Query 028944
Match_columns 201
No_of_seqs 125 out of 1562
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 07:43:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028944.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028944hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2obi_A PHGPX, GPX-4, phospholi 100.0 3.9E-34 1.3E-38 212.7 17.8 159 42-201 23-183 (183)
2 2gs3_A PHGPX, GPX-4, phospholi 100.0 4.6E-34 1.6E-38 212.8 16.7 159 42-201 25-185 (185)
3 2v1m_A Glutathione peroxidase; 100.0 4.9E-34 1.7E-38 208.9 15.9 158 42-200 7-165 (169)
4 2f8a_A Glutathione peroxidase 100.0 4.5E-34 1.5E-38 216.8 15.8 160 42-201 22-206 (208)
5 2p5q_A Glutathione peroxidase 100.0 9.7E-34 3.3E-38 207.5 15.4 160 42-201 8-167 (170)
6 2i3y_A Epididymal secretory gl 100.0 1.1E-33 3.9E-38 215.3 15.7 159 42-201 31-210 (215)
7 3dwv_A Glutathione peroxidase- 100.0 1.9E-34 6.5E-39 215.3 11.0 158 42-201 22-182 (187)
8 2r37_A Glutathione peroxidase 100.0 3.3E-33 1.1E-37 211.7 15.2 158 42-200 13-191 (207)
9 3kij_A Probable glutathione pe 100.0 4.4E-33 1.5E-37 206.6 15.3 151 42-200 14-168 (180)
10 2p31_A CL683, glutathione pero 100.0 7.8E-33 2.7E-37 205.5 15.0 149 42-201 25-180 (181)
11 2vup_A Glutathione peroxidase- 100.0 8.5E-33 2.9E-37 206.8 13.7 162 38-200 20-183 (190)
12 3cmi_A Peroxiredoxin HYR1; thi 100.0 3.6E-32 1.2E-36 200.0 11.5 152 42-200 8-166 (171)
13 4hde_A SCO1/SENC family lipopr 100.0 4.8E-31 1.6E-35 194.1 12.0 152 42-200 8-168 (170)
14 3eyt_A Uncharacterized protein 100.0 2.1E-30 7E-35 187.7 10.1 145 42-200 2-150 (158)
15 3lor_A Thiol-disulfide isomera 100.0 2E-30 6.8E-35 188.0 9.0 145 42-200 5-153 (160)
16 4g2e_A Peroxiredoxin; redox pr 100.0 1.8E-30 6.2E-35 188.6 7.9 145 42-200 6-156 (157)
17 3ewl_A Uncharacterized conserv 100.0 2.9E-29 9.9E-34 178.5 11.2 134 42-200 3-139 (142)
18 3fw2_A Thiol-disulfide oxidore 100.0 8.7E-29 3E-33 177.9 12.7 135 42-200 7-146 (150)
19 3eur_A Uncharacterized protein 100.0 1.6E-28 5.6E-33 174.9 13.4 133 42-199 7-142 (142)
20 4fo5_A Thioredoxin-like protei 100.0 5.5E-29 1.9E-33 177.6 10.9 134 42-200 9-143 (143)
21 1xzo_A BSSCO, hypothetical pro 100.0 3.7E-29 1.3E-33 183.8 10.2 152 42-201 9-171 (174)
22 2f9s_A Thiol-disulfide oxidore 100.0 5.2E-29 1.8E-33 179.1 10.2 136 42-201 2-137 (151)
23 3lwa_A Secreted thiol-disulfid 100.0 7.2E-29 2.5E-33 184.0 11.0 140 41-200 32-179 (183)
24 3u5r_E Uncharacterized protein 100.0 3.5E-29 1.2E-33 191.1 9.6 142 42-200 34-185 (218)
25 3gkn_A Bacterioferritin comigr 100.0 8.2E-29 2.8E-33 180.4 9.4 135 41-189 8-146 (163)
26 3drn_A Peroxiredoxin, bacterio 100.0 1.1E-28 3.9E-33 179.6 10.1 122 42-188 4-131 (161)
27 3me7_A Putative uncharacterize 100.0 3.7E-28 1.3E-32 178.6 12.7 151 42-200 3-160 (170)
28 2l5o_A Putative thioredoxin; s 100.0 1.2E-28 4E-33 177.4 9.6 136 42-200 4-139 (153)
29 2lrn_A Thiol:disulfide interch 100.0 2.4E-28 8.2E-33 176.0 10.7 134 42-199 5-138 (152)
30 2ggt_A SCO1 protein homolog, m 100.0 1.3E-28 4.4E-33 179.2 9.1 143 45-200 2-159 (164)
31 3erw_A Sporulation thiol-disul 100.0 5.8E-28 2E-32 171.7 11.9 135 42-198 11-145 (145)
32 3kcm_A Thioredoxin family prot 100.0 6.2E-28 2.1E-32 173.8 12.2 136 42-200 4-141 (154)
33 3fkf_A Thiol-disulfide oxidore 100.0 1.2E-27 4.2E-32 170.7 13.1 136 42-201 7-145 (148)
34 3or5_A Thiol:disulfide interch 100.0 4.9E-28 1.7E-32 176.1 11.1 140 42-200 10-149 (165)
35 1jfu_A Thiol:disulfide interch 100.0 8.9E-28 3E-32 178.5 12.7 140 42-200 36-178 (186)
36 3raz_A Thioredoxin-related pro 100.0 3.2E-28 1.1E-32 175.1 9.9 135 45-200 4-138 (151)
37 2cvb_A Probable thiol-disulfid 100.0 3.4E-28 1.2E-32 181.1 10.1 141 42-200 9-157 (188)
38 2k6v_A Putative cytochrome C o 100.0 2.9E-29 1E-33 183.9 4.2 150 42-201 12-172 (172)
39 2ywi_A Hypothetical conserved 100.0 1.8E-28 6.2E-33 183.6 8.5 142 42-200 20-172 (196)
40 3hcz_A Possible thiol-disulfid 100.0 3.5E-28 1.2E-32 173.6 9.5 134 42-198 7-142 (148)
41 2rli_A SCO2 protein homolog, m 100.0 3.5E-28 1.2E-32 178.1 9.6 146 47-200 7-162 (171)
42 3gl3_A Putative thiol:disulfid 100.0 1E-27 3.5E-32 172.3 11.8 134 42-200 5-140 (152)
43 4gqc_A Thiol peroxidase, perox 99.9 1.5E-29 5.2E-34 185.0 1.9 143 42-199 7-157 (164)
44 3ixr_A Bacterioferritin comigr 99.9 3.5E-28 1.2E-32 180.1 9.0 134 42-189 23-162 (179)
45 2yzh_A Probable thiol peroxida 99.9 1.7E-27 5.7E-32 175.0 12.0 141 42-201 23-171 (171)
46 2lrt_A Uncharacterized protein 99.9 2.6E-27 8.7E-32 170.9 11.3 129 42-193 11-139 (152)
47 3ha9_A Uncharacterized thiored 99.9 1.3E-27 4.5E-32 174.2 9.9 138 42-201 13-163 (165)
48 3kh7_A Thiol:disulfide interch 99.9 2.4E-27 8.1E-32 175.2 10.9 134 40-200 30-165 (176)
49 1we0_A Alkyl hydroperoxide red 99.9 2.5E-27 8.6E-32 176.5 11.2 133 42-199 3-154 (187)
50 2lja_A Putative thiol-disulfid 99.9 5.3E-27 1.8E-31 168.5 12.4 136 42-200 5-141 (152)
51 2c0d_A Thioredoxin peroxidase 99.9 1.4E-27 5E-32 182.5 9.9 143 37-199 22-181 (221)
52 1n8j_A AHPC, alkyl hydroperoxi 99.9 7E-28 2.4E-32 179.6 7.7 139 42-199 3-153 (186)
53 2bmx_A Alkyl hydroperoxidase C 99.9 2.9E-27 9.8E-32 177.4 10.7 133 42-199 6-167 (195)
54 1xvw_A Hypothetical protein RV 99.9 3.9E-27 1.3E-31 170.9 10.7 124 42-190 11-144 (160)
55 2b7k_A SCO1 protein; metalloch 99.9 1.3E-27 4.6E-32 180.0 8.2 152 42-199 15-176 (200)
56 1psq_A Probable thiol peroxida 99.9 4.3E-27 1.5E-31 171.6 10.1 137 42-199 18-162 (163)
57 3p7x_A Probable thiol peroxida 99.9 5.4E-27 1.8E-31 171.6 10.1 137 42-200 22-166 (166)
58 1zof_A Alkyl hydroperoxide-red 99.9 3E-27 1E-31 177.7 8.9 134 42-199 3-158 (198)
59 1lu4_A Soluble secreted antige 99.9 8.5E-27 2.9E-31 164.1 10.7 131 44-201 2-135 (136)
60 1q98_A Thiol peroxidase, TPX; 99.9 7.8E-27 2.7E-31 170.6 10.7 128 42-186 19-148 (165)
61 2b5x_A YKUV protein, TRXY; thi 99.9 3.1E-27 1.1E-31 168.5 8.0 139 42-200 3-143 (148)
62 1zzo_A RV1677; thioredoxin fol 99.9 1E-26 3.6E-31 163.4 10.4 132 43-201 2-134 (136)
63 2i81_A 2-Cys peroxiredoxin; st 99.9 3.7E-27 1.3E-31 179.3 8.6 133 42-199 23-177 (213)
64 2pn8_A Peroxiredoxin-4; thiore 99.9 4.3E-27 1.5E-31 178.7 8.6 140 41-199 20-174 (211)
65 1uul_A Tryparedoxin peroxidase 99.9 9.4E-27 3.2E-31 175.6 9.9 133 42-199 8-162 (202)
66 4evm_A Thioredoxin family prot 99.9 3.4E-26 1.2E-30 160.7 11.8 136 45-200 1-137 (138)
67 2h01_A 2-Cys peroxiredoxin; th 99.9 7.4E-27 2.5E-31 174.7 8.8 133 42-199 2-156 (192)
68 3ia1_A THIO-disulfide isomeras 99.9 5.7E-27 2E-31 168.8 7.8 136 42-200 7-142 (154)
69 2hyx_A Protein DIPZ; thioredox 99.9 4.1E-27 1.4E-31 190.9 7.3 141 41-200 52-197 (352)
70 2a4v_A Peroxiredoxin DOT5; yea 99.9 4.9E-27 1.7E-31 170.5 6.7 122 42-190 9-139 (159)
71 2b1k_A Thiol:disulfide interch 99.9 1.6E-26 5.6E-31 168.9 9.2 133 41-200 23-158 (168)
72 1qmv_A Human thioredoxin perox 99.9 2.1E-26 7.2E-31 172.9 10.0 132 42-198 7-159 (197)
73 1tp9_A Peroxiredoxin, PRX D (t 99.9 1.3E-26 4.5E-31 169.0 8.4 131 42-187 6-146 (162)
74 3zrd_A Thiol peroxidase; oxido 99.9 1.4E-26 4.9E-31 174.4 8.9 129 41-187 53-184 (200)
75 3ztl_A Thioredoxin peroxidase; 99.9 1.1E-26 3.8E-31 177.7 7.9 125 41-190 41-182 (222)
76 3hdc_A Thioredoxin family prot 99.9 3.6E-26 1.2E-30 165.6 10.0 132 41-199 16-149 (158)
77 1zye_A Thioredoxin-dependent p 99.9 4.5E-26 1.5E-30 174.1 10.4 133 42-199 29-182 (220)
78 2jsy_A Probable thiol peroxida 99.9 9E-27 3.1E-31 170.3 5.6 138 42-200 20-165 (167)
79 2h30_A Thioredoxin, peptide me 99.9 2.2E-26 7.4E-31 167.3 7.5 138 43-201 17-155 (164)
80 1xvq_A Thiol peroxidase; thior 99.9 4.7E-26 1.6E-30 168.0 9.2 138 42-198 20-161 (175)
81 2ls5_A Uncharacterized protein 99.9 1.2E-27 4E-32 173.5 0.0 136 42-200 9-146 (159)
82 3qpm_A Peroxiredoxin; oxidored 99.9 5E-26 1.7E-30 176.0 8.5 129 41-188 49-188 (240)
83 3mng_A Peroxiredoxin-5, mitoch 99.9 8.1E-26 2.8E-30 166.5 9.0 144 41-198 16-171 (173)
84 2wfc_A Peroxiredoxin 5, PRDX5; 99.9 7.5E-26 2.6E-30 165.8 8.8 132 42-188 5-143 (167)
85 3uma_A Hypothetical peroxiredo 99.9 7.5E-26 2.6E-30 168.3 7.6 144 41-199 27-183 (184)
86 3tjj_A Peroxiredoxin-4; thiore 99.9 1.6E-25 5.5E-30 174.3 9.7 129 41-188 63-202 (254)
87 2v2g_A Peroxiredoxin 6; oxidor 99.9 8.2E-26 2.8E-30 173.8 7.2 145 42-199 5-162 (233)
88 1kng_A Thiol:disulfide interch 99.9 9.3E-26 3.2E-30 162.5 6.8 133 42-200 10-150 (156)
89 1prx_A HORF6; peroxiredoxin, h 99.9 2E-25 6.7E-30 171.0 8.1 145 42-199 7-166 (224)
90 1xcc_A 1-Cys peroxiredoxin; un 99.9 2E-25 6.7E-30 170.5 7.1 144 42-199 5-163 (220)
91 1nm3_A Protein HI0572; hybrid, 99.9 1.4E-24 4.7E-29 167.9 8.4 132 42-188 5-144 (241)
92 2pwj_A Mitochondrial peroxired 99.9 9.4E-25 3.2E-29 160.6 6.6 132 42-188 9-155 (171)
93 3keb_A Probable thiol peroxida 99.9 8.8E-24 3E-28 160.7 12.0 137 41-198 23-172 (224)
94 3a2v_A Probable peroxiredoxin; 99.9 1.1E-24 3.9E-29 168.7 6.7 140 42-199 7-159 (249)
95 1i5g_A Tryparedoxin II; electr 99.9 2.2E-24 7.5E-29 153.7 7.5 121 42-185 3-127 (144)
96 3sbc_A Peroxiredoxin TSA1; alp 99.9 3E-24 1E-28 162.2 6.5 145 35-198 19-177 (216)
97 3s9f_A Tryparedoxin; thioredox 99.9 1.7E-24 6E-29 158.2 4.9 120 42-185 24-147 (165)
98 1o8x_A Tryparedoxin, TRYX, TXN 99.9 6.3E-24 2.2E-28 151.7 7.5 121 42-186 4-128 (146)
99 2lus_A Thioredoxion; CR-Trp16, 99.8 4.7E-25 1.6E-29 156.6 0.0 121 44-185 2-126 (143)
100 1o73_A Tryparedoxin; electron 99.9 1.2E-23 4.1E-28 149.7 6.7 120 42-185 4-127 (144)
101 3tue_A Tryparedoxin peroxidase 99.9 2.8E-23 9.6E-28 157.2 7.0 140 41-198 27-181 (219)
102 4eo3_A Bacterioferritin comigr 99.9 2.1E-22 7.3E-27 161.7 10.0 121 45-190 3-124 (322)
103 4f82_A Thioredoxin reductase; 99.8 1.9E-21 6.4E-26 142.6 6.2 131 42-187 12-158 (176)
104 1xiy_A Peroxiredoxin, pfaop; a 99.8 1.5E-19 5E-24 133.7 5.9 130 42-186 3-153 (182)
105 2xhf_A Peroxiredoxin 5; oxidor 99.8 2.3E-19 8E-24 131.2 6.5 133 41-188 15-153 (171)
106 2l57_A Uncharacterized protein 99.7 4.6E-18 1.6E-22 118.2 6.5 109 45-200 5-115 (126)
107 2fwh_A Thiol:disulfide interch 99.7 5.6E-19 1.9E-23 124.4 1.7 114 42-199 6-125 (134)
108 3hxs_A Thioredoxin, TRXP; elec 99.7 3.5E-17 1.2E-21 115.8 8.2 103 51-201 36-138 (141)
109 3ul3_B Thioredoxin, thioredoxi 99.7 9.5E-17 3.2E-21 111.9 8.5 107 43-199 21-127 (128)
110 2ju5_A Thioredoxin disulfide i 99.6 3.6E-17 1.2E-21 117.9 2.3 119 42-200 26-150 (154)
111 3p2a_A Thioredoxin 2, putative 99.6 1E-15 3.6E-20 109.2 5.8 111 42-200 31-141 (148)
112 1nsw_A Thioredoxin, TRX; therm 99.6 2.5E-15 8.7E-20 100.6 6.0 89 65-201 16-104 (105)
113 3f9u_A Putative exported cytoc 99.6 3.6E-16 1.2E-20 114.4 1.9 117 59-199 40-163 (172)
114 3fk8_A Disulphide isomerase; A 99.6 1.1E-15 3.8E-20 107.0 4.3 95 64-199 27-130 (133)
115 2voc_A Thioredoxin; electron t 99.6 2.3E-15 7.9E-20 102.4 5.7 89 65-201 16-104 (112)
116 3die_A Thioredoxin, TRX; elect 99.6 5.8E-15 2E-19 98.9 7.2 89 65-201 18-106 (106)
117 3zzx_A Thioredoxin; oxidoreduc 99.6 3.5E-15 1.2E-19 100.6 6.0 87 63-199 17-103 (105)
118 3qfa_C Thioredoxin; protein-pr 99.6 3.1E-15 1.1E-19 102.5 5.7 88 64-201 29-116 (116)
119 1z6n_A Hypothetical protein PA 99.5 1.5E-15 5E-20 110.9 3.2 83 60-188 48-130 (167)
120 4euy_A Uncharacterized protein 99.5 9.3E-15 3.2E-19 98.1 6.8 88 65-201 17-104 (105)
121 2djj_A PDI, protein disulfide- 99.5 1.6E-14 5.4E-19 99.2 7.6 101 51-200 9-115 (121)
122 1dby_A Chloroplast thioredoxin 99.5 1.7E-14 5.9E-19 96.8 7.4 89 65-201 18-106 (107)
123 3f3q_A Thioredoxin-1; His TAG, 99.5 9.6E-15 3.3E-19 98.9 6.0 87 65-201 23-109 (109)
124 3tco_A Thioredoxin (TRXA-1); d 99.5 4.4E-15 1.5E-19 99.9 4.2 89 65-201 20-108 (109)
125 2l5l_A Thioredoxin; structural 99.5 7.1E-15 2.4E-19 103.4 5.4 87 65-199 37-123 (136)
126 2trx_A Thioredoxin; electron t 99.5 1.1E-14 3.8E-19 98.0 5.9 100 53-200 6-106 (108)
127 2kuc_A Putative disulphide-iso 99.5 2.6E-15 8.9E-20 104.6 2.5 97 58-199 19-118 (130)
128 2dml_A Protein disulfide-isome 99.5 3.4E-14 1.2E-18 98.8 8.2 88 65-199 34-121 (130)
129 2o8v_B Thioredoxin 1; disulfid 99.5 1.9E-14 6.3E-19 100.4 6.7 98 55-200 28-126 (128)
130 3gix_A Thioredoxin-like protei 99.5 4.3E-15 1.5E-19 106.4 3.3 87 65-199 22-118 (149)
131 3cxg_A Putative thioredoxin; m 99.5 2.4E-15 8.3E-20 105.6 1.9 100 51-200 25-127 (133)
132 2pu9_C TRX-F, thioredoxin F-ty 99.5 2E-14 6.9E-19 97.3 6.4 91 61-200 19-109 (111)
133 1thx_A Thioredoxin, thioredoxi 99.5 2.7E-14 9.3E-19 96.9 7.0 101 52-200 10-111 (115)
134 2i4a_A Thioredoxin; acidophIle 99.5 3.2E-14 1.1E-18 95.4 7.1 102 52-201 5-107 (107)
135 1w4v_A Thioredoxin, mitochondr 99.5 1.7E-14 6E-19 99.1 5.7 88 65-200 30-117 (119)
136 1t00_A Thioredoxin, TRX; redox 99.5 1.8E-14 6.2E-19 97.6 5.7 88 65-200 22-109 (112)
137 1x5e_A Thioredoxin domain cont 99.5 3.2E-14 1.1E-18 98.5 7.1 99 52-200 10-108 (126)
138 2lst_A Thioredoxin; structural 99.3 1.3E-15 4.6E-20 106.1 0.0 101 56-201 9-115 (130)
139 2dj3_A Protein disulfide-isome 99.5 3.2E-14 1.1E-18 99.3 7.0 103 51-199 9-115 (133)
140 1zma_A Bacterocin transport ac 99.5 5.5E-14 1.9E-18 96.3 8.0 91 65-199 28-118 (118)
141 1fb6_A Thioredoxin M; electron 99.5 2.3E-14 7.8E-19 95.7 5.8 102 52-201 3-105 (105)
142 3d6i_A Monothiol glutaredoxin- 99.5 3.2E-14 1.1E-18 96.4 6.5 88 65-200 20-107 (112)
143 3qou_A Protein YBBN; thioredox 99.5 2.3E-14 8E-19 112.9 6.5 100 52-199 10-111 (287)
144 2dj0_A Thioredoxin-related tra 99.5 6.2E-14 2.1E-18 98.7 8.0 95 64-199 24-118 (137)
145 3m9j_A Thioredoxin; oxidoreduc 99.5 2.8E-14 9.6E-19 95.4 5.9 88 64-201 18-105 (105)
146 1xfl_A Thioredoxin H1; AT3G510 99.5 3.7E-14 1.3E-18 98.3 6.7 87 65-201 37-123 (124)
147 2yzu_A Thioredoxin; redox prot 99.5 9.1E-14 3.1E-18 93.2 8.0 89 65-201 17-105 (109)
148 2dj1_A Protein disulfide-isome 99.5 2E-14 7E-19 101.2 5.0 102 51-200 19-122 (140)
149 3hz4_A Thioredoxin; NYSGXRC, P 99.5 1.4E-14 4.7E-19 102.5 3.9 88 65-200 23-110 (140)
150 1ep7_A Thioredoxin CH1, H-type 99.5 4.4E-14 1.5E-18 95.6 6.1 86 66-200 24-109 (112)
151 2j23_A Thioredoxin; immune pro 99.5 3.1E-14 1E-18 98.2 4.8 89 65-201 32-120 (121)
152 2ppt_A Thioredoxin-2; thiredox 99.5 3.7E-14 1.3E-18 102.2 5.4 88 65-200 63-150 (155)
153 3gnj_A Thioredoxin domain prot 99.5 4.5E-14 1.5E-18 95.3 5.6 88 65-200 21-108 (111)
154 1faa_A Thioredoxin F; electron 99.5 6.7E-14 2.3E-18 96.6 6.5 89 63-200 34-122 (124)
155 2l6c_A Thioredoxin; oxidoreduc 99.5 8.3E-14 2.9E-18 94.3 6.8 87 65-200 18-104 (110)
