Query 028938
Match_columns 201
No_of_seqs 164 out of 1278
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 07:33:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028938.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028938hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i0o_A Ser/Thr phosphatase; be 100.0 6.1E-31 2.1E-35 219.8 19.9 150 29-181 20-188 (304)
2 2p8e_A PPM1B beta isoform vari 100.0 6.9E-31 2.3E-35 219.8 18.6 153 29-182 21-191 (307)
3 3qn1_B Protein phosphatase 2C 100.0 5.5E-31 1.9E-35 223.1 17.1 152 32-184 14-212 (337)
4 3kdj_B Protein phosphatase 2C 100.0 1.4E-30 4.9E-35 218.7 16.4 150 31-184 8-183 (316)
5 2iq1_A Protein phosphatase 2C 100.0 4.6E-30 1.6E-34 211.4 18.5 149 30-182 6-161 (274)
6 2isn_A NYSGXRC-8828Z, phosphat 100.0 2.7E-30 9.3E-35 221.0 17.1 149 29-182 10-221 (364)
7 1a6q_A Phosphatase 2C; catalyt 100.0 2.6E-30 8.7E-35 222.4 16.2 152 30-182 20-184 (382)
8 2i44_A Serine-threonine phosph 100.0 4.2E-30 1.4E-34 216.2 15.0 151 30-182 20-199 (324)
9 2irm_A Mitogen-activated prote 100.0 3.9E-30 1.3E-34 219.5 13.6 143 37-182 25-217 (358)
10 2j4o_A Mitogen-activated prote 100.0 4E-30 1.4E-34 222.5 12.5 158 20-180 15-225 (401)
11 4da1_A Protein phosphatase 1K, 100.0 8.1E-29 2.8E-33 213.5 17.3 149 30-182 120-275 (389)
12 3d8k_A PP2C, protein phosphata 100.0 1.4E-29 4.9E-34 217.4 10.4 149 29-185 10-216 (377)
13 2pnq_A [pyruvate dehydrogenase 100.0 9.2E-28 3.1E-32 211.1 16.7 147 30-178 35-259 (467)
14 1txo_A Putative bacterial enzy 99.9 1.9E-25 6.4E-30 179.6 15.0 130 30-167 3-136 (237)
15 2pk0_A Serine/threonine protei 99.9 2.5E-26 8.5E-31 186.1 9.9 133 31-166 5-143 (250)
16 2j82_A TPPHA, protein serine-t 99.9 2E-25 6.8E-30 179.6 14.8 130 32-166 1-139 (240)
17 2jfr_A Ser-Thr phosphatase MSP 99.9 1.4E-24 4.7E-29 174.2 12.3 125 30-167 4-133 (234)
18 3rnr_A Stage II sporulation E 99.9 9.6E-21 3.3E-25 150.1 13.7 103 61-167 8-114 (211)
19 3t91_A Stage II sporulation pr 99.2 7E-11 2.4E-15 94.6 11.2 125 29-166 5-134 (242)
20 3pu9_A Protein serine/threonin 99.2 2.2E-09 7.4E-14 86.3 16.6 128 29-166 8-137 (242)
21 3f79_A Probable two-component 98.8 3.1E-07 1.1E-11 73.8 15.3 128 30-166 36-170 (255)
22 3zt9_A Serine phosphatase; hyd 98.7 1.9E-06 6.3E-11 66.7 17.1 118 30-164 2-121 (193)
23 3ke6_A Protein RV1364C/MT1410; 97.4 0.0087 3E-07 51.0 15.9 125 30-166 34-162 (399)
24 3eq2_A Probable two-component 93.6 1 3.5E-05 37.5 11.9 123 31-166 176-309 (394)
25 1hq0_A CNF1, cytotoxic necroti 28.0 44 0.0015 26.9 3.2 23 123-147 144-166 (295)
26 1b33_N Phycobilisome 7.8 KD li 26.1 39 0.0013 21.0 2.0 16 167-182 37-52 (67)
27 2h3o_A MERF; membrane protein, 25.6 15 0.0005 22.5 0.0 7 3-9 8-14 (61)
No 1
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=99.97 E-value=6.1e-31 Score=219.75 Aligned_cols=150 Identities=30% Similarity=0.476 Sum_probs=127.6
Q ss_pred CCceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccC-CCCHHHHHHHHH
Q 028938 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF-WVDPQRSISKAY 107 (201)
Q Consensus 29 ~~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~-~~~~~~~l~~a~ 107 (201)
...+.+++.+++|.| +.|||++++..... ++..+|+|||||||..+|+++++.+++.+.+...+ ..++.++|+++|
T Consensus 20 ~~~~~~~~~s~~G~R-~~nED~~~~~~~~~--~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~l~~a~ 96 (304)
T 2i0o_A 20 NEFLASGSSSMQGWR-ISQEDAHNCILNFD--DQCSFFAVYDGHGGAEVAQYCSLHLPTFLKTVEAYGRKEFEKALKEAF 96 (304)
T ss_dssp CSSEEEEEEEEEESS-SCCCEEEEEEEEEE--TTEEEEEEEECSSCSHHHHHHHHHHHHHHHHSHHHHTTCHHHHHHHHH
T ss_pred CCceEEEEeecCCCC-CCccCEEEEEeccC--CCeEEEEEEcCCCCHHHHHHHHHHHHHHHHhhhhcccccHHHHHHHHH
Confidence 447999999999985 89999987654332 35789999999999999999999999888764322 246789999999
Q ss_pred HHHHHHHHhcC----------------CCCCCCccceEEEEEEeCCEEEEEEcccCcEEEEcCCeeeeCCCCCCC--hhH
Q 028938 108 EKTDQAILSHS----------------SDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTE 169 (201)
Q Consensus 108 ~~~~~~i~~~~----------------~~~~~~ggTtl~~~~i~~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~--~~E 169 (201)
..+|+.|.+.. ......+|||++++++.++++|+||+||||+|++++|++++||+||+| +.|
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~e 176 (304)
T 2i0o_A 97 LGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEMSFDHKPEDTVE 176 (304)
T ss_dssp HHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHH
T ss_pred HHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEcCCCcCCcCHHH
Confidence 99999886531 122456889999989999999999999999999999999999999999 889
Q ss_pred HHHHHhCCCEEE
Q 028938 170 RGSIEDKGGFVS 181 (201)
Q Consensus 170 ~~RI~~~gG~v~ 181 (201)
++||+++||+|.
T Consensus 177 ~~rI~~~gg~v~ 188 (304)
T 2i0o_A 177 YQRIEKAGGRVT 188 (304)
T ss_dssp HHHHHHTTCCBC
T ss_pred HHHHHhCCCEEE
Confidence 999999999987
No 2
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=99.97 E-value=6.9e-31 Score=219.78 Aligned_cols=153 Identities=29% Similarity=0.465 Sum_probs=128.0
Q ss_pred CCceEEEEEeeecCCCCCCCccEEEEEeecC-CCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccCC-----------
Q 028938 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQ-GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFW----------- 96 (201)
Q Consensus 29 ~~~~~~~~~s~~G~rr~~neD~~~~~~~~~~-~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~----------- 96 (201)
...+.+++.+++|.| +.|||++++...... ..+..+|+|||||||..+|++++..+++.+.+...+.
T Consensus 21 ~~~~~~~~~s~~G~R-~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~ 99 (307)
T 2p8e_A 21 GNGLRYGLSSMQGWR-VEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALEL 99 (307)
T ss_dssp ETTEEEEEEEEEETS-SSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------
T ss_pred CCCeeEEEEecCCCC-CcccceEEEEecCCCCCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccc
Confidence 357899999999995 899999977654322 2357899999999999999999999999987643222
Q ss_pred --CCHHHHHHHHHHHHHHHHHhcCC--CCCCCccceEEEEEEeCCEEEEEEcccCcEEEEcCCeeeeCCCCCCC--hhHH
Q 028938 97 --VDPQRSISKAYEKTDQAILSHSS--DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTER 170 (201)
Q Consensus 97 --~~~~~~l~~a~~~~~~~i~~~~~--~~~~~ggTtl~~~~i~~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~--~~E~ 170 (201)
..+.++|+++|.++|+.|.+... .....+|||++++++.++++|+||+||||+|++|+|++.+||+||+| +.|+
T Consensus 100 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~ 179 (307)
T 2p8e_A 100 SVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREK 179 (307)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHH
Confidence 23578899999999999987543 22356888888889999999999999999999999999999999999 8999
Q ss_pred HHHHhCCCEEEc
Q 028938 171 GSIEDKGGFVSN 182 (201)
Q Consensus 171 ~RI~~~gG~v~~ 182 (201)
+||.++||.|..
