Query         028932
Match_columns 201
No_of_seqs    119 out of 883
Neff          8.3 
Searched_HMMs 29240
Date          Mon Mar 25 07:23:15 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028932.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028932hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1yyc_A LEA protein, putative l  98.5 1.4E-06 4.7E-11   66.7  10.5   99   49-157    43-143 (174)
  2 1xo8_A AT1G01470; structural g  98.4 4.3E-07 1.5E-11   68.0   7.1  101   49-159    20-122 (151)
  3 3but_A Uncharacterized protein  98.3 1.1E-05 3.6E-10   59.3  11.9   73   70-143    16-89  (136)
  4 2l0d_A Cell surface protein; s  60.9      38  0.0013   23.3   8.0   54   51-112     3-56  (114)
  5 2oss_A HUNK1 protein, bromodom  52.2     9.2 0.00032   26.8   2.6   28    1-28      2-29  (127)
  6 2knc_B Integrin beta-3; transm  44.2     7.8 0.00027   25.1   1.1   20   24-43     13-32  (79)
  7 2l6w_A Beta-type platelet-deri  47.3     5.6 0.00019   22.1   0.0    6   48-53     33-38  (39)
  8 3me0_B PAPG protein; immunoglo  39.0      99  0.0034   21.7   7.4   84   47-131    10-109 (128)
  9 2xk0_A Polycomb protein PCL; t  35.0      13 0.00046   23.3   1.0   17   86-102    43-60  (69)
 10 2k9j_B Integrin beta-3; transm  32.0      17 0.00058   20.6   1.0   20   24-43     12-31  (43)
 11 3um7_A Potassium channel subfa  30.8      23 0.00078   28.9   2.0    8   41-48     49-56  (309)
 12 3kdp_B Sodium/potassium-transp  26.3     8.7  0.0003   31.1  -1.2   47   19-66     14-63  (286)
 13 2lk9_A Bone marrow stromal ant  24.2      44  0.0015   17.8   1.7    6   31-36     14-19  (35)
 14 2kj1_A BM2 protein; cytoplasmi  21.9      19 0.00064   22.8  -0.0   15   71-85      7-21  (89)
 15 2l8s_A Integrin alpha-1; trans  20.8      38  0.0013   20.2   1.2   19   24-43     13-31  (54)
 16 2knc_A Integrin alpha-IIB; tra  20.1      41  0.0014   20.0   1.2   19   24-43     16-34  (54)

No 1  
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=98.47  E-value=1.4e-06  Score=66.65  Aligned_cols=99  Identities=18%  Similarity=0.166  Sum_probs=78.1

Q ss_pred             CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeeeee-ceeecCCceeEEEEEE
Q 028932           49 KRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLV-PFHQPTRNVTRLDAKI  127 (201)
Q Consensus        49 ~~P~~~v~~~~v~~~~~~~~~l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~t~~v~~~l  127 (201)
                      +.|++++.++++.+++.    ..++|.+.++++|||. ..+.+..++.++.-+|.+++++..+ ++..++++++.+.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l----~~~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vpv  117 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTR----DGVDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPV  117 (174)
T ss_dssp             CCCEEEEEEEEEEEECS----SSEEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEEE
T ss_pred             CCCEEEEEEeEEecccc----ceEEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEEE
Confidence            56999999999998876    5588999999999995 9999999999999999999999875 5889999999999888


Q ss_pred             EEeeeecChHHHHHHHhhh-ccceEEEEEEE
Q 028932          128 LAQNVAISSSIAKDLKLEK-TSGEIELAVRV  157 (201)
Q Consensus       128 ~~~~~~l~~~~~~~l~~d~-~~g~v~~~v~v  157 (201)
                      +....    + ..++..+. ..+.++.++++
T Consensus       118 ~v~~~----~-l~~~~~~l~~~~~i~Y~L~g  143 (174)
T 1yyc_A          118 KVAYS----I-AVSLMKDMCTDWDIDYQLDI  143 (174)
T ss_dssp             EESHH----H-HHHTCCCCCSSEEECEEEEE
T ss_pred             EEEHH----H-HHHHHHhcCCCCccceEEEE
Confidence            77532    1 22233344 33446665543


