Query 028930
Match_columns 201
No_of_seqs 126 out of 1269
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:19:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028930.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028930hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8e_A PPM1B beta isoform vari 100.0 6.3E-35 2.1E-39 244.7 17.8 167 29-201 21-205 (307)
2 2i0o_A Ser/Thr phosphatase; be 100.0 1.3E-34 4.3E-39 242.5 17.8 166 29-201 20-204 (304)
3 3qn1_B Protein phosphatase 2C 100.0 1.2E-34 3.9E-39 246.2 16.6 170 29-201 11-227 (337)
4 3kdj_B Protein phosphatase 2C 100.0 1.9E-34 6.6E-39 242.6 15.9 166 30-201 7-198 (316)
5 1a6q_A Phosphatase 2C; catalyt 100.0 3.6E-34 1.2E-38 246.9 15.1 166 30-201 20-198 (382)
6 2isn_A NYSGXRC-8828Z, phosphat 100.0 7.8E-34 2.7E-38 243.4 17.0 165 30-201 11-238 (364)
7 2iq1_A Protein phosphatase 2C 100.0 3.5E-33 1.2E-37 230.5 18.1 168 30-201 6-180 (274)
8 2irm_A Mitogen-activated prote 100.0 5.9E-33 2E-37 237.4 12.7 156 37-201 25-230 (358)
9 2i44_A Serine-threonine phosph 100.0 1E-32 3.5E-37 232.5 13.7 170 30-201 20-221 (324)
10 2j4o_A Mitogen-activated prote 100.0 1.9E-33 6.6E-38 243.7 9.3 173 24-201 19-244 (401)
11 3d8k_A PP2C, protein phosphata 100.0 4.1E-33 1.4E-37 239.9 10.8 164 29-201 10-231 (377)
12 4da1_A Protein phosphatase 1K, 100.0 9.1E-32 3.1E-36 232.4 16.6 167 31-201 121-294 (389)
13 2pnq_A [pyruvate dehydrogenase 100.0 9.1E-32 3.1E-36 237.1 13.0 165 30-201 35-283 (467)
14 2pk0_A Serine/threonine protei 99.9 1.1E-27 3.7E-32 194.4 13.2 162 31-201 5-172 (250)
15 2j82_A TPPHA, protein serine-t 99.9 5.7E-27 1.9E-31 188.9 14.6 159 32-201 1-168 (240)
16 1txo_A Putative bacterial enzy 99.9 5.1E-26 1.7E-30 183.2 15.0 130 31-168 4-137 (237)
17 2jfr_A Ser-Thr phosphatase MSP 99.9 8.8E-26 3E-30 181.4 11.8 153 30-201 4-161 (234)
18 3rnr_A Stage II sporulation E 99.8 8.5E-21 2.9E-25 150.7 12.4 105 61-169 8-116 (211)
19 3t91_A Stage II sporulation pr 99.2 1.3E-10 4.4E-15 93.2 10.9 125 29-166 5-134 (242)
20 3pu9_A Protein serine/threonin 99.1 3.4E-09 1.2E-13 85.3 16.4 129 28-166 7-137 (242)
21 3zt9_A Serine phosphatase; hyd 98.5 9.7E-06 3.3E-10 62.7 15.7 119 31-166 3-123 (193)
22 3f79_A Probable two-component 98.5 3.7E-06 1.3E-10 67.6 13.4 127 31-166 37-170 (255)
23 3ke6_A Protein RV1364C/MT1410; 97.0 0.025 8.6E-07 48.2 14.6 124 30-165 34-161 (399)
24 3eq2_A Probable two-component 93.2 1.2 3.9E-05 37.3 11.6 111 45-166 188-309 (394)
25 1b33_N Phycobilisome 7.8 KD li 20.6 58 0.002 20.3 2.0 16 167-182 37-52 (67)
No 1
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=6.3e-35 Score=244.72 Aligned_cols=167 Identities=28% Similarity=0.419 Sum_probs=141.7
Q ss_pred CCceEEEEEeecCCCCCCCCccEEEEeeecC-CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCC-----------
Q 028930 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQ-GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFW----------- 96 (201)
Q Consensus 29 ~~~~~~~~~s~~G~~r~~nED~~~~~~~~~~-~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~~----------- 96 (201)
...+.+++.+++|+ |++|||++++...... ..+..+|+|||||||..+|++++..+++.+.+...+.
T Consensus 21 ~~~~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~ 99 (307)
T 2p8e_A 21 GNGLRYGLSSMQGW-RVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALEL 99 (307)
T ss_dssp ETTEEEEEEEEEET-SSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------
T ss_pred CCCeeEEEEecCCC-CCcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccc
Confidence 35799999999999 7999999876554321 2457899999999999999999999999987643222
Q ss_pred --CCHHHHHHHHHHHHHHHHHhcCCC--CCCCccceEEEEEEeCCEEEEEEcccccEEEEeCCeeEeCCCCCCC--hhHH
Q 028930 97 --VDPQRSISKAYEKTDQAILSHSSD--LGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTER 170 (201)
Q Consensus 97 --~~~~~~l~~~f~~~~~~l~~~~~~--~~~~g~Ttl~~~~i~~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~--~~E~ 170 (201)
..+.++|+++|.++|+.|.+.... ....+|||++++++.++++|+|||||||+|++|+|++.+||+||+| +.|+
T Consensus 100 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~ 179 (307)
T 2p8e_A 100 SVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREK 179 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHH
Confidence 135788999999999999875432 2245788888889999999999999999999999999999999999 8899
Q ss_pred HHHHhCCCeEEeCCCCcceeeceeeecccCC
Q 028930 171 GSIEDKGGFVSNMPEYQVILVGIINLICPFP 201 (201)
Q Consensus 171 ~Ri~~agg~i~~~~~~~~rv~G~l~~sR~~G 201 (201)
+||..+||.|.. .|++|.|++||+||
T Consensus 180 ~rI~~~gg~v~~-----~rv~g~l~ltRalG 205 (307)
T 2p8e_A 180 ERIQNAGGSVMI-----QRVNGSLAVSRALG 205 (307)
T ss_dssp HHHHHTTCCEET-----TEETTTBSCSBCEE
T ss_pred HHHHHcCCEEEe-----CcccCeEecccccc
Confidence 999999999986 79999999999997
No 2
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-34 Score=242.51 Aligned_cols=166 Identities=29% Similarity=0.432 Sum_probs=141.3
Q ss_pred CCceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC-CCCHHHHHHHHH
Q 028930 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF-WVDPQRSISKAY 107 (201)
Q Consensus 29 ~~~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~-~~~~~~~l~~~f 107 (201)
...+.+++.+++|+ |..|||++++..... .+..+|+|||||||..++++++..++..+.+...+ ..++.++|+++|
T Consensus 20 ~~~~~~~~~s~~G~-R~~nED~~~~~~~~~--~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~ 96 (304)
T 2i0o_A 20 NEFLASGSSSMQGW-RISQEDAHNCILNFD--DQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAF 96 (304)
T ss_dssp CSSEEEEEEEEEES-SSCCCEEEEEEEEEE--TTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHH
T ss_pred CCceEEEEeecCCC-CCCccCEEEEEeccC--CCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHHH
Confidence 55799999999998 799999987654332 35789999999999999999999999888764322 246789999999
Q ss_pred HHHHHHHHhcC----------------CCCCCCccceEEEEEEeCCEEEEEEcccccEEEEeCCeeEeCCCCCCC--hhH
Q 028930 108 EKTDQAILSHS----------------SDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTE 169 (201)
Q Consensus 108 ~~~~~~l~~~~----------------~~~~~~g~Ttl~~~~i~~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~--~~E 169 (201)
.++|+.|.+.. ......+|||++++++.++++|+|||||||+|++++|++++||+||+| +.|
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~e 176 (304)
T 2i0o_A 97 LGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVE 176 (304)
T ss_dssp HHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHH
T ss_pred HHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCCcCHHH
Confidence 99999886531 122456888888889999999999999999999999999999999999 789
Q ss_pred HHHHHhCCCeEEeCCCCcceeeceeeecccCC
Q 028930 170 RGSIEDKGGFVSNMPEYQVILVGIINLICPFP 201 (201)
Q Consensus 170 ~~Ri~~agg~i~~~~~~~~rv~G~l~~sR~~G 201 (201)
+.||..+||+|.. .+|++|.+++||+||
T Consensus 177 ~~rI~~~gg~v~~----~~rv~g~l~ltRalG 204 (304)
T 2i0o_A 177 YQRIEKAGGRVTL----DGRVNGGLNLSRAIG 204 (304)
T ss_dssp HHHHHHTTCCBCT----TSCBTTSCSCSBCEE
T ss_pred HHHHHhCCCEEEe----CCeEcCceecccccc
Confidence 9999999999984 269999999999997
No 3
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=1.2e-34 Score=246.16 Aligned_cols=170 Identities=24% Similarity=0.331 Sum_probs=143.6
Q ss_pred CCceEEEEEeecCCCCCCCCccEEEEeeecC------------------CCceEEEEEecCCCCChHHHHHHHHHHHHHH
Q 028930 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQ------------------GHELGLFAIYDGHLGETVPAYLQKHLFSNIL 90 (201)
Q Consensus 29 ~~~~~~~~~s~~G~~r~~nED~~~~~~~~~~------------------~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~ 90 (201)
..-..||..+++|+ |.+|||++++...... ..+..+|+|||||||..++++++..++..+.