T Consensus 180 ~rI~~~gg~v~~ 191 (307)
T 2p8e_A 180 ERIQNAGGSVMI 191 (307)
T ss_dssp HHHHHTTCCEET
T ss_pred HHHHHcCCEEEe
Confidence 999999998864
No 3
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=99.97 E-value=5.5e-31 Score=223.10 Aligned_cols=152 Identities=26% Similarity=0.353 Sum_probs=127.7
Q ss_pred eEEEEEeeecCCCCCCCccEEEEEeecC------------------CCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhc
Q 028938 32 VKFGFSLVKGKANHPMEDYHVAKFVQLQ------------------GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEE 93 (201)
Q Consensus 32 ~~~~~~s~~G~rr~~neD~~~~~~~~~~------------------~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~ 93 (201)
-.||..+++|+| ..|||++++...... ..+..||+|||||||.++++++++.++..+.+..
T Consensus 14 ~~~G~~s~~G~R-~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~ 92 (337)
T 3qn1_B 14 PLWGTVSIQGNR-SEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEI 92 (337)
T ss_dssp CCEEEEEECTTS-SSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeeeCC-chhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHH
Confidence 359999999997 899999987644221 1257899999999999999999999988886542
Q ss_pred cC--------------CCCHHHHHHHHHHHHHHHHHhcC-------------CCCCCCccceEEEEEEeCCEEEEEEccc
Q 028938 94 EF--------------WVDPQRSISKAYEKTDQAILSHS-------------SDLGRGGSTAVTAILINGQRLWVANVGD 146 (201)
Q Consensus 94 ~~--------------~~~~~~~l~~a~~~~~~~i~~~~-------------~~~~~~ggTtl~~~~i~~~~l~~anvGD 146 (201)
.. ...+.++|+++|..+|+.+.... ......+|||++++++.++++|+||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGD 172 (337)
T 3qn1_B 93 ERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGD 172 (337)
T ss_dssp HHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESS
T ss_pred HhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccC
Confidence 21 23467899999999999998754 1223568999999999999999999999
Q ss_pred CcEEEEcCCeeeeCCCCCCC--hhHHHHHHhCCCEEEccC
Q 028938 147 SRAVLSTAGVAVQMTTDHEP--NTERGSIEDKGGFVSNMP 184 (201)
Q Consensus 147 SRa~l~~~g~~~~LT~dH~~--~~E~~RI~~~gG~v~~~~ 184 (201)
||+|++|++++.+||+||+| +.|+.||+++||.|..+.
T Consensus 173 SR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~ 212 (337)
T 3qn1_B 173 SRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQ 212 (337)
T ss_dssp CEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESS
T ss_pred cEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecC
Confidence 99999999999999999999 899999999999998654
No 4
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=99.97 E-value=1.4e-30 Score=218.66 Aligned_cols=150 Identities=26% Similarity=0.397 Sum_probs=124.3
Q ss_pred ceEEEEEeeecCCCCCCCccEEEEEeec-------------CCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccC--
Q 028938 31 LVKFGFSLVKGKANHPMEDYHVAKFVQL-------------QGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF-- 95 (201)
Q Consensus 31 ~~~~~~~s~~G~rr~~neD~~~~~~~~~-------------~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~-- 95 (201)
-..||+.+++|+| +.|||++++..... ...+..+|+|||||||..+++++++.+++.+.+....
T Consensus 8 ~~~~g~~s~~G~R-~~nEDa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~DG~GG~~~~~~as~~~~~~l~~~~~~~~ 86 (316)
T 3kdj_B 8 VPLYGFTSICGRR-PEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEK 86 (316)
T ss_dssp --CEEEEEECTTS-SSCCEEEEEETTCC-----------CCGGGGCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEeEeCC-CCCccceeeecccccccccccccccccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHHHHhhh
Confidence 4679999999996 89999997743211 1236789999999999999999999998888654211
Q ss_pred ---------CCCHHHHHHHHHHHHHHHHHhcCCCCCCCccceEEEEEEeCCEEEEEEcccCcEEEEcCCeeeeCCCCCCC
Q 028938 96 ---------WVDPQRSISKAYEKTDQAILSHSSDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 96 ---------~~~~~~~l~~a~~~~~~~i~~~~~~~~~~ggTtl~~~~i~~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~ 166 (201)
...+.++|+++|..+|+.+..... ..+|||++++++.++++|+||+||||+|++|++++.+||+||+|
T Consensus 87 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~---~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~ 163 (316)
T 3kdj_B 87 PMLSDGDTWLEKWKKALFNSFLRVDSEIESVAP---ETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKP 163 (316)
T ss_dssp CCGGGTHHHHHHHHHHHHHHHHHHHHHGGGTSC---TTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCT
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHHhcccC---CCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCCC
Confidence 123678999999999999866432 45888888889999999999999999999999999999999999
Q ss_pred --hhHHHHHHhCCCEEEccC
Q 028938 167 --NTERGSIEDKGGFVSNMP 184 (201)
Q Consensus 167 --~~E~~RI~~~gG~v~~~~ 184 (201)
+.|+.||.++||.+..+.
T Consensus 164 ~~~~e~~ri~~~~g~v~~~~ 183 (316)
T 3kdj_B 164 DREDEAARIEAAGGKVIQWN 183 (316)
T ss_dssp TSHHHHHHHHHTTCCEEESS
T ss_pred CCHHHHHHHHHcCCeEEecC
Confidence 899999999999998654
No 5
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=99.97 E-value=4.6e-30 Score=211.43 Aligned_cols=149 Identities=31% Similarity=0.413 Sum_probs=124.5
Q ss_pred CceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Q 028938 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEK 109 (201)
Q Consensus 30 ~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~l~~a~~~ 109 (201)
....+++.|++|.| +.|||++++... .++..+|+|||||||..+|+++++.+.+.+.+......++.+.|+++|.+
T Consensus 6 ~~~~~g~~s~~G~R-~~nED~~~~~~~---~~~~~l~~V~DG~GG~~~a~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~ 81 (274)
T 2iq1_A 6 SLENVGCASQIGKR-KENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLE 81 (274)
T ss_dssp CGGGCEEEEECCSS-SSCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred cCCeEEEEecccCC-CCccceEEEeeC---CCCeEEEEEECCCCCHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHH
Confidence 34568999999995 899999876431 24578999999999999999999988887766544445788999999999
Q ss_pred HHHHHHhcCC----CCCCCccceEEEEEEe-CCEEEEEEcccCcEEEEcCCeeeeCCCCCCC--hhHHHHHHhCCCEEEc
Q 028938 110 TDQAILSHSS----DLGRGGSTAVTAILIN-GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTERGSIEDKGGFVSN 182 (201)
Q Consensus 110 ~~~~i~~~~~----~~~~~ggTtl~~~~i~-~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~--~~E~~RI~~~gG~v~~ 182 (201)
+|+.+.+... .....+|||++++++. ++++|+||+||||+|+++++++.+||.||+| +.|+.||+++||.|..
T Consensus 82 ~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~~Ri~~~gG~v~~ 161 (274)
T 2iq1_A 82 IDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAW 161 (274)
T ss_dssp HHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHHHHHHHcCCEEEc
Confidence 9999987431 1234577787777776 4699999999999999999999999999999 8999999999999885
No 6
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=99.97 E-value=2.7e-30 Score=220.98 Aligned_cols=149 Identities=25% Similarity=0.286 Sum_probs=121.4
Q ss_pred CCceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHH
Q 028938 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYE 108 (201)
Q Consensus 29 ~~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~l~~a~~ 108 (201)
+..+.++..+++|+| +.|||++++.......++..||+|||||||..+|++++++|+..+.+... ...+.|+++|.