156 1x5d_A Protein disulfide-isome 99.5 5.8E-14 2E-18 97.9 5.9 88 65-199 24-114 (133)
157 2oe3_A Thioredoxin-3; electron 99.5 1.2E-13 4E-18 94.3 7.0 86 65-200 29-114 (114)
158 1xwb_A Thioredoxin; dimerizati 99.5 1.6E-13 5.4E-18 91.7 7.5 89 64-201 18-106 (106)
159 2e0q_A Thioredoxin; electron t 99.5 6.8E-14 2.3E-18 93.0 5.6 87 65-200 15-101 (104)
160 2i1u_A Thioredoxin, TRX, MPT46 99.5 2.5E-13 8.5E-18 93.1 8.1 89 65-201 29-117 (121)
161 3d22_A TRXH4, thioredoxin H-ty 99.5 5.8E-14 2E-18 98.9 5.0 91 59-199 39-129 (139)
162 3apq_A DNAJ homolog subfamily 99.4 1.1E-14 3.9E-19 109.9 1.3 103 49-199 97-199 (210)
163 1syr_A Thioredoxin; SGPP, stru 99.4 2.1E-13 7.3E-18 92.5 7.6 87 65-201 25-111 (112)
164 2xc2_A Thioredoxinn; oxidoredu 99.4 5.8E-14 2E-18 96.0 4.7 90 61-201 28-117 (117)
165 2vim_A Thioredoxin, TRX; thior 99.4 9.6E-14 3.3E-18 92.5 5.5 89 63-201 16-104 (104)
166 2av4_A Thioredoxin-like protei 99.4 1.2E-13 4.3E-18 98.4 6.3 87 65-199 40-136 (160)
167 1oaz_A Thioredoxin 1; immune s 99.4 1.8E-13 6.1E-18 94.7 6.8 89 65-201 20-122 (123)
168 3h79_A Thioredoxin-like protei 99.4 8.8E-14 3E-18 96.5 5.2 103 51-199 17-125 (127)
169 1sen_A Thioredoxin-like protei 99.4 9.8E-16 3.4E-20 111.5 -5.0 109 46-199 27-145 (164)
170 3emx_A Thioredoxin; structural 99.4 8.5E-14 2.9E-18 97.8 5.0 92 68-200 33-124 (135)
171 2vlu_A Thioredoxin, thioredoxi 99.4 9.8E-14 3.3E-18 95.4 5.1 86 65-200 33-118 (122)
172 3uvt_A Thioredoxin domain-cont 99.4 2.2E-13 7.6E-18 91.8 6.6 87 66-199 21-109 (111)
173 2wz9_A Glutaredoxin-3; protein 99.4 1.5E-13 5.1E-18 98.6 6.1 86 65-200 31-116 (153)
174 1ti3_A Thioredoxin H, PTTRXH1; 99.4 1.9E-13 6.6E-18 92.4 6.3 87 64-200 24-110 (113)
175 1gh2_A Thioredoxin-like protei 99.4 9.3E-14 3.2E-18 93.4 4.6 86 65-200 20-105 (107)
176 1r26_A Thioredoxin; redox-acti 99.4 1.1E-13 3.6E-18 96.2 4.9 86 65-200 36-121 (125)
177 1v98_A Thioredoxin; oxidoreduc 99.4 2.4E-13 8.3E-18 95.9 6.3 102 51-200 35-136 (140)
178 1mek_A Protein disulfide isome 99.4 5.8E-14 2E-18 95.8 2.8 90 65-201 23-116 (120)
179 1qgv_A Spliceosomal protein U5 99.4 3.1E-13 1.1E-17 95.9 6.5 43 65-108 22-64 (142)
180 2yj7_A LPBCA thioredoxin; oxid 99.1 2E-14 6.7E-19 96.0 0.0 102 52-201 4-106 (106)
181 2qsi_A Putative hydrogenase ex 99.4 4.8E-13 1.6E-17 93.7 7.0 85 67-199 34-120 (137)
182 3dxb_A Thioredoxin N-terminall 99.4 4.3E-13 1.5E-17 102.0 7.0 102 51-200 14-116 (222)
183 2vm1_A Thioredoxin, thioredoxi 99.4 2.8E-13 9.6E-18 92.3 4.7 85 65-199 27-111 (118)
184 1fo5_A Thioredoxin; disulfide 99.4 1.8E-12 6E-17 83.2 7.7 83 67-201 3-85 (85)
185 2f51_A Thioredoxin; electron t 99.4 3.8E-13 1.3E-17 92.3 4.5 98 52-198 6-109 (118)
186 2qgv_A Hydrogenase-1 operon pr 99.4 9.5E-13 3.3E-17 92.5 6.5 88 65-199 33-122 (140)
187 3aps_A DNAJ homolog subfamily 99.3 1.8E-13 6.3E-18 94.0 1.6 87 65-199 20-110 (122)
188 3idv_A Protein disulfide-isome 99.3 1.6E-12 5.6E-17 99.4 5.8 100 51-198 17-118 (241)
189 2dbc_A PDCL2, unnamed protein 99.3 1.8E-12 6.3E-17 91.0 5.6 82 65-198 29-117 (135)
190 1nho_A Probable thioredoxin; b 99.3 2.2E-12 7.5E-17 82.7 5.1 82 68-201 3-84 (85)
191 1wmj_A Thioredoxin H-type; str 99.3 4.1E-13 1.4E-17 93.1 0.6 87 64-200 34-120 (130)
192 1a8l_A Protein disulfide oxido 99.3 6.3E-12 2.2E-16 95.4 6.3 88 66-200 134-224 (226)
193 3ira_A Conserved protein; meth 99.2 8E-12 2.7E-16 91.3 6.1 88 57-183 30-120 (173)
194 3evi_A Phosducin-like protein 99.2 1.8E-11 6E-16 84.1 7.0 82 66-199 23-111 (118)
195 3q6o_A Sulfhydryl oxidase 1; p 99.2 1.2E-11 4.2E-16 95.1 6.7 44 65-108 29-74 (244)
196 2es7_A Q8ZP25_salty, putative 99.2 8.2E-12 2.8E-16 88.5 5.1 84 67-199 35-122 (142)
197 3ph9_A Anterior gradient prote 99.2 1.4E-12 4.8E-17 93.4 0.9 76 65-187 43-120 (151)
198 3iv4_A Putative oxidoreductase 99.2 2.1E-11 7.2E-16 82.2 6.6 87 66-198 24-112 (112)
199 3ed3_A Protein disulfide-isome 99.2 3.9E-11 1.3E-15 95.2 8.9 91 65-200 34-140 (298)
200 3t58_A Sulfhydryl oxidase 1; o 99.2 7.1E-12 2.4E-16 106.4 4.6 105 51-199 14-124 (519)
201 1ilo_A Conserved hypothetical 99.2 2.3E-10 7.8E-15 71.9 9.6 36 69-105 2-37 (77)
202 2hls_A Protein disulfide oxido 99.2 5.3E-11 1.8E-15 91.7 7.7 86 63-199 135-223 (243)
203 3f8u_A Protein disulfide-isome 99.2 2.2E-11 7.7E-16 102.4 5.1 100 53-199 356-458 (481)
204 1a0r_P Phosducin, MEKA, PP33; 99.1 7.3E-11 2.5E-15 90.9 7.1 42 65-108 132-173 (245)
205 1sji_A Calsequestrin 2, calseq 99.1 1.7E-10 5.8E-15 93.4 9.1 87 65-200 27-120 (350)
206 3uem_A Protein disulfide-isome 99.1 1.3E-10 4.5E-15 94.2 8.3 87 65-199 266-354 (361)
207 1wou_A Thioredoxin -related pr 99.1 7.9E-11 2.7E-15 81.1 6.0 96 62-199 20-122 (123)
208 3kp8_A Vkorc1/thioredoxin doma 99.1 5.5E-13 1.9E-17 89.9 -5.0 39 58-96 4-42 (106)
209 2trc_P Phosducin, MEKA, PP33; 99.1 7.7E-11 2.6E-15 89.3 6.3 85 65-199 119-210 (217)
210 3idv_A Protein disulfide-isome 99.1 1.3E-10 4.5E-15 88.7 7.4 87 65-199 146-234 (241)
211 2r2j_A Thioredoxin domain-cont 99.1 3.4E-11 1.2E-15 98.6 4.1 101 52-199 8-114 (382)
212 2b5e_A Protein disulfide-isome 99.1 1.2E-10 4.3E-15 98.5 6.2 88 65-199 30-119 (504)
213 3dml_A Putative uncharacterize 99.1 1.4E-11 4.9E-16 83.9 0.2 90 65-199 17-107 (116)
214 3f8u_A Protein disulfide-isome 99.1 1.7E-10 6E-15 97.0 6.1 87 65-199 20-106 (481)
215 3gyk_A 27KDA outer membrane pr 99.0 2.1E-10 7.2E-15 83.6 4.7 133 55-200 11-171 (175)
216 2ywm_A Glutaredoxin-like prote 99.0 2.7E-10 9.1E-15 86.6 5.3 82 66-199 136-217 (229)
217 3apo_A DNAJ homolog subfamily 99.0 3.6E-10 1.2E-14 100.4 6.3 89 62-199 451-539 (780)
218 2b5e_A Protein disulfide-isome 99.0 2.8E-10 9.6E-15 96.3 5.1 100 51-199 360-464 (504)
219 3qcp_A QSOX from trypanosoma b 99.0 4.5E-10 1.6E-14 93.7 6.1 44 65-108 41-91 (470)
220 2dlx_A UBX domain-containing p 98.9 2.6E-09 8.7E-14 76.5 6.6 89 65-199 41-133 (153)
221 3hd5_A Thiol:disulfide interch 98.9 3.5E-09 1.2E-13 78.5 7.1 43 65-108 24-66 (195)
222 2e7p_A Glutaredoxin; thioredox 98.8 7.2E-10 2.4E-14 75.3 1.3 38 65-108 18-55 (116)
223 3h93_A Thiol:disulfide interch 98.8 2.6E-09 9E-14 79.0 4.1 43 65-108 24-66 (192)
224 3apo_A DNAJ homolog subfamily 98.8 7.9E-09 2.7E-13 91.8 7.2 88 65-200 132-219 (780)
225 3us3_A Calsequestrin-1; calciu 98.8 3.2E-08 1.1E-12 80.5 9.9 86 65-198 29-120 (367)
226 3ga4_A Dolichyl-diphosphooligo 98.7 2.2E-08 7.4E-13 73.2 6.3 44 65-108 36-90 (178)
227 1eej_A Thiol:disulfide interch 98.7 1.9E-08 6.4E-13 76.0 6.1 42 62-107 82-123 (216)
228 2djk_A PDI, protein disulfide- 98.7 2.6E-08 8.8E-13 69.4 6.0 86 65-199 22-112 (133)
229 1v58_A Thiol:disulfide interch 98.7 6.7E-08 2.3E-12 74.2 8.2 132 61-200 92-231 (241)
230 1ttz_A Conserved hypothetical 98.7 2.8E-08 9.6E-13 64.2 5.1 74 69-200 2-75 (87)
231 2znm_A Thiol:disulfide interch 98.7 1.8E-08 6.3E-13 74.5 4.8 43 65-108 21-63 (195)
232 1a8l_A Protein disulfide oxido 98.6 9.1E-08 3.1E-12 72.2 6.4 44 63-108 19-63 (226)
233 1hyu_A AHPF, alkyl hydroperoxi 98.6 3E-07 1E-11 78.2 9.6 82 65-199 116-197 (521)
234 1z6m_A Conserved hypothetical 98.5 1.1E-06 3.7E-11 63.7 10.7 50 58-108 19-70 (175)
235 2rem_A Disulfide oxidoreductas 98.5 1E-07 3.6E-12 70.2 5.1 42 65-107 24-65 (193)
236 2fgx_A Putative thioredoxin; N 98.4 4.6E-07 1.6E-11 60.7 6.3 38 68-108 30-67 (107)
237 1t3b_A Thiol:disulfide interch 98.4 4.5E-07 1.5E-11 68.2 6.7 38 65-106 85-122 (211)
238 2ywm_A Glutaredoxin-like prote 98.4 2.1E-07 7.1E-12 70.5 4.9 45 64-108 19-68 (229)
239 2k8s_A Thioredoxin; dimer, str 98.4 3.3E-07 1.1E-11 57.8 4.9 37 69-108 3-39 (80)
240 1ego_A Glutaredoxin; electron 98.3 2.3E-07 7.8E-12 59.0 3.0 38 69-108 2-39 (85)
241 4h86_A Peroxiredoxin type-2; o 98.3 1.1E-06 3.9E-11 64.8 6.9 138 30-185 17-179 (199)
242 1wjk_A C330018D20RIK protein; 98.3 3.7E-07 1.3E-11 60.3 3.4 38 66-108 15-52 (100)
243 1h75_A Glutaredoxin-like prote 98.2 1.9E-06 6.4E-11 54.2 5.6 32 70-108 3-34 (81)
244 3kp9_A Vkorc1/thioredoxin doma 98.2 2.3E-07 7.9E-12 72.9 1.1 38 58-95 189-226 (291)
245 2qc7_A ERP31, ERP28, endoplasm 98.2 2E-06 6.8E-11 65.9 6.1 89 65-199 21-116 (240)
246 2c0g_A ERP29 homolog, windbeut 98.1 4.3E-06 1.5E-10 64.3 6.1 40 65-108 32-75 (248)
247 4dvc_A Thiol:disulfide interch 98.1 2.5E-06 8.7E-11 62.0 4.6 42 65-107 20-61 (184)
248 3feu_A Putative lipoprotein; a 98.1 4.5E-07 1.5E-11 66.7 0.1 40 66-108 22-61 (185)
249 3l9v_A Putative thiol-disulfid 98.0 1.4E-06 4.9E-11 64.2 2.2 43 65-108 13-58 (189)
250 1r7h_A NRDH-redoxin; thioredox 98.0 1E-05 3.5E-10 49.8 4.5 32 70-108 3-34 (75)
251 3uem_A Protein disulfide-isome 97.9 1.3E-05 4.4E-10 64.6 5.6 41 67-108 136-176 (361)
252 1un2_A DSBA, thiol-disulfide i 97.9 1.9E-06 6.5E-11 64.1 0.2 53 55-108 100-157 (197)
253 1kte_A Thioltransferase; redox 97.8 1.8E-05 6.1E-10 52.2 4.5 36 69-106 13-48 (105)
254 3hz8_A Thiol:disulfide interch 97.8 1.4E-05 4.8E-10 59.0 4.2 43 65-108 23-65 (193)
255 3gv1_A Disulfide interchange p 97.7 7.5E-05 2.6E-09 52.7 6.7 37 64-106 12-48 (147)
256 2hls_A Protein disulfide oxido 97.7 3.2E-05 1.1E-09 59.2 4.9 43 66-108 25-73 (243)
257 3l9s_A Thiol:disulfide interch 97.7 1.8E-05 6.1E-10 58.4 2.9 43 65-108 20-65 (191)
258 3c7m_A Thiol:disulfide interch 97.7 2.9E-05 9.8E-10 56.9 3.6 43 65-108 16-59 (195)
259 2cq9_A GLRX2 protein, glutared 97.5 0.00026 8.8E-09 48.8 6.9 22 70-91 29-50 (130)
260 2lqo_A Putative glutaredoxin R 97.5 0.00039 1.3E-08 45.0 6.8 33 69-108 5-37 (92)
261 2hze_A Glutaredoxin-1; thiored 97.5 7E-05 2.4E-09 50.3 3.1 25 67-91 18-42 (114)
262 3nzn_A Glutaredoxin; structura 97.5 0.00011 3.9E-09 48.3 4.0 24 68-91 22-45 (103)
263 3rhb_A ATGRXC5, glutaredoxin-C 97.4 0.00029 9.8E-09 47.1 5.6 22 70-91 21-42 (113)
264 3f4s_A Alpha-DSBA1, putative u 97.4 0.00019 6.6E-09 54.3 4.9 50 59-108 32-83 (226)
265 3ic4_A Glutaredoxin (GRX-1); s 97.4 0.0005 1.7E-08 43.9 6.2 33 69-106 13-45 (92)
266 2ht9_A Glutaredoxin-2; thiored 97.3 0.00059 2E-08 48.0 6.8 22 70-91 51-72 (146)
267 3c1r_A Glutaredoxin-1; oxidize 97.3 0.0004 1.4E-08 47.0 5.6 35 70-108 27-62 (118)
268 3bci_A Disulfide bond protein 97.3 0.001 3.5E-08 48.3 8.2 43 65-107 10-54 (186)
269 3gha_A Disulfide bond formatio 97.3 0.00037 1.3E-08 51.7 5.4 48 61-108 24-73 (202)
270 2ec4_A FAS-associated factor 1 97.3 0.0011 3.9E-08 48.2 7.7 104 63-198 52-164 (178)
271 1fov_A Glutaredoxin 3, GRX3; a 97.3 0.00072 2.5E-08 42.0 5.9 22 70-91 3-24 (82)
272 2yan_A Glutaredoxin-3; oxidore 97.1 0.00077 2.6E-08 44.4 5.3 33 68-108 18-55 (105)
273 2khp_A Glutaredoxin; thioredox 97.0 0.0015 5.1E-08 41.6 5.8 33 69-108 7-39 (92)
274 3h8q_A Thioredoxin reductase 3 97.0 0.0015 5.2E-08 43.7 5.8 22 70-91 19-40 (114)
275 4f9z_D Endoplasmic reticulum r 96.8 0.0032 1.1E-07 47.3 7.0 89 68-199 133-222 (227)
276 3qmx_A Glutaredoxin A, glutare 96.7 0.0017 5.8E-08 42.4 4.2 26 66-91 14-39 (99)
277 1wik_A Thioredoxin-like protei 96.0 0.012 4E-07 38.9 5.3 26 76-108 28-53 (109)
278 3ctg_A Glutaredoxin-2; reduced 96.0 0.0072 2.5E-07 41.4 4.2 21 70-90 39-60 (129)
279 2klx_A Glutaredoxin; thioredox 96.0 0.0055 1.9E-07 38.7 3.2 23 69-91 7-29 (89)
280 3msz_A Glutaredoxin 1; alpha-b 95.8 0.01 3.6E-07 37.1 4.0 33 69-106 5-37 (89)
281 3kzq_A Putative uncharacterize 95.2 0.087 3E-06 38.7 7.9 38 68-106 3-40 (208)
282 3tdg_A DSBG, putative uncharac 95.0 0.014 4.9E-07 45.1 2.9 39 66-107 147-185 (273)
283 3l4n_A Monothiol glutaredoxin- 94.8 0.021 7.2E-07 39.0 3.1 58 70-136 16-74 (127)
284 3gn3_A Putative protein-disulf 94.6 0.028 9.4E-07 40.8 3.6 44 65-108 13-56 (182)
285 1t1v_A SH3BGRL3, SH3 domain-bi 94.2 0.12 4.2E-06 32.7 5.6 12 70-81 4-15 (93)
286 1z3e_A Regulatory protein SPX; 94.1 0.11 3.9E-06 35.4 5.7 53 70-134 3-55 (132)
287 3gmf_A Protein-disulfide isome 94.0 0.11 3.6E-06 38.4 5.7 49 59-107 8-58 (205)
288 3fz4_A Putative arsenate reduc 93.8 0.16 5.4E-06 34.1 5.8 55 70-136 5-59 (120)
289 3us3_A Calsequestrin-1; calciu 93.8 0.045 1.5E-06 44.1 3.6 42 67-108 248-290 (367)
290 1sji_A Calsequestrin 2, calseq 93.7 0.1 3.5E-06 41.6 5.5 41 67-107 246-287 (350)
291 2ct6_A SH3 domain-binding glut 93.6 0.22 7.6E-06 32.8 6.2 14 69-82 9-22 (111)
292 2axo_A Hypothetical protein AT 93.5 0.42 1.4E-05 36.8 8.4 39 67-108 43-81 (270)
293 3l78_A Regulatory protein SPX; 93.4 0.16 5.3E-06 34.1 5.2 52 70-133 2-53 (120)
294 2l4c_A Endoplasmic reticulum r 93.1 0.37 1.3E-05 32.4 6.8 35 66-105 39-73 (124)
295 2wci_A Glutaredoxin-4; redox-a 92.9 0.051 1.8E-06 37.4 2.2 34 68-108 36-73 (135)
296 1aba_A Glutaredoxin; electron 92.8 0.29 9.8E-06 30.4 5.6 21 70-90 2-26 (87)
297 3q6o_A Sulfhydryl oxidase 1; p 92.7 0.5 1.7E-05 35.3 7.8 37 164-200 202-238 (244)
298 3gkx_A Putative ARSC family re 92.5 0.16 5.4E-06 34.1 4.2 55 70-136 6-60 (120)
299 1rw1_A Conserved hypothetical 92.3 0.13 4.5E-06 34.1 3.6 49 70-130 2-50 (114)
300 3zyw_A Glutaredoxin-3; metal b 92.1 0.13 4.3E-06 34.0 3.3 16 76-91 29-44 (111)
301 3gx8_A Monothiol glutaredoxin- 91.9 0.34 1.2E-05 32.5 5.3 24 68-91 17-44 (121)
302 2kok_A Arsenate reductase; bru 91.7 0.2 6.9E-06 33.5 4.0 50 70-131 7-56 (120)
303 2wem_A Glutaredoxin-related pr 90.0 0.28 9.5E-06 32.8 3.5 16 76-91 33-48 (118)
304 1s3c_A Arsenate reductase; ARS 89.8 0.31 1E-05 33.7 3.6 51 70-132 4-54 (141)
305 3ipz_A Monothiol glutaredoxin- 89.7 0.23 7.8E-06 32.5 2.8 16 76-91 31-46 (109)
306 3rdw_A Putative arsenate reduc 89.6 0.28 9.6E-06 32.9 3.2 50 70-131 7-56 (121)
307 3f0i_A Arsenate reductase; str 87.8 0.28 9.5E-06 32.8 2.2 51 70-132 6-56 (119)
308 1u6t_A SH3 domain-binding glut 87.2 1.7 5.9E-05 29.1 5.8 36 70-108 2-39 (121)
309 2g2q_A Glutaredoxin-2; thiored 85.1 4.1 0.00014 27.0 6.6 39 67-110 2-40 (124)
310 2h8l_A Protein disulfide-isome 83.6 2.6 8.8E-05 31.6 6.1 43 66-108 129-177 (252)
311 1nm3_A Protein HI0572; hybrid, 80.4 1.8 6E-05 32.2 4.1 25 67-91 169-193 (241)
312 3bj5_A Protein disulfide-isome 80.3 7.3 0.00025 26.7 6.9 39 68-107 33-72 (147)
313 2jad_A Yellow fluorescent prot 80.2 0.75 2.6E-05 37.0 2.0 17 70-86 263-279 (362)
314 3t58_A Sulfhydryl oxidase 1; o 77.5 2.3 7.7E-05 35.9 4.2 35 164-198 202-236 (519)
315 2in3_A Hypothetical protein; D 76.1 2.7 9.4E-05 30.4 3.9 36 163-199 172-207 (216)
316 2wul_A Glutaredoxin related pr 73.2 3.1 0.00011 27.7 3.2 15 76-90 33-47 (118)
317 2jvx_A NF-kappa-B essential mo 71.6 0.28 9.6E-06 23.9 -1.7 20 77-96 5-24 (28)
318 2x8g_A Thioredoxin glutathione 69.6 4.7 0.00016 34.3 4.4 56 69-136 19-75 (598)