No 2  
>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1
Probab=98.45  E-value=4.3e-07  Score=68.03  Aligned_cols=101  Identities=15%  Similarity=0.208  Sum_probs=77.8

Q ss_pred             CCCEEEEeeeEEeeeecCCCceeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeeeee-ceeecCCceeEEEEEE
Q 028932           49 KRPVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLV-PFHQPTRNVTRLDAKI  127 (201)
Q Consensus        49 ~~P~~~v~~~~v~~~~~~~~~l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~vp-~f~q~~~~t~~v~~~l  127 (201)
                      +.|++++.++++.+++.    ..++|.+.++++|||. ..+.+.+++.+++-+|.+++++..+ ++..++++++.+.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~----~~~~~~~~l~V~NPN~-~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vpv   94 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNR----DSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPV   94 (151)
T ss_dssp             CSCCCBCSEEEECCCTT----TEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECC
T ss_pred             CCCEEEEEEeEEeccCc----ceeEEEEEEEEECCCC-CCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEEE
Confidence            56999999999887765    5678999999999995 9999999999999999999999775 5889999999998887


Q ss_pred             EEeeeecChHHHHHHHhhh-ccceEEEEEEEEE
Q 028932          128 LAQNVAISSSIAKDLKLEK-TSGEIELAVRVKA  159 (201)
Q Consensus       128 ~~~~~~l~~~~~~~l~~d~-~~g~v~~~v~v~~  159 (201)
                      +.....+     .++..+. ..+.++.+++.+.
T Consensus        95 ~v~~~~l-----~~~~~~l~~~~~i~Y~l~g~l  122 (151)
T 1xo8_A           95 VVPYSIL-----FNLARDVGVDWDIDYELQIGL  122 (151)
T ss_dssp             CEEHHHH-----HHHHHHHHHHSEEEEEEEEEE
T ss_pred             EEEHHHH-----HHHHHhcccCCcccEEEEEEE
Confidence            7663222     2222232 3456777664443


No 3  
>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}
Probab=98.33  E-value=1.1e-05  Score=59.31  Aligned_cols=73  Identities=11%  Similarity=0.081  Sum_probs=63.0

Q ss_pred             eeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeee-eeceeecCCceeEEEEEEEEeeeecChHHHHHHH
Q 028932           70 LNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFST-LVPFHQPTRNVTRLDAKILAQNVAISSSIAKDLK  143 (201)
Q Consensus        70 l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~-vp~f~q~~~~t~~v~~~l~~~~~~l~~~~~~~l~  143 (201)
                      -.+.+.+.+.+.|||. ..+.++.++.+++.+|.++|++. ...+..++.+++.+.+.+..+...+.+...+.++
T Consensus        16 ~~t~~~~~l~V~NPN~-~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~~~~hi~   89 (136)
T 3but_A           16 SQTEIVALAKVRNEDV-VPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIA   89 (136)
T ss_dssp             SEEEEEEEEEEECCSS-SCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTTHHHHHHH
T ss_pred             cEEEEEEEEEEeCCCC-cceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHHHHHHHhh
Confidence            4578999999999995 99999999999999999999986 5789999999999999999987777666555554


No 4  
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=60.85  E-value=38  Score=23.31  Aligned_cols=54  Identities=19%  Similarity=0.087  Sum_probs=34.9

Q ss_pred             CEEEEeeeEEeeeecCCCceeEEEEEEEEEeCCCCeeeEEEeceEEEEEECCeEEeeeeeec
Q 028932           51 PVYTIEDGSVHDFNVNNNHLNSTFGFVIRAHNPNGRASIYYDSIEVSVAYDDQNVAFSTLVP  112 (201)
Q Consensus        51 P~~~v~~~~v~~~~~~~~~l~~~~~~~l~v~NPN~~~~i~y~~~~~~v~Y~g~~lg~~~vp~  112 (201)
                      |+..+.+++     .+...-+-...+++.++|......   ....+.++.+|..++...+++
T Consensus         3 PDL~vt~it-----P~~~~~~~~~ti~atVkN~G~~~a---~~~~V~ly~~g~~v~t~~v~~   56 (114)
T 2l0d_A            3 PDLVPVSLT-----PVTVVPNTVNTMTATIENQGNKDS---TSFNVSLLVDGIVVDTQTVTS   56 (114)
T ss_dssp             CCEEEEEEE-----CSEECTTSEEEEEEEEEECSSSCB---CCEEEEEEETTEEEEEEEESC
T ss_pred             CCcEEEecc-----CCCcCCCCeEEEEEEEEECCCCCC---CCEEEEEEECCEEEcceeccc
Confidence            556666552     222234556688889999875332   557788888898888776654


