Query 028928
Match_columns 201
No_of_seqs 115 out of 1109
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 04:45:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028928.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028928hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1272 Predicted membrane pro 100.0 1E-37 2.2E-42 264.8 15.5 162 29-196 15-215 (226)
2 PRK15087 hemolysin; Provisiona 100.0 8.5E-37 1.8E-41 258.5 18.4 163 29-197 10-209 (219)
3 TIGR01065 hlyIII channel prote 100.0 2.2E-31 4.7E-36 222.9 17.5 158 34-197 1-197 (204)
4 KOG4243 Macrophage maturation- 99.9 8.6E-25 1.9E-29 184.7 4.5 159 30-196 81-280 (298)
5 PF03006 HlyIII: Haemolysin-II 99.9 9E-22 1.9E-26 163.9 14.0 160 31-196 2-221 (222)
6 PF05875 Ceramidase: Ceramidas 99.3 5E-11 1.1E-15 103.0 14.2 180 18-200 7-234 (262)
7 KOG0748 Predicted membrane pro 99.0 9.2E-09 2E-13 90.7 13.3 161 32-198 47-264 (286)
8 KOG2329 Alkaline ceramidase [L 98.3 6.7E-07 1.5E-11 78.0 3.9 175 19-198 16-236 (276)
9 PF12036 DUF3522: Protein of u 95.9 0.057 1.2E-06 44.8 8.5 147 35-187 8-186 (186)
10 KOG2970 Predicted membrane pro 83.5 17 0.00037 32.7 10.5 57 36-95 112-174 (319)
11 PF04080 Per1: Per1-like ; In 60.9 1.2E+02 0.0026 26.8 12.4 34 59-95 89-122 (267)
12 COG5237 PER1 Predicted membran 55.9 81 0.0018 28.0 8.1 58 35-95 108-170 (319)
13 PF13965 SID-1_RNA_chan: dsRNA 50.9 27 0.00059 34.0 4.9 25 57-81 314-338 (570)
14 COG5500 Predicted integral mem 31.1 60 0.0013 25.9 3.2 46 125-175 55-101 (159)
15 KOG2736 Presenilin [Signal tra 22.0 3.5E+02 0.0076 25.3 6.8 121 30-175 60-199 (406)
16 PF04193 PQ-loop: PQ loop repe 21.1 2.4E+02 0.0052 18.1 4.4 39 137-175 13-54 (61)
No 1
>COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only]
Probab=100.00 E-value=1e-37 Score=264.76 Aligned_cols=162 Identities=24% Similarity=0.288 Sum_probs=144.8
Q ss_pred CCCchhhHHHHHhHHHHHHHh----------c---CCchhHHHHHHHHHHHHHHHHHHhhhhccch--hHHHHHHHhhhh
Q 028928 29 DLHLLERVANVLTSLPFIALG----------L---QTPRKNLNMTLYANSLVGVGVTSSLYHSSRG--KLRKYLRWADYA 93 (201)
Q Consensus 29 ~~~~~ee~~N~~TH~i~li~~----------~---~~~~~~~~~~vy~~sli~l~~~StlYH~~~~--~~k~~~r~lDH~ 93 (201)
.++..||.+|++||+++.++. + .++.+.++..+|+.|++.+|++||+||+.++ |.|+++||+||+
T Consensus 15 ~~~~~~e~~n~~tHlvGail~i~~l~~l~~~a~~~~~~~~~~~~~iy~~sl~~l~~~St~YH~~~~~~~~k~~~rk~DH~ 94 (226)
T COG1272 15 SYSWHEEIANAITHLIGAILAIVGLVLLLVYALITGSALAVIVFSIYGLSLFLLFLVSTLYHSIPNGQKAKAILRKFDHS 94 (226)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhHhhhhhHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHccHH
Confidence 678889999999999964321 1 5678899999999999999999999999984 999999999999
Q ss_pred hh----h--hhHHHHHhhcCCchhHHHHHH------HHh----hcCC-cchHHHH--HHHHHHHHHHHHHhhcCcccccC
Q 028928 94 MI----A--TATVCLSRALRDENPKMLMAA------SAL----ALPI-QPLMVSA--VHTGMMEVAFAKRALNDPNLRMA 154 (201)
Q Consensus 94 aI----A--YTP~~l~~~l~~~~~~~lla~------~Gi----~~~~-~~~l~~~--l~mGw~~i~~~~~l~~~~~~~~l 154 (201)
+| | |||+++. .+++..++.++++ .|| .+++ +|+++.. ++|||++++.++++. +.+
T Consensus 95 ~I~vLIAgSyTP~~l~-~l~~~~~~~~~~iiW~lal~Gi~~kl~~~~~~r~ls~~~yl~mGw~~v~~~~~l~-----~~l 168 (226)