T Consensus 10 ~~~~~~~~~s~~G~R-~~nED~~~v~~~~~~~~~~~lf~VfDGHGG~~as~~a~~~l~~~l~~~~~---~~~~~l~~a~~ 85 (364)
T 2isn_A 10 EWYTTTVAATMLGRR-PTDEDAILVSAPATSRPNVRIKAVFDGHAGEATSQYCAKHAAKHLGKLSE---FTFAEVKKACL 85 (364)
T ss_dssp ETTEEEEEEEECTTS-SSCCEEEEEECC----CCEEEEEEEEEESCSHHHHHHHHHHHHHHTTCSS---CCHHHHHHHHH
T ss_pred CCceEEEEEEcCCCC-CcCCCeeEEeccCCCCCCeEEEEEEECCCCHHHHHHHHHHHHHHHHHhhc---ccHHHHHHHHH
Confidence 344789999999985 89999998764443346789999999999999999999999998865332 23678999999
Q ss_pred HHHHHHHhcCCCCCCCccceEEEEEEeC----------------------------------------------------
Q 028938 109 KTDQAILSHSSDLGRGGSTAVTAILING---------------------------------------------------- 136 (201)
Q Consensus 109 ~~~~~i~~~~~~~~~~ggTtl~~~~i~~---------------------------------------------------- 136 (201)
.+|+.|.+..... ..+|||++++++.+
T Consensus 86 ~~d~~i~~~~~~~-~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (364)
T 2isn_A 86 SLDAEIIRKLGPK-HVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPLEKLIQEEEEAEHPELVGRYPRVPDVQ 164 (364)
T ss_dssp HHHHHHHHHHCSS-SCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCHHHHHHHHHHC-----CCSSCCCCCCE
T ss_pred HHHHHHHHhcccC-CCCCcceehhhhhccccccccccccccccccccccchhhhhhhhhhhhhccccccccccccccccc
Confidence 9999997754433 45677776666642
Q ss_pred --------CEEEEEEcccCcEEEE-cCCeeeeCCCCCCC--hhHHHHHHhCCCEEEc
Q 028938 137 --------QRLWVANVGDSRAVLS-TAGVAVQMTTDHEP--NTERGSIEDKGGFVSN 182 (201)
Q Consensus 137 --------~~l~~anvGDSRa~l~-~~g~~~~LT~dH~~--~~E~~RI~~~gG~v~~ 182 (201)
.++|+||+||||+|++ ++|++.+||+||+| +.|++||+++||+|..
T Consensus 165 ~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~v~~ 221 (364)
T 2isn_A 165 QKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGSVET 221 (364)
T ss_dssp EEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCCEEE
T ss_pred ccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCeEec
Confidence 3899999999999999 78999999999999 8899999999999875
No 7
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=99.97 E-value=2.6e-30 Score=222.40 Aligned_cols=152 Identities=28% Similarity=0.435 Sum_probs=127.7
Q ss_pred CceEEEEEeeecCCCCCCCccEEEEEeecC-CCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccC--------CCCHH
Q 028938 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQ-GHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF--------WVDPQ 100 (201)
Q Consensus 30 ~~~~~~~~s~~G~rr~~neD~~~~~~~~~~-~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~--------~~~~~ 100 (201)
..+.|++.+++|.| +.|||++++...... ..+..+|+|||||||..+|++++..+++.+.+...+ ...+.
T Consensus 20 ~~l~~g~~s~~G~R-~~nEDa~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~~~~~~~~~~~~~~~~ 98 (382)
T 1a6q_A 20 NGLRYGLSSMQGWR-VEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVK 98 (382)
T ss_dssp TTEEEEEEEEEETS-SSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHH
T ss_pred CceEEEEEecCCCC-CCCCceeEEecCCCCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHhhhhhhccCCCCCHHHHH
Confidence 47899999999995 899999987654322 135789999999999999999999999888753211 12457
Q ss_pred HHHHHHHHHHHHHHHhcC--CCCCCCccceEEEEEEeCCEEEEEEcccCcEEEEcCCeeeeCCCCCCC--hhHHHHHHhC
Q 028938 101 RSISKAYEKTDQAILSHS--SDLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTERGSIEDK 176 (201)
Q Consensus 101 ~~l~~a~~~~~~~i~~~~--~~~~~~ggTtl~~~~i~~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~--~~E~~RI~~~ 176 (201)
++|+++|..+|+.|.+.. ......+|||++++++.++++|+||+||||+|++|+|++.+||+||+| +.|++||..+
T Consensus 99 ~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~RI~~~ 178 (382)
T 1a6q_A 99 NGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNA 178 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHHHHHhc
Confidence 899999999999998743 223356888888889999999999999999999999999999999999 8899999999
Q ss_pred CCEEEc
Q 028938 177 GGFVSN 182 (201)
Q Consensus 177 gG~v~~ 182 (201)
||.|..
T Consensus 179 gg~v~~ 184 (382)
T 1a6q_A 179 GGSVMI 184 (382)
T ss_dssp TCCEET
T ss_pred CcEEec
Confidence 999874
No 8
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=99.97 E-value=4.2e-30 Score=216.19 Aligned_cols=151 Identities=19% Similarity=0.295 Sum_probs=119.9
Q ss_pred CceEEEEEeeecCCCCCCCccEEEEEeec-CCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccC-------------
Q 028938 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQL-QGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEF------------- 95 (201)
Q Consensus 30 ~~~~~~~~s~~G~rr~~neD~~~~~~~~~-~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~------------- 95 (201)
..+.+++.|++|. |+.|||++++..... ...+..+|+|||||||..+++++++.+++.+.+...+
T Consensus 20 ~~~~~~~~s~~G~-R~~nED~~~~~~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~~~~~~~l~~~~~~ 98 (324)
T 2i44_A 20 PAFDAAIFTDIGG-RKHQEDRFTLCPQLVPGRDDCAFFGVFDGTVGDFASENVKDLVVPQLISSPAWQEVTEMLRSDVPA 98 (324)
T ss_dssp TTEEEEEEEECTT-SSSCCEEEEEESCCSTTCSSEEEEEEEEEESSSHHHHHHHHHHHHHHHTCHHHHHHHHHHTSCCCH
T ss_pred cceEEEEEECCCC-CCccCCeEEEEecCCCCCCCeEEEEEeCCCCchHHHHHHHHHHHHHHHhhhHHHHHHHHhhccCCc
Confidence 4788999999999 489999987763321 2356789999999999999999999999888653111
Q ss_pred -------CCCHHHHHHHHHHHHHHHHHhcCC--CCCCCccceEEEEEEeCCEEEEEEcccCcEEEEcC---C-eeeeCCC
Q 028938 96 -------WVDPQRSISKAYEKTDQAILSHSS--DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTA---G-VAVQMTT 162 (201)
Q Consensus 96 -------~~~~~~~l~~a~~~~~~~i~~~~~--~~~~~ggTtl~~~~i~~~~l~~anvGDSRa~l~~~---g-~~~~LT~ 162 (201)
...+.++|+++|..+|+.|.+... .....|+||+++ ++.++++|+||+||||+|++++ | ++.+||+
T Consensus 99 ~~~~~~~~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~-~i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~ 177 (324)
T 2i44_A 99 TEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTA-VLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTV 177 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEE-EEETTEEEEEEESSCEEEEEEEETTEEEEEESCC
T ss_pred cccccccchhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEE-EEECCeEEEEEccCceEEEEeccCCCceEEECCC
Confidence 124578899999999999987532 122233333333 3788999999999999999996 7 8999999
Q ss_pred CCCC--hhHHHHHHhCCCEEEc
Q 028938 163 DHEP--NTERGSIEDKGGFVSN 182 (201)
Q Consensus 163 dH~~--~~E~~RI~~~gG~v~~ 182 (201)
||+| +.|++||.++||+|..
