Query 028931
Match_columns 201
No_of_seqs 140 out of 1126
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 07:21:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028931.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028931hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r8s_S 50S ribosomal protein L 100.0 1.2E-43 4.2E-48 274.7 7.8 110 83-192 1-110 (110)
2 2ftc_M Mitochondrial ribosomal 100.0 1E-42 3.5E-47 269.6 11.3 108 88-195 2-110 (110)
3 2zjr_P 50S ribosomal protein L 100.0 1.7E-42 5.8E-47 277.0 7.4 112 82-193 21-132 (134)
4 1i4j_A 50S ribosomal protein L 100.0 1.1E-41 3.9E-46 263.7 11.3 108 83-193 1-108 (110)
5 3bbo_U Ribosomal protein L22; 100.0 3.4E-41 1.2E-45 284.2 1.2 118 81-198 28-145 (199)
6 1vq8_R 50S ribosomal protein L 100.0 2.6E-39 8.8E-44 264.1 8.8 116 80-196 10-155 (155)
7 3j21_S 50S ribosomal protein L 100.0 1.5E-37 5E-42 253.7 8.0 112 81-193 14-154 (155)
8 2zkr_r 60S ribosomal protein L 100.0 6.6E-37 2.3E-41 255.9 9.8 112 81-193 11-154 (184)
9 3iz5_V 60S ribosomal protein L 100.0 9E-37 3.1E-41 252.5 8.8 112 81-193 11-155 (171)
10 4a17_Q RPL17, 60S ribosomal pr 100.0 2.9E-36 1E-40 251.6 10.2 112 81-193 13-156 (183)
11 3u5e_P L20A, YL17, 60S ribosom 100.0 2.3E-36 8E-41 252.5 7.8 112 81-193 11-154 (184)
12 3lvl_A NIFU-like protein; prot 56.2 24 0.00084 26.8 5.8 59 84-142 56-124 (129)
13 2z7e_A ISCU protein, NIFU-like 46.7 31 0.0011 27.3 5.2 60 84-143 55-125 (157)
14 4eb5_C NIFU protein (NIFU-1); 33.5 29 0.001 27.4 3.1 59 84-142 50-119 (153)
15 3lyv_A Ribosome-associated fac 28.9 25 0.00084 24.3 1.7 16 107-122 12-27 (66)
16 3ka5_A Ribosome-associated pro 27.6 25 0.00085 24.2 1.5 16 106-121 10-25 (65)
17 3k2t_A LMO2511 protein; lister 26.8 28 0.00097 23.2 1.6 16 106-121 10-25 (57)
18 2qq4_A Iron-sulfur cluster bio 24.5 72 0.0025 24.3 3.8 36 84-119 56-91 (138)
19 1xjs_A NIFU-like protein; SR17 24.4 74 0.0025 24.6 3.9 36 84-119 58-93 (147)
20 1su0_B NIFU like protein ISCU; 22.7 89 0.0031 24.5 4.1 36 84-119 57-92 (159)
No 1
>3r8s_S 50S ribosomal protein L22; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1p85_Q 1p86_Q 1vs8_S 1vs6_S 2aw4_S 2awb_S 1vt2_S 2i2v_S 2j28_S 2i2t_S* 2qao_S* 2qba_S* 2qbc_S* 2qbe_S 2qbg_S 2qbi_S* 2qbk_S* 2qov_S 2qox_S 2qoz_S* ...
Probab=100.00 E-value=1.2e-43 Score=274.70 Aligned_cols=110 Identities=40% Similarity=0.453 Sum_probs=108.1
Q ss_pred cEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHhhCCCcchhHHHHHHHHHHhhchhcCCCCCCCeEEEEEEecCCc
Q 028931 83 AEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEAT 162 (201)
Q Consensus 83 ~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~fspKKaA~~V~KlL~sA~aNA~~~~gld~d~L~I~ea~V~kG~ 162 (201)
||++|..+++++||+|+++||++||||+++||+.||+|+|+|+|+.|+++|+||.+||++++|+|+|+|||+++|||+||
T Consensus 1 me~kA~~~~ir~S~kK~r~va~~IrG~~v~~Al~~L~f~pkkaa~~v~k~L~sA~aNAe~~~gld~d~L~I~~~~v~~g~ 80 (110)
T 3r8s_S 1 METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGP 80 (110)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHTTCBHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHSSCCTTSCEEEEEEEEEEE
T ss_pred CeEEEEeCCccCcHHHHHHHHHHHcCCcHHHHHHHHhhCCHHHHHHHHHHHHHHHHhHHHhcCCChhheEEEEEEeCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcCCCCcccccccCceeEEEEEEec
Q 028931 163 SAKRPRPKAQGRVHMIKRPTCHITVVLRDM 192 (201)
Q Consensus 163 ~lKRi~pRArGRa~~i~kr~sHItVvL~E~ 192 (201)
++||++||||||+++|++++|||+|+|+|+
T Consensus 81 ~~KR~~pRA~GR~~~i~k~~~HI~vvl~ek 110 (110)
T 3r8s_S 81 SMKRIMPRAKGRADRILKRTSHITVVVSDR 110 (110)
T ss_dssp EEEEEEECGGGCEEEEEEEEEEEEEEEECC
