---SHQIVKYWLEG 216 (322)
T ss_dssp CEEEECTTSSEEEEEEGG---GTEEEEEESSS
T ss_pred cceEECCCCCEEEEEeCC---CCeEEEEECCC
Confidence 233333 34 58886421 34788898875
No 168
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=94.36 E-value=0.94 Score=34.63 Aligned_cols=141 Identities=12% Similarity=0.061 Sum_probs=68.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++++++.|+.+ ..+.+||.....-..+.....+ ..... -+++.++.++.+ ..+.+||..+.+
T Consensus 119 ~~~~l~~~~~d------g~i~i~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~~ 182 (425)
T 1r5m_A 119 DGNSIVTGVEN------GELRLWNKTGALLNVLNFHRAP---IVSVKWNKDGTHIISMDVE-------NVTILWNVISGT 182 (425)
T ss_dssp TSSEEEEEETT------SCEEEEETTSCEEEEECCCCSC---EEEEEECTTSSEEEEEETT-------CCEEEEETTTTE
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeeccCCCcc---EEEEEECCCCCEEEEEecC-------CeEEEEECCCCc
Confidence 56666776653 3477788443333333321111 12222 256655565532 458888887775
Q ss_pred EEeccCcc-ce---------------eeeeE-EECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-E
Q 028925 92 WCQMKNGC-VM---------------VTAHA-VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-L 153 (202)
Q Consensus 92 W~~~~~~~-~~---------------~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~ 153 (202)
-...-... .. ..... ..++. +++++ ..+.+.+||..+.+-...-. .. ...-..++. .
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~g~i~~~d~~~~~~~~~~~--~~-~~~i~~~~~~~ 257 (425)
T 1r5m_A 183 VMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPG-PKGAIFVYQITEKTPTGKLI--GH-HGPISVLEFND 257 (425)
T ss_dssp EEEEECCC---------------CCCBSCCEEEETTE-EEEEC-GGGCEEEEETTCSSCSEEEC--CC-SSCEEEEEEET
T ss_pred EEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEc-CCCeEEEEEcCCCceeeeec--cC-CCceEEEEECC
Confidence 43322110 00 12222 23444 44554 56789999988764322211 11 111122232 2
Q ss_pred CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 154 DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 154 ~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+++.++.++.. ..+.+||..+.
T Consensus 258 ~~~~l~~~~~d---~~i~i~d~~~~ 279 (425)
T 1r5m_A 258 TNKLLLSASDD---GTLRIWHGGNG 279 (425)
T ss_dssp TTTEEEEEETT---SCEEEECSSSB
T ss_pred CCCEEEEEcCC---CEEEEEECCCC
Confidence 56666666532 25778887664
No 169
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.31 E-value=1 Score=32.59 Aligned_cols=145 Identities=7% Similarity=0.011 Sum_probs=79.4
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++||+.-.. ...+.++|+.+..-..+.+..... -+.++. .+++||+.... ...+.++|+....
T Consensus 47 ~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~-p~~ia~d~~~~~lyv~d~~-------~~~I~~~~~~g~~ 112 (267)
T 1npe_A 47 DKVVYWTDIS------EPSIGRASLHGGEPTTIIRQDLGS-PEGIALDHLGRTIFWTDSQ-------LDRIEVAKMDGTQ 112 (267)
T ss_dssp TTEEEEEETT------TTEEEEEESSSCCCEEEECTTCCC-EEEEEEETTTTEEEEEETT-------TTEEEEEETTSCS
T ss_pred CCEEEEEECC------CCEEEEEecCCCCcEEEEECCCCC-ccEEEEEecCCeEEEEECC-------CCEEEEEEcCCCC
Confidence 5689987532 246889998766543332111111 122233 25789987532 3468888886543
Q ss_pred EEeccCcc-ceeeeeEEE--CCEEEEEeCC-CCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE--CCeEEEEcccCC
Q 028925 92 WCQMKNGC-VMVTAHAVV--GKKLFCMEWK-NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEE 165 (202)
Q Consensus 92 W~~~~~~~-~~~~~~~~~--~~~iyv~Gg~-~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~ 165 (202)
-..+.+.. ......++. ++.||+.... ....+++++++...-+.+... ......+++.. +++||+...
T Consensus 113 ~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~---~~~~P~gia~d~~~~~lyv~d~--- 186 (267)
T 1npe_A 113 RRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD---NLGLPNGLTFDAFSSQLCWVDA--- 186 (267)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT---TCSCEEEEEEETTTTEEEEEET---
T ss_pred EEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC---CCCCCcEEEEcCCCCEEEEEEC---
Confidence 22222211 122233333 6899998742 246888998876544444211 11223344443 578998763
Q ss_pred CCceeEEEeCCCC
Q 028925 166 PSYSTLLYDPNAA 178 (202)
Q Consensus 166 ~~~~~~~yd~~~~ 178 (202)
....+.++|++..
T Consensus 187 ~~~~I~~~~~~g~ 199 (267)
T 1npe_A 187 GTHRAECLNPAQP 199 (267)
T ss_dssp TTTEEEEEETTEE
T ss_pred CCCEEEEEecCCC
Confidence 2347888998764
No 170
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.30 E-value=1.4 Score=33.92 Aligned_cols=64 Identities=8% Similarity=-0.030 Sum_probs=35.5
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCe-EEEEcccCCCCceeEEEeCCCC
Q 028925 109 GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGK-LLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~-i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
++.+++.|+ ..+.+.+||..+.+-...- .... ...-.+++.. +++ +++.|+.. ..+.+||..+.
T Consensus 258 ~~~~l~~~~-~dg~i~i~d~~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~~l~~g~~d---g~i~vwd~~~~ 323 (420)
T 3vl1_A 258 YGKYVIAGH-VSGVITVHNVFSKEQTIQL-PSKF-TCSCNSLTVDGNNANYIYAGYEN---GMLAQWDLRSP 323 (420)
T ss_dssp TTEEEEEEE-TTSCEEEEETTTCCEEEEE-CCTT-SSCEEEEEECSSCTTEEEEEETT---SEEEEEETTCT
T ss_pred CCCEEEEEc-CCCeEEEEECCCCceeEEc-cccc-CCCceeEEEeCCCCCEEEEEeCC---CeEEEEEcCCC
Confidence 566666664 5778999999876633322 1111 1112222222 444 66666542 36888888764
No 171
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=94.21 E-value=1.9 Score=35.20 Aligned_cols=151 Identities=15% Similarity=0.107 Sum_probs=72.3
Q ss_pred eeeEEEeCCCCCeEEcCCC-----------CCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE---ecc
Q 028925 31 SSAEVYDPDTDKWNLIESL-----------RRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC---QMK 96 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~-----------~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~---~~~ 96 (202)
.++.++|..+.+-...-+. +.++....+...++..+++... ....+.++|..+.+-. .++
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~------~~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK------ETGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET------TTTEEEEEECTTSSSCEEEEEE
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC------CCCeEEEEEecCCCcceeEEec
Confidence 3577889887664322111 1223333333333444444332 1356888887764311 222
Q ss_pred CccceeeeeEEECCE-EEEEeCCCCCeEEEEeCCCCcEEEe-ccCCCCCCCCCeeEEEE-CCeEEEEcccCCCCceeEEE
Q 028925 97 NGCVMVTAHAVVGKK-LFCMEWKNQRKLTIFDPEDNSWKMV-PVPLTGSSSIGFRFGIL-DGKLLLFSLEEEPSYSTLLY 173 (202)
Q Consensus 97 ~~~~~~~~~~~~~~~-iyv~Gg~~~~~~~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~~~~y 173 (202)
.....+......+++ +|+.. ...+.+.++|.++.+-... .....+....+..+..- ++.+|+.+... ...+.+|
T Consensus 322 ~~~~~~~~~~spdg~~l~va~-~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~--d~~V~v~ 398 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAA-NNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG--DGSISLI 398 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEE-GGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEE
T ss_pred cCcCccCceECCCCCEEEEEe-cCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCC--CceEEEE
Confidence 111111222333555 55554 3467899999998875543 21111111223333222 47888876322 2357778
Q ss_pred eCCCCCC--CcceeecccC
Q 028925 174 DPNAASG--SEWQTSKIKP 190 (202)
Q Consensus 174 d~~~~~~--~~W~~~~~~p 190 (202)
|.++.+. ..|+.+..++
T Consensus 399 d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 399 GTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp ECCTTTCTTTBTSEEEEEE
T ss_pred EeCCCCCchhcCeEEEEEE
Confidence 7766210 1377664443
No 172
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=94.21 E-value=1 Score=32.37 Aligned_cols=60 Identities=15% Similarity=0.110 Sum_probs=37.1
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCcEEEec----cCCCC------CCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCC
Q 028925 109 GKKLFCMEWKNQRKLTIFDPEDNSWKMVP----VPLTG------SSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPN 176 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~----~~~~~------~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~ 176 (202)
++++|++- -+..++||..+++-..-+ ...+. ....-+++.- .++++|++-|. ..|+||..
T Consensus 127 ~gk~yfFk---G~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~-----~ywr~d~~ 197 (225)
T 3oyo_A 127 GKEVYLFK---GNKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ-----NYVRIDFT 197 (225)
T ss_dssp TTEEEEEE---TTEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT-----EEEEEECC
T ss_pred CCcEEEEe---CCeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC-----EEEEEeCC
Confidence 68999995 457899998777655411 11111 1122222222 47999999754 57999988
No 173
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=94.20 E-value=1 Score=33.60 Aligned_cols=103 Identities=12% Similarity=0.092 Sum_probs=53.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCCC--CceeeeeE-----EECCEEEEEcCccCCCCCCcceEEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLRR--PRWGCFAC-----SFDGKLYVMGGRSSFTIGNSKFVDV 84 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~--~r~~~~~~-----~~~~~iy~~gG~~~~~~~~~~~~~~ 84 (202)
+++.++.|+.+ ..+.+||+.+.+ ......... .+.-..++ ..++++++.|+.+ ..+.+
T Consensus 128 ~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-------~~i~i 194 (357)
T 3i2n_A 128 GAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-------GDIKL 194 (357)
T ss_dssp CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-------SEEEE
T ss_pred CccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-------CeEEE
Confidence 44555555543 357888888765 333332221 11111111 1366777766532 46899
Q ss_pred EeCCCCeEEeccCccceeeeeEEE----CCEEEEEeCCCCCeEEEEeCCC
Q 028925 85 YNPERHTWCQMKNGCVMVTAHAVV----GKKLFCMEWKNQRKLTIFDPED 130 (202)
Q Consensus 85 yd~~~~~W~~~~~~~~~~~~~~~~----~~~iyv~Gg~~~~~~~~yd~~~ 130 (202)
||..+.+-................ ++..++.|+ ..+.+.+||..+
T Consensus 195 ~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 243 (357)
T 3i2n_A 195 FDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATS-LEGKFHVFDMRT 243 (357)
T ss_dssp EETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEE-STTEEEEEEEEE
T ss_pred EECccCceeeecCCCCceEEEEcCCCCCCCCEEEEEC-CCCeEEEEeCcC
Confidence 999887643332222222233332 456666654 567888888754
No 174
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=94.19 E-value=2.1 Score=35.66 Aligned_cols=139 Identities=12% Similarity=0.047 Sum_probs=74.0
Q ss_pred eeeeEEEeCCCC-CeEEcCCCCCCc----eeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCcccee
Q 028925 30 LSSAEVYDPDTD-KWNLIESLRRPR----WGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMV 102 (202)
Q Consensus 30 ~~~~~~yd~~t~-~W~~~~~~~~~r----~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~ 102 (202)
...++++|+.+. +.+.+....... .......- +|++++.+..+ ....++.+|........+.......
T Consensus 283 ~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~-----g~~~l~~~~~~~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 283 ECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD-----GWNHLYLYDTTGRLIRQVTKGEWEV 357 (706)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT-----SSCEEEEEETTSCEEEECCCSSSCE
T ss_pred eeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC-----CccEEEEEECCCCEEEecCCCCeEE
Confidence 457899999887 565442111110 01112223 77866555433 2356888887777777776433222
Q ss_pred ee--eEEEC-CEEEEEeCCC---CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE-EECCeEEEEcccC-CCCceeEEEe
Q 028925 103 TA--HAVVG-KKLFCMEWKN---QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG-ILDGKLLLFSLEE-EPSYSTLLYD 174 (202)
Q Consensus 103 ~~--~~~~~-~~iyv~Gg~~---~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG~~-~~~~~~~~yd 174 (202)
.. ....+ +.||+.+... ...++.+|.++...+.+.. . .....++ .-+++.+++.... .....++++|
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~--~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLTP---E--SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESCC---S--SSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceeccC---C--CceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 22 12223 4566665422 2478888988877665541 1 1112222 2356656554332 2223688888
Q ss_pred CCCC
Q 028925 175 PNAA 178 (202)
Q Consensus 175 ~~~~ 178 (202)
.+++
T Consensus 433 ~~~~ 436 (706)
T 2z3z_A 433 IGKG 436 (706)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 8776
No 175
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.16 E-value=1.4 Score=33.36 Aligned_cols=133 Identities=11% Similarity=0.115 Sum_probs=71.0
Q ss_pred eCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCc----cceeeeeEEECC
Q 028925 37 DPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNG----CVMVTAHAVVGK 110 (202)
Q Consensus 37 d~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~----~~~~~~~~~~~~ 110 (202)
.-...+|+.+.. +.... ...+.+ ++.+|++|-. ..++..+-...+|+.+... ......+...++
T Consensus 21 ~d~g~~W~~~~~-~~~~~-~~~v~~~~~~~~~~~G~~--------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~ 90 (327)
T 2xbg_A 21 ALDYNPWEAIQL-PTTAT-ILDMSFIDRHHGWLVGVN--------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGN 90 (327)
T ss_dssp BCSSCCEEEEEC-SCSSC-EEEEEESSSSCEEEEETT--------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETT
T ss_pred CCCCCCceEeec-CCCCc-EEEEEECCCCcEEEEcCC--------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCC
Confidence 334568988863 22222 222333 5678886531 2355444445689998621 122333444567
Q ss_pred EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCCCCCcceeeccc
Q 028925 111 KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAASGSEWQTSKIK 189 (202)
Q Consensus 111 ~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~~~~ 189 (202)
.+|++| ....+++-+-.-.+|+.+..+...+ .....++. -++++|+.+.. + .+++-+-.-. +|+.+...
T Consensus 91 ~~~~~g--~~g~i~~S~DgG~tW~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~---g-~v~~S~DgG~---tW~~~~~~ 160 (327)
T 2xbg_A 91 EGWIVG--EPPIMLHTTDGGQSWSQIPLDPKLP-GSPRLIKALGNGSAEMITNV---G-AIYRTKDSGK---NWQALVQE 160 (327)
T ss_dssp EEEEEE--ETTEEEEESSTTSSCEECCCCTTCS-SCEEEEEEEETTEEEEEETT---C-CEEEESSTTS---SEEEEECS
T ss_pred eEEEEE--CCCeEEEECCCCCCceECccccCCC-CCeEEEEEECCCCEEEEeCC---c-cEEEEcCCCC---CCEEeecC
Confidence 899886 3445665444567999986331111 11233443 46888887632 2 3444333334 79998543
No 176
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.06 E-value=1.3 Score=33.19 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=51.2
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++++++.|+.+ ..+.+||..++++.....+........... -++++++.|+.+ ..+.+||..+.+
T Consensus 63 ~~~~l~~~~~d------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~v~i~d~~~~~ 129 (372)
T 1k8k_C 63 DSNRIVTCGTD------RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGS-------RVISICYFEQEN 129 (372)
T ss_dssp TTTEEEEEETT------SCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETT-------SSEEEEEEETTT
T ss_pred CCCEEEEEcCC------CeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCC-------CEEEEEEecCCC
Confidence 45555555543 357788888877655432222222222222 256666666543 346666655443
Q ss_pred -EEecc----CccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCC
Q 028925 92 -WCQMK----NGCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPE 129 (202)
Q Consensus 92 -W~~~~----~~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~ 129 (202)
|.... +.......... .++..++.|+ ..+.+.+||..
T Consensus 130 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~~~d~~ 172 (372)
T 1k8k_C 130 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGS-CDFKCRIFSAY 172 (372)
T ss_dssp TEEEEEEECTTCCSCEEEEEECTTSSEEEEEE-TTSCEEEEECC
T ss_pred cceeeeeeecccCCCeeEEEEcCCCCEEEEEc-CCCCEEEEEcc
Confidence 22221 11122222222 2556666664 56788999954
No 177
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.01 E-value=1.3 Score=32.74 Aligned_cols=102 Identities=15% Similarity=0.096 Sum_probs=54.2
Q ss_pred eeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCE-EEEEcCccCCCCCCcceEEEEeCCCCeEEecc---Cc-cceeee
Q 028925 30 LSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGK-LYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK---NG-CVMVTA 104 (202)
Q Consensus 30 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~-~~~~~~ 104 (202)
...+++||+.+++.+.+.. .......+..-+++ ||+....... .....+++||...+...... .. .....+
T Consensus 168 ~~~v~~~d~~~g~~~~~~~--~~~p~gl~~spdg~~lyv~~~~~~~--~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 168 HHSVYRLPPDGSPLQRMAD--LDHPNGLAFSPDEQTLYVSQTPEQG--HGSVEITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp CEEEEEECSSSCCCEEEEE--ESSEEEEEECTTSSEEEEEECCC-----CCCEEEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred CCeEEEEcCCCCcEEEEec--CCCCcceEEcCCCCEEEEEecCCcC--CCCCEEEEEEecCCCccCCeEEEECCCCCCCe
Confidence 3579999998888876541 11111112223554 7776432110 01246888987665422111 10 111112
Q ss_pred eE-EECCEEEEEeCCCCCeEEEEeCCCCcEEEecc
Q 028925 105 HA-VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPV 138 (202)
Q Consensus 105 ~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~ 138 (202)
.. -.++.||+.. ...+.+||++...-..+..
T Consensus 244 i~~d~~G~lwv~~---~~gv~~~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 244 FCVDRGGWLWSSS---GTGVCVFDSDGQLLGHIPT 275 (305)
T ss_dssp EEECTTSCEEECC---SSEEEEECTTSCEEEEEEC
T ss_pred EEECCCCCEEEec---CCcEEEECCCCCEEEEEEC
Confidence 22 2367788764 4569999998776666653
No 178
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=93.97 E-value=1.1 Score=31.49 Aligned_cols=141 Identities=16% Similarity=0.092 Sum_probs=76.6
Q ss_pred EEEECCEEEEEcCcCCCCCceeeeEEEeCCC--CCeEE--c----CCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcc
Q 028925 10 CAEVNGKIYAVGGYGMDGESLSSAEVYDPDT--DKWNL--I----ESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSK 80 (202)
Q Consensus 10 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~--~----~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~ 80 (202)
++.+++++|++=|. .+|+++... ..... + +.||... .++... .++++|++-|.
T Consensus 12 i~~~~g~~yfFkg~--------~~Wr~~~~~~~~~~~p~~Is~~w~glP~~I-DAa~~~~~~~~~yfFkG~--------- 73 (195)
T 1itv_A 12 IAEIGNQLYLFKDG--------KYWRFSEGRGSRPQGPFLIADKWPALPRKL-DSVFEEPLSKKLFFFSGR--------- 73 (195)
T ss_dssp EEEETTEEEEEETT--------EEEEECCSSSCCCEEEEEHHHHCTTSCSSC-SEEEECTTTCCEEEEETT---------
T ss_pred EEEeCCEEEEEECC--------EEEEEECCccccCCCcEEhhhccCCCCCCc-cEEEEECCCCeEEEEeCC---------
Confidence 44579999999763 478888765 23321 2 2344322 222222 37889999763
Q ss_pred eEEEEeCCCCeEEe---cc----Ccc-ceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCCcEEE-----eccCCCCCCCC
Q 028925 81 FVDVYNPERHTWCQ---MK----NGC-VMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDNSWKM-----VPVPLTGSSSI 146 (202)
Q Consensus 81 ~~~~yd~~~~~W~~---~~----~~~-~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-----~~~~~~~~~~~ 146 (202)
..++|+..+ -.. +. |.. ....++. ..++++|++-| +..+.||..+++=.. +....++-...
T Consensus 74 ~yw~~~~~~--~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg---~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~ 148 (195)
T 1itv_A 74 QVWVYTGAS--VLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG---RRLWRFDVKAQMVDPRSASEVDRMFPGVPLD 148 (195)
T ss_dssp EEEEEETTE--EEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET---TEEEEEETTTTEECGGGCEEHHHHSTTSCSS
T ss_pred EEEEEcCCc--cCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC---CEEEEEeCCcccccCCCccChhhcCCCCCCC
Confidence 477777542 121 11 110 0112222 23689999954 578999987754211 11111111122
Q ss_pred CeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 147 GFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 147 ~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
-.++...++.+|.+-|. ..+.||..+.
T Consensus 149 idaa~~~~g~~Yffkg~-----~y~~~~~~~~ 175 (195)
T 1itv_A 149 THDVFQFREKAYFCQDR-----FYWRVSSRSE 175 (195)
T ss_dssp CSEEEEETTEEEEEETT-----EEEEEECCTT
T ss_pred CCEEEEeCCeEEEEeCC-----EEEEEECCcc
Confidence 22344567999998754 5788888765
No 179
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.95 E-value=2.4 Score=35.36 Aligned_cols=147 Identities=13% Similarity=0.057 Sum_probs=76.7
Q ss_pred eeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCC-eEEeccCc--cce---
Q 028925 30 LSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERH-TWCQMKNG--CVM--- 101 (202)
Q Consensus 30 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~-~W~~~~~~--~~~--- 101 (202)
...++++|+.+.+-..+............+. -+|+.++++..+.. .....+.++|+.+. ....+... ...
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~--~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~ 311 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRA--QNECKVNAYDAETGRFVRTLFVETDKHYVEP 311 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTT--SCEEEEEEEETTTCCEEEEEEEEECSSCCCC
T ss_pred eeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCC--CCeeEEEEEECCCCceeeEEEEccCCCeECc
Confidence 4679999999887665543211212222232 36664444332211 13457899999888 66655411 110
Q ss_pred -eeeeEEE--CCEEEEEeC-CCCCeEEEEeCCCCcEEEeccCCCCCCCCCe-e-EEE-ECC-eEEEEcccCCC-CceeEE
Q 028925 102 -VTAHAVV--GKKLFCMEW-KNQRKLTIFDPEDNSWKMVPVPLTGSSSIGF-R-FGI-LDG-KLLLFSLEEEP-SYSTLL 172 (202)
Q Consensus 102 -~~~~~~~--~~~iyv~Gg-~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~-~~~-~~~-~i~v~gG~~~~-~~~~~~ 172 (202)
....... ++++++.+. .....++.+|........+... .... . ++. -++ .|++.+....+ ...++.
T Consensus 312 ~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~-----~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 312 LHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKG-----EWEVTNFAGFDPKGTRLYFESTEASPLERHFYC 386 (706)
T ss_dssp CSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCS-----SSCEEEEEEECTTSSEEEEEESSSCTTCBEEEE
T ss_pred cCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCC-----CeEEEeeeEEcCCCCEEEEEecCCCCceEEEEE
Confidence 1112333 677655553 2245677788766666666421 1111 1 122 244 56665544322 247888
Q ss_pred EeCCCCCCCcceee
Q 028925 173 YDPNAASGSEWQTS 186 (202)
Q Consensus 173 yd~~~~~~~~W~~~ 186 (202)
+|.+++ ..+.+
T Consensus 387 ~d~~~~---~~~~l 397 (706)
T 2z3z_A 387 IDIKGG---KTKDL 397 (706)
T ss_dssp EETTCC---CCEES
T ss_pred EEcCCC---Cceec
Confidence 888876 65555
No 180
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=93.87 E-value=0.38 Score=38.59 Aligned_cols=96 Identities=18% Similarity=0.242 Sum_probs=52.4
Q ss_pred ECCEEEEEcCccCCCCCCcceEEEEeCCCC---------eEEeccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCC
Q 028925 61 FDGKLYVMGGRSSFTIGNSKFVDVYNPERH---------TWCQMKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDN 131 (202)
Q Consensus 61 ~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~---------~W~~~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~ 131 (202)
.+|++|++-|. ..+++|...+ .|..++ ....++...++++|++- .+.+++|+....
T Consensus 268 ~~G~tYFFKg~---------~yWR~~~~~~~~~p~~Is~~WpglP---~~IDAAf~~~~~~yfFk---G~~yw~f~~~~g 332 (460)
T 1qhu_A 268 NHGATYVFSGS---------HYWRLDTNRDGWHSWPIAHQWPQGP---STVDAAFSWEDKLYLIQ---DTKVYVFLTKGG 332 (460)
T ss_dssp TTCCEEEEETT---------EEEECTTGGGCCCCEEGGGTCTTSC---SSCSEEEEETTEEEEEE---TTEEEEEECSBS
T ss_pred CCCeEEEEeCC---------EEEEEecCCCCcCccchhhhccCCC---CCCcEEEEECCeEEEEe---CCEEEEEeCCCC
Confidence 47899998663 3555554332 233333 22344445578999994 456888886531
Q ss_pred cEEEe-------c--cCCCCC---CCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCC
Q 028925 132 SWKMV-------P--VPLTGS---SSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 132 ~W~~~-------~--~~~~~~---~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
.+.. . ...+.. .+--+++.. .++++|++-|. ..|+||...
T Consensus 333 -~~~~~GyPK~I~~~lGlp~~~~~~~IDAA~~~~~~~ktyfFkG~-----~ywryd~~~ 385 (460)
T 1qhu_A 333 -YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR-----RLWWLDLKS 385 (460)
T ss_dssp -CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT-----EEEEEEGGG
T ss_pred -ceecCCCCeEHHHhccCCCccccCcccEEEEeCCCCEEEEEECC-----EEEEEECCC
Confidence 1111 1 011111 112222222 36899999754 688898764
No 181
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.86 E-value=1.2 Score=31.87 Aligned_cols=157 Identities=12% Similarity=0.032 Sum_probs=77.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEE-EcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYV-MGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~-~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++.+++++... .....+|.+|..+++-..+..... .......-+++.++ .+..+ ....++.+|..+.+.
T Consensus 95 dg~~l~~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~spdg~~l~~~~~~~-----~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 95 DGALYAISDKVE--FGKSAIYLLPSTGGTPRLMTKNLP--SYWHGWSPDGKSFTYCGIRD-----QVFDIYSMDIDSGVE 165 (297)
T ss_dssp TSSEEEEEECTT--TSSCEEEEEETTCCCCEECCSSSS--EEEEEECTTSSEEEEEEEET-----TEEEEEEEETTTCCE
T ss_pred CCCEEEEEEeCC--CCcceEEEEECCCCceEEeecCCC--ccceEECCCCCEEEEEECCC-----CceEEEEEECCCCcc
Confidence 455445544221 123568889888777655543221 11111122555444 44322 123577777877776
Q ss_pred EeccCccceeeeeE-EECCE-EEEEeC-CCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCC---
Q 028925 93 CQMKNGCVMVTAHA-VVGKK-LFCMEW-KNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEE--- 165 (202)
Q Consensus 93 ~~~~~~~~~~~~~~-~~~~~-iyv~Gg-~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~--- 165 (202)
..+........... ..+++ |++.+. .....++.++........+... . .....+.. .+++.+++++...
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~--~~~~~~~~s~dg~~l~~~~~~~~~~ 241 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS--A--YGDWFPHPSPSGDKVVFVSYDADVF 241 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC--S--EEEEEEEECTTSSEEEEEEEETTCC
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC--C--cccCCeEECCCCCEEEEEEcCCCCC
Confidence 66653322222222 23554 444442 3345677777777766665421 1 11111222 2565555443321
Q ss_pred -----CCceeEEEeCCCCCCCcceee
Q 028925 166 -----PSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 166 -----~~~~~~~yd~~~~~~~~W~~~ 186 (202)
....+++||.+++ +.+.+
T Consensus 242 ~~~~~~~~~l~~~d~~~~---~~~~~ 264 (297)
T 2ojh_A 242 DHPRDLDVRVQLMDMDGG---NVETL 264 (297)
T ss_dssp SCCSSEEEEEEEEETTSC---SCEEE
T ss_pred cccccCceEEEEEecCCC---Cceee
Confidence 1236899999887 66554
No 182
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.74 E-value=2.3 Score=34.44 Aligned_cols=143 Identities=9% Similarity=-0.001 Sum_probs=71.4
Q ss_pred EEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCce---eeeeEE--EC-CEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 17 IYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRW---GCFACS--FD-GKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 17 iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~---~~~~~~--~~-~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
+++.|+.+ ..+.+||..+.+-.. .+..... ...... -+ +++++.|+.+ ..+.+||..+.
T Consensus 175 ~l~~~~~d------~~v~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~ 239 (615)
T 1pgu_A 175 RSMTVGDD------GSVVFYQGPPFKFSA--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSD-------RKISCFDGKSG 239 (615)
T ss_dssp EEEEEETT------TEEEEEETTTBEEEE--EECSSSCTTCCEEEEEECSTTCCEEEEEETT-------CCEEEEETTTC
T ss_pred EEEEEeCC------CcEEEEeCCCcceee--eecccCCCCceEEEEEECCCCCCEEEEEeCC-------CeEEEEECCCC
Confidence 55555432 357788876544322 2221111 122222 25 6777766543 46889998776
Q ss_pred eEEecc-----CccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEec-cCCCCCCCCCeeEEEECCeEEEEcccC
Q 028925 91 TWCQMK-----NGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVP-VPLTGSSSIGFRFGILDGKLLLFSLEE 164 (202)
Q Consensus 91 ~W~~~~-----~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~~~~~i~v~gG~~ 164 (202)
+....- ............++..++.++ ..+.+.+||..+.+-...- .+..........+...++..++.|+..
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 318 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVG-ADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 318 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEESSSSEEEEEE-TTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETT
T ss_pred CEeEEecccccccCCceEEEEEcCCCEEEEEc-CCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECC
Confidence 543322 111111222222666666664 5678999999877644432 111111111222333366666666442
Q ss_pred CCCceeEEEeCCCC
Q 028925 165 EPSYSTLLYDPNAA 178 (202)
Q Consensus 165 ~~~~~~~~yd~~~~ 178 (202)
..+.+||..+.
T Consensus 319 ---g~i~~~d~~~~ 329 (615)
T 1pgu_A 319 ---GTLNFYELGHD 329 (615)
T ss_dssp ---SCEEEEETTEE
T ss_pred ---CCEEEEECCCC
Confidence 25778887653
No 183
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=93.73 E-value=1.5 Score=32.45 Aligned_cols=100 Identities=10% Similarity=0.098 Sum_probs=52.4
Q ss_pred CCE-EEEEcCcCCCCCceeeeEEEeC-CCCCeEEcCC--CCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGK-IYAVGGYGMDGESLSSAEVYDP-DTDKWNLIES--LRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~-iyv~GG~~~~~~~~~~~~~yd~-~t~~W~~~~~--~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++ .++.|+.+ ..+.+||+ .+.+-..+.. ........ ....+.+++.++.+ ..+.+||..+
T Consensus 67 ~~~~~l~~~~~d------g~i~~wd~~~~~~~~~~~~~~~~~~v~~l--~~~~~~~l~s~~~d-------~~i~iwd~~~ 131 (342)
T 1yfq_A 67 NTDLQIYVGTVQ------GEILKVDLIGSPSFQALTNNEANLGICRI--CKYGDDKLIAASWD-------GLIEVIDPRN 131 (342)
T ss_dssp SSSEEEEEEETT------SCEEEECSSSSSSEEECBSCCCCSCEEEE--EEETTTEEEEEETT-------SEEEEECHHH
T ss_pred CCCcEEEEEcCC------CeEEEEEeccCCceEeccccCCCCceEEE--EeCCCCEEEEEcCC-------CeEEEEcccc
Confidence 566 66666643 35888999 8877766554 32222222 22225555555532 4578887654
Q ss_pred Ce-------EEecc--CccceeeeeEEECCEEEEEeCCCCCeEEEEeCCC
Q 028925 90 HT-------WCQMK--NGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPED 130 (202)
Q Consensus 90 ~~-------W~~~~--~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~ 130 (202)
.. .+.+. .......++....+.+ ++++ ..+.+.+||..+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~-~d~~i~i~d~~~ 179 (342)
T 1yfq_A 132 YGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL-IVGM-NNSQVQWFRLPL 179 (342)
T ss_dssp HTTBCEEEEESCSSSSSSCCCEEEEEECSSEE-EEEE-STTEEEEEESSC
T ss_pred cccccccccCCeeeEEeeCCceEEEEecCCcE-EEEe-CCCeEEEEECCc
Confidence 00 11121 1112223333445553 3443 567899999887
No 184
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=93.73 E-value=1.7 Score=36.05 Aligned_cols=121 Identities=13% Similarity=0.157 Sum_probs=69.3
Q ss_pred eeeEEECCEEEEEcCccCCCCCCcceEEEEeC-CCC--eEEeccCccc----------eeeeeEE--ECCE----EEEEe
Q 028925 56 CFACSFDGKLYVMGGRSSFTIGNSKFVDVYNP-ERH--TWCQMKNGCV----------MVTAHAV--VGKK----LFCME 116 (202)
Q Consensus 56 ~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~-~~~--~W~~~~~~~~----------~~~~~~~--~~~~----iyv~G 116 (202)
.+-++.++.||+.+.. ...++.+|. .+. .|+.-..... ...+.++ .+++ ||+..
T Consensus 56 ~tP~v~~g~vyv~~~~-------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t 128 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF-------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ 128 (599)
T ss_dssp SCCEEETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC
T ss_pred eccEEECCEEEEEeCC-------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc
Confidence 3445679999998642 235888888 655 5877542211 0122344 5667 88763
Q ss_pred CCCCCeEEEEeCCCCc--EEEeccCCCCCCCCCeeEEEECCeEEEEccc--CCCCceeEEEeCCCCCCCcceee
Q 028925 117 WKNQRKLTIFDPEDNS--WKMVPVPLTGSSSIGFRFGILDGKLLLFSLE--EEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 117 g~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~--~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
....++.+|.++.+ |+.-.............-++.+++||+-.+. ......++.||.+++. -.|+.-
T Consensus 129 --~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~-~~W~~~ 199 (599)
T 1w6s_A 129 --LDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGE-QVWRAY 199 (599)
T ss_dssp --TTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCC-EEEEEE
T ss_pred --CCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCc-EEEEEc
Confidence 45789999987776 8864311111011122334568888874321 1123479999998762 147654
No 185
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=93.71 E-value=2.1 Score=33.92 Aligned_cols=143 Identities=13% Similarity=0.143 Sum_probs=74.7
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE-
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC- 93 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~- 93 (202)
+.||+.-.. ..+.++|+.+++.+.+.. ...+-...+..-+|+||+...... .....+..++... .+.
T Consensus 153 g~Lyv~D~~-------~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~---~~~~gv~~~~~~~-~~~~ 220 (433)
T 4hw6_A 153 DDLYWVGQR-------DAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSS---DTNTGIYLFTRAS-GFTE 220 (433)
T ss_dssp CEEEEECBT-------SCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSC---TTSEEEEEECGGG-TTCC
T ss_pred CEEEEEeCC-------CCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCC---cccceEEEEECCC-Ceec
Confidence 799998321 579999998888877654 222222222234667888743211 0123455555432 121
Q ss_pred --eccCccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcE-EEeccCCCCCCCCCeeEEEE--CCeEEEEcccCCC
Q 028925 94 --QMKNGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSW-KMVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEEP 166 (202)
Q Consensus 94 --~~~~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~~ 166 (202)
.++... .....++. ++.||+... ....+++||+++.+- ..+...... .....++.. ++.||+.- ..
T Consensus 221 ~~~~~~~~-~P~giavd~~~G~lyv~d~-~~~~V~~~d~~~g~~~~~~~~~~~~--~~~~~ia~dpdG~~LYvad---~~ 293 (433)
T 4hw6_A 221 RLSLCNAR-GAKTCAVHPQNGKIYYTRY-HHAMISSYDPATGTLTEEEVMMDTK--GSNFHIVWHPTGDWAYIIY---NG 293 (433)
T ss_dssp EEEEEECS-SBCCCEECTTTCCEEECBT-TCSEEEEECTTTCCEEEEEEECSCC--SSCEEEEECTTSSEEEEEE---TT
T ss_pred cccccccC-CCCEEEEeCCCCeEEEEEC-CCCEEEEEECCCCeEEEEEeccCCC--CCcccEEEeCCCCEEEEEe---CC
Confidence 111111 11222232 678998753 456899999987765 333211111 122234433 34599875 23
Q ss_pred CceeEEEeCC
Q 028925 167 SYSTLLYDPN 176 (202)
Q Consensus 167 ~~~~~~yd~~ 176 (202)
.+.+++++..
T Consensus 294 ~~~I~~~~~d 303 (433)
T 4hw6_A 294 KHCIYRVDYN 303 (433)
T ss_dssp TTEEEEEEBC
T ss_pred CCEEEEEeCC
Confidence 4478886654
No 186
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=93.71 E-value=0.83 Score=34.07 Aligned_cols=77 Identities=12% Similarity=0.190 Sum_probs=38.1
Q ss_pred EEEEEeCCCCCeEEEEeCCC---CcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCC-CCCCCccee
Q 028925 111 KLFCMEWKNQRKLTIFDPED---NSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPN-AASGSEWQT 185 (202)
Q Consensus 111 ~iyv~Gg~~~~~~~~yd~~~---~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~-~~~~~~W~~ 185 (202)
.+++.|+ ..+.+.+||..+ ..|......... ..-.+++. .++++++.++.. ..+.+|+.. .+ .|..
T Consensus 229 ~~las~s-~D~~v~iw~~~~~~~~~~~~~~~~~~~--~~v~~v~~sp~g~~las~~~D---~~v~lw~~~~~g---~~~~ 299 (316)
T 3bg1_A 229 STIASCS-QDGRVFIWTCDDASSNTWSPKLLHKFN--DVVWHVSWSITANILAVSGGD---NKVTLWKESVDG---QWVC 299 (316)
T ss_dssp CEEEEEE-TTCEEEEEECSSTTCCCCBCCEEEECS--SCEEEEEECTTTCCEEEEESS---SCEEEEEECTTS---CEEE
T ss_pred ceEEEEc-CCCeEEEEEccCccccchhhhhhhcCC--CcEEEEEEcCCCCEEEEEcCC---CeEEEEEECCCC---cEEE
Confidence 4555554 677888998765 334321100001 11122222 256777776543 257777765 34 7999
Q ss_pred ecccCCceeee
Q 028925 186 SKIKPSGLCLC 196 (202)
Q Consensus 186 ~~~~p~~~~~~ 196 (202)
+..+..+-..+
T Consensus 300 ~~~~~~~~~~~ 310 (316)
T 3bg1_A 300 ISDVNKGQGSV 310 (316)
T ss_dssp EEECC------
T ss_pred eeeccCCCCce
Confidence 87776554433
No 187
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=93.67 E-value=0.22 Score=37.93 Aligned_cols=104 Identities=14% Similarity=0.194 Sum_probs=46.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC-eEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK-WNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
++++++.|+.+ ..+.+||+.+.+ |.....+.........+.+ ++++++.|+.+ ..+.+||..+.
T Consensus 66 ~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~~ 132 (377)
T 3dwl_C 66 KSNRIVTCSQD------RNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGA-------RVISVCYFEQE 132 (377)
T ss_dssp TTCCEEEEETT------SSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESS-------SCEEECCC---
T ss_pred CCCEEEEEeCC------CeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecC-------CeEEEEEECCc
Confidence 45666666543 357888888776 4433222222212222222 56666666543 35788887766
Q ss_pred e-EEecc---C-ccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCC
Q 028925 91 T-WCQMK---N-GCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDN 131 (202)
Q Consensus 91 ~-W~~~~---~-~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~ 131 (202)
+ |.... . .......... .++.+++.|+ ..+.+.+||..+.
T Consensus 133 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~ 178 (377)
T 3dwl_C 133 NDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC-ADRKAYVLSAYVR 178 (377)
T ss_dssp --CCCCEEECSSCCSCEEEEEECTTSSEEEEEE-SSSCEEEEEECCS
T ss_pred ccceeeeEeecccCCCeEEEEEcCCCCEEEEEe-CCCEEEEEEEEec
Confidence 4 32222 1 2222222222 2556666664 5677888887543
No 188
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=93.66 E-value=1.8 Score=33.11 Aligned_cols=147 Identities=9% Similarity=0.097 Sum_probs=73.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++.+++.|+.+ ..+.+||+.... -.......... ...+..-+++.++.|+.+ ..+.+||..+.+
T Consensus 217 ~~~~l~sgs~D------~~v~~wd~~~~~~~~~~~~~h~~~v-~~v~~~p~~~~l~s~s~D-------~~i~lwd~~~~~ 282 (380)
T 3iz6_a 217 NANMFISGSCD------TTVRLWDLRITSRAVRTYHGHEGDI-NSVKFFPDGQRFGTGSDD-------GTCRLFDMRTGH 282 (380)
T ss_dssp SCCEEEEEETT------SCEEEEETTTTCCCCEEECCCSSCC-CEEEECTTSSEEEEECSS-------SCEEEEETTTTE
T ss_pred CCCEEEEEECC------CeEEEEECCCCCcceEEECCcCCCe-EEEEEecCCCeEEEEcCC-------CeEEEEECCCCc
Confidence 45666666654 347778875321 11221111111 111112266777776643 468889988765
Q ss_pred EEecc---Ccc------ceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEE-eccCCCCCCCCCeeEE-EECCeEEEE
Q 028925 92 WCQMK---NGC------VMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKM-VPVPLTGSSSIGFRFG-ILDGKLLLF 160 (202)
Q Consensus 92 W~~~~---~~~------~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~-~~~~~i~v~ 160 (202)
-...- +.. .....+...++.+++.|+ ..+.+.+||..+..-.. +..........-.+++ ..+++.++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~-~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 283 QLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY-SNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp EEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC-TTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred EEEEecccccccccccCceEEEEECCCCCEEEEEE-CCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE
Confidence 33221 100 011112334677777765 67889999987766443 2211111111112222 236777777
Q ss_pred cccCCCCceeEEEeCCCC
Q 028925 161 SLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 161 gG~~~~~~~~~~yd~~~~ 178 (202)
|+.. ..+.+|+....