T Consensus 11 ~~~~~~G~~s~~G~-R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~ 89 (337)
T 3qn1_B 11 DCIPLWGTVSIQGN-RSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALA 89 (337)
T ss_dssp CCSCCEEEEEECTT-SSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHH
T ss_pred cccCceEEEEeeeC-CchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHH
Confidence 33456999999999 7899999987644221 1257899999999999999999999988887
Q ss_pred hccCC--------------CCCHHHHHHHHHHHHHHHHHhcCC-------------CCCCCccceEEEEEEeCCEEEEEE
Q 028930 91 KEEEF--------------WVDPQRSISKAYEKTDQAILSHSS-------------DLGRGGSTAVTAILINGQRLWVAN 143 (201)
Q Consensus 91 ~~~~~--------------~~~~~~~l~~~f~~~~~~l~~~~~-------------~~~~~g~Ttl~~~~i~~~~l~van 143 (201)
+.... ...+.++|+++|..+|+.+..... .....+|||++++++.++++|+||
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~an 169 (337)
T 3qn1_B 90 EEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSN 169 (337)
T ss_dssp HHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEE
T ss_pred HHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEe
Confidence 64211 134678999999999999987541 122568888888899999999999
Q ss_pred cccccEEEEeCCeeEeCCCCCCC--hhHHHHHHhCCCeEEeCCCCcceeeceeeecccCC
Q 028930 144 VGDSRAVLSTAGVAVQMTTDHEP--NTERGSIEDKGGFVSNMPEYQVILVGIINLICPFP 201 (201)
Q Consensus 144 vGDSra~l~~~g~~~~Lt~dH~~--~~E~~Ri~~agg~i~~~~~~~~rv~G~l~~sR~~G 201 (201)
|||||+|++|++++++||+||+| +.|+.||+.+||.+..+.+ .|++|.|++||+||
T Consensus 170 vGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~--~r~~g~l~~sRalG 227 (337)
T 3qn1_B 170 CGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQG--ARVFGVLAMSRSIG 227 (337)
T ss_dssp ESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSS--EEETTTBSCSBCEE
T ss_pred ccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCC--ceecCccccccccc
Confidence 99999999999999999999999 8999999999999998877 79999999999997
No 4
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=1.9e-34 Score=242.64 Aligned_cols=166 Identities=24% Similarity=0.380 Sum_probs=138.7
Q ss_pred CceEEEEEeecCCCCCCCCccEEEEeeec-------------CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC-
Q 028930 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQL-------------QGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF- 95 (201)
Q Consensus 30 ~~~~~~~~s~~G~~r~~nED~~~~~~~~~-------------~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~- 95 (201)
.-..||+.+++|+ |++|||++++..... ...+..+|+|||||||..+++++++.++..+.+....
T Consensus 7 ~~~~~g~~s~~G~-R~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~ 85 (316)
T 3kdj_B 7 SVPLYGFTSICGR-RPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKE 85 (316)
T ss_dssp ---CEEEEEECTT-SSSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeEeC-CCCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3467999999999 799999997643321 1236789999999999999999999998888754211
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHhcCCCCCCCccceEEEEEEeCCEEEEEEcccccEEEEeCCeeEeCCCCCC
Q 028930 96 ----------WVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHE 165 (201)
Q Consensus 96 ----------~~~~~~~l~~~f~~~~~~l~~~~~~~~~~g~Ttl~~~~i~~~~l~vanvGDSra~l~~~g~~~~Lt~dH~ 165 (201)
...+.++|+++|.++|+.+..... ..+|||++++++.++++|+|||||||+|++|++++++||+||+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~---~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~ 162 (316)
T 3kdj_B 86 KPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAP---ETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHK 162 (316)
T ss_dssp CCCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTSC---TTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCC
T ss_pred hcccccccchHHHHHHHHHHHHHHHHHHHhcccC---CCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCC
Confidence 113578899999999999866443 3578888888999999999999999999999999999999999
Q ss_pred C--hhHHHHHHhCCCeEEeCCCCcceeeceeeecccCC
Q 028930 166 P--NTERGSIEDKGGFVSNMPEYQVILVGIINLICPFP 201 (201)
Q Consensus 166 ~--~~E~~Ri~~agg~i~~~~~~~~rv~G~l~~sR~~G 201 (201)
| +.|+.||..+||.+..+.+ +|++|.|++||+||
T Consensus 163 ~~~~~e~~ri~~~~g~v~~~~~--~r~~g~l~~sRalG 198 (316)
T 3kdj_B 163 PDREDEAARIEAAGGKVIQWNG--ARVFGVLAMSRSIG 198 (316)
T ss_dssp TTSHHHHHHHHHTTCCEEESSS--EEETTTBSCSBCEE
T ss_pred CCCHHHHHHHHHcCCeEEecCC--ceEcceeccccccC
Confidence 9 8899999999999998877 79999999999997
No 5
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=3.6e-34 Score=246.85 Aligned_cols=166 Identities=26% Similarity=0.403 Sum_probs=140.7
Q ss_pred CceEEEEEeecCCCCCCCCccEEEEeeecC-CCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC--------CCCHH
Q 028930 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQ-GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF--------WVDPQ 100 (201)
Q Consensus 30 ~~~~~~~~s~~G~~r~~nED~~~~~~~~~~-~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~--------~~~~~ 100 (201)
..+.+++++++|+ |..|||++++...... ..+..+|+|||||||..+|++++..++..+.+...+ ...+.