T COG1272 95 GIYVLIAGSYTPFLLV-GLYGPLGWILLGLIWGLALAGILFKLFFKKRFRKLSLVLYLAMGWLGLIVIKPLI-----AKL 168 (226)
T ss_pred HHHHHHHHhhHHHhHH-HhccchHHHHHHHHHHHHHHHHhhhhhccCcCceeeehhhHHHHHHHHHHHHHHH-----HhC
Confidence 99 4 9999997 9999999987765 666 4455 8888888 999999999999999 999
Q ss_pred cHHHHHHHHHhhHHHhhcccc---c--CCCchhhHHHHHHHHHHHhh
Q 028928 155 HTVHKVSSLLGGVFFIADDVF---P--ETPYLHAAWHLAAAVGVGTC 196 (201)
Q Consensus 155 ~~~~~~lll~GG~~YtiG~if---~--~~p~~H~IWHlfV~~ga~~~ 196 (201)
|+..+.++++||++|++|++| | +.|+.|+|||+||++||+++
T Consensus 169 ~~~~~~~l~~GGv~YsvG~ifY~~~~~~~~~~H~iwH~fVv~ga~~H 215 (226)
T COG1272 169 GLIGLVLLALGGVLYSVGAIFYVLRIDRIPYSHAIWHLFVVGGAACH 215 (226)
T ss_pred chHHHHHHHHHhHHheeeeEEEEEeeccCCchHHHHHHHHHHHHHHH
Confidence 999999999999999999999 5 69999999999999999875
No 2
>PRK15087 hemolysin; Provisional
Probab=100.00 E-value=8.5e-37 Score=258.47 Aligned_cols=163 Identities=20% Similarity=0.251 Sum_probs=140.6
Q ss_pred CCCchhhHHHHHhHHHHHHHh----------c----CCchhHHHHHHHHHHHHHHHHHHhhhhccch-hHHHHHHHhhhh
Q 028928 29 DLHLLERVANVLTSLPFIALG----------L----QTPRKNLNMTLYANSLVGVGVTSSLYHSSRG-KLRKYLRWADYA 93 (201)
Q Consensus 29 ~~~~~ee~~N~~TH~i~li~~----------~----~~~~~~~~~~vy~~sli~l~~~StlYH~~~~-~~k~~~r~lDH~ 93 (201)
.+++.||.+|++||+++++.. + .+..+..++.+|+++++++|++||+||..++ +.|+++||+||+
T Consensus 10 ~~~~~eE~~N~~tH~ig~~~a~~~~~~l~~~~~~~~~~~~~~~~~~vy~~s~~~l~~~StlYH~~~~~~~~~~~~rlDh~ 89 (219)
T PRK15087 10 GYSLAEEIANSISHGIGLVFGIVGLVLLLVQAVDANADATAITSYSLYGGSMILLFLASTLYHAIPHQRAKRWLKKFDHC 89 (219)
T ss_pred CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHccHH
Confidence 367789999999999954321 1 2335678899999999999999999999985 889999999999
Q ss_pred hh----h--hhHHHHHhhcCCchhHHHHHH------HHh----hcCC-cchHHHH--HHHHHHHHHHHHHhhcCcccccC
Q 028928 94 MI----A--TATVCLSRALRDENPKMLMAA------SAL----ALPI-QPLMVSA--VHTGMMEVAFAKRALNDPNLRMA 154 (201)
Q Consensus 94 aI----A--YTP~~l~~~l~~~~~~~lla~------~Gi----~~~~-~~~l~~~--l~mGw~~i~~~~~l~~~~~~~~l 154 (201)
+| | |||+++. .+++++++.++++ .|+ ++.+ +|++++. ++|||++++.++++. +.+
T Consensus 90 ~I~llIaGsytP~~~~-~~~~~~~~~l~~~iW~~a~~Gi~~~~~~~~~~r~l~~~~Yl~mGw~~v~~~~~l~-----~~~ 163 (219)
T PRK15087 90 AIYLLIAGTYTPFLLV-GLDSPLARGLMIVIWSLALLGILFKLAFAHRFKVLSLVTYLAMGWLSLIVIYQLA-----IKL 163 (219)
T ss_pred HHHHHHHHhhHHHHHH-HccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHH-----HhC
Confidence 99 4 9999997 8888888876554 576 4455 7888888 999999999999998 888
Q ss_pred cHHHHHHHHHhhHHHhhcccc---cCCCchhhHHHHHHHHHHHhhh
Q 028928 155 HTVHKVSSLLGGVFFIADDVF---PETPYLHAAWHLAAAVGVGTCN 197 (201)
Q Consensus 155 ~~~~~~lll~GG~~YtiG~if---~~~p~~H~IWHlfV~~ga~~~~ 197 (201)
++.++.|+++||++|++|++| |+.|+.|+|||+||++|+.++-
T Consensus 164 ~~~~l~~l~~GG~~Y~~G~~fY~~~~~p~~H~IwH~fVl~ga~~H~ 209 (219)
T PRK15087 164 AIGGVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSVCHF 209 (219)
T ss_pred CHHHHHHHHHHhHHHHhhHHHHccCCCCCchhHHHHHHHHHHHHHH
Confidence 999999999999999999999 5799999999999999998764
No 3
>TIGR01065 hlyIII channel protein, hemolysin III family. This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.