T Consensus 362 gs~D---~~i~iW~~~~~ 376 (380)
T 3iz6_a 362 GSWD---KNLKIWAFSGH 376 (380)
T ss_dssp ECTT---SCEEEEECCSS
T ss_pred eeCC---CCEEEEecCCC
Confidence 7643 25777777653
No 189
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=93.65 E-value=0.048 Score=42.30 Aligned_cols=142 Identities=11% Similarity=0.062 Sum_probs=58.1
Q ss_pred EECCEEEEEcCcCCCCCceeeeEEEeCCCCC--eEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 12 EVNGKIYAVGGYGMDGESLSSAEVYDPDTDK--WNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 12 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+.++.||+.+.. ..++.+|..+.+ |+.... + .....+..++++|+.++. ...++++|..+
T Consensus 7 v~~~~v~~gs~d-------g~v~a~d~~tG~~~W~~~~~---~-~~s~p~~~~g~~~v~~s~-------dg~l~a~d~~t 68 (369)
T 2hz6_A 7 LPETLLFVSTLD-------GSLHAVSKRTGSIKWTLKED---P-VLQVPTHVEEPAFLPDPN-------DGSLYTLGSKN 68 (369)
T ss_dssp -CTTEEEEEETT-------SEEEEEETTTCCEEEEEECC---C-SCCCC-----CCEEECTT-------TCCEEEC----
T ss_pred eeCCEEEEEcCC-------CEEEEEECCCCCEEEEecCC---C-ceecceEcCCCEEEEeCC-------CCEEEEEECCC
Confidence 446777776431 258889988776 765431 1 112233456778877642 24588999865
Q ss_pred C--eEEeccCccce-eeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCc--EEEeccCCCCCCCCCeeEEEECCeEEEEccc
Q 028925 90 H--TWCQMKNGCVM-VTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNS--WKMVPVPLTGSSSIGFRFGILDGKLLLFSLE 163 (202)
Q Consensus 90 ~--~W~~~~~~~~~-~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~ 163 (202)
. .|..-...+.. ..+.++ .++.||+.+ ....++.+|+++.+ |+.-... . ...+..++.||+.. .
T Consensus 69 G~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~--~dg~v~a~D~~tG~~~w~~~~~~-~------~~~~p~~~~v~~~~-~ 138 (369)
T 2hz6_A 69 NEGLTKLPFTIPELVQASPCRSSDGILYMGK--KQDIWYVIDLLTGEKQQTLSSAF-A------DSLSPSTSLLYLGR-T 138 (369)
T ss_dssp -CCSEECSCCHHHHHTTCSCC-----CCCCE--EEEEEEEECCC-----------------------------EEEEE-E
T ss_pred CceeeeeeccCccccccCceEecCCEEEEEe--CCCEEEEEECCCCcEEEEecCCC-c------ccccccCCEEEEEe-c
Confidence 4 45532211111 111122 455665432 35678899987664 6654311 0 01112455566532 1
Q ss_pred CCCCceeEEEeCCCCCCCccee
Q 028925 164 EEPSYSTLLYDPNAASGSEWQT 185 (202)
Q Consensus 164 ~~~~~~~~~yd~~~~~~~~W~~ 185 (202)
...+..||++++. -.|+.
T Consensus 139 ---dg~v~a~d~~tG~-~~W~~ 156 (369)
T 2hz6_A 139 ---EYTITMYDTKTRE-LRWNA 156 (369)
T ss_dssp ---EEEEECCCSSSSS-CCCEE
T ss_pred ---CCEEEEEECCCCC-EEEeE
Confidence 1257888887651 14764
No 190
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.62 E-value=2 Score=33.30 Aligned_cols=141 Identities=9% Similarity=0.005 Sum_probs=76.3
Q ss_pred eEEEeCCC--CCeEEcCC-CCCCceeeeeEEE---CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCc---c-c--
Q 028925 33 AEVYDPDT--DKWNLIES-LRRPRWGCFACSF---DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNG---C-V-- 100 (202)
Q Consensus 33 ~~~yd~~t--~~W~~~~~-~~~~r~~~~~~~~---~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~---~-~-- 100 (202)
+++++... ++|+...+ +.... -+.++.- ++.||+.+.... ....+++.+....+|+.+... + .
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~-v~~i~~dp~~~~~l~~g~~~g~----~g~gl~~s~D~G~tW~~~~~~~~~~~~~~ 107 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHT-IHHIVQDPREPERMLMAARTGH----LGPTVFRSDDGGGNWTEATRPPAFNKAPE 107 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSE-EEEEEECSSSTTCEEEEEEC------CCEEEEEESSTTSCCEECSBCCCCCCCC-
T ss_pred eEEEECCCCCCCceECCccCCCCc-eEEEEECCCCCCeEEEEecCCC----CCccEEEeCCCCCCceECCccccCCCccc
Confidence 66676554 78987642 22222 2222322 567887643210 112577777778899988621 1 0
Q ss_pred --------eeeeeEEE----CCEEEEEeCCCCCeEEEEeCCCCcEEEeccC-CCC--------------CCCCCeeEEEE
Q 028925 101 --------MVTAHAVV----GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVP-LTG--------------SSSIGFRFGIL 153 (202)
Q Consensus 101 --------~~~~~~~~----~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~-~~~--------------~~~~~~~~~~~ 153 (202)
...+..+. .+.||+.+ ....+++.+....+|+.+... ..+ ....-..++..
T Consensus 108 ~~~~~~~~~i~~l~~~~~~~~~~l~~g~--~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d 185 (394)
T 3b7f_A 108 GETGRVVDHVFWLTPGHASEPGTWYAGT--SPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVD 185 (394)
T ss_dssp ---CCCCCEEEEEEECCTTSTTCEEEEE--ETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEEC
T ss_pred ccccccccceeEEEeCCCCCCCEEEEEe--cCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEEC
Confidence 01112222 56788764 356788888888999998521 001 01111233332
Q ss_pred ---CCeEEEEcccCCCCceeEEEeCCCCCCCcceeec
Q 028925 154 ---DGKLLLFSLEEEPSYSTLLYDPNAASGSEWQTSK 187 (202)
Q Consensus 154 ---~~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~~ 187 (202)
.+.||+.... ..+++.+-... +|+.+.
T Consensus 186 ~~~~~~l~vg~~~----ggl~~s~DgG~---tW~~~~ 215 (394)
T 3b7f_A 186 PRDPKHLYIGMSS----GGVFESTDAGT---DWKPLN 215 (394)
T ss_dssp TTCTTCEEEEEET----BEEEEESSTTS---SCEECC
T ss_pred CCCCCEEEEEECC----CCEEEECCCCC---CceECC
Confidence 3578875422 14777776666 899874
No 191
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=93.55 E-value=2 Score=33.27 Aligned_cols=148 Identities=11% Similarity=0.069 Sum_probs=77.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++.+++.|+.+ ..+.+||+.+.+-...-..+..........+ ++++++.|+.+ ..+.+||..+.+
T Consensus 181 ~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~~~ 247 (437)
T 3gre_A 181 EKSLLVALTNL------SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-------GIIDIWDIRFNV 247 (437)
T ss_dssp SCEEEEEEETT------SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-------SCEEEEETTTTE
T ss_pred CCCEEEEEeCC------CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-------CeEEEEEcCCcc
Confidence 46777777653 4688899987664322111101112222223 66777776643 468999998776
Q ss_pred EEec-c-CccceeeeeEE-----ECCEEEEEeCCCCCeEEEEeCCCCcEEEe-ccC--------CCC-------------
Q 028925 92 WCQM-K-NGCVMVTAHAV-----VGKKLFCMEWKNQRKLTIFDPEDNSWKMV-PVP--------LTG------------- 142 (202)
Q Consensus 92 W~~~-~-~~~~~~~~~~~-----~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~-~~~--------~~~------------- 142 (202)
.... . +.......... .++.+++.| ...+.+.+||..+.+-... ... ..+
T Consensus 248 ~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 326 (437)
T 3gre_A 248 LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGG-SSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGI 326 (437)
T ss_dssp EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEE-STTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCC
T ss_pred EEEEEecCCCCceEEEEeccccCCCccEEEEE-cCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceeccc
Confidence 4332 1 11111112211 123444444 4677899999987663322 100 000
Q ss_pred -CCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 143 -SSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 143 -~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
....-.+++..++++++.|+.. ..+.+||..+.
T Consensus 327 ~~~~~v~~l~~~~~~~l~s~~~d---~~i~~wd~~~~ 360 (437)
T 3gre_A 327 RSLNALSTISVSNDKILLTDEAT---SSIVMFSLNEL 360 (437)
T ss_dssp CSGGGGCCEEEETTEEEEEEGGG---TEEEEEETTCG
T ss_pred ccCCceEEEEECCceEEEecCCC---CeEEEEECCCc
Confidence 0011223444577888887653 26888888775
No 192
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.30 E-value=2.3 Score=33.05 Aligned_cols=144 Identities=10% Similarity=0.072 Sum_probs=81.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCC--CCCCceeeeeEE-ECCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIES--LRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
+++||+.--. ...++++++.....+.+.. +..+. ..++- .+++||+.-.. ...++++++...
T Consensus 127 ~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~p~--glavd~~~g~lY~~d~~-------~~~I~~~~~dg~ 191 (386)
T 3v65_B 127 RELVFWSDVT------LDRILRANLNGSNVEEVVSTGLESPG--GLAVDWVHDKLYWTDSG-------TSRIEVANLDGA 191 (386)
T ss_dssp TTEEEEEETT------TTEEEEEETTSCCEEEEECSSCSCCC--CEEEETTTTEEEEEETT-------TTEEEECBTTSC
T ss_pred CCeEEEEeCC------CCcEEEEecCCCCcEEEEeCCCCCcc--EEEEEeCCCeEEEEcCC-------CCeEEEEeCCCC
Confidence 4678776321 2468888888776655422 22221 11222 47889987432 246888887654
Q ss_pred eEEeccCcc-ceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE--ECCeEEEEcccCC
Q 028925 91 TWCQMKNGC-VMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI--LDGKLLLFSLEEE 165 (202)
Q Consensus 91 ~W~~~~~~~-~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~~ 165 (202)
.-..+.... ....+.++. ++.||+........+++++++...-+.+.... .....++++ .+++||+.-.
T Consensus 192 ~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~---~~~PnGlavd~~~~~lY~aD~--- 265 (386)
T 3v65_B 192 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTH---LFWPNGLTIDYAGRRMYWVDA--- 265 (386)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSS---CSCEEEEEEEGGGTEEEEEET---
T ss_pred ceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECC---CCCeeeEEEeCCCCEEEEEEC---
Confidence 323322111 122333343 68999987534578999998766544443111 122234554 4789999863
Q ss_pred CCceeEEEeCCCC
Q 028925 166 PSYSTLLYDPNAA 178 (202)
Q Consensus 166 ~~~~~~~yd~~~~ 178 (202)
....|+++|++..
T Consensus 266 ~~~~I~~~d~dG~ 278 (386)
T 3v65_B 266 KHHVIERANLDGS 278 (386)
T ss_dssp TTTEEEEECTTSC
T ss_pred CCCEEEEEeCCCC
Confidence 2347899988754
No 193
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.29 E-value=2.2 Score=32.85 Aligned_cols=102 Identities=12% Similarity=0.170 Sum_probs=55.8
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-CccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccC
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-NGCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVP 139 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~ 139 (202)
++++++.|+.+ ..+.+||..+.+-...- .......+... .++..++.|+ ....+.+||..+.+....-..
T Consensus 134 dg~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 134 DGKFLATGAED-------RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS-GDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEcCC-------CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec-CCCcEEEEECCCCeeEEEEEc
Confidence 67777776643 46889998877643322 12222222222 2455555554 578899999988765443211
Q ss_pred CCCCCCCCeeEEEE--CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 140 LTGSSSIGFRFGIL--DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 140 ~~~~~~~~~~~~~~--~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
. ..-..++.. ++++++.|+.. ..+.+||..++
T Consensus 206 --~--~~v~~~~~~~~~~~~l~~~s~d---~~v~iwd~~~~ 239 (393)
T 1erj_A 206 --E--DGVTTVAVSPGDGKYIAAGSLD---RAVRVWDSETG 239 (393)
T ss_dssp --S--SCEEEEEECSTTCCEEEEEETT---SCEEEEETTTC
T ss_pred --C--CCcEEEEEECCCCCEEEEEcCC---CcEEEEECCCC
Confidence 1 111222222 56777777542 25777777664
No 194
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=93.22 E-value=2.4 Score=33.19 Aligned_cols=64 Identities=8% Similarity=0.035 Sum_probs=37.1
Q ss_pred CEEEEEcCccCCCCCCcceEEEEeCCCCeEEe--ccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 028925 63 GKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQ--MKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWK 134 (202)
Q Consensus 63 ~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~--~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~ 134 (202)
+++++.|+.+ ..+.+||..+.+... +........++...++.+++.|+ ..+.+.+||..+.+..
T Consensus 210 ~~~l~s~~~d-------~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~-~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDRD-------EHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAG-GDDKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEETT-------SCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEE-SSSEEEEEETTTCCEE
T ss_pred CcEEEEEcCC-------CcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEe-CCCeEEEEECCCCcEe
Confidence 7777776543 468888877664332 21111111222221666666665 5778999999887643
No 195
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=93.16 E-value=2 Score=31.98 Aligned_cols=148 Identities=10% Similarity=0.168 Sum_probs=73.2
Q ss_pred EEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--C---CEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 16 KIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--D---GKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 16 ~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~---~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
++++.|+... .-..+.+||..+++........... ....+.+ + +++++.|+.+ ..+.+||..+.
T Consensus 32 ~l~~~~s~~~---~d~~v~iw~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~ 100 (357)
T 3i2n_A 32 KFVTMGNFAR---GTGVIQLYEIQHGDLKLLREIEKAK-PIKCGTFGATSLQQRYLATGDFG-------GNLHIWNLEAP 100 (357)
T ss_dssp EEEEEEC--C---CCEEEEEEEECSSSEEEEEEEEESS-CEEEEECTTCCTTTCCEEEEETT-------SCEEEECTTSC
T ss_pred eEEEecCccC---CCcEEEEEeCCCCcccceeeecccC-cEEEEEEcCCCCCCceEEEecCC-------CeEEEEeCCCC
Confidence 6666665410 1246888898887765432211111 1112222 2 4666666543 45888888765
Q ss_pred e--EEeccCccceeeeeE-------EECCEEEEEeCCCCCeEEEEeCCCCc--EEEeccCCCCCCCCCeeEE-----EEC
Q 028925 91 T--WCQMKNGCVMVTAHA-------VVGKKLFCMEWKNQRKLTIFDPEDNS--WKMVPVPLTGSSSIGFRFG-----ILD 154 (202)
Q Consensus 91 ~--W~~~~~~~~~~~~~~-------~~~~~iyv~Gg~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~-----~~~ 154 (202)
+ -..+........... ..++..++.|+ ..+.+.+||..+.. ...+..........-..++ ..+
T Consensus 101 ~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 101 EMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS-RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE 179 (357)
T ss_dssp SSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE-TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C
T ss_pred CccEEEEEecccceEEEeeccccccCCCccEEEEEe-CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC
Confidence 4 222221111111111 23455555654 57789999988765 3444311111111222222 146
Q ss_pred CeEEEEcccCCCCceeEEEeCCCC
Q 028925 155 GKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 155 ~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+++++.|+.. ..+.+||..+.
T Consensus 180 ~~~l~~~~~d---~~i~i~d~~~~ 200 (357)
T 3i2n_A 180 ERVVCAGYDN---GDIKLFDLRNM 200 (357)
T ss_dssp CCEEEEEETT---SEEEEEETTTT
T ss_pred CCEEEEEccC---CeEEEEECccC
Confidence 7777777542 36888888775
No 196
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=93.15 E-value=1.9 Score=31.87 Aligned_cols=138 Identities=14% Similarity=0.097 Sum_probs=70.4
Q ss_pred eeEEEeCCCCCeEEcCCCCCC----ceeeeeEEECCEEEEE----cCccC------CCCCCcceEEEEeCCCCeEEeccC
Q 028925 32 SAEVYDPDTDKWNLIESLRRP----RWGCFACSFDGKLYVM----GGRSS------FTIGNSKFVDVYNPERHTWCQMKN 97 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~----r~~~~~~~~~~~iy~~----gG~~~------~~~~~~~~~~~yd~~~~~W~~~~~ 97 (202)
.+.+||+. .+.+.+...... +-...+..-+|+||+. |-... ........+++||+.+.+.+.+.
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~- 185 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA- 185 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-
Confidence 57788875 566554321111 1112222347889985 32110 00112357999999888777654
Q ss_pred ccceeeeeEE-ECC-EEEEEeCCC----CCeEEEEeCCCCcEEEecc--CCCCCCCCCeeEEE-ECCeEEEEcccCCCCc
Q 028925 98 GCVMVTAHAV-VGK-KLFCMEWKN----QRKLTIFDPEDNSWKMVPV--PLTGSSSIGFRFGI-LDGKLLLFSLEEEPSY 168 (202)
Q Consensus 98 ~~~~~~~~~~-~~~-~iyv~Gg~~----~~~~~~yd~~~~~W~~~~~--~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~ 168 (202)
......+.+. .++ .||+..... ...+++||...+....... .... ....+++. .+|+||+.. ..
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~--~~pdgi~~d~~G~lwv~~-----~~ 258 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD--GLPDGFCVDRGGWLWSSS-----GT 258 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS--SCCCSEEECTTSCEEECC-----SS
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC--CCCCeEEECCCCCEEEec-----CC
Confidence 1111222222 244 588875321 2689999987665322110 1111 11122333 367788754 22
Q ss_pred eeEEEeCCCC
Q 028925 169 STLLYDPNAA 178 (202)
Q Consensus 169 ~~~~yd~~~~ 178 (202)
.+.+|+++..
T Consensus 259 gv~~~~~~g~ 268 (305)
T 3dr2_A 259 GVCVFDSDGQ 268 (305)
T ss_dssp EEEEECTTSC
T ss_pred cEEEECCCCC
Confidence 5899999765
No 197
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.09 E-value=3.4 Score=34.57 Aligned_cols=114 Identities=11% Similarity=0.017 Sum_probs=62.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCc------------------------eeeeeEEECCEEEEEc
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPR------------------------WGCFACSFDGKLYVMG 69 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r------------------------~~~~~~~~~~~iy~~g 69 (202)
+++.+++++.........+++++|+.+.+...+....... ....+..-+|+.++++
T Consensus 47 dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~ 126 (741)
T 2ecf_A 47 DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFP 126 (741)
T ss_dssp TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEE
T ss_pred CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEE
Confidence 5655555443112223457999999998876553321100 0111122367665555
Q ss_pred CccCCCCCCcceEEEEeCCCC---eEEeccCcccee-eeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEec
Q 028925 70 GRSSFTIGNSKFVDVYNPERH---TWCQMKNGCVMV-TAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 70 G~~~~~~~~~~~~~~yd~~~~---~W~~~~~~~~~~-~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~ 137 (202)
.. ..++++|..+. +-..+....... ......+++.++++. ...++++|..+.+...+.
T Consensus 127 ~~--------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 127 LG--------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp ET--------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEEEECC
T ss_pred eC--------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCEEEec
Confidence 32 46899998877 544444322211 222334666555542 358999999988777664
No 198
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=92.98 E-value=2.1 Score=31.85 Aligned_cols=104 Identities=11% Similarity=0.073 Sum_probs=53.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeE-EECCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFAC-SFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~-~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++.++.|+.+ ..+.+||..+.+.........+....... .-++++++.|+.+ ..+.+||..+.+-
T Consensus 97 ~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-------g~i~vwd~~~~~~ 163 (368)
T 3mmy_A 97 DGSKVFTASCD------KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWD-------KTLKFWDTRSSNP 163 (368)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETT-------SEEEEECSSCSSC
T ss_pred CCCEEEEEcCC------CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCC-------CcEEEEECCCCcE
Confidence 44455555432 35788898887765543322222221111 2356666666543 4688898876542
Q ss_pred EeccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc
Q 028925 93 CQMKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
...-...............+++.. ....+.+||.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 164 MMVLQLPERCYCADVIYPMAVVAT--AERGLIVYQLENQP 201 (368)
T ss_dssp SEEEECSSCEEEEEEETTEEEEEE--GGGCEEEEECSSSC
T ss_pred EEEEecCCCceEEEecCCeeEEEe--CCCcEEEEEecccc
Confidence 211111122223334455555544 45677888876654
No 199
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=92.95 E-value=1.7 Score=30.55 Aligned_cols=142 Identities=13% Similarity=0.016 Sum_probs=72.9
Q ss_pred EEEECCEEEEEcCcCCCCCceeeeEEEeCCCCC--e-EEc----CCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceE
Q 028925 10 CAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK--W-NLI----ESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFV 82 (202)
Q Consensus 10 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W-~~~----~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~ 82 (202)
++.+++++|++-|. .+|+++..... . ..+ +.||. ...++....++++|++-|. ..
T Consensus 11 ~~~~~g~~~fFkg~--------~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg~---------~y 72 (196)
T 3c7x_A 11 VAMLRGEMFVFKER--------WFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKGD---------KH 72 (196)
T ss_dssp EEEETTEEEEEETT--------EEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEETT---------EE
T ss_pred EEEcCCEEEEEECC--------EEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecCC---------EE
Confidence 34679999999763 47777543100 0 111 12343 2222222357899999652 47
Q ss_pred EEEeCCCCeE---EeccC----cc-ceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEE-----ecc-CCCCCCCC
Q 028925 83 DVYNPERHTW---CQMKN----GC-VMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKM-----VPV-PLTGSSSI 146 (202)
Q Consensus 83 ~~yd~~~~~W---~~~~~----~~-~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~-----~~~-~~~~~~~~ 146 (202)
++|+..+... ..+.. .+ ....++... ++++|++- .+..+.||..+++-.. +.. +..+ ...
T Consensus 73 w~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFk---G~~yw~yd~~~~~v~~gyPk~i~~~~gip-~~i 148 (196)
T 3c7x_A 73 WVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFR---GNKYYRFNEELRAVDSEYPKNIKVWEGIP-ESP 148 (196)
T ss_dssp EEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEE---TTEEEEEETTTTEECTTCSEEGGGSBTCC-SSC
T ss_pred EEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEE---CCEEEEEeCCcccccCCCCccHHHCCCcC-CCc
Confidence 7887532110 00110 11 112333333 68999994 4567899987654221 110 1111 111
Q ss_pred CeeEEEECC-eEEEEcccCCCCceeEEEeCCCC
Q 028925 147 GFRFGILDG-KLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 147 ~~~~~~~~~-~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
-+++...++ ++|++-|. ..++||..+.
T Consensus 149 daAf~~~~~~~~YfFkg~-----~y~r~d~~~~ 176 (196)
T 3c7x_A 149 RGSFMGSDEVFTYFYKGN-----KYWKFNNQKL 176 (196)
T ss_dssp SEEEECTTSSEEEEEETT-----EEEEEETTTT
T ss_pred ceeEEecCCCEEEEEECC-----EEEEEECCcc
Confidence 222222244 89998754 5789998775
No 200
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.88 E-value=2.1 Score=36.27 Aligned_cols=105 Identities=13% Similarity=0.051 Sum_probs=58.3
Q ss_pred ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCcc-ceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEEEec
Q 028925 61 FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGC-VMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 61 ~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~ 137 (202)
.+++||+.-. ....+.++++....-..+.... ....+.++ .++.||+........|++++++...-+.+.
T Consensus 463 ~~g~LY~tD~-------~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~ 535 (699)
T 1n7d_A 463 IHSNIYWTDS-------VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 535 (699)
T ss_dssp SSSBCEECCT-------TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES
T ss_pred eCCcEEEEec-------cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE
Confidence 4678998632 1346888988766544433211 11122233 267888875323468888887655443332
Q ss_pred cCCCCCCCCCeeEEE--ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 138 VPLTGSSSIGFRFGI--LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 138 ~~~~~~~~~~~~~~~--~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
... .....++++ .+++||+.-. ....|+++|+...
T Consensus 536 ~~~---l~~PnGlavd~~~~~LY~aD~---~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 536 TEN---IQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGG 572 (699)
T ss_dssp CSS---CSSCCCEEECTTTCCEEEEET---TTTEEEEECSSSS
T ss_pred eCC---CCCccEEEEeccCCEEEEEec---CCCeEEEEccCCC
Confidence 111 112223444 3689999763 2347888888654
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.88 E-value=2 Score=31.44 Aligned_cols=151 Identities=15% Similarity=0.199 Sum_probs=76.8
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEc-CCCCCC--ceeeeeEE--ECCEEEEEcCccC--------CCCCCcce
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLI-ESLRRP--RWGCFACS--FDGKLYVMGGRSS--------FTIGNSKF 81 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~--r~~~~~~~--~~~~iy~~gG~~~--------~~~~~~~~ 81 (202)
++||+.... ..+++||+. ++.... ...... ........ -+|+||+...... ........
T Consensus 83 g~l~v~~~~-------~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~ 154 (314)
T 1pjx_A 83 NQLFVADMR-------LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGS 154 (314)
T ss_dssp SEEEEEETT-------TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEE
T ss_pred CcEEEEECC-------CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCe
Confidence 788887532 258899998 777665 332111 11122222 3788998754221 00111257
Q ss_pred EEEEeCCCCeEEeccCccceeeeeEE-----ECC-EEEEEeCCCCCeEEEEeCC-CCcEEEec--cCCCCCC-CCCeeEE
Q 028925 82 VDVYNPERHTWCQMKNGCVMVTAHAV-----VGK-KLFCMEWKNQRKLTIFDPE-DNSWKMVP--VPLTGSS-SIGFRFG 151 (202)
Q Consensus 82 ~~~yd~~~~~W~~~~~~~~~~~~~~~-----~~~-~iyv~Gg~~~~~~~~yd~~-~~~W~~~~--~~~~~~~-~~~~~~~ 151 (202)
+++||+. .+...+............ .++ .||+... ....+++||++ +.+..... ...+... .....++
T Consensus 155 l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~ 232 (314)
T 1pjx_A 155 IYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAET-PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp EEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEET-TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred EEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEEC-CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceE
Confidence 8999986 555544311111122222 234 5777753 45789999876 44443221 0111100 1112333
Q ss_pred E-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 152 I-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 152 ~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
. .+++||+.... ...+.+||++++
T Consensus 233 ~d~~G~l~v~~~~---~~~i~~~d~~~g 257 (314)
T 1pjx_A 233 FDEDNNLLVANWG---SSHIEVFGPDGG 257 (314)
T ss_dssp EBTTCCEEEEEET---TTEEEEECTTCB
T ss_pred ECCCCCEEEEEcC---CCEEEEEcCCCC
Confidence 3 26788886422 236899999854
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=92.81 E-value=3.8 Score=34.33 Aligned_cols=141 Identities=13% Similarity=0.120 Sum_probs=74.7
Q ss_pred eeeEEEeCCCCCe--EEcCCCCC-Cceeeee-EEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeE
Q 028925 31 SSAEVYDPDTDKW--NLIESLRR-PRWGCFA-CSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHA 106 (202)
Q Consensus 31 ~~~~~yd~~t~~W--~~~~~~~~-~r~~~~~-~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~ 106 (202)
.+++++++.+..- ..+...+. +...... ..-+|+..++...... ....++++|..+.++..+.+.........
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~---~~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 278 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW---SENDVYWKRPGEKDFRLLVKGVGAKYEVH 278 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT---TEEEEEEECTTCSSCEEEEECSSCCEEEE
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC---CceEEEEEcCCCCceEEeecCCCceEEEE
Confidence 4689999887653 22222211 1222222 2336665555433221 23568888877777887763322222223
Q ss_pred EECCEEEEEeCC--CCCeEEEEeCCCCc---EEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCC
Q 028925 107 VVGKKLFCMEWK--NQRKLTIFDPEDNS---WKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 107 ~~~~~iyv~Gg~--~~~~~~~yd~~~~~---W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
..++.+|+.... ....++.+|.++.. |+.+-...+. ..-..+...++++++...... ...++.+++..
T Consensus 279 ~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--~~l~~~~~~~~~lv~~~~~dg-~~~l~~~~~~g 351 (695)
T 2bkl_A 279 AWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS--ASLLSVSIVGGHLSLEYLKDA-TSEVRVATLKG 351 (695)
T ss_dssp EETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS--CEEEEEEEETTEEEEEEEETT-EEEEEEEETTC
T ss_pred ecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC--CeEEEEEEECCEEEEEEEECC-EEEEEEEeCCC
Confidence 346666665421 24689999987654 8887522211 111223345888877654322 23677777654
No 203
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.78 E-value=2.1 Score=31.40 Aligned_cols=63 Identities=14% Similarity=0.293 Sum_probs=32.8
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--C--CEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--D--GKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~--~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
+++++.|+.+ ..+.+||+.+.+|..+..+.........+.+ + +.+++.|+.+ ..+.+||..+.
T Consensus 67 g~~l~s~s~D------~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-------~~v~~wd~~~~ 133 (297)
T 2pm7_B 67 GTILASCSYD------GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-------GKVSVVEFKEN 133 (297)
T ss_dssp CSEEEEEETT------TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-------SEEEEEEBCSS
T ss_pred CCEEEEEcCC------CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-------CcEEEEEecCC
Confidence 4555665543 3577788887776544322211111222222 2 5566665533 45777877654
No 204
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.73 E-value=4 Score=34.43 Aligned_cols=146 Identities=11% Similarity=0.033 Sum_probs=70.4
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCC-eE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH-TW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~-~W 92 (202)
+++.+++|+.+ ..+.+||..+++....-..........+..-+++.++.|+. ...+.+||..++ ..
T Consensus 66 ~~~~l~~~~~d------g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------dg~i~vw~~~~~~~~ 132 (814)
T 3mkq_A 66 RKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSD-------DLTVKLWNWENNWAL 132 (814)
T ss_dssp GGTEEEEEETT------SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEET-------TSEEEEEEGGGTSEE
T ss_pred CCCEEEEEeCC------CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcC-------CCEEEEEECCCCceE
Confidence 44555555432 35788898877654321111111111112235655555543 246888888765 32
Q ss_pred Eecc-CccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE---CCeEEEEcccCCC
Q 028925 93 CQMK-NGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL---DGKLLLFSLEEEP 166 (202)
Q Consensus 93 ~~~~-~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~---~~~i~v~gG~~~~ 166 (202)
...- ............ ++.+++.++ ..+.+.+||..+.+-...-..... ..-..++.. ++..++.|+..
T Consensus 133 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~~~~~d-- 207 (814)
T 3mkq_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGC-LDRTVKVWSLGQSTPNFTLTTGQE--RGVNYVDYYPLPDKPYMITASDD-- 207 (814)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEEEEE-TTSEEEEEETTCSSCSEEEECCCT--TCCCEEEECCSTTCCEEEEECTT--
T ss_pred EEEEcCCCCcEEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCcceeEEecCCC--CCEEEEEEEECCCCCEEEEEeCC--
Confidence 2221 222222223332 455666654 568899999865542222101111 111122222 66667766432
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
..+.+||..++
T Consensus 208 -g~i~~~d~~~~ 218 (814)
T 3mkq_A 208 -LTIKIWDYQTK 218 (814)
T ss_dssp -SEEEEEETTTT
T ss_pred -CEEEEEECCCC
Confidence 26777777654
No 205
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.71 E-value=2.1 Score=31.21 Aligned_cols=92 Identities=12% Similarity=0.004 Sum_probs=48.6
Q ss_pred ceEEEEeCCCCeEEeccCccceeeee-EE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCe
Q 028925 80 KFVDVYNPERHTWCQMKNGCVMVTAH-AV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGK 156 (202)
Q Consensus 80 ~~~~~yd~~~~~W~~~~~~~~~~~~~-~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~ 156 (202)
..+.++|..+..-............. .. .++.+++..|...+.+.+||..+.+-... .... ...-.+++. .+++
T Consensus 221 ~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~--l~gH-~~~V~~l~~spdg~ 297 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAE--LKGH-TSRVLSLTMSPDGA 297 (318)
T ss_dssp CEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEE--ECCC-SSCEEEEEECTTSS
T ss_pred CEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEE--EcCC-CCCEEEEEEcCCCC
Confidence 46788888776544433211111112 22 24556666666678899999877653222 1111 111122222 2677
Q ss_pred EEEEcccCCCCceeEEEeCCC
Q 028925 157 LLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 157 i~v~gG~~~~~~~~~~yd~~~ 177 (202)
+++.|+.. ..+.+||..+
T Consensus 298 ~l~S~s~D---~~v~iWd~~~ 315 (318)
T 4ggc_A 298 TVASAAAD---ETLRLWRCFE 315 (318)
T ss_dssp CEEEEETT---TEEEEECCSC
T ss_pred EEEEEecC---CeEEEEECCC
Confidence 77777643 2677887754
No 206
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=92.66 E-value=2.8 Score=32.48 Aligned_cols=143 Identities=10% Similarity=-0.002 Sum_probs=75.2
Q ss_pred EEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCe--EEc----CCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcceE
Q 028925 10 CAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKW--NLI----ESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKFV 82 (202)
Q Consensus 10 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W--~~~----~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~ 82 (202)
+..+++++|+|=|. .+|+++.....- ..+ +.||.. ..++... .++++|++-|. ..
T Consensus 186 v~~~~g~~~fFkg~--------~~Wr~~~~~~~~~p~~I~~~wpgLP~~-iDAa~~~~~~g~~~fFkg~---------~y 247 (365)
T 3ba0_A 186 VTTVGNKIFFFKDR--------FFWLKVSERPKTSVNLISSLWPTLPSG-IEAAYEIEARNQVFLFKDD---------KY 247 (365)
T ss_dssp EEEETTEEEEEETT--------EEEECCSSCCCCCEEEHHHHCSSCCSS-CCEEEEEGGGTEEEEEETT---------EE
T ss_pred EEEcCCeEEEEeCC--------EEEEEcCCCccCCccchhhhccCCCCC-ccEEEEecCCCEEEEEeCC---------EE
Confidence 34569999999663 477776554321 111 233422 2222222 37999999653 46
Q ss_pred EEEeCCCCe--EE-eccC--ccc---eeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEE-----eccCCCCCCCCC
Q 028925 83 DVYNPERHT--WC-QMKN--GCV---MVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKM-----VPVPLTGSSSIG 147 (202)
Q Consensus 83 ~~yd~~~~~--W~-~~~~--~~~---~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~-----~~~~~~~~~~~~ 147 (202)
++|+..... +. .+.. .|. ...++... ++++|++- .+..++||..+++-.. +....+.....-
T Consensus 248 Wr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFk---G~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~i 324 (365)
T 3ba0_A 248 WLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFV---DNQYWRYDERRQMMDPGYPKLITKNFQGIGPKI 324 (365)
T ss_dssp EECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEE---TTEEEEEETTTTEECSSCCCCHHHHSTTCCSSC
T ss_pred EEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEE---CCEEEEEeCCcceecCCCCcchhhcCCCCCCcc
Confidence 666543211 10 1110 111 22333333 57999994 4578999987654222 110011111212
Q ss_pred eeEEEE-CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 148 FRFGIL-DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 148 ~~~~~~-~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
-++... ++++|.+-|. ..|+||..+.
T Consensus 325 DaA~~~~~g~~YfFkg~-----~ywr~d~~~~ 351 (365)
T 3ba0_A 325 DAVFYSKNKYYYFFQGS-----NQFEYDFLLQ 351 (365)
T ss_dssp SEEEEETTTEEEEEETT-----EEEEEETTTT
T ss_pred ceeeEecCCcEEEEeCC-----EEEEEECCcc
Confidence 233334 8999998753 5899998876
No 207
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.65 E-value=2.6 Score=31.98 Aligned_cols=151 Identities=10% Similarity=-0.068 Sum_probs=73.6
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeE--EECCEEEEEcCccCC---------------CCCCcceEEEEeCCCCeEEe
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFAC--SFDGKLYVMGGRSSF---------------TIGNSKFVDVYNPERHTWCQ 94 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~--~~~~~iy~~gG~~~~---------------~~~~~~~~~~yd~~~~~W~~ 94 (202)
.++++|+.+.+-+.+...+......... .-++++++.--.... .......++++|..+.+-..
T Consensus 103 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (388)
T 3pe7_A 103 NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV 182 (388)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE
T ss_pred eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE
Confidence 5788888888766554444332221111 234554432100000 01123578999998887666
Q ss_pred ccCccce-eeeeEEE-CCEEEEEeCC-----CCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE-EECCe-EEEEcccCC
Q 028925 95 MKNGCVM-VTAHAVV-GKKLFCMEWK-----NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG-ILDGK-LLLFSLEEE 165 (202)
Q Consensus 95 ~~~~~~~-~~~~~~~-~~~iyv~Gg~-----~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~-i~v~gG~~~ 165 (202)
+...... ....... +++.+++... ....++.+|.++...+.+...... ......+ .-+++ |+.......
T Consensus 183 l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~--~~~~~~~~spdg~~l~~~~~~~~ 260 (388)
T 3pe7_A 183 ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEG--ESCTHEFWVPDGSALVYVSYLKG 260 (388)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTT--EEEEEEEECTTSSCEEEEEEETT
T ss_pred eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCC--cccccceECCCCCEEEEEecCCC
Confidence 6522221 2222333 4443333211 145899999887776666421100 0111111 22555 544432222
Q ss_pred CC-ceeEEEeCCCCCCCcceeec
Q 028925 166 PS-YSTLLYDPNAASGSEWQTSK 187 (202)
Q Consensus 166 ~~-~~~~~yd~~~~~~~~W~~~~ 187 (202)
.. ..+++||++++ +-+.+.
T Consensus 261 ~~~~~l~~~d~~~g---~~~~l~ 280 (388)
T 3pe7_A 261 SPDRFIYSADPETL---ENRQLT 280 (388)
T ss_dssp CCCEEEEEECTTTC---CEEEEE
T ss_pred CCcceEEEEecCCC---ceEEEE
Confidence 21 25999999987 655553
No 208
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.62 E-value=2.6 Score=31.94 Aligned_cols=145 Identities=12% Similarity=-0.030 Sum_probs=76.4
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEEE-CCE-EEEEcCccCCCCCCcceEEEEeCCCCeEEeccCcc-cee-eee-
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACSF-DGK-LYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGC-VMV-TAH- 105 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-~~~-~~~- 105 (202)
..++++|+.+++.+.+...... ..+....- +++ |++... .. .......++++|..+.++..+.... ... ...
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~~-~~~~~~sp~dg~~l~~~~~-~~-~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTAW-LGHPIYRPFDDSTVGFCHE-GP-HDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF 244 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESSC-EEEEEEETTEEEEEEEEEC-SC-SSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE
T ss_pred ceEEEEECCCCcEEeeccCCcc-cccceECCCCCCEEEEEec-CC-CCCCCceEEEEECCCCceeEeeccCCCccccceE
Confidence 4789999998887666432111 11111222 354 444432 11 1111257899999888777765421 111 111
Q ss_pred EEECCE-EEEEe---CCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCC-------------CC
Q 028925 106 AVVGKK-LFCME---WKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEE-------------PS 167 (202)
Q Consensus 106 ~~~~~~-iyv~G---g~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~-------------~~ 167 (202)
...+++ |+... +.....++++|..+.+.+.+... +. .. ..... +++++++.+... ..
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~---~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~ 319 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVM-PP---CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEND 319 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEEC-CS---EE-EEEECSSSSEEEEEECCC----------CCCCC
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeC-CC---CC-CCccCCCCceEEEecCCcceeeccccccccCCC
Confidence 222454 44442 11123499999998887776421 11 11 22233 777776644211 12
Q ss_pred ceeEEEeCCCCCCCcceee
Q 028925 168 YSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 168 ~~~~~yd~~~~~~~~W~~~ 186 (202)
..++.+|++++ +.+.+
T Consensus 320 ~~i~~~d~~~~---~~~~l 335 (396)
T 3c5m_A 320 PFLYVLNTKAK---SAQKL 335 (396)
T ss_dssp CEEEEEETTTT---BCCEE
T ss_pred CcEEEEecccC---ceEEc
Confidence 47999999887 65555
No 209
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.56 E-value=2.5 Score=31.62 Aligned_cols=148 Identities=14% Similarity=0.186 Sum_probs=70.1
Q ss_pred EEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCC-c-eeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCC--
Q 028925 17 IYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRP-R-WGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERH-- 90 (202)
Q Consensus 17 iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-r-~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~-- 90 (202)
+++.|+.+ ..+.+||+.++..+....+... . .....+.+ ++++++.|+.+ ..+.+||....
T Consensus 26 ~las~~~D------~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D-------~~v~iw~~~~~~~ 92 (330)
T 2hes_X 26 ILATGSTD------RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD-------STVSIWAKEESAD 92 (330)
T ss_dssp EEEEEESS------SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT-------SCEEEEEC-----
T ss_pred EEEEEcCC------CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC-------CcEEEEEcccCcC
Confidence 55666543 3578888887655443322111 1 11222222 66777666643 35778876432
Q ss_pred ---eEEecc---CccceeeeeE-EECCEEEEEeCCCCCeEEEEeCCC--CcEEEeccCCCCCCCCCeeEEE--ECCeEEE
Q 028925 91 ---TWCQMK---NGCVMVTAHA-VVGKKLFCMEWKNQRKLTIFDPED--NSWKMVPVPLTGSSSIGFRFGI--LDGKLLL 159 (202)
Q Consensus 91 ---~W~~~~---~~~~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v 159 (202)
.+..+. .......+.. ..+++.++.|+ ..+.+.+||... ..++.+...... ......+. .++.+++
T Consensus 93 ~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s-~D~~v~iwd~~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 93 RTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS-RDKSVWIWETDESGEEYECISVLQEH--SQDVKHVIWHPSEALLA 169 (330)
T ss_dssp --CCCEEEEEEC----CEEEEEECTTSCEEEEEE-TTSCEEEEECCTTCCCCEEEEEECCC--SSCEEEEEECSSSSEEE
T ss_pred ccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe-CCCEEEEEeccCCCCCeEEEEEeccC--CCceEEEEECCCCCEEE
Confidence 122211 1111111222 22566655554 577889999843 344443311111 11222222 2567777
Q ss_pred EcccCCCCceeEEEeCCCCCCCcceee
Q 028925 160 FSLEEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 160 ~gG~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
.|+.. ..+.+||..++ .|+.+
T Consensus 170 s~s~D---~~i~iW~~~~~---~~~~~ 190 (330)
T 2hes_X 170 SSSYD---DTVRIWKDYDD---DWECV 190 (330)
T ss_dssp EEETT---SCEEEEEEETT---EEEEE
T ss_pred EEcCC---CeEEEEECCCC---CeeEE
Confidence 76543 25777777665 55544
No 210
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.55 E-value=2.4 Score=31.32 Aligned_cols=61 Identities=11% Similarity=0.100 Sum_probs=33.9
Q ss_pred EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 111 KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 111 ~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.+++.++ ....+.+||..+.+-...-.. . ...-.+++. .++++++.|+.. ..+.+||..+.