T ss_pred ccCCCCcCCCCCCCCcccCCccEEEEEecC
Confidence 999999999999999999999999999984
No 2
>2ftc_M Mitochondrial ribosomal protein L22 isoform A; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus} PDB: 3iy9_M
Probab=100.00 E-value=1e-42 Score=269.55 Aligned_cols=108 Identities=23% Similarity=0.311 Sum_probs=105.2
Q ss_pred EeCccccCHHHHHHHHHHHhCCCHHHHHHHHhhCCCcchhHHHHHHHHHHhhchhcCCCC-CCCeEEEEEEecCCcccCC
Q 028931 88 SARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFN-EASLVIAKAEVNEATSAKR 166 (201)
Q Consensus 88 ~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~fspKKaA~~V~KlL~sA~aNA~~~~gld-~d~L~I~ea~V~kG~~lKR 166 (201)
+.+++++||+|+++||++||||+++||+.||+|+|+|+|+.|+++|+||.+||++|+|+| .|+|||++||||+||++||
T Consensus 2 ~~~~ir~SpkK~r~va~~IrG~~v~eAl~~L~f~pkkaa~~v~klL~sA~aNA~~~~gld~~~~L~I~~~~v~~g~~~KR 81 (110)
T 2ftc_M 2 CRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMAVRDHNVEFRSNLYIAESTSGRGQCLKR 81 (110)
T ss_pred CcccceeCHHHHHHHHHHHcCCcHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHhcCCCCccCeEEEEEEECCCCcccC
Confidence 578999999999999999999999999999999999999999999999999999989999 8999999999999999999
Q ss_pred CCcCCCCcccccccCceeEEEEEEecCCC
Q 028931 167 PRPKAQGRVHMIKRPTCHITVVLRDMSLD 195 (201)
Q Consensus 167 i~pRArGRa~~i~kr~sHItVvL~E~~~~ 195 (201)
++||||||+++|++++|||+|+|+|++++
T Consensus 82 ~~prA~GRa~~i~k~~~HI~vvl~e~~~p 110 (110)
T 2ftc_M 82 IRYHGRGRFGIMEKVYCHYFVKLVEGPPP 110 (110)
T ss_pred CCCCCCCCCCccccCCccEEEEEEeCCCC
Confidence 99999999999999999999999998865
No 3
>2zjr_P 50S ribosomal protein L22; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: d.55.1.1 PDB: 1j5a_L* 1jzy_L* 1jzz_L* 1k01_L* 1nkw_Q 1nwx_Q* 1nwy_Q* 1ond_Q* 1sm1_Q* 1xbp_Q* 2zjp_P* 2zjq_P 1jzx_L 3cf5_P* 3dll_P* 3pio_P* 3pip_P* 1pnu_Q 1pny_Q 1vor_T ...
Probab=100.00 E-value=1.7e-42 Score=277.01 Aligned_cols=112 Identities=36% Similarity=0.549 Sum_probs=109.3
Q ss_pred CcEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHhhCCCcchhHHHHHHHHHHhhchhcCCCCCCCeEEEEEEecCC
Q 028931 82 KAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEA 161 (201)
Q Consensus 82 ~~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~fspKKaA~~V~KlL~sA~aNA~~~~gld~d~L~I~ea~V~kG 161 (201)
.++++|..+++++||+|+++||++||||+|+||+.||+|+|+|+|+.|+++|+||.+||++|+|||+|+|||++||||+|
T Consensus 21 ~~~akA~~~~irvSpkK~r~Va~~IRG~~v~eAl~~L~f~pkKaA~~v~klL~sA~aNAe~n~gld~d~L~I~~i~V~~G 100 (134)
T 2zjr_P 21 RKPGFAVAKYVRMSPRKVRLVVDVIRGKSVQDAEDLLRFIPRSASEPVAKVLNSAKANALHNDEMLEDRLFVKEAYVDAG 100 (134)
T ss_dssp CCTTEEEEEEESSCHHHHHHHHHHSTTSBHHHHHHHHHHCCCTTHHHHHHHHTTTHHHHTTTTCCCGGGEEEEEEEEEEC
T ss_pred ceEEEEEeCCccCcHHHHHHHHHHHcCCcHHHHHHHHHHCcHhHHHHHHHHHHHHHHhHHHhcCCChhheEEEEEEECCC
Confidence 46799999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred cccCCCCcCCCCcccccccCceeEEEEEEecC
Q 028931 162 TSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 193 (201)
Q Consensus 162 ~~lKRi~pRArGRa~~i~kr~sHItVvL~E~~ 193 (201)
|++||++||||||+++|++++|||+|+|+|.+
T Consensus 101 p~lKR~~pRA~GRa~~i~k~tsHItvvl~E~~ 132 (134)
T 2zjr_P 101 PTLKRLIPRARGSANIIKKRTSHITIIVAEKG 132 (134)
T ss_dssp CCEEEEEECSTTCEEEEEECCEEEEEEEEECC
T ss_pred ccccCCCCCCCCCCcccccCCceEEEEEEecC
Confidence 99999999999999999999999999999975
No 4
>1i4j_A 50S ribosomal protein L22; mutant, erythromycin resistance, RNA binding, RNA binding protein; 1.80A {Thermus thermophilus} SCOP: d.55.1.1 PDB: 1bxe_A 1giy_S 1ml5_s* 1vsa_Q 1vsp_Q 1yl3_S 2b66_W 2b9n_W 2b9p_W 2hgj_V 2hgq_V 2hgu_V 2j01_W 2j03_W 2jl6_W 2jl8_W 2v47_W 2v49_W 2wdi_W 2wdj_W ...