Probab=99.98 E-value=2.2e-31 Score=222.90 Aligned_cols=158 Identities=23% Similarity=0.230 Sum_probs=133.9
Q ss_pred hhHHHHHhHHHHHHH----------hc---CCchhHHHHHHHHHHHHHHHHHHhhhhccch--hHHHHHHHhhhhhh---
Q 028928 34 ERVANVLTSLPFIAL----------GL---QTPRKNLNMTLYANSLVGVGVTSSLYHSSRG--KLRKYLRWADYAMI--- 95 (201)
Q Consensus 34 ee~~N~~TH~i~li~----------~~---~~~~~~~~~~vy~~sli~l~~~StlYH~~~~--~~k~~~r~lDH~aI--- 95 (201)
||.+|++||+++.+. .+ .+..+..+..+|+++++++|++||+||..+. +.++++||+||++|
T Consensus 1 ~e~~N~~tH~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~vy~~~~~~~~~~St~yH~~~~s~~~~~~~~rlD~~gI~~l 80 (204)
T TIGR01065 1 EEIANAITHGIGAVLSIIALALLVIYSWDHGGAVAVLGFSIYGISLILLFLVSTLYHSIPKGSKAKNWLRKIDHSMIYVL 80 (204)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHCCcCchhHHHHHHHccHHHHHHH
Confidence 799999999995432 11 3345789999999999999999999998873 88999999999999
Q ss_pred -h--hhHHHHHhhcCCchhHHHHHH------HHh----hcCC-cchHHHH--HHHHHHHHHHHHHhhcCcccccCcHHHH
Q 028928 96 -A--TATVCLSRALRDENPKMLMAA------SAL----ALPI-QPLMVSA--VHTGMMEVAFAKRALNDPNLRMAHTVHK 159 (201)
Q Consensus 96 -A--YTP~~l~~~l~~~~~~~lla~------~Gi----~~~~-~~~l~~~--l~mGw~~i~~~~~l~~~~~~~~l~~~~~ 159 (201)
+ |||.++. .+.+.+++.++.+ +|+ ++.+ +|++++. ++|||+++..++++. +.+++.++
T Consensus 81 IaGsytP~~~~-~~~~~~~~~~~~~iw~la~~gi~~~~~~~~~~r~~r~~~y~~~G~~~v~~~~~~~-----~~~~~~~~ 154 (204)
T TIGR01065 81 IAGTYTPFLLL-ALPGPLGWTVLWIIWGLAIGGIIYKLFFHKRPRWLSLFLYLIMGWLVVLVIKPLY-----HNLPGAGF 154 (204)
T ss_pred HHHhhHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHHHHccCCCchhHHHHHHHHHHHHHHHHHHHH-----HhCCHHHH
Confidence 3 9999997 8888887766554 565 4445 7888887 999999999999888 78899999
Q ss_pred HHHHHhhHHHhhcccc---c-CCCch-hhHHHHHHHHHHHhhh
Q 028928 160 VSSLLGGVFFIADDVF---P-ETPYL-HAAWHLAAAVGVGTCN 197 (201)
Q Consensus 160 ~lll~GG~~YtiG~if---~-~~p~~-H~IWHlfV~~ga~~~~ 197 (201)
.++++||++|++|++| | +.|+. |+|||+||++|+.++-
T Consensus 155 ~~l~~gg~~Y~~G~~fY~~~~p~~~~~H~iwH~fV~~g~~~h~ 197 (204)
T TIGR01065 155 SLLAAGGLLYTVGAIFYALKWPIPFTYHAIWHLFVLGASACHF 197 (204)
T ss_pred HHHHHHhHHHHcchHheeecCCCCCCcChHHHHHHHHHHHHHH
Confidence 9999999999999999 3 67788 9999999999998753
No 4
>KOG4243 consensus Macrophage maturation-associated protein [Defense mechanisms]
Probab=99.90 E-value=8.6e-25 Score=184.70 Aligned_cols=159 Identities=26% Similarity=0.311 Sum_probs=128.1
Q ss_pred CCchhhHHHHHhHHHHHH---Hh-------cCCchhHHHHHHHHHHHHHHHHHHhhhhccc------h---hHHHHHHHh
Q 028928 30 LHLLERVANVLTSLPFIA---LG-------LQTPRKNLNMTLYANSLVGVGVTSSLYHSSR------G---KLRKYLRWA 90 (201)
Q Consensus 30 ~~~~ee~~N~~TH~i~li---~~-------~~~~~~~~~~~vy~~sli~l~~~StlYH~~~------~---~~k~~~r~l 90 (201)
.|..|..+|++||+++++ ++ +++-++.+...|||..++.+|++||.||... + +.|..+.++
T Consensus 81 PT~~EhvAN~~tHai~I~PaIl~~~~l~~~s~~d~q~i~awIYG~~lc~LFt~STvfH~~~~~~~hqn~~r~l~~~lH~c 160 (298)
T KOG4243|consen 81 PTEYEHVANCYTHAIWIVPAILGSALLHRLSDDDWQKITAWIYGMGLCALFTVSTVFHIVSWKKSHQNKLRTLEHCLHMC 160 (298)
T ss_pred CchHHHHHhhHhhHhhhhHHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467789999999999764 11 2677899999999999999999999999863 1 467899999
Q ss_pred hhhhh----h--hhHHHHHhhcCC-----chhHHHHHHHHh---hcCC--cchHHHH--HHHHHHHHHHHHHhhcCcccc
Q 028928 91 DYAMI----A--TATVCLSRALRD-----ENPKMLMAASAL---ALPI--QPLMVSA--VHTGMMEVAFAKRALNDPNLR 152 (201)
Q Consensus 91 DH~aI----A--YTP~~l~~~l~~-----~~~~~lla~~Gi---~~~~--~~~l~~~--l~mGw~~i~~~~~l~~~~~~~ 152 (201)
|+++| | |+|+..++-++. .|-.|+++.+|| +..+ ++.++++ +.||.-+..++- .
T Consensus 161 DRa~IY~FIAaSY~PWLtLr~~g~~~~~m~W~IWlmA~~Gi~Yq~~fHErYK~lEt~~Ylvmg~gPalvv~--------s 232 (298)
T KOG4243|consen 161 DRAVIYFFIAASYAPWLTLRELGPLASHMRWFIWLMAAGGIIYQFLFHERYKVLETFFYLVMGFGPALVVT--------S 232 (298)
T ss_pred hhhHhhhhhhhcccccccHHhhCcHHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHHHHHHHhcCceEEEE--------E
Confidence 99999 4 999976653333 356678888999 3333 7778888 999987766553 2
Q ss_pred cCcHHHHHHHHHhhHHHhhcccc----cCCCchhhHHHHHHHHHHHhh
Q 028928 153 MAHTVHKVSSLLGGVFFIADDVF----PETPYLHAAWHLAAAVGVGTC 196 (201)
Q Consensus 153 ~l~~~~~~lll~GG~~YtiG~if----~~~p~~H~IWHlfV~~ga~~~ 196 (201)
.-...++.++..||.+|.+|.+| ..+|+.|+|||+||+.||+|.
