Your job contains 1 sequence.
>028940
MPTFSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSF
RRRKKEKINLKSRLKKQVEESPPWFKNLLNFVELPPKDVIFRRLFLFAFMGGWSIMNSAE
GGPAFQVAVSLAACIYFLNEKTKSLARASIIGLGALASGWILGSVVVPMIPTVLIHPTWT
LELLTSLVAYFFLFLACTFFK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028940
(201 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178267 - symbol:CDF1 "CELL GROWTH DEFECT FACT... 886 9.6e-89 1
TAIR|locus:2080883 - symbol:AT3G51140 "AT3G51140" species... 345 2.0e-31 1
>TAIR|locus:2178267 [details] [associations]
symbol:CDF1 "CELL GROWTH DEFECT FACTOR 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008219 "cell death"
evidence=IDA] [GO:0009536 "plastid" evidence=IDA] GO:GO:0005739
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0008219 GO:GO:0009941
EMBL:AB006708 HOGENOM:HOG000243111 InterPro:IPR021788 Pfam:PF11833
EMBL:AY125520 EMBL:AY143835 EMBL:AB210817 IPI:IPI00538097
RefSeq:NP_197695.1 UniGene:At.43826 ProteinModelPortal:Q9FN50
SMR:Q9FN50 STRING:Q9FN50 PaxDb:Q9FN50 PRIDE:Q9FN50 ProMEX:Q9FN50
EnsemblPlants:AT5G23040.1 GeneID:832368 KEGG:ath:AT5G23040
TAIR:At5g23040 eggNOG:NOG262292 InParanoid:Q9FN50 OMA:QQYAGHE
PhylomeDB:Q9FN50 ProtClustDB:CLSN2686104 Genevestigator:Q9FN50
Uniprot:Q9FN50
Length = 258
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 164/201 (81%), Positives = 181/201 (90%)
Query: 1 MPTFSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSF 60
+PTF R +VWDPYKRLG+SPYASEEEIW SRNFLL+QY GHERSEESIE AFEKLLM+SF
Sbjct: 58 VPTFPRTRVWDPYKRLGVSPYASEEEIWASRNFLLQQYAGHERSEESIEGAFEKLLMSSF 117
Query: 61 RRRKKEKINLKSRLKKQVEESPPWFKNLLNFVELPPKDVIFRRLFLFAFMGGWSIMNSAE 120
RRKK KINLKS+LKK+VEESPPW K LL+FVE+PP D IFRRLFLFAFMGGWSIMNSAE
Sbjct: 118 IRRKKTKINLKSKLKKKVEESPPWLKALLDFVEMPPMDTIFRRLFLFAFMGGWSIMNSAE 177
Query: 121 GGPAFQVAVSLAACIYFLNEKTKSLARASIIGLGALASGWILGSVVVPMIPTVLIHPTWT 180
GGPAFQVAVSLAAC+YFLNEKTKSL RA +IG+GAL +GW GS+++PMIPT LI PTWT
Sbjct: 178 GGPAFQVAVSLAACVYFLNEKTKSLGRACLIGIGALVAGWFCGSLIIPMIPTFLIQPTWT 237
Query: 181 LELLTSLVAYFFLFLACTFFK 201
LELLTSLVAY FLFL+CTF K
Sbjct: 238 LELLTSLVAYVFLFLSCTFLK 258
>TAIR|locus:2080883 [details] [associations]
symbol:AT3G51140 "AT3G51140" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009706
"chloroplast inner membrane" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0006399 "tRNA
metabolic process" evidence=RCA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=RCA] [GO:0009658 "chloroplast
organization" evidence=RCA] [GO:0009793 "embryo development ending
in seed dormancy" evidence=RCA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009706 UniGene:At.859 EMBL:AY035099 EMBL:AY063061
EMBL:AY086657 IPI:IPI00519499 RefSeq:NP_566946.1 UniGene:At.860
ProteinModelPortal:Q94C78 SMR:Q94C78 STRING:Q94C78 PaxDb:Q94C78
PRIDE:Q94C78 EnsemblPlants:AT3G51140.1 GeneID:824278
KEGG:ath:AT3G51140 TAIR:At3g51140 eggNOG:NOG260359
HOGENOM:HOG000243111 InParanoid:Q94C78 OMA:GAFIFSW PhylomeDB:Q94C78
ProtClustDB:CLSN2689106 ArrayExpress:Q94C78 Genevestigator:Q94C78
InterPro:IPR021788 Pfam:PF11833 Uniprot:Q94C78
Length = 278
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 75/203 (36%), Positives = 125/203 (61%)
Query: 4 FSRIKVWDPYKRLGISPYASEEEIWGSRNFLLEQYTGHERSEESIEAAFEKLLMTSFRRR 63
F RI V DPYKRLGIS ASE+EI G+RNFL++QY GH+ S ++IE+A +K++M F R
Sbjct: 83 FPRINVKDPYKRLGISRMASEDEIQGARNFLIQQYAGHKPSVDAIESAHDKIIMQKFHER 142
Query: 64 KKEKINLKSRLKKQVEESPPWFKNLLNFV----ELPPKDVIFRRLFLFAFMGGWSIMNSA 119
K KI++ +++ QV +S ++NFV + PP V+ + FA +G +++
Sbjct: 143 KNPKIDISKKVR-QVRQS-----KVVNFVFERFQTPPNAVLVKTAVTFAVLGVLTVLFPT 196
Query: 120 EGGPAFQVAVSLAACIYFLNEKTKSLARASIIGLGALASGWILGS-VVVPMIPTVLIHPT 178
E GP QV +SL A YF++++ + + G GA W++G+ ++V +IP + P
Sbjct: 197 EEGPTLQVLLSLIATFYFIHQRLQKKLWTFLYGAGAFIFSWLVGTFLMVSVIPPFIKGPR 256
Query: 179 WTLELLTSLVAYFFLFLACTFFK 201
E+++SL++Y L++A ++ +
Sbjct: 257 G-FEVMSSLLSYVLLWVASSYLR 278
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.427 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 201 201 0.00089 111 3 11 22 0.42 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 2
No. of states in DFA: 600 (64 KB)
Total size of DFA: 164 KB (2096 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.18u 0.11s 20.29t Elapsed: 00:00:01
Total cpu time: 20.18u 0.11s 20.29t Elapsed: 00:00:01
Start: Thu May 9 23:12:56 2013 End: Thu May 9 23:12:57 2013