T Consensus 178 DH~~~~~~E~~Ri~~~Gg~v~~ 199 (324)
T 2i44_A 178 DHKPDMPHEKLRIMRNGGSVEY 199 (324)
T ss_dssp CCCTTSHHHHHHHHHTTCEEEC
T ss_pred CCCCcCHHHHHHHHHcCCEEEe
Confidence 9999 8999999999999953
No 9
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=99.97 E-value=3.9e-30 Score=219.55 Aligned_cols=143 Identities=18% Similarity=0.262 Sum_probs=119.1
Q ss_pred EeeecCCCC--CCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhh-c---cCCCCHHHHHHHHHHHH
Q 028938 37 SLVKGKANH--PMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKE-E---EFWVDPQRSISKAYEKT 110 (201)
Q Consensus 37 ~s~~G~rr~--~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~-~---~~~~~~~~~l~~a~~~~ 110 (201)
++.+|.|+. +|||++++.. ...+..||+|||||||..+|++++++++..+.+. . .....+.++|+++|..+
T Consensus 25 ~~~~G~r~~~~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~l~~~~~~~~~~~~l~~a~~~~ 101 (358)
T 2irm_A 25 YKDDGRRCEGYESRDKKCLCI---SDNNTSLYAILSGHNGVTVAENALQEMAAELLLGQLNVCNTDEAVKELIRQSFMSV 101 (358)
T ss_dssp ECSSSCEEECSSCCEEEEEEE---CSSSEEEEEEEEEESCSHHHHHHHHHHHHHSSSSTTTTCCSHHHHHHHHHHHHHHH
T ss_pred eecCCCCCCCCCCCceEEEEE---CCCCEEEEEEEcCCCCHHHHHHHHHHHHHHHHHhhhccccchhhHHHHHHHHHHHH
Confidence 677999853 6999987643 2356899999999999999999999999988752 1 12235688999999999
Q ss_pred HHHHHhcCC-------------------------------------CCCCCccceEEEEEEeCCEEEEEEcccCcEEEEc
Q 028938 111 DQAILSHSS-------------------------------------DLGRGGSTAVTAILINGQRLWVANVGDSRAVLST 153 (201)
Q Consensus 111 ~~~i~~~~~-------------------------------------~~~~~ggTtl~~~~i~~~~l~~anvGDSRa~l~~ 153 (201)
|+.|.+... .....+|||++++++.++++|+|||||||+|++|
T Consensus 102 d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~~~l~vAnvGDSRa~l~r 181 (358)
T 2irm_A 102 EKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHRSHLYLGNIGNCRALLCK 181 (358)
T ss_dssp HHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEESSEEEEEEESSCEEEEEE
T ss_pred HHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEECCEEEEEEcccCeEEEEE
Confidence 999875320 1224688999999999999999999999999999
Q ss_pred C---C--eeeeCCCCCCC--hhHHHHHHhCCCEEEc
Q 028938 154 A---G--VAVQMTTDHEP--NTERGSIEDKGGFVSN 182 (201)
Q Consensus 154 ~---g--~~~~LT~dH~~--~~E~~RI~~~gG~v~~ 182 (201)
+ | ++.+||+||+| +.|++||.++||.|..
T Consensus 182 ~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~ 217 (358)
T 2irm_A 182 TDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQN 217 (358)
T ss_dssp CCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGG
T ss_pred ecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEec
Confidence 8 8 99999999999 8899999999999875
No 10
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=99.96 E-value=4e-30 Score=222.49 Aligned_cols=158 Identities=20% Similarity=0.271 Sum_probs=126.2
Q ss_pred CCCCCCCCCCCceEEEEEeeecCCCC-------CCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhh
Q 028938 20 SSTGKGRSNVGLVKFGFSLVKGKANH-------PMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKE 92 (201)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~s~~G~rr~-------~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~ 92 (201)
+.-.........+.+|+.+++|.|.. .|||++++.. ...+..||+|||||||..+|++++++++..+.+.
T Consensus 15 ~~~~~~~~~~~~~~~G~~~~~G~r~~g~~~~r~~nED~~~~~~---~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~ 91 (401)
T 2j4o_A 15 PSWTDDLPLCHLSGVGSASNRSYSADGKGTESHPPEDSWLKFR---SENNCFLYGVFNGYDGNRVTNFVAQRLSAELLLG 91 (401)
T ss_dssp -CCTTTSCBCTTEEEEEECCEEECSSSSCEECCCCCEEEEEEE---ETTTEEEEEEEEEESSSHHHHHHHHHHHHTTSSS
T ss_pred CCccccccccccCceeEEecccccccccccCCCCCCceEEEec---CCCCeEEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 33333344455789999999999842 6999987643 2356799999999999999999999999888643
Q ss_pred cc----CCCCHHHHHHHHHHHHHHHHHhcCC------------------------------------CCCCCccceEEEE
Q 028938 93 EE----FWVDPQRSISKAYEKTDQAILSHSS------------------------------------DLGRGGSTAVTAI 132 (201)
Q Consensus 93 ~~----~~~~~~~~l~~a~~~~~~~i~~~~~------------------------------------~~~~~ggTtl~~~ 132 (201)
.. ....+.++|+++|..+|+.|.+... .....+|||++++
T Consensus 92 ~~~~~~~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~ 171 (401)
T 2j4o_A 92 QLNAEHAEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVA 171 (401)
T ss_dssp SCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred hhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEE
Confidence 11 1235788999999999988765210 0123578888888
Q ss_pred EEeCCEEEEEEcccCcEEEEcCC----eeeeCCCCCCC--hhHHHHHHhCCCEE
Q 028938 133 LINGQRLWVANVGDSRAVLSTAG----VAVQMTTDHEP--NTERGSIEDKGGFV 180 (201)
Q Consensus 133 ~i~~~~l~~anvGDSRa~l~~~g----~~~~LT~dH~~--~~E~~RI~~~gG~v 180 (201)
++.++++|+|||||||+|+++++ ++.+||+||+| +.|++||.++||.+
T Consensus 172 li~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v 225 (401)
T 2j4o_A 172 VLLNNKLYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDA 225 (401)
T ss_dssp EEETTEEEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCH
T ss_pred EEECCEEEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCe
Confidence 99999999999999999999988 99999999999 88999999999986
No 11
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=99.96 E-value=8.1e-29 Score=213.54 Aligned_cols=149 Identities=30% Similarity=0.401 Sum_probs=125.4
Q ss_pred CceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Q 028938 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEK 109 (201)
Q Consensus 30 ~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~l~~a~~~ 109 (201)
..+.+++.|++|.| +.|||++++... .++..+|+|||||||..++++++..+.+.+.+.......+.++|+++|..
T Consensus 120 ~~~~~g~~s~~G~R-~~NED~~~~~~~---~~~~~l~~VaDG~GG~~~g~~as~~~~~~l~~~~~~~~~~~~~l~~a~~~ 195 (389)
T 4da1_A 120 SLENVGCASQIGKR-KENEDRFDFAQL---TDEVLYFAVYDGHGGPAAADFCHTHMEKCIMDLLPKEKNLETLLTLAFLE 195 (389)
T ss_dssp CGGGCEEEEECTTS-SSCCEEEEEEEC---SSSEEEEEEEEEESSTHHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred cceeEEEecCCCCC-CCCcceeeeeec---CCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHHH
Confidence 35678999999995 899999876432 24578999999999999999999999888877655566789999999999
Q ss_pred HHHHHHhcCC----CCCCCccceEEEEEEeCC-EEEEEEcccCcEEEEcCCeeeeCCCCCCC--hhHHHHHHhCCCEEEc
Q 028938 110 TDQAILSHSS----DLGRGGSTAVTAILINGQ-RLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTERGSIEDKGGFVSN 182 (201)
Q Consensus 110 ~~~~i~~~~~----~~~~~ggTtl~~~~i~~~-~l~~anvGDSRa~l~~~g~~~~LT~dH~~--~~E~~RI~~~gG~v~~ 182 (201)
+|+.+.+... .....+|||++++++.++ ++|+||+||||+|++|++++.+||+||++ +.|++||.++||.|..