Probab=100.00 E-value=1.1e-41 Score=263.68 Aligned_cols=108 Identities=43% Similarity=0.565 Sum_probs=105.6
Q ss_pred cEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHhhCCCcchhHHHHHHHHHHhhchhcCCCCCCCeEEEEEEecCCc
Q 028931 83 AEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEAT 162 (201)
Q Consensus 83 ~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~fspKKaA~~V~KlL~sA~aNA~~~~gld~d~L~I~ea~V~kG~ 162 (201)
||++|..+++++||+|+|+||++||||+++||+.||+|+|+|+|+.|+++|+||.+||++|+|||+|+|||++||||+||
T Consensus 1 ~~~kA~~~~ir~SpkK~r~va~~IrG~~v~~Al~~L~~~pkkaa~~v~klL~sA~aNAe~n~gld~d~L~I~~~~v~~g~ 80 (110)
T 1i4j_A 1 MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDALEDRLYVKAAYVDEGP 80 (110)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHTTCBHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHHTSCCCGGGEEEEEEEEEEEE
T ss_pred CeEEEEeCCccCCHHHHHHHHHHHcCCcHHHHHHHHHHCCHHHHHHHHHHHHHHHHhHHHhcCCChhheEEEEEEECCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCcCCCCcccccccCceeEEEEEEecC
Q 028931 163 SAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 193 (201)
Q Consensus 163 ~lKRi~pRArGRa~~i~kr~sHItVvL~E~~ 193 (201)
+ ++||||||+++|++++|||+|+|+|++
T Consensus 81 ~---~~pRA~GRa~~i~k~~~HItvvl~e~~ 108 (110)
T 1i4j_A 81 A---VLPRARGRADIIKKRTSHITVILGEKH 108 (110)
T ss_dssp E---ECSCSSSCCCSCCEEEEEEEEEEEESS
T ss_pred e---EeecCCCCCcccccCCeeEEEEEEecC
Confidence 9 999999999999999999999999974
No 5
>3bbo_U Ribosomal protein L22; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=100.00 E-value=3.4e-41 Score=284.15 Aligned_cols=118 Identities=64% Similarity=1.005 Sum_probs=113.7
Q ss_pred CCcEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHhhCCCcchhHHHHHHHHHHhhchhcCCCCCCCeEEEEEEecC
Q 028931 81 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILELMPYRACYPIFKLIYSAAANGVHNMGFNEASLVIAKAEVNE 160 (201)
Q Consensus 81 ~~~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~fspKKaA~~V~KlL~sA~aNA~~~~gld~d~L~I~ea~V~k 160 (201)
+.++++|..+++++||+|+++||++||||+|++|+.||+|+|+|+|..|+++|+||++||++|+|+|+|+|||++||||+
T Consensus 28 ~~~eakA~~r~iRvSpkK~R~Vad~IRG~~V~eAl~iL~f~PkKaA~~V~KlLkSA~ANAe~n~GLD~d~L~I~~i~Vnk 107 (199)
T 3bbo_U 28 KCDEITTRGYSISMSVDKARRVIDQIRGRSYAETLMILELMPYRACYPIFKLIYSAAANASHNKQFNKANLIISKAEVNK 107 (199)
T ss_dssp --CCBCCCCSCCSSCSSSSSTTHHHHTTCBTTTTTTTGGGCCCTTHHHHHHHHHHHTTHHHHTSSCCSSSCEEEECCCCB
T ss_pred CCeEEEEEeCCccccHHHHHHHHHHHCCCcHHHHHHHHHHCCHhHHHHHHHHHHHHHHhHHhccCCChhheEEEEEEECC
Confidence 35789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCCcCCCCcccccccCceeEEEEEEecCCCCcc
Q 028931 161 ATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDDEY 198 (201)
Q Consensus 161 G~~lKRi~pRArGRa~~i~kr~sHItVvL~E~~~~~~~ 198 (201)
||++||++||||||+++|++++|||+|+|+|.+++++|
T Consensus 108 Gp~lKR~~pRArGRa~~I~KrtsHItVVL~E~~~~~~y 145 (199)
T 3bbo_U 108 GITLKKVKPRARGRSYMILRPTCHITIVLRDITHFDSY 145 (199)
T ss_dssp CCCCCCCCCSSSSCSCCCCCCCBCCCCEEECCCCCCCC
T ss_pred CCcccCCCCCCCCCCCcccCCCccEEEEEeeCCchHHH
Confidence 99999999999999999999999999999999988776
No 6
>1vq8_R 50S ribosomal protein L22P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.55.1.1 PDB: 1vq4_R* 1vq5_R* 1vq6_R* 1vq7_R* 1s72_R* 1vq9_R* 1vqk_R* 1vql_R* 1vqm_R* 1vqn_R* 1vqo_R* 1vqp_R* 1yhq_R* 1yi2_R* 1yij_R* 1yit_R* 1yjn_R* 1yjw_R* 2otj_R* 2otl_R* ...