T Consensus 186 ~~~~s~~-~d~~i~i~d~~~~~~~~~~~~--h-~~~v~~~~~s~~~~~l~s~s~D---g~i~iwd~~~~ 247 (340)
T 4aow_A 186 PIIVSCG-WDKLVKVWNLANCKLKTNHIG--H-TGYLNTVTVSPDGSLCASGGKD---GQAMLWDLNEG 247 (340)
T ss_dssp CEEEEEE-TTSCEEEEETTTTEEEEEECC--C-SSCEEEEEECTTSSEEEEEETT---CEEEEEETTTT
T ss_pred cEEEEEc-CCCEEEEEECCCCceeeEecC--C-CCcEEEEEECCCCCEEEEEeCC---CeEEEEEeccC
Confidence 3444444 567889999987765443211 1 111122222 267777777543 26778887664
No 211
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=92.47 E-value=4 Score=33.71 Aligned_cols=118 Identities=16% Similarity=0.149 Sum_probs=67.3
Q ss_pred eeEEECCEEEEEcCccCCCCCCcceEEEEeCCCC--eEEeccCccc--------eeeeeEEECCEEEEEeCCCCCeEEEE
Q 028925 57 FACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH--TWCQMKNGCV--------MVTAHAVVGKKLFCMEWKNQRKLTIF 126 (202)
Q Consensus 57 ~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~--------~~~~~~~~~~~iyv~Gg~~~~~~~~y 126 (202)
+.++.++.+|+.+.. ..++.+|..+. .|+.-...+. ...+..+.+++||+.. ....+..+
T Consensus 63 ~P~v~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t--~dg~l~Al 132 (582)
T 1flg_A 63 QAIVSDGVIYVTASY--------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT--LDASVVAL 132 (582)
T ss_dssp CCEEETTEEEEEETT--------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE--TTTEEEEE
T ss_pred ccEEECCEEEEEcCC--------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe--CCCEEEEE
Confidence 445679999997642 23888888765 4877542211 0123456789998864 46789999
Q ss_pred eCCCCc--EEEeccCCCCCCCCCeeEEEECC------eEEEEcc--cCCCCceeEEEeCCCCCCCccee
Q 028925 127 DPEDNS--WKMVPVPLTGSSSIGFRFGILDG------KLLLFSL--EEEPSYSTLLYDPNAASGSEWQT 185 (202)
Q Consensus 127 d~~~~~--W~~~~~~~~~~~~~~~~~~~~~~------~i~v~gG--~~~~~~~~~~yd~~~~~~~~W~~ 185 (202)
|.++.+ |+.-............+-++.++ .||+-.. +......++.||++++. -.|+.
T Consensus 133 D~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~-~~W~~ 200 (582)
T 1flg_A 133 NKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE-EIWMR 200 (582)
T ss_dssp ESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC-EEEEE
T ss_pred ECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC-EEeec
Confidence 998776 88753111110011112234455 5655221 11223478999998752 25864
No 212
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.44 E-value=4.5 Score=34.27 Aligned_cols=146 Identities=12% Similarity=0.091 Sum_probs=81.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
++.|||... .-+.+||+.+++............ ......+|.||+... ..+.+||+.+++.+
T Consensus 73 ~g~lWigT~--------~Gl~~yd~~~~~f~~~~~~~~~~i-~~i~~~~g~lWigt~---------~Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 73 NTYLYMGTD--------NGILVYNYRADRYEQPETDFPTDV-RTMALQGDTLWLGAL---------NGLYTYQLQSRKLT 134 (758)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEECCCSCCCCSCE-EEEEEETTEEEEEET---------TEEEEEETTTCCEE
T ss_pred CCcEEEEeC--------CCeEEEeCCCCEEECcccCCCceE-EEEEecCCcEEEEcC---------CcceeEeCCCCeEE
Confidence 567887542 237899999887764211111111 122335888888531 25889999988887
Q ss_pred eccC----ccce-eeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCC--CeeEEEE-CC-eEEEEccc
Q 028925 94 QMKN----GCVM-VTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSI--GFRFGIL-DG-KLLLFSLE 163 (202)
Q Consensus 94 ~~~~----~~~~-~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~--~~~~~~~-~~-~i~v~gG~ 163 (202)
.... .+.. ..+.... ++.|++.. ...+.+||+.+++++....+....... -.++... ++ .|+| |-.
T Consensus 135 ~~~~~~~~l~~~~i~~i~~d~~g~lWigt---~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWi-gt~ 210 (758)
T 3ott_A 135 SFDTRRNGLPNNTIYSIIRTKDNQIYVGT---YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWI-GTE 210 (758)
T ss_dssp EECHHHHCCSCSCEEEEEECTTCCEEEEE---TTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEE-EEE
T ss_pred EeccCCCCcCCCeEEEEEEcCCCCEEEEe---CCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEE-EEC
Confidence 6631 1111 1122222 67888752 357899999999887764222111111 1123233 23 4666 321
Q ss_pred CCCCceeEEEeCCCCCCCcceeecc
Q 028925 164 EEPSYSTLLYDPNAASGSEWQTSKI 188 (202)
Q Consensus 164 ~~~~~~~~~yd~~~~~~~~W~~~~~ 188 (202)
..+..||+.++ +++....
T Consensus 211 ----~Gl~~~~~~~~---~~~~~~~ 228 (758)
T 3ott_A 211 ----GYLFQYFPSTG---QIKQTEA 228 (758)
T ss_dssp ----EEEEEEETTTT---EEEEEEE
T ss_pred ----CCCeEEcCCCC---eEEeccC
Confidence 24888999887 7776543
No 213
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=92.43 E-value=2.6 Score=31.58 Aligned_cols=145 Identities=10% Similarity=0.109 Sum_probs=82.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcC--CCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIE--SLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++||+.-.. ...+.++|+....-+.+. .+..|+ .+++ .++.||+..-. ....++++++..
T Consensus 88 ~~~ly~~d~~------~~~I~~~~~~g~~~~~~~~~~~~~P~---~iavdp~~g~ly~~d~~------~~~~I~~~~~dG 152 (316)
T 1ijq_A 88 HSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG------TPAKIKKGGLNG 152 (316)
T ss_dssp TTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS------SSCEEEEEETTS
T ss_pred CCeEEEEECC------CCEEEEEeCCCCceEEEEECCCCCcc---eEEeCCCCCEEEEEccC------CCCeEEEEcCCC
Confidence 6788887322 146788888765433332 222222 2223 37889987421 124688988765
Q ss_pred CeEEeccC-ccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCC
Q 028925 90 HTWCQMKN-GCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEP 166 (202)
Q Consensus 90 ~~W~~~~~-~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~ 166 (202)
..-+.+.. ......+.++. +++||+... ..+.++.+|.+...-+.+... ........++++.++.||+... .
T Consensus 153 ~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~-~~~~I~~~d~dg~~~~~~~~~-~~~~~~P~giav~~~~ly~~d~---~ 227 (316)
T 1ijq_A 153 VDIYSLVTENIQWPNGITLDLLSGRLYWVDS-KLHSISSIDVNGGNRKTILED-EKRLAHPFSLAVFEDKVFWTDI---I 227 (316)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEEC-TTTTSSEEEEEEETTEEEEEET---T
T ss_pred CCeEEEEECCCCCceEEEEeccCCEEEEEEC-CCCeEEEEecCCCceEEEeec-CCccCCcEEEEEECCEEEEEEC---C
Confidence 43333321 11222333443 689999974 467899999876544444211 1112334567778899999762 2
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
...+.++|+.++
T Consensus 228 ~~~V~~~~~~~g 239 (316)
T 1ijq_A 228 NEAIFSANRLTG 239 (316)
T ss_dssp TTEEEEEETTTC
T ss_pred CCeEEEEeCCCC
Confidence 347888888654
No 214
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=92.38 E-value=3.2 Score=32.41 Aligned_cols=145 Identities=10% Similarity=0.110 Sum_probs=83.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcC--CCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIE--SLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++||+.-.. ...++++|+....-+.+. .+..|+ .+++ .++.||+.--. ....++++++..
T Consensus 170 ~~~lY~~d~~------~~~I~~~~~~g~~~~~l~~~~~~~P~---~iavdp~~g~ly~td~~------~~~~I~~~~~dG 234 (400)
T 3p5b_L 170 HSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG------TPAKIKKGGLNG 234 (400)
T ss_dssp TTEEEEEETT------TTEEEEECTTTCSEEEEEECSSCCEE---EEEEETTTTEEEEEECS------SSCCEEEEETTS
T ss_pred CCceEEEECC------CCeEEEEeCCCCceEEEEeCCCCCcc---eEEEecccCeEEEEeCC------CCCEEEEEeCCC
Confidence 6788887432 136788888766544432 222232 2233 36889986411 123688888765
Q ss_pred CeEEecc-CccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCC
Q 028925 90 HTWCQMK-NGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEP 166 (202)
Q Consensus 90 ~~W~~~~-~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~ 166 (202)
..=..+. .......+.++. +++||+... ....|+.+|.+...-+.+... ........++++.++.||+... .
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~-~~~~I~~~d~dG~~~~~~~~~-~~~l~~P~gl~v~~~~lywtd~---~ 309 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDS-KLHSISSIDVNGGNRKTILED-EKRLAHPFSLAVFEDKVFWTDI---I 309 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCCCEEEEEC-SSTTSSEEEEEEETTEEEEEES---S
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCccEEEEeC-CCCCCCCEEEEEeCCEEEEecC---C
Confidence 4322222 111222333333 789999974 467899999876554444311 1222445677788999999862 2
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
...|+++|..++
T Consensus 310 ~~~V~~~~~~~G 321 (400)
T 3p5b_L 310 NEAIFSANRLTG 321 (400)
T ss_dssp SCSEEEEESSSC
T ss_pred CCeEEEEEcCCC
Confidence 346888886554
No 215
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.34 E-value=5 Score=34.57 Aligned_cols=145 Identities=10% Similarity=0.105 Sum_probs=84.7
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcC--CCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIE--SLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++||+.-.. ...++++|+....-+.+. .+..|+ .+++ .++.||+.--. ....++++++..
T Consensus 482 ~~~LY~tD~~------~~~I~v~~ldG~~~~~l~~~~l~~P~---gIaVDp~~g~LYwtD~g------~~~~I~~~~~dG 546 (791)
T 3m0c_C 482 HSNIYWTDSV------LGTVSVADTKGVKRKTLFRENGSKPR---AIVVDPVHGFMYWTDWG------TPAKIKKGGLNG 546 (791)
T ss_dssp TTEEEEEETT------TTEEEEEETTSSSEEEEEECTTCCEE---EEEEETTTTEEEEEECS------SSCEEEEEETTS
T ss_pred CCcEEEEecC------CCeEEEEeCCCCeEEEEEeCCCCCcc---eEEEecCCCCEEEecCC------CCCeEEEEecCC
Confidence 4678877422 246788888765544442 232322 2233 36889987411 124688888765
Q ss_pred CeEEeccCcc-ceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCC
Q 028925 90 HTWCQMKNGC-VMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEP 166 (202)
Q Consensus 90 ~~W~~~~~~~-~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~ 166 (202)
..-..+.... ....+.++- +++||+... ....|+.+|++...=+.+... ........++++.+++||+....
T Consensus 547 ~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~-~~~~I~~~d~dG~~~~~v~~~-~~~l~~P~glav~~~~lYwtD~~--- 621 (791)
T 3m0c_C 547 VDIYSLVTENIQWPNGITLDLLSGRLYWVDS-KLHSISSIDVNGGNRKTILED-EKRLAHPFSLAVFEDKVFWTDII--- 621 (791)
T ss_dssp CCEEEEECSSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEEC-TTTTSSEEEEEEETTEEEEEETT---
T ss_pred CceEEEEeCCCCCceEEEEecCCCeEEEEeC-CCCcEEEEecCCCceEEEecC-CCccCCCCEEEEeCCEEEEEECC---
Confidence 5433333222 223333333 789999974 467899999876554444311 12234456788889999998632
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
...|++.|..++
T Consensus 622 ~~~I~~~dk~tG 633 (791)
T 3m0c_C 622 NEAIFSANRLTG 633 (791)
T ss_dssp TTEEEEEETTTC
T ss_pred CCEEEEEeCCCC
Confidence 346777776554
No 216
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.32 E-value=2.6 Score=31.32 Aligned_cols=132 Identities=9% Similarity=0.058 Sum_probs=60.9
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeee-EEE
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAH-AVV 108 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~-~~~ 108 (202)
.+.+||+.+.+-.. .+........... -++++++.|+.+ ..+.+||..+.+-...-......... ...
T Consensus 177 ~i~~wd~~~~~~~~--~~~~h~~~v~~~~~sp~g~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp 247 (319)
T 3frx_A 177 MVKAWNLNQFQIEA--DFIGHNSNINTLTASPDGTLIASAGKD-------GEIMLWNLAAKKAMYTLSAQDEVFSLAFSP 247 (319)
T ss_dssp CEEEEETTTTEEEE--EECCCCSCEEEEEECTTSSEEEEEETT-------CEEEEEETTTTEEEEEEECCSCEEEEEECS
T ss_pred EEEEEECCcchhhe--eecCCCCcEEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCcEEEEecCCCcEEEEEEcC
Confidence 46778876544321 1111111112222 367777776643 46889998876522211111111222 223
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCc-EEEeccCCCCCC---CC-CeeEEE-ECCeEEEEcccCCCCceeEEEeCCC
Q 028925 109 GKKLFCMEWKNQRKLTIFDPEDNS-WKMVPVPLTGSS---SI-GFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~~~-W~~~~~~~~~~~---~~-~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
++.+++.+. ...+.+|+.+... ...+........ .. ..+++. .+++.++.|+.. ..+.+||..+
T Consensus 248 ~~~~la~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~D---g~i~vWd~~t 317 (319)
T 3frx_A 248 NRYWLAAAT--ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTD---NVIRVWQVMT 317 (319)
T ss_dssp SSSEEEEEE--TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETT---SCEEEEEEEE
T ss_pred CCCEEEEEc--CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecC---ceEEEEEEee
Confidence 555555543 4456777765543 222221111100 11 112222 377888877643 2577777655
No 217
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=92.22 E-value=3.2 Score=32.13 Aligned_cols=92 Identities=13% Similarity=0.034 Sum_probs=48.5
Q ss_pred ceEEEEeCCCCeEEeccCccceeeee-EEE-CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCe
Q 028925 80 KFVDVYNPERHTWCQMKNGCVMVTAH-AVV-GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGK 156 (202)
Q Consensus 80 ~~~~~yd~~~~~W~~~~~~~~~~~~~-~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~ 156 (202)
..+.+||..+.+-...-......... ... ++.+++..|...+.+.+||..+.+ .+...... ...-.+++. .+++
T Consensus 301 ~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~--~v~~l~gH-~~~V~~l~~spdg~ 377 (420)
T 4gga_A 301 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--KVAELKGH-TSRVLSLTMSPDGA 377 (420)
T ss_dssp CEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--EEEEECCC-SSCEEEEEECTTSS
T ss_pred CEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc--EEEEEcCC-CCCEEEEEEcCCCC
Confidence 56889999887644433211111222 222 445555556567889999987654 23211111 111112222 2677
Q ss_pred EEEEcccCCCCceeEEEeCCC
Q 028925 157 LLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 157 i~v~gG~~~~~~~~~~yd~~~ 177 (202)
.++.|+.. ..+.+||..+
T Consensus 378 ~l~S~s~D---~tvriWdv~~ 395 (420)
T 4gga_A 378 TVASAAAD---ETLRLWRCFE 395 (420)
T ss_dssp CEEEEETT---TEEEEECCSC
T ss_pred EEEEEecC---CeEEEEECCC
Confidence 77777643 2577787644
No 218
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.18 E-value=2.8 Score=31.39 Aligned_cols=146 Identities=9% Similarity=-0.021 Sum_probs=72.0
Q ss_pred ECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEc---CCCCCCcee--eeeEEECCEEEEEcCccCCCCCCcceEEEEeC
Q 028925 13 VNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLI---ESLRRPRWG--CFACSFDGKLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 13 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~---~~~~~~r~~--~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
.++++++.||.+ ..+.+||..+.+-... .....-... ...+..++.|.+... ...+.+||.
T Consensus 46 ~d~~~l~sg~~D------g~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~--------~~~~~~~~~ 111 (343)
T 3lrv_A 46 YDKWVCMCRCED------GALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYP--------GNQITILDS 111 (343)
T ss_dssp EEEEEEEEEEET------TEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEET--------TTEEEEEET
T ss_pred CCCCEEEEECCC------CcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEc--------cCceEEeec
Confidence 356777777764 3577788776653211 111100001 122223555555432 124556676
Q ss_pred CCCe-EEecc-CccceeeeeE-EE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEc
Q 028925 88 ERHT-WCQMK-NGCVMVTAHA-VV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFS 161 (202)
Q Consensus 88 ~~~~-W~~~~-~~~~~~~~~~-~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~g 161 (202)
.+.+ ..... .......... .. ++.+++.|+ ..+.+.+||..+.+-......... ..-.+++. .++++++.|
T Consensus 112 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s-~dg~i~~wd~~~~~~~~~~~~~~~--~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 112 KTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWAD-NRGTIGFQSYEDDSQYIVHSAKSD--VEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp TTCCEEEEEECCCSSCEEEEECCC---CCEEEEEE-TTCCEEEEESSSSCEEEEECCCSS--CCCCEEEECTTSCEEEEE
T ss_pred CCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEe-CCCcEEEEECCCCcEEEEEecCCC--CceEEEEECCCCCEEEEE
Confidence 6655 22222 1111111111 12 455666554 678899999988776444311111 11222333 367787777
Q ss_pred ccCCCCceeEEEeCCCC
Q 028925 162 LEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 162 G~~~~~~~~~~yd~~~~ 178 (202)
+.. ..+.+||..+.
T Consensus 189 ~~d---g~i~iwd~~~~ 202 (343)
T 3lrv_A 189 SPD---GILDVYNLSSP 202 (343)
T ss_dssp CTT---SCEEEEESSCT
T ss_pred cCC---CEEEEEECCCC
Confidence 532 36888998876
No 219
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.15 E-value=3 Score=31.59 Aligned_cols=147 Identities=11% Similarity=0.123 Sum_probs=72.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
++.+++.|+.+ ..+.+||+.+.+-...-..+........... ++.+++.|+.+ ..+.+||..+.+
T Consensus 111 ~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~v~~~d~~~~~ 177 (408)
T 4a11_B 111 DTGMFTSSSFD------KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-------PKVQLCDLKSGS 177 (408)
T ss_dssp CTTCEEEEETT------SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-------SSEEEEESSSSC
T ss_pred CCcEEEEEeCC------CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-------CeEEEEeCCCcc
Confidence 44566666543 3588889887765444333333222222222 44466666533 358888887654
Q ss_pred EEe-ccCccceeeeeEEE-CCE-EEEEeCCCCCeEEEEeCCCCc--EEEecc-----------CCCCCCCCCeeEEEE--
Q 028925 92 WCQ-MKNGCVMVTAHAVV-GKK-LFCMEWKNQRKLTIFDPEDNS--WKMVPV-----------PLTGSSSIGFRFGIL-- 153 (202)
Q Consensus 92 W~~-~~~~~~~~~~~~~~-~~~-iyv~Gg~~~~~~~~yd~~~~~--W~~~~~-----------~~~~~~~~~~~~~~~-- 153 (202)
-.. +........+.... ++. +++.|+ ..+.+.+||..+.. ...+.. .... .......+..
T Consensus 178 ~~~~~~~~~~~v~~~~~~~~~~~ll~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 255 (408)
T 4a11_B 178 CSHILQGHRQEILAVSWSPRYDYILATAS-ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTA-HNGKVNGLCFTS 255 (408)
T ss_dssp CCEEECCCCSCEEEEEECSSCTTEEEEEE-TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCS-CSSCEEEEEECT
T ss_pred eeeeecCCCCcEEEEEECCCCCcEEEEEc-CCCcEEEEECCCCCcccccccccccccceeecccccc-ccCceeEEEEcC
Confidence 221 11111122222222 333 566664 56789999986653 222210 0011 1112222222
Q ss_pred CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 154 DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 154 ~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+++.++.++.. ..+.+||..+.
T Consensus 256 ~~~~l~~~~~d---g~i~vwd~~~~ 277 (408)
T 4a11_B 256 DGLHLLTVGTD---NRMRLWNSSNG 277 (408)
T ss_dssp TSSEEEEEETT---SCEEEEETTTC
T ss_pred CCCEEEEecCC---CeEEEEECCCC
Confidence 56666666542 25888888765
No 220
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=92.05 E-value=3.8 Score=34.37 Aligned_cols=151 Identities=11% Similarity=-0.030 Sum_probs=78.6
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEEE-CCEEEEEcCccCCC---------CCCcceEEEEeCCCCeEE--ec-c-
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACSF-DGKLYVMGGRSSFT---------IGNSKFVDVYNPERHTWC--QM-K- 96 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iy~~gG~~~~~---------~~~~~~~~~yd~~~~~W~--~~-~- 96 (202)
.+++++|+.+++...... .... ....+.. +|+.++++...... ......+++++..+.+-+ .+ .
T Consensus 151 ~~i~v~d~~tg~~~~~~~-~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~ 228 (710)
T 2xdw_A 151 VTIKFMKVDGAKELPDVL-ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEF 228 (710)
T ss_dssp EEEEEEETTTTEEEEEEE-EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EEEEEEECCCCCCCcccc-cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEecc
Confidence 479999999988765321 1111 1122222 66644454332210 011345888888776532 11 1
Q ss_pred C-cccee-eeeEEECCE-EEEEeC--CC-CCeEEEEeCCC------C--cEEEeccCCCCCCCCCeeEEEECCeEEEEcc
Q 028925 97 N-GCVMV-TAHAVVGKK-LFCMEW--KN-QRKLTIFDPED------N--SWKMVPVPLTGSSSIGFRFGILDGKLLLFSL 162 (202)
Q Consensus 97 ~-~~~~~-~~~~~~~~~-iyv~Gg--~~-~~~~~~yd~~~------~--~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG 162 (202)
+ .+... ......+++ |++... .. ...++++|..+ . .++.+...... ....+...+++||+.+.
T Consensus 229 ~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~---~~~~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 229 PDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEG---EYDYVTNEGTVFTFKTN 305 (710)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSS---CEEEEEEETTEEEEEEC
T ss_pred CCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCc---EEEEEeccCCEEEEEEC
Confidence 1 12212 222333554 443332 11 56889999875 3 57777532211 12223345678888775
Q ss_pred cCCCCceeEEEeCCCCCCCcceee
Q 028925 163 EEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 163 ~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
...+...++.+|.++.....|+.+
T Consensus 306 ~~~~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp TTCTTCEEEEEETTSCCGGGCEEE
T ss_pred CCCCCCEEEEEeCCCCCcccceec
Confidence 544456899999877511148887
No 221
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.01 E-value=4.7 Score=33.60 Aligned_cols=144 Identities=11% Similarity=0.114 Sum_probs=69.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEc-CCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLI-ESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
++++.+.|+.+ ..+.+||+.+.+-... ...... ....+...+++.++.|+.+ ..+.+||.....-
T Consensus 441 ~g~~l~sgs~D------g~v~vwd~~~~~~~~~~~~h~~~-v~~~~~s~~~~~l~s~s~D-------~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 441 DGQFALSGSWD------GELRLWDLAAGVSTRRFVGHTKD-VLSVAFSLDNRQIVSASRD-------RTIKLWNTLGECK 506 (694)
T ss_dssp TSSEEEEEETT------SEEEEEETTTTEEEEEEECCSSC-EEEEEECTTSSCEEEEETT-------SCEEEECTTSCEE
T ss_pred CCCEEEEEeCC------CcEEEEECCCCcceeEEeCCCCC-EEEEEEeCCCCEEEEEeCC-------CEEEEEECCCCcc
Confidence 45555555543 3578888876643221 111111 1111112256666665533 4588888755432
Q ss_pred EeccC----ccceeeeeEEE-CC--EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccC
Q 028925 93 CQMKN----GCVMVTAHAVV-GK--KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEE 164 (202)
Q Consensus 93 ~~~~~----~~~~~~~~~~~-~~--~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~ 164 (202)
..+.. ......+.... ++ .+++.|+ ..+.+.+||..+.+-...- . .. ...-.+++. .++++++.|+..
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s-~d~~v~vwd~~~~~~~~~~-~-~h-~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS-WDKTVKVWNLSNCKLRSTL-A-GH-TGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECSCSSSCEEEEEE-TTSCEEEEETTTCCEEEEE-C-CC-SSCEEEEEECTTSSEEEEEETT
T ss_pred eeeccCCCCCCCcEEEEEEeCCCCcceEEEEe-CCCeEEEEECCCCcEEEEE-c-CC-CCCEEEEEEeCCCCEEEEEeCC
Confidence 22221 11111222222 22 3444443 6788999999877644331 1 11 111122222 267777777643
Q ss_pred CCCceeEEEeCCCC
Q 028925 165 EPSYSTLLYDPNAA 178 (202)
Q Consensus 165 ~~~~~~~~yd~~~~ 178 (202)
..+.+||..+.
T Consensus 583 ---g~i~iwd~~~~ 593 (694)
T 3dm0_A 583 ---GVVLLWDLAEG 593 (694)
T ss_dssp ---SBCEEEETTTT
T ss_pred ---CeEEEEECCCC
Confidence 26788888765
No 222
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=91.91 E-value=2.3 Score=29.79 Aligned_cols=106 Identities=15% Similarity=0.059 Sum_probs=57.8
Q ss_pred ceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCCCe---EEcCC----CCCCceeeeeEE-ECCEEEEEcCccCCCCCC
Q 028925 7 DFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDKW---NLIES----LRRPRWGCFACS-FDGKLYVMGGRSSFTIGN 78 (202)
Q Consensus 7 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W---~~~~~----~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~ 78 (202)
.++....++++|++-|. ..|+||..+... +.+.. +|.....++... .++++|++-|.
T Consensus 54 DAa~~~~~g~~yfFkg~--------~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG~------- 118 (196)
T 3c7x_A 54 NTAYERKDGKFVFFKGD--------KHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRGN------- 118 (196)
T ss_dssp CEEEECTTSCEEEEETT--------EEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEETT-------
T ss_pred cEEEEeCCCcEEEecCC--------EEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEECC-------
Confidence 33333347889999763 478887542111 12222 332223333222 26899999663
Q ss_pred cceEEEEeCCCCeEEeccC--------ccceeeeeEEE-CC-EEEEEeCCCCCeEEEEeCCCCc
Q 028925 79 SKFVDVYNPERHTWCQMKN--------GCVMVTAHAVV-GK-KLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 79 ~~~~~~yd~~~~~W~~~~~--------~~~~~~~~~~~-~~-~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
..++||..+++-..--| .+....++... ++ .+|++- ....+.||..+.+
T Consensus 119 --~yw~yd~~~~~v~~gyPk~i~~~~gip~~idaAf~~~~~~~~YfFk---g~~y~r~d~~~~~ 177 (196)
T 3c7x_A 119 --KYYRFNEELRAVDSEYPKNIKVWEGIPESPRGSFMGSDEVFTYFYK---GNKYWKFNNQKLK 177 (196)
T ss_dssp --EEEEEETTTTEECTTCSEEGGGSBTCCSSCSEEEECTTSSEEEEEE---TTEEEEEETTTTE
T ss_pred --EEEEEeCCcccccCCCCccHHHCCCcCCCcceeEEecCCCEEEEEE---CCEEEEEECCcce
Confidence 47889987764322101 11112333333 44 899994 4667899987754
No 223
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=91.75 E-value=3.1 Score=34.83 Aligned_cols=57 Identities=11% Similarity=-0.070 Sum_probs=32.9
Q ss_pred eeeEEEeCCCC---CeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc
Q 028925 31 SSAEVYDPDTD---KWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK 96 (202)
Q Consensus 31 ~~~~~yd~~t~---~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~ 96 (202)
.+++++|..++ +-..+...... .......-+|+.++++.. ..++++|..+.+...+.
T Consensus 129 ~~i~~~d~~~~~~~~~~~l~~~~~~-~~~~~~SPDG~~la~~~~--------~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 129 GELYLYDLKQEGKAAVRQLTHGEGF-ATDAKLSPKGGFVSFIRG--------RNLWVIDLASGRQMQLT 188 (741)
T ss_dssp TEEEEEESSSCSTTSCCBCCCSSSC-EEEEEECTTSSEEEEEET--------TEEEEEETTTTEEEECC
T ss_pred CcEEEEECCCCCcceEEEcccCCcc-cccccCCCCCCEEEEEeC--------CcEEEEecCCCCEEEec
Confidence 57899999887 54443322111 111222236765555431 26899999888777665
No 224
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=91.62 E-value=2.5 Score=29.59 Aligned_cols=101 Identities=12% Similarity=0.036 Sum_probs=57.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCe-EEcCC--CCCC--ceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKW-NLIES--LRRP--RWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W-~~~~~--~~~~--r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
++++|++-|. ..|+|+..+..- +.+.. +|.. ...++....++++|++-|. ..+.||..
T Consensus 64 ~~~~yfFkG~--------~yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg~---------~ywr~d~~ 126 (195)
T 1itv_A 64 SKKLFFFSGR--------QVWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSGR---------RLWRFDVK 126 (195)
T ss_dssp TCCEEEEETT--------EEEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEETT---------EEEEEETT
T ss_pred CCeEEEEeCC--------EEEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeCC---------EEEEEeCC
Confidence 6889999773 478887542111 01111 2221 2333333347899999662 58899987
Q ss_pred CCeEEeccC---------ccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 028925 89 RHTWCQMKN---------GCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWK 134 (202)
Q Consensus 89 ~~~W~~~~~---------~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~ 134 (202)
+++-..--| .+....++...++.+|++- .+..+.||..+.+=.
T Consensus 127 ~~~~~~gyPr~i~~~w~Gvp~~idaa~~~~g~~Yffk---g~~y~~~~~~~~~v~ 178 (195)
T 1itv_A 127 AQMVDPRSASEVDRMFPGVPLDTHDVFQFREKAYFCQ---DRFYWRVSSRSELNQ 178 (195)
T ss_dssp TTEECGGGCEEHHHHSTTSCSSCSEEEEETTEEEEEE---TTEEEEEECCTTCCE
T ss_pred cccccCCCccChhhcCCCCCCCCCEEEEeCCeEEEEe---CCEEEEEECCccEEe
Confidence 764221101 1222344555689999995 456788988776543
No 225
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.61 E-value=3.5 Score=31.25 Aligned_cols=105 Identities=8% Similarity=-0.172 Sum_probs=55.9
Q ss_pred EEECCEEEEEcCcCCCCCceeeeEEEeCCCCC-------eEEcCCCCCCceeeeeEEEC----C---EEEEEcCccCCCC
Q 028925 11 AEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK-------WNLIESLRRPRWGCFACSFD----G---KLYVMGGRSSFTI 76 (202)
Q Consensus 11 ~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-------W~~~~~~~~~r~~~~~~~~~----~---~iy~~gG~~~~~~ 76 (202)
+....++++.|+.+ ..+.+||+.+.+ -..+.....+... ....-+ + ++++.|+.+
T Consensus 22 ~~~~~~~l~s~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~-~~~~~~~~~~g~~~~~l~s~~~d---- 90 (397)
T 1sq9_A 22 VSACNSFTVSCSGD------GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH-VDVLQAIERDAFELCLVATTSFS---- 90 (397)
T ss_dssp EEECSSEEEEEETT------SEEEEEESBCCTTCCGGGGEEEEECCTTCEEE-EEEEEEEETTTEEEEEEEEEETT----
T ss_pred EEecCCeEEEEcCC------CEEEEEECCCcccccCCCcceEEecCCCcEEE-EEEecccccCCccccEEEEEcCC----
Confidence 34455667777653 357888888776 2233222222211 112234 6 777776543
Q ss_pred CCcceEEEEeCCCCe------EEeccCc-----cceeeeeEE-----ECCEE-EEEeCCCCCeEEEEeCCC
Q 028925 77 GNSKFVDVYNPERHT------WCQMKNG-----CVMVTAHAV-----VGKKL-FCMEWKNQRKLTIFDPED 130 (202)
Q Consensus 77 ~~~~~~~~yd~~~~~------W~~~~~~-----~~~~~~~~~-----~~~~i-yv~Gg~~~~~~~~yd~~~ 130 (202)
..+.+||..+.+ +..+... ......+.. .++.. ++.++ ..+.+.+||..+
T Consensus 91 ---g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~ 157 (397)
T 1sq9_A 91 ---GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD-VKGTTYIWKFHP 157 (397)
T ss_dssp ---SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE-TTSCEEEEEEES
T ss_pred ---CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe-CCCcEEEEeCCc
Confidence 357888877665 6665533 122333333 34555 55654 567888888765
No 226
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=91.55 E-value=1.7 Score=32.29 Aligned_cols=67 Identities=4% Similarity=-0.088 Sum_probs=40.6
Q ss_pred ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccc--eeeee-EEECC-EEEEEeCCCCCeEEEEeCCCCcEEE
Q 028925 61 FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCV--MVTAH-AVVGK-KLFCMEWKNQRKLTIFDPEDNSWKM 135 (202)
Q Consensus 61 ~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~--~~~~~-~~~~~-~iyv~Gg~~~~~~~~yd~~~~~W~~ 135 (202)
.++++|+.++. ...+.++|+.+.+....-+... ..... ...++ .+|+.+. ....+.+||+++.+-..
T Consensus 9 ~~~~~~v~~~~-------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~-~~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 9 AGHEYMIVTNY-------PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN-HYGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TTCEEEEEEET-------TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-------CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC-CCCcEEEEeCCCCcEEE
Confidence 36777777653 2468999998886543322111 11222 22344 5777763 56789999998877543
No 227
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=91.46 E-value=2.8 Score=29.90 Aligned_cols=137 Identities=15% Similarity=0.104 Sum_probs=73.5
Q ss_pred EEEECCEEEEEcCcCCCCCceeeeEEEeCCCCC-eE--Ec----CCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcce
Q 028925 10 CAEVNGKIYAVGGYGMDGESLSSAEVYDPDTDK-WN--LI----ESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKF 81 (202)
Q Consensus 10 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~--~~----~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~ 81 (202)
+..+++++|+|-|. .+|+++..... .. .+ +.+|. ...++... .++++|++-| +.
T Consensus 36 i~~~~g~~~fFkg~--------~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG---------~~ 97 (218)
T 1gen_A 36 IAQIRGEIFFFKDR--------FIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG---------NE 97 (218)
T ss_dssp EEEETTEEEEEETT--------EEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET---------TE
T ss_pred EEeCCCcEEEEECC--------EEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC---------CE
Confidence 34569999999763 46777654422 11 12 22332 22222222 3689999966 35
Q ss_pred EEEEeCCCCeEEecc--Cc-------c---ceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEEE-----ecc--CC
Q 028925 82 VDVYNPERHTWCQMK--NG-------C---VMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWKM-----VPV--PL 140 (202)
Q Consensus 82 ~~~yd~~~~~W~~~~--~~-------~---~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-----~~~--~~ 140 (202)
.++||.. + ..+ |. + ....++.. .++++|++- .+..+.||..+++-.. +.. +.
T Consensus 98 yW~y~~~--~--~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFk---G~~ywr~d~~~~~v~~gyPr~i~~~w~g 170 (218)
T 1gen_A 98 YWIYSAS--T--LERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFA---GDKFWRYNEVKKKMDPGFPKLIADAWNA 170 (218)
T ss_dssp EEEEETT--E--ECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEE---TTEEEEEETTTTEECSSCCEEHHHHSSS
T ss_pred EEEEcCc--c--ccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEE---CCEEEEEECccccccCCCCcchhhccCC
Confidence 7888742 1 111 10 1 11233333 368999994 4578999987764221 110 11
Q ss_pred CCCCCCCeeEEEE--CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 141 TGSSSIGFRFGIL--DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 141 ~~~~~~~~~~~~~--~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.+ ...- ++... ++++|.+-|. ..++||..+.
T Consensus 171 ~p-~~id-aAf~~~~~g~~YfFkg~-----~y~~~~~~~~ 203 (218)
T 1gen_A 171 IP-DNLD-AVVDLQGGGHSYFFKGA-----YYLKLENQSL 203 (218)
T ss_dssp CC-SSCS-EEEECTTTCEEEEEETT-----EEEEEETTEE
T ss_pred CC-CCCC-EEEEEcCCCcEEEEECC-----EEEEEECCce
Confidence 11 1222 33333 4899998754 5788887664
No 228
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=91.41 E-value=3.3 Score=30.65 Aligned_cols=103 Identities=13% Similarity=0.047 Sum_probs=58.0
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEE-ECCEEEEEeCCC-CCeEEEEeCCCCcEEEeccC
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAV-VGKKLFCMEWKN-QRKLTIFDPEDNSWKMVPVP 139 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~iyv~Gg~~-~~~~~~yd~~~~~W~~~~~~ 139 (202)
+++||+..-. ...+.++|+.... ...........+..+ -++++|+..... ...+..+|+.+.+.+.+...
T Consensus 42 ~g~lyv~d~~-------~~~I~~~d~~g~~-~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 42 DGTIFVTNHE-------VGEIVSITPDGNQ-QIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp TSCEEEEETT-------TTEEEEECTTCCE-EEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CCCEEEEeCC-------CCeEEEECCCCce-EEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 6789987421 2468999987653 222111222233333 367899986422 23688999888888776522
Q ss_pred CCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCC
Q 028925 140 LTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 140 ~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
. . .+.....+. .++.+|+... ....++++|+.+
T Consensus 114 ~-~-~~~~~g~~~~~~~~~~v~d~---~~g~i~~~d~~~ 147 (306)
T 2p4o_A 114 P-D-AIFLNGITPLSDTQYLTADS---YRGAIWLIDVVQ 147 (306)
T ss_dssp T-T-CSCEEEEEESSSSEEEEEET---TTTEEEEEETTT
T ss_pred C-C-ccccCcccccCCCcEEEEEC---CCCeEEEEeCCC
Confidence 1 1 122223332 3556777541 233788888865
No 229
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=91.30 E-value=2.8 Score=29.63 Aligned_cols=102 Identities=13% Similarity=-0.019 Sum_probs=58.4
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCe---EEcCC--CCCC--ceeeeeEEE-CCEEEEEcCccCCCCCCcceEEEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKW---NLIES--LRRP--RWGCFACSF-DGKLYVMGGRSSFTIGNSKFVDVY 85 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W---~~~~~--~~~~--r~~~~~~~~-~~~iy~~gG~~~~~~~~~~~~~~y 85 (202)
+++||++-|. .+|+|+-.+-.- +.+.. +|.. ...++.... ++++|++-| +..++|
T Consensus 79 ~~~iyfFkG~--------~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG---------~~ywr~ 141 (207)
T 1pex_A 79 HDLIFIFRGR--------KFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG---------NQVWRY 141 (207)
T ss_dssp TTEEEEEETT--------EEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET---------TEEEEE
T ss_pred CCcEEEEccC--------EEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC---------CEEEEE
Confidence 6899999763 478887432211 22322 2221 222222222 589999976 358999
Q ss_pred eCCCCeEEeccC---------ccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEE
Q 028925 86 NPERHTWCQMKN---------GCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKM 135 (202)
Q Consensus 86 d~~~~~W~~~~~---------~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~ 135 (202)
|..+++-..--| .+....++...++.+|++- .+..+.||..+++=..
T Consensus 142 d~~~~~~d~gyPr~i~~~~~Gip~~iDaAf~~~g~~YfFk---g~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 142 DDTNHIMDKDYPRLIEEDFPGIGDKVDAVYEKNGYIYFFN---GPIQFEYSIWSNRIVR 197 (207)
T ss_dssp ETTTTEECSSCCCBHHHHSTTSCSCCSEEEEETTEEEEEE---TTEEEEEETTTTEEEE
T ss_pred eCcCccccCCCCccHHHcCCCCCCCccEEEEcCCcEEEEE---CCEEEEEeCCccEEec
Confidence 987654221101 1222344455689999994 4578889987766443
No 230
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=91.28 E-value=2.1 Score=35.33 Aligned_cols=141 Identities=8% Similarity=0.002 Sum_probs=72.8
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCc----cceeeee
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNG----CVMVTAH 105 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~----~~~~~~~ 105 (202)
..+++.|..+.+...+..++..+.-|.... -+++.+++.-. ..+.+.++|..+.+-...-+. ++...++
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~------~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~ 393 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAAN------ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA 393 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEG------GGTEEEEEETTTTEEEEEEECSSSSBCCTTCE
T ss_pred CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeC------CCCeEEEEECCCCcEEEEEeccCcCCCCccce
Confidence 467888887766554444444555444433 34553333221 135689999998864332222 2111122
Q ss_pred E-EE--CCEEEEEeCCCCCeEEEEeCCCCc-----EEEeccCCCCCCCCCeeEEEE--CCeEEEEcccCCC---CceeEE
Q 028925 106 A-VV--GKKLFCMEWKNQRKLTIFDPEDNS-----WKMVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEEP---SYSTLL 172 (202)
Q Consensus 106 ~-~~--~~~iyv~Gg~~~~~~~~yd~~~~~-----W~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~~---~~~~~~ 172 (202)
. +. .+.+|+..-.....+.++|.++.. |+.+...... ......+... +..+||-...+.+ ...+.+
T Consensus 394 ~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~-g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v 472 (567)
T 1qks_A 394 NFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL-GGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV 472 (567)
T ss_dssp EEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS-CSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE
T ss_pred eeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC-CCCCEEEEeCCCCCeEEEecCCCCCcccCceEEE
Confidence 2 22 367887753235678899887633 8776522111 1111222222 3467774422211 347888
Q ss_pred EeCCCC
Q 028925 173 YDPNAA 178 (202)
Q Consensus 173 yd~~~~ 178 (202)
||..+.