T Consensus 196 ~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~Ri~~~gG~v~~ 275 (389)
T 4da1_A 196 IDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVAW 275 (389)
T ss_dssp HHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHHHHHHHHTCCEEC
T ss_pred HHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHHHHHHHHcCCeEec
Confidence 9999986432 223456777777677655 99999999999999999999999999999 8899999999999874
No 12
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=99.96 E-value=1.4e-29 Score=217.39 Aligned_cols=149 Identities=19% Similarity=0.343 Sum_probs=120.4
Q ss_pred CCceEEEEEeeecCCCCCC-----CccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccCCCCHHHHH
Q 028938 29 VGLVKFGFSLVKGKANHPM-----EDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSI 103 (201)
Q Consensus 29 ~~~~~~~~~s~~G~rr~~n-----eD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~l 103 (201)
...+.++..|++|+| +.| ||++++.......++..||+|||||||.++|++++++++..+.+.. ..+.++|
T Consensus 10 ~~~~~~~~~s~~G~R-~~~ED~~neD~~~~~~~~~~~~~~~lf~V~DGhGG~~aa~~as~~l~~~l~~~~---~~~~~al 85 (377)
T 3d8k_A 10 EGRTVCASATSRNRR-PTSESPHSDDVVVVEGMLRGRPETRVHAMFDGFQGRHSAMWLAQNVMNYLNDLR---DVNEEEI 85 (377)
T ss_dssp HHHHHHHHTTTCEEE-EEECC---CEEEEEEEECSSCTTEEEEEEEEBSSSSHHHHHHHHHHHHHHTTCS---SSSHHHH
T ss_pred CCcEEEEEEEccCCC-CccccchhcceEEEecccCCCCCeEEEEEEcCCCcHHHHHHHHHHHHHHHHHhc---ccHHHHH
Confidence 445678888999996 666 5555554333345678999999999999999999999999886532 3457999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCccceEEEEEEe------------------------------------------------
Q 028938 104 SKAYEKTDQAILSHSSDLGRGGSTAVTAILIN------------------------------------------------ 135 (201)
Q Consensus 104 ~~a~~~~~~~i~~~~~~~~~~ggTtl~~~~i~------------------------------------------------ 135 (201)
+++|.++|+.|.+... .+|||++++++.
T Consensus 86 ~~af~~~d~~l~~~~~----~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~~p~~ 161 (377)
T 3d8k_A 86 TRQFERMDGDLRAANL----PGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRRDPRA 161 (377)
T ss_dssp HHHHHHHHHHHHHHTC----CCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGGCGGG
T ss_pred HHHHHHHHHHHHhccc----CCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999999988653 356666655553
Q ss_pred ---CCEEEEEEcccCcEEEEcCCeeeeCCCCCCC--hhHHHHHHhCCCEEEccCC
Q 028938 136 ---GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP--NTERGSIEDKGGFVSNMPG 185 (201)
Q Consensus 136 ---~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~--~~E~~RI~~~gG~v~~~~g 185 (201)
++++|+||+||||+|++++|++.+||+||+| +.|+.||+++||+|....|
T Consensus 162 ~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g 216 (377)
T 3d8k_A 162 AKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNG 216 (377)
T ss_dssp TTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSS
T ss_pred ccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCC
Confidence 1489999999999999999999999999999 8899999999999985455
No 13
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=99.95 E-value=9.2e-28 Score=211.13 Aligned_cols=147 Identities=25% Similarity=0.316 Sum_probs=118.6
Q ss_pred CceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhh---------c-------
Q 028938 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKE---------E------- 93 (201)
Q Consensus 30 ~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~---------~------- 93 (201)
.....++.|++|..|+.|||++.+..... .+..||||||||||..+|++++.+++..+... .
T Consensus 35 ~~~v~~~~s~~g~~R~~nED~~~v~~~~~--~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~ 112 (467)
T 2pnq_A 35 VSSILGFDSNRLPANAPIEDRRSATTCLQ--TRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESG 112 (467)
T ss_dssp CCSEEEEEEEEECCSSSCCEEEEEEEESS--SSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC--
T ss_pred ccceEEEEeeccCCCCCCCCceeeeeccC--CCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcc
Confidence 34566677889988899999987654322 34689999999999999999999998877532 0
Q ss_pred --------------c-----------------------------CCCCHHHHHHHHHHHHHHHHHhcCCC----------
Q 028938 94 --------------E-----------------------------FWVDPQRSISKAYEKTDQAILSHSSD---------- 120 (201)
Q Consensus 94 --------------~-----------------------------~~~~~~~~l~~a~~~~~~~i~~~~~~---------- 120 (201)
+ ....+.++|+++|..+|+.|.+....
T Consensus 113 ~~~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~ 192 (467)
T 2pnq_A 113 RALLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYL 192 (467)
T ss_dssp --CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHH
T ss_pred ccccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccc
Confidence 0 01157899999999999999864321
Q ss_pred --CCCCccceEEEEEEeCCEEEEEEcccCcEEEEc---CC--eeeeCCCCCCC--hhHHHHHHhCCC
Q 028938 121 --LGRGGSTAVTAILINGQRLWVANVGDSRAVLST---AG--VAVQMTTDHEP--NTERGSIEDKGG 178 (201)
Q Consensus 121 --~~~~ggTtl~~~~i~~~~l~~anvGDSRa~l~~---~g--~~~~LT~dH~~--~~E~~RI~~~gG 178 (201)
....+|||++++++.++++|+||+||||+|+++ +| .+.+||.||+| +.|++||.++|+
T Consensus 193 ~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~ 259 (467)
T 2pnq_A 193 VLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNERELQRLKLEHP 259 (467)
T ss_dssp HHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEECCCCCSTTCHHHHHHHHHTSC
T ss_pred cccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEECCCCCCCCCHHHHHHHHHcCC
Confidence 124578888888999999999999999999998 47 89999999999 899999999985
No 14
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.93 E-value=1.9e-25 Score=179.56 Aligned_cols=130 Identities=24% Similarity=0.246 Sum_probs=109.3
Q ss_pred CceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhcc--CCCCHHHHHHHHH
Q 028938 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEE--FWVDPQRSISKAY 107 (201)
Q Consensus 30 ~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~--~~~~~~~~l~~a~ 107 (201)
.++.++..|++|..|+.|||++++ +..+|+|||||||..++++++..+.+.+.+... ...++.+.|+++|
T Consensus 3 ~~~~~~~~s~~G~~r~~nED~~~~--------~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~l~~a~ 74 (237)
T 1txo_A 3 LVLRYAARSDRGLVRANNEDSVYA--------GARLLALADGMGGHAAGEVASQLVIAALAHLDDDEPGGDLLAKLDAAV 74 (237)
T ss_dssp CEEEEEEEEECCSSCSSCCEEEEE--------CSSEEEEEEEECTTTHHHHHHHHHHHHHGGGGSSCCCSCHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCcCCCcccc--------CCCEEEEEeCCCCcHHHHHHHHHHHHHHHHHhhhCCchhHHHHHHHHH
Confidence 468899999999866899999853 236999999999999999999999888865432 2246889999999
Q ss_pred HHHHHHHHhcCC--CCCCCccceEEEEEEeCCEEEEEEcccCcEEEEcCCeeeeCCCCCCCh
Q 028938 108 EKTDQAILSHSS--DLGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEPN 167 (201)
Q Consensus 108 ~~~~~~i~~~~~--~~~~~ggTtl~~~~i~~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~~ 167 (201)
..+|+.+.+... .....+|||++++++.+++++++|+||||+|+++++++.+||.||+|.