Probab=100.00 E-value=2.6e-39 Score=264.10 Aligned_cols=116 Identities=22% Similarity=0.411 Sum_probs=109.3
Q ss_pred CCCcEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHhh------------------------------CCCcchhHH
Q 028931 80 NKKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILEL------------------------------MPYRACYPI 129 (201)
Q Consensus 80 ~~~~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~f------------------------------spKKaA~~V 129 (201)
++.++++|..+++++||+|+++||++||||++++|+.+|+| +|+|+|+.|
T Consensus 10 ~~~k~~kA~~~~~rvS~kk~r~va~~IrG~~v~~A~~~L~~V~~~k~~vPf~r~~~gvg~~~~~~~~~~gr~PkKaa~~i 89 (155)
T 1vq8_R 10 DPDTTAKAMLRERQMSFKHSKAIAREIKGKTAGEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRYPEKASKAF 89 (155)
T ss_dssp CGGGEEEEEEEEECSCHHHHHHHHHHHTTSBHHHHHHHHHHHHHTSSCEECSSSCTTCCBCTTCSSSSBEECCHHHHHHH
T ss_pred CCCceEEEEeCCccCcHHHHHHHHHHHcCCcHHHHHHHHHHHHhcceeccceeccCCCCccccccccccCCCcHHHHHHH
Confidence 34678999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHhhchhcCCCCCCCeEEEEEEecCCcccCCCCcCCCCcccccccCceeEEEEEEecCCCC
Q 028931 130 FKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMSLDD 196 (201)
Q Consensus 130 ~KlL~sA~aNA~~~~gld~d~L~I~ea~V~kG~~lKRi~pRArGRa~~i~kr~sHItVvL~E~~~~~ 196 (201)
+++|+||.+||+++ |||+|+|||+||+||+||++||++|||+||+++|++++|||+|+|+|.+.||
T Consensus 90 lklL~sA~aNAe~k-gld~d~L~I~~i~v~kg~~~kR~~pRA~GRa~~~~k~~~HI~vil~E~~~~~ 155 (155)
T 1vq8_R 90 LDLLENAVGNADHQ-GFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELILEEPEVED 155 (155)
T ss_dssp HHHHHHHHHHHHHT-TSCGGGSEEEEEEEEEEEEECCEEECGGGCEEECCEEEEEEEEEEECC----
T ss_pred HHHHHHHHHHHHHc-CCChhheEEEEEEECCCccccCCCCCCCCCCCceeCCCccEEEEEEecCCCC
Confidence 99999999999997 9999999999999999999999999999999999999999999999987665
No 7
>3j21_S 50S ribosomal protein L22P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=100.00 E-value=1.5e-37 Score=253.74 Aligned_cols=112 Identities=26% Similarity=0.360 Sum_probs=108.7
Q ss_pred CCcEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHhh-----------------------------CCCcchhHHHH
Q 028931 81 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILEL-----------------------------MPYRACYPIFK 131 (201)
Q Consensus 81 ~~~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~f-----------------------------spKKaA~~V~K 131 (201)
+.++++|..+++++||+|+++||++||||++++|+.+|+| +|+|+|+.|++
T Consensus 14 ~~~~akA~~~~~rvS~kk~r~va~~IrG~~v~~A~~~L~~V~~~k~~vPf~r~~~gvg~~~~~~~~~gr~PkKaa~~ilk 93 (155)
T 3j21_S 14 PKRMARASARDLRISPKLAVEVCRELRGMMLNDALRYLDDVIALKRPVPLKRYNDSQGHKPGKGFGPGRYPVKVAKAIKK 93 (155)
T ss_dssp HHHEEEEEEEEEESCHHHHHHHHHHHTTCBHHHHHHHHHHHHHTCSCEECCSSCTTCCBCCSSSCSBEECCHHHHHHHHH
T ss_pred CCeeEEEEeCCcccCHHHHHHHHHHHCCCcHHHHHHHHHHHHhcccceeeeeecCCCccccccCCCcCcCcHHHHHHHHH
Confidence 3578999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHhhchhcCCCCCCCeEEEEEEecCCcccCCCCcCCCCcccccccCceeEEEEEEecC
Q 028931 132 LIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 193 (201)
Q Consensus 132 lL~sA~aNA~~~~gld~d~L~I~ea~V~kG~~lKRi~pRArGRa~~i~kr~sHItVvL~E~~ 193 (201)
+|+||.+||++ +|||.|+|||+||+||+||++||++|||+||+++|++++|||+|+|+|.+
T Consensus 94 lL~sA~aNAe~-kgld~d~L~I~~i~vnkgp~~kR~~pRA~GR~~~~~k~~~HI~vil~E~~ 154 (155)
T 3j21_S 94 VLLNVKNNAVQ-KGLDPDKLKIIHIAAHKGPVLRGWYPRAFGRATPFNEQTTHIEVVVEEIR 154 (155)
T ss_dssp HHHHHHHHHHH-HTCCGGGCEEEEEEEEEEEEECCEEECSTTCEEECCEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHH-cCCChhheEEEEEEecCCCcccCCCCCCCCCCCceecCCccEEEEEEecc
Confidence 99999999997 69999999999999999999999999999999999999999999999875
No 8
>2zkr_r 60S ribosomal protein L17; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=6.6e-37 Score=255.88 Aligned_cols=112 Identities=21% Similarity=0.386 Sum_probs=106.4
Q ss_pred CCcEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHh----------h----------------------CCCcchhH
Q 028931 81 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILE----------L----------------------MPYRACYP 128 (201)
Q Consensus 81 ~~~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~----------f----------------------spKKaA~~ 128 (201)
+.++++|..+++++||+|+++||++||||++++|+.+|+ | +|+|+|+.