T Consensus 473 ~d~~~~ 478 (567)
T 1qks_A 473 FDIKAM 478 (567)
T ss_dssp EEGGGC
T ss_pred EECCcc
Confidence 887653
No 231
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=91.15 E-value=1 Score=32.41 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=54.9
Q ss_pred EECCEEEEEcCccCCCCCCcceEEEEe--CCC-------------CeEEeccCc--cceeeeeEEE--CCEEEEEeCCCC
Q 028925 60 SFDGKLYVMGGRSSFTIGNSKFVDVYN--PER-------------HTWCQMKNG--CVMVTAHAVV--GKKLFCMEWKNQ 120 (202)
Q Consensus 60 ~~~~~iy~~gG~~~~~~~~~~~~~~yd--~~~-------------~~W~~~~~~--~~~~~~~~~~--~~~iyv~Gg~~~ 120 (202)
..++++|++-|. .+++|+ +.+ ..|..++.. +....++... ++++|++-|
T Consensus 70 ~~~g~~~fFKg~---------~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG--- 137 (227)
T 3lp9_A 70 TENNEAFIFYEN---------FCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG--- 137 (227)
T ss_dssp CSTTEEEEEETT---------EEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET---
T ss_pred CCCCEEEEEeCC---------EEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC---
Confidence 368999999663 477777 321 113323210 2222333333 689999954
Q ss_pred CeEEEEeCCCCcEEE-----eccCCCCC------CCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 121 RKLTIFDPEDNSWKM-----VPVPLTGS------SSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 121 ~~~~~yd~~~~~W~~-----~~~~~~~~------~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+..++||..+++-.. +....+.. ...-+++.. .++++|++-|. .-|+||..++
T Consensus 138 ~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~-----~Ywr~d~~~~ 202 (227)
T 3lp9_A 138 DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD-----HYARVKVTPX 202 (227)
T ss_dssp TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT-----EEEEEECCSS
T ss_pred CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC-----EEEEEECCcc
Confidence 578999987553211 11001110 122222222 46899999754 5788988764
No 232
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=90.87 E-value=3.3 Score=29.68 Aligned_cols=103 Identities=10% Similarity=0.008 Sum_probs=59.4
Q ss_pred ceEEEEECCEEEEEcCcCCCCCceeeeEEEeCCCC----CeEEc--------CCCCCC----ceeeeeE-EECCEEEEEc
Q 028925 7 DFACAEVNGKIYAVGGYGMDGESLSSAEVYDPDTD----KWNLI--------ESLRRP----RWGCFAC-SFDGKLYVMG 69 (202)
Q Consensus 7 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~----~W~~~--------~~~~~~----r~~~~~~-~~~~~iy~~g 69 (202)
.++....++++|++-|. .+|+||..++ +.... +.||.. ...++.. ..++++|++-
T Consensus 63 DAa~~~~~g~~~fFkg~--------~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFk 134 (225)
T 3oyo_A 63 DCSFHTEASEAYVFSGN--------HSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFK 134 (225)
T ss_dssp SEEEECSTTEEEEEETT--------EEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEE
T ss_pred eEEEEcCCCeEEEEcCC--------EEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEe
Confidence 33333358999999763 5899976432 22211 122321 2222222 1379999997
Q ss_pred CccCCCCCCcceEEEEeCCCCeEEecc-------Cc------cceeeeeEE--ECCEEEEEeCCCCCeEEEEeCC
Q 028925 70 GRSSFTIGNSKFVDVYNPERHTWCQMK-------NG------CVMVTAHAV--VGKKLFCMEWKNQRKLTIFDPE 129 (202)
Q Consensus 70 G~~~~~~~~~~~~~~yd~~~~~W~~~~-------~~------~~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~ 129 (202)
|. ..++||..+++...-| +. +....++.. .++++|++- -...+.||..
T Consensus 135 G~---------~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFk---G~~ywr~d~~ 197 (225)
T 3oyo_A 135 GN---------KYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFK---GQNYVRIDFT 197 (225)
T ss_dssp TT---------EEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEE---TTEEEEEECC
T ss_pred CC---------eEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEE---CCEEEEEeCC
Confidence 63 5889987766655422 11 222334444 378999994 4678899987
No 233
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=90.77 E-value=0.79 Score=33.04 Aligned_cols=100 Identities=9% Similarity=0.029 Sum_probs=55.9
Q ss_pred EECCEEEEEcCcCCCCCceeeeEEEe--CCCCCeE------Ec----CCCC----CCceeeeeEE-ECCEEEEEcCccCC
Q 028925 12 EVNGKIYAVGGYGMDGESLSSAEVYD--PDTDKWN------LI----ESLR----RPRWGCFACS-FDGKLYVMGGRSSF 74 (202)
Q Consensus 12 ~~~~~iyv~GG~~~~~~~~~~~~~yd--~~t~~W~------~~----~~~~----~~r~~~~~~~-~~~~iy~~gG~~~~ 74 (202)
..++++|+|-|. .+|+|+ +.+..-. .+ +.|| .....++... .++++|++-|.
T Consensus 70 ~~~g~~~fFKg~--------~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG~--- 138 (227)
T 3lp9_A 70 TENNEAFIFYEN--------FCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKGD--- 138 (227)
T ss_dssp CSTTEEEEEETT--------EEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEETT---
T ss_pred CCCCEEEEEeCC--------EEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEECC---
Confidence 468999999763 588888 3211111 11 1222 1122222222 37899999763
Q ss_pred CCCCcceEEEEeCCCCeEEec-c-------Cc------cceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCC
Q 028925 75 TIGNSKFVDVYNPERHTWCQM-K-------NG------CVMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDN 131 (202)
Q Consensus 75 ~~~~~~~~~~yd~~~~~W~~~-~-------~~------~~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~ 131 (202)
..++||..+++-..- | |. +....++.. .++++|++- -+..+.||..++
T Consensus 139 ------~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFk---g~~Ywr~d~~~~ 202 (227)
T 3lp9_A 139 ------QYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFK---DDHYARVKVTPX 202 (227)
T ss_dssp ------EEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEE---TTEEEEEECCSS
T ss_pred ------EEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEE---CCEEEEEECCcc
Confidence 588999876543221 1 11 012233333 358999994 467888998766
No 234
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=90.68 E-value=6.6 Score=32.75 Aligned_cols=94 Identities=17% Similarity=0.193 Sum_probs=47.2
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEE-ECC
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAV-VGK 110 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~~~ 110 (202)
.+.+||+.+.+-...-.-........+..-++++++.|+.+ ..+.+||..+.+-...-.......+... .++
T Consensus 542 ~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~D-------g~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~ 614 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD-------GVVLLWDLAEGKKLYSLEANSVIHALCFSPNR 614 (694)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-------SBCEEEETTTTEEEECCBCSSCEEEEEECSSS
T ss_pred eEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCC-------CeEEEEECCCCceEEEecCCCcEEEEEEcCCC
Confidence 57778887665432211111111111122367777776643 4588899887753322111111222222 244
Q ss_pred EEEEEeCCCCCeEEEEeCCCCcEE
Q 028925 111 KLFCMEWKNQRKLTIFDPEDNSWK 134 (202)
Q Consensus 111 ~iyv~Gg~~~~~~~~yd~~~~~W~ 134 (202)
.+++.+ ....+.+||..+..-.
T Consensus 615 ~~l~~~--~~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 615 YWLCAA--TEHGIKIWDLESKSIV 636 (694)
T ss_dssp SEEEEE--ETTEEEEEETTTTEEE
T ss_pred cEEEEE--cCCCEEEEECCCCCCh
Confidence 454444 3456889998877643
No 235
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=90.62 E-value=4.5 Score=30.81 Aligned_cols=143 Identities=10% Similarity=0.051 Sum_probs=81.2
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCC--CCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIES--LRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++||+.--. ...++++++....-+.+.. +..+ ..+++ .+++||+.-.. ...++++++..
T Consensus 84 ~~~ly~~D~~------~~~I~r~~~~g~~~~~~~~~~~~~p---~glavd~~~g~ly~~d~~-------~~~I~~~~~dG 147 (349)
T 3v64_C 84 RELVFWSDVT------LDRILRANLNGSNVEEVVSTGLESP---GGLAVDWVHDKLYWTDSG-------TSRIEVANLDG 147 (349)
T ss_dssp TTEEEEEETT------TTEEEEEETTSCSCEEEECSSCSCC---CEEEEETTTTEEEEEETT-------TTEEEEEETTS
T ss_pred ccEEEEEecc------CCceEEEecCCCCceEEEeCCCCCc---cEEEEecCCCeEEEEcCC-------CCeEEEEcCCC
Confidence 4677776321 2467888887766554421 2222 12222 47889987432 34688888865
Q ss_pred CeEEeccC-ccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE--ECCeEEEEcccC
Q 028925 90 HTWCQMKN-GCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI--LDGKLLLFSLEE 164 (202)
Q Consensus 90 ~~W~~~~~-~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~--~~~~i~v~gG~~ 164 (202)
..-..+.. ......+.++. ++.||+........+++++++...-+.+... ......++++ .+++||+.-.
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---~~~~PnGla~d~~~~~lY~aD~-- 222 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---HLFWPNGLTIDYAGRRMYWVDA-- 222 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCS---SCSCEEEEEEETTTTEEEEEET--
T ss_pred CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---CCCCcceEEEeCCCCEEEEEEC--
Confidence 54333221 11122333343 6899998753448899999876554444211 1122334554 3789999853
Q ss_pred CCCceeEEEeCCCC
Q 028925 165 EPSYSTLLYDPNAA 178 (202)
Q Consensus 165 ~~~~~~~~yd~~~~ 178 (202)
....++++|++..
T Consensus 223 -~~~~I~~~~~dG~ 235 (349)
T 3v64_C 223 -KHHVIERANLDGS 235 (349)
T ss_dssp -TTTEEEEEETTSC
T ss_pred -CCCEEEEEeCCCC
Confidence 2347889988754
No 236
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=90.56 E-value=6.9 Score=32.81 Aligned_cols=167 Identities=10% Similarity=0.070 Sum_probs=85.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCC------CCCCcceEEEEeC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSF------TIGNSKFVDVYNP 87 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~------~~~~~~~~~~yd~ 87 (202)
+++..+++- +..+.....++++|+.+++..... ++..+....+-. +++-++++..... .......+++++.
T Consensus 139 Dg~~lAy~~-~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~l 215 (693)
T 3iuj_A 139 DGRILAYSL-SLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRL 215 (693)
T ss_dssp TSSEEEEEE-ECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEET
T ss_pred CCCEEEEEE-ecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEEC
Confidence 555445431 112233467999999999875541 111111122223 6664444333211 0012346788877
Q ss_pred CCCeEE--ecc--Cc--cceeee-eEEECCEEEEEe---CCCCCeEEEEeCCCC--cEEEeccCCCCCCCCCeeEEEECC
Q 028925 88 ERHTWC--QMK--NG--CVMVTA-HAVVGKKLFCME---WKNQRKLTIFDPEDN--SWKMVPVPLTGSSSIGFRFGILDG 155 (202)
Q Consensus 88 ~~~~W~--~~~--~~--~~~~~~-~~~~~~~iyv~G---g~~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~~ 155 (202)
.+.+=+ .+. +. +....+ ....+++..++. +...+.++++|.++. .|+.+...... . ...+...++
T Consensus 216 gt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~--~-~~~~~~~g~ 292 (693)
T 3iuj_A 216 GTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA--D-VSLVDNKGS 292 (693)
T ss_dssp TSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS--C-EEEEEEETT
T ss_pred CCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc--e-EEEEeccCC
Confidence 665311 111 11 121222 233355533332 223468999998765 68887632211 1 112345688
Q ss_pred eEEEEcccCCCCceeEEEeCCCCCCCcceee
Q 028925 156 KLLLFSLEEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 156 ~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
++|++.....+...++.+|+++.....|+.+
T Consensus 293 ~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l 323 (693)
T 3iuj_A 293 TLYLLTNRDAPNRRLVTVDAANPGPAHWRDL 323 (693)
T ss_dssp EEEEEECTTCTTCEEEEEETTSCCGGGCEEE
T ss_pred EEEEEECCCCCCCEEEEEeCCCCCccccEEE
Confidence 9998875544456899999887422358876
No 237
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=90.56 E-value=3.9 Score=30.36 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=55.7
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEc-CCCCCCceeeeeEEE---CCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLI-ESLRRPRWGCFACSF---DGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~r~~~~~~~~---~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
+.+++.|+.+ ..+.+||+.+.+-... .....+ .....+ ++++++.|+.+ ..+.+||..+.
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~~~~~~~~---i~~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~~ 148 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKHYVGHGNA---INELKFHPRDPNLLLSVSKD-------HALRLWNIQTD 148 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEEEESCCSC---EEEEEECSSCTTEEEEEETT-------SCEEEEETTTT
T ss_pred CCEEEEecCC------CEEEEEEchhceEeeeecCCCCc---EEEEEECCCCCCEEEEEeCC-------CeEEEEEeecC
Confidence 5677777654 3688899887654322 111111 122222 56777776643 46899998877
Q ss_pred eEEecc----CccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCc
Q 028925 91 TWCQMK----NGCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 91 ~W~~~~----~~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
+-...- ........+.. .++..++.++ ..+.+.+||..+.+
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG-MDHSLKLWRINSKR 194 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEESCSHH
T ss_pred eEEEEecccccccCceeEEEECCCCCEEEEec-CCCCEEEEECCCCc
Confidence 644332 11222222222 2455555554 56789999987653
No 238
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=90.11 E-value=4.4 Score=29.80 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=50.4
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEE-cCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe-
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNL-IESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT- 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~- 91 (202)
++++++.|+.+ ..+.+||+.+.+-.. ....... ....+..-++++++.|+.+ ..+.+||..++.
T Consensus 66 ~~~~l~s~s~d------~~i~vwd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~sgs~D-------~~v~lWd~~~~~~ 131 (304)
T 2ynn_A 66 RKNWIIVGSDD------FRIRVFNYNTGEKVVDFEAHPDY-IRSIAVHPTKPYVLSGSDD-------LTVKLWNWENNWA 131 (304)
T ss_dssp GGTEEEEEETT------SEEEEEETTTCCEEEEEECCSSC-EEEEEECSSSSEEEEEETT-------SCEEEEEGGGTTE
T ss_pred CCCEEEEECCC------CEEEEEECCCCcEEEEEeCCCCc-EEEEEEcCCCCEEEEECCC-------CeEEEEECCCCcc
Confidence 44555555543 357888888765322 1111111 1111112255666666543 468888876542
Q ss_pred EE-eccCccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCc
Q 028925 92 WC-QMKNGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 92 W~-~~~~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
-. .+........+.... ++.+++.|+ ..+.+.+||..+..
T Consensus 132 ~~~~~~~h~~~v~~v~~~p~~~~~l~sgs-~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGC-LDRTVKVWSLGQST 174 (304)
T ss_dssp EEEEECCCCSCEEEEEECTTCTTEEEEEE-TTSEEEEEETTCSS
T ss_pred hhhhhcccCCcEEEEEECCCCCCEEEEEe-CCCeEEEEECCCCC
Confidence 11 111111122222222 345666664 67789999986543
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=89.91 E-value=4.6 Score=29.74 Aligned_cols=84 Identities=15% Similarity=0.270 Sum_probs=42.4
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCe-EEeccCccceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCC-cEEEecc
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHT-WCQMKNGCVMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDN-SWKMVPV 138 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~-~W~~~~~ 138 (202)
+|.||+... ...+.+||+.... |+...+.. ........ ++.||+.. ....+.+||++.. .|..-.
T Consensus 225 ~g~l~v~t~--------~~gl~~~~~~g~~~~~~~~~~~-~~~~~~~~~~g~l~v~t--~~ggl~~~d~~g~~~~~~~~- 292 (330)
T 3hxj_A 225 DGTIYVTSL--------DGHLYAINPDGTEKWRFKTGKR-IESSPVIGNTDTIYFGS--YDGHLYAINPDGTEKWNFET- 292 (330)
T ss_dssp TSCEEEEET--------TTEEEEECTTSCEEEEEECSSC-CCSCCEECTTSCEEEEC--TTCEEEEECTTSCEEEEEEC-
T ss_pred CCeEEEEcC--------CCeEEEECCCCCEeEEeeCCCC-ccccceEcCCCeEEEec--CCCCEEEECCCCcEEEEEEc-
Confidence 457777531 1357777765443 44322211 11222333 67888753 3457899997544 354431
Q ss_pred CCCCCCCCCeeEEE-ECCeEEEEc
Q 028925 139 PLTGSSSIGFRFGI-LDGKLLLFS 161 (202)
Q Consensus 139 ~~~~~~~~~~~~~~-~~~~i~v~g 161 (202)
+ . ....+++. .+++||+-.
T Consensus 293 ~--~--~~~~~~~~d~~g~l~~gt 312 (330)
T 3hxj_A 293 G--S--WIIATPVIDENGTIYFGT 312 (330)
T ss_dssp S--S--CCCSCCEECTTCCEEEEC
T ss_pred C--C--ccccceEEcCCCEEEEEc
Confidence 1 1 11223334 578888743
No 240
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=89.90 E-value=5.3 Score=30.42 Aligned_cols=148 Identities=11% Similarity=0.005 Sum_probs=68.4
Q ss_pred eEEEeCCCCCeEEcCCCCCCceeee--eEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-----Cccceeeee
Q 028925 33 AEVYDPDTDKWNLIESLRRPRWGCF--ACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-----NGCVMVTAH 105 (202)
Q Consensus 33 ~~~yd~~t~~W~~~~~~~~~r~~~~--~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-----~~~~~~~~~ 105 (202)
+.+++..+.+-.............. +..-+++.++.++.+.. ....+..+|.......... .......++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~ 275 (365)
T 4h5i_A 199 LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKG---KGIVLTKISIKSGNTSVLRSKQVTNRFKGITSM 275 (365)
T ss_dssp EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSS---CCEEEEEEEEETTEEEEEEEEEEESSCSCEEEE
T ss_pred EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCc---ceeEEeecccccceecceeeeeecCCCCCeEeE
Confidence 4556666555433222221222222 22347887777655432 1234666776665554332 111111222
Q ss_pred -EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCe-eEEE-ECCeEEEEcccCCCCceeEEEeCCCCC---
Q 028925 106 -AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGF-RFGI-LDGKLLLFSLEEEPSYSTLLYDPNAAS--- 179 (202)
Q Consensus 106 -~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~~--- 179 (202)
...++++++.|+ ..+.+.+||..+.+-... ..... .... +++. -+++.++.|+.. ..+.+||+..+-
T Consensus 276 ~~Spdg~~lasgs-~D~~V~iwd~~~~~~~~~--~~~gH-~~~V~~v~fSpdg~~laS~S~D---~tvrvw~ip~~~~~~ 348 (365)
T 4h5i_A 276 DVDMKGELAVLAS-NDNSIALVKLKDLSMSKI--FKQAH-SFAITEVTISPDSTYVASVSAA---NTIHIIKLPLNYANY 348 (365)
T ss_dssp EECTTSCEEEEEE-TTSCEEEEETTTTEEEEE--ETTSS-SSCEEEEEECTTSCEEEEEETT---SEEEEEECCTTTTC-
T ss_pred EECCCCCceEEEc-CCCEEEEEECCCCcEEEE--ecCcc-cCCEEEEEECCCCCEEEEEeCC---CeEEEEEcCCCCcCc
Confidence 233777777775 567899999987653321 11111 1122 2222 378888877542 368888875421
Q ss_pred CCcceeecccC
Q 028925 180 GSEWQTSKIKP 190 (202)
Q Consensus 180 ~~~W~~~~~~p 190 (202)
...|+++-.+-
T Consensus 349 ~s~~~~l~kl~ 359 (365)
T 4h5i_A 349 TSMKQKISKLE 359 (365)
T ss_dssp -----------
T ss_pred cCccccceeee
Confidence 11455554443
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=89.77 E-value=4.7 Score=29.67 Aligned_cols=93 Identities=17% Similarity=0.242 Sum_probs=47.4
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCC-CeEEeccCccceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCc-EEEecc
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPER-HTWCQMKNGCVMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNS-WKMVPV 138 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~-~~W~~~~~~~~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~-W~~~~~ 138 (202)
++.||+.. ..+.+||+.. ..|+...+... ..+.... ++.||+.. ....+.+||+.... |+...
T Consensus 187 ~g~l~v~t----------~~l~~~d~~g~~~~~~~~~~~~-~~~~~~~~~g~l~v~t--~~~gl~~~~~~g~~~~~~~~- 252 (330)
T 3hxj_A 187 DGTIYFGS----------DKVYAINPDGTEKWNFYAGYWT-VTRPAISEDGTIYVTS--LDGHLYAINPDGTEKWRFKT- 252 (330)
T ss_dssp TCCEEEES----------SSEEEECTTSCEEEEECCSSCC-CSCCEECTTSCEEEEE--TTTEEEEECTTSCEEEEEEC-
T ss_pred CCEEEEEe----------CEEEEECCCCcEEEEEccCCcc-eeceEECCCCeEEEEc--CCCeEEEECCCCCEeEEeeC-
Confidence 56677643 2477888432 34654432211 1222233 55888764 45788899876555 44432
Q ss_pred CCCCCCCCCeeEEEE-CCeEEEEcccCCCCceeEEEeCC
Q 028925 139 PLTGSSSIGFRFGIL-DGKLLLFSLEEEPSYSTLLYDPN 176 (202)
Q Consensus 139 ~~~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~~~~yd~~ 176 (202)
.. . .. ...+.. ++.||+... ...++.||+.
T Consensus 253 ~~-~--~~-~~~~~~~~g~l~v~t~----~ggl~~~d~~ 283 (330)
T 3hxj_A 253 GK-R--IE-SSPVIGNTDTIYFGSY----DGHLYAINPD 283 (330)
T ss_dssp SS-C--CC-SCCEECTTSCEEEECT----TCEEEEECTT
T ss_pred CC-C--cc-ccceEcCCCeEEEecC----CCCEEEECCC
Confidence 11 1 11 122233 677877431 1257777763
No 242
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=89.77 E-value=10 Score=33.49 Aligned_cols=141 Identities=11% Similarity=0.004 Sum_probs=73.9
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEE-EEeCCCCeEEeccCccceeee-eEEEC
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVD-VYNPERHTWCQMKNGCVMVTA-HAVVG 109 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~-~yd~~~~~W~~~~~~~~~~~~-~~~~~ 109 (202)
.++++|..+.+-..+...+..+....+.. +|+.+++.+. ...++ +||..+.+-..+......... ....+
T Consensus 318 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-------~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpD 389 (1045)
T 1k32_A 318 QAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-------EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRN 389 (1045)
T ss_dssp EEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-------TEEEEEEEETTTCCEEECCCCCCSEEEEEECTT
T ss_pred EEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-------CCceEEEEECCCCCceEecCCccceeeeEECCC
Confidence 45666666555444432222122222223 6665555432 24688 899888776666522122222 22336
Q ss_pred CEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCC-------CCceeEEEeCCCCCCCc
Q 028925 110 KKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEE-------PSYSTLLYDPNAASGSE 182 (202)
Q Consensus 110 ~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~-------~~~~~~~yd~~~~~~~~ 182 (202)
++.++++. ....++++|.++.+-..+...... ........-+++.+++++... ....+++||.+++ +
T Consensus 390 G~~la~~~-~~~~v~~~d~~tg~~~~~~~~~~~--~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g---~ 463 (1045)
T 1k32_A 390 GKFAVVAN-DRFEIMTVDLETGKPTVIERSREA--MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGR---K 463 (1045)
T ss_dssp SSEEEEEE-TTSEEEEEETTTCCEEEEEECSSS--CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTT---E
T ss_pred CCEEEEEC-CCCeEEEEECCCCceEEeccCCCC--CccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCC---c
Confidence 66555553 457899999998887666411111 111112234666555554322 2247899999876 5
Q ss_pred ceee
Q 028925 183 WQTS 186 (202)
Q Consensus 183 W~~~ 186 (202)
...+
T Consensus 464 ~~~l 467 (1045)
T 1k32_A 464 IFAA 467 (1045)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 4444
No 243
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=89.70 E-value=6 Score=30.81 Aligned_cols=105 Identities=12% Similarity=0.044 Sum_probs=63.1
Q ss_pred ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccC-ccceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEEEec
Q 028925 61 FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKN-GCVMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 61 ~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~ 137 (202)
.+++||+.-.. ...++++|+....-..+.. ......+.++ .++.||+........+++++.+...=+.+.
T Consensus 169 ~~~~lY~~d~~-------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~ 241 (400)
T 3p5b_L 169 IHSNIYWTDSV-------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV 241 (400)
T ss_dssp TTTEEEEEETT-------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE
T ss_pred cCCceEEEECC-------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE
Confidence 47899997432 3478899887665444432 1112223333 268999987434578999998765444442
Q ss_pred cCCCCCCCCCeeEEEE--CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 138 VPLTGSSSIGFRFGIL--DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 138 ~~~~~~~~~~~~~~~~--~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.. ......++++. +++||+.-. ....|+++|.+..
T Consensus 242 ~~---~l~~P~glavd~~~~~lY~aD~---~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 242 TE---NIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGG 278 (400)
T ss_dssp CS---SCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSC
T ss_pred EC---CCCceEEEEEEeCCCEEEEEEC---CCCEEEEEeCCCC
Confidence 11 11223345544 789999853 2457999998764
No 244
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=89.53 E-value=7.4 Score=31.58 Aligned_cols=94 Identities=11% Similarity=-0.048 Sum_probs=52.9
Q ss_pred EEEEeCCCCeEEeccCccceeeeeEEECCEEEEEeC---CCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEE-EECCeE
Q 028925 82 VDVYNPERHTWCQMKNGCVMVTAHAVVGKKLFCMEW---KNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFG-ILDGKL 157 (202)
Q Consensus 82 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~iyv~Gg---~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i 157 (202)
..+||..+.+-..+...+. .......+|+..+++. .....++++|.++.+.+.+... .. . ....+ .-||+.
T Consensus 134 ~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~-~~--~-~~~~~~SpDG~~ 208 (582)
T 3o4h_A 134 VALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSG-EG--S-FSSASISPGMKV 208 (582)
T ss_dssp EEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCS-SC--E-EEEEEECTTSCE
T ss_pred ceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecC-CC--c-cccceECCCCCE
Confidence 4478888887766653222 2223445665555432 1235699999999988877421 11 1 11222 236665
Q ss_pred EEEcccCCCCceeEEEeCCCCCCCcce
Q 028925 158 LLFSLEEEPSYSTLLYDPNAASGSEWQ 184 (202)
Q Consensus 158 ~v~gG~~~~~~~~~~yd~~~~~~~~W~ 184 (202)
++.+ .......+++||.+++ +.+
T Consensus 209 l~~~-~~~~~~~i~~~d~~~~---~~~ 231 (582)
T 3o4h_A 209 TAGL-ETAREARLVTVDPRDG---SVE 231 (582)
T ss_dssp EEEE-ECSSCEEEEEECTTTC---CEE
T ss_pred EEEc-cCCCeeEEEEEcCCCC---cEE
Confidence 5533 2222247999999887 655
No 245
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=89.41 E-value=4.5 Score=28.91 Aligned_cols=134 Identities=21% Similarity=0.262 Sum_probs=71.9
Q ss_pred ECCEEEEEcCcCCCCCceeeeEEEeCCCCCe--EEcC----CCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEe
Q 028925 13 VNGKIYAVGGYGMDGESLSSAEVYDPDTDKW--NLIE----SLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYN 86 (202)
Q Consensus 13 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W--~~~~----~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd 86 (202)
.++++|+|=|. .+|+++...... ..+. .||.. ..+ +...++++|++-| +.+++|+
T Consensus 27 ~~g~~yfFkg~--------~~Wr~~~~~~~~~p~~Is~~wpgLP~~-IDA-A~~~~~~~yfFkG---------~~yw~~~ 87 (219)
T 1hxn_A 27 NHGATYVFSGS--------HYWRLDTNRDGWHSWPIAHQWPQGPST-VDA-AFSWEDKLYLIQD---------TKVYVFL 87 (219)
T ss_dssp TTSCEEEEETT--------EEEESSSSSCTTCCEEGGGTCTTSCSS-CSE-EEEETTEEEEEET---------TEEEEEE
T ss_pred CCCcEEEEeCC--------EEEEEcCCCCCCCceEhhhhccCCCCC-ccE-EEEECCcEEEecC---------CEEEEEe
Confidence 47899999763 478877654332 1222 23322 222 2335899999965 3588888
Q ss_pred CCCCeEEecc--C--------ccce-----eeeeEEE--CCEEEEEeCCCCCeEEEEeCCCC---cEEEeccCCCCCCCC
Q 028925 87 PERHTWCQMK--N--------GCVM-----VTAHAVV--GKKLFCMEWKNQRKLTIFDPEDN---SWKMVPVPLTGSSSI 146 (202)
Q Consensus 87 ~~~~~W~~~~--~--------~~~~-----~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~---~W~~~~~~~~~~~~~ 146 (202)
..++. +..+ | .+.. ..++... ++++|++-| +..+.||..+. .|...+.+ + ...
T Consensus 88 ~~~~~-~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG---~~ywr~d~~~~P~~i~~~~~g~--p-~~v 160 (219)
T 1hxn_A 88 TKGGY-TLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG---RRLWWLDLKSGAQATWTELPWP--H-EKV 160 (219)
T ss_dssp CSSSC-EECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET---TEEEEEEGGGGGGCCCEEECCS--C-SCC
T ss_pred CCCCc-eecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC---CEEEEEeCCCCceEhhhcCCCC--C-CCc
Confidence 65321 1111 1 1111 2333333 579999954 46789986542 34433211 1 122
Q ss_pred CeeEEE-----------ECCeEEEEcccCCCCceeEEEeCCC
Q 028925 147 GFRFGI-----------LDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 147 ~~~~~~-----------~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
-+++.. .++.+|.+-|. .-++||..+
T Consensus 161 dAa~~~~~~~~~~~~~~~~~~~YFFkg~-----~y~r~~~~~ 197 (219)
T 1hxn_A 161 DGALCMEKPLGPNSCSTSGPNLYLIHGP-----NLYCYRHVD 197 (219)
T ss_dssp SEEEEESSCSSSCCSCSSSCEEEEEETT-----EEEEESSHH
T ss_pred CEEEEccccccccceeccCCeEEEEECC-----EEEEEeCCc
Confidence 333332 35679998754 467777654
No 246
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.25 E-value=6.6 Score=30.64 Aligned_cols=144 Identities=11% Similarity=0.053 Sum_probs=78.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCC---CCCCcee-e-eeEEE--CCEEEEEcCccCCCCCCcceEEEEe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIES---LRRPRWG-C-FACSF--DGKLYVMGGRSSFTIGNSKFVDVYN 86 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~---~~~~r~~-~-~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd 86 (202)
++.||+... ...+++||+.+.+-..... ....... . .++.. ++.||+.... ...+++||
T Consensus 230 ~g~lyv~d~-------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-------~~~I~~~~ 295 (409)
T 3hrp_A 230 EEWLYFVDS-------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-------LSSVYKIT 295 (409)
T ss_dssp SSEEEEECT-------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-------TTEEEEEC
T ss_pred CCeEEEEEC-------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-------CCEEEEEe
Confidence 578888422 1368999998887655411 1111122 1 33333 5889987432 34688888
Q ss_pred CCCCeEEecc-Cc--------------cceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccC-CC--------
Q 028925 87 PERHTWCQMK-NG--------------CVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVP-LT-------- 141 (202)
Q Consensus 87 ~~~~~W~~~~-~~--------------~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~-~~-------- 141 (202)
+... ...+. .. -....+.++ .++.||+......+.+.++|+.+..-..+... ..
T Consensus 296 ~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~ 374 (409)
T 3hrp_A 296 PDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTP 374 (409)
T ss_dssp TTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBST
T ss_pred cCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCCh
Confidence 7654 22221 10 011222333 26789999642467899999777776665421 00
Q ss_pred --CCCCCCeeEEEE-CCeEEEEcccCCCCceeEEEeC
Q 028925 142 --GSSSIGFRFGIL-DGKLLLFSLEEEPSYSTLLYDP 175 (202)
Q Consensus 142 --~~~~~~~~~~~~-~~~i~v~gG~~~~~~~~~~yd~ 175 (202)
.......++++. ++.|||.... ...+..+++
T Consensus 375 ~~~~~~~P~giavd~~g~lyVad~~---n~~Ir~i~~ 408 (409)
T 3hrp_A 375 LEATFNYPYDICYDGEGGYWIAEAW---GKAIRKYAV 408 (409)
T ss_dssp TTCCBSSEEEEEECSSSEEEEEEST---TCEEEEEEE
T ss_pred hceEeCCceEEEEcCCCCEEEEECC---CCeEEEEEe
Confidence 111223344443 4889987632 335666654
No 247
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=89.20 E-value=5.4 Score=29.58 Aligned_cols=105 Identities=11% Similarity=0.103 Sum_probs=56.6
Q ss_pred CEEEEEcCccCCCCCCcceEEEEeCCCCeEEec-cCccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccC
Q 028925 63 GKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQM-KNGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVP 139 (202)
Q Consensus 63 ~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~-~~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~ 139 (202)
+.+++.|+.+ ..+.+||..+.+-... ........+.... ++.+++.|+ ..+.+.+||..+.+-...-..
T Consensus 85 ~~~l~~~~~d-------g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~ 156 (366)
T 3k26_A 85 HPLLAVAGSR-------GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVS-KDHALRLWNIQTDTLVAIFGG 156 (366)
T ss_dssp CEEEEEEETT-------CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEE-TTSCEEEEETTTTEEEEEECS
T ss_pred CCEEEEecCC-------CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEe-CCCeEEEEEeecCeEEEEecc
Confidence 5677776643 4688999876643221 1122222222222 556666664 578899999987765443211
Q ss_pred CCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 140 LTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 140 ~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.......-..++. .+++.++.++.. ..+.+||..+.
T Consensus 157 ~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~ 193 (366)
T 3k26_A 157 VEGHRDEVLSADYDLLGEKIMSCGMD---HSLKLWRINSK 193 (366)
T ss_dssp TTSCSSCEEEEEECTTSSEEEEEETT---SCEEEEESCSH
T ss_pred cccccCceeEEEECCCCCEEEEecCC---CCEEEEECCCC
Confidence 1111122222222 256666766542 36888888764
No 248
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=88.49 E-value=7.2 Score=30.14 Aligned_cols=143 Identities=13% Similarity=0.157 Sum_probs=79.2
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcC--CCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIE--SLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++||+.-.. ...++++|+....-+.+. .+..|+ .+++ .++.||+.--. ....++++++..
T Consensus 170 ~g~lY~~d~~------~~~I~~~~~dg~~~~~l~~~~l~~P~---giavdp~~g~ly~td~~------~~~~I~r~~~dG 234 (386)
T 3v65_B 170 HDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWG------NTPRIEASSMDG 234 (386)
T ss_dssp TTEEEEEETT------TTEEEECBTTSCSCEEEECSSCSCEE---EEEEETTTTEEEEEECS------SSCEEEEEETTS
T ss_pred CCeEEEEcCC------CCeEEEEeCCCCceEEeecCCCCCCc---EEEEEcCCCeEEEeccC------CCCEEEEEeCCC
Confidence 5677776322 135777777654333221 222221 2222 36788886321 125689998865
Q ss_pred CeEEecc-CccceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCC
Q 028925 90 HTWCQMK-NGCVMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEP 166 (202)
Q Consensus 90 ~~W~~~~-~~~~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~ 166 (202)
..-..+. .......+.++ .+++||+... ..+.|+.+|.+...-+.+.... .....++++.++.||+... .
T Consensus 235 ~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~-~~~~I~~~d~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~---~ 307 (386)
T 3v65_B 235 SGRRIIADTHLFWPNGLTIDYAGRRMYWVDA-KHHVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDW---H 307 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEEGGGTEEEEEET-TTTEEEEECTTSCSCEEEECSS---CSSEEEEEEETTEEEEEET---T
T ss_pred CCcEEEEECCCCCeeeEEEeCCCCEEEEEEC-CCCEEEEEeCCCCeeEEEEECC---CCCceEEEEECCEEEEeeC---C
Confidence 4333332 21122233333 3789999974 4678999998754433332111 2334567778999999863 2
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
...|.++|..++
T Consensus 308 ~~~V~~~~~~~G 319 (386)
T 3v65_B 308 TKSINSANKFTG 319 (386)
T ss_dssp TTEEEEEETTTC
T ss_pred CCeEEEEECCCC
Confidence 346888885443
No 249
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=88.48 E-value=5 Score=31.22 Aligned_cols=60 Identities=18% Similarity=0.203 Sum_probs=32.4
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCc----EEEeccCCCCCCCCCeeEEEE---CCeEEEEcccCCCCceeEEEeCCC
Q 028925 109 GKKLFCMEWKNQRKLTIFDPEDNS----WKMVPVPLTGSSSIGFRFGIL---DGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~~~----W~~~~~~~~~~~~~~~~~~~~---~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
++.+++.++ ..+.+.+||..+.. -..+. .. ......+.. +..+++.|+.. ..+.+||..+
T Consensus 243 ~~~~l~s~~-~dg~i~i~d~~~~~~~~~~~~~~---~~--~~~v~~i~~~p~~~~~l~tg~~d---g~v~vwd~~~ 309 (430)
T 2xyi_A 243 HESLFGSVA-DDQKLMIWDTRNNNTSKPSHTVD---AH--TAEVNCLSFNPYSEFILATGSAD---KTVALWDLRN 309 (430)
T ss_dssp CTTEEEEEE-TTSEEEEEETTCSCSSSCSEEEE---CC--SSCEEEEEECSSCTTEEEEEETT---SEEEEEETTC
T ss_pred CCCEEEEEe-CCCeEEEEECCCCCCCcceeEee---cC--CCCeEEEEeCCCCCCEEEEEeCC---CeEEEEeCCC
Confidence 455666654 57889999988652 11221 11 112222222 33477777542 2577788765
No 250
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=88.46 E-value=5 Score=32.07 Aligned_cols=103 Identities=12% Similarity=0.031 Sum_probs=57.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC--e-EEcC---CCCC--CceeeeeEE-ECCEEEEEcCccCCCCCCcceEEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK--W-NLIE---SLRR--PRWGCFACS-FDGKLYVMGGRSSFTIGNSKFVDV 84 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W-~~~~---~~~~--~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~~~ 84 (202)
++++|+|=|. .+|+|+..+-. + +.+. -+|. ....++... .++++|++-| +..++
T Consensus 318 ~g~~~fFKg~--------~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG---------~~yw~ 380 (450)
T 1su3_A 318 RDEVRFFKGN--------KYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA---------NKYWR 380 (450)
T ss_dssp GTEEEEEETT--------EEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET---------TEEEE
T ss_pred CCeEEEEeCC--------EEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC---------CEEEE
Confidence 6899999663 47888743210 0 1111 0121 122222222 2689999966 35899
Q ss_pred EeCCCCeEEeccC---------ccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEe
Q 028925 85 YNPERHTWCQMKN---------GCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMV 136 (202)
Q Consensus 85 yd~~~~~W~~~~~---------~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~ 136 (202)
||..+.+-..--| .+....++...++++|++- ....+.||..+.+=...
T Consensus 381 yd~~~~~~~~gYPk~I~~~fpgip~~iDAA~~~~g~~YFFk---g~~ywr~d~~~~~v~~~ 438 (450)
T 1su3_A 381 YDEYKRSMDPGYPKMIAHDFPGIGHKVDAVFMKDGFFYFFH---GTRQYKFDPKTKRILTL 438 (450)
T ss_dssp EETTTTEECSSCSEEHHHHSTTSCSCCSEEEEETTEEEEEE---TTEEEEEETTTTEEEEE
T ss_pred EeCCCccccCCCCcchhhcCCCCCCCccEEEEcCCeEEEEe---CCEEEEEECCcceEecc
Confidence 9876654322101 1222344455689999994 45678999887765543
No 251
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.40 E-value=11 Score=32.34 Aligned_cols=143 Identities=12% Similarity=0.055 Sum_probs=78.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCC----CeEEc-C-CCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTD----KWNLI-E-SLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVY 85 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~----~W~~~-~-~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~y 85 (202)
+++||+.-.. ...++++++... ..+.+ . .+..+. .+++ .+++||+.-. ....|+++
T Consensus 435 ~~~lY~sD~~------~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~---GLAvD~~~~~LY~tD~-------~~~~I~v~ 498 (791)
T 3m0c_C 435 SNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQAPD---GLAVDWIHSNIYWTDS-------VLGTVSVA 498 (791)
T ss_dssp TTEEEEEETT------TTEEEEEEC--------CEEEECSSCSCCC---EEEEETTTTEEEEEET-------TTTEEEEE
T ss_pred CCeeEEeecc------ceeEEEEeccCCCCCcceeEEEecCCCCcc---eeeeeecCCcEEEEec-------CCCeEEEE
Confidence 4677777432 135677776542 22222 2 222221 2222 4679998743 23578999
Q ss_pred eCCCCeEEeccCcc-ceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE--CCeEEEE
Q 028925 86 NPERHTWCQMKNGC-VMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL--DGKLLLF 160 (202)
Q Consensus 86 d~~~~~W~~~~~~~-~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~i~v~ 160 (202)
++....-..+.... ....+.++ .++.||+........|++++++...-+.+... ......++++. +++||+.
T Consensus 499 ~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~---~l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 499 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---SCSCEEEEEEETTTTEEEEE
T ss_pred eCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC---CCCCceEEEEecCCCeEEEE
Confidence 98766544443211 12233333 26899999743457899999887665555321 11223345544 7899998
Q ss_pred cccCCCCceeEEEeCCCC
Q 028925 161 SLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 161 gG~~~~~~~~~~yd~~~~ 178 (202)
-. ....|+++++...
T Consensus 576 D~---~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 576 DS---KLHSISSIDVNGG 590 (791)
T ss_dssp ET---TTTEEEEEETTSC
T ss_pred eC---CCCcEEEEecCCC
Confidence 53 2347899998664
No 252
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=87.96 E-value=6.9 Score=29.25 Aligned_cols=147 Identities=8% Similarity=-0.056 Sum_probs=75.3
Q ss_pred ECCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCC----CceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCC
Q 028925 13 VNGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRR----PRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 13 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~----~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
-++++|+... ..+++||+.+++.+.+...+. .+....+..-+|++|+..... ........++++|
T Consensus 99 ~dg~l~v~~~--------~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~-~~~~~~~~l~~~~-- 167 (326)
T 2ghs_A 99 SDSKQLIASD--------DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGR-KAETGAGSIYHVA-- 167 (326)
T ss_dssp ETTEEEEEET--------TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEET-TCCTTCEEEEEEE--
T ss_pred CCCeEEEEEC--------CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCC-cCCCCceEEEEEe--
Confidence 3678777641 248999999988876643321 122222223477888743211 1111245788898
Q ss_pred CCeEEeccCccceeeeeEE-ECC-EEEEEeCCCCCeEEEEeCC--CC-c------EEEeccCCCCCCCCCeeEEE-ECCe
Q 028925 89 RHTWCQMKNGCVMVTAHAV-VGK-KLFCMEWKNQRKLTIFDPE--DN-S------WKMVPVPLTGSSSIGFRFGI-LDGK 156 (202)
Q Consensus 89 ~~~W~~~~~~~~~~~~~~~-~~~-~iyv~Gg~~~~~~~~yd~~--~~-~------W~~~~~~~~~~~~~~~~~~~-~~~~ 156 (202)
+.+...+........+... .++ .+|+... ..+.+++||.+ +. + +.... ... ....+++. .++.