T Consensus 20 ~~l~~g~~s~~G~-R~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~ 98 (382)
T 1a6q_A 20 NGLRYGLSSMQGW-RVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVK 98 (382)
T ss_dssp TTEEEEEEEEEET-SSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHH
T ss_pred CceEEEEEecCCC-CCCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHH
Confidence 4789999999999 7999999877654322 245789999999999999999999999988753111 12457
Q ss_pred HHHHHHHHHHHHHHHhcC--CCCCCCccceEEEEEEeCCEEEEEEcccccEEEEeCCeeEeCCCCCCC--hhHHHHHHhC
Q 028930 101 RSISKAYEKTDQAILSHS--SDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTERGSIEDK 176 (201)
Q Consensus 101 ~~l~~~f~~~~~~l~~~~--~~~~~~g~Ttl~~~~i~~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~--~~E~~Ri~~a 176 (201)
++|+++|..+|+.|.... ......+|||++++++.++++|+|||||||+|++|+|++.+||+||+| +.|++||..+
T Consensus 99 ~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI~~~ 178 (382)
T 1a6q_A 99 NGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA 178 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHHHhc
Confidence 889999999999998743 222345788888889999999999999999999999999999999999 7899999999
Q ss_pred CCeEEeCCCCcceeeceeeecccCC
Q 028930 177 GGFVSNMPEYQVILVGIINLICPFP 201 (201)
Q Consensus 177 gg~i~~~~~~~~rv~G~l~~sR~~G 201 (201)
||.|.. .|++|.|++||+||
T Consensus 179 gg~v~~-----~Rv~g~l~ltRalG 198 (382)
T 1a6q_A 179 GGSVMI-----QRVNGSLAVSRALG 198 (382)
T ss_dssp TCCEET-----TEETTTBSCSBCEE
T ss_pred CcEEec-----ccccCceeeeeecC
Confidence 999986 79999999999997
No 6
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=7.8e-34 Score=243.39 Aligned_cols=165 Identities=25% Similarity=0.311 Sum_probs=134.3
Q ss_pred CceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Q 028930 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEK 109 (201)
Q Consensus 30 ~~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~~~~~~~~l~~~f~~ 109 (201)
..+.++..+++|+ |+.|||++++.......++..||+|||||||..+|++++++|+..+.+.... ..+.|+++|.+
T Consensus 11 ~~~~~~~~s~~G~-R~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~~---~~~~l~~a~~~ 86 (364)
T 2isn_A 11 WYTTTVAATMLGR-RPTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSEF---TFAEVKKACLS 86 (364)
T ss_dssp TTEEEEEEEECTT-SSSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSSC---CHHHHHHHHHH
T ss_pred CceEEEEEEcCCC-CCcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhcc---cHHHHHHHHHH
Confidence 3478999999999 8999999977654433467899999999999999999999999988654332 36789999999
Q ss_pred HHHHHHhcCCCCCCCccceEEEEEEeC-----------------------------------------------------
Q 028930 110 TDQAILSHSSDLGRGGSTAVTAILING----------------------------------------------------- 136 (201)
Q Consensus 110 ~~~~l~~~~~~~~~~g~Ttl~~~~i~~----------------------------------------------------- 136 (201)
+|+.|.+..... ..+|||++++++.+
T Consensus 87 ~d~~i~~~~~~~-~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (364)
T 2isn_A 87 LDAEIIRKLGPK-HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQQ 165 (364)
T ss_dssp HHHHHHHHHCSS-SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCEE
T ss_pred HHHHHHHhcccC-CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhcccccccccccccccccc
Confidence 999997754433 34566666555531
Q ss_pred -------CEEEEEEcccccEEEE-eCCeeEeCCCCCCC--hhHHHHHHhCCCeEEeCCCCcceeeceeeecccCC
Q 028930 137 -------QRLWVANVGDSRAVLS-TAGVAVQMTTDHEP--NTERGSIEDKGGFVSNMPEYQVILVGIINLICPFP 201 (201)
Q Consensus 137 -------~~l~vanvGDSra~l~-~~g~~~~Lt~dH~~--~~E~~Ri~~agg~i~~~~~~~~rv~G~l~~sR~~G 201 (201)
.++|+|||||||+|++ ++|++++||+||+| +.|+.||+++||.|.... .+|++|.|++||+||
T Consensus 166 ~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~~~--~~rv~g~l~ltRalG 238 (364)
T 2isn_A 166 KTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVETFD--VPRVDGVLALSRAFG 238 (364)
T ss_dssp EEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEESS--SEEETTTBSCSBCEE
T ss_pred cccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEecCC--CcccCCceeeEEEec
Confidence 3899999999999999 68999999999999 789999999999998632 369999999999997
No 7
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.5e-33 Score=230.53 Aligned_cols=168 Identities=29% Similarity=0.361 Sum_probs=138.1
Q ss_pred CceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHH
Q 028930 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEK 109 (201)
Q Consensus 30 ~~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~~~~~~~~l~~~f~~ 109 (201)
....++++|++|+ |++|||++++... .++..+|+|||||||..+|++++..+.+.+.+......++.+.|+++|.+
T Consensus 6 ~~~~~g~~s~~G~-R~~nED~~~~~~~---~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~ 81 (274)
T 2iq1_A 6 SLENVGCASQIGK-RKENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLE 81 (274)
T ss_dssp CGGGCEEEEECCS-SSSCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred cCCeEEEEecccC-CCCccceEEEeeC---CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 3456899999999 8999999865431 24678999999999999999999988888776544445788999999999
Q ss_pred HHHHHHhcCC----CCCCCccceEEEEEEe-CCEEEEEEcccccEEEEeCCeeEeCCCCCCC--hhHHHHHHhCCCeEEe
Q 028930 110 TDQAILSHSS----DLGRGGSTAVTAILIN-GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTERGSIEDKGGFVSN 182 (201)
Q Consensus 110 ~~~~l~~~~~----~~~~~g~Ttl~~~~i~-~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~--~~E~~Ri~~agg~i~~ 182 (201)
+|+.|.+... .....+|||++++++. ++++|++||||||+|++++|++.+||+||+| +.|+.||+++||.|..