No 5  
>2oss_A HUNK1 protein, bromodomain-containing protein 4; BRD4, structural genomics consortium, SGC, signaling protein; 1.35A {Homo sapiens} PDB: 2yel_A* 3mxf_A* 3p5o_A* 3svf_A* 3svg_A* 3u5j_A* 3u5k_A* 3u5l_A* 3uvw_A* 3uvx_A* 3uvy_A* 3uw9_A* 3zyu_A* 4a9l_A* 4e96_A* 3jvj_A 3jvk_A* 3muk_A* 3mul_A* 2nxb_A ...
Probab=52.21  E-value=9.2  Score=26.82  Aligned_cols=28  Identities=21%  Similarity=0.361  Sum_probs=18.9

Q ss_pred             CCCCCCccccCCCCCCCCcchhhHHHHH
Q 028932            1 MASNPTATQLTAAPAKRTGLVRCIAIVL   28 (201)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~   28 (201)
                      |.||||....+.++.|...-+..++-.+
T Consensus         2 ~~~p~p~~~~~~~~~r~~~~l~~~~~~i   29 (127)
T 2oss_A            2 MNPPPPETSNPNKPKRQTNQLQYLLRVV   29 (127)
T ss_dssp             CCCCCCCCCCTTSCCCCCHHHHHHHHTH
T ss_pred             CCCCCCCcCCcCcCcccHHHHHHHHHHH
Confidence            5677777777777777777676655443


No 6  
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=44.24  E-value=7.8  Score=25.06  Aligned_cols=20  Identities=30%  Similarity=0.853  Sum_probs=12.5

Q ss_pred             HHHHHHHHHHHHHHheeeeE
Q 028932           24 IAIVLLALIVLAGIVVLIIW   43 (201)
Q Consensus        24 ~~~~~~~l~~l~~i~~~i~~   43 (201)
                      ++.++++.++++|++++++|
T Consensus        13 Iv~gvi~gilliGllllliw   32 (79)
T 2knc_B           13 VLLSVMGAILLIGLAALLIW   32 (79)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHH
Confidence            34445555666777777666


No 7  
>2l6w_A Beta-type platelet-derived growth factor receptor; transmembrane helix, receptor tyrosine kinase, heptad repeat membrane protein; NMR {Homo sapiens}
Probab=47.33  E-value=5.6  Score=22.06  Aligned_cols=6  Identities=50%  Similarity=1.060  Sum_probs=3.7

Q ss_pred             CCCCEE
Q 028932           48 PKRPVY   53 (201)
Q Consensus        48 P~~P~~   53 (201)
                      -++|++
T Consensus        33 ~qKPrY   38 (39)
T 2l6w_A           33 QKKPRY   38 (39)
Confidence            366765


No 8  
>3me0_B PAPG protein; immunoglobulin pilin chaperone, chaperone, fimbrium, immunog domain; HET: MSE; 2.03A {Escherichia coli} PDB: 2wmp_B
Probab=38.97  E-value=99  Score=21.72  Aligned_cols=84  Identities=11%  Similarity=0.166  Sum_probs=47.3