T Consensus 168 ~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~-~~~~I~~~d~~~~~Gl~~~~~~~~~~~~--~~~--~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 168 KGKVTKLFADISIPNSICFSPDGTTGYFVDT-KVNRLMRVPLDARTGLPTGKAEVFIDST--GIK--GGMDGSVCDAEGH 242 (326)
T ss_dssp TTEEEEEEEEESSEEEEEECTTSCEEEEEET-TTCEEEEEEBCTTTCCBSSCCEEEEECT--TSS--SEEEEEEECTTSC
T ss_pred CCcEEEeeCCCcccCCeEEcCCCCEEEEEEC-CCCEEEEEEcccccCCcccCceEEEECC--CCC--CCCCeeEECCCCC
Confidence 4665554321111122222 244 5887753 45789999975 43 2 22211 000 11122333 2577
Q ss_pred EEEEcccCCCCceeEEEeCCCC
Q 028925 157 LLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 157 i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
||+.... ...+.+||++..
T Consensus 243 lwva~~~---~~~v~~~d~~g~ 261 (326)
T 2ghs_A 243 IWNARWG---EGAVDRYDTDGN 261 (326)
T ss_dssp EEEEEET---TTEEEEECTTCC
T ss_pred EEEEEeC---CCEEEEECCCCC
Confidence 8875421 236888998543
No 253
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=87.96 E-value=5.7 Score=33.24 Aligned_cols=143 Identities=13% Similarity=0.071 Sum_probs=71.1
Q ss_pred EEEECCEEEEEcCcCCCCCceeeeEEEeCCCC-CeE--Ec----CCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcce
Q 028925 10 CAEVNGKIYAVGGYGMDGESLSSAEVYDPDTD-KWN--LI----ESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKF 81 (202)
Q Consensus 10 ~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~--~~----~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~ 81 (202)
+..+++++|+|-|. .+|+++.... ... .+ +.+|.. ..++... .++++|++-| +.
T Consensus 449 it~~rg~~yfFKg~--------~yWr~~~~~~~~~~P~~Is~~wp~LP~~-IDAA~~~~~~~k~yFFkG---------~~ 510 (631)
T 1ck7_A 449 IAQIRGEIFFFKDR--------FIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG---------NE 510 (631)
T ss_dssp EEECSSSEEEECSS--------EEEEESCTTSCCEEEEEGGGTCTTSCSS-CSBCCEETTTTEEEEEET---------TE
T ss_pred eEecCCcEEEEcCC--------EEEEEcCCCCCCCCceeccccCCCCCcc-ceEEEEECCCCEEEEEec---------CE
Confidence 34568899999663 4788876542 121 11 122322 2222222 3688999965 24
Q ss_pred EEEEeCCCC--eEE-ecc----Cc-cceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEE-----EeccCCCCCCCC
Q 028925 82 VDVYNPERH--TWC-QMK----NG-CVMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWK-----MVPVPLTGSSSI 146 (202)
Q Consensus 82 ~~~yd~~~~--~W~-~~~----~~-~~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~-----~~~~~~~~~~~~ 146 (202)
.++|+..+- -+- .+. |. .....++.. .++++|++- .+..++||..+++=. .+....+.....
T Consensus 511 yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFk---G~~ywryd~~~~~vd~gYPk~i~~~w~G~p~~ 587 (631)
T 1ck7_A 511 YWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFA---GDKFWRYNEVKKKMDPGFPKLIADAWNAIPDN 587 (631)
T ss_dssp EEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEE---TTEEEEEETTTTEECTTCCEETTTSCSSCCTT
T ss_pred EEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEE---CCEEEEEcCCcccccCCCCcchHhhcCCCCCC
Confidence 788875210 000 010 10 011122332 368999995 457899997665311 111111111111
Q ss_pred CeeEEEE--CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 147 GFRFGIL--DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 147 ~~~~~~~--~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
-.++... ++++|++-|. ..|+||..+.
T Consensus 588 iDAAf~~~~~g~~YFFkG~-----~Ywr~d~~~~ 616 (631)
T 1ck7_A 588 LDAVVDLQGGGHSYFFKGA-----YYLKLENQSL 616 (631)
T ss_dssp CCEEECCTTSCBCEEEETT-----EEECCBTTBT
T ss_pred CcEeEEEcCCCeEEEEECC-----EEEEEeCccc
Confidence 1222333 3899998754 4677887654
No 254
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=87.94 E-value=7 Score=29.35 Aligned_cols=148 Identities=9% Similarity=0.078 Sum_probs=79.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCC-CCCc-eeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESL-RRPR-WGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~r-~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
.+.+|++|-. ..+++-+-.-++|+.+... +.+. ....+...++.+|++|- ...+++-+-.-.+
T Consensus 46 ~~~~~~~G~~-------g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~--------~g~i~~S~DgG~t 110 (327)
T 2xbg_A 46 RHHGWLVGVN-------ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGE--------PPIMLHTTDGGQS 110 (327)
T ss_dssp SSCEEEEETT-------TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEE--------TTEEEEESSTTSS
T ss_pred CCcEEEEcCC-------CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEEC--------CCeEEEECCCCCC
Confidence 5678887632 1255554445689998542 1222 22233334678888752 1235544334578
Q ss_pred EEeccCc---cceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccCCC
Q 028925 92 WCQMKNG---CVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEEEP 166 (202)
Q Consensus 92 W~~~~~~---~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~~~ 166 (202)
|+.+... +...... ..-++.+|+.+. ...+++-+-...+|+.+..+... ....++.. ++++++++..
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~g~v~~S~DgG~tW~~~~~~~~~---~~~~~~~~~~~~~~~~g~~--- 182 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMITN--VGAIYRTKDSGKNWQALVQEAIG---VMRNLNRSPSGEYVAVSSR--- 182 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEET--TCCEEEESSTTSSEEEEECSCCC---CEEEEEECTTSCEEEEETT---
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEeC--CccEEEEcCCCCCCEEeecCCCc---ceEEEEEcCCCcEEEEECC---
Confidence 9998621 1122222 234678888873 44566555557789999743222 22333333 5677766521
Q ss_pred CceeEEE-eCCCCCCCcceeecc
Q 028925 167 SYSTLLY-DPNAASGSEWQTSKI 188 (202)
Q Consensus 167 ~~~~~~y-d~~~~~~~~W~~~~~ 188 (202)
+ .++.- |.... +|+.+..
T Consensus 183 G-~~~~S~d~gG~---tW~~~~~ 201 (327)
T 2xbg_A 183 G-SFYSTWEPGQT---AWEPHNR 201 (327)
T ss_dssp S-SEEEEECTTCS---SCEEEEC
T ss_pred C-cEEEEeCCCCC---ceeECCC
Confidence 2 34443 33244 7988743
No 255
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=87.82 E-value=7.7 Score=29.66 Aligned_cols=136 Identities=13% Similarity=0.043 Sum_probs=67.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC---eEEcCCCCCCceeeeeEE-E-CCEEEEEcCccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK---WNLIESLRRPRWGCFACS-F-DGKLYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~r~~~~~~~-~-~~~iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
+|.+||.+.... ..++++|+..+. |....+....+.+....+ . +++++++-... ..+..||..
T Consensus 147 ~GnaYVt~s~~~-----~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~-------g~L~~fD~~ 214 (334)
T 2p9w_A 147 DGNSYVAFALGM-----PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGP-------RALTAFDVS 214 (334)
T ss_dssp TSCEEEEEEESS-----CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSS-------SSEEEEECS
T ss_pred CCCEEEeCCCCC-----CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCC-------CeEEEEcCC
Confidence 679999764321 458999987553 443333233344444443 3 46544443212 358888876
Q ss_pred CCeEEeccCc------c-ceeee--eEEECCEEEEEeCCCCCeEEEEeCCCCcEEEec----cCCCCCCCCCeeEEE---
Q 028925 89 RHTWCQMKNG------C-VMVTA--HAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVP----VPLTGSSSIGFRFGI--- 152 (202)
Q Consensus 89 ~~~W~~~~~~------~-~~~~~--~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~----~~~~~~~~~~~~~~~--- 152 (202)
+-....++.. . ..... ..-.+++++++.-.. ..++.+-...+ |+... .+...........++
T Consensus 215 ~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~-~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~t~~~~ 292 (334)
T 2p9w_A 215 KPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA-PYAISFRSWDN-WKSANIKKTKRSELQNSGFTAVADYYQ 292 (334)
T ss_dssp SSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET-TEEEEEECSST-TSEEEEEEEECGGGGSSCEEEEEEEEE
T ss_pred CCcceeecccccCCcccccCcccccccccCCEEEEEEcCC-CCEEEEECCCC-cceeEEeeeecCccccCceeEEEEecc
Confidence 4322012110 0 11122 233688885554322 33444444444 98865 122111233333333
Q ss_pred -ECCeEEEEccc
Q 028925 153 -LDGKLLLFSLE 163 (202)
Q Consensus 153 -~~~~i~v~gG~ 163 (202)
.+++||++.+.
T Consensus 293 ~~~~~iYvv~~~ 304 (334)
T 2p9w_A 293 GSEQGLYAVSAF 304 (334)
T ss_dssp TTEEEEEEEECC
T ss_pred ccCCeEEEEeee
Confidence 67999998753
No 256
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=87.79 E-value=7 Score=29.18 Aligned_cols=143 Identities=12% Similarity=0.053 Sum_probs=79.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCC----CCeEEc-C-CCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDT----DKWNLI-E-SLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVY 85 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t----~~W~~~-~-~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~y 85 (202)
+++||+.--. ...++++|+.+ ..-+.+ + .+..+ ..+++ .+++||+.-.. ...+.++
T Consensus 41 ~~~ly~~D~~------~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~glavd~~~~~ly~~d~~-------~~~I~~~ 104 (316)
T 1ijq_A 41 SNRIYWSDLS------QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDSV-------LGTVSVA 104 (316)
T ss_dssp TTEEEEEETT------TTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEETT-------TTEEEEE
T ss_pred CCEEEEEECC------CCcEEEEECCCCCCCcccEEEEeCCCCCc---CEEEEeecCCeEEEEECC-------CCEEEEE
Confidence 5689988532 24688888876 222222 1 22222 12232 47899987432 3468889
Q ss_pred eCCCCeEEeccC-ccceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE--CCeEEEE
Q 028925 86 NPERHTWCQMKN-GCVMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL--DGKLLLF 160 (202)
Q Consensus 86 d~~~~~W~~~~~-~~~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~i~v~ 160 (202)
|+....-..+.. ......+.++ .++.||+........+++++++...-+.+... ......+++.. +++||+.
T Consensus 105 ~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~---~~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 105 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---SCSCEEEEEEETTTTEEEEE
T ss_pred eCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC---CCCCceEEEEeccCCEEEEE
Confidence 887654333321 1112233333 37899998743347899999876554444311 11223345544 6899997
Q ss_pred cccCCCCceeEEEeCCCC
Q 028925 161 SLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 161 gG~~~~~~~~~~yd~~~~ 178 (202)
.. ....++++|.+..
T Consensus 182 D~---~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 182 DS---KLHSISSIDVNGG 196 (316)
T ss_dssp ET---TTTEEEEEETTSC
T ss_pred EC---CCCeEEEEecCCC
Confidence 63 2347899998754
No 257
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=87.78 E-value=8.1 Score=29.89 Aligned_cols=102 Identities=8% Similarity=-0.060 Sum_probs=59.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC--e-EEcCC--CCCC--ceeeeeEE-ECCEEEEEcCccCCCCCCcceEEEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK--W-NLIES--LRRP--RWGCFACS-FDGKLYVMGGRSSFTIGNSKFVDVY 85 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W-~~~~~--~~~~--r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~~~y 85 (202)
++++|+|-|. ..|+|+..+.. + +.+.. +|.. .-.++... .++++|++-| +..++|
T Consensus 236 ~g~~~fFkg~--------~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG---------~~yw~y 298 (365)
T 3ba0_A 236 RNQVFLFKDD--------KYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD---------NQYWRY 298 (365)
T ss_dssp GTEEEEEETT--------EEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET---------TEEEEE
T ss_pred CCEEEEEeCC--------EEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC---------CEEEEE
Confidence 7899999663 47888754221 1 12332 2321 22222222 2689999965 358899
Q ss_pred eCCCCeEEeccC---------ccceeeeeEEE-CCEEEEEeCCCCCeEEEEeCCCCcEEE
Q 028925 86 NPERHTWCQMKN---------GCVMVTAHAVV-GKKLFCMEWKNQRKLTIFDPEDNSWKM 135 (202)
Q Consensus 86 d~~~~~W~~~~~---------~~~~~~~~~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~ 135 (202)
|..+++-..--| .+....++... ++++|++- ....+.||..+.+-..
T Consensus 299 d~~~~~v~~gyPk~I~~~f~g~p~~iDaA~~~~~g~~YfFk---g~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 299 DERRQMMDPGYPKLITKNFQGIGPKIDAVFYSKNKYYYFFQ---GSNQFEYDFLLQRITK 355 (365)
T ss_dssp ETTTTEECSSCCCCHHHHSTTCCSSCSEEEEETTTEEEEEE---TTEEEEEETTTTEEEE
T ss_pred eCCcceecCCCCcchhhcCCCCCCccceeeEecCCcEEEEe---CCEEEEEECCccEEec
Confidence 987665332101 11222344445 88999994 4678999998877655
No 258
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=87.70 E-value=7 Score=30.38 Aligned_cols=101 Identities=7% Similarity=0.050 Sum_probs=48.9
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCe----EEeccCccceeeeeEE-ECC-EEEEEeCCCCCeEEEEeCCCCc--E
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHT----WCQMKNGCVMVTAHAV-VGK-KLFCMEWKNQRKLTIFDPEDNS--W 133 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~----W~~~~~~~~~~~~~~~-~~~-~iyv~Gg~~~~~~~~yd~~~~~--W 133 (202)
++.+++.++. ...+.+||..+.. -..+........+... .++ .+++.|+ ..+.+.+||..+.. -
T Consensus 243 ~~~~l~s~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~-~dg~v~vwd~~~~~~~~ 314 (430)
T 2xyi_A 243 HESLFGSVAD-------DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGS-ADKTVALWDLRNLKLKL 314 (430)
T ss_dssp CTTEEEEEET-------TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEE-TTSEEEEEETTCTTSCS
T ss_pred CCCEEEEEeC-------CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEe-CCCeEEEEeCCCCCCCe
Confidence 4566666653 2468899987652 1111111111122222 233 3677765 57789999987632 2
Q ss_pred EEeccCCCCCCCCCeeEEEE--CCeEEEEcccCCCCceeEEEeCCC
Q 028925 134 KMVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
..+.. . ...-.++... +..+++.++.. ..+.+||...
T Consensus 315 ~~~~~---h-~~~v~~i~~sp~~~~~l~s~~~d---~~i~iwd~~~ 353 (430)
T 2xyi_A 315 HSFES---H-KDEIFQVQWSPHNETILASSGTD---RRLHVWDLSK 353 (430)
T ss_dssp EEEEC---C-SSCEEEEEECSSCTTEEEEEETT---SCCEEEEGGG
T ss_pred EEeec---C-CCCEEEEEECCCCCCEEEEEeCC---CcEEEEeCCC
Confidence 22211 1 1111222222 33567776543 2467777654
No 259
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.29 E-value=7.1 Score=28.71 Aligned_cols=102 Identities=11% Similarity=0.118 Sum_probs=55.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC----eEEcCCCCCCceeeeeEEECCE-EEEEcCccCCCCCCcceEEEEeC-
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK----WNLIESLRRPRWGCFACSFDGK-LYVMGGRSSFTIGNSKFVDVYNP- 87 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~----W~~~~~~~~~r~~~~~~~~~~~-iy~~gG~~~~~~~~~~~~~~yd~- 87 (202)
++++++.|+.+ ..+.+||..+.+ -........+ ....+..-+++ +++.|+.+ ..+.+||.
T Consensus 22 ~~~~l~~~~~d------~~v~iw~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~l~~~~~d-------g~i~~wd~~ 87 (342)
T 1yfq_A 22 SKSLLLITSWD------GSLTVYKFDIQAKNVDLLQSLRYKHP-LLCCNFIDNTDLQIYVGTVQ-------GEILKVDLI 87 (342)
T ss_dssp GGTEEEEEETT------SEEEEEEEETTTTEEEEEEEEECSSC-EEEEEEEESSSEEEEEEETT-------SCEEEECSS
T ss_pred CCCEEEEEcCC------CeEEEEEeCCCCccccceeeeecCCc-eEEEEECCCCCcEEEEEcCC-------CeEEEEEec
Confidence 45566666543 357777777665 3222211111 11122233677 66666533 46899998
Q ss_pred CCCeEEeccC--ccceeeeeEEECCEEEEEeCCCCCeEEEEeCCC
Q 028925 88 ERHTWCQMKN--GCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPED 130 (202)
Q Consensus 88 ~~~~W~~~~~--~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~ 130 (202)
.+.+-..+.. ............+.+++.++ ..+.+.+||..+
T Consensus 88 ~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~-~d~~i~iwd~~~ 131 (342)
T 1yfq_A 88 GSPSFQALTNNEANLGICRICKYGDDKLIAAS-WDGLIEVIDPRN 131 (342)
T ss_dssp SSSSEEECBSCCCCSCEEEEEEETTTEEEEEE-TTSEEEEECHHH
T ss_pred cCCceEeccccCCCCceEEEEeCCCCEEEEEc-CCCeEEEEcccc
Confidence 8877666554 33333333333244444544 567888988764
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=87.16 E-value=7.4 Score=28.74 Aligned_cols=146 Identities=11% Similarity=0.082 Sum_probs=77.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE-ECCEEEEEcCccCCCCCCcceEEEEeCCCCeE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS-FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTW 92 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W 92 (202)
+++||+.--. ...+++||+..+ .......+ . .-+.++. -+|+||+..... ....+..+|+.+.+.
T Consensus 42 ~g~lyv~d~~------~~~I~~~d~~g~-~~~~~~~~-~-~p~gia~~~dG~l~vad~~~-----~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 42 DGTIFVTNHE------VGEIVSITPDGN-QQIHATVE-G-KVSGLAFTSNGDLVATGWNA-----DSIPVVSLVKSDGTV 107 (306)
T ss_dssp TSCEEEEETT------TTEEEEECTTCC-EEEEEECS-S-EEEEEEECTTSCEEEEEECT-----TSCEEEEEECTTSCE
T ss_pred CCCEEEEeCC------CCeEEEECCCCc-eEEEEeCC-C-CceeEEEcCCCcEEEEeccC-----CcceEEEEcCCCCeE
Confidence 6789888421 135899998764 33222222 1 1222222 367898874221 112588889888877
Q ss_pred Eecc--CccceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCCc---EEEecc----CCCCCCCCCeeEEEECCeEEEEcc
Q 028925 93 CQMK--NGCVMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDNS---WKMVPV----PLTGSSSIGFRFGILDGKLLLFSL 162 (202)
Q Consensus 93 ~~~~--~~~~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~---W~~~~~----~~~~~~~~~~~~~~~~~~i~v~gG 162 (202)
+.+. +..+...+.+ ..++.+|+... ....++++|+.+.+ |..-.. ..........++...++.||+..
T Consensus 108 ~~~~~~~~~~~~~g~~~~~~~~~~v~d~-~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d- 185 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPLSDTQYLTADS-YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSN- 185 (306)
T ss_dssp EEEEECTTCSCEEEEEESSSSEEEEEET-TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEE-
T ss_pred EEEEeCCCccccCcccccCCCcEEEEEC-CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEe-
Confidence 6654 2222222222 33567888752 35789999987653 211110 01111122233433456788875
Q ss_pred cCCCCceeEEEeCCC
Q 028925 163 EEEPSYSTLLYDPNA 177 (202)
Q Consensus 163 ~~~~~~~~~~yd~~~ 177 (202)
.....+++||++.
T Consensus 186 --~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 186 --TEKMLLLRIPVDS 198 (306)
T ss_dssp --TTTTEEEEEEBCT
T ss_pred --CCCCEEEEEEeCC
Confidence 2244788898864
No 261
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=86.92 E-value=11 Score=30.31 Aligned_cols=101 Identities=11% Similarity=0.132 Sum_probs=53.4
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCC
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPL 140 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~ 140 (202)
++++++.++.+ ..+.+||.....-..+........++ ...++++++.++ ....+.+||.....-+.+..
T Consensus 437 d~~~l~~~~~d-------~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~-~d~~i~iw~~~~~~~~~~~~-- 506 (577)
T 2ymu_A 437 DDQTIASASDD-------KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQTLTG-- 506 (577)
T ss_dssp TSSEEEEEETT-------SEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEE-TTSEEEEEETTSCEEEEEEC--
T ss_pred CCCEEEEEcCC-------CEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEe-CCCEEEEEcCCCCEEEEEeC--
Confidence 56666665532 46888887655444444322222222 233667766664 56788999976544444331
Q ss_pred CCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCC
Q 028925 141 TGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 141 ~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
. ...-.+++. .++++++.++.. ..+.+||...
T Consensus 507 -h-~~~v~~l~~s~dg~~l~s~~~d---g~v~lwd~~~ 539 (577)
T 2ymu_A 507 -H-SSSVRGVAFSPDGQTIASASDD---KTVKLWNRNG 539 (577)
T ss_dssp -C-SSCEEEEEECTTSSCEEEEETT---SEEEEECTTS
T ss_pred -C-CCCEEEEEEcCCCCEEEEEECc---CEEEEEeCCC
Confidence 1 111112222 366766666542 2577777644
No 262
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=86.05 E-value=9.6 Score=28.99 Aligned_cols=137 Identities=11% Similarity=0.090 Sum_probs=68.8
Q ss_pred eeeEEEeCCCCCeEEcC--CCCCCcee-eeeEE---ECCEEEEEcCccCCCCCCcceEEEEeCCCC--eEEeccCcccee
Q 028925 31 SSAEVYDPDTDKWNLIE--SLRRPRWG-CFACS---FDGKLYVMGGRSSFTIGNSKFVDVYNPERH--TWCQMKNGCVMV 102 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~--~~~~~r~~-~~~~~---~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~~~~~ 102 (202)
..+.+||+.+.+-...- ..+..... ..... .++.+++.|+.+ ..+.+||.... .-..+.......
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-------~~v~~wd~~~~~~~~~~~~~h~~~v 252 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-------TTVRLWDLRITSRAVRTYHGHEGDI 252 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-------SCEEEEETTTTCCCCEEECCCSSCC
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-------CeEEEEECCCCCcceEEECCcCCCe
Confidence 35788899887654321 11221111 11122 266777777643 46888887532 111221111111
Q ss_pred eeeE-EECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCC---CCCC-CeeEE-EECCeEEEEcccCCCCceeEEEeCC
Q 028925 103 TAHA-VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTG---SSSI-GFRFG-ILDGKLLLFSLEEEPSYSTLLYDPN 176 (202)
Q Consensus 103 ~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~---~~~~-~~~~~-~~~~~i~v~gG~~~~~~~~~~yd~~ 176 (202)
.+.. ..++..++.|+ ..+.+.+||..+..-...-..... .... -.+++ ..++++++.|+. ...+.+||..
T Consensus 253 ~~v~~~p~~~~l~s~s-~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~---dg~i~vwd~~ 328 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGS-DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYS---NGDCYVWDTL 328 (380)
T ss_dssp CEEEECTTSSEEEEEC-SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECT---TSCEEEEETT
T ss_pred EEEEEecCCCeEEEEc-CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEEC---CCCEEEEECC
Confidence 2222 23566666665 678899999987764433211111 0011 11222 236777777643 2368888886
Q ss_pred CC
Q 028925 177 AA 178 (202)
Q Consensus 177 ~~ 178 (202)
+.
T Consensus 329 ~~ 330 (380)
T 3iz6_a 329 LA 330 (380)
T ss_dssp TC
T ss_pred CC
Confidence 65
No 263
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=84.71 E-value=11 Score=28.56 Aligned_cols=136 Identities=12% Similarity=0.055 Sum_probs=68.0
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc---Ccccee-eeeE
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK---NGCVMV-TAHA 106 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~---~~~~~~-~~~~ 106 (202)
..+.+||+.+.+-.......... ...+..-+|++++.++. ..+.+++..+.+-.... ...... ....
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~V-~~v~fspdg~~l~s~s~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~f 227 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGEV-KDLHFSTDGKVVAYITG--------SSLEVISTVTGSCIARKTDFDKNWSLSKINF 227 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSCC-CEEEECTTSSEEEEECS--------SCEEEEETTTCCEEEEECCCCTTEEEEEEEE
T ss_pred CEEEEeECCCCcEEEEeCCCCce-EEEEEccCCceEEeccc--------eeEEEEEeccCcceeeeecCCCCCCEEEEEE
Confidence 35788899887654332222221 11112236777766542 24666776666543322 111111 2234
Q ss_pred EECCEEEEEeCCC---CCeEEEEeCCCCcEEEecc-CCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 107 VVGKKLFCMEWKN---QRKLTIFDPEDNSWKMVPV-PLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 107 ~~~~~iyv~Gg~~---~~~~~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
..++..++.++.. ...+..+|........... ........-.+++. .++++++.|+.. ..+.+||.++.
T Consensus 228 spdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D---~~V~iwd~~~~ 301 (365)
T 4h5i_A 228 IADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND---NSIALVKLKDL 301 (365)
T ss_dssp EETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT---SCEEEEETTTT
T ss_pred cCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC---CEEEEEECCCC
Confidence 4577777766422 2256677776665544321 11111111122222 378888887653 26888998775
No 264
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=84.12 E-value=3.3 Score=32.38 Aligned_cols=72 Identities=17% Similarity=0.080 Sum_probs=42.9
Q ss_pred CCEEEEEcC---cCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCE--EEEEcCccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGG---YGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGK--LYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG---~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~--iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
++++||.-+ ......+-++++++|++|++-..--++.. +....+...+++ ||+..+. ..++.+||..
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn~~-------~~~VsViD~~ 362 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALSTG-------DKTLYIHDAE 362 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEETT-------TTEEEEEETT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEcCC-------CCeEEEEECC
Confidence 679999742 22223346789999999887643322221 222233345664 6665432 3579999999
Q ss_pred CCeEE
Q 028925 89 RHTWC 93 (202)
Q Consensus 89 ~~~W~ 93 (202)
+.+-.
T Consensus 363 t~k~~ 367 (386)
T 3sjl_D 363 SGEEL 367 (386)
T ss_dssp TCCEE
T ss_pred CCcEE
Confidence 88743
No 265
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=83.88 E-value=10 Score=27.35 Aligned_cols=101 Identities=10% Similarity=0.081 Sum_probs=50.2
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCC
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPL 140 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~ 140 (202)
++..++.++.+ ..+.+||.....-............. ...++. ++.|+ ..+.+.+||..+.+-...-..
T Consensus 154 ~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~-~dg~i~i~d~~~~~~~~~~~~- 223 (313)
T 3odt_A 154 SENKFLTASAD-------KTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCS-NDGLIKLVDMHTGDVLRTYEG- 223 (313)
T ss_dssp TTTEEEEEETT-------SCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEE-TTSEEEEEETTTCCEEEEEEC-
T ss_pred CCCEEEEEECC-------CCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEcc-CCCeEEEEECCchhhhhhhhc-
Confidence 56666666543 35888884322211111122222222 344667 44443 678899999987653332111
Q ss_pred CCCCCCCeeEEEE-CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 141 TGSSSIGFRFGIL-DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 141 ~~~~~~~~~~~~~-~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
. ...-.+++.. +++ ++.++. ...+.+||..+.
T Consensus 224 -~-~~~i~~~~~~~~~~-l~~~~~---dg~v~iwd~~~~ 256 (313)
T 3odt_A 224 -H-ESFVYCIKLLPNGD-IVSCGE---DRTVRIWSKENG 256 (313)
T ss_dssp -C-SSCEEEEEECTTSC-EEEEET---TSEEEEECTTTC
T ss_pred -C-CceEEEEEEecCCC-EEEEec---CCEEEEEECCCC
Confidence 1 1112223333 444 444433 236888888776
No 266
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=83.09 E-value=18 Score=29.64 Aligned_cols=145 Identities=15% Similarity=0.129 Sum_probs=74.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcC-C--CCC-Cce-eeeeEEE--CCEEEEEcCccCCCCCCcceEEEEe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIE-S--LRR-PRW-GCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYN 86 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~-~--~~~-~r~-~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd 86 (202)
++++++.|+.+ ..+.+||..+.+-...- . +.. ... ....+.+ +++.++.|+.+ ..+.+||
T Consensus 201 dg~~las~s~D------~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-------~~v~lWd 267 (611)
T 1nr0_A 201 DGSLFASTGGD------GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-------KTIKIWN 267 (611)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-------SEEEEEE
T ss_pred CCCEEEEEECC------CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC-------CeEEEEe
Confidence 45566666543 35778888776653321 1 000 111 1112222 67776666543 4688999
Q ss_pred CCCCeEEeccCc---cceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcc
Q 028925 87 PERHTWCQMKNG---CVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSL 162 (202)
Q Consensus 87 ~~~~~W~~~~~~---~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG 162 (202)
..+.+....-+. ..........++..++.++ ..+.+..+|+.+..-...- ......-.+++. .+++.++.++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s-~d~~i~~~~~~~~~~~~~~---~gh~~~v~~l~~spdg~~l~s~s 343 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSIS-ANGFINFVNPELGSIDQVR---YGHNKAITALSSSADGKTLFSAD 343 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEE-TTCCEEEEETTTTEEEEEE---CCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEe-CCCcEEEEeCCCCCcceEE---cCCCCCEEEEEEeCCCCEEEEEe
Confidence 988765442211 1111112333555555543 5677888998876533221 111111122222 2677777765
Q ss_pred cCCCCceeEEEeCCCC
Q 028925 163 EEEPSYSTLLYDPNAA 178 (202)
Q Consensus 163 ~~~~~~~~~~yd~~~~ 178 (202)
.. ..+.+||..++
T Consensus 344 ~D---~~v~~Wd~~~~ 356 (611)
T 1nr0_A 344 AE---GHINSWDISTG 356 (611)
T ss_dssp TT---SCEEEEETTTC
T ss_pred CC---CcEEEEECCCC
Confidence 43 26888898775
No 267
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=82.76 E-value=13 Score=27.74 Aligned_cols=52 Identities=13% Similarity=0.100 Sum_probs=26.2
Q ss_pred eeeEEEeCCCCCeEE-cCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 31 SSAEVYDPDTDKWNL-IESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
..+.+||+.+.+... ......+ ....+..-+++.++.|+.+ ..+.+||....
T Consensus 98 ~~v~lwd~~~~~~~~~~~~h~~~-v~~v~~sp~~~~l~s~~~d-------~~i~~wd~~~~ 150 (343)
T 2xzm_R 98 KTLRLWDLRTGTTYKRFVGHQSE-VYSVAFSPDNRQILSAGAE-------REIKLWNILGE 150 (343)
T ss_dssp SEEEEEETTSSCEEEEEECCCSC-EEEEEECSSTTEEEEEETT-------SCEEEEESSSC
T ss_pred CcEEEEECCCCcEEEEEcCCCCc-EEEEEECCCCCEEEEEcCC-------CEEEEEeccCC
Confidence 357788888765432 2111111 1111112256666666543 45888887644
No 268
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=82.71 E-value=27 Score=31.51 Aligned_cols=136 Identities=13% Similarity=0.074 Sum_probs=73.6
Q ss_pred eeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccC--ccc-eeeeeE
Q 028925 30 LSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKN--GCV-MVTAHA 106 (202)
Q Consensus 30 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~--~~~-~~~~~~ 106 (202)
...+++|+...++.+.+..-+..-.-.+.+.++|+|.+.=| +.+.+|+...++--++.. .+. ......
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig---------~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~ 933 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN---------STVRLYEWTTEKELRTECNHYNNIMALYLK 933 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET---------TEEEEEEECTTSCEEEEEEECCCSCEEEEE
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC---------CEEEEEECCCCceEEEEeeccccEEEEEEe
Confidence 45788888765555554322221122345568887666433 357788776554222110 000 011223
Q ss_pred EECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCC
Q 028925 107 VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 107 ~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
..++.|++..-..+-.+..|+...++-..++....+ +...++..+++. .++++....+-.++.|+++.
T Consensus 934 ~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~--~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~~~ 1001 (1158)
T 3ei3_A 934 TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNP--NWMSAVEILDDD-NFLGAENAFNLFVCQKDSAA 1001 (1158)
T ss_dssp EETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSC--BCEEEEEEEETT-EEEEEETTSEEEEEEECTTC
T ss_pred ccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeeccc--ccEEEEEEEccC-cEEEEcCCCcEEEEecCCCC
Confidence 457777665422223455689999999998854444 555666665443 34445544444667777753
No 269
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=82.69 E-value=16 Score=28.97 Aligned_cols=110 Identities=14% Similarity=0.076 Sum_probs=59.9
Q ss_pred cceEEEEECCEEEEEcCcCC--CCCceeeeEE---EeCCCCCeEEcCCCCCCc--eeeeeEEECCEEEEEcCc-cCCCCC
Q 028925 6 YDFACAEVNGKIYAVGGYGM--DGESLSSAEV---YDPDTDKWNLIESLRRPR--WGCFACSFDGKLYVMGGR-SSFTIG 77 (202)
Q Consensus 6 ~~~~~~~~~~~iyv~GG~~~--~~~~~~~~~~---yd~~t~~W~~~~~~~~~r--~~~~~~~~~~~iy~~gG~-~~~~~~ 77 (202)
.-|+.+.+++.=|++|=.+. ....+.-++. |+.....-++.-+....+ ..+.+-.++|.||+..-. ....
T Consensus 285 e~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvLyLtTRgt~~~~-- 362 (670)
T 3ju4_A 285 EVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTRGDR-- 362 (670)
T ss_dssp EEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEEEEEEEESCTTS--
T ss_pred eeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCEEEEEecCcCCCC--
Confidence 45788888888888873321 1222322221 122222222221112333 333344589999998532 2212
Q ss_pred CcceEEEEeCCCCeEEecc-Cccceeee--eEEECCEEEEEeC
Q 028925 78 NSKFVDVYNPERHTWCQMK-NGCVMVTA--HAVVGKKLFCMEW 117 (202)
Q Consensus 78 ~~~~~~~yd~~~~~W~~~~-~~~~~~~~--~~~~~~~iyv~Gg 117 (202)
.-..+.+.+.....|+.+. |....+.. ...+++.||++|.
T Consensus 363 ~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgs 405 (670)
T 3ju4_A 363 LGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGS 405 (670)
T ss_dssp CCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEE
T ss_pred CcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEec
Confidence 2346777877788899887 43333322 3567999999983
No 270
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=81.96 E-value=15 Score=28.14 Aligned_cols=74 Identities=14% Similarity=0.122 Sum_probs=41.0
Q ss_pred CCEEEEEcCccCC--CCCCcceEEEEeCCCCeE-EeccCccceeeeeEEECCE--EEEEeCCCCCeEEEEeCCCCcEEEe
Q 028925 62 DGKLYVMGGRSSF--TIGNSKFVDVYNPERHTW-CQMKNGCVMVTAHAVVGKK--LFCMEWKNQRKLTIFDPEDNSWKMV 136 (202)
Q Consensus 62 ~~~iy~~gG~~~~--~~~~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~--iyv~Gg~~~~~~~~yd~~~~~W~~~ 136 (202)
++++|+....... ......++.++|+.+.+- ..++-......-...-+++ +|+.. ...+.+.+||.++.+-...
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~-~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYALS-AGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEEc-CCCCeEEEEECCCCCEEee
Confidence 4678887532211 111245799999988765 3333111122222333554 55543 2468999999987765443
No 271
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=81.93 E-value=13 Score=27.07 Aligned_cols=105 Identities=16% Similarity=0.255 Sum_probs=53.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCC--CCeEEcCCCCCCceeeeeEEE----CCEEEEEcCccCCCCCCcceEEEEeC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDT--DKWNLIESLRRPRWGCFACSF----DGKLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t--~~W~~~~~~~~~r~~~~~~~~----~~~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
++++++.|+.+ ..+.+||..+ ..++....+...........+ ++++++.|+.+ ..+.+||.
T Consensus 22 ~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-------g~v~vwd~ 88 (351)
T 3f3f_A 22 YGRHVATCSSD------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-------KTVKLWEE 88 (351)
T ss_dssp SSSEEEEEETT------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-------SCEEEEEE
T ss_pred CCCEEEEeeCC------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-------CeEEEEec
Confidence 56666776643 2466666654 344443322222222222333 36777776643 35778877
Q ss_pred CCC-------eEEecc---CccceeeeeEEE-C--CEEEEEeCCCCCeEEEEeCCCCc
Q 028925 88 ERH-------TWCQMK---NGCVMVTAHAVV-G--KKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 88 ~~~-------~W~~~~---~~~~~~~~~~~~-~--~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
.+. .|..+. ............ + +.+++.++ ..+.+.+||..+.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLG-NDGILRLYDALEPS 145 (351)
T ss_dssp CTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTCEEEEEECSSTT
T ss_pred CCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEec-CCCcEEEecCCChH
Confidence 654 222222 111222222222 3 55555554 57789999986554
No 272
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=81.77 E-value=20 Score=29.33 Aligned_cols=66 Identities=14% Similarity=0.102 Sum_probs=38.6
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-C-------ccceeeeeEE-ECCEEEEEeCCCCCeEEEEeCCCCc
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-N-------GCVMVTAHAV-VGKKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-~-------~~~~~~~~~~-~~~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
++++++.|+.+ ..+.+||..+.+-...- . ......++.. .+++.++.++ ..+.+.++|..+.+
T Consensus 201 dg~~las~s~D-------~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s-~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 201 DGSLFASTGGD-------GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS-ADKTIKIWNVATLK 272 (611)
T ss_dssp TSSEEEEEETT-------SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTE
T ss_pred CCCEEEEEECC-------CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe-CCCeEEEEeCCCCc
Confidence 67777776643 46888988766543221 1 1111122222 2566666654 67889999998876
Q ss_pred EEE
Q 028925 133 WKM 135 (202)
Q Consensus 133 W~~ 135 (202)
...
T Consensus 273 ~~~ 275 (611)
T 1nr0_A 273 VEK 275 (611)
T ss_dssp EEE
T ss_pred eee
Confidence 554
No 273
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=81.32 E-value=17 Score=32.11 Aligned_cols=99 Identities=12% Similarity=0.078 Sum_probs=55.4
Q ss_pred eeeE-EEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-Cccce-eeeeEE
Q 028925 31 SSAE-VYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-NGCVM-VTAHAV 107 (202)
Q Consensus 31 ~~~~-~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~-~~~~~~ 107 (202)
..+| +||..+++-..+.. ........+..-+|+.++++.. ...++++|..+.+-..+. ..... ......
T Consensus 358 ~~l~~~~d~~~~~~~~l~~-~~~~~~~~~~SpDG~~la~~~~-------~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFEE-NLGNVFAMGVDRNGKFAVVAND-------RFEIMTVDLETGKPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp EEEEEEEETTTCCEEECCC-CCCSEEEEEECTTSSEEEEEET-------TSEEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred CceEEEEECCCCCceEecC-CccceeeeEECCCCCEEEEECC-------CCeEEEEECCCCceEEeccCCCCCccceEEC
Confidence 3678 88988877666541 1122222222336776666542 247899999888766554 21111 112233
Q ss_pred ECCEEEEEeCC---------CCCeEEEEeCCCCcEEEec
Q 028925 108 VGKKLFCMEWK---------NQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 108 ~~~~iyv~Gg~---------~~~~~~~yd~~~~~W~~~~ 137 (202)
.+++.+++++. ....++++|..+.+...+.
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 46665555432 1258999999888755543
No 274
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=81.18 E-value=16 Score=28.07 Aligned_cols=60 Identities=3% Similarity=0.020 Sum_probs=34.1
Q ss_pred CC-EEEEEcCccCCCCCCcceEEEEeCCCCeE-----EeccCccc------------eeeeeE-EECCEEEEEeCCCCCe
Q 028925 62 DG-KLYVMGGRSSFTIGNSKFVDVYNPERHTW-----CQMKNGCV------------MVTAHA-VVGKKLFCMEWKNQRK 122 (202)
Q Consensus 62 ~~-~iy~~gG~~~~~~~~~~~~~~yd~~~~~W-----~~~~~~~~------------~~~~~~-~~~~~iyv~Gg~~~~~ 122 (202)
++ ++++.|+.+ ..+.+||..+.+- ..+..... ...... ..++++++.++ . +.
T Consensus 237 ~~~~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~-~~ 307 (447)
T 3dw8_B 237 NSCNTFVYSSSK-------GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-Y-LS 307 (447)
T ss_dssp SCTTEEEEEETT-------SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-S-SE
T ss_pred CCCcEEEEEeCC-------CeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-C-Ce
Confidence 44 677776643 4688999877653 22221110 112222 22566666665 4 99
Q ss_pred EEEEeCCC
Q 028925 123 LTIFDPED 130 (202)
Q Consensus 123 ~~~yd~~~ 130 (202)
+.+||..+
T Consensus 308 v~iwd~~~ 315 (447)
T 3dw8_B 308 VKVWDLNM 315 (447)
T ss_dssp EEEEETTC
T ss_pred EEEEeCCC
Confidence 99999875
No 275
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=80.75 E-value=16 Score=27.43 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=80.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEc--CCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLI--ESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++||+.-.. ...++++|+....-+.+ ..+..|+ .+++ .++.||+.--. ....++++++..
T Consensus 90 ~g~ly~~d~~------~~~I~~~~~dG~~~~~l~~~~~~~P~---giavdp~~g~ly~td~~------~~~~I~r~~~dG 154 (318)
T 3sov_A 90 GEKLYWTDSE------TNRIEVSNLDGSLRKVLFWQELDQPR---AIALDPSSGFMYWTDWG------EVPKIERAGMDG 154 (318)
T ss_dssp TTEEEEEETT------TTEEEEEETTSCSCEEEECSSCSSEE---EEEEEGGGTEEEEEECS------SSCEEEEEETTS
T ss_pred CCeEEEEECC------CCEEEEEECCCCcEEEEEeCCCCCcc---EEEEeCCCCEEEEEecC------CCCEEEEEEcCC
Confidence 5677776321 14577888765433333 2222222 2222 36888886411 134688888764
Q ss_pred CeEEecc-CccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCC
Q 028925 90 HTWCQMK-NGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEP 166 (202)
Q Consensus 90 ~~W~~~~-~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~ 166 (202)
..-+.+. ..-....+.++- +++||+... ....|+.+|.+...-+.+.. .......++++.++.+|+..- .