T Consensus 82 ~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~ 161 (274)
T 2iq1_A 82 IDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAW 161 (274)
T ss_dssp HHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEEc
Confidence 9999987431 1224566777666776 4699999999999999999999999999999 7999999999999986
Q ss_pred CCCCcceeeceeeecccCC
Q 028930 183 MPEYQVILVGIINLICPFP 201 (201)
Q Consensus 183 ~~~~~~rv~G~l~~sR~~G 201 (201)
-.....|++|.+++||+||
T Consensus 162 ~~~~~~~~~~~~~ltralG 180 (274)
T 2iq1_A 162 NSLGQPHVNGRLAMTRSIG 180 (274)
T ss_dssp CTTSCEEETTTBSCSBCEE
T ss_pred CCCCceeECCeEeeccccC
Confidence 3222348899999999997
No 8
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=5.9e-33 Score=237.40 Aligned_cols=156 Identities=17% Similarity=0.215 Sum_probs=129.8
Q ss_pred EeecCCCCC--CCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhc-c---CCCCCHHHHHHHHHHHH
Q 028930 37 SLVKGKANH--PMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKE-E---EFWVDPQRSISKAYEKT 110 (201)
Q Consensus 37 ~s~~G~~r~--~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~-~---~~~~~~~~~l~~~f~~~ 110 (201)
++.+|++|. +|||++++.. ...+..+|+|||||||..+|++++..++..+.+. . ....++.++|+++|.++
T Consensus 25 ~~~~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~~a~~~~ 101 (358)
T 2irm_A 25 YKDDGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKELIRQSFMSV 101 (358)
T ss_dssp ECSSSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 667999653 6999987543 2356789999999999999999999999988752 1 11235688999999999
Q ss_pred HHHHHhcCC-------------------------------------CCCCCccceEEEEEEeCCEEEEEEcccccEEEEe
Q 028930 111 DQAILSHSS-------------------------------------DLGRGGSTAVTAILINGQRLWVANVGDSRAVLST 153 (201)
Q Consensus 111 ~~~l~~~~~-------------------------------------~~~~~g~Ttl~~~~i~~~~l~vanvGDSra~l~~ 153 (201)
|+.|.+... .....+|||++++++.++++|+|||||||+|+++
T Consensus 102 d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r 181 (358)
T 2irm_A 102 EKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCK 181 (358)
T ss_dssp HHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEE
T ss_pred HHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEE
Confidence 999875320 0123588888888999999999999999999999
Q ss_pred C---C--eeEeCCCCCCC--hhHHHHHHhCCCeEEeCCCCcceeeceeeecccCC
Q 028930 154 A---G--VAVQMTTDHEP--NTERGSIEDKGGFVSNMPEYQVILVGIINLICPFP 201 (201)
Q Consensus 154 ~---g--~~~~Lt~dH~~--~~E~~Ri~~agg~i~~~~~~~~rv~G~l~~sR~~G 201 (201)
+ | ++++||+||+| +.|++||.++||.|.. .|++|.+ +||+||
T Consensus 182 ~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~-----~r~~g~l-lTRalG 230 (358)
T 2irm_A 182 TDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQN-----FEGVPLY-STRCIG 230 (358)
T ss_dssp CCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGG-----GTTCTTC-BSBCEE
T ss_pred ecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEec-----cCcCCEE-cccCCc
Confidence 8 8 99999999999 7899999999999886 6899988 999998
No 9
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=1e-32 Score=232.53 Aligned_cols=170 Identities=18% Similarity=0.252 Sum_probs=133.6
Q ss_pred CceEEEEEeecCCCCCCCCccEEEEeeec-CCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCC-------------
Q 028930 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQL-QGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF------------- 95 (201)
Q Consensus 30 ~~~~~~~~s~~G~~r~~nED~~~~~~~~~-~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~------------- 95 (201)
..+.+++.+++|+ |+.|||++++..... ...+..+|+|||||||..++++++..++..+.+...+
T Consensus 20 ~~~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~ 98 (324)
T 2i44_A 20 PAFDAAIFTDIGG-RKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPA 98 (324)
T ss_dssp TTEEEEEEEECTT-SSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCH
T ss_pred cceEEEEEECCCC-CCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCc
Confidence 4688999999999 899999987653321 2356789999999999999999999998888653111
Q ss_pred -------CCCHHHHHHHHHHHHHHHHHhcCCC--CCCCccceEEEEEEeCCEEEEEEcccccEEEEeC---C-eeEeCCC
Q 028930 96 -------WVDPQRSISKAYEKTDQAILSHSSD--LGRGGSTAVTAILINGQRLWVANVGDSRAVLSTA---G-VAVQMTT 162 (201)
Q Consensus 96 -------~~~~~~~l~~~f~~~~~~l~~~~~~--~~~~g~Ttl~~~~i~~~~l~vanvGDSra~l~~~---g-~~~~Lt~ 162 (201)
...+.++|+++|.++|+.|.+.... ....|+||.++ ++.++++|+|||||||+|++++ | ++++||+
T Consensus 99 ~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~-~i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~ 177 (324)
T 2i44_A 99 TEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTA-VLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTV 177 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEE-EEETTEEEEEEESSCEEEEEEEETTEEEEEESCC
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEE-EEECCeEEEEEccCceEEEEeccCCCceEEECCC
Confidence 1235788999999999999875321 22233444333 3788899999999999999996 7 8999999
Q ss_pred CCCC--hhHHHHHHhCCCeEEeCCC---CcceeeceeeecccCC
Q 028930 163 DHEP--NTERGSIEDKGGFVSNMPE---YQVILVGIINLICPFP 201 (201)
Q Consensus 163 dH~~--~~E~~Ri~~agg~i~~~~~---~~~rv~G~l~~sR~~G 201 (201)
||+| +.|++||.++||.|....+ ...++.|.|++||+||
T Consensus 178 DH~~~~~~E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~G 221 (324)
T 2i44_A 178 DHKPDMPHEKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRG 221 (324)
T ss_dssp CCCTTSHHHHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHcCCEEEecccccCCCccccCcccchhhcC
Confidence 9999 7899999999999964321 1136789999999998
No 10
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=1.9e-33 Score=243.73 Aligned_cols=173 Identities=18% Similarity=0.243 Sum_probs=138.3
Q ss_pred CCCCCCCceEEEEEeecCCCCC-------CCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccC--
Q 028930 24 KGRSNVGLVKFGFSLVKGKANH-------PMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEE-- 94 (201)
Q Consensus 24 ~~~~~~~~~~~~~~s~~G~~r~-------~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~-- 94 (201)
........+.+|+++++|.+.. +|||++++.. ...+..||+|||||||..+|++++..++..+.+...
T Consensus 19 ~~~~~~~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~ 95 (401)
T 2j4o_A 19 DDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLGQLNA 95 (401)
T ss_dssp TTSCBCTTEEEEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSSSCCT
T ss_pred ccccccccCceeEEecccccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 3444455789999999998432 6999987543 235678999999999999999999999988864311
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHhcCC------------------------------------CCCCCccceEEEEEEeC
Q 028930 95 --FWVDPQRSISKAYEKTDQAILSHSS------------------------------------DLGRGGSTAVTAILING 136 (201)
Q Consensus 95 --~~~~~~~~l~~~f~~~~~~l~~~~~------------------------------------~~~~~g~Ttl~~~~i~~ 136 (201)
...++.++|+++|..+|+.|.+... .....+|||++++++.+
T Consensus 96 ~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~ 175 (401)
T 2j4o_A 96 EHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLN 175 (401)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEET
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEEC
Confidence 1235788999999999988765210 01235788888888999
Q ss_pred CEEEEEEcccccEEEEeCC----eeEeCCCCCCC--hhHHHHHHhCCCeEEeCCCCcceeeceeeecccCC
Q 028930 137 QRLWVANVGDSRAVLSTAG----VAVQMTTDHEP--NTERGSIEDKGGFVSNMPEYQVILVGIINLICPFP 201 (201)
Q Consensus 137 ~~l~vanvGDSra~l~~~g----~~~~Lt~dH~~--~~E~~Ri~~agg~i~~~~~~~~rv~G~l~~sR~~G 201 (201)
+++|||||||||+|+++++ ++++||+||+| +.|++||.++||.+....+ .|++|.|++||+||
T Consensus 176 ~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~--~r~~g~l~vtRalG 244 (401)
T 2j4o_A 176 NKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQ--VGIICGQESTRRIG 244 (401)
T ss_dssp TEEEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHH--HCCBTTBCCSBCEE
T ss_pred CEEEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccC--ccccCCcccccccC
Confidence 9999999999999999988 99999999999 7899999999998753322 58999999999997
No 11
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=4.1e-33 Score=239.86 Aligned_cols=164 Identities=20% Similarity=0.350 Sum_probs=133.0
Q ss_pred CCceEEEEEeecCCCCCCCC-----ccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCCHHHHH
Q 028930 29 VGLVKFGFSLVKGKANHPME-----DYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSI 103 (201)
Q Consensus 29 ~~~~~~~~~s~~G~~r~~nE-----D~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~~~~~~~~l 103 (201)
+..+.++.++++|+ |+.|| |++++.......++..+|+|||||||..+|+++++.++..+.+.. ..+.++|
T Consensus 10 ~~~~~~~~~s~~G~-R~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~---~~~~~al 85 (377)
T 3d8k_A 10 EGRTVCASATSRNR-RPTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR---DVNEEEI 85 (377)
T ss_dssp HHHHHHHHTTTCEE-EEEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS---SSSHHHH
T ss_pred CCcEEEEEEEccCC-CCccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc---ccHHHHH
Confidence 34567788899999 67664 555444333345678999999999999999999999999886543 3457899
Q ss_pred HHHHHHHHHHHHhcCCCCCCCccceEEEEEEe------------------------------------------------
Q 028930 104 SKAYEKTDQAILSHSSDLGRGGSTAVTAILIN------------------------------------------------ 135 (201)
Q Consensus 104 ~~~f~~~~~~l~~~~~~~~~~g~Ttl~~~~i~------------------------------------------------ 135 (201)
+++|.++|+.|..... .+|||++++++.