Q ss_pred             eCCCCEEEEeeeEEeeeecCCCcee--------EEEEEEEEE-eCC----C--CeeeEEEe-ceEEEEEECCeEEeeeee
Q 028932           47 KPKRPVYTIEDGSVHDFNVNNNHLN--------STFGFVIRA-HNP----N--GRASIYYD-SIEVSVAYDDQNVAFSTL  110 (201)
Q Consensus        47 rP~~P~~~v~~~~v~~~~~~~~~l~--------~~~~~~l~v-~NP----N--~~~~i~y~-~~~~~v~Y~g~~lg~~~v  110 (201)
                      ||..|.+.++--.++.=++.+.+.+        ...++.+.+ .|-    |  .++.+--. +....++-+|+..++..+
T Consensus        10 ~~~~~~l~IdHG~ls~~~a~Gnt~~~~isV~Ct~p~~Vki~lt~~~~p~~~~~~~f~V~L~ngl~S~l~lNG~~~~e~~~   89 (128)
T 3me0_B           10 RPSAQSLEIKHGDLSINSANNHYAAQTLSVSCDVPANIRFMLLRNTTPTYSHGKKFSVGLGHGWDSIVSVNGVDTGETTM   89 (128)
T ss_dssp             EECCSCCEEECCCSSSSCCSSCEEEEEEEEEESSCEEEEEEEEECSCCSSCCTTSCEEEEETTEEEEEEETTBCSSEEEE
T ss_pred             CCCCCceecccceechhhcCCCEEeeEEEEEeCCCceEEEEEecCCcccccccCceEEecCCCeEEEEEECCeeccceeE
Confidence            6777888777666554444333211        122333443 321    1  23444443 788888889998888877


Q ss_pred             eceeecCCceeEEEEEEEEee
Q 028932          111 VPFHQPTRNVTRLDAKILAQN  131 (201)
Q Consensus       111 p~f~q~~~~t~~v~~~l~~~~  131 (201)
                       .|+..+..+-.+..+|.+..
T Consensus        90 -~~~~~~s~tvtV~S~L~g~~  109 (128)
T 3me0_B           90 -RWYKAGTQNLTIGSRLYGES  109 (128)
T ss_dssp             -EESSSEEEEEEEEEEEEECS
T ss_pred             -EEEecCCcEEEEEEEEecCc
Confidence             44444444566666675543


No 9  
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=35.03  E-value=13  Score=23.26  Aligned_cols=17  Identities=24%  Similarity=0.168  Sum_probs=7.8

Q ss_pred             eeeEEEe-ceEEEEEECC
Q 028932           86 RASIYYD-SIEVSVAYDD  102 (201)
Q Consensus        86 ~~~i~y~-~~~~~v~Y~g  102 (201)
                      ..-++|+ +++..+.+++
T Consensus        43 ~ClV~FeD~S~~Wv~~kd   60 (69)
T 2xk0_A           43 QYLIRFDDQSEQWCEPDK   60 (69)
T ss_dssp             CEEEEETTCCEEEECTTT
T ss_pred             eEEEEecCCcceeeeHHH
Confidence            3455553 3444444443


No 10 
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=32.01  E-value=17  Score=20.55  Aligned_cols=20  Identities=30%  Similarity=0.853  Sum_probs=11.9

Q ss_pred             HHHHHHHHHHHHHHheeeeE
Q 028932           24 IAIVLLALIVLAGIVVLIIW   43 (201)
Q Consensus        24 ~~~~~~~l~~l~~i~~~i~~   43 (201)
                      +..+++..++++|++++++|
T Consensus        12 Iv~gvi~~ivliGl~lLliw   31 (43)
T 2k9j_B           12 VLLSVMGAILLIGLAALLIW   31 (43)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHH
Confidence            33444455666777776665


No 11 
>3um7_A Potassium channel subfamily K member 4; potassium ION channel, metal transport; 3.31A {Homo sapiens}
Probab=30.81  E-value=23  Score=28.95  Aligned_cols=8  Identities=13%  Similarity=0.430  Sum_probs=3.1

Q ss_pred             eeEEEEeC
Q 028932           41 IIWLVVKP   48 (201)
Q Consensus        41 i~~lv~rP   48 (201)
                      +++.+=+|
T Consensus        49 vF~~LE~~   56 (309)
T 3um7_A           49 VFRALEQP   56 (309)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhCC
Confidence            34433344