T Consensus 155 ~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~-~~~~I~~~d~dG~~~~~~~~---~~~~~P~glav~~~~lywtd~---~ 227 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLDYEEQKLYWADA-KLNFIHKSNLDGTNRQAVVK---GSLPHPFALTLFEDILYWTDW---S 227 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEC---SCCSCEEEEEEETTEEEEEET---T
T ss_pred CCeEEEEECCCCCccEEEEeccCCEEEEEEC-CCCEEEEEcCCCCceEEEec---CCCCCceEEEEeCCEEEEEec---C
Confidence 3322221 211222333333 789999974 56789999987654444431 112344567778899999742 2
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
...+.++|+.++
T Consensus 228 ~~~V~~~~~~~G 239 (318)
T 3sov_A 228 THSILACNKYTG 239 (318)
T ss_dssp TTEEEEEETTTC
T ss_pred CCeEEEEECCCC
Confidence 347888888655
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=80.52 E-value=17 Score=27.60 Aligned_cols=143 Identities=13% Similarity=0.164 Sum_probs=80.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcC--CCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIE--SLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+++||+.-.. ...++++|+....-+.+. .+..|+ .+++ .++.||+..-. ....++++++..
T Consensus 127 ~g~ly~~d~~------~~~I~~~~~dG~~~~~l~~~~l~~P~---~iavdp~~g~ly~td~~------~~~~I~r~~~dG 191 (349)
T 3v64_C 127 HDKLYWTDSG------TSRIEVANLDGAHRKVLLWQSLEKPR---AIALHPMEGTIYWTDWG------NTPRIEASSMDG 191 (349)
T ss_dssp TTEEEEEETT------TTEEEEEETTSCSCEEEECTTCSCEE---EEEEETTTTEEEEEECS------SSCEEEEEETTS
T ss_pred CCeEEEEcCC------CCeEEEEcCCCCceEEEEeCCCCCcc---eEEEecCcCeEEEeccC------CCCEEEEEeCCC
Confidence 5788877432 136788887655433332 222222 2223 36789987421 125689998865
Q ss_pred CeEEeccC-ccceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCC
Q 028925 90 HTWCQMKN-GCVMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEP 166 (202)
Q Consensus 90 ~~W~~~~~-~~~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~ 166 (202)
..-+.+.. ......+.++ .+++||+... ..+.++.+|.+...-+.+.... .....++++.++.||+....
T Consensus 192 ~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~-~~~~I~~~~~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~--- 264 (349)
T 3v64_C 192 SGRRIIADTHLFWPNGLTIDYAGRRMYWVDA-KHHVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWH--- 264 (349)
T ss_dssp CSCEESCCSSCSCEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSS---CSSEEEEEEETTEEEEEETT---
T ss_pred CCcEEEEECCCCCcceEEEeCCCCEEEEEEC-CCCEEEEEeCCCCceEEEEeCC---CCCceEEEEECCEEEEecCC---
Confidence 44333322 1122233333 3789999974 4678999998764433332111 23345677789999998632
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
...+.+++..++
T Consensus 265 ~~~V~~~~~~~G 276 (349)
T 3v64_C 265 TKSINSANKFTG 276 (349)
T ss_dssp TTEEEEEETTTC
T ss_pred CCeEEEEEccCC
Confidence 346777775443
No 277
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=80.40 E-value=19 Score=28.29 Aligned_cols=64 Identities=5% Similarity=-0.009 Sum_probs=38.4
Q ss_pred ECCEEEEEeCCCCCeEEEEeCCCCcEEEec-cCC-------------CCCCCCCeeEEEE--CCeEEEEcccCCCCceeE
Q 028925 108 VGKKLFCMEWKNQRKLTIFDPEDNSWKMVP-VPL-------------TGSSSIGFRFGIL--DGKLLLFSLEEEPSYSTL 171 (202)
Q Consensus 108 ~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~-~~~-------------~~~~~~~~~~~~~--~~~i~v~gG~~~~~~~~~ 171 (202)
.++.||+... ..+.+.+++++ .....+. ... ......-.++++. ++.|||.-.. .+.+.
T Consensus 353 ~~g~lyvaD~-~n~~I~~~~~~-G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~---n~rIr 427 (433)
T 4hw6_A 353 DEYDFYFCDR-DSHTVRVLTPE-GRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCD---NHRVR 427 (433)
T ss_dssp CCEEEEEEET-TTTEEEEECTT-SEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGG---GTEEE
T ss_pred CCCcEEEEEC-CCCEEEEECCC-CCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCC---CCEEE
Confidence 3568999974 46789999974 4555554 111 1112234456665 7899997532 33677
Q ss_pred EEeCC
Q 028925 172 LYDPN 176 (202)
Q Consensus 172 ~yd~~ 176 (202)
.++++
T Consensus 428 ~i~~e 432 (433)
T 4hw6_A 428 KIAPE 432 (433)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 77665
No 278
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=80.29 E-value=23 Score=29.08 Aligned_cols=103 Identities=15% Similarity=0.053 Sum_probs=53.7
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE-ECC-EEEEEcCccCCCCCCcceEEEEeCC--C
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS-FDG-KLYVMGGRSSFTIGNSKFVDVYNPE--R 89 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~-~iy~~gG~~~~~~~~~~~~~~yd~~--~ 89 (202)
++.+||.... ...+.++|+.+++-... ++....-|.++. -+| .+|+.+ . ...+.+||+. +
T Consensus 166 ~~~~~V~~~~------~~~V~viD~~t~~v~~~--i~~g~~p~~v~~SpDGr~lyv~~-~-------dg~V~viD~~~~t 229 (567)
T 1qks_A 166 ENLFSVTLRD------AGQIALIDGSTYEIKTV--LDTGYAVHISRLSASGRYLFVIG-R-------DGKVNMIDLWMKE 229 (567)
T ss_dssp GGEEEEEETT------TTEEEEEETTTCCEEEE--EECSSCEEEEEECTTSCEEEEEE-T-------TSEEEEEETTSSS
T ss_pred CceEEEEeCC------CCeEEEEECCCCeEEEE--EeCCCCccceEECCCCCEEEEEc-C-------CCeEEEEECCCCC
Confidence 4577777532 24789999998765422 112222223332 355 466643 1 2369999985 4
Q ss_pred CeE-EeccCccceeeeeEE----ECC-EEEEEeCCCCCeEEEEeCCCCcE
Q 028925 90 HTW-CQMKNGCVMVTAHAV----VGK-KLFCMEWKNQRKLTIFDPEDNSW 133 (202)
Q Consensus 90 ~~W-~~~~~~~~~~~~~~~----~~~-~iyv~Gg~~~~~~~~yd~~~~~W 133 (202)
.+- .+++........... .++ .+|+..- ..+.+.++|..+.+=
T Consensus 230 ~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~-~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 230 PTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAY-WPPQYVIMDGETLEP 278 (567)
T ss_dssp CCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE-ETTEEEEEETTTCCE
T ss_pred CcEeEEEecCCCCceeEEccccCCCCCEEEEEEc-cCCeEEEEECCCCcE
Confidence 431 122221111222233 244 5776643 467888999776553
No 279
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=80.19 E-value=13 Score=26.32 Aligned_cols=99 Identities=14% Similarity=0.061 Sum_probs=54.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC--e-EEcCC--CCCC--ceeeeeE-EECCEEEEEcCccCCCCCCcceEEEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK--W-NLIES--LRRP--RWGCFAC-SFDGKLYVMGGRSSFTIGNSKFVDVY 85 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W-~~~~~--~~~~--r~~~~~~-~~~~~iy~~gG~~~~~~~~~~~~~~y 85 (202)
++++|+|-| +..|+||-.+-. . +.+.. +|.. ...++.. ..++++|++-|. ..++|
T Consensus 87 ~~k~yfFkG--------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~---------~ywr~ 149 (218)
T 1gen_A 87 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD---------KFWRY 149 (218)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT---------EEEEE
T ss_pred CCEEEEEeC--------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC---------EEEEE
Confidence 689999976 358999843110 0 11212 1211 1222222 137899999663 58899
Q ss_pred eCCCCeEEeccC---------ccceeeeeEEEC--CEEEEEeCCCCCeEEEEeCCCCc
Q 028925 86 NPERHTWCQMKN---------GCVMVTAHAVVG--KKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 86 d~~~~~W~~~~~---------~~~~~~~~~~~~--~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
|..+++-...-| .+....++...+ +.+|++- .+..+.||..+..
T Consensus 150 d~~~~~v~~gyPr~i~~~w~g~p~~idaAf~~~~~g~~YfFk---g~~y~~~~~~~~~ 204 (218)
T 1gen_A 150 NEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFK---GAYYLKLENQSLK 204 (218)
T ss_dssp ETTTTEECSSCCEEHHHHSSSCCSSCSEEEECTTTCEEEEEE---TTEEEEEETTEEE
T ss_pred ECccccccCCCCcchhhccCCCCCCCCEEEEEcCCCcEEEEE---CCEEEEEECCcee
Confidence 987764322101 111223344444 8999994 4567888876554
No 280
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=79.87 E-value=14 Score=26.31 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=50.6
Q ss_pred EECCEEEEEcCcCCCCCceeeeEEEeCCCC-Ce-----EEcC---CCCCC----ceeeeeEE-ECCEEEEEcCccCCCCC
Q 028925 12 EVNGKIYAVGGYGMDGESLSSAEVYDPDTD-KW-----NLIE---SLRRP----RWGCFACS-FDGKLYVMGGRSSFTIG 77 (202)
Q Consensus 12 ~~~~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W-----~~~~---~~~~~----r~~~~~~~-~~~~iy~~gG~~~~~~~ 77 (202)
..++++|+|-|. .+|+||..++ +- +.+. .+|.. +-.++... -++++|++-|.
T Consensus 70 ~~~~~~yfFkG~--------~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~------ 135 (219)
T 1hxn_A 70 SWEDKLYLIQDT--------KVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR------ 135 (219)
T ss_dssp EETTEEEEEETT--------EEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT------
T ss_pred EECCcEEEecCC--------EEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC------
Confidence 348999999763 5899986532 11 1111 12222 12222221 26899999763
Q ss_pred CcceEEEEeCCCC---eEEeccCccceeeeeEE------------ECCEEEEEeCCCCCeEEEEeCC
Q 028925 78 NSKFVDVYNPERH---TWCQMKNGCVMVTAHAV------------VGKKLFCMEWKNQRKLTIFDPE 129 (202)
Q Consensus 78 ~~~~~~~yd~~~~---~W~~~~~~~~~~~~~~~------------~~~~iyv~Gg~~~~~~~~yd~~ 129 (202)
..++||..+. .|...+..+....++.. .++.+|++-| +..+.||..
T Consensus 136 ---~ywr~d~~~~P~~i~~~~~g~p~~vdAa~~~~~~~~~~~~~~~~~~~YFFkg---~~y~r~~~~ 196 (219)
T 1hxn_A 136 ---RLWWLDLKSGAQATWTELPWPHEKVDGALCMEKPLGPNSCSTSGPNLYLIHG---PNLYCYRHV 196 (219)
T ss_dssp ---EEEEEEGGGGGGCCCEEECCSCSCCSEEEEESSCSSSCCSCSSSCEEEEEET---TEEEEESSH
T ss_pred ---EEEEEeCCCCceEhhhcCCCCCCCcCEEEEccccccccceeccCCeEEEEEC---CEEEEEeCC
Confidence 4788885432 23322211122223333 3467898843 456677653
No 281
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=79.81 E-value=25 Score=29.26 Aligned_cols=142 Identities=10% Similarity=-0.008 Sum_probs=78.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceee-eeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGC-FACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~-~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
+++||+.--. ...++++++.....+.+..... ..+ .+++ .+++||+.-. ....++++++...
T Consensus 48 ~~~lywtD~~------~~~I~r~~~~g~~~~~v~~~g~--~~P~GlAvD~~~~~LY~tD~-------~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 48 DNRIYWTDIS------LKTISRAFMNGSALEHVVEFGL--DYPEGMAVDWLGKNLYWADT-------GTNRIEVSKLDGQ 112 (628)
T ss_dssp TTEEEEEETT------TTEEEEEETTSCSCEEEECSSC--SCCCEEEEETTTTEEEEEET-------TTTEEEEEETTST
T ss_pred CCEEEEEECC------CCeEEEEECCCCCcEEEEeCCC--CCcceEEEEeCCCEEEEEEC-------CCCEEEEEecCCC
Confidence 5788887432 2457888887655554432111 112 2222 4789999743 2357888887654
Q ss_pred eEEecc-CccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE--CCeEEEEcccCC
Q 028925 91 TWCQMK-NGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEE 165 (202)
Q Consensus 91 ~W~~~~-~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~ 165 (202)
.=+.+. .......+.++. ++.||+........+++.+++...-+.+... .....++++. +++||+.-.
T Consensus 113 ~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~----~~~P~GlalD~~~~~LY~aD~--- 185 (628)
T 4a0p_A 113 HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPN----VGRANGLTIDYAKRRLYWTDL--- 185 (628)
T ss_dssp TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS----CSSEEEEEEETTTTEEEEEET---
T ss_pred cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECC----CCCcceEEEccccCEEEEEEC---
Confidence 322222 111122233343 6899998733467888888877665555311 1222334433 578888752
Q ss_pred CCceeEEEeCCC
Q 028925 166 PSYSTLLYDPNA 177 (202)
Q Consensus 166 ~~~~~~~yd~~~ 177 (202)
....++++|+..
T Consensus 186 ~~~~I~~~d~dG 197 (628)
T 4a0p_A 186 DTNLIESSNMLG 197 (628)
T ss_dssp TTTEEEEEETTS
T ss_pred CCCEEEEEcCCC
Confidence 234677777755
No 282
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=78.96 E-value=24 Score=28.54 Aligned_cols=107 Identities=9% Similarity=0.049 Sum_probs=58.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCC---CceeeeeE-------EECCE-EEEEcCccCCCCCCcceE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRR---PRWGCFAC-------SFDGK-LYVMGGRSSFTIGNSKFV 82 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~---~r~~~~~~-------~~~~~-iy~~gG~~~~~~~~~~~~ 82 (202)
+++||+.-.. ...++++|++++..+.+..... .+-...+. ..+++ ||+..-..... .....+
T Consensus 151 ~~~Lyv~~~~------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~-~~~~~V 223 (496)
T 3kya_A 151 KDHLYICYDG------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG-DESPSV 223 (496)
T ss_dssp EEEEEEEEET------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG-GGEEEE
T ss_pred CCEEEEEECC------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc-ccCceE
Confidence 3689998532 2468999999998887654432 12222222 22554 88763221100 012357
Q ss_pred EEEeCCC-CeEE------eccCccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCC
Q 028925 83 DVYNPER-HTWC------QMKNGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPE 129 (202)
Q Consensus 83 ~~yd~~~-~~W~------~~~~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~ 129 (202)
..++... .+|. .++... ...++.+. ++.||+..- ....+++||++
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~-~~g~V~r~d~~ 277 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSY-EKGQVFRLDLV 277 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEET-TTTEEEEECHH
T ss_pred EEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEEC-CCCEEEEEecc
Confidence 7776544 3453 222111 11222332 578998864 45679999987
No 283
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=78.01 E-value=18 Score=26.63 Aligned_cols=137 Identities=11% Similarity=0.012 Sum_probs=70.6
Q ss_pred eeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEE-E
Q 028925 30 LSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAV-V 108 (202)
Q Consensus 30 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~ 108 (202)
...++++|+.+.+-+.+ .........-+|+.+++...... .....++++|..+.+...+..... ...... .
T Consensus 42 ~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~--~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wsp 113 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEE--KKVSEIWVADLETLSSKKILEAKN-IRSLEWNE 113 (347)
T ss_dssp EEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETT--TTEEEEEEEETTTTEEEEEEEESE-EEEEEECT
T ss_pred cceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccC--CCcceEEEEECCCCceEEEEcCCC-ccceeECC
Confidence 56799999998776555 11111111235654444332210 023468899988887766653222 222222 2
Q ss_pred CCE-EEEEeCC-------------------------CCCeEEEEeCCCCcE-EEeccCCCCCCCCCeeEEE-ECCeEEEE
Q 028925 109 GKK-LFCMEWK-------------------------NQRKLTIFDPEDNSW-KMVPVPLTGSSSIGFRFGI-LDGKLLLF 160 (202)
Q Consensus 109 ~~~-iyv~Gg~-------------------------~~~~~~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~-~~~~i~v~ 160 (202)
+++ |++.... ....++++|..+.+. +.+.. . ....++. -++ +++.
T Consensus 114 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~----~~~~~~~spdg-~~~~ 186 (347)
T 2gop_A 114 DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK--P----RFSSGIWHRDK-IVVN 186 (347)
T ss_dssp TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE--E----TTCEEEEETTE-EEEE
T ss_pred CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC--C----CcccccCCCCe-EEEE
Confidence 454 4444311 135688899988887 65543 1 1122233 345 5555
Q ss_pred cccCC-----C-CceeEEEeCCCCCCCcceee
Q 028925 161 SLEEE-----P-SYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 161 gG~~~-----~-~~~~~~yd~~~~~~~~W~~~ 186 (202)
+.... . ...++.+| ++ +++.+
T Consensus 187 ~~~~~~~~~~~~~~~l~~~d--~~---~~~~l 213 (347)
T 2gop_A 187 VPHREIIPQYFKFWDIYIWE--DG---KEEKM 213 (347)
T ss_dssp EECCCSSCCSSCCEEEEEEE--TT---EEEEE
T ss_pred EecccccccccccccEEEeC--CC---ceEEe
Confidence 43321 1 33678888 54 66655
No 284
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=77.22 E-value=18 Score=28.52 Aligned_cols=116 Identities=11% Similarity=0.079 Sum_probs=59.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECC-EEEEEcCccCC--CCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDG-KLYVMGGRSSF--TIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~-~iy~~gG~~~~--~~~~~~~~~~yd~~~~ 90 (202)
..++||.-..... . ...+.++|+.+++-... ++....-..+..-++ .+|+....... .......+.++|+.+.
T Consensus 84 ~~~vyV~n~~~~~-~-~~~VsVID~~t~~vv~~--I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 84 ARRVYIQDPAHFA-A-ITQQFVIDGSTGRILGM--TDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp TTEEEEEECTTTC-S-SEEEEEEETTTTEEEEE--EEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCEEEEECCCcCC-C-CCeEEEEECCCCEEEEE--EECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4689998542111 1 16899999988765322 222222222233344 57776411000 0001346999999988
Q ss_pred eEEe-cc-C-ccc-----eeeee-EEE-CCEEEEEeCCCCCeEEEEeCCCCcE
Q 028925 91 TWCQ-MK-N-GCV-----MVTAH-AVV-GKKLFCMEWKNQRKLTIFDPEDNSW 133 (202)
Q Consensus 91 ~W~~-~~-~-~~~-----~~~~~-~~~-~~~iyv~Gg~~~~~~~~yd~~~~~W 133 (202)
+-.. ++ + .++ ..... ... +..+|+..-...+.+.++|+.+++-
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE
Confidence 6432 22 1 111 11122 222 4478887532356788899888764
No 285
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=77.04 E-value=23 Score=27.99 Aligned_cols=111 Identities=13% Similarity=0.081 Sum_probs=60.2
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEE-E-CCEEEEEeC--------CCCCeEEEEeCCCC
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAV-V-GKKLFCMEW--------KNQRKLTIFDPEDN 131 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~-~~~iyv~Gg--------~~~~~~~~yd~~~~ 131 (202)
..++|+....... ....+.++|+.+.+-...-+..... ...+ . +..+|+... ...+.+..+|+.+.
T Consensus 84 ~~~vyV~n~~~~~---~~~~VsVID~~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 84 ARRVYIQDPAHFA---AITQQFVIDGSTGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp TTEEEEEECTTTC---SSEEEEEEETTTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCEEEEECCCcCC---CCCeEEEEECCCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4568887543211 1168999999988744322222222 2222 2 456888741 12467999999988
Q ss_pred cEEE-eccCCCC-----CCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 132 SWKM-VPVPLTG-----SSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 132 ~W~~-~~~~~~~-----~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+-.. +..+... ..-.+..+...+.++|+..- .....+.++|.+++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~--~~~~~VsVID~~t~ 210 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQF--SPAPAVGVVDLEGK 210 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEEC--SSSCEEEEEETTTT
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEec--CCCCeEEEEECCCC
Confidence 7543 3222011 01112222223557887642 12447899999886
No 286
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=76.79 E-value=34 Score=29.06 Aligned_cols=149 Identities=11% Similarity=0.042 Sum_probs=79.7
Q ss_pred eeeEEEeCCC--CCeEEcCCCCCCceeeeeEEECCEEEEEcCccCC---CCCCcceEEEEeCCC--------CeEEe-cc
Q 028925 31 SSAEVYDPDT--DKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSF---TIGNSKFVDVYNPER--------HTWCQ-MK 96 (202)
Q Consensus 31 ~~~~~yd~~t--~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~---~~~~~~~~~~yd~~~--------~~W~~-~~ 96 (202)
+.++..|+.. .+|.++. + ++........++++|+.....-. .......+...|..+ .+|+. ++
T Consensus 269 ~~~~~~~~~~~~~~~~~l~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKIN-M--PSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp EEEEEEECSSSSCEEEECC-S--CTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred eeEEEEcCCCCCCcceEee-c--CCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 5667777653 5677763 2 33222235679999997543210 001244677777543 46886 54
Q ss_pred Cccc-eeeeeEEECCEEEEEeC-CCCCeEEEEeCCCCcEEEec-cCCCCCCCCCeeEEE--E-CCeEEEEc-ccCCCCce
Q 028925 97 NGCV-MVTAHAVVGKKLFCMEW-KNQRKLTIFDPEDNSWKMVP-VPLTGSSSIGFRFGI--L-DGKLLLFS-LEEEPSYS 169 (202)
Q Consensus 97 ~~~~-~~~~~~~~~~~iyv~Gg-~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~--~-~~~i~v~g-G~~~~~~~ 169 (202)
+... ........++.|++.-- .....+.++|+.++.|.... .+.+. ........ . ++.+++.. +...+ ..
T Consensus 346 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~--~~~~~~~~~~~~~~~~~~~~ss~~~P-~~ 422 (711)
T 4hvt_A 346 PTANEVFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY--QNAIFGMSSYEEEEEALITIENSIVP-PT 422 (711)
T ss_dssp CCTTEEEEEEEECSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCS--TTCEEEEECCTTCSCEEEEEECSSSC-CE
T ss_pred CCCCCeEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCC--CeEEEEEeecCcCCEEEEEEecCCCC-CE
Confidence 4332 33444555677776642 22456888998888775432 22222 11222222 2 34555543 33333 37
Q ss_pred eEEEeCCCCCCCcceeeccc
Q 028925 170 TLLYDPNAASGSEWQTSKIK 189 (202)
Q Consensus 170 ~~~yd~~~~~~~~W~~~~~~ 189 (202)
++.||.. + +++.+...
T Consensus 423 ~~~~d~~-~---~~~~l~~~ 438 (711)
T 4hvt_A 423 IYLWVKT-H---ELKIIRKA 438 (711)
T ss_dssp EEEECTT-S---CEEEEECC
T ss_pred EEEEeCC-C---cEEEEecC
Confidence 8889987 6 67766433
No 287
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=76.76 E-value=31 Score=28.59 Aligned_cols=57 Identities=14% Similarity=0.017 Sum_probs=32.6
Q ss_pred ceEEEEeCCCCeE-EeccCc------ccee-eeeEEECCEEEEEeC---CCCCeEEEEeCCCCcEEEe
Q 028925 80 KFVDVYNPERHTW-CQMKNG------CVMV-TAHAVVGKKLFCMEW---KNQRKLTIFDPEDNSWKMV 136 (202)
Q Consensus 80 ~~~~~yd~~~~~W-~~~~~~------~~~~-~~~~~~~~~iyv~Gg---~~~~~~~~yd~~~~~W~~~ 136 (202)
..+.++|..+.+- ..+... .... ......++++++... .....++++|.++.+...+
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 3788899887762 444421 1111 122334777665542 2235788999988876654
No 288
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=74.82 E-value=31 Score=27.65 Aligned_cols=70 Identities=9% Similarity=-0.063 Sum_probs=36.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCC----CeEEcC---CC--CCCc-eeeeeEE-ECCEEEEEcCccCCCCCCcceE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTD----KWNLIE---SL--RRPR-WGCFACS-FDGKLYVMGGRSSFTIGNSKFV 82 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~----~W~~~~---~~--~~~r-~~~~~~~-~~~~iy~~gG~~~~~~~~~~~~ 82 (202)
+++||+-|... +.++++|.+++ +-.+.- .+ .... .-|.... -+| |||..--+. .......+
T Consensus 95 r~~l~v~~l~s------~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~-~g~~~g~v 166 (462)
T 2ece_A 95 RRFLIVPGLRS------SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNE-EGEGPGGI 166 (462)
T ss_dssp SCEEEEEBTTT------CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEET-TSCSCCEE
T ss_pred CCEEEEccCCC------CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCc-CCCCCCeE
Confidence 56777766442 56999998876 222211 01 0111 2233333 355 887421111 11234679
Q ss_pred EEEeCCCCe
Q 028925 83 DVYNPERHT 91 (202)
Q Consensus 83 ~~yd~~~~~ 91 (202)
.++|+++.+
T Consensus 167 ~vlD~~T~~ 175 (462)
T 2ece_A 167 LMLDHYSFE 175 (462)
T ss_dssp EEECTTTCC
T ss_pred EEEECCCCe
Confidence 999999775
No 289
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=74.44 E-value=27 Score=26.77 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=40.1
Q ss_pred CCEEEEEcCcCC---CCCceeeeEEEeCCCCCe-EEcCCCCCCceeeeeEEECCE-EEEEcCccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGGYGM---DGESLSSAEVYDPDTDKW-NLIESLRRPRWGCFACSFDGK-LYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG~~~---~~~~~~~~~~yd~~t~~W-~~~~~~~~~r~~~~~~~~~~~-iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
++++|+...... .....++++++|+.+++- ..+ ++.. +....+..-+|+ +++.+... ..++.++|..
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g~-~p~~i~~s~Dg~~~l~v~~~~------~~~V~ViD~~ 349 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGH-DVDAISVAQDGGPDLYALSAG------TEVLHIYDAG 349 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-ECCC-CcCeEEECCCCCeEEEEEcCC------CCeEEEEECC
Confidence 578999753211 112346799999987765 333 2222 122233334666 44443211 2579999998
Q ss_pred CCeEEe
Q 028925 89 RHTWCQ 94 (202)
Q Consensus 89 ~~~W~~ 94 (202)
+.+-..
T Consensus 350 t~~vv~ 355 (373)
T 2mad_H 350 AGDQDQ 355 (373)
T ss_pred CCCEEe
Confidence 876443
No 290
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=73.73 E-value=38 Score=28.14 Aligned_cols=158 Identities=14% Similarity=0.026 Sum_probs=71.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEe----CCCCCeEEcCC----CCCCcee-----eeeEEECCE-EEEEcCccCCCCCCc
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYD----PDTDKWNLIES----LRRPRWG-----CFACSFDGK-LYVMGGRSSFTIGNS 79 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd----~~t~~W~~~~~----~~~~r~~-----~~~~~~~~~-iy~~gG~~~~~~~~~ 79 (202)
++++++.... ..+....++++| +.+.++..+.. -...... .....-+|+ |++.....+ ..
T Consensus 263 D~~~~~~~~~--~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~----g~ 336 (719)
T 1z68_A 263 DERVCLQWLK--RVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKD----GY 336 (719)
T ss_dssp SSEEEEEEEE--SSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTT----SC
T ss_pred CCeEEEEEec--cccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccC----Cc
Confidence 6676665321 112335789999 77766544431 1111111 111223555 444322211 24
Q ss_pred ceEEEEeCCCCeEEeccCccceeee-eEEECCEEEEEeCC-----CCCeEEEEeCCCC--cEEEeccCCCCCCCCCeeEE
Q 028925 80 KFVDVYNPERHTWCQMKNGCVMVTA-HAVVGKKLFCMEWK-----NQRKLTIFDPEDN--SWKMVPVPLTGSSSIGFRFG 151 (202)
Q Consensus 80 ~~~~~yd~~~~~W~~~~~~~~~~~~-~~~~~~~iyv~Gg~-----~~~~~~~yd~~~~--~W~~~~~~~~~~~~~~~~~~ 151 (202)
..++.+|..+.+...+......... ...-++.||..+.. ....++..+..+. ..+.+...... .......+
T Consensus 337 ~~l~~~~~~~~~~~~lt~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~-~~~~~~~~ 415 (719)
T 1z68_A 337 KHIHYIKDTVENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRK-ERCQYYTA 415 (719)
T ss_dssp EEEEEESSCSTTCEECSCSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTT-TTBCBEEE
T ss_pred eEEEEEECCCCceEecccCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCC-CCCceEEE
Confidence 5789999888776666532221111 22234566666532 2345666666444 23444321111 11222222
Q ss_pred E--ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 152 I--LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 152 ~--~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
. .+++.+++.........++.||.+++
T Consensus 416 ~~s~dg~~l~~~~s~~~~p~~~l~d~~~g 444 (719)
T 1z68_A 416 SFSDYAKYYALVCYGPGIPISTLHDGRTD 444 (719)
T ss_dssp EECGGGSSEEEEECCBSSCEEEEECSSSC
T ss_pred EECCCCCEEEEEcCCCCCCeEEEEECCCC
Confidence 2 24443333222111125778888765
No 291
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=73.53 E-value=28 Score=26.62 Aligned_cols=26 Identities=15% Similarity=0.279 Sum_probs=18.6
Q ss_pred EEECCEEEEEeCCCCCeEEEEeCCCCc
Q 028925 106 AVVGKKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 106 ~~~~~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
...++.+++.|+ ..+.+.+||..+.+
T Consensus 336 ~~~~~~~l~s~~-~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 336 SVSNDKILLTDE-ATSSIVMFSLNELS 361 (437)
T ss_dssp EEETTEEEEEEG-GGTEEEEEETTCGG
T ss_pred EECCceEEEecC-CCCeEEEEECCCcc
Confidence 333677777765 57789999987765
No 292
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=73.27 E-value=35 Score=27.54 Aligned_cols=97 Identities=6% Similarity=-0.094 Sum_probs=51.1
Q ss_pred ceEEEEeC--CCCeEEeccCccceeeeeEEECC-EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCe
Q 028925 80 KFVDVYNP--ERHTWCQMKNGCVMVTAHAVVGK-KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGK 156 (202)
Q Consensus 80 ~~~~~yd~--~~~~W~~~~~~~~~~~~~~~~~~-~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~ 156 (202)
..++..+. ....- .+.............++ .++++.+ ....+.+||.++.+-+.+... + . ......-||+
T Consensus 90 ~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~-~~~~~~l~d~~~g~~~~l~~~--~--~-~~~~~spDG~ 162 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGA-TEDRVALYALDGGGLRELARL--P--G-FGFVSDIRGD 162 (582)
T ss_dssp EEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEE-CSSCEEEEEEETTEEEEEEEE--S--S-CEEEEEEETT
T ss_pred eEEEEEeccCCCccc-cccCCCCceeeeeCCCCCeEEEEec-CCCCceEEEccCCcEEEeecC--C--C-ceEEECCCCC
Confidence 45777776 43332 33322111222334444 4444443 344455889988877776521 1 1 2222345666
Q ss_pred EEEEcccC-CCCceeEEEeCCCCCCCcceee
Q 028925 157 LLLFSLEE-EPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 157 i~v~gG~~-~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
.++++... .....++++|++++ +.+.+
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g---~~~~l 190 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSG---GLRVF 190 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTC---CCEEE
T ss_pred EEEEEEEcCCCCeEEEEEcCCCC---CceEe
Confidence 65554432 22246999999887 77776
No 293
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=72.61 E-value=48 Score=28.85 Aligned_cols=105 Identities=9% Similarity=-0.000 Sum_probs=53.8
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeCCCCeEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWC 93 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~ 93 (202)
++++.+.|+.+ ..+.+||..+.+-...-....+. ..+....+++++.++. ...+.+||..+.+-.
T Consensus 28 dg~~lAsgs~D------g~I~lw~~~~~~~~~~~~~~~~V--~~l~fspg~~L~S~s~-------D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 28 TQNLLAIATVT------GEVHIYGQQQVEVVIKLEDRSAI--KEMRFVKGIYLVVINA-------KDTVYVLSLYSQKVL 92 (902)
T ss_dssp TTTEEEEEETT------SEEEEECSTTCEEEEECSSCCCE--EEEEEETTTEEEEEET-------TCEEEEEETTTCSEE
T ss_pred CCCEEEEEeCC------CEEEEEeCCCcEEEEEcCCCCCE--EEEEEcCCCEEEEEEC-------cCeEEEEECCCCcEE
Confidence 56777777654 35788887665432221111111 1122233664444432 346889998776532
Q ss_pred eccCccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEE
Q 028925 94 QMKNGCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWK 134 (202)
Q Consensus 94 ~~~~~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~ 134 (202)
..-.......++ ...++..++.|+ ..+.+.+||..+..-.
T Consensus 93 ~~~~~~~~V~~v~~sp~g~~l~sgs-~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 93 TTVFVPGKITSIDTDASLDWMLIGL-QNGSMIVYDIDRDQLS 133 (902)
T ss_dssp EEEECSSCEEEEECCTTCSEEEEEE-TTSCEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEECCCCCEEEEEc-CCCcEEEEECCCCccc
Confidence 211111111111 122455555554 6788999999887643
No 294
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=72.32 E-value=32 Score=26.76 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=44.3
Q ss_pred CCEEEEEcCc--cCCCCCCcceEEEEeCCCCeEEeccCccceeee-eEEECC--EEEEEeCCCCCeEEEEeCCCCcEEEe
Q 028925 62 DGKLYVMGGR--SSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTA-HAVVGK--KLFCMEWKNQRKLTIFDPEDNSWKMV 136 (202)
Q Consensus 62 ~~~iy~~gG~--~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~-~~~~~~--~iyv~Gg~~~~~~~~yd~~~~~W~~~ 136 (202)
++++|+.-+. ........++++++|+.+.+-.+.-+......+ .+..++ .+|+..+ ..+++.+||..+.+-..-
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~~~ly~tn~-~~~~VsViD~~t~k~~~~ 369 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEKPLLYALST-GDKTLYIHDAESGEELRS 369 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSSCEEEEEET-TTTEEEEEETTTCCEEEE
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCCeEEEEEcC-CCCeEEEEECCCCcEEEE
Confidence 6789996321 112222356899999998875443222222222 233454 4777654 578999999998885543
No 295
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=71.97 E-value=28 Score=25.98 Aligned_cols=143 Identities=12% Similarity=0.044 Sum_probs=78.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCC---eEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDK---WNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~ 88 (202)
+++||+.--. ...++++++.... +.....+..+. .+++ .+++||+.-.. ...++++++.
T Consensus 46 ~~~lyw~D~~------~~~I~r~~~~g~~~~~~~~~~~l~~p~---glavd~~~g~ly~~d~~-------~~~I~~~~~d 109 (318)
T 3sov_A 46 HGLIYWSDVS------EEAIKRTEFNKTESVQNVVVSGLLSPD---GLACDWLGEKLYWTDSE-------TNRIEVSNLD 109 (318)
T ss_dssp GTEEEEEETT------TTEEEEEETTSSSCCCEEEEECCSCCC---EEEEETTTTEEEEEETT-------TTEEEEEETT
T ss_pred CCEEEEEECC------CCcEEEEEccCCCceEEEEcCCCCCcc---EEEEEcCCCeEEEEECC-------CCEEEEEECC
Confidence 4678877321 2457888876542 22222222221 2222 47889987431 3468889886
Q ss_pred CCeEEecc-CccceeeeeEE--ECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE--CCeEEEEccc
Q 028925 89 RHTWCQMK-NGCVMVTAHAV--VGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL--DGKLLLFSLE 163 (202)
Q Consensus 89 ~~~W~~~~-~~~~~~~~~~~--~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~ 163 (202)
...-+.+. .......+.++ .++.||+........+++++++...=+.+.... .....++++. +++||+.-.
T Consensus 110 G~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~---l~~Pnglavd~~~~~lY~aD~- 185 (318)
T 3sov_A 110 GSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSE---IYWPNGLTLDYEEQKLYWADA- 185 (318)
T ss_dssp SCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSS---CSCEEEEEEETTTTEEEEEET-
T ss_pred CCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECC---CCCccEEEEeccCCEEEEEEC-
Confidence 54322222 11112223333 268999987434678999998755433332111 1222345543 789999863
Q ss_pred CCCCceeEEEeCCCC
Q 028925 164 EEPSYSTLLYDPNAA 178 (202)
Q Consensus 164 ~~~~~~~~~yd~~~~ 178 (202)
....|+++|++..
T Consensus 186 --~~~~I~~~d~dG~ 198 (318)
T 3sov_A 186 --KLNFIHKSNLDGT 198 (318)
T ss_dssp --TTTEEEEEETTSC
T ss_pred --CCCEEEEEcCCCC
Confidence 3457889988754
No 296
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=71.71 E-value=43 Score=27.89 Aligned_cols=141 Identities=10% Similarity=0.091 Sum_probs=81.6
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEc--CCCCCCceeeeeEE--ECCEEEEEc-CccCCCCCCcceEEEEeCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLI--ESLRRPRWGCFACS--FDGKLYVMG-GRSSFTIGNSKFVDVYNPE 88 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~--~~~~iy~~g-G~~~~~~~~~~~~~~yd~~ 88 (202)
+++||+.-.. ...++++|+....-+.+ ..+..|+ .+++ .+|.||+.- | ....+++.++.
T Consensus 91 ~~~LY~tD~~------~~~I~v~~~dG~~~~~l~~~~l~~P~---~iavdp~~G~lY~tD~g-------~~~~I~r~~~d 154 (628)
T 4a0p_A 91 GKNLYWADTG------TNRIEVSKLDGQHRQVLVWKDLDSPR---ALALDPAEGFMYWTEWG-------GKPKIDRAAMD 154 (628)
T ss_dssp TTEEEEEETT------TTEEEEEETTSTTCEEEECSSCCCEE---EEEEETTTTEEEEEECS-------SSCEEEEEETT
T ss_pred CCEEEEEECC------CCEEEEEecCCCcEEEEEeCCCCCcc---cEEEccCCCeEEEeCCC-------CCCEEEEEeCC
Confidence 5788887321 24688888865433332 2333332 2333 268899864 2 12468888876
Q ss_pred CCeEEeccCccceeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCC
Q 028925 89 RHTWCQMKNGCVMVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEP 166 (202)
Q Consensus 89 ~~~W~~~~~~~~~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~ 166 (202)
...-+.+........+.++- +++||+... ..+.++.+|.+...=+.+... .....++++.+++||+.-. .
T Consensus 155 G~~~~~l~~~~~~P~GlalD~~~~~LY~aD~-~~~~I~~~d~dG~~~~v~~~~----l~~P~glav~~~~ly~tD~---~ 226 (628)
T 4a0p_A 155 GSERTTLVPNVGRANGLTIDYAKRRLYWTDL-DTNLIESSNMLGLNREVIADD----LPHPFGLTQYQDYIYWTDW---S 226 (628)
T ss_dssp SCSCEEEECSCSSEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEEEC----CSCEEEEEEETTEEEEEET---T
T ss_pred CCceEEEECCCCCcceEEEccccCEEEEEEC-CCCEEEEEcCCCCceEEeecc----CCCceEEEEECCEEEEecC---C
Confidence 55434333222222333333 689999974 567899999866433444321 2334577788999999762 2
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
...|++.|..++
T Consensus 227 ~~~I~~~dk~tg 238 (628)
T 4a0p_A 227 RRSIERANKTSG 238 (628)
T ss_dssp TTEEEEEETTTC
T ss_pred CCEEEEEECCCC
Confidence 336777776554
No 297
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=71.38 E-value=43 Score=28.38 Aligned_cols=117 Identities=10% Similarity=0.040 Sum_probs=60.1
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCC-CCeEE-cCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEEEEeC----
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDT-DKWNL-IESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVDVYNP---- 87 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~-~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~~yd~---- 87 (202)
+++||+....+ ......++++|..+ .+|+. +-+......-......++.|++..... ....++++|+
T Consensus 330 g~~l~~~t~~~--~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~-----g~~~l~~~dl~~~~ 402 (751)
T 2xe4_A 330 TSHLVILTNEG--GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRA-----GLTRIWTMMADSQD 402 (751)
T ss_dssp TTEEEEEECTT--TCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEET-----TEEEEEEEECCTTT
T ss_pred CCEEEEEeCCC--CCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeC-----CEEEEEEEeccccc
Confidence 77888886543 11234789999876 57876 422111112122333467777665332 2457888886
Q ss_pred ---CCCe-EEecc-CccceeeeeE-----EEC-CEEEEE-eC-CCCCeEEEEeCCCCcEEEec
Q 028925 88 ---ERHT-WCQMK-NGCVMVTAHA-----VVG-KKLFCM-EW-KNQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 88 ---~~~~-W~~~~-~~~~~~~~~~-----~~~-~~iyv~-Gg-~~~~~~~~yd~~~~~W~~~~ 137 (202)
.+.+ -..++ +......... ..+ +.+++. .. .....++.||..+++.+.+.
T Consensus 403 ~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 403 GVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp SCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCCEEEEE
T ss_pred ccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCcEEEEe
Confidence 3333 44443 2211111110 122 233333 22 12357888998888777665
No 298
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=69.90 E-value=49 Score=27.83 Aligned_cols=142 Identities=15% Similarity=0.115 Sum_probs=74.2
Q ss_pred eeeEEEeCCCCCe--EEcCCCC-CCceeeee-EEECCEEEEEcCccCCCCCCcceEEEEeCCCC--e-EEeccCcccee-
Q 028925 31 SSAEVYDPDTDKW--NLIESLR-RPRWGCFA-CSFDGKLYVMGGRSSFTIGNSKFVDVYNPERH--T-WCQMKNGCVMV- 102 (202)
Q Consensus 31 ~~~~~yd~~t~~W--~~~~~~~-~~r~~~~~-~~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~--~-W~~~~~~~~~~- 102 (202)
.+++++++.+..- ..+-..+ .+...... ..-+|+..++....... ....++++|..+. + |..+.+.....