T Consensus 86 ~~af~~~d~~l~~~~~----~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~ 161 (377)
T 3d8k_A 86 TRQFERMDGDLRAANL----PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRA 161 (377)
T ss_dssp HHHHHHHHHHHHHHTC----CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGG
T ss_pred HHHHHHHHHHHHhccc----CCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999999988753 245555544542
Q ss_pred ---CCEEEEEEcccccEEEEeCCeeEeCCCCCCC--hhHHHHHHhCCCeEEeCCCCcceeeceeeecccCC
Q 028930 136 ---GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTERGSIEDKGGFVSNMPEYQVILVGIINLICPFP 201 (201)
Q Consensus 136 ---~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~--~~E~~Ri~~agg~i~~~~~~~~rv~G~l~~sR~~G 201 (201)
++++|+|||||||+|++++|++++||+||+| +.|+.||.++||.|...+| ..|++|.|++||+||
T Consensus 162 ~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g-~~rv~G~l~vtRalG 231 (377)
T 3d8k_A 162 AKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNG-ELLLGGVVPMTRAFG 231 (377)
T ss_dssp TTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSS-SEEETTTBSCSBCSS
T ss_pred ccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCC-cEEEcCceecceeec
Confidence 1489999999999999999999999999999 7899999999999986555 349999999999998
No 12
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.98 E-value=9.1e-32 Score=232.37 Aligned_cols=167 Identities=28% Similarity=0.349 Sum_probs=137.4
Q ss_pred ceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHH
Q 028930 31 LVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKT 110 (201)
Q Consensus 31 ~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~~~~~~~~l~~~f~~~ 110 (201)
...+++.+++|+ |+.|||++++... ..+..+|+|||||||..++++++..+...+.+......++.+.|+++|.++
T Consensus 121 ~~~~g~~s~~G~-R~~NED~~~~~~~---~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~~ 196 (389)
T 4da1_A 121 LENVGCASQIGK-RKENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLEI 196 (389)
T ss_dssp GGGCEEEEECTT-SSSCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH
T ss_pred ceeEEEecCCCC-CCCCcceeeeeec---CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHH
Confidence 456889999999 8999999875432 256789999999999999999999998888776555667899999999999
Q ss_pred HHHHHhcCC----CCCCCccceEEEEEEeC-CEEEEEEcccccEEEEeCCeeEeCCCCCCC--hhHHHHHHhCCCeEEeC
Q 028930 111 DQAILSHSS----DLGRGGSTAVTAILING-QRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTERGSIEDKGGFVSNM 183 (201)
Q Consensus 111 ~~~l~~~~~----~~~~~g~Ttl~~~~i~~-~~l~vanvGDSra~l~~~g~~~~Lt~dH~~--~~E~~Ri~~agg~i~~~ 183 (201)
|+.+..... .....+|||++++++.+ .++|+|||||||+|++|+|++.+||+||++ +.|++||.++||.|..-
T Consensus 197 n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~~ 276 (389)
T 4da1_A 197 DKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAWN 276 (389)
T ss_dssp HHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEECC
T ss_pred HHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEecc
Confidence 999986432 11234666666666665 499999999999999999999999999999 78999999999999853
Q ss_pred CCCcceeeceeeecccCC
Q 028930 184 PEYQVILVGIINLICPFP 201 (201)
Q Consensus 184 ~~~~~rv~G~l~~sR~~G 201 (201)
.....|++|.+++||+||
T Consensus 277 ~~~~~~~~g~l~ltRalG 294 (389)
T 4da1_A 277 SLGQPHVNGRLAMTRSIG 294 (389)
T ss_dssp ---CCEETTTBSCSBCEE
T ss_pred cCCCccCCCeEeeEeeeC
Confidence 222358999999999997
No 13
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.97 E-value=9.1e-32 Score=237.05 Aligned_cols=165 Identities=25% Similarity=0.310 Sum_probs=132.6
Q ss_pred CceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhc---------c-------
Q 028930 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKE---------E------- 93 (201)
Q Consensus 30 ~~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~---------~------- 93 (201)
+.+..++.+++|..|++|||++.+..... .+..||||||||||..+|++++..++..+... .
T Consensus 35 ~~~v~~~~s~~g~~R~~nED~~~v~~~~~--~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~ 112 (467)
T 2pnq_A 35 VSSILGFDSNRLPANAPIEDRRSATTCLQ--TRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESG 112 (467)
T ss_dssp CCSEEEEEEEEECCSSSCCEEEEEEEESS--SSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC--
T ss_pred ccceEEEEeeccCCCCCCCCceeeeeccC--CCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcc
Confidence 45667778899988999999987654322 35689999999999999999999998877532 0
Q ss_pred --------------C-----------------------------CCCCHHHHHHHHHHHHHHHHHhcCCC----------
Q 028930 94 --------------E-----------------------------FWVDPQRSISKAYEKTDQAILSHSSD---------- 120 (201)
Q Consensus 94 --------------~-----------------------------~~~~~~~~l~~~f~~~~~~l~~~~~~---------- 120 (201)
. ....+.++|+++|.++|+.|......
T Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~ 192 (467)
T 2pnq_A 113 RALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYL 192 (467)
T ss_dssp --CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHH
T ss_pred ccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccc
Confidence 0 01157899999999999999864321
Q ss_pred --CCCCccceEEEEEEeCCEEEEEEcccccEEEEe---CC--eeEeCCCCCCC--hhHHHHHHhCCCe------EEeCCC
Q 028930 121 --LGRGGSTAVTAILINGQRLWVANVGDSRAVLST---AG--VAVQMTTDHEP--NTERGSIEDKGGF------VSNMPE 185 (201)
Q Consensus 121 --~~~~g~Ttl~~~~i~~~~l~vanvGDSra~l~~---~g--~~~~Lt~dH~~--~~E~~Ri~~agg~------i~~~~~ 185 (201)
....+|||++++++.++++|||||||||||+++ +| .+++||.||+| +.|++||.++|+. +.+
T Consensus 193 ~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~--- 269 (467)
T 2pnq_A 193 VLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQ--- 269 (467)
T ss_dssp HHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSS---
T ss_pred cccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEec---
Confidence 123477777778899999999999999999998 47 79999999999 8899999999853 222
Q ss_pred CcceeeceeeecccCC
Q 028930 186 YQVILVGIINLICPFP 201 (201)
Q Consensus 186 ~~~rv~G~l~~sR~~G 201 (201)
+|++|.|++|||||
T Consensus 270 --~Rv~G~l~vtRAlG 283 (467)
T 2pnq_A 270 --DRLLGLLMPFRAFG 283 (467)
T ss_dssp --SSBTTTBSSSBCEE
T ss_pred --CccccccccchhcC
Confidence 69999999999998
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.95 E-value=1.1e-27 Score=194.42 Aligned_cols=162 Identities=17% Similarity=0.161 Sum_probs=123.0
Q ss_pred ceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHH-hccC--C--CCCHHHHHHH
Q 028930 31 LVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNIL-KEEE--F--WVDPQRSISK 105 (201)
Q Consensus 31 ~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~-~~~~--~--~~~~~~~l~~ 105 (201)
.+.+++.|++|++|+.|||++++.... ++..+|+|||||||...+++++..+.+.+. +... . ...+.+.|++
T Consensus 5 ~~~~~~~s~~G~~r~~neD~~~~~~~~---~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 81 (250)
T 2pk0_A 5 YMEISLLTDIGQRRSNNQDFINQFENK---AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLV 81 (250)
T ss_dssp CEEEEEEEECCTTCSCCCEEEEEEECT---TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHH
T ss_pred eEEEEEecCCCCCCCcCCCceEeccCC---CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHH
Confidence 479999999999889999998755432 356899999999999998888888777766 2111 1 2346788999
Q ss_pred HHHHHHHHHHhcCCCC-CCCccceEEEEEEeCCEEEEEEcccccEEEEeCCeeEeCCCCCCChhHHHHHHhCCCeEEeCC
Q 028930 106 AYEKTDQAILSHSSDL-GRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMP 184 (201)
Q Consensus 106 ~f~~~~~~l~~~~~~~-~~~g~Ttl~~~~i~~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~~~E~~Ri~~agg~i~~~~ 184 (201)
+|.++|+.|....... ...+|||++++++.+++++++|+||||+|+++++++.+||.||++..+ +.+.|+...+
T Consensus 82 ~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~---~~~~g~i~~~-- 156 (250)
T 2pk0_A 82 SIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNE---LVKAGQLTEE-- 156 (250)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHH---HHHTTSSCHH--
T ss_pred HHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHH---HHHcCCCCHH--
Confidence 9999999998753321 345788888888999999999999999999999999999999999443 2334433221
Q ss_pred CCcceeeceeeecccCC
Q 028930 185 EYQVILVGIINLICPFP 201 (201)
Q Consensus 185 ~~~~rv~G~l~~sR~~G 201 (201)
+.....+.+.+||+||
T Consensus 157 -~~~~~~~~~~ltralG 172 (250)
T 2pk0_A 157 -EAASHPQKNIITQSIG 172 (250)
T ss_dssp -HHHTCCSCCCBSCCBS
T ss_pred -HHHhCCCcceEEeecC
Confidence 0113346688999987
No 15
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.95 E-value=5.7e-27 Score=188.94 Aligned_cols=159 Identities=20% Similarity=0.154 Sum_probs=109.9
Q ss_pred eEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccC----C-CCCHHHHHHHH
Q 028930 32 VKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEE----F-WVDPQRSISKA 106 (201)
Q Consensus 32 ~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~----~-~~~~~~~l~~~ 106 (201)
+++++.|++|++|+.|||++ +... . ... +|+|||||||...+++++..+.+.+.+... . ...+.+.|+++
T Consensus 1 ~~~~~~s~~G~~r~~neD~~-~~~~-~--~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 75 (240)
T 2j82_A 1 MDVAGLTDCGLIRKSNQDAF-YIDE-K--HQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQA 75 (240)
T ss_dssp CEEEEEEECCSSCSSCCEEE-EECT-T--TCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CeEEEeCCCCCCCCcCCCcc-EecC-C--CCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHH
Confidence 47899999999889999997 4322 1 334 999999999998777776666555543211 1 34678899999
Q ss_pred HHHHHHHHHhcCCC--CCCCccceEEEEEEe--CCEEEEEEcccccEEEEeCCeeEeCCCCCCChhHHHHHHhCCCeEEe
Q 028930 107 YEKTDQAILSHSSD--LGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSN 182 (201)
Q Consensus 107 f~~~~~~l~~~~~~--~~~~g~Ttl~~~~i~--~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~~~E~~Ri~~agg~i~~ 182 (201)
|.++|+.+.+.... ....++||++++++. +++++++|+||||+|+++++++.+||.||+|..| +.++|+....
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~---~~~~g~i~~~ 152 (240)
T 2j82_A 76 FLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQ---AVQLGSLTIE 152 (240)
T ss_dssp HHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHH---C---------
T ss_pred HHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHH---HHHcCCCCHH
Confidence 99999999886432 224568888888888 8999999999999999999999999999999433 3334443222
Q ss_pred CCCCcceeeceeeecccCC
Q 028930 183 MPEYQVILVGIINLICPFP 201 (201)
Q Consensus 183 ~~~~~~rv~G~l~~sR~~G 201 (201)
. ..+..+.+.+||+||
T Consensus 153 -~--~~~~~~~~~ltralG 168 (240)
T 2j82_A 153 -Q--ARQHPWRHVLSQCLG 168 (240)
T ss_dssp ----------CCCBSCCBS
T ss_pred -H--HhcCCCcCeEeecCC
Confidence 1 123456788999987
No 16
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.94 E-value=5.1e-26 Score=183.15 Aligned_cols=130 Identities=24% Similarity=0.257 Sum_probs=109.0
Q ss_pred ceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccC--CCCCHHHHHHHHHH
Q 028930 31 LVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEE--FWVDPQRSISKAYE 108 (201)
Q Consensus 31 ~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~--~~~~~~~~l~~~f~ 108 (201)
.+.++..|++|+.|++|||++++ +..+|+|||||||..++++++..+.+.+.+... ...++.+.|+++|.
T Consensus 4 ~~~~~~~s~~G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~a~~ 75 (237)
T 1txo_A 4 VLRYAARSDRGLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAVR 75 (237)
T ss_dssp EEEEEEEEECCSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHHHHH
T ss_pred EEEEEEecCCCCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHHH
Confidence 57899999999878999999853 236999999999999999999999888876432 22368899999999
Q ss_pred HHHHHHHhcCC--CCCCCccceEEEEEEeCCEEEEEEcccccEEEEeCCeeEeCCCCCCChh
Q 028930 109 KTDQAILSHSS--DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPNT 168 (201)
Q Consensus 109 ~~~~~l~~~~~--~~~~~g~Ttl~~~~i~~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~~~ 168 (201)
++|+.+.+... .....+|||++++++.+++++++|+||||+|++++|++.+||.||+|..
T Consensus 76 ~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~ 137 (237)
T 1txo_A 76 AGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQ 137 (237)
T ss_dssp HHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHH
T ss_pred HHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHH
Confidence 99999987432 1224578888888899999999999999999999999999999999843
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.93 E-value=8.8e-26 Score=181.44 Aligned_cols=153 Identities=19% Similarity=0.162 Sum_probs=114.1
Q ss_pred CceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCC--hHHHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Q 028930 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGE--TVPAYLQKHLFSNILKEEEFWVDPQRSISKAY 107 (201)
Q Consensus 30 ~~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~--~~A~~~~~~l~~~l~~~~~~~~~~~~~l~~~f 107 (201)
..+.+++.+++|+.|+.|||++++ +..+|+|||||||. .+|.++...+...+... .+ .+.++++|
T Consensus 4 ~~~~~~~~s~~G~~r~~neD~~~~--------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~----~~-~~~l~~~~ 70 (234)
T 2jfr_A 4 SVLSAATATDQGPVRENNQDACLA--------DGILYAVADGFGARGHHASATALKTLSAGFAAA----PD-RDGLLEAV 70 (234)
T ss_dssp SEEEEEEEEECCSSCSSCCEEEEE--------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS----CS-HHHHHHHH
T ss_pred eeEEEEEecCCCCCCCcCCCccee--------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC----Cc-HHHHHHHH
Confidence 458999999999988999999854 34699999999976 67777766666655433 13 78899999
Q ss_pred HHHHHHHHhcCCCCCCCccceEEEEEEeCCE---EEEEEcccccEEEEeCCeeEeCCCCCCChhHHHHHHhCCCeEEeCC
Q 028930 108 EKTDQAILSHSSDLGRGGSTAVTAILINGQR---LWVANVGDSRAVLSTAGVAVQMTTDHEPNTERGSIEDKGGFVSNMP 184 (201)
Q Consensus 108 ~~~~~~l~~~~~~~~~~g~Ttl~~~~i~~~~---l~vanvGDSra~l~~~g~~~~Lt~dH~~~~E~~Ri~~agg~i~~~~ 184 (201)
.++|+.+.+........+|||++++++.+++ ++++|+||||+|+++++++.+||.||++..+ +.+.|+.... .