319 2r2j_A Thioredoxin domain-cont 66.3 6.6 0.00023 31.3 4.4 41 66-107 236-277 (382)
320 4f9z_D Endoplasmic reticulum r 65.5 11 0.00038 27.5 5.2 35 66-105 27-61 (227)
321 2in3_A Hypothetical protein; D 64.1 1.9 6.5E-05 31.3 0.7 38 68-106 8-45 (216)
322 3ec3_A Protein disulfide-isome 63.5 6.1 0.00021 29.5 3.5 41 65-107 131-176 (250)
323 2a2p_A Selenoprotein M, SELM p 61.4 3.5 0.00012 27.9 1.5 30 169-198 57-87 (129)
324 3mjh_B Early endosome antigen 59.9 0.86 3E-05 23.2 -1.3 20 77-96 7-26 (34)
325 3gl5_A Putative DSBA oxidoredu 57.0 19 0.00065 26.7 5.2 41 66-106 1-42 (239)
326 3ktb_A Arsenical resistance op 56.9 37 0.0013 22.0 6.1 37 72-108 10-52 (106)
327 2v2f_A Penicillin binding prot 55.3 7.3 0.00025 18.0 1.7 15 170-184 6-20 (26)
328 3ec3_A Protein disulfide-isome 54.1 63 0.0022 23.8 7.8 36 66-105 25-60 (250)
329 3kgk_A Arsenical resistance op 50.9 49 0.0017 21.6 5.7 34 75-108 10-49 (110)
330 2imf_A HCCA isomerase, 2-hydro 49.5 11 0.00037 27.0 2.7 36 69-105 2-37 (203)
331 2h8l_A Protein disulfide-isome 49.4 50 0.0017 24.3 6.5 36 66-105 24-59 (252)
332 3ghf_A Septum site-determining 47.2 30 0.001 22.8 4.4 54 64-132 45-98 (120)
333 3vhs_A ATPase wrnip1; zinc fin 44.9 1.2 4E-05 20.9 -2.0 11 76-86 7-17 (29)
334 3tlk_A Ferrienterobactin-bindi 44.5 10 0.00035 29.4 2.0 22 6-27 1-22 (326)
335 3qax_A Probable ABC transporte 44.4 7.3 0.00025 28.5 1.1 13 45-57 40-52 (268)
336 1pn0_A Phenol 2-monooxygenase; 43.1 1.6E+02 0.0055 25.3 11.1 35 42-76 481-519 (665)
337 1r4w_A Glutathione S-transfera 42.7 15 0.0005 26.9 2.5 35 68-105 6-40 (226)
338 2a4h_A Selenoprotein SEP15; re 42.5 11 0.00037 25.3 1.5 30 169-198 63-93 (126)
339 3gmf_A Protein-disulfide isome 42.4 6.9 0.00024 28.5 0.6 30 164-199 165-194 (205)
340 1th5_A NIFU1; iron-sulfur clus 39.2 39 0.0013 20.2 3.6 40 55-95 23-63 (74)
341 5nul_A Flavodoxin; electron tr 34.7 29 0.00099 22.8 2.8 9 118-126 96-104 (138)
342 4ev1_A Anabena TIC22; TIC22 fo 34.6 1.1E+02 0.0037 23.1 6.1 58 44-108 12-86 (252)
343 1xhj_A Nitrogen fixation prote 32.9 89 0.003 19.4 5.1 34 55-89 26-59 (88)
344 4gxt_A A conserved functionall 32.3 1.2E+02 0.004 24.3 6.5 43 82-133 220-262 (385)
345 3hug_B Probable conserved memb 31.0 12 0.00041 24.4 0.3 22 76-97 52-73 (108)
346 3cwf_A Alkaline phosphatase sy 29.9 27 0.00093 22.5 2.0 15 170-184 50-64 (122)
347 2bh9_A G6PD, glucose-6-phospha 29.6 98 0.0034 25.8 5.6 56 66-127 4-60 (489)
348 2q1z_B Anti-sigma factor CHRR, 27.5 20 0.00068 25.8 1.0 21 76-96 33-53 (195)
349 3ga8_A HTH-type transcriptiona 26.9 62 0.0021 19.2 3.1 34 63-96 23-63 (78)
350 4dz1_A DALS D-alanine transpor 26.9 24 0.00083 25.7 1.4 14 44-57 37-50 (259)
351 4fn4_A Short chain dehydrogena 25.6 58 0.002 24.4 3.4 22 87-108 43-64 (254)
352 3l7t_A SMU.1112C, putative unc 25.1 1.3E+02 0.0043 18.6 7.4 27 98-133 80-106 (134)
353 3bid_A UPF0339 protein NMB1088 24.6 69 0.0024 18.5 2.8 29 169-197 13-41 (64)
354 2ijr_A Hypothetical protein AP 24.2 66 0.0022 24.7 3.3 37 55-91 208-244 (300)
355 2hdw_A Hypothetical protein PA 24.0 1.6E+02 0.0055 22.2 5.8 57 48-108 70-133 (367)
356 1dpg_A G6PD, glucose 6-phospha 22.5 1.6E+02 0.0054 24.6 5.6 54 67-126 5-59 (485)
357 2p25_A Glyoxalase family prote 22.1 1.4E+02 0.0049 18.2 6.1 26 99-133 73-98 (126)
358 1cfy_A Cofilin; actin-binding, 21.3 1.6E+02 0.0056 19.4 4.8 45 76-126 87-137 (143)
359 3hly_A Flavodoxin-like domain; 21.3 41 0.0014 23.0 1.7 16 116-132 96-111 (161)
360 3vk8_A Probable formamidopyrim 20.5 17 0.00059 28.1 -0.5 10 75-84 279-288 (295)
361 2p08_A Signal transduction his 20.5 57 0.0019 21.2 2.1 16 169-184 12-27 (115)
362 3pgv_A Haloacid dehalogenase-l 20.2 2.6E+02 0.009 20.5 6.7 39 87-134 42-80 (285)
No 1
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=100.00 E-value=3.9e-34 Score=212.75 Aligned_cols=159 Identities=50% Similarity=0.858 Sum_probs=140.3
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|+++|.+|+.+++++++||++||+||++|||+|+.+++.|++++++|++++++|++|++|.+..+++++.+++
T Consensus 23 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~ 102 (183)
T 2obi_A 23 CARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEI 102 (183)
T ss_dssp GCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHH
T ss_pred ccCcccceEEEcCCCCEeeHHHcCCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCCCCCCCCCCHHHH
Confidence 89999999999999999999999999999999999999999999999999999998899999999998777888899999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcC--CcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKG--GFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|++ .++++||++.+.|.++.....+|..+..... +..+..+.++|++||||++|+|++++.|..+++++++.|++
T Consensus 103 ~~~~~-~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 181 (183)
T 2obi_A 103 KEFAA-GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 181 (183)
T ss_dssp HHHHH-TTTCCSEEBCCCCCSSTTSCHHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGG
T ss_pred HHHHH-HcCCCceEEeeeccCCcchhHHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHH
Confidence 99995 4799999985447777766667777654433 44444578889999999999999999999999999999998
Q ss_pred CC
Q 028944 200 PL 201 (201)
Q Consensus 200 ll 201 (201)
+|
T Consensus 182 lL 183 (183)
T 2obi_A 182 YF 183 (183)
T ss_dssp GC
T ss_pred hC
Confidence 76
No 2
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=100.00 E-value=4.6e-34 Score=212.83 Aligned_cols=159 Identities=49% Similarity=0.829 Sum_probs=138.8
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||++|||+|+.++|.|++++++++++|++|++|++|.+..+++++.+++
T Consensus 25 ~g~~~p~f~l~~~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~~~~~~~~~~~~~ 104 (185)
T 2gs3_A 25 CARSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEI 104 (185)
T ss_dssp GCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHH
T ss_pred CCCCcCCceeEcCCCCEeeHHHcCCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcccCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999998899999999997777778899999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcC--CcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKG--GFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|++ +++++||++.+.|.++......|..+..... +..+..+.++|++||||++|+|++++.|..+++++++.|++
T Consensus 105 ~~~~~-~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 183 (185)
T 2gs3_A 105 KEFAA-GYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 183 (185)
T ss_dssp HHHHH-HTTCCSEEBCCCBSSSTTBCHHHHHHTTSGGGCCSSSSSCCSSCCEEEECTTSCEEEEECTTSCGGGGGGGHHH
T ss_pred HHHHH-HcCCCCeeeeeeccCChhhhHHHHHHHhhcccccccCCcccccceEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 99995 5799999995556777776667766654332 33333577889999999999999999999999999999987
Q ss_pred CC
Q 028944 200 PL 201 (201)
Q Consensus 200 ll 201 (201)
+|
T Consensus 184 lL 185 (185)
T 2gs3_A 184 YF 185 (185)
T ss_dssp HC
T ss_pred hC
Confidence 65
No 3
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=100.00 E-value=4.9e-34 Score=208.91 Aligned_cols=158 Identities=50% Similarity=0.870 Sum_probs=138.5
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|..+|+|++.|.+|+.+++++++||++||+||++|||+|+.+++.|+++++++++++++|++|++|.+..+++++.+++
T Consensus 7 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~ 86 (169)
T 2v1m_A 7 SWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEI 86 (169)
T ss_dssp CCCSGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHH
T ss_pred CCcccccceeecCCCCCccHHHcCCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCccCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999998899999999997777788899999
Q ss_pred HHH-HHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 122 QEV-ACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 122 ~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++| .++ ++++||++.+.|.++......|.++.....+..+..+.++|++||||++|++++++.|..+++++.+.|+++
T Consensus 87 ~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 165 (169)
T 2v1m_A 87 KKFVTEK-YGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMEL 165 (169)
T ss_dssp HHHHHHH-HCCCSEEBCCCCCSSTTSCHHHHHHHHHSCCSSSCSCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHH
T ss_pred HHHHHHh-cCCCCceEEEEeecCccccHHHHHHHhhcCCccCCcccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHH
Confidence 999 554 699999985446777776667777766555555445888899999999999999999998888888887765
No 4
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=100.00 E-value=4.5e-34 Score=216.79 Aligned_cols=160 Identities=38% Similarity=0.642 Sum_probs=138.0
Q ss_pred CCCcccceEEecCC-CCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIR-GNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~-G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
.+..+|+|++.|.+ |+.+++++++||++||+||++|||+|+.++|.|++++++|+++|++||+|++|+++.+++++.++
T Consensus 22 ~~~~~p~f~l~~~~~G~~v~l~~~~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d~~~~~e~d~~~~ 101 (208)
T 2f8a_A 22 SMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQFGHQENAKNEE 101 (208)
T ss_dssp CCCCGGGCEECBTTCSSCEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTTTCSCHHH
T ss_pred hcCccCceEeeeCCCCCCccHHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECCcccccCCCCHHH
Confidence 56789999999999 99999999999999999999999999999999999999999889999999999887788889999
Q ss_pred HHHHHH-----hhcCcccceeeeeccCCCCchhhHHHHHhhcCCc-------c------------cccccccceEEEECC
Q 028944 121 IQEVAC-----TMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGF-------L------------GDAIKWNFTKFLVNK 176 (201)
Q Consensus 121 ~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-------~------------~~~i~~~P~~~lid~ 176 (201)
+++|++ .+++++||++.+.|.++......|.++.....+. . ++++.++|++||||+
T Consensus 102 i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~tflID~ 181 (208)
T 2f8a_A 102 ILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGP 181 (208)
T ss_dssp HHHHHHHTSSCTTCCCSSEEBCCCCCSSTTCCHHHHHHHHHSCSCTTCSSCCCSSGGGCCSSSCCTTCCCSTTCEEEECT
T ss_pred HHHHHHhcccccccccceEEEEEeecCCCCccHHHHHHHhcCCCccccchhhccccccccccccccCccccCceEEEEcC
Confidence 999996 2689999999666777777667777765433211 0 124788899999999
Q ss_pred CCcEEEecCCCCCchhhhhcccCCC
Q 028944 177 EGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 177 ~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+|+|++++.|..+++++++.|+++|
T Consensus 182 ~G~i~~~~~g~~~~~~l~~~I~~ll 206 (208)
T 2f8a_A 182 DGVPLRRYSRRFQTIDIEPDIEALL 206 (208)
T ss_dssp TSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHh
Confidence 9999999999999988888887653
No 5
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=100.00 E-value=9.7e-34 Score=207.49 Aligned_cols=160 Identities=64% Similarity=1.112 Sum_probs=135.5
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|..+|+|++.|.+|+.+++++++||++||+||++||++|+.++|.|+++++++++++++|++|++|.+..+++++.+.+
T Consensus 8 ~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 87 (170)
T 2p5q_A 8 NPESVHDFTVKDAKENDVDLSIFKGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQI 87 (170)
T ss_dssp --CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHH
T ss_pred CCccccceEEEcCCCCEecHHHhCCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999998899999999998777788899999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
++|++++++++||++.+.|.++......|..+....++..+.++.+.|++||||++|++++++.|..+++++++.|+++|
T Consensus 88 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 88 TDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLL 167 (170)
T ss_dssp HHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHT
T ss_pred HHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHh
Confidence 99996467999999855567777766777766543333322355555599999999999999999988888888887654
No 6
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=215.29 Aligned_cols=159 Identities=40% Similarity=0.641 Sum_probs=136.5
Q ss_pred CCCcccceEEecCC-CCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIR-GNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~-G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
....+|+|++.|.+ |+.+++++++||++||+||++|||+|+ ++|.|++++++|+++|++||+|+.|+++.+++++.++
T Consensus 31 ~~~~~pdF~l~d~~~G~~v~Lsd~~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~f~~~e~~~~~~ 109 (215)
T 2i3y_A 31 EKGTIYDYEAIALNKNEYVSFKQYVGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQFGKQEPGDNKE 109 (215)
T ss_dssp CCCCGGGCEEEBSSSSCEEEGGGGTTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHH
T ss_pred ccCCcCCcEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccccCcCCCCCHHH
Confidence 56789999999999 999999999999999999999999999 9999999999999999999999999988888899999
Q ss_pred HHHHHH-----hhcCcccceeeeeccCCCCchhhHHHHHhhcCC---cc------------cccccccceEEEECCCCcE
Q 028944 121 IQEVAC-----TMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGG---FL------------GDAIKWNFTKFLVNKEGKV 180 (201)
Q Consensus 121 ~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~i~~~P~~~lid~~G~i 180 (201)
+++|++ .+++++||++.|.|.++.....+|.++.....+ .. +..|.++|++||||++|+|
T Consensus 110 i~~f~~~~~~~~~~~~~fpll~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~npttfLID~~G~v 189 (215)
T 2i3y_A 110 ILPGLKYVRPGGGFVPSFQLFEKGDVNGEKEQKVFSFLKHSCPHPSEILGTFKSISWDPVKVHDIRWNFEKFLVGPDGIP 189 (215)
T ss_dssp HHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCTTTCCSSSCCTTCCCSTTCEEEECTTSCE
T ss_pred HHHHHHhccchhccCccceeEeeeccCCcccchHHHHHHhhCcccccccccccccccccccccccccCceEEEECCCCeE
Confidence 999995 157999999966667777777778776543221 11 1246778999999999999
Q ss_pred EEecCCCCCchhhhhcccCCC
Q 028944 181 VERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 181 ~~~~~g~~~~~~l~~~l~~ll 201 (201)
++++.|..+++++++.|+++|
T Consensus 190 v~~~~g~~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 190 VMRWSHRATVSSVKTDILAYL 210 (215)
T ss_dssp EEEECTTSCHHHHHHHHHHHG
T ss_pred EEEeCCCCCHHHHHHHHHHHH
Confidence 999999888888888877654
No 7
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=100.00 E-value=1.9e-34 Score=215.32 Aligned_cols=158 Identities=51% Similarity=0.811 Sum_probs=140.6
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.+.++|+|++.|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++|++||+|++|+++.+++++.+++
T Consensus 22 ~~~~~p~f~l~d~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~e~~~~~~~ 101 (187)