T Consensus 75 ~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~ 136 (237)
T 1txo_A 75 RAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFV 136 (237)
T ss_dssp HHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHH
T ss_pred HHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHH
Confidence 999999987432 223457888888899999999999999999999999999999999983
No 15
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.93 E-value=2.5e-26 Score=186.05 Aligned_cols=133 Identities=19% Similarity=0.216 Sum_probs=109.1
Q ss_pred ceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhc-c--C--CCCHHHHHHH
Q 028938 31 LVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEE-E--F--WVDPQRSISK 105 (201)
Q Consensus 31 ~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~-~--~--~~~~~~~l~~ 105 (201)
.+.++..|++|.+|+.|||++.+.... ++..+|+|||||||+..+++++..+.+.+.++. . . ...+.+.|++
T Consensus 5 ~~~~~~~s~~G~~r~~neD~~~~~~~~---~~~~~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~ 81 (250)
T 2pk0_A 5 YMEISLLTDIGQRRSNNQDFINQFENK---AGVPLIILADGMGGHRAGNIASEMTVTDLGSDWAETDFSELSEIRDWMLV 81 (250)
T ss_dssp CEEEEEEEECCTTCSCCCEEEEEEECT---TCCEEEEEEEEECTTTHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHH
T ss_pred eEEEEEecCCCCCCCcCCCceEeccCC---CCcEEEEEEeCCCCcHHHHHHHHHHHHHHHHHHhhcccCChhhHHHHHHH
Confidence 589999999999669999998765432 356899999999999999888888777766221 1 1 2346788999
Q ss_pred HHHHHHHHHHhcCCC-CCCCccceEEEEEEeCCEEEEEEcccCcEEEEcCCeeeeCCCCCCC
Q 028938 106 AYEKTDQAILSHSSD-LGRGGSTAVTAILINGQRLWVANVGDSRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 106 a~~~~~~~i~~~~~~-~~~~ggTtl~~~~i~~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~ 166 (201)
+|..+|+.+.+.... ....+|||++++++.+++++++|+||||+|+++++++.+||.||+|
T Consensus 82 ~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~ 143 (250)
T 2pk0_A 82 SIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSL 143 (250)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBH
T ss_pred HHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCH
Confidence 999999999875421 1456788888889999999999999999999999999999999999
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.93 E-value=2e-25 Score=179.60 Aligned_cols=130 Identities=23% Similarity=0.233 Sum_probs=101.0
Q ss_pred eEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhcc----C-CCCHHHHHHHH
Q 028938 32 VKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEE----F-WVDPQRSISKA 106 (201)
Q Consensus 32 ~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~----~-~~~~~~~l~~a 106 (201)
++++..|++|.+|+.|||++ +... . ... +|+|||||||+..+++++..+.+.+.+... . ...+.+.|.++
T Consensus 1 ~~~~~~s~~G~~r~~neD~~-~~~~-~--~~~-~~~V~DG~Gg~~~~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 75 (240)
T 2j82_A 1 MDVAGLTDCGLIRKSNQDAF-YIDE-K--HQR-FFIVADGMGGHAGGEEASRLAVDHIRQYLETHLEDLQHDPVTLLRQA 75 (240)
T ss_dssp CEEEEEEECCSSCSSCCEEE-EECT-T--TCC-EEEEEEBC---CHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHH
T ss_pred CeEEEeCCCCCCCCcCCCcc-EecC-C--CCe-EEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcccccchhHHHHHHHH
Confidence 57899999999669999998 5322 1 234 999999999998777777666555543211 1 34678999999
Q ss_pred HHHHHHHHHhcCCC--CCCCccceEEEEEEe--CCEEEEEEcccCcEEEEcCCeeeeCCCCCCC
Q 028938 107 YEKTDQAILSHSSD--LGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 107 ~~~~~~~i~~~~~~--~~~~ggTtl~~~~i~--~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~ 166 (201)
|..+|+.+.+.... ....+|||++++++. +++++++|+||||+|+++++++.+||.||+|
T Consensus 76 ~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~ 139 (240)
T 2j82_A 76 FLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTW 139 (240)
T ss_dssp HHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBH
T ss_pred HHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcH
Confidence 99999999876432 234568888888898 8999999999999999999999999999999
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.92 E-value=1.4e-24 Score=174.17 Aligned_cols=125 Identities=21% Similarity=0.211 Sum_probs=101.9
Q ss_pred CceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCC--hHHHHHHHHHHHHHHhhccCCCCHHHHHHHHH
Q 028938 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGE--TVPAYLQKHLFSNILKEEEFWVDPQRSISKAY 107 (201)
Q Consensus 30 ~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~--~~a~~~~~~l~~~l~~~~~~~~~~~~~l~~a~ 107 (201)
..+.++..|++|..|+.|||++++ +..+|+|||||||+ .+|.++...+.+.+... .+ .+.|+++|
T Consensus 4 ~~~~~~~~s~~G~~r~~neD~~~~--------~~~~~~V~DG~Gg~G~~as~~~~~~l~~~~~~~----~~-~~~l~~~~ 70 (234)
T 2jfr_A 4 SVLSAATATDQGPVRENNQDACLA--------DGILYAVADGFGARGHHASATALKTLSAGFAAA----PD-RDGLLEAV 70 (234)
T ss_dssp SEEEEEEEEECCSSCSSCCEEEEE--------ETTEEEEEEEESTTHHHHHHHHHHHHHHHHHHS----CS-HHHHHHHH
T ss_pred eeEEEEEecCCCCCCCcCCCccee--------CCcEEEEEeCCCccHHHHHHHHHHHHHHHHhcC----Cc-HHHHHHHH
Confidence 468999999999966999999854 34699999999976 77777777666654432 12 78899999
Q ss_pred HHHHHHHHhcCCCCCCCccceEEEEEEeCCE---EEEEEcccCcEEEEcCCeeeeCCCCCCCh
Q 028938 108 EKTDQAILSHSSDLGRGGSTAVTAILINGQR---LWVANVGDSRAVLSTAGVAVQMTTDHEPN 167 (201)
Q Consensus 108 ~~~~~~i~~~~~~~~~~ggTtl~~~~i~~~~---l~~anvGDSRa~l~~~g~~~~LT~dH~~~ 167 (201)
..+|+.+.+........+|||++++++.+++ ++++|+||||+|+++++++.+||.||++.
T Consensus 71 ~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~ 133 (234)
T 2jfr_A 71 QQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVA 133 (234)
T ss_dssp HHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHH
T ss_pred HHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHH
Confidence 9999999875443222278888888888888 99999999999999999999999999993
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.85 E-value=9.6e-21 Score=150.11 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=81.2
Q ss_pred CceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHhcC--CCCCCCccceEEEEEEe--C
Q 028938 61 HELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEKTDQAILSHS--SDLGRGGSTAVTAILIN--G 136 (201)
Q Consensus 61 ~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~l~~a~~~~~~~i~~~~--~~~~~~ggTtl~~~~i~--~ 136 (201)
++..+|+|||||||+..++.++..+.+.+.+.......+ .+++..+|+.+.+.. ......+|||++++++. +
T Consensus 8 ~~~~l~~VaDG~GG~~~g~~AS~~~~~~l~~~~~~~~~~----~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~ 83 (211)
T 3rnr_A 8 GDKAYCVVVDGMGGMIRGDEAAQRALSASVGVLDAGGSP----LDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRD 83 (211)
T ss_dssp TTEEEEEEEEECTTSTTHHHHHHHHHHHHHHHHHTTCCH----HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTT
T ss_pred CCccEEEEEeCCcCcHHHHHHHHHHHHHHHHHHhccCCH----HHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCC
Confidence 557899999999998888888777777665533222233 567777777776542 23345688999999999 8
Q ss_pred CEEEEEEcccCcEEEEcCCeeeeCCCCCCCh
Q 028938 137 QRLWVANVGDSRAVLSTAGVAVQMTTDHEPN 167 (201)
Q Consensus 137 ~~l~~anvGDSRa~l~~~g~~~~LT~dH~~~ 167 (201)
+++|++|+||||+|++|++++.+||.||++.