T Consensus 233 m~~~~Gl~~l~~GG~~Y~lGvvFFK~DG~ipfAHAIWHLFV~l~A~cH 280 (298)
T KOG4243|consen 233 MNNTDGLQELATGGLFYCLGVVFFKSDGIIPFAHAIWHLFVALAAGCH 280 (298)
T ss_pred eCCchhHHHHHhCCEEEEEEEEEEecCCceehHHHHHHHHHHHHcchh
Confidence 33467889999999999999999 468999999999999999874
No 5
>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins. This family includes proteins that are hemolysin-III homologs.; GO: 0016021 integral to membrane
Probab=99.88 E-value=9e-22 Score=163.94 Aligned_cols=160 Identities=18% Similarity=0.159 Sum_probs=120.1
Q ss_pred CchhhHHHHHhHHHHHHHh----------c--C--CchhHHHHHHHHHHHHHHHHHHhhhhccc---h-hHHHHHHHhhh
Q 028928 31 HLLERVANVLTSLPFIALG----------L--Q--TPRKNLNMTLYANSLVGVGVTSSLYHSSR---G-KLRKYLRWADY 92 (201)
Q Consensus 31 ~~~ee~~N~~TH~i~li~~----------~--~--~~~~~~~~~vy~~sli~l~~~StlYH~~~---~-~~k~~~r~lDH 92 (201)
+.-||.+|.+||+++.+.. . + +........+|..+.+.++++||+||.+. . +.+++++++||
T Consensus 2 ~~hNEt~NiwtHll~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~St~yH~f~~~s~~~~~~~~~~lD~ 81 (222)
T PF03006_consen 2 QLHNETVNIWTHLLGAILFLALLIFLLSLASSPSFSPWDYIPFLIYLLSAILCFLCSTLYHLFSCHSEGKVYHIFLRLDY 81 (222)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhHHHhhCCCcCCcHHHHHHHHhcch
Confidence 3568999999999964321 1 2 34578899999999999999999999954 3 78999999999
Q ss_pred hhh----h--hhHHHHHhhc--CCchhHHHHHH------HHh---h-cC---C-cchHHHH--HHHHHHHHHHHHHhhcC
Q 028928 93 AMI----A--TATVCLSRAL--RDENPKMLMAA------SAL---A-LP---I-QPLMVSA--VHTGMMEVAFAKRALND 148 (201)
Q Consensus 93 ~aI----A--YTP~~l~~~l--~~~~~~~lla~------~Gi---~-~~---~-~~~l~~~--l~mGw~~i~~~~~l~~~ 148 (201)
++| + |||.+.. .+ .+.+++..+++ .|+ . .. . .+.+++. +.|||.++.......
T Consensus 82 ~gI~l~i~gs~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~p~~~~~-- 158 (222)
T PF03006_consen 82 AGIFLLIAGSYTPFIYY-GFYCHPWLGWFYLAFIWILALIGIVLSLFPCFSSPRFRWLRTIFFLLLGWSGIIPIFHRI-- 158 (222)
T ss_pred hhhhHhHhhhhhhHHHh-hccccchHHHHHHHHHHHHHHHhHHhhcchhhcCCccceeeehHhHHHHHHHHhhhHHHH--
Confidence 999 2 9999886 67 35555544433 555 1 11 1 3445555 999999988777633
Q ss_pred cccccCcHHH----HHHHHHhhHHHhhcccc---c------CCCc-----hhhHHHHHHHHHHHhh
Q 028928 149 PNLRMAHTVH----KVSSLLGGVFFIADDVF---P------ETPY-----LHAAWHLAAAVGVGTC 196 (201)
Q Consensus 149 ~~~~~l~~~~----~~lll~GG~~YtiG~if---~------~~p~-----~H~IWHlfV~~ga~~~ 196 (201)
..++..+ +.+++.|+++|++|++| + +.|+ .|.+||+||++|+.++
T Consensus 159 ---~~~~~~~~~~~~~~~~~~~~~y~~G~~fy~~~~PEr~~pg~fD~~g~sHqi~Hi~v~~~~~~h 221 (222)
T PF03006_consen 159 ---FFLGGWGSPDPLWLLILGGVLYLLGAVFYATRIPERWFPGKFDIWGHSHQIWHIFVVLAALCH 221 (222)
T ss_pred ---HHhccccchHHHHHHHHHHHHHHHhHHHhhhccccccCCCCcCCCCccHHHHHHHHHHHHHHH
Confidence 3333333 88899999999999999 2 3445 7999999999998764
No 6
>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane
Probab=99.31 E-value=5e-11 Score=102.99 Aligned_cols=180 Identities=20% Similarity=0.226 Sum_probs=106.1
Q ss_pred CCCCcc-cccCCCC-CchhhHHHHHhHHHHHHHhc------CCchhHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHH
Q 028928 18 CLRPIR-GCIHGDL-HLLERVANVLTSLPFIALGL------QTPRKNLNMTLYANSLVGVGVTSSLYHSSRGKLRKYLRW 89 (201)
Q Consensus 18 ~~~~~~-~~~~~~~-~~~ee~~N~~TH~i~li~~~------~~~~~~~~~~vy~~sli~l~~~StlYH~~~~~~k~~~r~ 89 (201)
.+++++ ||.|-.. ...-|++|++||+.+++.+. .+........+..+++++++..|++||++.+ ...|.
T Consensus 7 ~ts~~dwCE~nY~~s~yiAEf~NtlSNl~fi~~al~gl~~~~~~~~~~~~~l~~~~l~~VGiGS~~FHaTl~---~~~ql 83 (262)
T PF05875_consen 7 PTSTIDWCEENYVVSPYIAEFWNTLSNLAFIVAALYGLYLARRRGLERRFALLYLGLALVGIGSFLFHATLS---YWTQL 83 (262)
T ss_pred CCcccccchhccccCcccchHHHHHHHHHHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHhHHHHHhChh---hhHHH
Confidence 345556 5544332 23369999999999887543 1112223445667789999999999999876 55899
Q ss_pred hhhhhh--h---hhHHHHHhhc-CCchhHHH---HHHHHh-----hcC-CcchHHHH------HHHHHHHHHHHHH----
Q 028928 90 ADYAMI--A---TATVCLSRAL-RDENPKML---MAASAL-----ALP-IQPLMVSA------VHTGMMEVAFAKR---- 144 (201)
Q Consensus 90 lDH~aI--A---YTP~~l~~~l-~~~~~~~l---la~~Gi-----~~~-~~~~l~~~------l~mGw~~i~~~~~---- 144 (201)
+|+.+| + ++-..+.+.. +...+..+ +.+.++ ... ..+.+... +.........+..