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 320 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTD--PVNTVHVARVTNGKIGPVTALIPDLKAQW 320 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTC--SCCEEEEEEEETTEECCCEEEECSSSSCE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCC--CcceEEEEECCCCCCcccEEecCCCCceE
Confidence 4578888876542 1221111 11222222 23466544443322211 2457889998776 6 77776332221
Q ss_pred eeeEEECCEEEEEeCC--CCCeEEEEeCCC--CcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 103 TAHAVVGKKLFCMEWK--NQRKLTIFDPED--NSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 103 ~~~~~~~~~iyv~Gg~--~~~~~~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
......++.||+.... ....++.+|.++ ..|+.+- +... ..-..+...++++++...... ...++.++...+
T Consensus 321 ~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~--~~l~~~~~~~~~lv~~~~~dg-~~~l~~~~~~g~ 396 (741)
T 1yr2_A 321 DFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESK--DNLESVGIAGNRLFASYIHDA-KSQVLAFDLDGK 396 (741)
T ss_dssp EEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCS--SEEEEEEEEBTEEEEEEEETT-EEEEEEEETTSC
T ss_pred EEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCC--CeEEEEEEECCEEEEEEEECC-EEEEEEEeCCCC
Confidence 1223456778777531 246799999887 5798875 2222 111223345788777654322 236777886543
No 299
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=69.77 E-value=33 Score=25.77 Aligned_cols=67 Identities=12% Similarity=-0.009 Sum_probs=31.1
Q ss_pred CC-EEEEEeCCCC----CeEEEEeCC-CCcEEEec--cCCCCCCCCCeeEEE---ECCeEEEEcccCCCCceeEEEeCCC
Q 028925 109 GK-KLFCMEWKNQ----RKLTIFDPE-DNSWKMVP--VPLTGSSSIGFRFGI---LDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 109 ~~-~iyv~Gg~~~----~~~~~yd~~-~~~W~~~~--~~~~~~~~~~~~~~~---~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
++ .||+...... ..+.+|+.+ +.+...+. .+.....-...++.. .++.||+.+.. ...+.+|+.+.
T Consensus 265 dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~---~~~v~v~~~~~ 341 (365)
T 1jof_A 265 SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQ---EGWLEIYRWKD 341 (365)
T ss_dssp TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSS---SCEEEEEEEET
T ss_pred CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcC---CCeEEEEEEch
Confidence 44 5776542111 278888875 55555421 111111112233333 24556665422 23567776655
Q ss_pred C
Q 028925 178 A 178 (202)
Q Consensus 178 ~ 178 (202)
+
T Consensus 342 ~ 342 (365)
T 1jof_A 342 E 342 (365)
T ss_dssp T
T ss_pred h
Confidence 4
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=69.13 E-value=48 Score=27.49 Aligned_cols=145 Identities=9% Similarity=0.036 Sum_probs=79.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHT 91 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~ 91 (202)
+++||+.-- ....++++++.....+.+..-....-. .+++ .+++||+.-. ....+++.++....
T Consensus 360 ~~~ly~sD~------~~~~I~r~~~~g~~~~~v~~~~~~~p~-GlAvD~~~~~lY~tD~-------~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 360 EGYIYWTDD------EVRAIRRSFIDGSGSQFVVTAQIAHPD-GIAVDWVARNLYWTDT-------GTDRIEVTRLNGTM 425 (619)
T ss_dssp TTEEEEEET------TTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEET-------TTTEEEEEETTSCS
T ss_pred CCeEEEEeC------CCCeEEEEEcCCCccEEEEECCCCCcC-ceEEecccCcEEEEeC-------CCCcEEEEeCCCCe
Confidence 578888732 124578888876666554321111111 2222 4788999732 23568888876553
Q ss_pred EEeccCccc-eeeeeEEE--CCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE--CCeEEEEcccCCC
Q 028925 92 WCQMKNGCV-MVTAHAVV--GKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEEP 166 (202)
Q Consensus 92 W~~~~~~~~-~~~~~~~~--~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~~ 166 (202)
-+.+..... ...+.++. ++.||+..-.....+++.+.+...=+.+... ......++++. +++||+.-. .
T Consensus 426 ~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~---~l~~P~GlalD~~~~~LY~aD~---~ 499 (619)
T 3s94_A 426 RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNT---SLGWPNGLALDYDEGKIYWGDA---K 499 (619)
T ss_dssp CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---SCSCEEEEEEETTTTEEEEEET---T
T ss_pred EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeC---CCCCCeeeEEcccCCEEEEEEC---C
Confidence 333322111 22233333 5899998743457888888765543333211 11222344443 689999752 2
Q ss_pred CceeEEEeCCCC
Q 028925 167 SYSTLLYDPNAA 178 (202)
Q Consensus 167 ~~~~~~yd~~~~ 178 (202)
...++.++++..
T Consensus 500 ~~~I~~~~~dG~ 511 (619)
T 3s94_A 500 TDKIEVMNTDGT 511 (619)
T ss_dssp TTEEEEEESSSC
T ss_pred CCEEEEEecCCC
Confidence 347888887654
No 301
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=69.05 E-value=42 Score=26.73 Aligned_cols=101 Identities=11% Similarity=0.144 Sum_probs=51.5
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCC
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPL 140 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~ 140 (202)
+++.++.++.+ ..+.++|.....-..+........+. ...+++.++.|+ ....+.+||.....-..+...
T Consensus 314 ~~~~l~t~~~d-------~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~v~~~~~~~~~~~~~~~~- 384 (577)
T 2ymu_A 314 DGQTIASASDD-------KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQTLTGH- 384 (577)
T ss_dssp TSSEEEEEETT-------SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTCCEEEEEECC-
T ss_pred CCCEEEEEeCC-------CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEe-CCCEEEEEcCCCCEEEEecCC-
Confidence 56666655432 35778887766555444222222222 223566666664 567888999766554444311
Q ss_pred CCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCC
Q 028925 141 TGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 141 ~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
. ..-.+++. .+++.++.++.. ..+.+||...
T Consensus 385 ~---~~v~~~~~s~dg~~l~~~~~d---~~v~~~~~~~ 416 (577)
T 2ymu_A 385 S---SSVRGVAFSPDGQTIASASDD---KTVKLWNRNG 416 (577)
T ss_dssp S---SCEEEEEECTTSSCEEEEETT---SEEEEECTTC
T ss_pred C---CCeEEEEECCCCCEEEEEeCC---CEEEEEeCCC
Confidence 1 11112222 256666666432 2566677543
No 302
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=68.48 E-value=37 Score=25.89 Aligned_cols=29 Identities=7% Similarity=0.006 Sum_probs=20.5
Q ss_pred ECCEEEEEeCCCCCeEEEEeCCCCcEEEec
Q 028925 108 VGKKLFCMEWKNQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 108 ~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~ 137 (202)
.++..++.|+ ..+.+.+||..+.+-..+.
T Consensus 352 ~~~~~l~s~s-~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 352 GSDSVVMTGS-YNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp TTSSEEEEEC-STTEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEec-cCCEEEEEEcCCCcceeee
Confidence 3555555654 6789999999988766543
No 303
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=68.38 E-value=41 Score=26.34 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=56.4
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEE-ECC-EEEEEeCC---CCCeEEEEeCCCCcEE--
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAV-VGK-KLFCMEWK---NQRKLTIFDPEDNSWK-- 134 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~~~-~iyv~Gg~---~~~~~~~yd~~~~~W~-- 134 (202)
++.||+.--. ..+.++|+.+++.+.+.+.........+ .++ .||+.... ....+..++.+. .+.
T Consensus 149 ~g~Lyv~d~~--------~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g-~~~~~ 219 (430)
T 3tc9_A 149 HNHLYLVGEQ--------HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES-GFKVI 219 (430)
T ss_dssp EEEEEEEEBT--------EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG-TSCSE
T ss_pred CCeEEEEeCC--------CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC-ceeee
Confidence 3678887321 5789999999887776542222222222 234 49999642 123466666543 232
Q ss_pred -EeccCCCCCCCCCeeEEEE--CCeEEEEcccCCCCceeEEEeCCCC
Q 028925 135 -MVPVPLTGSSSIGFRFGIL--DGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 135 -~~~~~~~~~~~~~~~~~~~--~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.++. ......+++. ++.||+..- ....+++|++++.
T Consensus 220 ~~l~~-----~~~p~giavdp~~g~lyv~d~---~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 220 TELTK-----GQNCNGAETHPINGELYFNSW---NAGQVFRYDFTTQ 258 (430)
T ss_dssp EEEEE-----CSSCCCEEECTTTCCEEEEET---TTTEEEEEETTTT
T ss_pred eeecc-----CCCceEEEEeCCCCEEEEEEC---CCCEEEEEECCCC
Confidence 3321 1122233343 688998752 2347999999875
No 304
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=68.24 E-value=22 Score=26.52 Aligned_cols=59 Identities=14% Similarity=0.254 Sum_probs=43.4
Q ss_pred EECCEEEEEcCcCCCC-CceeeeEEEeC-CCCCeEEcCCCCCCceeeeeEEECCEEEEEcCc
Q 028925 12 EVNGKIYAVGGYGMDG-ESLSSAEVYDP-DTDKWNLIESLRRPRWGCFACSFDGKLYVMGGR 71 (202)
Q Consensus 12 ~~~~~iyv~GG~~~~~-~~~~~~~~yd~-~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~ 71 (202)
..+++.+++|...... ...+.+.-|.- ..++|+.++.+......+-.+.++|++. +||.
T Consensus 38 ~~~Gk~~I~GRVE~Rd~se~S~V~fFeet~~d~w~~v~~~~~~LqDPF~t~I~gEli-~GGv 98 (315)
T 2b4w_A 38 SYKGKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAVPELSWELEDPYIAKINNEMI-FGGT 98 (315)
T ss_dssp EETTEEEEEEEEECTTCSSCCEEEEEEEEETTEEEECTTCCBSCEEEEEEEETTEEE-EEEE
T ss_pred eECCEEEEEeeeecCCCccccEEEEEEEcCCCceEECCCCEEEecCccEEEECCEEE-eeeE
Confidence 4588999998654333 24467777765 6889999988666778888899999987 4554
No 305
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=66.13 E-value=61 Score=27.49 Aligned_cols=146 Identities=6% Similarity=0.025 Sum_probs=74.1
Q ss_pred eeeeEEEeCCCC--Ce--EEcCCCCCCceeeeeE-EECCEEEEEcCccCCCCCCcceEEEEeCCC-CeEEe-cc-Cccc-
Q 028925 30 LSSAEVYDPDTD--KW--NLIESLRRPRWGCFAC-SFDGKLYVMGGRSSFTIGNSKFVDVYNPER-HTWCQ-MK-NGCV- 100 (202)
Q Consensus 30 ~~~~~~yd~~t~--~W--~~~~~~~~~r~~~~~~-~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~-~~W~~-~~-~~~~- 100 (202)
..+++++|+.+. ++ +.+.+-..... .... ..++.||+.+-... .....++.+|..+ ..|+. +- ....
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~~~-~s~~~~~g~~l~~~t~~~~---a~~~~L~~~d~~~~~~~~~~li~~~~~~ 369 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKGVR-YDVQMHGTSHLVILTNEGG---AVNHKLLIAPRGQPSDWSHVLVDHSEDV 369 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTTCC-EEEEEETTTEEEEEECTTT---CTTCEEEEEETTSTTCCCCEEECCCSSE
T ss_pred CceEEEEECCCCCCCceeEEeecCCCCce-EEEeeeeCCEEEEEeCCCC---CCCcEEEEEcCCCcccceeeEECCCCCc
Confidence 357899998875 46 55543221111 1111 22677888754320 1235788899876 67876 43 2221
Q ss_pred eeeeeEEECCEEEEEeC-CCCCeEEEEeC-------CCCc-EEEeccCCCCCCCCCeeEE-----EEC-CeEEEE-cccC
Q 028925 101 MVTAHAVVGKKLFCMEW-KNQRKLTIFDP-------EDNS-WKMVPVPLTGSSSIGFRFG-----ILD-GKLLLF-SLEE 164 (202)
Q Consensus 101 ~~~~~~~~~~~iyv~Gg-~~~~~~~~yd~-------~~~~-W~~~~~~~~~~~~~~~~~~-----~~~-~~i~v~-gG~~ 164 (202)
........++.|++... .....++++|+ ++.. -+.+..+ . ......+. ..+ +.+++. ....
T Consensus 370 ~l~~~~~~~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~--~-~~~~~~~~~~~~~~~~~~~l~~~~ss~~ 446 (751)
T 2xe4_A 370 FMESIAVRSNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVME--E-PIFTVHLVESQMLEYEEPTFRMEYSSLA 446 (751)
T ss_dssp EEEEEEECSSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCC--C-SSCEEEECGGGCCCTTCSCEEEEEEETT
T ss_pred EEEEEEEECCEEEEEEEeCCEEEEEEEecccccccccCCccceEECCC--C-ceeEEEeccCcccCCCCCEEEEEEeCCC
Confidence 22333445677776642 12457888886 3444 4555311 1 01111110 123 344443 3222
Q ss_pred CCCceeEEEeCCCCCCCcceee
Q 028925 165 EPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 165 ~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
. ...++.||..++ +.+.+
T Consensus 447 ~-P~~~~~~d~~~~---~~~~l 464 (751)
T 2xe4_A 447 T-PNTWFDVSPQDH---SRTAV 464 (751)
T ss_dssp E-EEEEEEECTTTC---CEEEE
T ss_pred C-CCEEEEEECCCC---cEEEE
Confidence 2 237888898877 66555
No 306
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=64.49 E-value=39 Score=24.75 Aligned_cols=16 Identities=25% Similarity=0.223 Sum_probs=11.6
Q ss_pred ceEEEEECCEEEEEcC
Q 028925 7 DFACAEVNGKIYAVGG 22 (202)
Q Consensus 7 ~~~~~~~~~~iyv~GG 22 (202)
.|+++.-+++||..|-
T Consensus 34 ~h~~~l~~G~v~~wG~ 49 (282)
T 3qhy_B 34 FHGLALKGGKVLGWGA 49 (282)
T ss_dssp SEEEEEETTEEEEEEC
T ss_pred CeEEEEECCEEEEEeC
Confidence 4555555999999984
No 307
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=64.10 E-value=42 Score=24.99 Aligned_cols=118 Identities=12% Similarity=0.070 Sum_probs=61.1
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccC-------ccceeeeeEEE-CCEEEEEeCCC----CCeEEEEeCC
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKN-------GCVMVTAHAVV-GKKLFCMEWKN----QRKLTIFDPE 129 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~-------~~~~~~~~~~~-~~~iyv~Gg~~----~~~~~~yd~~ 129 (202)
+|++|+........ . .++..++ +.+-...+. ......++.+. +++||++.-.. ...+..||++
T Consensus 27 ~g~~~v~~~~~~~~--~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~ 101 (343)
T 2qe8_A 27 DGRLFLSLHQFYQP--E-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTL 101 (343)
T ss_dssp TSCEEEEECGGGCC--S-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETT
T ss_pred CCCEEEEeCCCCCC--c-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECC
Confidence 78898874321111 1 3566666 444333321 01112333332 58999986321 4689999999
Q ss_pred CCcE-EEeccCCC--CCCCCCeeEEEE--CCeEEEEcccCCCCceeEEEeCCCCCCCcceee
Q 028925 130 DNSW-KMVPVPLT--GSSSIGFRFGIL--DGKLLLFSLEEEPSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 130 ~~~W-~~~~~~~~--~~~~~~~~~~~~--~~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~ 186 (202)
+++- ..+..+.. ........+++. ++.+|+..........+.+||++++. .|+.+
T Consensus 102 tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~--~~r~~ 161 (343)
T 2qe8_A 102 NNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL--AARVL 161 (343)
T ss_dssp TTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC--EEEEC
T ss_pred CCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC--EEEEe
Confidence 8873 33432211 111122334444 57899875211123478999987651 45554
No 308
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=64.06 E-value=43 Score=25.04 Aligned_cols=65 Identities=9% Similarity=0.049 Sum_probs=35.8
Q ss_pred CCEEEEEeCCCCCe-EEEEeCCCCcEEEeccCCCCCCCCCeeEEE-ECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 109 GKKLFCMEWKNQRK-LTIFDPEDNSWKMVPVPLTGSSSIGFRFGI-LDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~-~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~-~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
++++++.|+ ..+. +.+||..+.+-...-..... ...-.+++. .+++.++.++.. ..+.+||.++.
T Consensus 206 ~g~~l~s~s-~d~~~v~iwd~~~~~~~~~~~~g~h-~~~v~~~~~s~~~~~l~s~s~d---~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCS-QDGTIIRVFKTEDGVLVREFRRGLD-RADVVDMKWSTDGSKLAVVSDK---WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEE-TTCSEEEEEETTTCCEEEEEECTTC-CSCEEEEEECTTSCEEEEEETT---CEEEEEESSCC
T ss_pred CCCEEEEEe-CCCCEEEEEECCCCcEEEEEEcCCC-CCcEEEEEECCCCCEEEEEECC---CEEEEEEccCC
Confidence 666666665 5565 99999987654332110001 111122222 267777777543 36888888654
No 309
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=63.33 E-value=43 Score=24.77 Aligned_cols=62 Identities=8% Similarity=0.071 Sum_probs=34.1
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEe-ccCccceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCC
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQ-MKNGCVMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDN 131 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~ 131 (202)
++.+++.|+.+ ..+.+||..+.+... +........+.. ..+++.++.|+ ..+.+.+||....
T Consensus 87 ~~~~l~s~s~D-------~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~-~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 87 ENCFAISSSWD-------KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG-AEREIKLWNILGE 150 (343)
T ss_dssp STTEEEEEETT-------SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE-TTSCEEEEESSSC
T ss_pred CCCEEEEEcCC-------CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc-CCCEEEEEeccCC
Confidence 55666655532 468899988765332 222222222222 23555555554 5678888988644
No 310
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=62.73 E-value=66 Score=26.70 Aligned_cols=107 Identities=8% Similarity=-0.017 Sum_probs=57.2
Q ss_pred ECCEEEEEcCcCCCCCceeeeEEEeCCCCC--------eEEcCC-CC--CCceeeeeEEECCEEEEEcCccCCCCCCcce
Q 028925 13 VNGKIYAVGGYGMDGESLSSAEVYDPDTDK--------WNLIES-LR--RPRWGCFACSFDGKLYVMGGRSSFTIGNSKF 81 (202)
Q Consensus 13 ~~~~iyv~GG~~~~~~~~~~~~~yd~~t~~--------W~~~~~-~~--~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~ 81 (202)
.+++..+.||.+ ..+.+||+.++. ...+.. .. .... ..++..++. ++.++. .+.
T Consensus 139 PDG~~LAsgs~D------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V-~sVawSPdg-Laass~-------D~t 203 (588)
T 2j04_A 139 PIESSIVVGNED------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWV-THIVWYEDV-LVAALS-------NNS 203 (588)
T ss_dssp SSSSCEEEEETT------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCE-EEEEEETTE-EEEEET-------TCC
T ss_pred CCCCEEEEEcCC------CEEEEEECCCCccccccceeeeeeecccccccccE-EEEEEcCCc-EEEEeC-------CCe
Confidence 377888887764 357888988764 122210 11 1111 122233444 555543 246
Q ss_pred EEEEeCCCCe----EEecc-CccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEec
Q 028925 82 VDVYNPERHT----WCQMK-NGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 82 ~~~yd~~~~~----W~~~~-~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~ 137 (202)
+.++|..++. |..+. ........+...+ ...+.++ .+.+.+||..+..-....
T Consensus 204 VrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg-~~LASa~--~~tIkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 204 VFSMTVSASSHQPVSRMIQNASRRKITDLKIVD-YKVVLTC--PGYVHKIDLKNYSISSLK 261 (588)
T ss_dssp EEEECCCSSSSCCCEEEEECCCSSCCCCEEEET-TEEEEEC--SSEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCccccceeeecccccCcEEEEEEEC-CEEEEEe--CCeEEEEECCCCeEEEEE
Confidence 8888887665 33342 2222223333334 4444444 479999999888775553
No 311
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=59.65 E-value=42 Score=25.34 Aligned_cols=65 Identities=14% Similarity=0.173 Sum_probs=36.7
Q ss_pred CCEEEEEcCcC----CCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE-ECCE-EEEEcCccCCCCCCcceEEEEeC
Q 028925 14 NGKIYAVGGYG----MDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS-FDGK-LYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 14 ~~~iyv~GG~~----~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~-iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
++++|+....+ ........++++|+.+++- +..++... -..++. -+|+ ||+.++ ..+.+||.
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~--v~~i~~~~-p~~ia~spdg~~l~v~n~---------~~v~v~D~ 332 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR--VARIPGRD-ALSMTIDQQRNLMLTLDG---------GNVNVYDI 332 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE--EEEEECTT-CCEEEEETTTTEEEEECS---------SCEEEEEC
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcE--EEEEecCC-eeEEEECCCCCEEEEeCC---------CeEEEEEC
Confidence 47999985311 1112245799999988753 33333333 223222 3554 554431 46899999
Q ss_pred CCC
Q 028925 88 ERH 90 (202)
Q Consensus 88 ~~~ 90 (202)
.+.
T Consensus 333 ~t~ 335 (361)
T 2oiz_A 333 SQP 335 (361)
T ss_dssp SSS
T ss_pred CCC
Confidence 887
No 312
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=59.31 E-value=15 Score=30.71 Aligned_cols=99 Identities=14% Similarity=0.055 Sum_probs=51.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCC--Ce-EEcCC--CCC--CceeeeeE-EECCEEEEEcCccCCCCCCcceEEEE
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTD--KW-NLIES--LRR--PRWGCFAC-SFDGKLYVMGGRSSFTIGNSKFVDVY 85 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W-~~~~~--~~~--~r~~~~~~-~~~~~iy~~gG~~~~~~~~~~~~~~y 85 (202)
++++|+|-| +..|+||..+- .+ +.+.. +|. .+..++.. ..++++|++-|. ..++|
T Consensus 500 ~~k~yFFkG--------~~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~---------~ywry 562 (631)
T 1ck7_A 500 EEKAVFFAG--------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD---------KFWRY 562 (631)
T ss_dssp TTEEEEEET--------TEEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT---------EEEEE
T ss_pred CCEEEEEec--------CEEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC---------EEEEE
Confidence 678999966 25788885310 01 11211 121 11222222 147899999663 58889
Q ss_pred eCCCCeEEeccC---------ccceeeeeEEEC--CEEEEEeCCCCCeEEEEeCCCCc
Q 028925 86 NPERHTWCQMKN---------GCVMVTAHAVVG--KKLFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 86 d~~~~~W~~~~~---------~~~~~~~~~~~~--~~iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
|..+++-...-| .+....++...+ +++|++- ....+.||..+..
T Consensus 563 d~~~~~vd~gYPk~i~~~w~G~p~~iDAAf~~~~~g~~YFFk---G~~Ywr~d~~~~~ 617 (631)
T 1ck7_A 563 NEVKKKMDPGFPKLIADAWNAIPDNLDAVVDLQGGGHSYFFK---GAYYLKLENQSLK 617 (631)
T ss_dssp ETTTTEECTTCCEETTTSCSSCCTTCCEEECCTTSCBCEEEE---TTEEECCBTTBTT
T ss_pred cCCcccccCCCCcchHhhcCCCCCCCcEeEEEcCCCeEEEEE---CCEEEEEeCccce
Confidence 876654221101 111123333433 7899984 4456777765443
No 313
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=57.90 E-value=29 Score=26.44 Aligned_cols=62 Identities=11% Similarity=0.034 Sum_probs=31.2
Q ss_pred EEECCEEEEEeCCCCCeEEEEeCCCCc--EEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 106 AVVGKKLFCMEWKNQRKLTIFDPEDNS--WKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 106 ~~~~~~iyv~Gg~~~~~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
++.++.||+.+ ....++.+|.++.+ |+.-.. + .. ...+..++++|+.+.. ...++.+|.+++
T Consensus 6 ~v~~~~v~~gs--~dg~v~a~d~~tG~~~W~~~~~---~-~~--s~p~~~~g~~~v~~s~---dg~l~a~d~~tG 69 (369)
T 2hz6_A 6 TLPETLLFVST--LDGSLHAVSKRTGSIKWTLKED---P-VL--QVPTHVEEPAFLPDPN---DGSLYTLGSKNN 69 (369)
T ss_dssp --CTTEEEEEE--TTSEEEEEETTTCCEEEEEECC---C-SC--CCC-----CCEEECTT---TCCEEEC-----
T ss_pred eeeCCEEEEEc--CCCEEEEEECCCCCEEEEecCC---C-ce--ecceEcCCCEEEEeCC---CCEEEEEECCCC
Confidence 45577788764 45789999987765 776531 1 11 1223456778887532 236888898654
No 314
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=57.27 E-value=67 Score=25.03 Aligned_cols=119 Identities=10% Similarity=-0.020 Sum_probs=57.1
Q ss_pred CEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc-CccceeeeeE-EECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCC
Q 028925 63 GKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK-NGCVMVTAHA-VVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPL 140 (202)
Q Consensus 63 ~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~~~~~~~~~-~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~ 140 (202)
+.+++.++.+ ..+.+||..+.+-.... .......++. ..+++.++.|+ ..+.+.+||+....-..+..+.
T Consensus 162 ~~~las~s~D-------g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~~~~~ 233 (434)
T 2oit_A 162 PSMVAVCLAD-------GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVIPCPP 233 (434)
T ss_dssp TTEEEEEETT-------SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEECCCT
T ss_pred CCEEEEEECC-------CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccccCCc
Confidence 5666666543 45888998776322111 1111122222 22566666665 6778999999833333333221
Q ss_pred CCCCC---CCeeEEEECCeEEEEccc-----CCCCceeEEEeCCCCC---CCcceeeccc
Q 028925 141 TGSSS---IGFRFGILDGKLLLFSLE-----EEPSYSTLLYDPNAAS---GSEWQTSKIK 189 (202)
Q Consensus 141 ~~~~~---~~~~~~~~~~~i~v~gG~-----~~~~~~~~~yd~~~~~---~~~W~~~~~~ 189 (202)
..... ...++....+..|++... ......+.+||..+.. +..|+...++
T Consensus 234 ~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~ 293 (434)
T 2oit_A 234 FYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEP 293 (434)
T ss_dssp TCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCS
T ss_pred ccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccC
Confidence 11000 122333334555553321 1222358888876431 2356666433
No 315
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=56.84 E-value=63 Score=24.62 Aligned_cols=67 Identities=4% Similarity=-0.040 Sum_probs=33.8
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc--C-----ccceeeee-EE-------ECCEEEEEeCCCCCeEEEE
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK--N-----GCVMVTAH-AV-------VGKKLFCMEWKNQRKLTIF 126 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~--~-----~~~~~~~~-~~-------~~~~iyv~Gg~~~~~~~~y 126 (202)
++.+|++... ....++.+|..++.|.--- + .|....+. ++ .++.+|+ |. ....++.+
T Consensus 55 ~~~~~vv~p~------~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~-Gs-~~g~l~al 126 (339)
T 2be1_A 55 TYETLIIEPF------GDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYT-GS-MRTIMYTI 126 (339)
T ss_dssp SSEEEEECCS------TTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEE-CE-EEEEEEEE
T ss_pred CCcEEEEEEC------CCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEE-Ee-cCCEEEEE
Confidence 5567766421 1246788888776554211 1 11111111 22 4555554 32 46677788
Q ss_pred eCCCCc--EEEe
Q 028925 127 DPEDNS--WKMV 136 (202)
Q Consensus 127 d~~~~~--W~~~ 136 (202)
|..+.+ |+.-
T Consensus 127 d~~tG~~~W~~~ 138 (339)
T 2be1_A 127 NMLNGEIISAFG 138 (339)
T ss_dssp ETTTCCEEEEES
T ss_pred ECCCCcEEEEEe
Confidence 877765 6553
No 316
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=56.78 E-value=68 Score=24.98 Aligned_cols=60 Identities=18% Similarity=0.078 Sum_probs=32.0
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCC
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPER 89 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~ 89 (202)
+.+++.|+.+ ..+.+||+.+++-... ... .......+. -+|+.++.|+.+ ..+.+||+..
T Consensus 162 ~~~las~s~D------g~v~iwD~~~~~~~~~-~~~-~~~~v~~v~wspdg~~lasgs~d-------g~v~iwd~~~ 223 (434)
T 2oit_A 162 PSMVAVCLAD------GSIAVLQVTETVKVCA-TLP-STVAVTSVCWSPKGKQLAVGKQN-------GTVVQYLPTL 223 (434)
T ss_dssp TTEEEEEETT------SCEEEEEESSSEEEEE-EEC-GGGCEEEEEECTTSSCEEEEETT-------SCEEEECTTC
T ss_pred CCEEEEEECC------CeEEEEEcCCCcceee-ccC-CCCceeEEEEcCCCCEEEEEcCC-------CcEEEEccCC
Confidence 5667766654 3578888876632111 111 111122222 267766666643 4688999873
No 317
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=56.42 E-value=65 Score=24.68 Aligned_cols=152 Identities=15% Similarity=0.144 Sum_probs=76.5
Q ss_pred CCEEEEEcCcCCCC------CceeeeEEEeCCC--CCeEEcCCCC-----CCceeeeeEEE---CC--EEEEEcCccCCC
Q 028925 14 NGKIYAVGGYGMDG------ESLSSAEVYDPDT--DKWNLIESLR-----RPRWGCFACSF---DG--KLYVMGGRSSFT 75 (202)
Q Consensus 14 ~~~iyv~GG~~~~~------~~~~~~~~yd~~t--~~W~~~~~~~-----~~r~~~~~~~~---~~--~iy~~gG~~~~~ 75 (202)
++.+|+..|..... .....+++||+++ .+-+++.... ..-.-|..... ++ +||++.-..
T Consensus 60 ~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~--- 136 (355)
T 3sre_A 60 NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG--- 136 (355)
T ss_dssp TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST---
T ss_pred CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC---
Confidence 56888876532111 1245799999984 3444442211 11233444432 34 477774321
Q ss_pred CCCcceEEEEeCCCCeEEecc-----CccceeeeeEEECCEEEEEeCC----------------CCCeEEEEeCCCCcEE
Q 028925 76 IGNSKFVDVYNPERHTWCQMK-----NGCVMVTAHAVVGKKLFCMEWK----------------NQRKLTIFDPEDNSWK 134 (202)
Q Consensus 76 ~~~~~~~~~yd~~~~~W~~~~-----~~~~~~~~~~~~~~~iyv~Gg~----------------~~~~~~~yd~~~~~W~ 134 (202)
....-+++.+|+.+.....+. +..+.....+.-++.+|+-+.. ....++.||+. +.+
T Consensus 137 ~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~ 214 (355)
T 3sre_A 137 SSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR 214 (355)
T ss_dssp TCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCE
T ss_pred CCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEE
Confidence 112334566777766655544 2223344456668898886521 13568888884 444
Q ss_pred EeccCCCCCCCCCeeEEEE-C-CeEEEEcccCCCCceeEEEeCCC
Q 028925 135 MVPVPLTGSSSIGFRFGIL-D-GKLLLFSLEEEPSYSTLLYDPNA 177 (202)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~-~-~~i~v~gG~~~~~~~~~~yd~~~ 177 (202)
.+.... ...-+++.- + ..+|+..- ....+++|+...
T Consensus 215 ~~~~~l----~~pNGia~spDg~~lYvadt---~~~~I~~~~~~~ 252 (355)
T 3sre_A 215 VVAEGF----DFANGINISPDGKYVYIAEL---LAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEE----SSEEEEEECTTSSEEEEEEG---GGTEEEEEEECT
T ss_pred EeecCC----cccCcceECCCCCEEEEEeC---CCCeEEEEEECC
Confidence 443111 111123332 3 46777642 234688888754
No 318
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=56.23 E-value=24 Score=29.34 Aligned_cols=148 Identities=14% Similarity=0.024 Sum_probs=73.7
Q ss_pred eeeEEEeCCCCCeEE-cCCCCCCceeeeeEE-ECCE-EEEEcCccCCCCCCcceEEEEeCCCCe-------------EEe
Q 028925 31 SSAEVYDPDTDKWNL-IESLRRPRWGCFACS-FDGK-LYVMGGRSSFTIGNSKFVDVYNPERHT-------------WCQ 94 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~-~~~~~~~r~~~~~~~-~~~~-iy~~gG~~~~~~~~~~~~~~yd~~~~~-------------W~~ 94 (202)
+.+-+.|..+.+... +...|.+..-|.+.. -+|+ +|+.+.. ...+.+||..+.+ -.+
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-------s~~VsVid~~~~~~~~~~~l~~~~~v~~~ 326 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL-------SPTVTVLDVTRFDAVFYENADPRSAVVAE 326 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT-------SSBEEEEEGGGHHHHHHSCCCGGGGEEEC
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC-------CCeEEEEECcccccccccccCcccceEEE
Confidence 457788888733222 111222333344443 3566 5554432 3568899887542 112
Q ss_pred ccCccceeeeeEEECCEEEEEeCCCCCeEEEEeCCC--------CcEEEeccCCCCCCCCCe-------eEEEECCeEEE
Q 028925 95 MKNGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPED--------NSWKMVPVPLTGSSSIGF-------RFGILDGKLLL 159 (202)
Q Consensus 95 ~~~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~--------~~W~~~~~~~~~~~~~~~-------~~~~~~~~i~v 159 (202)
++......+....-++.+|+.-. -.+.+..+|.++ +.++.+...... ...++ +....+..+|+
T Consensus 327 v~vG~gP~h~aF~~dG~aY~t~~-ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~-yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 327 PELGLGPLHTAFDGRGNAYTSLF-LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH-YQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp CBCCSCEEEEEECTTSEEEEEET-TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS-SCEEEEEETTTTSTTCCSSEEEE
T ss_pred cCCCCCcceEEECCCCeEEEEEe-cCCcEEEEEhhHhhhhhcccccceeEEEeecc-cccccceeccceEeCCCCCEEEE
Confidence 22222233334444678888754 456777788765 224444311111 01111 11123556777
Q ss_pred EcccCCCC---------ceeEEEeCCCCCCCcceeecccC
Q 028925 160 FSLEEEPS---------YSTLLYDPNAASGSEWQTSKIKP 190 (202)
Q Consensus 160 ~gG~~~~~---------~~~~~yd~~~~~~~~W~~~~~~p 190 (202)
......+. .....||++.+ +=+.+.+.|
T Consensus 405 ~Nk~skdr~~~~gp~~~~~~ql~dis~~---~m~lv~d~p 441 (595)
T 1fwx_A 405 LSKFSKDRFLNVGPLKPENDQLIDISGD---KMVLVHDGP 441 (595)
T ss_dssp EESCCTTSSCCCCSSCCEEEEEEECSSS---SCEEEEEEE
T ss_pred cCCCCccccccCCCCCCCcceEEEcCCC---cEEEEEEEc
Confidence 76654332 14477899777 666664444
No 319
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=54.37 E-value=1e+02 Score=26.20 Aligned_cols=121 Identities=6% Similarity=0.024 Sum_probs=64.2
Q ss_pred EEEECCEEEEEcCcC--C--CCCceeeeEEEeCCC--------CCeEE-cCCCCCCceeeeeEEECCEEEEEcCccCCCC
Q 028925 10 CAEVNGKIYAVGGYG--M--DGESLSSAEVYDPDT--------DKWNL-IESLRRPRWGCFACSFDGKLYVMGGRSSFTI 76 (202)
Q Consensus 10 ~~~~~~~iyv~GG~~--~--~~~~~~~~~~yd~~t--------~~W~~-~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~ 76 (202)
....++++|+....+ . ...+...+.+.|+.+ .+|+. +++ ...+.--.....++.|++..-..
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~l~~~~~~~---- 369 (711)
T 4hvt_A 295 QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTP-TANEVFNFISTTKDRVFLATYDN---- 369 (711)
T ss_dssp EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECC-CTTEEEEEEEECSSCEEEEEEET----
T ss_pred eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECC-CCCCeEEEEEEECCEEEEEEEEC----
Confidence 346689999976432 0 011234677777654 46887 433 12222223344567777654322
Q ss_pred CCcceEEEEeCCCCeEEe---cc-CccceeeeeE-EE-CCEEEEEe-C-CCCCeEEEEeCCCCcEEEec
Q 028925 77 GNSKFVDVYNPERHTWCQ---MK-NGCVMVTAHA-VV-GKKLFCME-W-KNQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 77 ~~~~~~~~yd~~~~~W~~---~~-~~~~~~~~~~-~~-~~~iyv~G-g-~~~~~~~~yd~~~~~W~~~~ 137 (202)
....+.++|+.+++|.. ++ |......... .. ++.+++.. + .....++.||.. .+++.+.
T Consensus 370 -~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~ 436 (711)
T 4hvt_A 370 -VVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIR 436 (711)
T ss_dssp -TEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEE
T ss_pred -CEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEe
Confidence 24568899988888743 22 2111111111 11 23444432 2 235688899988 7777765
No 320
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=54.27 E-value=69 Score=24.29 Aligned_cols=63 Identities=8% Similarity=-0.102 Sum_probs=34.4
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEe-ccCccceeeeeEEE-CCE-EEEEeCCCCCeEEEEeCCCCc
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQ-MKNGCVMVTAHAVV-GKK-LFCMEWKNQRKLTIFDPEDNS 132 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~-~~~-iyv~Gg~~~~~~~~yd~~~~~ 132 (202)
++++++-||.+ .++.++|..+..=.. +........++... ++. +++.|+ ..+.+.+||..+.+
T Consensus 155 d~~~las~s~D-------~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~-~d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 155 AEQVIASVGDD-------CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGE-RNGNIRIFDWTLNL 220 (393)
T ss_dssp EEEEEEEEETT-------SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEE-TTSEEEEEETTCCC
T ss_pred CCCEEEEEECC-------CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecC-CCCEEEEEECCCCc
Confidence 57777777643 468888876554211 11111122222333 443 444443 67888999987664
No 321
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=53.18 E-value=1e+02 Score=26.04 Aligned_cols=76 Identities=12% Similarity=0.156 Sum_probs=43.3
Q ss_pred EEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEE-CCeEEEEcccC-----C-CCceeEEEeCCCCCCCcc
Q 028925 111 KLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGIL-DGKLLLFSLEE-----E-PSYSTLLYDPNAASGSEW 183 (202)
Q Consensus 111 ~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~-~~~i~v~gG~~-----~-~~~~~~~yd~~~~~~~~W 183 (202)
.||+.-......+++=.-.-.+|+.+. ..+. ....+.++.. ++.+|+..+.. . ....+++++-... +|
T Consensus 212 ~v~~~~~~~~~~v~~S~DgG~tW~~~~-~~p~-~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~---tW 286 (737)
T 2cn3_A 212 TIYVGVADKNESIYRSTDGGVTWKAVP-GQPK-GLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTG---EW 286 (737)
T ss_dssp CEEEEESCSSCCEEEESSTTSCCEECT-TCCC-SSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTC---CE
T ss_pred EEEEEecCCCccEEEEcCCCCceEECC-CCCC-cccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCC---CE
Confidence 677753222223544444567899986 2222 1111222222 78899875432 1 3347888888888 99
Q ss_pred eeecccCC
Q 028925 184 QTSKIKPS 191 (202)
Q Consensus 184 ~~~~~~p~ 191 (202)
+++...|.
T Consensus 287 ~~i~~~~~ 294 (737)
T 2cn3_A 287 IDITPIPY 294 (737)
T ss_dssp EECCSSCT
T ss_pred EEccCCCC
Confidence 99866554
No 322
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=53.11 E-value=73 Score=24.25 Aligned_cols=156 Identities=8% Similarity=0.025 Sum_probs=80.1
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCC------CC-----CceeeeeEEE---CCEEEEEcCccCCCCCCcc
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESL------RR-----PRWGCFACSF---DGKLYVMGGRSSFTIGNSK 80 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~------~~-----~r~~~~~~~~---~~~iy~~gG~~~~~~~~~~ 80 (202)
+.||+.... ..+++.+-..++|+.+... |. ...-+.++.. .+.||+... .
T Consensus 190 ~~l~vg~~~-------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~---------~ 253 (394)
T 3b7f_A 190 KHLYIGMSS-------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH---------C 253 (394)
T ss_dssp TCEEEEEET-------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET---------T
T ss_pred CEEEEEECC-------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC---------C
Confidence 578876432 2478888788899987531 11 1112233332 256776421 3
Q ss_pred eEEEEeCCCCeEEeccC-ccc----eeeeeEE---ECCEEEEEeCC-----------CCCeEEEEeCCCCcEEEeccCCC
Q 028925 81 FVDVYNPERHTWCQMKN-GCV----MVTAHAV---VGKKLFCMEWK-----------NQRKLTIFDPEDNSWKMVPVPLT 141 (202)
Q Consensus 81 ~~~~yd~~~~~W~~~~~-~~~----~~~~~~~---~~~~iyv~Gg~-----------~~~~~~~yd~~~~~W~~~~~~~~ 141 (202)
.+++++-...+|+.+.+ .+. ......+ -.+.||+.... ....++.-.-...+|+.+....+
T Consensus 254 gl~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp 333 (394)
T 3b7f_A 254 GIYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLP 333 (394)
T ss_dssp EEEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSC
T ss_pred eEEEeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCC
Confidence 48888888899999863 222 1122222 24678886310 11233333333478999863222
Q ss_pred CCCC----CCeeEEE--EC-CeEEEEcccCCCCceeEEEeCCCCCCCcceee-cccCCce
Q 028925 142 GSSS----IGFRFGI--LD-GKLLLFSLEEEPSYSTLLYDPNAASGSEWQTS-KIKPSGL 193 (202)
Q Consensus 142 ~~~~----~~~~~~~--~~-~~i~v~gG~~~~~~~~~~yd~~~~~~~~W~~~-~~~p~~~ 193 (202)
.... ...++++ .+ +.||+.+ . ...+++-+-... +|+.+ ..+|...