T 3dwv_A 22 AASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQFGGQEPGNEEEI 101 (187)
T ss_dssp TCCSGGGSCCBBTTSCBCCGGGGTTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCCCSSCSSSBTTHH
T ss_pred CCCccCCeEEEcCCCCEeeHHHhCCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcccCCCCCCCHHHH
Confidence 67899999999999999999999999999999999999999999999999999999899999999998888888999999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccc---eEEEECCCCcEEEecCCCCCchhhhhccc
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNF---TKFLVNKEGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P---~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
++|++++|+++||++.+.|.++.....+|..+....++.. ++..+| ++||||++|+|++++.|..+++++.+.|+
T Consensus 102 ~~~~~~~~~~~~p~~~~~d~~~~~~~~~~~~l~~~~~~~~--~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~ 179 (187)
T 3dwv_A 102 KEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGIL--ATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLI 179 (187)
T ss_dssp HHSCCBCCCCSSCBBCCBCCSCC-CCHHHHHHHHHSCCSB--SSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhccCCCCceeeccccCCcchhHHHHHHHhhcCCcc--CCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHH
Confidence 9999767899999996668888888888888877665554 444556 99999999999999999999998888887
Q ss_pred CCC
Q 028944 199 IPL 201 (201)
Q Consensus 199 ~ll 201 (201)
++|
T Consensus 180 ~lL 182 (187)
T 3dwv_A 180 PLL 182 (187)
T ss_dssp HHC
T ss_pred HHH
Confidence 654
No 8
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=100.00 E-value=3.3e-33 Score=211.74 Aligned_cols=158 Identities=37% Similarity=0.603 Sum_probs=133.9
Q ss_pred CCCcccceEEecCC-CCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIR-GNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~-G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
....+|+|++.|.+ |+.+++++++||++||+||++|||+| .++|.|++++++|+++|++||+|+.|++..+++++.++
T Consensus 13 ~~~~~pdF~l~d~~~G~~v~Ls~~kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~f~~~e~~~~~~ 91 (207)
T 2r37_A 13 ISGTIYEYGALTIDGEEYIPFKQYAGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQFGKQEPGENSE 91 (207)
T ss_dssp --CCGGGCEEEBTTSSCEEEGGGGTTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCCBTTCCCSCHHH
T ss_pred ccCccCCeEeeeCCCCCEEcHHHhCCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcccCcCCCCCHHH
Confidence 45689999999999 99999999999999999999999999 79999999999999999999999999888888889999
Q ss_pred HHHHHH-----hhcCcccceeeeeccCCCCchhhHHHHHhhcCC---cc------------cccccccceEEEECCCCcE
Q 028944 121 IQEVAC-----TMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGG---FL------------GDAIKWNFTKFLVNKEGKV 180 (201)
Q Consensus 121 ~~~~~~-----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~------------~~~i~~~P~~~lid~~G~i 180 (201)
+++|++ .+++++||++.|.|.++.....+|.++.....+ .. ++.+.|.|++||||++|+|
T Consensus 92 i~~f~~~~~~~~~~~~~fp~l~d~d~~g~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~p~~~~~i~~~~ttflID~~G~i 171 (207)
T 2r37_A 92 ILPTLKYVRPGGGFVPNFQLFEKGDVNGEKEQKFYTFLKNSCPPTSELLGTSDRLFWEPMKVHDIRWNFEKFLVGPDGIP 171 (207)
T ss_dssp HHHHHHHTSSCTTCCCSSEEBCCCCSSSTTCCHHHHHHHHHSCCSCSCCCCGGGBCCSSCCTTCCCSTTCEEEECTTSCE
T ss_pred HHHHHHhcchhhccCccceeeeEeccCCcccchHHHHHHhhCccccccccccccccccccccCcccccceEEEECCCCcE
Confidence 999996 157999999966666777766778776543221 11 1246788999999999999
Q ss_pred EEecCCCCCchhhhhcccCC
Q 028944 181 VERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 181 ~~~~~g~~~~~~l~~~l~~l 200 (201)
++++.|..+++++++.|+++
T Consensus 172 ~~~~~g~~~~~~l~~~I~~l 191 (207)
T 2r37_A 172 IMRWHHRTTVSNVKMDILSY 191 (207)
T ss_dssp EEEECTTSCHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHH
Confidence 99999988888888887765
No 9
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=100.00 E-value=4.4e-33 Score=206.64 Aligned_cols=151 Identities=42% Similarity=0.681 Sum_probs=131.0
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|..+|+|++.|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++|++|++|++|.+...++++.+++
T Consensus 14 ~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~ 93 (180)
T 3kij_A 14 KINSFYAFEVKDAKGRTVSLEKYKGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEV 93 (180)
T ss_dssp CCCCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHH
T ss_pred CcCcccceEEecCCCCEecHHHcCCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999998888888999999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccce----EEEECCCCcEEEecCCCCCchhhhhcc
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFT----KFLVNKEGKVVERYAPTTSPLKIEVGT 197 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~----~~lid~~G~i~~~~~g~~~~~~l~~~l 197 (201)
++|++++++++||++.+.|..+......|.++.... ...|+ +||||++|+|++++.|..+++++.+.|
T Consensus 94 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~--------~~~p~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i 165 (180)
T 3kij_A 94 ESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSS--------KKEPRWNFWKYLVNPEGQVVKFWRPEEPIEVIRPDI 165 (180)
T ss_dssp HHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHH--------TCCCSSTTCEEEECTTSCEEEEECTTCCGGGTHHHH
T ss_pred HHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcC--------CCCccccceEEEECCCCCEEEEECCCCCHHHHHHHH
Confidence 999965379999998655666666666666654421 22366 999999999999999999888877776
Q ss_pred cCC
Q 028944 198 TIP 200 (201)
Q Consensus 198 ~~l 200 (201)
+++
T Consensus 166 ~~l 168 (180)
T 3kij_A 166 AAL 168 (180)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 10
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.8e-33 Score=205.50 Aligned_cols=149 Identities=44% Similarity=0.729 Sum_probs=129.3
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+++|+|++.|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|++++++|++|++|.++.+++++.+++
T Consensus 25 ~g~~~p~f~l~~~~G~~~~l~~~~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~ 104 (181)
T 2p31_A 25 QEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEI 104 (181)
T ss_dssp --CCGGGCEEEBTTSCEEEGGGGTTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHH
T ss_pred cCCccCceEeecCCCCEecHHHcCCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHH
Confidence 78999999999999999999999999999999999999999999999999999998899999999998777788899999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccc-------eEEEECCCCcEEEecCCCCCchhhh
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNF-------TKFLVNKEGKVVERYAPTTSPLKIE 194 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P-------~~~lid~~G~i~~~~~g~~~~~~l~ 194 (201)
++|++++++++||++.+.|.++......|.+. +..+| ++||||++|+|++++.|..++++++
T Consensus 105 ~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~-----------~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 173 (181)
T 2p31_A 105 ESFARRTYSVSFPMFSKIAVTGTGAHPAFKYL-----------AQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVR 173 (181)
T ss_dssp HHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHH-----------HHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHH
T ss_pred HHHHHhhcCCCceeEeecccCCccchhhhhhh-----------hhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHH
Confidence 99996536999999955566666655555432 22336 8999999999999999998999999
Q ss_pred hcccCCC
Q 028944 195 VGTTIPL 201 (201)
Q Consensus 195 ~~l~~ll 201 (201)
+.|+++|
T Consensus 174 ~~i~~ll 180 (181)
T 2p31_A 174 PQITALV 180 (181)
T ss_dssp HHHHTTC
T ss_pred HHHHHHh
Confidence 9998876
No 11
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=8.5e-33 Score=206.82 Aligned_cols=162 Identities=51% Similarity=0.858 Sum_probs=136.1
Q ss_pred ccccCCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 38 ATQEAPKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 38 ~~~~~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
+....++.+|+|++.|.+|+.+++++++||++||+||++|||+|+.+++.|+++++++++++++|++|++|+++.+++++
T Consensus 20 s~~~~~~~~p~f~l~~~~G~~~~l~~~~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~ 99 (190)
T 2vup_A 20 SHMSAASSIFDFEVLDADHKPYNLVQHKGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQFGGQEPGN 99 (190)
T ss_dssp ----CCCSGGGSCCBBTTSSBCCGGGGTTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSC
T ss_pred ccCCCCCcccCeEEEcCCCCEEEHHHcCCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCC
Confidence 33347889999999999999999999999999999999999999999999999999999889999999999888888889
Q ss_pred HHHHHHHH-HhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccc-cccccceEEEECCCCcEEEecCCCCCchhhhh
Q 028944 118 NEEIQEVA-CTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGD-AIKWNFTKFLVNKEGKVVERYAPTTSPLKIEV 195 (201)
Q Consensus 118 ~~~~~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 195 (201)
.+++++|+ ++ ++++||++.+.|.++.....+|..+....++..+. .+.++|++||||++|++++++.|..+++++.+
T Consensus 100 ~~~~~~~~~~~-~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~ 178 (190)
T 2vup_A 100 EEEIKEFVCTK-FKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEK 178 (190)
T ss_dssp HHHHHHHHHHH-HCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHH
T ss_pred HHHHHHHHHHh-cCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHH
Confidence 99999999 55 69999999655777777767787766554443332 24444599999999999999999988888888
Q ss_pred cccCC
Q 028944 196 GTTIP 200 (201)
Q Consensus 196 ~l~~l 200 (201)
.|+++
T Consensus 179 ~i~~l 183 (190)
T 2vup_A 179 KLIPL 183 (190)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 12
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.6e-32 Score=200.00 Aligned_cols=152 Identities=46% Similarity=0.805 Sum_probs=116.1
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.+..+|+|+++|.+|+.+++++++||++||+||++||++|+ ++|.|++++++++++++.|++|++|+++.+++++.+++
T Consensus 8 ~~~~~~~f~l~d~~G~~~~l~~~~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~d~~~~~ 86 (171)
T 3cmi_A 8 HMSEFYKLAPVDKKGQPFPFDQLKGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCNQFGHQEPGSDEEI 86 (171)
T ss_dssp --CGGGGCCCBBTTSCBCCGGGGTTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEECSCC----------
T ss_pred chhheeeeEEEcCCCCEecHHHcCCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECcccCCCCCCCHHHH
Confidence 45678999999999999999999999999999999999999 99999999999998899999999987777777899999
Q ss_pred HHHH-HhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccc------eEEEECCCCcEEEecCCCCCchhhh
Q 028944 122 QEVA-CTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNF------TKFLVNKEGKVVERYAPTTSPLKIE 194 (201)
Q Consensus 122 ~~~~-~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P------~~~lid~~G~i~~~~~g~~~~~~l~ 194 (201)
++|+ ++ ++++||++.|.|.++......|..+....+ ++..+| ++||||++|++++++.|..++++++
T Consensus 87 ~~~~~~~-~~~~~p~~~d~d~~~~~~~~~~~~~~~~~~-----~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~ 160 (171)
T 3cmi_A 87 AQFCQLN-YGVTFPIMKKIDVNGGNEDPVYKFLKSQKS-----GMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLS 160 (171)
T ss_dssp ---------CCCSCBBCCCBSSSTTBCHHHHHHHHHSC-----CSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGH
T ss_pred HHHHHhc-cCCCceEEeeccCCCccchHHHHHHHhccC-----CcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHH
Confidence 9999 55 699999996556667666677776654433 445557 9999999999999999988888888
Q ss_pred hcccCC
Q 028944 195 VGTTIP 200 (201)
Q Consensus 195 ~~l~~l 200 (201)
+.|+++
T Consensus 161 ~~i~~l 166 (171)
T 3cmi_A 161 ETIEEL 166 (171)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 13
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=99.97 E-value=4.8e-31 Score=194.13 Aligned_cols=152 Identities=15% Similarity=0.220 Sum_probs=120.1
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCC-cHHhHHHHHHHHHHhcCC--CeEEEEeecCCCCCCCCCCH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGL-TQSNYKELNVLYEKYKNQ--DFEVLAFPCNQFAGQEPGSN 118 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~~--~~~vv~vs~d~~~~~~~~~~ 118 (201)
.+.++|+|+|+|.+|+.+++++++||++||+||+||||. |+.+++.|.++++.++++ ++++|+||+| |++|++
T Consensus 8 ~~~~~PdF~L~d~~G~~v~l~d~~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvD----p~~Dtp 83 (170)
T 4hde_A 8 LNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVD----PDLDKP 83 (170)
T ss_dssp CCBCCCCCEEECTTSCEEEHHHHTTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESC----TTTCCH
T ss_pred CCCcCCCcEEECCCCCEEeHHHhCCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecC----cccccH
Confidence 688999999999999999999999999999999999985 999999999999998754 5999999999 888999
Q ss_pred HHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhc----CCcccccccccceEEEECCCCcEEEecCCCC--Cchh
Q 028944 119 EEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEK----GGFLGDAIKWNFTKFLVNKEGKVVERYAPTT--SPLK 192 (201)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~----~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~--~~~~ 192 (201)
+.+++|+ ++|+.+++.| ....+.............. .....+.+.|.|++||||++|+|++.|.|.. +.++
T Consensus 84 ~~l~~y~-~~~~~~~~~~--~~ltg~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~liD~~G~i~~~~~g~~~~~~~~ 160 (170)
T 4hde_A 84 ENLKAFI-QKFTEDTSNW--NLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYED 160 (170)
T ss_dssp HHHHHHH-TTTCSCCTTE--EEEBCSCHHHHHHHHHHHHCCCCBCCTTSCCBCCCEEEEECTTSCEEEEEESSSSCCHHH
T ss_pred HHHHHHH-HHcCCCCCCc--eecCcccHHHHHHHHHhcccccccCCCCceEEeeeEEEEEcCCCeEEEEECCCCCCCHHH
Confidence 9999999 5578887766 2234433333333222211 1112357889999999999999999987754 4466
Q ss_pred hhhcccCC
Q 028944 193 IEVGTTIP 200 (201)
Q Consensus 193 l~~~l~~l 200 (201)
+.+.|++|
T Consensus 161 l~~~ik~L 168 (170)
T 4hde_A 161 IIRDMKRL 168 (170)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777665
No 14
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.97 E-value=2.1e-30 Score=187.68 Aligned_cols=145 Identities=14% Similarity=0.224 Sum_probs=120.6
Q ss_pred CCCcccceEEec--CCCCeeecCCCCCcEEEEEEeecCCCCcHHh-HHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCH
Q 028944 42 APKSIYDFTVKD--IRGNDVSLSGYRGKVLLVVNVASKCGLTQSN-YKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSN 118 (201)
Q Consensus 42 ~~~~~p~f~l~~--~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 118 (201)
.|..+|+|++.+ .+|+.+++++++||++||+||++||++|+.+ +|.|++++++|+++++.+++|++| +...+.++.