T Consensus 11 ~~k~akA~~~~lrvS~kk~r~va~~IrG~~v~~A~~~L~~V~~~k~~VPF~r~~~gvg~~~q~~~~~~~~GR~PkKaa~~ 90 (184)
T 2zkr_r 11 PTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSAEF 90 (184)
T ss_dssp TTTEEEEEECSCCSCHHHHHHHHHHHTTSBHHHHHHHHHHHHHTSSCEECSSSCTTCCBCCSTTSCSCSBEECCHHHHHH
T ss_pred CCeeEEEEecCccCcHHHHHHHHHHHcCCcHHHHHHHHHHHHhccccccceeccCCCcccccccccccccCCCcHHHHHH
Confidence 457899999999999999999999999999999999999 9 99999999
Q ss_pred HHHHHHHHHhhchhcCCCCCCCeEEEEEEecCCcccCCCCcCCCCcccccccCceeEEEEEEecC
Q 028931 129 IFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 193 (201)
Q Consensus 129 V~KlL~sA~aNA~~~~gld~d~L~I~ea~V~kG~~lKRi~pRArGRa~~i~kr~sHItVvL~E~~ 193 (201)
|+++|+||.+||+++ |||.|+|||+||+||+||++||++|||+||+++|++++|||+|+|+|.+
T Consensus 91 ilklLksA~aNAe~k-glD~d~L~I~~i~Vnkg~~~kR~~pRA~GRa~p~~k~~~HI~vil~E~~ 154 (184)
T 2zkr_r 91 LLHMLKNAESNAELK-GLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKE 154 (184)
T ss_dssp HHHHHHHHHHHHHHH-TSCTTTCEEEEEEEC-CCCEEEEEEETTTEEEEEEEC-CCEEEEEECC-
T ss_pred HHHHHHHHHHHHHHc-CCChhheEEEEEEECCCccCcCCCCCCCCCCCCccCCCceEEEEEEEcC
Confidence 999999999999986 9999999999999999999999999999999999999999999999874
No 9
>3iz5_V 60S ribosomal protein L17 (L22P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_V
Probab=100.00 E-value=9e-37 Score=252.54 Aligned_cols=112 Identities=23% Similarity=0.336 Sum_probs=108.0
Q ss_pred CCcEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHhh---------------------------------CCCcchh
Q 028931 81 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILEL---------------------------------MPYRACY 127 (201)
Q Consensus 81 ~~~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~f---------------------------------spKKaA~ 127 (201)
+.++++|..+++++||+|+++||++||||++++|+.+|+| +|+|+|+
T Consensus 11 ~~~~akA~~~~lrvS~kk~r~va~~IrG~~v~~A~~~L~~V~~~k~~VPf~r~~~gvg~~~q~~~~~~~~~gr~PkKaa~ 90 (171)
T 3iz5_V 11 PTKSSKAMGRDLRVHFKNTRETAFAIRKLPLGKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKSRHSNGQGRWPAKSAR 90 (171)
T ss_dssp TTTEEEEEEEEEESCHHHHHHHHHHSCSCCSHHHHHHHHHHHHTSSCEECSSCCSSCCCCSCCBTTBSCSCEECCHHHHH
T ss_pred CCeeEEEEeCCcccCHHHHHHHHHHHcCCcHHHHHHHHHHHHhcccccceeeecCCccccccccccccccccCCchHHHH
Confidence 4579999999999999999999999999999999999997 6999999
Q ss_pred HHHHHHHHHHhhchhcCCCCCCCeEEEEEEecCCcccCCCCcCCCCcccccccCceeEEEEEEecC
Q 028931 128 PIFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 193 (201)
Q Consensus 128 ~V~KlL~sA~aNA~~~~gld~d~L~I~ea~V~kG~~lKRi~pRArGRa~~i~kr~sHItVvL~E~~ 193 (201)
.|+++|+||.+||++ +|||.|+|||+||+||+||++||++||||||+++|++++|||+|+|+|.+
T Consensus 91 ~ilklL~sA~aNAe~-kglD~d~L~I~~i~vnkgp~~kR~~pRA~GRa~p~~k~~~HI~vil~E~~ 155 (171)
T 3iz5_V 91 FILDLLKNAESNAEV-KGLDVDTLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKE 155 (171)