T Consensus 84 ~DelPMl~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~t~~~~~~~~p~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 163 (262)
T PF05875_consen 84 LDELPMLWATLLFLYIVLTRRYSSPRYRLALPLLLFIYAVVVTVLYFVLDNPVFHQIAFASLVLLVILRSIYLIRRRVRD 163 (262)
T ss_pred hhhhhHHHHHHHHHHHHhcccccCchhhHHHHHHHHHHHHHHHHHHhhhccchhhhhhHHHHHHHHHHHHHHHHHHhcCc
Confidence 999999 2 3322222111 11122211 111111 111 13333222 2222222233332
Q ss_pred hhcCcccccCcHHHHHHHHHhhHHHhhcccc-c-----CCCc---------hhhHHHHHHHHHHHhhhhhc
Q 028928 145 ALNDPNLRMAHTVHKVSSLLGGVFFIADDVF-P-----ETPY---------LHAAWHLAAAVGVGTCNKLL 200 (201)
Q Consensus 145 l~~~~~~~~l~~~~~~lll~GG~~YtiG~if-~-----~~p~---------~H~IWHlfV~~ga~~~~~ll 200 (201)
-.++++.+++...+...++.|-.++.++..+ + +.++ .|+.||+++.+|++...+..
T Consensus 164 ~~~~~~~~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~~ 234 (262)
T PF05875_consen 164 ACRRRRARRLLLFGLALFLVAFFFWNIDRIFCSSLRAIRFPYGLPLGFLLELHAWWHILTGIGAYLLIVFV 234 (262)
T ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHhHHHHHccccccccccCCcchhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 1246666667777777878888888888887 2 2223 79999999999999988754
No 7
>KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms]
Probab=98.99 E-value=9.2e-09 Score=90.68 Aligned_cols=161 Identities=16% Similarity=0.133 Sum_probs=90.7
Q ss_pred chhhHHHHHhHHHHHHHh----c----------CCc-hhHHHHHHHHHHHHHHHHHHhhhhccch---hHHHHHHHhhhh
Q 028928 32 LLERVANVLTSLPFIALG----L----------QTP-RKNLNMTLYANSLVGVGVTSSLYHSSRG---KLRKYLRWADYA 93 (201)
Q Consensus 32 ~~ee~~N~~TH~i~li~~----~----------~~~-~~~~~~~vy~~sli~l~~~StlYH~~~~---~~k~~~r~lDH~ 93 (201)
.-.|..|.+||.++.+.. . .+. ... ..+|-.+ ....|.+||.+.. +.++.+.++|++
T Consensus 47 ~hNEt~NiwTHLlg~i~f~~~~~~~~~~~~~~~~~~~~~~--~~lf~~~---~~~~S~~~H~~~~~s~~~~~~~~~lDY~ 121 (286)
T KOG0748|consen 47 WHNETLNIWTHLLGFILFLFLLILFMPRVLLPVDSHLSEK--IFLFFLG---CLLLSSLYHLFSCHSEKVSRFFLKLDYA 121 (286)
T ss_pred hhcccchhHHHHHHHHHHHHHHHHHcccccccccccchHH--HHHHHHH---HHHHHHHHHHHhcccHHHHHHHHHccHH
Confidence 345999999999954321 1 011 111 2222222 1122999999873 889999999999
Q ss_pred hh-----h-hhHHHHHhhcCCch--hHHHHHH---HHh---h------cCCc--chHHHH--HHHH-HHHHHHHHHhhcC
Q 028928 94 MI-----A-TATVCLSRALRDEN--PKMLMAA---SAL---A------LPIQ--PLMVSA--VHTG-MMEVAFAKRALND 148 (201)
Q Consensus 94 aI-----A-YTP~~l~~~l~~~~--~~~lla~---~Gi---~------~~~~--~~l~~~--l~mG-w~~i~~~~~l~~~ 148 (201)
+| + +.|.... ++.... ....+.. .|+ + +..+ +..... +.+| +..++..-.+...
T Consensus 122 GIs~li~gS~~~~~yy-~f~c~~~~~~iy~~~~~~lgi~~~~~~l~~~~~~~~~r~~R~~~f~~~~~~~i~P~~h~~~~~ 200 (286)
T KOG0748|consen 122 GISLLIIGSFLPIIYY-AFYCHPFFRLIYLPIILVLGLLAIFVSLSDKFRTPKRRPLRAGVFLLLGLSGILPLLHRLILF 200 (286)
T ss_pred hhHHHHHHHHHHHHHH-hcccchHHHHHHHHHHHHHHHHHheeechhhhCCccchhhHHHHHHHHHHhhccHhhhheeee
Confidence 99 2 5665543 444221 1111111 233 1 1111 222333 6666 3444444444322
Q ss_pred cccccCcHHHHHHHHHhhHHHhhcccc--c----C-CC-------chhhHHHHHHHHHHHhhhh
Q 028928 149 PNLRMAHTVHKVSSLLGGVFFIADDVF--P----E-TP-------YLHAAWHLAAAVGVGTCNK 198 (201)
Q Consensus 149 ~~~~~l~~~~~~lll~GG~~YtiG~if--~----~-~p-------~~H~IWHlfV~~ga~~~~~ 198 (201)
...+......+.+....++.|.+|++| - | .| ..|-|||++|++|+..+..