T Consensus 2 ~g~~aP~f~l~~~~~~g~~~~l~~~~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~ 80 (158)
T 3eyt_A 2 NAMKAPELQIQQWFNSATDLTLADLRGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTV-FEHHEAMTP 80 (158)
T ss_dssp CCEECCCCCEEEEESCSSCCCTGGGTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCH
T ss_pred CCCcCCCceehhhhcCCCccCHHHhCCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEec-ccccccCCH
Confidence 578999999999 4889999999999999999999999999997 999999999999889999999987 333335799
Q ss_pred HHHHHHHHhhcCcccceeeeeccCCCCc-hhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcc
Q 028944 119 EEIQEVACTMFKAEFPIFDKIDVNGKNA-APIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGT 197 (201)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 197 (201)
+.+++|+++ ++++||++ .|..+... ..+... +++.++|++||||++|++++++.|..+.+++.+.|
T Consensus 81 ~~~~~~~~~-~~~~~~~~--~d~~~~~~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 147 (158)
T 3eyt_A 81 ISLKAFLHE-YRIKFPVG--VDQPGDGAMPRTMAA----------YQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEI 147 (158)
T ss_dssp HHHHHHHHH-TTCCSCEE--EECCCSSSSCHHHHH----------TTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHHH-cCCCceEE--EcCccchhhHHHHHH----------cCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHH
Confidence 999999955 69999988 45544211 112211 36778899999999999999999999888888877
Q ss_pred cCC
Q 028944 198 TIP 200 (201)
Q Consensus 198 ~~l 200 (201)
+++
T Consensus 148 ~~l 150 (158)
T 3eyt_A 148 ATL 150 (158)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 15
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.96 E-value=2e-30 Score=188.03 Aligned_cols=145 Identities=12% Similarity=0.198 Sum_probs=122.0
Q ss_pred CCCcccceEEec-CCCCeeecCCCCCcEEEEEEeecCCCCcHHh-HHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDFTVKD-IRGNDVSLSGYRGKVLLVVNVASKCGLTQSN-YKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f~l~~-~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.|.++|+|++.+ .+|+.+++++++||++||+||++||++|+.+ +|.|++++++|+++++.+++|++| +...+.++.+
T Consensus 5 ~g~~~p~~~~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~-~~~~~~~~~~ 83 (160)
T 3lor_A 5 DNAPLLELDVQEWVNHEGLSNEDLRGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV-FEHHDVMTPE 83 (160)
T ss_dssp TTCCBCCCCEEEESSSCCCCHHHHTTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC-CSCGGGSCHH
T ss_pred CCCcCCCcccccccCCCccCHHHhCCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc-ccccccCCHH
Confidence 688999999999 8999999999999999999999999999996 999999999999889999999987 3333457999
Q ss_pred HHHHHHHhhcCcccceeeeeccCCC--CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcc
Q 028944 120 EIQEVACTMFKAEFPIFDKIDVNGK--NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGT 197 (201)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 197 (201)
.+++|+++ ++++||++ .|..+. ....+... +++.++|++||||++|++++++.|..+.+++++.|
T Consensus 84 ~~~~~~~~-~~~~~~~~--~d~~~~~~~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i 150 (160)
T 3lor_A 84 ALKVFIDE-FGIKFPVA--VDMPREGQRIPSTMKK----------YRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLL 150 (160)
T ss_dssp HHHHHHHH-TTCCSCEE--EECCCTTCSSCHHHHH----------TTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHH
T ss_pred HHHHHHHH-cCCCCcEE--ECCccccchhhhHHHh----------cccCccceEEEECCCCcEEEEecCcCCHHHHHHHH
Confidence 99999955 69999988 444443 11112221 36777899999999999999999999888888877
Q ss_pred cCC
Q 028944 198 TIP 200 (201)
Q Consensus 198 ~~l 200 (201)
+++
T Consensus 151 ~~l 153 (160)
T 3lor_A 151 GSL 153 (160)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 16
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=99.96 E-value=1.8e-30 Score=188.63 Aligned_cols=145 Identities=19% Similarity=0.172 Sum_probs=108.4
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
+|+++|+|+|.|.+|+.+++++++||++||+|| ++|||+|+.+++.|++++++++++++++++||.| +++.
T Consensus 6 vG~~aPdF~l~~~~G~~~~l~d~~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d--------~~~~ 77 (157)
T 4g2e_A 6 IGELAPDFELPDTELKKVKLSALKGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVD--------PPFS 77 (157)
T ss_dssp TTSBCCCCEEEBTTSCEEEGGGGTTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESS--------CHHH
T ss_pred CCCCCcCeEeECCCCCEEeHHHHCCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeeccc--------chhH
Confidence 899999999999999999999999999999999 8999999999999999999999999999999976 7899
Q ss_pred HHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCC-----CCchhhhh
Q 028944 121 IQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPT-----TSPLKIEV 195 (201)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~-----~~~~~l~~ 195 (201)
+++|+++ ++++||++ .|.++...+ .|+.... ..+. .+.....|++||||++|+|++.+.+. .+.+++.+
T Consensus 78 ~~~~~~~-~~~~~p~l--~D~~~~v~~-~ygv~~~-~~~~-~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~ 151 (157)
T 4g2e_A 78 NKAFKEH-NKLNFTIL--SDYNREVVK-KYNVAWE-FPAL-PGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEK 151 (157)
T ss_dssp HHHHHHH-TTCCSEEE--ECTTSHHHH-HTTCEEE-CTTS-TTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHH
T ss_pred HHHHHHH-cCCcEEEE--EcCCcHHHH-HcCCccc-cccC-CCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHH
Confidence 9999955 69999999 566554332 2321110 0011 11233568999999999999886443 34466777
Q ss_pred cccCC
Q 028944 196 GTTIP 200 (201)
Q Consensus 196 ~l~~l 200 (201)
.|++|
T Consensus 152 ~l~~L 156 (157)
T 4g2e_A 152 VVKSL 156 (157)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 77654
No 17
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.96 E-value=2.9e-29 Score=178.54 Aligned_cols=134 Identities=17% Similarity=0.159 Sum_probs=113.8
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHH---HHHHhcCCCeEEEEeecCCCCCCCCCCH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNV---LYEKYKNQDFEVLAFPCNQFAGQEPGSN 118 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~---~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 118 (201)
+|+.+|+|++.+.+|+.+++++++||++||+||++|||+|+.++|.|.+ ++++++++++.+++|++| ++.
T Consensus 3 ~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d-------~~~ 75 (142)
T 3ewl_A 3 AGMKAADFTYVTVHGDNSRMSRLKAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPD-------ENR 75 (142)
T ss_dssp TTSBCCCCEEECTTCCEEEGGGCCCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECS-------SCH
T ss_pred CCCcCCCCEEECCCCCEEEhhhcCCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEec-------CCH
Confidence 7999999999999999999999999999999999999999999999998 999998889999999987 478
Q ss_pred HHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhccc
Q 028944 119 EEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
+.+++|++ +++++||++ .|..+.... .. .+++.++|++||||++|++++. ..+.+++++.|+
T Consensus 76 ~~~~~~~~-~~~~~~~~~--~d~~~~~~~-------~~-----~~~v~~~P~~~lid~~G~i~~~---~~~~~~l~~~l~ 137 (142)
T 3ewl_A 76 EEWATKAV-YMPQGWIVG--WNKAGDIRT-------RQ-----LYDIRATPTIYLLDGRKRVILK---DTSMEQLIDYLA 137 (142)
T ss_dssp HHHHHHHT-TSCTTCEEE--ECTTCHHHH-------TT-----CSCCCSSSEEEEECTTCBEEEC---SCCHHHHHHHHH
T ss_pred HHHHHHHH-HcCCCccee--eCCccchhh-------HH-----HcCCCCCCeEEEECCCCCEEec---CCCHHHHHHHHH
Confidence 99999994 579999998 555443221 00 1378888999999999999873 466788888887
Q ss_pred CC
Q 028944 199 IP 200 (201)
Q Consensus 199 ~l 200 (201)
++
T Consensus 138 ~~ 139 (142)
T 3ewl_A 138 TQ 139 (142)
T ss_dssp C-
T ss_pred HH
Confidence 64
No 18
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=8.7e-29 Score=177.90 Aligned_cols=135 Identities=19% Similarity=0.230 Sum_probs=113.2
Q ss_pred CCCcccceEEecCCCCeeecC--CCCCcEEEEEEeecCCCC--cHHhHHHHHHHHHHh-cCCCeEEEEeecCCCCCCCCC
Q 028944 42 APKSIYDFTVKDIRGNDVSLS--GYRGKVLLVVNVASKCGL--TQSNYKELNVLYEKY-KNQDFEVLAFPCNQFAGQEPG 116 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~--~~~gk~~lv~f~~~~C~~--C~~~~~~l~~~~~~~-~~~~~~vv~vs~d~~~~~~~~ 116 (201)
.|+++|+|++.|.+|+.++++ +++||++||+||++||++ |+.++|.|++++++| +++++.+++|++| +
T Consensus 7 ~G~~~p~f~l~~~~g~~~~l~~~~~~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d-------~ 79 (150)
T 3fw2_A 7 IGKYAPFFSLPNAKGEKITRSSDAFKQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLD-------V 79 (150)
T ss_dssp TTSBCCCCCEEBTTCCEECTTSTTTTTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECC-------S
T ss_pred CCCcCCccEeECCCCCEEecchhhhCCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcC-------C
Confidence 899999999999999999999 999999999999999999 999999999999999 8889999999998 3
Q ss_pred CHHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhc
Q 028944 117 SNEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVG 196 (201)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 196 (201)
+++.+++|+++ ++.+|+++ .|..+.. ..+... +++.++|++||||++|++++++. +.+++++.
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~--~d~~~~~-~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~ 142 (150)
T 3fw2_A 80 DKQQWKDAIKR-DTLDWEQV--CDFGGLN-SEVAKQ----------YSIYKIPANILLSSDGKILAKNL---RGEELKKK 142 (150)
T ss_dssp CHHHHHHHHHH-TTCCSEEE--CCSCGGG-CHHHHH----------TTCCSSSEEEEECTTSBEEEESC---CHHHHHHH
T ss_pred CHHHHHHHHHH-hCCCceEE--EcCcccc-hHHHHH----------cCCCccCeEEEECCCCEEEEccC---CHHHHHHH
Confidence 67999999955 69999998 4432211 112111 36778899999999999999975 56677776
Q ss_pred ccCC
Q 028944 197 TTIP 200 (201)
Q Consensus 197 l~~l 200 (201)
|+++
T Consensus 143 l~~l 146 (150)
T 3fw2_A 143 IENI 146 (150)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 19
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.96 E-value=1.6e-28 Score=174.90 Aligned_cols=133 Identities=15% Similarity=0.052 Sum_probs=111.6
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHH---HHHHhcCCCeEEEEeecCCCCCCCCCCH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNV---LYEKYKNQDFEVLAFPCNQFAGQEPGSN 118 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~---~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 118 (201)
.|..+|+|++.+.+|+.+++++++||++||+||++||++|+.++|.|++ ++++++++++.|++|+.| ++.
T Consensus 7 ~G~~ap~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d-------~~~ 79 (142)
T 3eur_A 7 LGTKALNFTYTLDSGVKGTLYQFPAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPD-------EEL 79 (142)
T ss_dssp TTSBCCCCEEEETTSCEEETTTCCCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECS-------SCH
T ss_pred CCCccCCcEEEcCCCCEeeHHHcCCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcC-------CCH
Confidence 8999999999999999999999999999999999999999999999999 999999889999999987 477
Q ss_pred HHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhccc
Q 028944 119 EEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
+.+++++++ ++.+|+.. .|..+.. .+. ..+++.++|++||||++|+|+++..+ .+++++.|+
T Consensus 80 ~~~~~~~~~-~~~~~~~~--~d~~~~~--~~~----------~~~~v~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~ 141 (142)
T 3eur_A 80 DEWKKHRND-FAKEWTNG--YDKELVI--KNK----------NLYDLRAIPTLYLLDKNKTVLLKDAT---LQKVEQYLA 141 (142)
T ss_dssp HHHHHHGGG-SCTTSEEE--ECTTCHH--HHT----------TCSCCTTCSEEEEECTTCBEEEEEEC---HHHHHHHHH
T ss_pred HHHHHHHHh-cccccccc--cCccchh--hhh----------hhcCCCcCCeEEEECCCCcEEecCCC---HHHHHHHHh
Confidence 899999954 68888887 4443320 000 01377888999999999999988654 567777665
Q ss_pred C
Q 028944 199 I 199 (201)
Q Consensus 199 ~ 199 (201)
+
T Consensus 142 e 142 (142)
T 3eur_A 142 E 142 (142)
T ss_dssp C
T ss_pred C
Confidence 3
No 20
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.96 E-value=5.5e-29 Score=177.57 Aligned_cols=134 Identities=16% Similarity=0.160 Sum_probs=106.4
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++ +.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.|++|++| .+.+++
T Consensus 9 ~G~~~P~f~l-~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d-------~~~~~~ 80 (143)
T 4fo5_A 9 PGDLAPRIEF-LGNDAKASFHNQLGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMD-------EKESIF 80 (143)
T ss_dssp TTSBCCCCCC------CCCSCCSSCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECC-------SCHHHH
T ss_pred CcccCCceEE-cCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEcc-------CCHHHH
Confidence 8999999999 99999999999999999999999999999999999999999999889999999998 368899
Q ss_pred HHHHHhhcCccc-ceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 122 QEVACTMFKAEF-PIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 122 ~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++++++ ++++| +.+ .|..+.. ..+... +++.++|++||||++|+|+++.. ..+++++.|+++
T Consensus 81 ~~~~~~-~~~~~~~~~--~d~~~~~-~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~i 143 (143)
T 4fo5_A 81 TETVKI-DKLDLSTQF--HEGLGKE-SELYKK----------YDLRKGFKNFLINDEGVIIAANV---TPEKLTEILKAI 143 (143)
T ss_dssp HHHHHH-HTCCGGGEE--ECTTGGG-SHHHHH----------TTGGGCCCEEEECTTSBEEEESC---CHHHHHHHHTC-
T ss_pred HHHHHH-hCCCCceee--ecccccc-hHHHHH----------cCCCCCCcEEEECCCCEEEEccC---CHHHHHHHHHhC
Confidence 999965 69999 666 3433221 111111 37778899999999999998865 367787777653
No 21
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=99.96 E-value=3.7e-29 Score=183.79 Aligned_cols=152 Identities=16% Similarity=0.266 Sum_probs=118.4
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCC-CcHHhHHHHHHHHHHhcCCC--eEEEEeecCCCCCCCCCCH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCG-LTQSNYKELNVLYEKYKNQD--FEVLAFPCNQFAGQEPGSN 118 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~-~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d~~~~~~~~~~ 118 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||++||+ +|+.+++.|.++++++++++ ++||+|++| ++++++
T Consensus 9 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d----~~~d~~ 84 (174)
T 1xzo_A 9 LNYEVEPFTFQNQDGKNVSLESLKGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD----PENDKP 84 (174)
T ss_dssp CCEECCCCEEECTTSCEEETGGGTTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC----TTTCCH
T ss_pred cccccCCcEEEcCCCCEEehhhcCCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC----CCCCCH
Confidence 79999999999999999999999999999999999999 89999999999999998776 999999998 455789
Q ss_pred HHHHHHHHhhcCccc---ceeeeeccCCCCchhhHHHHHhh--c-CCcccccccccceEEEECCCCcEEEecCCCC--Cc
Q 028944 119 EEIQEVACTMFKAEF---PIFDKIDVNGKNAAPIYKFLKSE--K-GGFLGDAIKWNFTKFLVNKEGKVVERYAPTT--SP 190 (201)
Q Consensus 119 ~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~--~-~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~--~~ 190 (201)
+.+++|++ +++++| +++ .|.++..... |....-. . ....++++.+.|++||||++|+|++++.|.. +.