T ss_dssp HHHHHHHHHHHHHHH-HTCCSSCCEEEEEEEEECCCBCCEEEETTTEEEECCBCEEEEEEEEETTH
T ss_pred HHHHHHHHHHHHHHH-cCCChhheEEEEEEeccCCcccCCCCCCCCCCCcccCCCccEEEEEeecC
Confidence 999999999999998 59999999999999999999999999999999999999999999999874
No 10
>4a17_Q RPL17, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Q 4a1c_Q 4a1e_Q
Probab=100.00 E-value=2.9e-36 Score=251.59 Aligned_cols=112 Identities=25% Similarity=0.406 Sum_probs=108.1
Q ss_pred CCcEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHhh--------------------------------CCCcchhH
Q 028931 81 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILEL--------------------------------MPYRACYP 128 (201)
Q Consensus 81 ~~~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~f--------------------------------spKKaA~~ 128 (201)
+.++++|..+++++||+|+++||++||||++++|+.+|+| +|+|+|++
T Consensus 13 p~k~akA~~~~lrvS~kk~reva~~IRG~~v~~A~~~L~~V~~~K~~vPfrrynggvg~~~q~k~~g~~~Gr~PkKaa~~ 92 (183)
T 4a17_Q 13 QAKAVKTSASDLRVHFKNTYEVVRAIKGLNLENAKRYLKAVIDRKRCIPFTRFTGCIGRTAQAHEFGRTQGRWPVKSVKV 92 (183)
T ss_dssp TTSEEEEEEEEECSCHHHHHHHHHHHTTSBHHHHHHHHHHHHTTSSCEECCSCCTTCCBCGGGGGTTCSBEECCHHHHHH
T ss_pred CCeeEEEEeCCccCchHHHHHHHHHHcCCcHHHHHHHHHHHHhcccccceeeecCCcccchhhhhcCCccCcCcHHHHHH
Confidence 4579999999999999999999999999999999999995 89999999
Q ss_pred HHHHHHHHHhhchhcCCCCCCCeEEEEEEecCCcccCCCCcCCCCcccccccCceeEEEEEEecC
Q 028931 129 IFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 193 (201)
Q Consensus 129 V~KlL~sA~aNA~~~~gld~d~L~I~ea~V~kG~~lKRi~pRArGRa~~i~kr~sHItVvL~E~~ 193 (201)
|+++|+||.+||+++ |||.|+|||+||+||+||++||++|||+||+++|++++|||+|+|+|.+
T Consensus 93 ilklLksA~aNAe~k-gLD~d~L~I~hi~Vnkgp~~kR~~pRA~GRa~pi~k~~~HIeiil~Eke 156 (183)
T 4a17_Q 93 ILGLLDNLSANAQAK-SLNTANLVIQHGQVNRAQKGRRRTYRAHGRINPYLNSGCHVEIFAQEVA 156 (183)
T ss_dssp HHHHHHHHHHHTTTT-TCCSTTEEEEEEEEEECCCEEEEEEETTTEEEEEEECCEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhc-CCChhheEEEEEEECCCCcccCcCccCCCCcCCccCCCCCEEEEEeecc
Confidence 999999999999975 9999999999999999999999999999999999999999999999875
No 11
>3u5e_P L20A, YL17, 60S ribosomal protein L17-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_I 2ww9_I 2wwb_I 3o5h_Q 3o58_Q 3u5i_P 4b6a_P 1s1i_N 3izc_V 3izs_V 3jyw_N
Probab=100.00 E-value=2.3e-36 Score=252.54 Aligned_cols=112 Identities=25% Similarity=0.378 Sum_probs=108.3
Q ss_pred CCcEEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHhh--------------------------------CCCcchhH
Q 028931 81 KKAEVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILEL--------------------------------MPYRACYP 128 (201)
Q Consensus 81 ~~~e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~f--------------------------------spKKaA~~ 128 (201)
+.++++|..+++++||+|+++||++||||++++|+.+|+| +|+|+|+.