No 12 
>3kdp_B Sodium/potassium-transporting ATPase subunit beta; alpha helical, heterotrimeric membrane protein complex, ATP- hydrolase, ION transport, magnesium; HET: CLR; 3.50A {Sus scrofa} PDB: 3n2f_B* 3n23_B*
Probab=26.33  E-value=8.7  Score=31.14  Aligned_cols=47  Identities=17%  Similarity=0.245  Sum_probs=25.6

Q ss_pred             cchhhHHHHHHHHHHHHHHheeeeE---EEEeCCCCEEEEeeeEEeeeecC
Q 028932           19 GLVRCIAIVLLALIVLAGIVVLIIW---LVVKPKRPVYTIEDGSVHDFNVN   66 (201)
Q Consensus        19 ~~~~~~~~~~~~l~~l~~i~~~i~~---lv~rP~~P~~~v~~~~v~~~~~~   66 (201)
                      +|...++.=+++-.+|+|+.++.+|   ..+.|+.|+++ ++..-+++.+.
T Consensus        14 sW~~IllFYliFY~~La~lFa~~m~v~l~TLd~~~Pkyq-d~~~~PGL~~~   63 (286)
T 3kdp_B           14 SWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQ-DRVAPPGLTQI   63 (286)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHGGGSCSCSSSCSCC-TTTCSCCCCBS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCccc-CCCCCCcceec
Confidence            4555443322233333444444333   34789999999 66655666653


No 13 
>2lk9_A Bone marrow stromal antigen 2; membrane, micelle, antiviral protein-immune system complex; NMR {Homo sapiens}
Probab=24.19  E-value=44  Score=17.78  Aligned_cols=6  Identities=17%  Similarity=0.462  Sum_probs=2.2

Q ss_pred             HHHHHH
Q 028932           31 LIVLAG   36 (201)
Q Consensus        31 l~~l~~   36 (201)
                      ++++++
T Consensus        14 LLviV~   19 (35)
T 2lk9_A           14 LLIIVI   19 (35)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            333333


No 14 
>2kj1_A BM2 protein; cytoplasmic domain, coiled coil, transport protein; NMR {Influenza b virus}
Probab=21.93  E-value=19  Score=22.77  Aligned_cols=15  Identities=27%  Similarity=0.426  Sum_probs=3.5

Q ss_pred             eEEEEEEEEEeCCCC
Q 028932           71 NSTFGFVIRAHNPNG   85 (201)
Q Consensus        71 ~~~~~~~l~v~NPN~   85 (201)
                      .-..++.++++|||+
T Consensus         7 krgv~lki~ir~pnk   21 (89)
T 2kj1_A            7 KRGVNMKIRIKGPNK   21 (89)
T ss_dssp             -----------CCCH
T ss_pred             hccCceEEEecCCCH
Confidence            345678899999995


No 15 
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=20.84  E-value=38  Score=20.16  Aligned_cols=19  Identities=21%  Similarity=0.600  Sum_probs=9.3

Q ss_pred             HHHHHHHHHHHHHHheeeeE
Q 028932           24 IAIVLLALIVLAGIVVLIIW   43 (201)
Q Consensus        24 ~~~~~~~l~~l~~i~~~i~~   43 (201)
                      +.+++..+ ++++++++++|
T Consensus        13 i~svl~GL-LLL~Lii~~Lw   31 (54)
T 2l8s_A           13 LLSAFAGL-LLLMLLILALW   31 (54)
T ss_dssp             HHHHHHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHH
Confidence            33344333 44455556666


No 16 
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=20.10  E-value=41  Score=20.02  Aligned_cols=19  Identities=42%  Similarity=0.676  Sum_probs=9.2

Q ss_pred             HHHHHHHHHHHHHHheeeeE
Q 028932           24 IAIVLLALIVLAGIVVLIIW   43 (201)
Q Consensus        24 ~~~~~~~l~~l~~i~~~i~~   43 (201)
                      +.+++..+ ++++++++++|
T Consensus        16 i~svl~GL-llL~li~~~Lw   34 (54)
T 2knc_A           16 LVGVLGGL-LLLTILVLAMW   34 (54)
T ss_dssp             HHHHHHHH-HHHHHHHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHH
Confidence            34344433 44455556666


Done!