T Consensus 85 ~~~~~~~~-~~~~~~~~~~~l--~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~ 160 (174)
T 1xzo_A 85 KQLKKFAA-NYPLSFDNWDFL--TGYSQSEIEE-FALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPY 160 (174)
T ss_dssp HHHHHHHT-TSCCCGGGEEEE--BCSCHHHHHH-HHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCH
T ss_pred HHHHHHHH-HcCCCCcceEEE--eCCCHHHHHH-HHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCH
Confidence 99999995 579999 555 3322222222 2110000 0 0001136778899999999999999998876 46
Q ss_pred hhhhhcccCCC
Q 028944 191 LKIEVGTTIPL 201 (201)
Q Consensus 191 ~~l~~~l~~ll 201 (201)
+++.+.|+++|
T Consensus 161 ~~l~~~l~~ll 171 (174)
T 1xzo_A 161 DDIISDVKSAS 171 (174)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 77888777654
No 22
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.96 E-value=5.2e-29 Score=179.07 Aligned_cols=136 Identities=21% Similarity=0.316 Sum_probs=118.2
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||++||++|+.+++.|.+++++++++++.++.|+.| ++.+.+
T Consensus 2 ~G~~~p~~~l~~~~g~~~~l~~~~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d-------~~~~~~ 74 (151)
T 2f9s_A 2 EGSDAPNFVLEDTNGKRIELSDLKGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVG-------ESKIAV 74 (151)
T ss_dssp CCEECCCCEEECTTCCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEES-------CCHHHH
T ss_pred CCCcCCcceeEcCCCCEEEHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECC-------CCHHHH
Confidence 6889999999999999999999999999999999999999999999999999999888999999987 367999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
++|+++ ++++|+++ .|.+.... .. +++.++|+++|+|++|+++.++.|..+.+++.+.|++++
T Consensus 75 ~~~~~~-~~~~~~~~--~d~~~~~~-~~-------------~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 75 HNFMKS-YGVNFPVV--LDTDRQVL-DA-------------YDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIK 137 (151)
T ss_dssp HHHHHH-HTCCSCEE--EETTSHHH-HH-------------TTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHHHHH-cCCCceEE--ECCchHHH-Hh-------------cCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 999965 69999998 44433222 11 367788999999999999999999988888888877653
No 23
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.96 E-value=7.2e-29 Score=184.04 Aligned_cols=140 Identities=14% Similarity=0.183 Sum_probs=120.3
Q ss_pred cCCCcccceEEecC--CCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCe------EEEEeecCCCCC
Q 028944 41 EAPKSIYDFTVKDI--RGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDF------EVLAFPCNQFAG 112 (201)
Q Consensus 41 ~~~~~~p~f~l~~~--~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~------~vv~vs~d~~~~ 112 (201)
..|.++|+|++.+. +|+.+++++++||++||+||++||++|+.+++.|++++++|+++++ .|++|+.|
T Consensus 32 ~~g~~~p~f~l~~~~~~g~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d---- 107 (183)
T 3lwa_A 32 ADRQQLPDIGGDSLMEEGTQINLSDFENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR---- 107 (183)
T ss_dssp GGCCCCCCCEEEBSSSTTCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS----
T ss_pred ccCCCCCceeccccccCCcEecHHHhCCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC----
Confidence 37899999999999 9999999999999999999999999999999999999999998888 99999987
Q ss_pred CCCCCHHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchh
Q 028944 113 QEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLK 192 (201)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~ 192 (201)
.++.+.+++|+++ ++++||++ .|..+..... |. ++++.++|++||||++|++++++.|..+.++
T Consensus 108 --~~~~~~~~~~~~~-~~~~~~~~--~d~~~~~~~~-~~----------~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~ 171 (183)
T 3lwa_A 108 --DYSRDIAQDFVTD-NGLDYPSI--YDPPFMTAAS-LG----------GVPASVIPTTIVLDKQHRPAAVFLREVTSKD 171 (183)
T ss_dssp --CCCHHHHHHHHHH-TTCCSCEE--ECTTCGGGGG-TT----------TCCTTCCSEEEEECTTSCEEEEECSCCCHHH
T ss_pred --CCCHHHHHHHHHH-cCCCccEE--ECCcchHHHH-hc----------cCCCCCCCeEEEECCCCcEEEEEcCCCCHHH
Confidence 2379999999955 69999999 5555544332 21 1357778999999999999999999998888
Q ss_pred hhhcccCC
Q 028944 193 IEVGTTIP 200 (201)
Q Consensus 193 l~~~l~~l 200 (201)
+.+.|+++
T Consensus 172 l~~~l~~l 179 (183)
T 3lwa_A 172 VLDVALPL 179 (183)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88887764
No 24
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.96 E-value=3.5e-29 Score=191.10 Aligned_cols=142 Identities=18% Similarity=0.232 Sum_probs=118.8
Q ss_pred CCCcccceEEecCCCCeeecCCCCCc-EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGK-VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
.|+.+|+|++.|.+|+.+++++++|| ++||+||++|||+|+.+++.|++++++|+++|++|++|+.|++...+.++++.
T Consensus 34 ~G~~aP~f~l~~~~G~~v~l~~~~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~ 113 (218)
T 3u5r_E 34 LGTRAADFVLPDAGGNLFTLAEFKDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLER 113 (218)
T ss_dssp TTCBCCCCCEECTTCCEECGGGGTTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHH
T ss_pred CCCcCCCcEeECCCCCEEeHHHhCCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHH
Confidence 89999999999999999999999999 59999999999999999999999999999999999999998655555589999
Q ss_pred HHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecC---------CCCCch
Q 028944 121 IQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYA---------PTTSPL 191 (201)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~---------g~~~~~ 191 (201)
+++|+++ ++++||++ .|..+... .. +++.++|++||||++|+|+++.. +..+.+
T Consensus 114 ~~~~~~~-~~~~~~~l--~D~~~~~~-~~-------------~~v~~~P~~~liD~~G~i~~~g~~d~~~~~~~~~~~~~ 176 (218)
T 3u5r_E 114 VGAEVKA-YGYGFPYL--KDASQSVA-KA-------------YGAACTPDFFLYDRERRLVYHGQFDDARPGNGKDVTGA 176 (218)
T ss_dssp HHHHHHH-HTCCSCEE--ECTTCHHH-HH-------------HTCCEESEEEEECTTCBEEEEECSSSCCTTSCCCCCCH
T ss_pred HHHHHHH-hCCCccEE--ECCccHHH-HH-------------cCCCCCCeEEEECCCCcEEEeccccccccccccccCHH
Confidence 9999955 69999999 55443332 22 26777899999999999997743 233456
Q ss_pred hhhhcccCC
Q 028944 192 KIEVGTTIP 200 (201)
Q Consensus 192 ~l~~~l~~l 200 (201)
++++.|+++
T Consensus 177 ~l~~~i~~l 185 (218)
T 3u5r_E 177 DLRAAVDAV 185 (218)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777654
No 25
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=99.95 E-value=8.2e-29 Score=180.41 Aligned_cols=135 Identities=15% Similarity=0.243 Sum_probs=107.4
Q ss_pred cCCCcccceE--EecCCCCeeecCCCCCcEEEEEEee-cCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 41 EAPKSIYDFT--VKDIRGNDVSLSGYRGKVLLVVNVA-SKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 41 ~~~~~~p~f~--l~~~~G~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
..|+++|+|+ +.|.+|+.+++++++||++||+||+ +|||+|+.+++.|++++++|+++|++|++|+.| +
T Consensus 8 ~~G~~~P~f~~~l~~~~G~~~~l~~~~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d--------~ 79 (163)
T 3gkn_A 8 VLELPAATFDLPLSLSGGTQTTLRAHAGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD--------S 79 (163)
T ss_dssp CCCCCGGGGGCCEECSTTCEECSGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS--------C
T ss_pred ccCCcCCCccccccCCCCCEEEHHHhCCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC--------C
Confidence 3899999999 9999999999999999999999998 999999999999999999999999999999976 8
Q ss_pred HHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCccc-ccccccceEEEECCCCcEEEecCCCCC
Q 028944 118 NEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLG-DAIKWNFTKFLVNKEGKVVERYAPTTS 189 (201)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~i~~~P~~~lid~~G~i~~~~~g~~~ 189 (201)
++.+++|+++ ++++||++ .|.++... ..|+..... +..| ....+.|++||||++|+|++.+.+...
T Consensus 80 ~~~~~~~~~~-~~~~~~~~--~d~~~~~~-~~~~v~~~~--~~~~~~~~~~~p~~~lid~~G~i~~~~~~~~~ 146 (163)
T 3gkn_A 80 VKSHDNFCAK-QGFAFPLV--SDGDEALC-RAFDVIKEK--NMYGKQVLGIERSTFLLSPEGQVVQAWRKVKV 146 (163)
T ss_dssp HHHHHHHHHH-HCCSSCEE--ECTTCHHH-HHTTCEEEE--EETTEEEEEECCEEEEECTTSCEEEEECSCCS
T ss_pred HHHHHHHHHH-hCCCceEE--ECCcHHHH-HHhCCcccc--ccccccccCcceEEEEECCCCeEEEEEcCCCc
Confidence 9999999965 69999999 55444332 222211100 0000 011127999999999999999865543
No 26
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.95 E-value=1.1e-28 Score=179.59 Aligned_cols=122 Identities=17% Similarity=0.220 Sum_probs=106.0
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcE-EEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKV-LLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~-~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.|+.+|+|++.|.+|+.+++++++||+ +||+|| ++|||+|+.+++.|++++++|+++|++|++|+.| +++
T Consensus 4 ~G~~~P~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d--------~~~ 75 (161)
T 3drn_A 4 VGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSD--------DIN 75 (161)
T ss_dssp TTSBCCCCEEEETTSCEEEGGGTTTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESC--------CHH
T ss_pred CCCcCCCeEeecCCCCEEEHHHhcCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCC--------CHH
Confidence 799999999999999999999999997 999999 9999999999999999999999989999999976 789
Q ss_pred HHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccc----cceEEEECCCCcEEEecCCCC
Q 028944 120 EIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKW----NFTKFLVNKEGKVVERYAPTT 188 (201)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~----~P~~~lid~~G~i~~~~~g~~ 188 (201)
.+++|+++ ++++|+++ .|.++... ..| ++.. +|++||||++|+|++.+.|..
T Consensus 76 ~~~~~~~~-~~~~~~~~--~d~~~~~~-~~~-------------~v~~~~~~~P~~~lid~~G~i~~~~~g~~ 131 (161)
T 3drn_A 76 SHKRFKEK-YKLPFILV--SDPDKKIR-ELY-------------GAKGFILPARITFVIDKKGIIRHIYNSQM 131 (161)
T ss_dssp HHHHHHHH-TTCCSEEE--ECTTSHHH-HHT-------------TCCCSSSCCCEEEEECTTSBEEEEEECSS
T ss_pred HHHHHHHH-hCCCceEE--ECCcHHHH-HHc-------------CCCCcCcccceEEEECCCCEEEEEEecCC
Confidence 99999955 69999999 44433222 222 3333 799999999999999999854
No 27
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=99.95 E-value=3.7e-28 Score=178.59 Aligned_cols=151 Identities=16% Similarity=0.220 Sum_probs=116.3
Q ss_pred CCCccc-ceEEecCCCCeeecCCCCCcEEEEEEeecCCCC-cHHhHHHHHHHHHHhcC--CCeEEEEeecCCCCCCCCCC
Q 028944 42 APKSIY-DFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGL-TQSNYKELNVLYEKYKN--QDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 42 ~~~~~p-~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~--~~~~vv~vs~d~~~~~~~~~ 117 (201)
.|+++| +|++.|.+|+.+++++++||++||+||++|||. |+.+++.|+++++++++ .++++|+||+| + +|+
T Consensus 3 ~G~~~P~~f~l~d~~G~~v~l~~~~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d----~-~d~ 77 (170)
T 3me7_A 3 LGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFD----P-KDT 77 (170)
T ss_dssp TTCBCCTTCEEEETTCCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECC----T-TCC
T ss_pred CCCcCCCCeEEEcCCcCEEchHHhCCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECC----C-CCC
Confidence 689999 999999999999999999999999999999986 99999999999999975 46999999998 4 589
Q ss_pred HHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCc--ccccccccceEEEECCCCcEEEecCCC-CCchhhh
Q 028944 118 NEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGF--LGDAIKWNFTKFLVNKEGKVVERYAPT-TSPLKIE 194 (201)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~~~i~~~P~~~lid~~G~i~~~~~g~-~~~~~l~ 194 (201)
++.+++|+++ ++.+++.|... ..++ ......+...-.... .++++.+.|++||||++|+|++.+.|. .+++++.
T Consensus 78 ~~~~~~~~~~-~~~~~~~w~~l-~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~ 154 (170)
T 3me7_A 78 LEDIKRFQKE-YGIDGKGWKVV-KAKT-SEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLEFV 154 (170)
T ss_dssp HHHHHHHHHH-TTCCSSSEEEE-EESS-HHHHHHHHHHTTCCCEEETTEEECCCEEEEECTTSBEEEEEESSSCCHHHHH
T ss_pred HHHHHHHHHH-cCCCCCCeEEE-eCCC-HHHHHHHHHHCCeEEecCCCccccCceEEEECCCCeEEEEEeCCCCCHHHHH
Confidence 9999999954 69888754210 0111 011112211100001 124678889999999999999988886 4677888
Q ss_pred hcccCC
Q 028944 195 VGTTIP 200 (201)
Q Consensus 195 ~~l~~l 200 (201)
+.|+++
T Consensus 155 ~~l~~~ 160 (170)
T 3me7_A 155 NALRLA 160 (170)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 887654
No 28
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=1.2e-28 Score=177.37 Aligned_cols=136 Identities=21% Similarity=0.275 Sum_probs=118.3
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||++|||+|+.+++.+++++++++++++.+++|+.+ .++.+.+
T Consensus 4 ~G~~~p~~~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~------~~~~~~~ 77 (153)
T 2l5o_A 4 DSKTAPAFSLPDLHGKTVSNADLQGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQP------IDPIESV 77 (153)
T ss_dssp CCTTCCSCEEECTTSCEEEHHHHTTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECT------TSCHHHH
T ss_pred CCCCCCCcEeecCCCCCccHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecC------CCCHHHH
Confidence 6899999999999999999999999999999999999999999999999999999889999999977 5789999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|+++ ++++|++. .|...... .. +++.++|+++|+|++|+++..+.|..+.+++.+.|+++
T Consensus 78 ~~~~~~-~~~~~~~~--~d~~~~~~-~~-------------~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 139 (153)
T 2l5o_A 78 RQYVKD-YGLPFTVM--YDADKAVG-QA-------------FGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTA 139 (153)
T ss_dssp HHHHHH-TTCCSEEE--ECSSCHHH-HH-------------HTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHH-cCCCceEE--cCchHHHH-HH-------------cCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 999954 69999988 44332221 11 26777899999999999999999988888888877654
No 29
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.95 E-value=2.4e-28 Score=175.96 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=110.1
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.+++|+.| ++.+.+
T Consensus 5 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d-------~~~~~~ 77 (152)
T 2lrn_A 5 TGSVAPAITGIDLKGNSVSLNDFKGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTD-------RREEDW 77 (152)
T ss_dssp TTEECCCCEEECSSSCEEESGGGTTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECC-------SCHHHH
T ss_pred CCCcCCCceeEcCCCCEEeHHHcCCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEcc-------CCHHHH
Confidence 7899999999999999999999999999999999999999999999999999999889999999988 378999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|+++ ++.+|+++. |..+. ...+... +++..+|+++|||++|+++.++. +.+++++.|++
T Consensus 78 ~~~~~~-~~~~~~~~~--d~~~~-~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~~ 138 (152)
T 2lrn_A 78 KKAIEE-DKSYWNQVL--LQKDD-VKDVLES----------YCIVGFPHIILVDPEGKIVAKEL---RGDDLYNTVEK 138 (152)
T ss_dssp HHHHHH-HTCCSEEEE--ECHHH-HHHHHHH----------TTCCSSCEEEEECTTSEEEEECC---CTTHHHHHHHH
T ss_pred HHHHHH-hCCCCeEEe--cccch-hHHHHHH----------hCCCcCCeEEEECCCCeEEEeeC---CHHHHHHHHHH
Confidence 999965 599999884 33100 0111111 36777899999999999999974 34556555544
No 30
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.95 E-value=1.3e-28 Score=179.15 Aligned_cols=143 Identities=11% Similarity=0.175 Sum_probs=112.6
Q ss_pred cccceEEecCCCCeeecCCCCCcEEEEEEeecCCCC-cHHhHHHHHHHHHHhcC----CCeEEEEeecCCCCCCCCCCHH
Q 028944 45 SIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGL-TQSNYKELNVLYEKYKN----QDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 45 ~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~----~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.+|+|++.|.+|+.+++++++||++||+||++|||+ |+.+++.|+++++++++ .++++++|++| ++.++++
T Consensus 2 ~ap~f~l~~~~G~~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d----~~~d~~~ 77 (164)
T 2ggt_A 2 LGGPFSLTTHTGERKTDKDYLGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISID----PERDTKE 77 (164)
T ss_dssp CCCCCEEEETTSCEEEGGGGTTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESC----TTTCCHH
T ss_pred CCCCeEEEeCCCCEEeHHHcCCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeC----CCCCCHH
Confidence 479999999999999999999999999999999998 99999999999999976 48999999998 5667899
Q ss_pred HHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcc----------cccccccceEEEECCCCcEEEecCCCCC
Q 028944 120 EIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFL----------GDAIKWNFTKFLVNKEGKVVERYAPTTS 189 (201)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~----------~~~i~~~P~~~lid~~G~i~~~~~g~~~ 189 (201)
.+++|++ +++.+|+.+.. . .+....+... ++.. ++.+.|.|++||||++|++++++.|..+
T Consensus 78 ~~~~~~~-~~~~~~~~l~~--~-~d~~~~~~~~-----~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~ 148 (164)
T 2ggt_A 78 AIANYVK-EFSPKLVGLTG--T-REEVDQVARA-----YRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKR 148 (164)
T ss_dssp HHHHHHH-TTCSSCEEEEC--C-HHHHHHHHHT-----TTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCC
T ss_pred HHHHHHH-HcCCCeEEEeC--C-HHHHHHHHHh-----cCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCC
Confidence 9999995 46999987721 1 0001111111 1110 0123444599999999999999999888
Q ss_pred chhhhhcccCC
Q 028944 190 PLKIEVGTTIP 200 (201)
Q Consensus 190 ~~~l~~~l~~l 200 (201)
.+++.+.|+++
T Consensus 149 ~~~l~~~l~~l 159 (164)
T 2ggt_A 149 KGEIAASIATH 159 (164)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88888877654
No 31
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.95 E-value=5.8e-28 Score=171.75 Aligned_cols=135 Identities=18% Similarity=0.274 Sum_probs=116.8
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.+.+|+.+++++ +||++||+||++||++|+.+++.+.++++++++.++.++.|+.| .+.++.+.+
T Consensus 11 ~g~~~p~~~l~~~~g~~~~l~~-~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d----~~~~~~~~~ 85 (145)
T 3erw_A 11 QPAVPAVFLMKTIEGEDISIPN-KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLV----NSEQNQQVV 85 (145)
T ss_dssp -CCSCCEEEEECTTSCEEEESC-TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECG----GGSSCHHHH
T ss_pred CCCcCCCceeecCCCCEEeHHH-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEcc----CCcCCHHHH
Confidence 7999999999999999999999 99999999999999999999999999999999778999999988 334689999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhccc
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
++|+++ ++++|+++ .|....... . +++.++|+++|+|++|+++..+.|..+.+++++.|+
T Consensus 86 ~~~~~~-~~~~~~~~--~d~~~~~~~-~-------------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 86 EDFIKA-NKLTFPIV--LDSKGELMK-E-------------YHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp HHHHHH-TTCCSCEE--ECSSSHHHH-H-------------TTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred HHHHHH-cCCceeEE--EcCchhHHH-h-------------cCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 999955 69999988 444432221 1 377788999999999999999999999988887764
No 32
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=6.2e-28 Score=173.77 Aligned_cols=136 Identities=15% Similarity=0.262 Sum_probs=117.2
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.+.+++++++++++.+++|+.| .++.+.+
T Consensus 4 ~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d------~~~~~~~ 77 (154)
T 3kcm_A 4 EENPAPDFTLNTLNGEVVKLSDLKGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSID------EGGKVAV 77 (154)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECC------TTHHHHH
T ss_pred CCCCCCCeEEEcCCCCEEehhhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcC------CcchHHH
Confidence 7899999999999999999999999999999999999999999999999999999889999999988 3458999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC--CchhhhhcccC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT--SPLKIEVGTTI 199 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~--~~~~l~~~l~~ 199 (201)
++|+++ ++.+|+++ .|.+.... .. +++.++|++||||++|++++++.|.. +.+++.+.|++
T Consensus 78 ~~~~~~-~~~~~~~~--~d~~~~~~-~~-------------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ 140 (154)
T 3kcm_A 78 EEFFRK-TGFTLPVL--LDADKRVG-KL-------------YGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNN 140 (154)
T ss_dssp HHHHHH-HCCCCCEE--ECTTCHHH-HH-------------HTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHT
T ss_pred HHHHHH-cCCCeeEE--ecCchHHH-HH-------------hCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHH
Confidence 999955 69999998 44443222 22 26777899999999999999988886 55678888776
Q ss_pred C
Q 028944 200 P 200 (201)
Q Consensus 200 l 200 (201)
+
T Consensus 141 l 141 (154)
T 3kcm_A 141 E 141 (154)
T ss_dssp C
T ss_pred H
Confidence 5
No 33
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.95 E-value=1.2e-27 Score=170.74 Aligned_cols=136 Identities=24% Similarity=0.237 Sum_probs=113.8
Q ss_pred CCCcccceEEecCCCCeeecC--CCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHh-cCCCeEEEEeecCCCCCCCCCCH
Q 028944 42 APKSIYDFTVKDIRGNDVSLS--GYRGKVLLVVNVASKCGLTQSNYKELNVLYEKY-KNQDFEVLAFPCNQFAGQEPGSN 118 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~--~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~-~~~~~~vv~vs~d~~~~~~~~~~ 118 (201)
.|+++|+|++.+.+|+.++++ +++||++||+||++||++|+.+++.+.++++++ +++++.+++|++| .+.