T Consensus 11 ~~k~akA~~~~lrvS~kk~reva~~IRG~~v~~A~~~L~~V~~~k~~VPf~rf~~gvg~~~q~~~~g~~~GR~PkKaa~~ 90 (184)
T 3u5e_P 11 PAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPAKSVKF 90 (184)
T ss_dssp GGGEEEEEEEEECSCHHHHHHHHTTTTTCBHHHHHHHHHHHHTTSSCEECCSSCTTCCCCGGGGGGTCSCEECCHHHHHH
T ss_pred CCceEEEEeCCccccHHHHHHHHHHHcCCcHHHHHHHHHHHHhcccccceeeecCCCcccchhhccCCccCCCchHHHHH
Confidence 3578999999999999999999999999999999999995 89999999
Q ss_pred HHHHHHHHHhhchhcCCCCCCCeEEEEEEecCCcccCCCCcCCCCcccccccCceeEEEEEEecC
Q 028931 129 IFKLIYSAAANGVHNMGFNEASLVIAKAEVNEATSAKRPRPKAQGRVHMIKRPTCHITVVLRDMS 193 (201)
Q Consensus 129 V~KlL~sA~aNA~~~~gld~d~L~I~ea~V~kG~~lKRi~pRArGRa~~i~kr~sHItVvL~E~~ 193 (201)
|+++|+||.+||++ +|||.|+|||+||+||+||++||++|||+||+++|++++|||+|+|+|.+
T Consensus 91 ilklLksA~aNAe~-kgLD~d~L~I~~i~Vnkgp~~kR~~pRA~GRa~p~~k~~~HI~vil~E~e 154 (184)
T 3u5e_P 91 VQGLLQNAAANAEA-KGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKE 154 (184)
T ss_dssp HHHHHHHHHHHHHH-TTCCTTTEEEEEEEEEECCCEEEEEEEGGGEEEEEEECCEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHH-cCCChhheEEEEEEECCCCcccCCCCCCCCCCCcccCCCccEEEEEeecc
Confidence 99999999999997 69999999999999999999999999999999999999999999999875
No 12
>3lvl_A NIFU-like protein; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 3.00A {Escherichia coli} PDB: 2l4x_A 2kqk_A 1q48_A 1r9p_A 1wfz_A
Probab=56.19 E-value=24 Score=26.77 Aligned_cols=59 Identities=20% Similarity=0.158 Sum_probs=45.5
Q ss_pred EEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHH--------HhhCCC--cchhHHHHHHHHHHhhchh
Q 028931 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMI--------LELMPY--RACYPIFKLIYSAAANGVH 142 (201)
Q Consensus 84 e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~q--------L~fspK--KaA~~V~KlL~sA~aNA~~ 142 (201)
+++..+...-+|--=+-.++++|.|++++||..+ |.|.|. +.|....+.|+.|+.+.+.
T Consensus 56 d~~f~~~GCais~ASaS~~te~i~Gkt~~ea~~i~~~~i~~~L~l~p~r~~Ca~La~~Al~~Al~~y~~ 124 (129)
T 3lvl_A 56 DARFKTYGCGSAIASSSLVTEWVKGKSLDEAQAIKNTDIAEELELPPVKIHCSILAEDAIKAAIADYKS 124 (129)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHHTTCCHHHHHTCCHHHHHHHHTCCGGGGHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCCccchhHHHHHHHHHHHHHHHHHH
Confidence 5677777778888888999999999999999643 445553 4456667899999988764
No 13
>2z7e_A ISCU protein, NIFU-like protein; iron-sulfur cluster, iron, biosynthesis, [2Fe-2S], asymmetric trimer, three conserved Cys; 2.30A {Aquifex aeolicus}
Probab=46.70 E-value=31 Score=27.28 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=47.4
Q ss_pred EEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHH--------Hh-hCC--CcchhHHHHHHHHHHhhchhc
Q 028931 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMI--------LE-LMP--YRACYPIFKLIYSAAANGVHN 143 (201)
Q Consensus 84 e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~q--------L~-fsp--KKaA~~V~KlL~sA~aNA~~~ 143 (201)
.++..+...-+|--=+-.++.+|+|++++||..+ |. +.| .+.|..-.+.|+.|+.+++..
T Consensus 55 d~~F~~~GCais~ASaS~mte~v~Gkt~~EA~~i~~~~i~e~Lg~l~p~R~~Ca~La~~Al~~Al~~y~~k 125 (157)
T 2z7e_A 55 DVRFKTFGCGSAIAVSSMLTEMVKGKPIQYALNLTYKDIFEELGGLPPQKIHCTNLGLETLHVAIKDYLMK 125 (157)
T ss_dssp EEEEEEESCTTHHHHHHHHHHHHTTSBHHHHHHCCHHHHHHHHTCCCCSSCCTTCCHHHHHHHHHHHHHHT
T ss_pred EEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHhccHHHHhcccCcchhHhHHHHHHHHHHHHHHHHHh
Confidence 5777778888888889999999999999999864 32 334 466777789999999888654
No 14
>4eb5_C NIFU protein (NIFU-1); scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_C*
Probab=33.52 E-value=29 Score=27.41 Aligned_cols=59 Identities=14% Similarity=0.093 Sum_probs=44.9
Q ss_pred EEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHH--------Hh-hCCC--cchhHHHHHHHHHHhhchh
Q 028931 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMI--------LE-LMPY--RACYPIFKLIYSAAANGVH 142 (201)
Q Consensus 84 e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~q--------L~-fspK--KaA~~V~KlL~sA~aNA~~ 142 (201)
.++..+...-+|--=+-.++.+|.|++++||..+ |. +.|. +.|..-.+.|+.|+.+...
T Consensus 50 D~~F~g~GCais~ASaS~mtelv~GKtleEA~~i~~~~i~~~L~glpp~Ri~CA~La~~AL~~Al~~y~~ 119 (153)
T 4eb5_C 50 DIKFQTFGCAAAIATSSMATEMAKGKTIEEALKITRDAVAEALGGLPKQKMHCSNLAADALRRAIVDYFR 119 (153)
T ss_dssp EEEEEEESCHHHHHHHHHHHHHHTTCBHHHHTTCCHHHHHHHHTCCCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeCcHHHHHHHHHHHHHHcCCCHHHHHHhhHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 5667777778888888999999999999999733 21 2343 5566667999999998753
No 15
>3lyv_A Ribosome-associated factor Y; ribosomal protein S30AE family, structural genomics, PSI-2, structure initiative; 2.70A {Streptococcus pyogenes}
Probab=28.90 E-value=25 Score=24.30 Aligned_cols=16 Identities=25% Similarity=0.353 Sum_probs=12.7
Q ss_pred hCCCHHHHHHHHhhCC
Q 028931 107 RGRSYEETLMILELMP 122 (201)
Q Consensus 107 RGk~v~eAi~qL~fsp 122 (201)
+=|+++||+.||+...