T Consensus 84 ~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~ 114 (211)
T 3rnr_A 84 GTLEWASVGDCRVYLFKGGRLSRLSLDHNVS 114 (211)
T ss_dssp TEEEEEEESSCEEEEEETTEEEECCCCCBHH
T ss_pred CEEEEEEEccCeEEEEeCCEEEEECCCcHHH
Confidence 9999999999999999999999999999983
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.23 E-value=7e-11 Score=94.64 Aligned_cols=125 Identities=14% Similarity=0.105 Sum_probs=79.4
Q ss_pred CCceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHH---HHHHHHHHHhhccCCCCHHHHHHH
Q 028938 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYL---QKHLFSNILKEEEFWVDPQRSISK 105 (201)
Q Consensus 29 ~~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~---~~~l~~~l~~~~~~~~~~~~~l~~ 105 (201)
...+.+++++..-..+..+.|.+.+... .++..+++|+||+|++..|..+ +...+..+.... .. +.+
T Consensus 5 ~~~i~~~~~~~~~p~~~v~GD~y~~~~~---~~~~~~~~vaDg~G~G~~aa~~s~~~~~~l~~~~~~~---~~----~~~ 74 (242)
T 3t91_A 5 SYRVSTGAAHAAKGGGLVSGDSYSMMEL---GARKYAAAISDGMGNGARAHFESNETIKLLEKILESG---ID----EKI 74 (242)
T ss_dssp CCEEEEEEEEECTTSCSCCSCEEEEEEE---TTTEEEEEEECC-----CCSEEECHHHHHHHHHHHHT---CC----HHH
T ss_pred eEEEEEEeehhcCCccccCCcEEEEEEe---CCCeEEEEEEeeCCCCHHHHHHHHHHHHHHHHHHHhC---CC----HHH
Confidence 3467888888877666799999865332 2345789999997754444333 233333443322 12 455
Q ss_pred HHHHHHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEcccCcEEEEcCCeeeeCCCCCCC
Q 028938 106 AYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 106 a~~~~~~~i~~~~~~~~~~ggTtl~~~~i~--~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~ 166 (201)
++..+|+.+..... ..+.+|++++++. +++++++|+||+|+|+++++++.+|+.++.|
T Consensus 75 ~l~~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~ 134 (242)
T 3t91_A 75 AIKTINSILSLRTT---DEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNLP 134 (242)
T ss_dssp HHHHHHHHHTTC-------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC---
T ss_pred HHHHHHHHHHhcCC---CCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCce
Confidence 66777777765432 2456777766775 7899999999999999999999999988776
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.15 E-value=2.2e-09 Score=86.26 Aligned_cols=128 Identities=9% Similarity=-0.031 Sum_probs=88.5
Q ss_pred CCceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHH
Q 028938 29 VGLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYE 108 (201)
Q Consensus 29 ~~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~l~~a~~ 108 (201)
...+.+++.+.....+..+.|.+.+... .+...+++|+||.|++..|..++..+...+.+....... +.+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~vgGD~y~~~~~---~~~~~~~~vaD~~G~G~~aa~~s~~~~~~l~~~~~~~~~----~~~~l~ 80 (242)
T 3pu9_A 8 PVTIELAVAKTHKFGTRESGDTVELVER---PGGGFSAVLVDGQGSGAGAKRLSLLVAGAAVRLLNEGVR----DGAAAR 80 (242)
T ss_dssp CEEEEEEEEEECCTTCSSCSEEEEEEEC---TTSEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCC----HHHHHH
T ss_pred CcEEEEEEEecccCccccCCceEEEEEe---CCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHcCCC----HHHHHH
Confidence 3346677777666655688899855322 134567999999998888777766544333221111112 346667
Q ss_pred HHHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEcccCcEEEEcCCeeeeCCCCCCC
Q 028938 109 KTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 109 ~~~~~i~~~~~~~~~~ggTtl~~~~i~--~~~l~~anvGDSRa~l~~~g~~~~LT~dH~~ 166 (201)
.+|+.+..... ....+|++++++. .++++++|+||+++|+++++++.+|+.+|.|
T Consensus 81 ~~n~~l~~~~~---~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~ 137 (242)
T 3pu9_A 81 AAHDFLYAMRD---GKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGGR 137 (242)
T ss_dssp HHHHHHHHHTT---TCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCCC
T ss_pred HHHHHHHhccC---CCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCcc
Confidence 77777765442 2356777776775 6799999999999999999999999999988
No 21
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=98.76 E-value=3.1e-07 Score=73.82 Aligned_cols=128 Identities=16% Similarity=0.101 Sum_probs=79.6
Q ss_pred CceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHH---HHHHHhhccC-CCCHHHHHHH
Q 028938 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHL---FSNILKEEEF-WVDPQRSISK 105 (201)
Q Consensus 30 ~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l---~~~l~~~~~~-~~~~~~~l~~ 105 (201)
..+.+++...... ...-|.+-+... .++..+++|+||.|++..|..++..+ +..+.+.... .......+.+
T Consensus 36 ~~~~~~~~~~p~~--~vgGD~yd~~~~---~~~~~~~~vaD~~GhG~~aa~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (255)
T 3f79_A 36 EGLEFSHRIIPSL--YLSGDFVDYFRV---DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKPSE 110 (255)
T ss_dssp TTEEEEEEEECSS--SSCSEEEEEEEE---TTTEEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHHTTCCC----CHHH
T ss_pred CCEEEEEEEeEhh--hcCceEEeEEEe---CCCEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCHHH
Confidence 3466666665553 578898743322 13467899999988776666655443 3333332110 0112234567
Q ss_pred HHHHHHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEccc-CcEEEEcCCeeeeCCCCCCC
Q 028938 106 AYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGD-SRAVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 106 a~~~~~~~i~~~~~~~~~~ggTtl~~~~i~--~~~l~~anvGD-SRa~l~~~g~~~~LT~dH~~ 166 (201)
++..+|+.+.+. ...+++|++++++. .++++++|+|+ ++.|+.++|++.+|+.+|.|
T Consensus 111 ~l~~ln~~l~~~----~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~ 170 (255)
T 3f79_A 111 VLAHINRGLINT----KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP 170 (255)
T ss_dssp HHHHHHHHHBTT----BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC----
T ss_pred HHHHHHHHHHhc----CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce
Confidence 778888888653 24577888887884 67999999999 56899999999999998877
No 22
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=98.69 E-value=1.9e-06 Score=66.70 Aligned_cols=118 Identities=10% Similarity=0.029 Sum_probs=82.2
Q ss_pred CceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHH
Q 028938 30 GLVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYEK 109 (201)
Q Consensus 30 ~~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~l~~a~~~ 109 (201)
..+.++.++........+.|.+.+... ++..+++|+||.|.+..|..++..+...+.+.. ...+ .+.+..
T Consensus 2 ~~~~~~~~~~p~~~~~v~GD~y~~~~~----~~~~~~~v~Dv~GhG~~Aa~~s~~~~~~l~~~~--~~~p----~~il~~ 71 (193)
T 3zt9_A 2 EKLEVGIYTRAREGEIACGDACLVKRV----EGVIFLAVGDGIGHGPEAARAAEIAIASMESSM--NTGL----VNIFQL 71 (193)
T ss_dssp CCCCEEEEEECCTTCSSCSEEEEEEEE----TTEEEEEEEEESSSHHHHHHHHHHHHHHHHHHT--TSCH----HHHHHH
T ss_pred CccEEEEEEeccCCCCCCCCeEEEEEe----CCEEEEEEEeCCCCCHHHHHHHHHHHHHHHHcc--cCCH----HHHHHH
Confidence 357788888876655789999866432 346889999999988888777766666554432 1234 345566
Q ss_pred HHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEcccCcEEEEcCCeeeeCCCCC
Q 028938 110 TDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLSTAGVAVQMTTDH 164 (201)
Q Consensus 110 ~~~~i~~~~~~~~~~ggTtl~~~~i~--~~~l~~anvGDSRa~l~~~g~~~~LT~dH 164 (201)
+|+.+... .++|++++.+. .+++.++|+|+++.|+++++++.++...+
T Consensus 72 ln~~l~~~-------~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~ 121 (193)
T 3zt9_A 72 CHRELRGT-------RGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATP 121 (193)
T ss_dssp HHHHHTTS-------SCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBC
T ss_pred HHHHHhcc-------CceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCC
Confidence 77777532 23444444555 56999999999999999998887776443
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=97.37 E-value=0.0087 Score=51.01 Aligned_cols=125 Identities=10% Similarity=0.004 Sum_probs=73.7
Q ss_pred CceEEEEEeeecCC-CCCCCccEEEEEeecCCCceEEEEEEcCCCCChHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHH
Q 028938 30 GLVKFGFSLVKGKA-NHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVPAYLQKHLFSNILKEEEFWVDPQRSISKAYE 108 (201)
Q Consensus 30 ~~~~~~~~s~~G~r-r~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a~~~~~~l~~~l~~~~~~~~~~~~~l~~a~~ 108 (201)
..+.++........ ....-|.|-+... + +..+++|.|+.|.+-.|..++..+...+.........+. +.+.