T Consensus 7 ~g~~~p~~~l~~~~g~~~~l~~~~~~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d-------~~~ 79 (148)
T 3fkf_A 7 VGKSAPYFSLPNEKGEKLSRSAERFRNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLD-------IDR 79 (148)
T ss_dssp TTSBCCCCCEEBTTSCEECTTSTTTTTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECC-------SCH
T ss_pred CCCcCCCeEeeCCCCCEEeccccccCCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECC-------CCH
Confidence 899999999999999999999 999999999999999999999999999999999 8888999999998 367
Q ss_pred HHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhccc
Q 028944 119 EEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
+.+++++++ ++++|+++ .|..+.. ..+... +++.++|+++|+|++|++++++. +.+++.+.|+
T Consensus 80 ~~~~~~~~~-~~~~~~~~--~d~~~~~-~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~---~~~~l~~~l~ 142 (148)
T 3fkf_A 80 EAWETAIKK-DTLSWDQV--CDFTGLS-SETAKQ----------YAILTLPTNILLSPTGKILARDI---QGEALTGKLK 142 (148)
T ss_dssp HHHHHHHHH-TTCCSEEE--CCSCGGG-CHHHHH----------TTCCSSSEEEEECTTSBEEEESC---CHHHHHHHHH
T ss_pred HHHHHHHHH-cCCCceEE--EccCCcc-hHHHHh----------cCCCCcCEEEEECCCCeEEEecC---CHHHHHHHHH
Confidence 899999955 69999988 4432211 111111 37788899999999999999876 6677777776
Q ss_pred CCC
Q 028944 199 IPL 201 (201)
Q Consensus 199 ~ll 201 (201)
++|
T Consensus 143 ~ll 145 (148)
T 3fkf_A 143 ELL 145 (148)
T ss_dssp HHC
T ss_pred HHH
Confidence 543
No 34
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.95 E-value=4.9e-28 Score=176.11 Aligned_cols=140 Identities=14% Similarity=0.229 Sum_probs=118.1
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|.++|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++++++++++++.+++|+.| ++.+.+
T Consensus 10 ~g~~~p~~~l~~~~g~~~~l~~~~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d-------~~~~~~ 82 (165)
T 3or5_A 10 RPTPAPSFSGVTVDGKPFSSASLKGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVN-------EQLPNV 82 (165)
T ss_dssp CCCBCCCCEEECTTSCEEEGGGGTTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECS-------CCHHHH
T ss_pred CCCCCCCceeeCCCCCEechhHcCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC-------CCHHHH
Confidence 7899999999999999999999999999999999999999999999999999999889999999987 478999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|+++ ++++|+++. |.. .....|.. ....++.++|++||||++|+++.++.|..+.+++.+.|+++
T Consensus 83 ~~~~~~-~~~~~~~~~--~~~--~~~~~~~~-------~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 149 (165)
T 3or5_A 83 KNYMKT-QGIIYPVMM--ATP--ELIRAFNG-------YIDGGITGIPTSFVIDASGNVSGVIVGPRSKADFDRIVKMA 149 (165)
T ss_dssp HHHHHH-HTCCSCEEE--CCH--HHHHHHHT-------TSTTCSCSSSEEEEECTTSBEEEEECSCCCHHHHHHHHHHH
T ss_pred HHHHHH-cCCCCceEe--cCH--HHHHHHhh-------hhccCCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 999955 699999884 322 12222211 11125777899999999999999999999888888877654
No 35
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.95 E-value=8.9e-28 Score=178.51 Aligned_cols=140 Identities=24% Similarity=0.237 Sum_probs=114.2
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|..+|+|++.|.+|+.+++++++||++||+||++||++|+.+++.|++++++++++++.|++|+.| .++.+.+
T Consensus 36 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d------~~~~~~~ 109 (186)
T 1jfu_A 36 APLKLPDLAFEDADGKPKKLSDFRGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINID------TRDPEKP 109 (186)
T ss_dssp SCCBCCCCEEECTTSCEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECC------CSCTTHH
T ss_pred CCCcCCCcEeEcCCCCEeeHHHcCCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECC------CCCHHHH
Confidence 7999999999999999999999999999999999999999999999999999999888999999988 3466889
Q ss_pred HHHHHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCC--chhhhhccc
Q 028944 122 QEVACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTS--PLKIEVGTT 198 (201)
Q Consensus 122 ~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~--~~~l~~~l~ 198 (201)
++|+++ +++ .|+++ .|..+.. +..+... +++.++|++||||++|+|++++.|..+ .+++.+.|+
T Consensus 110 ~~~~~~-~~~~~~~~~--~d~~~~~----~~~~~~~------~~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~ 176 (186)
T 1jfu_A 110 KTFLKE-ANLTRLGYF--NDQKAKV----FQDLKAI------GRALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIR 176 (186)
T ss_dssp HHHHHH-TTCCTTCCE--ECTTCHH----HHHHHTT------TCCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHHHHH-cCCCCCceE--ECCcchH----HHHhccc------cccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHH
Confidence 999954 688 58888 4444322 2222110 122356999999999999999988775 567777766
Q ss_pred CC
Q 028944 199 IP 200 (201)
Q Consensus 199 ~l 200 (201)
++
T Consensus 177 ~l 178 (186)
T 1jfu_A 177 AA 178 (186)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 36
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=3.2e-28 Score=175.08 Aligned_cols=135 Identities=11% Similarity=0.149 Sum_probs=109.2
Q ss_pred cccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHH
Q 028944 45 SIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEV 124 (201)
Q Consensus 45 ~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~ 124 (201)
++|+|++. .+|+.+++++++||++||+||++|||+|+.++|.|++++++++++++.+++|++| +.+++++|
T Consensus 4 pa~~~~~~-~~G~~~~l~~~~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d--------~~~~~~~~ 74 (151)
T 3raz_A 4 SADELAGW-KDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALD--------TSDNIGNF 74 (151)
T ss_dssp ---CEEET-TTCCEECGGGCCSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESS--------CHHHHHHH
T ss_pred Ccchhhcc-cCCCEecHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECC--------ChHHHHHH
Confidence 34555554 7999999999999999999999999999999999999999998889999999987 78999999
Q ss_pred HHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 125 ACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 125 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++ ++++||++. |.... ...++..+ +..+..+|++||||++|++++++.|..+.+++.+.|+++
T Consensus 75 ~~~-~~~~~~~~~--~~~~~-~~~~~~~~--------~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 138 (151)
T 3raz_A 75 LKQ-TPVSYPIWR--YTGAN-SRNFMKTY--------GNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLA 138 (151)
T ss_dssp HHH-SCCSSCEEE--ECCSC-HHHHHHTT--------TCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHH
T ss_pred HHH-cCCCCceEe--cCccc-hHHHHHHh--------CCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 955 699999984 33222 22232211 112777899999999999999999999998888887654
No 37
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.95 E-value=3.4e-28 Score=181.15 Aligned_cols=141 Identities=18% Similarity=0.242 Sum_probs=116.1
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||++||++|+.+++.|++++++++++ +.+++|+.|.....+.++.+.+
T Consensus 9 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~-~~~v~v~~d~~~~~~~d~~~~~ 87 (188)
T 2cvb_A 9 LESPLIDAELPDPRGGRYRLSQFHEPLLAVVFMCNHCPYVKGSIGELVALAERYRGK-VAFVGINANDYEKYPEDAPEKM 87 (188)
T ss_dssp TTCBCCCCEEECTTSCEEEGGGCCSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTT-EEEEEEECCCTTTCGGGSHHHH
T ss_pred CCCCCCCceeecCCCCEEeHHHhCCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcC-eEEEEEEcCccccccccCHHHH
Confidence 789999999999999999999999999999999999999999999999999999988 9999999985433334789999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEec--------CCCCCchhh
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERY--------APTTSPLKI 193 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~--------~g~~~~~~l 193 (201)
++|+++ ++++|+++ .|.++.... . +++..+|++||||++|+++++. .|..+.+++
T Consensus 88 ~~~~~~-~~~~~~~~--~d~~~~~~~-~-------------~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l 150 (188)
T 2cvb_A 88 AAFAEE-HGIFFPYL--LDETQEVAK-A-------------YRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDL 150 (188)
T ss_dssp HHHHHH-HTCCSCEE--ECSSSHHHH-H-------------TTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHH
T ss_pred HHHHHH-hCCCceEE--ECCcchHHH-H-------------cCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHH
Confidence 999965 69999988 454433221 1 2677789999999999999882 223356677
Q ss_pred hhcccCC
Q 028944 194 EVGTTIP 200 (201)
Q Consensus 194 ~~~l~~l 200 (201)
++.|+++
T Consensus 151 ~~~i~~l 157 (188)
T 2cvb_A 151 EAAIEAL 157 (188)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776654
No 38
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.95 E-value=2.9e-29 Score=183.91 Aligned_cols=150 Identities=19% Similarity=0.226 Sum_probs=119.4
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCC-cHHhHHHHHHHHHHhcCC---CeEEEEeecCCCCCCCCCC
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGL-TQSNYKELNVLYEKYKNQ---DFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~~---~~~vv~vs~d~~~~~~~~~ 117 (201)
.|+.+|+|++.|.+| .+++++++||++||+||++||++ |+.+++.|++++++++++ +++|++|++| +++++
T Consensus 12 ~G~~~p~f~l~~~~g-~~~l~~~~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d----~~~d~ 86 (172)
T 2k6v_A 12 LNPKPVDFALEGPQG-PVRLSQFQDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVD----PERDP 86 (172)
T ss_dssp EEEEECCCEEECSSS-EEEGGGSTTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESC----TTTCC
T ss_pred cCCCCCCeEEEcCCC-CCcHHHhCCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEEC----CCCCC
Confidence 678899999999999 99999999999999999999998 999999999999999864 6999999998 55678
Q ss_pred HHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCC-----cccccccccceEEEECCCCcEEEecCCCC--Cc
Q 028944 118 NEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGG-----FLGDAIKWNFTKFLVNKEGKVVERYAPTT--SP 190 (201)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~P~~~lid~~G~i~~~~~g~~--~~ 190 (201)
++.+++|+++ ++.+|+++. |... ....+...+...... ...+++.++|++|||| +|++++++.|.. +.
T Consensus 87 ~~~~~~~~~~-~~~~~~~l~--d~~~-~~~~~~~~~gv~~~~~~~~~~~~~~i~~~P~~~lid-~G~i~~~~~g~~~~~~ 161 (172)
T 2k6v_A 87 PEVADRYAKA-FHPSFLGLS--GSPE-AVREAAQTFGVFYQKSQYRGPGEYLVDHTATTFVVK-EGRLVLLYSPDKAEAT 161 (172)
T ss_dssp HHHHHHHHHH-HCTTEEEEC--CCHH-HHHHHHHHHTCCEEEEEEEETTEEEEEECCCEEEEE-TTEEEEEECHHHHTCH
T ss_pred HHHHHHHHHH-hCCCcEEEe--CCHH-HHHHHHHhcCeEEEeccCCCCCCceEecCCEEEEEE-CCEEEEEECCCCCCCH
Confidence 9999999965 699999883 3221 001222111100000 0113578889999999 999999999988 88
Q ss_pred hhhhhcccCCC
Q 028944 191 LKIEVGTTIPL 201 (201)
Q Consensus 191 ~~l~~~l~~ll 201 (201)
+++.+.|+++|
T Consensus 162 ~~l~~~l~~ll 172 (172)
T 2k6v_A 162 DRVVADLQALL 172 (172)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHhC
Confidence 89999998775
No 39
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.95 E-value=1.8e-28 Score=183.59 Aligned_cols=142 Identities=18% Similarity=0.213 Sum_probs=119.5
Q ss_pred CCCcccceEEe-cCCCCeeecCCCCCc-EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDFTVK-DIRGNDVSLSGYRGK-VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f~l~-~~~G~~~~l~~~~gk-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.|+.+|+|++. +.+|+.+++++++|| ++||+||++||++|+.+++.|++++++++++++.+++|+.|.....+.++.+
T Consensus 20 ~g~~~p~f~l~~~~~G~~~~l~~~~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~ 99 (196)
T 2ywi_A 20 LGKQAPPFALTNVIDGNVVRLEDVKSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPE 99 (196)
T ss_dssp TTCBCCCCEEEETTTCCEEEHHHHCCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHH
T ss_pred cCCcCCceeeeecCCCCEEeHHHhCCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCccccccccCHH
Confidence 78999999999 999999999999998 5999999999999999999999999999988999999999854333347899
Q ss_pred HHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEe---------cCCCCCc
Q 028944 120 EIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVER---------YAPTTSP 190 (201)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~---------~~g~~~~ 190 (201)
.+++|+++ ++++|+++ .|.++.... . +++.++|++||||++|+++++ +.|..+.
T Consensus 100 ~~~~~~~~-~~~~~~~~--~d~~~~~~~-~-------------~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~ 162 (196)
T 2ywi_A 100 NMKKVAEE-LGYPFPYL--YDETQEVAK-A-------------YDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTG 162 (196)
T ss_dssp HHHHHHHH-HTCCSCEE--ECSSCHHHH-H-------------HTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCC
T ss_pred HHHHHHHH-cCCCceEE--ECCchHHHH-H-------------hCCCCCCeEEEEcCCCeEEEccccCcccccccCccCH
Confidence 99999965 69999988 454433322 2 267777999999999999998 4577777
Q ss_pred hhhhhcccCC
Q 028944 191 LKIEVGTTIP 200 (201)
Q Consensus 191 ~~l~~~l~~l 200 (201)
+++++.|+++
T Consensus 163 ~~l~~~i~~l 172 (196)
T 2ywi_A 163 ESIRAALDAL 172 (196)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 40
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.95 E-value=3.5e-28 Score=173.57 Aligned_cols=134 Identities=15% Similarity=0.098 Sum_probs=113.8
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.+++++++++++++.+++|+.| ++.+.+
T Consensus 7 ~G~~~p~~~l~~~~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~~~~ 79 (148)
T 3hcz_A 7 LGKKAPNLYMTDTTGTYRYLYDVQAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE-------RKDEEW 79 (148)
T ss_dssp TTSBCCCCCCBCTTSCBCCGGGCCCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC-------SSSHHH
T ss_pred CCCcCCceEEecCCCCEEEhHHcCCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec-------CCHHHH
Confidence 8999999999999999999999999999999999999999999999999999999889999999987 367799
Q ss_pred HHHHHhhcCcc-cceeeeeccCCCC-chhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhccc
Q 028944 122 QEVACTMFKAE-FPIFDKIDVNGKN-AAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 122 ~~~~~~~~~~~-~~~~~~~d~~~~~-~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
++|+++ ++++ |+++ .|..+.. .... +++.++|+++|+|++|++++++.|..+.+++.+.++
T Consensus 80 ~~~~~~-~~~~~~~~~--~d~~~~~~~~~~-------------~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~ 142 (148)
T 3hcz_A 80 LKFIRS-KKIGGWLNV--RDSKNHTDFKIT-------------YDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYE 142 (148)
T ss_dssp HHHHHH-HTCTTSEEE--ECTTCCCCHHHH-------------HCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHH
T ss_pred HHHHHH-cCCCCceEE--eccccchhHHHh-------------cCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHH
Confidence 999965 5888 8888 5554431 2222 267788999999999999999988765555555443
No 41
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.95 E-value=3.5e-28 Score=178.10 Aligned_cols=146 Identities=14% Similarity=0.178 Sum_probs=112.9
Q ss_pred cceEEecCCCCeeecCCCCCcEEEEEEeecCCCC-cHHhHHHHHHHHHHhcC----CCeEEEEeecCCCCCCCCCCHHHH
Q 028944 47 YDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGL-TQSNYKELNVLYEKYKN----QDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 47 p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~----~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
|+|++.|.+|+.+++++++||++||+||++||++ |+.+++.|+++++++++ .+++|++|++| ++.++++.+
T Consensus 7 p~f~l~~~~G~~~~l~~~~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d----~~~d~~~~~ 82 (171)
T 2rli_A 7 GDFHLLDHRGRARCKADFRGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVD----PERDDVEAM 82 (171)
T ss_dssp SCCEEEETTSCEEETTTTTTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESC----STTCCHHHH
T ss_pred CCeEEEeCCCCEEeHHHhCCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEEC----CCCCCHHHH
Confidence 8999999999999999999999999999999998 99999999999999964 57999999998 556789999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhh---cC--CcccccccccceEEEECCCCcEEEecCCCCCchhhhhc
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSE---KG--GFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVG 196 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~---~~--~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~ 196 (201)
++|+++ ++.+|+.+. +.. +....+...+... .. ...++.+.|.|++||||++|++++++.|..+.+++.+.