T Consensus 334 ~~~~~~~~~~~~~~~~p~~~~~l~~g~-~---~g~l~~S~D~G~---tW~~~~~~lp~~~ 386 (394)
T 3b7f_A 334 TDQAWLTVKRQAMTADAHAPVGVYFGT-T---GGEIWASADEGE---HWQCIASHLPHIY 386 (394)
T ss_dssp CSSCCCCCCTBSEEECCSSSCCEEEEC-T---TSCEEEESSTTS---BCEEEECSCSCEE
T ss_pred CccccceEEEEEEEECCCCCCEEEEEe-C---CCeEEEECCCCC---CceEcccCCCCee
Confidence 2111 1123333 23 4577632 1 123555554455 89998 4566533
No 323
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=51.86 E-value=1e+02 Score=25.57 Aligned_cols=141 Identities=9% Similarity=0.001 Sum_probs=73.3
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcC-CCC-CCceeeeeE-EECCEEEEEcCccCCCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIE-SLR-RPRWGCFAC-SFDGKLYVMGGRSSFTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~-~~~-~~r~~~~~~-~~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~ 90 (202)
+|+..+.++.+ ..+.+||.++ .+.... .++ ..+..++++ .-+|++++.|+.+ .++.+||..++
T Consensus 96 dG~~LAs~s~d------g~V~iwd~~~-~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~D-------GtVkIWd~~~~ 161 (588)
T 2j04_A 96 IDDWMAVLSNN------GNVSVFKDNK-MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNED-------GELQFFSIRKN 161 (588)
T ss_dssp SSSCEEEEETT------SCEEEEETTE-EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETT-------SEEEEEECCCC
T ss_pred CCCEEEEEeCC------CcEEEEeCCc-eeeeccCCCccccccEEEEEEcCCCCEEEEEcCC-------CEEEEEECCCC
Confidence 66666666543 2466777443 333322 111 122333333 3478888787753 46889998876
Q ss_pred e--------EEecc----CccceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCc----EEEeccCCCCCCCCCeeEEEEC
Q 028925 91 T--------WCQMK----NGCVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNS----WKMVPVPLTGSSSIGFRFGILD 154 (202)
Q Consensus 91 ~--------W~~~~----~~~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~----W~~~~~~~~~~~~~~~~~~~~~ 154 (202)
. ...+. .......+.....+. ++.++ ..+.+..+|..++. |+.+. +... ..-..++..|
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass-~D~tVrlWd~~~~~~~~~~~tL~-~~h~--~~V~svaFsg 236 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAAL-SNNSVFSMTVSASSHQPVSRMIQ-NASR--RKITDLKIVD 236 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEE-TTCCEEEECCCSSSSCCCEEEEE-CCCS--SCCCCEEEET
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc-EEEEe-CCCeEEEEECCCCccccceeeec-cccc--CcEEEEEEEC
Confidence 3 23322 111122333344444 55554 57889999987766 34442 1111 1122223334
Q ss_pred CeEEEEcccCCCCceeEEEeCCCC
Q 028925 155 GKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 155 ~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
+.++.++. ..+..||..++
T Consensus 237 -~~LASa~~----~tIkLWd~~~~ 255 (588)
T 2j04_A 237 -YKVVLTCP----GYVHKIDLKNY 255 (588)
T ss_dssp -TEEEEECS----SEEEEEETTTT
T ss_pred -CEEEEEeC----CeEEEEECCCC
Confidence 55554442 37888888775
No 324
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=51.80 E-value=1.1e+02 Score=26.10 Aligned_cols=136 Identities=9% Similarity=0.094 Sum_probs=70.1
Q ss_pred CCCeEEcCCCCCCceeeeeEE-E-CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCcc-------ceeeeeEEE--
Q 028925 40 TDKWNLIESLRRPRWGCFACS-F-DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGC-------VMVTAHAVV-- 108 (202)
Q Consensus 40 t~~W~~~~~~~~~r~~~~~~~-~-~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~-------~~~~~~~~~-- 108 (202)
..+|+.+.+....|....+.. . .+.+|+. +. ...+++.+-...+|+.+.... ....+..+.
T Consensus 3 ~~~W~~~~~~~~g~i~~i~~~p~~~~~~~a~-~~-------~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~ 74 (789)
T 1sqj_A 3 HYEFKNVAIGGGGYITGIVAHPKTKDLLYAR-TD-------IGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPN 74 (789)
T ss_dssp -CEEEECCCCBCSCEEEEEECSSSTTCEEEE-ES-------SSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETT
T ss_pred cccceEccCCCCCcEEEEEECCCCCCEEEEE-ec-------CCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCC
Confidence 357999886434443322221 1 3456654 21 234777777788999987321 122333332
Q ss_pred -CCEEEEEeCCCC----CeEEEEeCCCCcEEEeccCCCC----CCC-CCeeEEEE---CCeEEEEcccCCCCceeEEEeC
Q 028925 109 -GKKLFCMEWKNQ----RKLTIFDPEDNSWKMVPVPLTG----SSS-IGFRFGIL---DGKLLLFSLEEEPSYSTLLYDP 175 (202)
Q Consensus 109 -~~~iyv~Gg~~~----~~~~~yd~~~~~W~~~~~~~~~----~~~-~~~~~~~~---~~~i~v~gG~~~~~~~~~~yd~ 175 (202)
.+.||+..|... ..+++=+-.-.+|+.+..+... ..+ ....+++. .+.+|+.. + ...+++=+-
T Consensus 75 ~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~---~~gl~~S~D 150 (789)
T 1sqj_A 75 NPDRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-R---TEGIWKSSD 150 (789)
T ss_dssp EEEEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-S---SSCEEEESS
T ss_pred CCCEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-c---cCCEEEECC
Confidence 256888765333 4566656667789998743221 112 11234443 35666632 1 123444333
Q ss_pred CCCCCCcceeecccC
Q 028925 176 NAASGSEWQTSKIKP 190 (202)
Q Consensus 176 ~~~~~~~W~~~~~~p 190 (202)
.-. +|+++..+|
T Consensus 151 gG~---TW~~~~~~~ 162 (789)
T 1sqj_A 151 RAK---TWTNVTSIP 162 (789)
T ss_dssp TTS---SCEEETTSC
T ss_pred CCc---ccCCCccCc
Confidence 334 899986544
No 325
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=51.34 E-value=75 Score=23.89 Aligned_cols=72 Identities=10% Similarity=0.156 Sum_probs=39.6
Q ss_pred CCEEEEEcC---ccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEE-E-CCEEEEEeCCCCCeEEEEeCCCCcEEEe
Q 028925 62 DGKLYVMGG---RSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAV-V-GKKLFCMEWKNQRKLTIFDPEDNSWKMV 136 (202)
Q Consensus 62 ~~~iy~~gG---~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~-~-~~~iyv~Gg~~~~~~~~yd~~~~~W~~~ 136 (202)
++++|+... ...........+.++|..+.+-...-+... ..+..+ . +..||+.+ . +.+.+||.++.+-+.+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n--~-~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLD--G-GNVNVYDISQPEPKLL 340 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEEC--S-SCEEEEECSSSSCEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeC--C-CeEEEEECCCCcceee
Confidence 477888643 111111124579999999886332212222 333322 2 34677654 3 8999999988732444
Q ss_pred c
Q 028925 137 P 137 (202)
Q Consensus 137 ~ 137 (202)
.
T Consensus 341 ~ 341 (361)
T 2oiz_A 341 R 341 (361)
T ss_dssp E
T ss_pred E
Confidence 3
No 326
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=51.28 E-value=92 Score=24.88 Aligned_cols=122 Identities=13% Similarity=0.171 Sum_probs=70.8
Q ss_pred CCCeEE--cCCCCCCceeeeeEEECCEEEEEcCccCCCCCCcceEE-EE-----eCCCC-eEEecc---CccceeeeeEE
Q 028925 40 TDKWNL--IESLRRPRWGCFACSFDGKLYVMGGRSSFTIGNSKFVD-VY-----NPERH-TWCQMK---NGCVMVTAHAV 107 (202)
Q Consensus 40 t~~W~~--~~~~~~~r~~~~~~~~~~~iy~~gG~~~~~~~~~~~~~-~y-----d~~~~-~W~~~~---~~~~~~~~~~~ 107 (202)
...|+. ++-.+..-.-|+.+.+++.=|.+|=..+.- ..+++- .| +.... .=+.++ .......+.-.
T Consensus 269 ~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv--~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvky 346 (670)
T 3ju4_A 269 KSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDV--APREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKY 346 (670)
T ss_dssp TSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSS--SSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEE
T ss_pred cCCceecccccccceeeeeeeeEecCCceEEEeccCCC--CcceeeEEEecccccCCcceeeeechhhhccccccchhhh
Confidence 445654 344455556788888888777886443221 122322 22 11111 122233 12223345567
Q ss_pred ECCEEEEEe-C---CC-CCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccC
Q 028925 108 VGKKLFCME-W---KN-QRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEE 164 (202)
Q Consensus 108 ~~~~iyv~G-g---~~-~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~ 164 (202)
+++.||+.- | .+ -..+.+-+.....|+.+..|.. -.....-++..++.||++|.+.
T Consensus 347 YdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~n-vHhtnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 347 YDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHN-VHHTTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp ETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTC-CCSSCCCEEEETTEEEEEEECS
T ss_pred hCCEEEEEecCcCCCCCcceeeeecccCCchhheecccc-ccccCCCcceeCCEEEEEeccc
Confidence 799999985 2 11 2467777888889999974422 2344556779999999999653
No 327
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=50.34 E-value=1.3e+02 Score=26.21 Aligned_cols=133 Identities=11% Similarity=0.042 Sum_probs=64.2
Q ss_pred eeeEEEeCCCCCeEEcCCCCCCceeeeeEE--ECCEEEEEcCccCCCCCCcceEEEEeCCCCeEEecc----------C-
Q 028925 31 SSAEVYDPDTDKWNLIESLRRPRWGCFACS--FDGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMK----------N- 97 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~--~~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~----------~- 97 (202)
..+.+||+.+.+-...-..+ . ...++. -+++.++.|+.+ ..+.+||..+.+-.... .
T Consensus 79 ~~v~lWd~~~~~~~~~~~~~-~--~V~~v~~sp~g~~l~sgs~d-------g~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 79 DTVYVLSLYSQKVLTTVFVP-G--KITSIDTDASLDWMLIGLQN-------GSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp CEEEEEETTTCSEEEEEECS-S--CEEEEECCTTCSEEEEEETT-------SCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred CeEEEEECCCCcEEEEEcCC-C--CEEEEEECCCCCEEEEEcCC-------CcEEEEECCCCccccceeccccccccccc
Confidence 35677777765532211111 1 112222 255666565432 46889998877643110 0
Q ss_pred -ccceeeeeEEEC--CEEEEEeCCCCCeEEEEeCCCCcEEEeccCC----CCCC----------CCCeeEEEE--CCeEE
Q 028925 98 -GCVMVTAHAVVG--KKLFCMEWKNQRKLTIFDPEDNSWKMVPVPL----TGSS----------SIGFRFGIL--DGKLL 158 (202)
Q Consensus 98 -~~~~~~~~~~~~--~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~----~~~~----------~~~~~~~~~--~~~i~ 158 (202)
......+..... +.+++.|+ ....+ +||..+.+-...-... .+.. ......+.+ +++.+
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~-~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~l 226 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISY-EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHI 226 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEEC-SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEE
T ss_pred cCCCCeEEEEEccCCCCEEEEEe-CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEE
Confidence 001112222222 34566664 56778 9999887644321110 0000 111222222 67777
Q ss_pred EEcccCCCCceeEEEeCCCC
Q 028925 159 LFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 159 v~gG~~~~~~~~~~yd~~~~ 178 (202)
+.|+.. ..+.+||..++
T Consensus 227 asgs~D---g~i~lWd~~~g 243 (902)
T 2oaj_A 227 ITIHED---NSLVFWDANSG 243 (902)
T ss_dssp EEEETT---CCEEEEETTTC
T ss_pred EEEECC---CeEEEEECCCC
Confidence 777543 26888888775
No 328
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=49.61 E-value=88 Score=26.22 Aligned_cols=113 Identities=6% Similarity=-0.028 Sum_probs=58.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCC-CCCceee----eeEEECCEEEEEcCccCCC--CCCcceEEEEe
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESL-RRPRWGC----FACSFDGKLYVMGGRSSFT--IGNSKFVDVYN 86 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~r~~~----~~~~~~~~iy~~gG~~~~~--~~~~~~~~~yd 86 (202)
++++++.+ + ..++.||+.+++=..+-.. ....... ...+-+|+..+++...... ......+++||
T Consensus 27 dg~~~~~~--~------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 27 DHEYLYKQ--E------NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp SSEEEEEE--T------TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CCcEEEEc--C------CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 55655554 2 3688999998875544111 1111111 1223477755665432110 01125688999
Q ss_pred CCCCeEEeccCccce-eeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEe
Q 028925 87 PERHTWCQMKNGCVM-VTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMV 136 (202)
Q Consensus 87 ~~~~~W~~~~~~~~~-~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~ 136 (202)
..+++-..+...+.. .......+++.+++. ..+.+++.|..+..-..+
T Consensus 99 ~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 99 LNKRQLITEERIPNNTQWVTWSPVGHKLAYV--WNNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp TTTTEECCSSCCCTTEEEEEECSSTTCEEEE--ETTEEEEESSTTSCCEEC
T ss_pred CCCCcEEEcccCCCcceeeEECCCCCEEEEE--ECCeEEEEECCCCceEEE
Confidence 999987776532221 222233355433443 245677777766654444
No 329
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=47.41 E-value=84 Score=23.30 Aligned_cols=117 Identities=8% Similarity=0.026 Sum_probs=61.5
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCC----CCCceeeeeEEE--CCEEEEEcCccCCCCCCcceEEEEeC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESL----RRPRWGCFACSF--DGKLYVMGGRSSFTIGNSKFVDVYNP 87 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~----~~~r~~~~~~~~--~~~iy~~gG~~~~~~~~~~~~~~yd~ 87 (202)
+++||+.......+. ..++.+| +.+-...+.. ...........+ +++||++.-... ......+.+||+
T Consensus 27 ~g~~~v~~~~~~~~~--~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~--~~~~~~i~~~d~ 100 (343)
T 2qe8_A 27 DGRLFLSLHQFYQPE--MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ--SKSVPKLVAWDT 100 (343)
T ss_dssp TSCEEEEECGGGCCS--CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH--HTSCCEEEEEET
T ss_pred CCCEEEEeCCCCCCc--eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC--cCCCCeEEEEEC
Confidence 689999853221111 4577777 4443333221 111222333333 588999752110 001347999999
Q ss_pred CCCeEE-ecc-Cc----c-ceeeeeEEE--CCEEEEEeCC--CCCeEEEEeCCCCc-EEEe
Q 028925 88 ERHTWC-QMK-NG----C-VMVTAHAVV--GKKLFCMEWK--NQRKLTIFDPEDNS-WKMV 136 (202)
Q Consensus 88 ~~~~W~-~~~-~~----~-~~~~~~~~~--~~~iyv~Gg~--~~~~~~~yd~~~~~-W~~~ 136 (202)
.+++-. .+. +. + ......++. ++.+|+.... ....+.+||+.+.+ |+.+
T Consensus 101 ~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 101 LNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp TTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred CCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 988733 332 11 1 111233333 4789998531 35688999998665 5544
No 330
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=41.54 E-value=2e+02 Score=26.02 Aligned_cols=153 Identities=8% Similarity=0.064 Sum_probs=80.7
Q ss_pred eeeEEEeCCCCCeEEcCC--CCCC-c-eeeeeEEEC---CEEEEEcCcc-C--CCCCCcceEEEEeCCCCeEEecc--Cc
Q 028925 31 SSAEVYDPDTDKWNLIES--LRRP-R-WGCFACSFD---GKLYVMGGRS-S--FTIGNSKFVDVYNPERHTWCQMK--NG 98 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~--~~~~-r-~~~~~~~~~---~~iy~~gG~~-~--~~~~~~~~~~~yd~~~~~W~~~~--~~ 98 (202)
..+..+|+. +|+.+.. |... . .....+.+. ...+++|-.- . +.......+++|+....+.+.+. +.
T Consensus 807 s~i~lidp~--t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v 884 (1158)
T 3ei3_A 807 HNLLIIDQH--TFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEV 884 (1158)
T ss_dssp EEEEEEETT--TCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEeCC--CCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEc
Confidence 457778886 4665432 2221 1 111222232 2456665321 1 11113457888887666666554 22
Q ss_pred cceeeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEeCCCC
Q 028925 99 CVMVTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYDPNAA 178 (202)
Q Consensus 99 ~~~~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd~~~~ 178 (202)
.....+...++|+|.+. ..+.+.+|+...++--++.....+. -....+...++.|+| |....+-.+..|+++.+
T Consensus 885 ~g~v~al~~~~g~Lla~---ig~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~~~~~~I~v--gD~~~Sv~~~~y~~~~~ 958 (1158)
T 3ei3_A 885 KGAVYSMVEFNGKLLAS---INSTVRLYEWTTEKELRTECNHYNN-IMALYLKTKGDFILV--GDLMRSVLLLAYKPMEG 958 (1158)
T ss_dssp SSCEEEEEEETTEEEEE---ETTEEEEEEECTTSCEEEEEEECCC-SCEEEEEEETTEEEE--EESSBCEEEEEEETTTT
T ss_pred CCcCEEEeeeCCEEEEE---cCCEEEEEECCCCceEEEEeecccc-EEEEEEeccCCEEEE--EEhhheEEEEEEEcCCC
Confidence 33345567788887765 3567888988766533322111110 111133356787776 55555667788888877
Q ss_pred CCCcceeecccCCcee
Q 028925 179 SGSEWQTSKIKPSGLC 194 (202)
Q Consensus 179 ~~~~W~~~~~~p~~~~ 194 (202)
+-..+..=..++.
T Consensus 959 ---~L~~~a~D~~~~~ 971 (1158)
T 3ei3_A 959 ---NFEEIARDFNPNW 971 (1158)
T ss_dssp ---EEEEEEECCSCBC
T ss_pred ---eEEEEEeeccccc
Confidence 7776644333443
No 331
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=41.45 E-value=1.2e+02 Score=23.28 Aligned_cols=69 Identities=13% Similarity=-0.091 Sum_probs=39.6
Q ss_pred CCEEEEEcCccCCCCCCcceEEEEeCCCCeEEeccCccceeeeeEEE-CCEEEEEe--------CCCCCeEEEEeCCCCc
Q 028925 62 DGKLYVMGGRSSFTIGNSKFVDVYNPERHTWCQMKNGCVMVTAHAVV-GKKLFCME--------WKNQRKLTIFDPEDNS 132 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~iyv~G--------g~~~~~~~~yd~~~~~ 132 (202)
..++|+.....+.- ..++.++|+.+++-...-+.....+-.... +..+|+.. |...+.+..+|+.+.+
T Consensus 31 ~~~~yV~~~~~~~~---~d~vsvID~~t~~v~~~i~vG~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 31 SRRSHITLPAYFAG---TTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp TTEEEEEECTTTCS---SEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCeEEEECCccCCc---cceEEEEECCCCeEEEEEeCCCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 35678775432211 117889999887644332222222222222 55799885 2235789999999887
Q ss_pred E
Q 028925 133 W 133 (202)
Q Consensus 133 W 133 (202)
=
T Consensus 108 v 108 (368)
T 1mda_H 108 P 108 (368)
T ss_dssp E
T ss_pred E
Confidence 4
No 332
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=39.44 E-value=1.8e+02 Score=24.86 Aligned_cols=75 Identities=16% Similarity=0.305 Sum_probs=42.8
Q ss_pred CCEEEEEeC-------CCCCeEEEEeCCCCcEEEeccCCCCCC--------CC---C-eeEEEE---CCeEEEEcccCCC
Q 028925 109 GKKLFCMEW-------KNQRKLTIFDPEDNSWKMVPVPLTGSS--------SI---G-FRFGIL---DGKLLLFSLEEEP 166 (202)
Q Consensus 109 ~~~iyv~Gg-------~~~~~~~~yd~~~~~W~~~~~~~~~~~--------~~---~-~~~~~~---~~~i~v~gG~~~~ 166 (202)
++.||+..+ .....+++.+-...+|+.+.. .+... .. + ..+++. .+.||+.+....+
T Consensus 241 ~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~-~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~ 319 (789)
T 1sqj_A 241 PNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITP-RVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDP 319 (789)
T ss_dssp SSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCC-CTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCS
T ss_pred CCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcC-CCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCC
Confidence 788998732 145678888888999999863 22100 11 2 244443 3578887643211
Q ss_pred C---ceeEEEeCCCCCCCcceeec
Q 028925 167 S---YSTLLYDPNAASGSEWQTSK 187 (202)
Q Consensus 167 ~---~~~~~yd~~~~~~~~W~~~~ 187 (202)
. ..+++=+-... +|+.+.
T Consensus 320 ~~~~~~l~~S~DgG~---tW~~~~ 340 (789)
T 1sqj_A 320 GPALDSIYLSTDAGA---TWKDVT 340 (789)
T ss_dssp CSSCCCEEEESSTTS---SEEEHH
T ss_pred CcccccEEEecCCCC---CceeCc
Confidence 1 23444333344 899876
No 333
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=38.92 E-value=1.8e+02 Score=24.72 Aligned_cols=29 Identities=17% Similarity=0.390 Sum_probs=22.3
Q ss_pred CCEEEEEeC-------CCCCeEEEEeCCCCcEEEec
Q 028925 109 GKKLFCMEW-------KNQRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 109 ~~~iyv~Gg-------~~~~~~~~yd~~~~~W~~~~ 137 (202)
++.+|+... .....+++.+-...+|+.+.
T Consensus 256 ~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~ 291 (763)
T 3a0f_A 256 NGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHIT 291 (763)
T ss_dssp TSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECC
T ss_pred CCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECC
Confidence 678888742 13567888888999999986
No 334
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=38.39 E-value=1.2e+02 Score=22.50 Aligned_cols=62 Identities=8% Similarity=0.131 Sum_probs=35.1
Q ss_pred CCEEEEEcCccCCCCCCcce-EEEEeCCCCeEEe-ccC--ccceeeee-EEECCEEEEEeCCCCCeEEEEeCCCC
Q 028925 62 DGKLYVMGGRSSFTIGNSKF-VDVYNPERHTWCQ-MKN--GCVMVTAH-AVVGKKLFCMEWKNQRKLTIFDPEDN 131 (202)
Q Consensus 62 ~~~iy~~gG~~~~~~~~~~~-~~~yd~~~~~W~~-~~~--~~~~~~~~-~~~~~~iyv~Gg~~~~~~~~yd~~~~ 131 (202)
++++++.|+.+ .. +.+||..+.+-.. +.. ......+. ...+++.++.++ ..+.+.+||....
T Consensus 206 ~g~~l~s~s~d-------~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s-~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQD-------GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVS-DKWTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETT-------CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEE-TTCEEEEEESSCC
T ss_pred CCCEEEEEeCC-------CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEE-CCCEEEEEEccCC
Confidence 67777666543 45 8889988765322 111 12122222 223566666664 5678889987654
No 335
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=37.17 E-value=1.4e+02 Score=22.94 Aligned_cols=148 Identities=11% Similarity=-0.028 Sum_probs=70.4
Q ss_pred CEEEEEcCcCCCCCceeeeEEEeCCCCCeEE-cCCC--CCCceeeeeEEECCEEEEEcCccC-----CCCCCcceEEEEe
Q 028925 15 GKIYAVGGYGMDGESLSSAEVYDPDTDKWNL-IESL--RRPRWGCFACSFDGKLYVMGGRSS-----FTIGNSKFVDVYN 86 (202)
Q Consensus 15 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~~~~--~~~r~~~~~~~~~~~iy~~gG~~~-----~~~~~~~~~~~yd 86 (202)
+.+++-|+.+ +.+.++|+++++-.. +..- ......+.+..-++++++.+.... .+.....++..+|
T Consensus 193 ~~~LaSgS~D------~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd 266 (356)
T 2w18_A 193 QEALLGTTIM------NNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVIN 266 (356)
T ss_dssp TTEEEEEETT------SEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEE
T ss_pred CceEEEecCC------CcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEE
Confidence 3555555543 468889999887532 2211 111111223345788776544311 0111345778889
Q ss_pred CCCCeEEecc----Cccce-eeeeEEECCEEEEEeCCCCCeEEEEeCCCCcEEE-eccCCCCCCCCCeeEE-EECCeEEE
Q 028925 87 PERHTWCQMK----NGCVM-VTAHAVVGKKLFCMEWKNQRKLTIFDPEDNSWKM-VPVPLTGSSSIGFRFG-ILDGKLLL 159 (202)
Q Consensus 87 ~~~~~W~~~~----~~~~~-~~~~~~~~~~iyv~Gg~~~~~~~~yd~~~~~W~~-~~~~~~~~~~~~~~~~-~~~~~i~v 159 (202)
+.+.+-...- |.... ........+.+.+.| ...+.+.++|..+.+-.. +. .... .....++ .-+++.++
T Consensus 267 ~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASg-S~DgTIkIWDl~tGk~l~tL~-gH~~--~vvs~vafSPDG~~La 342 (356)
T 2w18_A 267 PKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAI-LTSGTIAIWDLLLGQCTALLP-PVSD--QHWSFVKWSGTDSHLL 342 (356)
T ss_dssp TTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEE-ETTSCEEEEETTTCSEEEEEC-CC----CCCCEEEECSSSSEEE
T ss_pred CCCCEEEEEEEeeccCCCcceeEccccCCCEEEEE-cCCCcEEEEECCCCcEEEEec-CCCC--CeEEEEEECCCCCEEE
Confidence 9877643221 11110 000111113344444 356789999999887544 32 1111 1111122 23677777
Q ss_pred EcccCCCCceeEEEeC
Q 028925 160 FSLEEEPSYSTLLYDP 175 (202)
Q Consensus 160 ~gG~~~~~~~~~~yd~ 175 (202)
.|+.. ..+.+||.
T Consensus 343 SGS~D---~TIklWd~ 355 (356)
T 2w18_A 343 AGQKD---GNIFVYHY 355 (356)
T ss_dssp EECTT---SCEEEEEE
T ss_pred EEECC---CcEEEecC
Confidence 77532 25666664
No 336
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=36.16 E-value=1.2e+02 Score=21.96 Aligned_cols=128 Identities=11% Similarity=0.105 Sum_probs=60.1
Q ss_pred eeeeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEcCccCC-CCCCcceEEEEeCCCCeEEeccCc-cceeee-eE
Q 028925 30 LSSAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMGGRSSF-TIGNSKFVDVYNPERHTWCQMKNG-CVMVTA-HA 106 (202)
Q Consensus 30 ~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~gG~~~~-~~~~~~~~~~yd~~~~~W~~~~~~-~~~~~~-~~ 106 (202)
...++.+| +++++.+..- .......-+|+.+++.+.... .......++++| +.++..+.+. ...... ..
T Consensus 199 ~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~ 270 (347)
T 2gop_A 199 FWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKI 270 (347)
T ss_dssp CEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEE
T ss_pred cccEEEeC--CCceEEeccC----cceeeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccE
Confidence 45788898 6677666432 111222556664444332221 111235789998 6666666532 222222 22
Q ss_pred EECCEEEEEeCC-CCCeEEEEeCCCCcEEEeccCCCCCCCCCeeEEEECCeEEEEcccCCCCceeEEEe
Q 028925 107 VVGKKLFCMEWK-NQRKLTIFDPEDNSWKMVPVPLTGSSSIGFRFGILDGKLLLFSLEEEPSYSTLLYD 174 (202)
Q Consensus 107 ~~~~~iyv~Gg~-~~~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~~~i~v~gG~~~~~~~~~~yd 174 (202)
..++ +|+.+.. ....++ ++ +.+...+. +. . ..-..+.... ++++..........++.+|
T Consensus 271 ~sdg-~~~~~~~~~~~~l~-~~--~g~~~~~~-~~-~--~~v~~~~~s~-~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 271 KDGK-VYFTLFEEGSVNLY-IW--DGEIKPIA-KG-R--HWIMGFDVDE-IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp ETTE-EEEEEEETTEEEEE-EE--SSSEEEEE-CS-S--SEEEEEEESS-SEEEEEECSSSCCEEEEES
T ss_pred EcCc-EEEEEecCCcEEEE-Ec--CCceEEEe-cC-C--CeEEeeeeeC-cEEEEEcCCCChHHheEeC
Confidence 2244 6666532 223455 56 34444442 11 1 1112233334 6666554333333677777
No 337
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=35.60 E-value=1.5e+02 Score=22.77 Aligned_cols=53 Identities=9% Similarity=0.120 Sum_probs=32.1
Q ss_pred CCEEEEEeCCCCCeEEEEeCCC--CcEEEeccCCCCCCCCCeeEEEEC---CeEEEEcccC
Q 028925 109 GKKLFCMEWKNQRKLTIFDPED--NSWKMVPVPLTGSSSIGFRFGILD---GKLLLFSLEE 164 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~--~~W~~~~~~~~~~~~~~~~~~~~~---~~i~v~gG~~ 164 (202)
+++|++.++ ....+++-+-.. ++|+....+.. ..+.-.+...+ +.|+|+|+..
T Consensus 287 ~g~l~~s~~-~~~~v~~~~~~g~~~~W~~~~~~~~--~~Ys~~l~~~~~~~~~l~~~~~~~ 344 (367)
T 2ydt_A 287 NGTIVVSCG-TRSEIFTNQALGDASAWKKWDVPQP--TAYTRSLLTFQKDPDLLMIMGAGI 344 (367)
T ss_dssp TCEEEEECS-SCSCEEEESSTTCTTCCEEECCSSC--CCTTCEEEEETTEEEEEEEEECCC
T ss_pred CCeEEEEcC-CCceEEEECCCCCCCcceeccCCCC--CCCCcceEecCCCCCEEEEecCcc
Confidence 578888875 344555443333 48999975432 24444455653 3788888644
No 338
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=32.89 E-value=1.9e+02 Score=23.17 Aligned_cols=108 Identities=14% Similarity=0.062 Sum_probs=55.2
Q ss_pred CEEEEEcCccCCCCCCcceEEEEeCCCC----eEEecc-------C-c-cceeeeeEEECCEEEEEe-----CCCCCeEE
Q 028925 63 GKLYVMGGRSSFTIGNSKFVDVYNPERH----TWCQMK-------N-G-CVMVTAHAVVGKKLFCME-----WKNQRKLT 124 (202)
Q Consensus 63 ~~iy~~gG~~~~~~~~~~~~~~yd~~~~----~W~~~~-------~-~-~~~~~~~~~~~~~iyv~G-----g~~~~~~~ 124 (202)
.++|+-|.. ...++++|..++ +-.+.- + . .+.++.++..++ |||.. |...+.+.
T Consensus 96 ~~l~v~~l~-------s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 96 RFLIVPGLR-------SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CEEEEEBTT-------TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred CEEEEccCC-------CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 446655543 357999998776 332221 0 1 122233444566 77752 23357899
Q ss_pred EEeCCCCcEEEeccCCCCCCCCCeeEE-EECCeEEEEcc----------cC------CCCceeEEEeCCCC
Q 028925 125 IFDPEDNSWKMVPVPLTGSSSIGFRFG-ILDGKLLLFSL----------EE------EPSYSTLLYDPNAA 178 (202)
Q Consensus 125 ~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~~~i~v~gG----------~~------~~~~~~~~yd~~~~ 178 (202)
.+|.++.+-...-.........++.+- ..++++++..- +. ..++.+.+||.+++
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~ 238 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR 238 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC
Confidence 999997764433211111112222221 23444544431 11 22568999999875
No 339
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=30.98 E-value=1.3e+02 Score=23.07 Aligned_cols=16 Identities=19% Similarity=0.357 Sum_probs=11.0
Q ss_pred ceEEEEE-CCEEEEEcC
Q 028925 7 DFACAEV-NGKIYAVGG 22 (202)
Q Consensus 7 ~~~~~~~-~~~iyv~GG 22 (202)
.|+++.. +++||.+|-
T Consensus 235 ~ht~~l~~~G~v~~wG~ 251 (406)
T 4d9s_A 235 RHTISVSYSGALYTYGW 251 (406)
T ss_dssp SEEEEEETTCCEEEEEC
T ss_pred CcEEEEcCCCCEEEeeC
Confidence 4555544 789999983
No 340
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=29.95 E-value=93 Score=20.10 Aligned_cols=18 Identities=11% Similarity=0.237 Sum_probs=15.5
Q ss_pred eeeEEEeCCCCCeEEcCC
Q 028925 31 SSAEVYDPDTDKWNLIES 48 (202)
Q Consensus 31 ~~~~~yd~~t~~W~~~~~ 48 (202)
-.|..||+.+++|.+...
T Consensus 18 A~Vm~~Dd~tk~WlP~gg 35 (130)
T 3syx_A 18 AVVMTRDDSSGGWLPLGG 35 (130)
T ss_dssp EEEEEECSSSSCEEESSS
T ss_pred EEeeeEcCCCCceEeCCC
Confidence 468899999999999864
No 341
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=28.15 E-value=1.8e+02 Score=21.50 Aligned_cols=24 Identities=13% Similarity=0.123 Sum_probs=14.6
Q ss_pred CCEEEEEeCCCCCeEEEEeCCCCcE
Q 028925 109 GKKLFCMEWKNQRKLTIFDPEDNSW 133 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~~~W 133 (202)
++.||+.+ ...+.+.+|+.+.++-
T Consensus 321 g~~l~v~~-~~~~~v~v~~~~~~~l 344 (365)
T 1jof_A 321 DEWMAITD-DQEGWLEIYRWKDEFL 344 (365)
T ss_dssp TTEEEEEC-SSSCEEEEEEEETTEE
T ss_pred CCEEEEEE-cCCCeEEEEEEchhhC
Confidence 44566654 2457788887766543
No 342
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=27.97 E-value=2e+02 Score=21.94 Aligned_cols=113 Identities=5% Similarity=-0.107 Sum_probs=56.9
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEcCCCCCCceeeeeEEE-CCEEEEEcCccC--CCCCCcceEEEEeCCCC
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLIESLRRPRWGCFACSF-DGKLYVMGGRSS--FTIGNSKFVDVYNPERH 90 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~iy~~gG~~~--~~~~~~~~~~~yd~~~~ 90 (202)
..++||.-... ......+.++|+.+++-. ..++....-+.+..- +.++|+...... ........+.++|+.+.
T Consensus 31 ~~~~yV~~~~~--~~~~d~vsvID~~t~~v~--~~i~vG~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 31 SRRSHITLPAY--FAGTTENWVSCAGCGVTL--GHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp TTEEEEEECTT--TCSSEEEEEEETTTTEEE--EEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred CCeEEEECCcc--CCccceEEEEECCCCeEE--EEEeCCCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 36889985321 111227899999876543 222222222333333 446888742100 00012457999999987
Q ss_pred eEEec-c-C-ccc------eeeeeEEEC-CEEEEEeCCCCCeEEE--EeCCC
Q 028925 91 TWCQM-K-N-GCV------MVTAHAVVG-KKLFCMEWKNQRKLTI--FDPED 130 (202)
Q Consensus 91 ~W~~~-~-~-~~~------~~~~~~~~~-~~iyv~Gg~~~~~~~~--yd~~~ 130 (202)
+=..- + + .++ .+..+...+ ..+|+..-...+.+.+ +|+.+
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 63321 1 1 111 112222334 4688874223456777 89887
No 343
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=27.35 E-value=2.6e+02 Score=22.95 Aligned_cols=31 Identities=13% Similarity=-0.001 Sum_probs=19.0
Q ss_pred CCEEEEEcCcCCCCCceeeeEEEeCCCCCeEEc
Q 028925 14 NGKIYAVGGYGMDGESLSSAEVYDPDTDKWNLI 46 (202)
Q Consensus 14 ~~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~ 46 (202)
+++++++.... ......++++|+.+.+...+
T Consensus 265 Dg~~l~~~~~~--~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 265 STKVAVTWLNR--AQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp SSEEEEEEEET--TSCEEEEEEEETTTCCEEEE
T ss_pred CCeEEEEEEcC--CCCeEEEEEEeCCCCcceEE
Confidence 67765554221 12345789999998876544
No 344
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=26.81 E-value=1.3e+02 Score=19.42 Aligned_cols=18 Identities=17% Similarity=0.488 Sum_probs=15.0
Q ss_pred CCeEEEEeCCCCcEEEec
Q 028925 120 QRKLTIFDPEDNSWKMVP 137 (202)
Q Consensus 120 ~~~~~~yd~~~~~W~~~~ 137 (202)
.-.++.||..++.|++..
T Consensus 37 ~v~vY~f~~~~~~W~K~~ 54 (134)
T 2lyd_A 37 HVAFYTFNSSQNEWEKTD 54 (134)
T ss_dssp EEEEEEEETTTTEEEEEE
T ss_pred eEEEEEecCCcCceeEcC
Confidence 456788999999999975
No 345
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=26.62 E-value=1.3e+02 Score=22.87 Aligned_cols=53 Identities=19% Similarity=0.250 Sum_probs=32.1
Q ss_pred CCEEEEEeCCCCCeEEEEeCCC-CcEEEeccCCCCCCCCCeeEEEE---CC-eEEEEcccC
Q 028925 109 GKKLFCMEWKNQRKLTIFDPED-NSWKMVPVPLTGSSSIGFRFGIL---DG-KLLLFSLEE 164 (202)
Q Consensus 109 ~~~iyv~Gg~~~~~~~~yd~~~-~~W~~~~~~~~~~~~~~~~~~~~---~~-~i~v~gG~~ 164 (202)
+++|++.++ ....+++-.-.. .+|+....+.. ..+.-.+... ++ .++++|+..
T Consensus 279 ~g~ll~s~~-~~~~v~~s~~~g~~~W~~~~~~~~--~~Ys~~l~~~~~~~~~~~~~~~~~~ 336 (355)
T 3a72_A 279 NGTIIVSSG-TQGTLFINKALGEGEWTEIPCPEE--HGYTRALRVLSEDGGRYLVVNSAGV 336 (355)
T ss_dssp TCEEEEECS-SCSSEEEESSTTCSCBEEECCSSC--CCTTCEEEECSHHHHCEEEEEECCC
T ss_pred CCeEEEEcC-CCcEEEEECCCCCCCCeECCCCCC--CCCChhheeeccCCceEEEEecccc
Confidence 468888875 445555544434 89999974433 3444446666 24 777777643
No 346
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=26.43 E-value=2.9e+02 Score=23.28 Aligned_cols=101 Identities=10% Similarity=0.145 Sum_probs=53.6
Q ss_pred EEEEeCCCCeEEeccCccce--eeeeEEE-CCEEEEEeCC--------CCCeEEEEeCCCCcEEEeccCCCC---CCCCC
Q 028925 82 VDVYNPERHTWCQMKNGCVM--VTAHAVV-GKKLFCMEWK--------NQRKLTIFDPEDNSWKMVPVPLTG---SSSIG 147 (202)
Q Consensus 82 ~~~yd~~~~~W~~~~~~~~~--~~~~~~~-~~~iyv~Gg~--------~~~~~~~yd~~~~~W~~~~~~~~~---~~~~~ 147 (202)
+++-.-.-.+|+.+...+.. .+..++. ++.+|+..+. ....+++++....+|+.+.. .+. ..+.+
T Consensus 224 v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~-~~~~~~~~~~~ 302 (737)
T 2cn3_A 224 IYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITP-IPYSSSDNRFC 302 (737)
T ss_dssp EEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCS-SCTTSTTCCSE
T ss_pred EEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccC-CCCCCcccccc
Confidence 44433345689998733321 1222222 7789987531 34578999999999999873 222 12233
Q ss_pred ee-EEEE---CCeEEEEcccCC-CCceeEEEeCCCCCCCcceee
Q 028925 148 FR-FGIL---DGKLLLFSLEEE-PSYSTLLYDPNAASGSEWQTS 186 (202)
Q Consensus 148 ~~-~~~~---~~~i~v~gG~~~-~~~~~~~yd~~~~~~~~W~~~ 186 (202)
+. +++. .+.||+.+.... ....+++-.-.-. +|+.+
T Consensus 303 ~~~i~v~p~~~~~ly~~~~~~~~~~~~l~~S~DgG~---tW~~~ 343 (737)
T 2cn3_A 303 FAGLAVDRQNPDIIMVTSMNAWWPDEYIFRSTDGGA---TWKNI 343 (737)
T ss_dssp EEEEEECTTCTTCEEEEEECCCSSCCCEEEESSTTS---SCEES
T ss_pred cccEEEcCCCCCEEEEEecccCCCCccEEEeCCCCc---cccch
Confidence 33 3332 367888764311 1112333222233 78877
No 347
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=25.85 E-value=1.1e+02 Score=18.30 Aligned_cols=36 Identities=11% Similarity=-0.100 Sum_probs=22.6
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEE
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVM 68 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~ 68 (202)
.-+.||+.+.+....|.. .+.....+...+|.||+.
T Consensus 64 Hg~~Fdl~~G~~~~~P~~-~~L~~~~v~~~~g~v~v~ 99 (106)
T 3dqy_A 64 HFGKFCVRTGKVKALPAC-KPIKVFPIKVEGDEVHVD 99 (106)
T ss_dssp TCCEEETTTCCEEETTCC-SCCCEECEEEETTEEEEC
T ss_pred CCCEEeCCCCCEeCCCCC-CCccEEEEEEECCEEEEE
Confidence 347899888888776542 222233344568888874
No 348
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=24.77 E-value=1.3e+02 Score=18.67 Aligned_cols=37 Identities=11% Similarity=0.016 Sum_probs=23.0
Q ss_pred eeEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEc
Q 028925 32 SAEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMG 69 (202)
Q Consensus 32 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~g 69 (202)
.-++||+.+.+-...|... +.....+...+|.||+.-
T Consensus 75 Hg~~Fdl~tG~~~~~P~~~-~L~~~~v~v~~g~V~v~~ 111 (121)
T 3gce_A 75 HVGRFDVRTGAPTALPCVL-PVRAYDVVVDGTEILVAP 111 (121)
T ss_dssp TCCEEETTTCCEEETTCCS-CCCBCCEEEETTEEEECC
T ss_pred CCCEEcCCCccEeCCCCcC-CcceEEEEEECCEEEEEE
Confidence 4577998888877665432 222233445688898853
No 349
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=23.72 E-value=57 Score=20.68 Aligned_cols=18 Identities=22% Similarity=0.420 Sum_probs=14.8
Q ss_pred eeeEEEeCCCC-CeEEcCC
Q 028925 31 SSAEVYDPDTD-KWNLIES 48 (202)
Q Consensus 31 ~~~~~yd~~t~-~W~~~~~ 48 (202)
-+++.||+.++ .|.+...
T Consensus 11 A~V~~~D~~tk~~W~p~g~ 29 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSK 29 (120)
T ss_dssp EEEEEECTTTSCSEEESCS
T ss_pred EEEEEEcCCCCCceEeCCC
Confidence 47899999996 9988654
No 350
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=21.37 E-value=1.5e+02 Score=18.14 Aligned_cols=36 Identities=17% Similarity=0.058 Sum_probs=21.1
Q ss_pred eEEEeCCCCCeEEcCCCCCCceeeeeEEECCEEEEEc
Q 028925 33 AEVYDPDTDKWNLIESLRRPRWGCFACSFDGKLYVMG 69 (202)
Q Consensus 33 ~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~iy~~g 69 (202)
-|.||+.+.+-...|... +.....+...+|.||+.-
T Consensus 69 g~~Fdl~tG~~~~~P~~~-~L~~~~v~~~~g~V~v~~ 104 (115)
T 2de6_D 69 GGAFNVCTGMPASSPCTV-PLGVFEVEVKEGEVYVAG 104 (115)
T ss_dssp CCEEETTTCCEEETTCCS-CCCEEEEEESSSEEEEEE
T ss_pred CCEEcCCCcCEeCCCCcC-CCCEEEEEEECCEEEEec
Confidence 467898888877665422 222223334578888754
Done!