T Consensus 201 g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~SHQifHv~vv~~a~~~~~ 264 (286)
T KOG0748|consen 201 GGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHSHQIFHVLVVLAALFHLE 264 (286)
T ss_pred cCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCChhHHHHHHHHHHHHHHHH
Confidence 211112345667778888999999998 2 2 34 2499999999999987653
No 8
>KOG2329 consensus Alkaline ceramidase [Lipid transport and metabolism]
Probab=98.27 E-value=6.7e-07 Score=78.03 Aligned_cols=175 Identities=20% Similarity=0.226 Sum_probs=102.8
Q ss_pred CCCcc-cccCCCC-CchhhHHHHHhHHHHHHHh---c-CCchhHHHHH--HHHHHHHHHHHHHhhhhccchhHHHHHHHh
Q 028928 19 LRPIR-GCIHGDL-HLLERVANVLTSLPFIALG---L-QTPRKNLNMT--LYANSLVGVGVTSSLYHSSRGKLRKYLRWA 90 (201)
Q Consensus 19 ~~~~~-~~~~~~~-~~~ee~~N~~TH~i~li~~---~-~~~~~~~~~~--vy~~sli~l~~~StlYH~~~~~~k~~~r~l 90 (201)
+.+++ +++|-.. ...-|.+|+.||.++++.. . +.+++.+.-. +=++++..++++|.+||++.+ ..+|.+
T Consensus 16 tS~~dWCE~NY~~s~yIAEf~NT~sN~~fil~~~~~l~~~y~~~~e~~~~l~~v~~~ivgl~S~~fH~TL~---~~~Qll 92 (276)
T KOG2329|consen 16 TSTVDWCEENYAVSPYIAEFANTESNSPFILLAFIGLHCAYRQKLEKRAYLICVLFTIVGLGSMYFHMTLV---YKGQLL 92 (276)
T ss_pred CchhhhhhhchhhhHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhHH---Hhheeh
Confidence 55566 5655433 3446999999999988542 2 3444444333 445668889999999999986 458999
Q ss_pred hhhhh--h--------hhHHHHHh---hcCCchhHHHHHH----HHhhcCCcchHHHHHHHHHHHHHHHH------Hhhc
Q 028928 91 DYAMI--A--------TATVCLSR---ALRDENPKMLMAA----SALALPIQPLMVSAVHTGMMEVAFAK------RALN 147 (201)
Q Consensus 91 DH~aI--A--------YTP~~l~~---~l~~~~~~~lla~----~Gi~~~~~~~l~~~l~mGw~~i~~~~------~l~~ 147 (201)
|+.++ + |.|-.+.+ .-+....+.++.+ +|.-+. .|.+.. +..|-+.+.... ....
T Consensus 93 DElamiw~i~~~~~~cy~p~~~~~~~~~~~~tF~~~~~~~avt~~~l~~~-~p~~n~-v~~~~~s~~v~v~~~~~~~~~~ 170 (276)
T KOG2329|consen 93 DELAMIWEIPLVSLLCYFPKFLVKETFSKRLTFILVLLILAVTIVGLSFL-EPIVNA-VALGFFSLPVAVVSMYEYYIHV 170 (276)
T ss_pred hhhhHHHHHHHHHHhhcchhhhccccccchhHHHHHHHHHHHHHHHHHhh-ccHHHH-HHHHHHHHHHHHHhhhhheeec
Confidence 99998 2 55555431 0111222333222 333110 222211 233332222222 1125
Q ss_pred CcccccCcHHHHHHHHHhhHHHhhcccc-------cC---CC-----chhhHHHHHHHHHHHhhhh
Q 028928 148 DPNLRMAHTVHKVSSLLGGVFFIADDVF-------PE---TP-----YLHAAWHLAAAVGVGTCNK 198 (201)
Q Consensus 148 ~~~~~~l~~~~~~lll~GG~~YtiG~if-------~~---~p-----~~H~IWHlfV~~ga~~~~~ 198 (201)
+|+.+.++.....++..|-+++-.+..+ ++ .| +.|++||+|...+.+..++
T Consensus 171 ~~~~r~l~~~~~i~~~v~~~~w~~D~~~c~f~~~~~~~l~~~~gi~l~~~a~Whv~s~~~~y~~~~ 236 (276)
T KOG2329|consen 171 NDAKRNLGATGVILWLVGFIFWFLDRLLCSFWLRLRRYLALPLGILLELHAWWHVLTSIGSYRTIT 236 (276)
T ss_pred cHhHhccCceeeeehhhhcchhhhhHHHHHHHHHhhhhhccHHHHHHHHHHHHhheecCChhHHHH
Confidence 6677777777566667777777777776 12 23 3599999999998866554
No 9
>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.
Probab=95.88 E-value=0.057 Score=44.84 Aligned_cols=147 Identities=18% Similarity=0.244 Sum_probs=70.2
Q ss_pred hHHHHHhHHHHHHHh--cCCchhHHHHHHHHHHHHHHHHHHhhhhccc-hh--------HHHHHHHhhhhhh--h--hhH
Q 028928 35 RVANVLTSLPFIALG--LQTPRKNLNMTLYANSLVGVGVTSSLYHSSR-GK--------LRKYLRWADYAMI--A--TAT 99 (201)
Q Consensus 35 e~~N~~TH~i~li~~--~~~~~~~~~~~vy~~sli~l~~~StlYH~~~-~~--------~k~~~r~lDH~aI--A--YTP 99 (201)
-..=++||+.++-.. +-..+...-..+|..+| .+|+.||+.. .. .-+.+|-+|-.+- + -|.