T Consensus 71 ~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~---~~~~g~i~~~-~ 146 (234)
T 2jfr_A 71 QQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGE---LVRMGEITRH-E 146 (234)
T ss_dssp HHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHHH---HHHTTSSCHH-H
T ss_pred HHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHHH---HHHcCCCCHH-H
Confidence 9999999885443222277888888888888 9999999999999999999999999998443 3334432211 0
Q ss_pred CCcceeeceeeecccCC
Q 028930 185 EYQVILVGIINLICPFP 201 (201)
Q Consensus 185 ~~~~rv~G~l~~sR~~G 201 (201)
.....+.+.+||+||
T Consensus 147 --~~~~~~~~~~tralG 161 (234)
T 2jfr_A 147 --ARWHPQRHLLTRALG 161 (234)
T ss_dssp --HTTCTTTTCBSCCBS
T ss_pred --HhcCcccceeeecCc
Confidence 011224567888887
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.85 E-value=8.5e-21 Score=150.69 Aligned_cols=105 Identities=18% Similarity=0.165 Sum_probs=81.9
Q ss_pred CceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHhcC--CCCCCCccceEEEEEEe--C
Q 028930 61 HELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHS--SDLGRGGSTAVTAILIN--G 136 (201)
Q Consensus 61 ~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~~~~~~~~l~~~f~~~~~~l~~~~--~~~~~~g~Ttl~~~~i~--~ 136 (201)
++..+|+|||||||...++.++..+.+.+.+.......+ ++++..+|+.|.... ......+|||++++++. +
T Consensus 8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~~----~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~ 83 (211)
T 3rnr_A 8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGSP----LDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRD 83 (211)
T ss_dssp TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCCH----HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTT
T ss_pred CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCCH----HHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCC
Confidence 567899999999998888877777776665532222233 577777788777643 22335688999998998 8
Q ss_pred CEEEEEEcccccEEEEeCCeeEeCCCCCCChhH
Q 028930 137 QRLWVANVGDSRAVLSTAGVAVQMTTDHEPNTE 169 (201)
Q Consensus 137 ~~l~vanvGDSra~l~~~g~~~~Lt~dH~~~~E 169 (201)
+++|++|+||||+|++|++++.+||+||++..|
T Consensus 84 ~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~ 116 (211)
T 3rnr_A 84 GTLEWASVGDCRVYLFKGGRLSRLSLDHNVSSE 116 (211)
T ss_dssp TEEEEEEESSCEEEEEETTEEEECCCCCBHHHH
T ss_pred CEEEEEEEccCeEEEEeCCEEEEECCCcHHHHH
Confidence 999999999999999999999999999998443
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.19 E-value=1.3e-10 Score=93.22 Aligned_cols=125 Identities=14% Similarity=0.089 Sum_probs=79.9
Q ss_pred CCceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHH---HHHHHHHHHHhccCCCCCHHHHHHH
Q 028930 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAY---LQKHLFSNILKEEEFWVDPQRSISK 105 (201)
Q Consensus 29 ~~~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~---~~~~l~~~l~~~~~~~~~~~~~l~~ 105 (201)
...+.+++++.-...+..+.|.+.+... ..+..+++|+||.|++..|.. ++...+..+..... + ..+
T Consensus 5 ~~~i~~~~~~~~~p~~~v~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~~---~----~~~ 74 (242)
T 3t91_A 5 SYRVSTGAAHAAKGGGLVSGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILESGI---D----EKI 74 (242)
T ss_dssp CCEEEEEEEEECTTSCSCCSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHTC---C----HHH
T ss_pred eEEEEEEeehhcCCccccCCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhCC---C----HHH
Confidence 3568889988887777899999854322 134567999999765444332 23333343333221 2 456
Q ss_pred HHHHHHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEcccccEEEEeCCeeEeCCCCCCC
Q 028930 106 AYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 106 ~f~~~~~~l~~~~~~~~~~g~Ttl~~~~i~--~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~ 166 (201)
++..+|+.+..... ..+.+|++++++. .++++++|+||+++|+++++++.+|+.++.|
T Consensus 75 ~l~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~ 134 (242)
T 3t91_A 75 AIKTINSILSLRTT---DEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNLP 134 (242)
T ss_dssp HHHHHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC---
T ss_pred HHHHHHHHHHhcCC---CCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCce
Confidence 67778888866432 2355666666665 6799999999999999999999999988877
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.12 E-value=3.4e-09 Score=85.26 Aligned_cols=129 Identities=9% Similarity=-0.033 Sum_probs=90.5
Q ss_pred CCCceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCCHHHHHHHHH
Q 028930 28 NVGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAY 107 (201)
Q Consensus 28 ~~~~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~~~~~~~~l~~~f 107 (201)
+...+.+++++.....+..+.|.|-+... ..+..+++|+||.|++..|..++..+...+........+ ..+++
T Consensus 7 m~~~~~~~~~~~~~~~~~vgGD~y~~~~~---~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~~----~~~~l 79 (242)
T 3pu9_A 7 MPVTIELAVAKTHKFGTRESGDTVELVER---PGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGVR----DGAAA 79 (242)
T ss_dssp CCEEEEEEEEEECCTTCSSCSEEEEEEEC---TTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCC----HHHHH
T ss_pred CCcEEEEEEEecccCccccCCceEEEEEe---CCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHH
Confidence 44457788888777766789999854322 134567899999998877777666443333221111112 35677
Q ss_pred HHHHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEcccccEEEEeCCeeEeCCCCCCC
Q 028930 108 EKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 108 ~~~~~~l~~~~~~~~~~g~Ttl~~~~i~--~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~ 166 (201)
.++|+.|...... ...+|+++++++ .++++++|+||+++|++++|++.+|+.+|.|
T Consensus 80 ~~~n~~l~~~~~~---~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~ 137 (242)
T 3pu9_A 80 RAAHDFLYAMRDG---KVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGGR 137 (242)
T ss_dssp HHHHHHHHHHTTT---CCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCCC
T ss_pred HHHHHHHHhccCC---CcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCcc
Confidence 7888888665422 355777776775 5699999999999999999999999999988
No 21
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=98.47 E-value=9.7e-06 Score=62.71 Aligned_cols=119 Identities=11% Similarity=0.052 Sum_probs=82.1
Q ss_pred ceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHH
Q 028930 31 LVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKT 110 (201)
Q Consensus 31 ~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~~~~~~~~l~~~f~~~ 110 (201)
.+.++.++.-......+.|.|.+... .+..+++|+||.|.+..|..++..+...+.+... .++ .+.+.++
T Consensus 3 ~~~~~~~~~p~~~~~v~GD~y~~~~~----~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~~--~~p----~~il~~l 72 (193)
T 3zt9_A 3 KLEVGIYTRAREGEIACGDACLVKRV----EGVIFLAVGDGIGHGPEAARAAEIAIASMESSMN--TGL----VNIFQLC 72 (193)
T ss_dssp CCCEEEEEECCTTCSSCSEEEEEEEE----TTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHTT--SCH----HHHHHHH
T ss_pred ccEEEEEEeccCCCCCCCCeEEEEEe----CCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHccc--CCH----HHHHHHH
Confidence 46678888776656789999865432 3457899999999877777777666665554321 233 4556677
Q ss_pred HHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEcccccEEEEeCCeeEeCCCCCCC
Q 028930 111 DQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 111 ~~~l~~~~~~~~~~g~Ttl~~~~i~--~~~l~vanvGDSra~l~~~g~~~~Lt~dH~~ 166 (201)
|+.+... .+ +|++++.+. .+++.++|+|+++.|+++++.+.++...+.+
T Consensus 73 n~~l~~~------~~-~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~g~ 123 (193)
T 3zt9_A 73 HRELRGT------RG-AVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATPGI 123 (193)
T ss_dssp HHHHTTS------SC-EEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBCCB
T ss_pred HHHHhcc------Cc-eEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCCCc
Confidence 8887532 13 344444555 5699999999999999999988777654433
No 22
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=98.45 E-value=3.7e-06 Score=67.57 Aligned_cols=127 Identities=15% Similarity=0.102 Sum_probs=76.7
Q ss_pred ceEEEEEeecCCCCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHH---HHHHHHhccCC-CCCHHHHHHHH
Q 028930 31 LVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKH---LFSNILKEEEF-WVDPQRSISKA 106 (201)
Q Consensus 31 ~~~~~~~s~~G~~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~---l~~~l~~~~~~-~~~~~~~l~~~ 106 (201)
.+.+.+...-. +...-|.|-+... ..+..+++|+||.|.+..|..++.. ++..+...... .........+.