T Consensus 12 kpMsveEAv~qMel~g 27 (66)
T 3lyv_A 12 KPMDVEEARLQMELLG 27 (66)
T ss_dssp CEECHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHcCC
Confidence 3478999999998653
No 16
>3ka5_A Ribosome-associated protein Y (PSRP-1); structural genomics, PSI-2, protein structure initiative; 1.80A {Clostridium acetobutylicum}
Probab=27.64 E-value=25 Score=24.23 Aligned_cols=16 Identities=38% Similarity=0.538 Sum_probs=12.8
Q ss_pred HhCCCHHHHHHHHhhC
Q 028931 106 IRGRSYEETLMILELM 121 (201)
Q Consensus 106 IRGk~v~eAi~qL~fs 121 (201)
++=|+++||+.||+..
T Consensus 10 ~kpMsveEAv~qmel~ 25 (65)
T 3ka5_A 10 IKPMSEEEAVLEMELL 25 (65)
T ss_dssp CSCBCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhC
Confidence 3458999999999854
No 17
>3k2t_A LMO2511 protein; listeria monocytogenes,binding, structural genomics, PSI-2, protein structure initiative; 2.40A {Listeria monocytogenes}
Probab=26.79 E-value=28 Score=23.21 Aligned_cols=16 Identities=19% Similarity=0.455 Sum_probs=12.7
Q ss_pred HhCCCHHHHHHHHhhC
Q 028931 106 IRGRSYEETLMILELM 121 (201)
Q Consensus 106 IRGk~v~eAi~qL~fs 121 (201)
++=|+++||+.||+..
T Consensus 10 ~kpmsveEAv~qmel~ 25 (57)
T 3k2t_A 10 LKPMDSEEAVLQMNLL 25 (57)
T ss_dssp -CCBCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHhC
Confidence 4568999999999854
No 18
>2qq4_A Iron-sulfur cluster biosynthesis protein ISCU; zinc binding, iron-sulfur cluster binding, three conserved Cys, three beta strands; 1.85A {Thermus thermophilus}
Probab=24.45 E-value=72 Score=24.31 Aligned_cols=36 Identities=11% Similarity=0.246 Sum_probs=31.1
Q ss_pred EEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHh
Q 028931 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILE 119 (201)
Q Consensus 84 e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~ 119 (201)
+++..+...-+|--=.-.++.+|+|++++||.....
T Consensus 56 d~~f~~~GCais~ASaS~~te~i~Gkt~~ea~~i~~ 91 (138)
T 2qq4_A 56 DIRFQGQGCAISTASASLMTEAVKGKKVAEALELSR 91 (138)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTSBHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 567777788888888999999999999999998764
No 19
>1xjs_A NIFU-like protein; SR17, structure, autostructure, iron-sulfur, zinc, northeast structural genomics consortium, NESG; NMR {Bacillus subtilis} SCOP: d.224.1.2 PDB: 2azh_A
Probab=24.37 E-value=74 Score=24.56 Aligned_cols=36 Identities=14% Similarity=0.218 Sum_probs=31.4
Q ss_pred EEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHh
Q 028931 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILE 119 (201)
Q Consensus 84 e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~ 119 (201)
+++..+...-+|--=+-.++.+|+|++++||..+..
T Consensus 58 d~~f~~~GCais~ASaS~mte~v~Gkt~~Ea~~i~~ 93 (147)
T 1xjs_A 58 DAKFEGEGCSISMASASMMTQAIKGKDIETALSMSK 93 (147)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHTTSBHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 577778888888888999999999999999998754
No 20
>1su0_B NIFU like protein ISCU; structural genomics, BSGC structure funded by NI protein structure initiative, PSI; 2.30A {Streptococcus pyogenes} SCOP: d.224.1.2
Probab=22.69 E-value=89 Score=24.47 Aligned_cols=36 Identities=19% Similarity=0.311 Sum_probs=31.1
Q ss_pred EEEEEeCccccCHHHHHHHHHHHhCCCHHHHHHHHh
Q 028931 84 EVSASARYLHMSAHKVRRVIDQIRGRSYEETLMILE 119 (201)
Q Consensus 84 e~~A~~r~iriSpkKlr~Var~IRGk~v~eAi~qL~ 119 (201)
+++......-+|--=.-.++.+|+|++++||..+..
T Consensus 57 d~~F~~~GCais~ASaS~mte~v~Gkt~~Ea~~i~~ 92 (159)
T 1su0_B 57 DIAFAGNGCTISTASSSMMTDAVIGKSKEEALALAD 92 (159)
T ss_dssp EEEEEEECCHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 577777788888888899999999999999998754
Done!