T Consensus 8 ~l~l~lSnl~~lP~i~~a~rr~~~~Ea~v~~~tm----~~S~~YHacd~~~~~~~lc~~~~~~L~~~~~~~s~~~~~vtl 83 (186)
T PF12036_consen 8 FLLLTLSNLAFLPTIYVAVRRRYHFEAFVYTFTM----FFSTFYHACDSGPGEIFLCIMDWHRLQNIDFIGSFLSIWVTL 83 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH----HHHHhcccccCCCCceEEeechHHHHHHHHHHHHHHHHHHHH
Confidence 345577888866321 11122233355665554 6799999986 11 2133444443332 2 444
Q ss_pred HHHHhhcCCchhHHH--HHHHHh-hc--CC-cchHHHH--HHHHHHHHHHHHHhhcCcccccCcHH----HHHHHHHhhH
Q 028928 100 VCLSRALRDENPKML--MAASAL-AL--PI-QPLMVSA--VHTGMMEVAFAKRALNDPNLRMAHTV----HKVSSLLGGV 167 (201)
Q Consensus 100 ~~l~~~l~~~~~~~l--la~~Gi-~~--~~-~~~l~~~--l~mGw~~i~~~~~l~~~~~~~~l~~~----~~~lll~GG~ 167 (201)
.++. .++......+ +++..+ +. .+ .+..++. ++.|-+.+... -.+++.+.++..+. ....++.|.+
T Consensus 84 ~~~a-~~~~~~~~~l~~~~~~~~ai~~~~~~~~~~~~~~Pi~~~~~i~~~~-w~~r~~~~~~~~~~~~~~~~~~l~~g~~ 161 (186)
T PF12036_consen 84 CAMA-RLDEPLKSVLHYFGALVIAIFQQKDRWSLWNTIGPILIGLLILLVS-WLYRCRRRRRCYPPSWRRWLFYLLPGII 161 (186)
T ss_pred HHhc-cCCHHHHHHHHHHHHHHHHHHHhhCcccchhhHHHHHHHHHHHHHH-HheecccCCccCChHHHHHHHHHHHHHH
Confidence 4442 3333332222 222222 11 12 2222333 55554444333 23343333444333 3445567777
Q ss_pred HHhhccc-c--cCCC--chhhHHHH
Q 028928 168 FFIADDV-F--PETP--YLHAAWHL 187 (201)
Q Consensus 168 ~YtiG~i-f--~~~p--~~H~IWHl 187 (201)
+.++|.. | ++++ +.|.+||+
T Consensus 162 ~~~~Gl~~f~et~dnY~~~HSlWHi 186 (186)
T PF12036_consen 162 FFILGLDLFLETNDNYRIVHSLWHI 186 (186)
T ss_pred HHHHHHhHhhcCCCcEEEEeeeeeC
Confidence 8888877 3 3444 57999995
No 10
>KOG2970 consensus Predicted membrane protein [Function unknown]
Probab=83.52 E-value=17 Score=32.69 Aligned_cols=57 Identities=18% Similarity=0.056 Sum_probs=36.2
Q ss_pred HHHHHhHHHHHHHhc----CCc--hhHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHhhhhhh
Q 028928 36 VANVLTSLPFIALGL----QTP--RKNLNMTLYANSLVGVGVTSSLYHSSRGKLRKYLRWADYAMI 95 (201)
Q Consensus 36 ~~N~~TH~i~li~~~----~~~--~~~~~~~vy~~sli~l~~~StlYH~~~~~~k~~~r~lDH~aI 95 (201)
..|-++|.-+++... ++. +......||+..-+.-...|+++|.-... +=+++|+.+=
T Consensus 112 ~lNl~~h~~g~~~~r~~~~~~~~~r~~~l~~I~a~i~mnawiwSsvFH~rD~~---lTEklDYf~A 174 (319)
T KOG2970|consen 112 FLNLITHYKGLVKFRRPKKPNRPTRYERLWLIYAYIGMNAWIWSSVFHIRDVP---LTEKLDYFSA 174 (319)
T ss_pred HHHHHHHHHHHhheecccCCCCcchhccchhhHHHHHHHHHHHHHhhhhcCCc---hHhhhhHHHH
Confidence 345556665554322 121 21255668888777788999999998752 2467898765
No 11
>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [].
Probab=60.95 E-value=1.2e+02 Score=26.77 Aligned_cols=34 Identities=21% Similarity=0.260 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHHHhhhhccchhHHHHHHHhhhhhh
Q 028928 59 MTLYANSLVGVGVTSSLYHSSRGKLRKYLRWADYAMI 95 (201)
Q Consensus 59 ~~vy~~sli~l~~~StlYH~~~~~~k~~~r~lDH~aI 95 (201)
..+|+..-+.--..||+||.-.... =.++|+.+=
T Consensus 89 ~~~~~~v~~naW~wStvFH~RD~~~---TE~lDYf~A 122 (267)
T PF04080_consen 89 YIIYAIVSMNAWIWSTVFHTRDTPL---TEKLDYFSA 122 (267)
T ss_pred eehHHHHHHHHHHHHHHHHHhcccH---hhHhHHhhh
Confidence 6678888888899999999876533 457898765
No 12
>COG5237 PER1 Predicted membrane protein [Function unknown]
Probab=55.87 E-value=81 Score=28.00 Aligned_cols=58 Identities=17% Similarity=0.085 Sum_probs=34.5
Q ss_pred hHHHHHhHHHHHHHhc----C-CchhHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHhhhhhh
Q 028928 35 RVANVLTSLPFIALGL----Q-TPRKNLNMTLYANSLVGVGVTSSLYHSSRGKLRKYLRWADYAMI 95 (201)
Q Consensus 35 e~~N~~TH~i~li~~~----~-~~~~~~~~~vy~~sli~l~~~StlYH~~~~~~k~~~r~lDH~aI 95 (201)
...|-++|-.++.-.. . ...+...+..|...-..-+..|++||.-.. .+=+++|+-.=
T Consensus 108 S~~Nfi~hy~gfh~m~r~i~~e~~~~R~~~l~wv~igmlAwi~SsvFHird~---~iTeklDYF~A 170 (319)
T COG5237 108 SFMNFITHYIGFHRMLRKILRETRLGRLYYLQWVYIGMLAWISSSVFHIRDN---TITEKLDYFLA 170 (319)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccceEEeeHHHHHHHHHHHHhheeeecc---chhhhHHHHHh