T Consensus 37 ~~~~~~~~~p~--~~vgGD~yd~~~~---~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 111 (255)
T 3f79_A 37 GLEFSHRIIPS--LYLSGDFVDYFRV---DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSEV 111 (255)
T ss_dssp TEEEEEEEECS--SSSCSEEEEEEEE---TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHHH
T ss_pred CEEEEEEEeEh--hhcCceEEeEEEe---CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHHH
Confidence 45555554433 3578898733222 1345788999998876666655443 33433322110 01122335677
Q ss_pred HHHHHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEccc-ccEEEEeCCeeEeCCCCCCC
Q 028930 107 YEKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGD-SRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 107 f~~~~~~l~~~~~~~~~~g~Ttl~~~~i~--~~~l~vanvGD-Sra~l~~~g~~~~Lt~dH~~ 166 (201)
+..+|+.+.+.. ...++|+++++++ .++++++|+|+ ++.|++++|++.+|+.+|.|
T Consensus 112 l~~ln~~l~~~~----~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~ 170 (255)
T 3f79_A 112 LAHINRGLINTK----LGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP 170 (255)
T ss_dssp HHHHHHHHBTTB----SSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC----
T ss_pred HHHHHHHHHhcC----CCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce
Confidence 888899887532 3467888877884 67999999999 56899999999999998887
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=96.96 E-value=0.025 Score=48.21 Aligned_cols=124 Identities=10% Similarity=0.008 Sum_probs=70.7
Q ss_pred CceEEEEEeecCC-CCCCCCccEEEEeeecCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Q 028930 30 GLVKFGFSLVKGK-ANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYE 108 (201)
Q Consensus 30 ~~~~~~~~s~~G~-~r~~nED~~~~~~~~~~~~~~~~~~V~DGhgG~~~A~~~~~~l~~~l~~~~~~~~~~~~~l~~~f~ 108 (201)
+.+.+.....-.. .....-|.|-+... ++..+++|.|+.|-+-.|..++..+...+........++ .+.+.
T Consensus 34 ~~~~~~~~y~P~~~~~~vgGD~y~~~~~----~~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~~~p----~~il~ 105 (399)
T 3ke6_A 34 PGADIAAEYLVAAEDTAAGGDWFDALAL----GDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYTV----VEALE 105 (399)
T ss_dssp TTEEEEEEEECSSSSCSCCSEEEEEEEC----SSEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTTCCH----HHHHH
T ss_pred CCeEEEEEEEECCCCCCCCCceEEEEEE----CCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCH----HHHHH
Confidence 3455555444332 11356788743322 226788999997755555544443333322211111233 34555
Q ss_pred HHHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEcccccEEEEe-CCeeEeCCCCCC
Q 028930 109 KTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLST-AGVAVQMTTDHE 165 (201)
Q Consensus 109 ~~~~~l~~~~~~~~~~g~Ttl~~~~i~--~~~l~vanvGDSra~l~~-~g~~~~Lt~dH~ 165 (201)
.+|+ +..... ....+|++++.++ .+++.++|+|....|+++ +|++..+..++.
T Consensus 106 ~ln~-~~~~~~---~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~ 161 (399)
T 3ke6_A 106 AVDR-FHKQVP---GSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGA 161 (399)
T ss_dssp HHHH-HGGGST---TCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSC
T ss_pred HHHH-HHHhcC---CCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCC
Confidence 6676 333322 2244555555664 568999999999999998 778888877664
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=93.21 E-value=1.2 Score=37.28 Aligned_cols=111 Identities=17% Similarity=0.118 Sum_probs=60.6
Q ss_pred CCCCccEEEEeeecCCCceEEEEEecC--CCC-ChHHHHHHHHHHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHh
Q 028930 45 HPMEDYHVAKFVQLQGHELGLFAIYDG--HLG-ETVPAYLQKHLFSNILKEEE-----FWVDPQRSISKAYEKTDQAILS 116 (201)
Q Consensus 45 ~~nED~~~~~~~~~~~~~~~~~~V~DG--hgG-~~~A~~~~~~l~~~l~~~~~-----~~~~~~~~l~~~f~~~~~~l~~ 116 (201)
.-.-|.|-+.. . ..+...++|.|+ ||= +.....+...++..+..... ...++ .+.+.++|+.+..
T Consensus 188 ~vgGD~yd~~~-~--~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~l~~ln~~l~~ 260 (394)
T 3eq2_A 188 YLSGDFVDYFR-V--DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKP----SEVLAHINRGLIN 260 (394)
T ss_dssp --CCCEEECCE-E--TTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCH----HHHHHHHHHHHHH
T ss_pred hcCccEEeEEE-e--CCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCCH----HHHHHHHHHHHhc
Confidence 45678762221 1 234567788887 542 22223333445555543311 11133 4556677887765
Q ss_pred cCCCCCCCccceEEEEEEe--CCEEEEEEccccc-EEEEeCCeeEeCCCCCCC
Q 028930 117 HSSDLGRGGSTAVTAILIN--GQRLWVANVGDSR-AVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 117 ~~~~~~~~g~Ttl~~~~i~--~~~l~vanvGDSr-a~l~~~g~~~~Lt~dH~~ 166 (201)
... ....|++.++++ .+++.++|+|-.. .++.++|.+..|.....|
T Consensus 261 ~~~----~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~p 309 (394)
T 3eq2_A 261 TKL----GKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP 309 (394)
T ss_dssp TTC----CCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC--C
T ss_pred cCc----CcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCce
Confidence 321 223444444554 5689999999854 677788988888766555
No 25
>1b33_N Phycobilisome 7.8 KD linker polypeptide; light-harvesting protein, cyanobacteria, allophycocyanin, linker polypeptides; HET: BLA CYC; 2.30A {Mastigocladus laminosus} SCOP: d.30.1.1
Probab=20.56 E-value=58 Score=20.26 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=14.7
Q ss_pred hhHHHHHHhCCCeEEe
Q 028930 167 NTERGSIEDKGGFVSN 182 (201)
Q Consensus 167 ~~E~~Ri~~agg~i~~ 182 (201)
..|.+||.+.||+|..
T Consensus 37 s~emQrI~r~GGkIvS 52 (67)
T 1b33_N 37 FREQQRIQKMGGKIVK 52 (67)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHcCCeEEE
Confidence 6899999999999887
Done!