T Consensus 34 ~~~~~~~~y~P~~~~~~vgGD~y~~~~~--~--~~~~~~v~Dv~GhGv~AA~~~~~~~~~l~~~~~~~~~p~----~il~ 105 (399)
T 3ke6_A 34 PGADIAAEYLVAAEDTAAGGDWFDALAL--G--DRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYTVV----EALE 105 (399)
T ss_dssp TTEEEEEEEECSSSSCSCCSEEEEEEEC--S--SEEEEEEEECSSCSHHHHHHHHHHHHHHHHHHHTTCCHH----HHHH
T ss_pred CCeEEEEEEEECCCCCCCCCceEEEEEE--C--CEEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCHH----HHHH
Confidence 34556555544431 1356788744322 2 268899999988666665555444333322111112343 3445
Q ss_pred HHHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEcccCcEEEEc-CCeeeeCCCCCCC
Q 028938 109 KTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSRAVLST-AGVAVQMTTDHEP 166 (201)
Q Consensus 109 ~~~~~i~~~~~~~~~~ggTtl~~~~i~--~~~l~~anvGDSRa~l~~-~g~~~~LT~dH~~ 166 (201)
.+|+ +..... ....+|++++.++ .+++.++|+|..+.|+++ +|++..+..++.+
T Consensus 106 ~ln~-~~~~~~---~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~ 162 (399)
T 3ke6_A 106 AVDR-FHKQVP---GSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAG 162 (399)
T ss_dssp HHHH-HGGGST---TCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCC
T ss_pred HHHH-HHHhcC---CCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCc
Confidence 5565 333221 2345565555664 679999999999999998 7788888877644
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=93.58 E-value=1 Score=37.53 Aligned_cols=123 Identities=15% Similarity=0.108 Sum_probs=65.2
Q ss_pred ceEEEEEeeecCCCCCCCccEEEEEeecCCCceEEEEEEcCCCCChHH---HHHHHHHHHHHHhhcc-----CCCCHHHH
Q 028938 31 LVKFGFSLVKGKANHPMEDYHVAKFVQLQGHELGLFAIYDGHLGETVP---AYLQKHLFSNILKEEE-----FWVDPQRS 102 (201)
Q Consensus 31 ~~~~~~~s~~G~rr~~neD~~~~~~~~~~~~~~~~~~V~DGhgG~~~a---~~~~~~l~~~l~~~~~-----~~~~~~~~ 102 (201)
.+.+....... ....-|.+-+.. . .++..+++|.|+.|-+-.| ..+...++..+..... ...++
T Consensus 176 ~~~~~~~~~p~--~~vgGD~yd~~~-~--~~~~~~~~i~Dv~GhGv~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~p--- 247 (394)
T 3eq2_A 176 GLEFSHRIIPS--LYLSGDFVDYFR-V--DERRVAFYLADVSGHGASSAFVTVLLKFMTTRLLYESRRNGTLPEFKP--- 247 (394)
T ss_dssp TEEEEEEEC-------CCCEEECCE-E--TTTEEEEEEEEESSCSTTTHHHHHHHHHHHHHHHHHSCSSCSSSSCCH---
T ss_pred CeEEEEEeccc--hhcCccEEeEEE-e--CCCcEEEEEEECCCCChHHHHHHHHHHHHHHHHHHhhhccCCcccCCH---
Confidence 45555444433 245678763221 1 2346788999985522222 2333344454443321 11133
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCccceEEEEEEe--CCEEEEEEcccCc-EEEEcCCeeeeCCCCCCC
Q 028938 103 ISKAYEKTDQAILSHSSDLGRGGSTAVTAILIN--GQRLWVANVGDSR-AVLSTAGVAVQMTTDHEP 166 (201)
Q Consensus 103 l~~a~~~~~~~i~~~~~~~~~~ggTtl~~~~i~--~~~l~~anvGDSR-a~l~~~g~~~~LT~dH~~ 166 (201)
.+.+..+|+.+.... .....|++.+.+. .+++.++|+|-.. .++.++|++..|.....|
T Consensus 248 -~~~l~~ln~~l~~~~----~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~p 309 (394)
T 3eq2_A 248 -SEVLAHINRGLINTK----LGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP 309 (394)
T ss_dssp -HHHHHHHHHHHHHTT----CCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC--C
T ss_pred -HHHHHHHHHHHhccC----cCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCce
Confidence 444556677776422 1233455444554 6799999999854 677788999888766555
No 25
>1hq0_A CNF1, cytotoxic necrotizing factor 1; beta sandwich, RHO deamidase, RHO transglutaminase, toxin; 1.83A {Escherichia coli} SCOP: d.194.1.1 PDB: 1hzg_A
Probab=28.02 E-value=44 Score=26.90 Aligned_cols=23 Identities=17% Similarity=0.333 Sum_probs=17.7
Q ss_pred CCccceEEEEEEeCCEEEEEEcccC
Q 028938 123 RGGSTAVTAILINGQRLWVANVGDS 147 (201)
Q Consensus 123 ~~ggTtl~~~~i~~~~l~~anvGDS 147 (201)
.+|||++++ ++++.+|..|+|-+
T Consensus 144 LSGCT~v~A--~K~~~ly~~HtGk~ 166 (295)
T 1hq0_A 144 LSGCTTIVA--RKEGYIYKVHTGTT 166 (295)
T ss_dssp BSSCEEEEE--EETTEEEEEEEEES
T ss_pred ccCcEEEEE--EcCCeEEEEEcCCC
Confidence 456666554 68899999999975
No 26
>1b33_N Phycobilisome 7.8 KD linker polypeptide; light-harvesting protein, cyanobacteria, allophycocyanin, linker polypeptides; HET: BLA CYC; 2.30A {Mastigocladus laminosus} SCOP: d.30.1.1
Probab=26.06 E-value=39 Score=21.01 Aligned_cols=16 Identities=25% Similarity=0.380 Sum_probs=14.8
Q ss_pred hhHHHHHHhCCCEEEc
Q 028938 167 NTERGSIEDKGGFVSN 182 (201)
Q Consensus 167 ~~E~~RI~~~gG~v~~ 182 (201)
..|.+||.+.||.|..
T Consensus 37 s~emQrI~r~GGkIvS 52 (67)
T 1b33_N 37 FREQQRIQKMGGKIVK 52 (67)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHcCCeEEE
Confidence 7899999999999987
No 27
>2h3o_A MERF; membrane protein, alpha-helix, bicelle; NMR {Morganella morganii} PDB: 2lj2_A
Probab=25.59 E-value=15 Score=22.51 Aligned_cols=7 Identities=29% Similarity=0.624 Sum_probs=0.0
Q ss_pred cccccch
Q 028938 3 SLCCFNA 9 (201)
Q Consensus 3 ~~~~~~~ 9 (201)
++|||.|
T Consensus 8 aLCC~tP 14 (61)
T 2h3o_A 8 ALSSFTP 14 (61)
T ss_dssp -------
T ss_pred HHHHHHH
Confidence 4555543
Done!