Confidence 4567777777664332 1 122334555565455566899999998765 22456777544
No 13
>PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1
Probab=50.86 E-value=27 Score=33.96 Aligned_cols=25 Identities=20% Similarity=0.175 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhccch
Q 028928 57 LNMTLYANSLVGVGVTSSLYHSSRG 81 (201)
Q Consensus 57 ~~~~vy~~sli~l~~~StlYH~~~~ 81 (201)
.-.-.-|++|++.+..|+.||..|+
T Consensus 314 ~~~~~~g~~li~egi~sa~yh~CPn 338 (570)
T PF13965_consen 314 GLFYAMGLALIMEGILSACYHICPN 338 (570)
T ss_pred hhHHHHHHHHHHHHHHHHHhhcCcC
Confidence 3344677889999999999999874
No 14
>COG5500 Predicted integral membrane protein [Function unknown]
Probab=31.12 E-value=60 Score=25.85 Aligned_cols=46 Identities=22% Similarity=0.309 Sum_probs=26.5
Q ss_pred cchHHHH-HHHHHHHHHHHHHhhcCcccccCcHHHHHHHHHhhHHHhhcccc
Q 028928 125 QPLMVSA-VHTGMMEVAFAKRALNDPNLRMAHTVHKVSSLLGGVFFIADDVF 175 (201)
Q Consensus 125 ~~~l~~~-l~mGw~~i~~~~~l~~~~~~~~l~~~~~~lll~GG~~YtiG~if 175 (201)
.|.+-+. ++-|-+++..+.... -.-+..+-.++++|+..|-+|..-
T Consensus 55 nPlFmtAf~GTgllcliLl~~a~-----~gW~~pgsy~Llag~l~YlvGt~~ 101 (159)
T COG5500 55 NPLFMTAFLGTGLLCLILLISAL-----LGWHQPGSYYLLAGSLLYLVGTFG 101 (159)
T ss_pred ChHHHHHHHhhhHHHHHHHHHHH-----hccCCCCchhhhhhhhhheecCce
Confidence 3444444 555555554443322 111233446779999999999875
No 15
>KOG2736 consensus Presenilin [Signal transduction mechanisms]
Probab=22.05 E-value=3.5e+02 Score=25.29 Aligned_cols=121 Identities=12% Similarity=-0.022 Sum_probs=69.7
Q ss_pred CCchhhHHHHHhHHHHHHHh----------c--CCchhHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHhhhhhhh-
Q 028928 30 LHLLERVANVLTSLPFIALG----------L--QTPRKNLNMTLYANSLVGVGVTSSLYHSSRGKLRKYLRWADYAMIA- 96 (201)
Q Consensus 30 ~~~~ee~~N~~TH~i~li~~----------~--~~~~~~~~~~vy~~sli~l~~~StlYH~~~~~~k~~~r~lDH~aIA- 96 (201)
.+..+..++++.|++.++.. + -+-.+.+-..+=..|+.++|..|..|- .+.+|+-.|+
T Consensus 60 ~s~~~k~l~sl~N~li~i~viv~~Tfllv~ly~~rfyk~ik~wl~~Ss~llLf~~s~~~l---------~~v~~~~~ip~ 130 (406)
T KOG2736|consen 60 DSTGQKLLDSLLNALIMISVIVVMTFLLVVLYKYRFYKFIKAWLILSSLLLLFLFSGIYL---------GEVFKTYNVPV 130 (406)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHhCCCc
Confidence 44567888888888854321 1 122445555566677899999998882 2334444453
Q ss_pred -hhHHHHHhhcCCchhHHHHHHHHh---hcCCcchHHHH--HHHHHHHHHHHHHhhcCcccccCcHHHHHHHHHhhHHHh
Q 028928 97 -TATVCLSRALRDENPKMLMAASAL---ALPIQPLMVSA--VHTGMMEVAFAKRALNDPNLRMAHTVHKVSSLLGGVFFI 170 (201)
Q Consensus 97 -YTP~~l~~~l~~~~~~~lla~~Gi---~~~~~~~l~~~--l~mGw~~i~~~~~l~~~~~~~~l~~~~~~lll~GG~~Yt 170 (201)
|.-+.++ +.+ ++++|+ +|..+..+.=+ +.++-+...++- +.+|....|+++..-.+|=
T Consensus 131 dy~T~~ll--l~n------fgvvGm~~ihwkgpl~L~Q~YlI~~~aLmAl~fi--------k~LPeWTtW~iL~ais~~D 194 (406)
T KOG2736|consen 131 DYITFLLL--LWN------FGVVGMYSIHWKGPLRLQQAYLIMISALMALFFI--------KYLPEWTTWFILVAISVYD 194 (406)
T ss_pred ccceeeee--eec------cccceEEEEEeCCceeehhHHHHHHHHHHHHHHH--------HHCccHHHHHHHHHHHHHH
Confidence 3333332 222 666777 33334444433 555554444443 4557777777777777887
Q ss_pred hcccc
Q 028928 171 ADDVF 175 (201)
Q Consensus 171 iG~if 175 (201)
+=++.
T Consensus 195 LvAVL 199 (406)
T KOG2736|consen 195 LVAVL 199 (406)
T ss_pred HHHHh
Confidence 76666
No 16
>PF04193 PQ-loop: PQ loop repeat
Probab=21.07 E-value=2.4e+02 Score=18.12 Aligned_cols=39 Identities=8% Similarity=0.175 Sum_probs=28.0
Q ss_pred HHHHHHHHhh---cCcccccCcHHHHHHHHHhhHHHhhcccc
Q 028928 137 MEVAFAKRAL---NDPNLRMAHTVHKVSSLLGGVFFIADDVF 175 (201)
Q Consensus 137 ~~i~~~~~l~---~~~~~~~l~~~~~~lll~GG~~YtiG~if 175 (201)
..+..+|+++ +++..+.++...+.+.+.|.+++.+..++
T Consensus 13 ~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~~~~~ 54 (61)
T PF04193_consen 13 WIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVLYSIL 54 (61)
T ss_pred HHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 3445556555 55666677888888888999988887776
Done!