T Consensus 83 ~~~~~~-~~~~~~~l~--~~~-~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~ 158 (171)
T 2rli_A 83 ARYVQD-FHPRLLGLT--GST-KQVAQASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDS 158 (171)
T ss_dssp HHHHHT-TCTTCCEEE--CCH-HHHHHHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHH
T ss_pred HHHHHH-cCCCeEEEe--CCH-HHHHHHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHH
Confidence 999954 699998873 211 0011111111000 00 00012355667999999999999999999888888887
Q ss_pred ccCC
Q 028944 197 TTIP 200 (201)
Q Consensus 197 l~~l 200 (201)
|+++
T Consensus 159 l~~l 162 (171)
T 2rli_A 159 VRRH 162 (171)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 42
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.95 E-value=1e-27 Score=172.26 Aligned_cols=134 Identities=23% Similarity=0.327 Sum_probs=114.6
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.+ +|+.+++++++||++||+||++|||+|+.+++.|.+++++++++|+.+++|++| .+.+++
T Consensus 5 ~G~~~P~f~l~~-~g~~~~l~~~~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~~~~ 76 (152)
T 3gl3_A 5 KGDKAPDFALPG-KTGVVKLSDKTGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLD-------AKTGDA 76 (152)
T ss_dssp TTSBCCCCEEEB-SSSEEEGGGGTTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECC-------SSHHHH
T ss_pred CCCcCCceEeeC-CCCeEeHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECC-------CCHHHH
Confidence 799999999999 999999999999999999999999999999999999999999989999999988 368899
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCc--hhhhhcccC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSP--LKIEVGTTI 199 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~--~~l~~~l~~ 199 (201)
++|+++ ++.+|+++ .|..+... .. +++..+|+++|||++|+++.++.|..+. +++.+.|++
T Consensus 77 ~~~~~~-~~~~~~~~--~d~~~~~~-~~-------------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~ 139 (152)
T 3gl3_A 77 MKFLAQ-VPAEFTVA--FDPKGQTP-RL-------------YGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILA 139 (152)
T ss_dssp HHHHHH-SCCCSEEE--ECTTCHHH-HH-------------TTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHH
T ss_pred HHHHHH-cCCCCcee--ECCcchhH-HH-------------cCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHH
Confidence 999955 69999988 55443222 11 2677789999999999999999886643 577777765
Q ss_pred C
Q 028944 200 P 200 (201)
Q Consensus 200 l 200 (201)
+
T Consensus 140 ~ 140 (152)
T 3gl3_A 140 A 140 (152)
T ss_dssp H
T ss_pred H
Confidence 3
No 43
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=99.95 E-value=1.5e-29 Score=185.04 Aligned_cols=143 Identities=15% Similarity=0.183 Sum_probs=111.8
Q ss_pred CCCcccceEEecCCCCeeecCCC--CCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGY--RGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSN 118 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~--~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 118 (201)
+|+++|+|++.|.+|+.++++++ +||++|++|| ++|||+|+.+++.|++++++|+++|+.+++||.| ++
T Consensus 7 vG~~aPdF~l~~~~G~~v~Lsd~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d--------~~ 78 (164)
T 4gqc_A 7 LGEKAPDFTLPNQDFEPVNLYEVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVD--------SP 78 (164)
T ss_dssp TTSBCCCCEEEBTTSCEEEHHHHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESS--------CH
T ss_pred CCCCCcCcEeECCCCCEEEHHHHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCC--------CH
Confidence 89999999999999999999998 8999888887 9999999999999999999999999999999976 89
Q ss_pred HHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC-----Cchhh
Q 028944 119 EEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT-----SPLKI 193 (201)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~-----~~~~l 193 (201)
+.+++|.++ ++++||++ .|.++... +.|+....... +......|++||||++|+|++.+.+.. +.+++
T Consensus 79 ~~~~~~~~~-~~~~fp~l--~D~~~~v~-~~ygv~~~~~~---~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~ei 151 (164)
T 4gqc_A 79 WCLKKFKDE-NRLAFNLL--SDYNREVI-KLYNVYHEDLK---GLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEV 151 (164)
T ss_dssp HHHHHHHHH-TTCCSEEE--ECTTSHHH-HHTTCEEEEET---TEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHH
T ss_pred HHHHHHHHh-cCccccee--ecCchHHH-HHcCCcccccc---cCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHH
Confidence 999999955 69999999 56655443 23322111111 112234589999999999998865433 34555
Q ss_pred hhcccC
Q 028944 194 EVGTTI 199 (201)
Q Consensus 194 ~~~l~~ 199 (201)
.+.+++
T Consensus 152 l~~l~~ 157 (164)
T 4gqc_A 152 VREANK 157 (164)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 44
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=99.95 E-value=3.5e-28 Score=180.15 Aligned_cols=134 Identities=15% Similarity=0.234 Sum_probs=106.0
Q ss_pred CCCc----ccceEEecCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCC
Q 028944 42 APKS----IYDFTVKDIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPG 116 (201)
Q Consensus 42 ~~~~----~p~f~l~~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~ 116 (201)
.|+. +|+|++.|.+|+.+++++++||++||+|| ++|||+|+.+++.|++++++|+++|++|++|+.|
T Consensus 23 ~Gd~ig~~aP~f~l~~~~G~~v~l~d~~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D-------- 94 (179)
T 3ixr_A 23 IGDTLNHSLLNHPLMLSGSTCKTLSDYTNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRD-------- 94 (179)
T ss_dssp TTCBCCHHHHHCCEEEGGGEEECGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESC--------
T ss_pred cCcccCCcCCCeeEECCCCCEEeHHHHCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCC--------
Confidence 6666 99999999999999999999999999998 8999999999999999999999999999999976
Q ss_pred CHHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCccc-ccccccceEEEECCCCcEEEecCCCCC
Q 028944 117 SNEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLG-DAIKWNFTKFLVNKEGKVVERYAPTTS 189 (201)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~-~~i~~~P~~~lid~~G~i~~~~~g~~~ 189 (201)
+++.+++|+++ ++++||++ .|.++... ..|...... ...| +...+.|++||||++|+|++.+.+...
T Consensus 95 ~~~~~~~~~~~-~~~~f~~l--~D~~~~~~-~~~gv~~~~--~~~g~~~~~~~p~~~lID~~G~I~~~~~~~~~ 162 (179)
T 3ixr_A 95 SVKSHDSFCAK-QGFTFPLV--SDSDAILC-KAFDVIKEK--TMYGRQVIGIERSTFLIGPTHRIVEAWRQVKV 162 (179)
T ss_dssp CHHHHHHHHHH-HTCCSCEE--ECTTCHHH-HHTTCEEEE--CCC--CEEEECCEEEEECTTSBEEEEECSCCS
T ss_pred CHHHHHHHHHH-cCCceEEE--ECCchHHH-HHcCCcccc--cccCcccCCcceEEEEECCCCEEEEEEcCCCC
Confidence 78999999955 69999999 55544332 223221100 0000 112246999999999999999865443
No 45
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=99.95 E-value=1.7e-27 Score=175.04 Aligned_cols=141 Identities=13% Similarity=0.115 Sum_probs=111.4
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
.|+.+|+|++.|.+|+.+++++++||++||+|| ++|||+|+.+++.|+++++++ ++++|++|+.| +++.
T Consensus 23 ~g~~~P~f~l~~~~G~~~~l~~~~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~--~~v~vv~Is~d--------~~~~ 92 (171)
T 2yzh_A 23 VGDRAPEAVVVTKDLQEKIVGGAKDVVQVIITVPSLDTPVCETETKKFNEIMAGM--EGVDVTVVSMD--------LPFA 92 (171)
T ss_dssp TTSBCCCEEEEETTSCEEEESSCCSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------CHHH
T ss_pred CCCcCCceEEECCCCCEeeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHc--CCceEEEEeCC--------CHHH
Confidence 799999999999999999999999999999999 799999999999999999999 67999999976 7889
Q ss_pred HHHHHHhhcCc-ccceeeeec-cCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCC-----CCCchhh
Q 028944 121 IQEVACTMFKA-EFPIFDKID-VNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAP-----TTSPLKI 193 (201)
Q Consensus 121 ~~~~~~~~~~~-~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g-----~~~~~~l 193 (201)
+++|+++ +++ +||++ .| .++.. +.|+...... ... + .+.|++||||++|+|++.+.| ..+.+++
T Consensus 93 ~~~~~~~-~~~~~~~~l--~D~~~~~~--~~~gv~~~~~-~~~--g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~l 163 (171)
T 2yzh_A 93 QKRFCES-FNIQNVTVA--SDFRYRDM--EKYGVLIGEG-ALK--G-ILARAVFIIDKEGKVAYVQLVPEITEEPNYDEV 163 (171)
T ss_dssp HHHHHHH-TTCCSSEEE--ECTTTCGG--GGGTCBBCSS-TTT--T-SBCCEEEEECTTSBEEEEEECSBTTSCCCCHHH
T ss_pred HHHHHHH-cCCCCeEEe--ecCccCcH--HHhCCEeccc-ccC--C-ceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHH
Confidence 9999954 699 89998 55 33333 3333211000 000 1 136999999999999999864 2345778
Q ss_pred hhcccCCC
Q 028944 194 EVGTTIPL 201 (201)
Q Consensus 194 ~~~l~~ll 201 (201)
.+.|+++|
T Consensus 164 l~~l~~ll 171 (171)
T 2yzh_A 164 VNKVKELI 171 (171)
T ss_dssp HHHHHHC-
T ss_pred HHHHHhhC
Confidence 88888765
No 46
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.95 E-value=2.6e-27 Score=170.90 Aligned_cols=129 Identities=23% Similarity=0.323 Sum_probs=108.0
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||++|||+|+.++|.|++++++|+++|+.|++|+.|. ..+.+
T Consensus 11 ~g~~~p~f~l~~~~G~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~-------~~~~~ 83 (152)
T 2lrt_A 11 KEASIIDIQLKDLKGNTRSLTDLKGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDG-------DEHFW 83 (152)
T ss_dssp CTTCSCCCCEEBTTSCEECTTTGGGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSC-------CHHHH
T ss_pred cCCCCCCeEEEcCCCCEEeHHHhCCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccC-------CHHHH
Confidence 78899999999999999999999999999999999999999999999999999998899999999983 56778
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhh
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKI 193 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l 193 (201)
++|. . +.+|+.+ .|.++... .+... +++..+|++||||++|++++++.|..+.++.
T Consensus 84 ~~~~-~--~~~~~~~--~d~~~~~~-~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~e~~ 139 (152)
T 2lrt_A 84 KTSA-D--NLPWVCV--RDANGAYS-SYISL----------YNVTNLPSVFLVNRNNELSARGENIKDLDEA 139 (152)
T ss_dssp HHHH-T--TCSSEEE--ECSSGGGC-HHHHH----------HTCCSCSEEEEEETTTEEEEETTTCSCHHHH
T ss_pred HHHH-h--CCCceEE--ECCCCcch-HHHHH----------cCcccCceEEEECCCCeEEEecCCHHHHHHH
Confidence 8887 3 4678888 55544321 11111 2667779999999999999999998876653
No 47
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.95 E-value=1.3e-27 Score=174.23 Aligned_cols=138 Identities=20% Similarity=0.215 Sum_probs=117.6
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC-----------CC
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN-----------QF 110 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d-----------~~ 110 (201)
.|+.+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|.+++++++ ++.|++|+.| ++
T Consensus 13 ~g~~~p~~~l~~~~g~~~~l~~~~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~--~v~vv~i~~d~~~~~~~~~~~~~ 90 (165)
T 3ha9_A 13 VLEREASFSLTTIDGEVISLNNVGGDVVILWFMAAWCPSCVYMADLLDRLTEKYR--EISVIAIDFWTAEALKALGLNKP 90 (165)
T ss_dssp HHHHHHCCCEEBTTSCEECGGGCCSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEECCSHHHHHHHTCCST
T ss_pred ccCcCCCCEeecCCCCEeeHHHhCCCEEEEEEECCCCcchhhhHHHHHHHHHHcC--CcEEEEEEecccccccccccccc
Confidence 7889999999999999999999999999999999999999999999999999998 7999999987 34
Q ss_pred CCCCCCCHHHHHHHHHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC-
Q 028944 111 AGQEPGSNEEIQEVACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT- 188 (201)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~- 188 (201)
+.+++++.+.+++|+++ +++ +|+++ .| ++... .. +++.++|+++|||++|+++. .|..
T Consensus 91 ~~~~~~~~~~~~~~~~~-~~~~~~~~~--~d-~~~~~-~~-------------~~v~~~P~~~lid~~G~i~~--~g~~~ 150 (165)
T 3ha9_A 91 GYPPPDTPEMFRKFIAN-YGDPSWIMV--MD-DGSLV-EK-------------FNVRSIDYIVIMDKSSNVLY--AGTTP 150 (165)
T ss_dssp TSCCCCCHHHHHHHHHH-HSCTTSEEE--EC-CSHHH-HH-------------TTCCSSSEEEEEETTCCEEE--EEESC
T ss_pred cCCCCCCHHHHHHHHHH-cCCCCeeEE--eC-hHHHH-HH-------------hCCCCceEEEEEcCCCcEEE--eCCCC
Confidence 55566899999999965 599 89998 44 32221 21 37778899999999999998 6777
Q ss_pred CchhhhhcccCCC
Q 028944 189 SPLKIEVGTTIPL 201 (201)
Q Consensus 189 ~~~~l~~~l~~ll 201 (201)
+.+++++.|++++
T Consensus 151 ~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 151 SLGELESVIKSVQ 163 (165)
T ss_dssp CHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHh
Confidence 7888888887764
No 48
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.95 E-value=2.4e-27 Score=175.17 Aligned_cols=134 Identities=13% Similarity=0.111 Sum_probs=112.6
Q ss_pred ccCCCcccceEEecCCC--CeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 40 QEAPKSIYDFTVKDIRG--NDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 40 ~~~~~~~p~f~l~~~~G--~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
...|+.+|+|++.+.+| +.+++++++||++||+||++|||+|+.+++.|++++++ ++.|++|++| ++
T Consensus 30 ~~~G~~~P~f~l~~~~g~~~~~~l~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~vs~~-------d~ 98 (176)
T 3kh7_A 30 ALIGKPFPAFDLPSVQDPARRLTEADLKGKPALVNVWGTWCPSCRVEHPELTRLAEQ----GVVIYGINYK-------DD 98 (176)
T ss_dssp TTTTSBCCCCEEEBSSCTTSEEEGGGGCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCEEEEEEES-------CC
T ss_pred cccCCcCCCcEecccCCCCceecHHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHC----CCEEEEEeCC-------CC
Confidence 34899999999999999 88999999999999999999999999999999999876 6999999986 48
Q ss_pred HHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcc
Q 028944 118 NEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGT 197 (201)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 197 (201)
.+.+++|+++ ++++|+.+. .|.++... .. +++..+|++||||++|+|++++.|..+.+++.+.|
T Consensus 99 ~~~~~~~~~~-~~~~~~~~~-~d~~~~~~-~~-------------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 162 (176)
T 3kh7_A 99 NAAAIKWLNE-LHNPYLLSI-SDADGTLG-LD-------------LGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQL 162 (176)
T ss_dssp HHHHHHHHHH-TTCCCSEEE-EETTCHHH-HH-------------HTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHT
T ss_pred HHHHHHHHHH-cCCCCceEE-ECCcchHH-HH-------------cCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHH
Confidence 9999999955 699998532 34443222 22 26777799999999999999999999888877776
Q ss_pred cCC
Q 028944 198 TIP 200 (201)
Q Consensus 198 ~~l 200 (201)
+++
T Consensus 163 ~~~ 165 (176)
T 3kh7_A 163 APL 165 (176)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 49
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=99.95 E-value=2.5e-27 Score=176.49 Aligned_cols=133 Identities=11% Similarity=0.130 Sum_probs=111.3
Q ss_pred CCCcccceEEecCCCC----eeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCC
Q 028944 42 APKSIYDFTVKDIRGN----DVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPG 116 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~----~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~ 116 (201)
.|+.+|+|++.+.+|+ .+++++++||++||+|| ++|||+|+.+++.|++++++++++++++++|+.|
T Consensus 3 ~G~~~P~f~l~~~~g~~~~~~~~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d-------- 74 (187)
T 1we0_A 3 IGTEVQPFRAQAFQSGKDFFEVTEADLKGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTD-------- 74 (187)
T ss_dssp TTCBCCCCEEEEECSSSCCEEEETTTTSSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESS--------
T ss_pred CCCcCCCeEEeccCCCccceEecHHHHCCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECC--------
Confidence 6899999999999999 99999999999999999 9999999999999999999999889999999987
Q ss_pred CHHHHHHHHHhhc----CcccceeeeeccCCCCchhhHHHHHhhcCCccccccc------ccceEEEECCCCcEEEecCC
Q 028944 117 SNEEIQEVACTMF----KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIK------WNFTKFLVNKEGKVVERYAP 186 (201)
Q Consensus 117 ~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~i~~~~~g 186 (201)
+.+.+++|++ .+ +.+|+++ .|.++... ..| ++. ++|++||||++|+|++++.|
T Consensus 75 ~~~~~~~~~~-~~~~~~~~~~~~~--~d~~~~~~-~~~-------------~v~~~~~g~~~P~~~lid~~G~i~~~~~g 137 (187)
T 1we0_A 75 THFVHKAWHE-NSPAVGSIEYIMI--GDPSQTIS-RQF-------------DVLNEETGLADRGTFIIDPDGVIQAIEIN 137 (187)
T ss_dssp CHHHHHHHHH-SCHHHHTCCSEEE--ECTTCHHH-HHT-------------TCEETTTTEECEEEEEECTTSBEEEEEEE
T ss_pred CHHHHHHHHH-HhccccCCCceEE--ECCchHHH-HHh-------------CCCcCCCCceeeEEEEECCCCeEEEEEec
Confidence 6789999995 45 7889988 44432222 222 344 67999999999999999887
Q ss_pred CC----CchhhhhcccC
Q 028944 187 TT----SPLKIEVGTTI 199 (201)
Q Consensus 187 ~~----~~~~l~~~l~~ 199 (201)
.. +.+++.+.|++
T Consensus 138 ~~~~~~~~~~l~~~l~~ 154 (187)
T 1we0_A 138 ADGIGRDASTLINKVKA 154 (187)
T ss_dssp CTTSCCCTTHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 65 45667666654
No 50
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.95 E-value=5.3e-27 Score=168.53 Aligned_cols=136 Identities=18% Similarity=0.265 Sum_probs=114.4
Q ss_pred CCCccc-ceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIY-DFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p-~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
.|+++| +|++.+.+|+.+++++++||++||+||++||++|+.+++.+++++++++++++.+++|+.| ++.+.
T Consensus 5 ~G~~~p~~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d-------~~~~~ 77 (152)
T 2lja_A 5 SGNPSAASFSYPDINGKTVSLADLKGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCD-------KNKKA 77 (152)
T ss_dssp TTCCCSSSCEEEETTTEEEESTTTTTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECC-------SCHHH
T ss_pred cCCCCCcccEeecCCCCEeeHHHcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEcc-------CcHHH
Confidence 789999 9999999999999999999999999999999999999999999999999889999999988 35689
Q ss_pred HHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 121 IQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++|+++ ++++++.+. .|... .+... +++.++|+++|+|++|++++++.|..+.+++++.|+++
T Consensus 78 ~~~~~~~-~~~~~~~~~-~d~~~----~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 141 (152)
T 2lja_A 78 WENMVTK-DQLKGIQLH-MGTDR----TFMDA----------YLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNEL 141 (152)
T ss_dssp HHHHHHH-HTCCSEEEE-CSSCT----HHHHH----------TTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHH
T ss_pred HHHHHHh-cCCCCceee-cCcch----hHHHH----------cCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHH
Confidence 9999965 588865442 23222 11111 26777899999999999999999988888888877643
No 51
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=99.95 E-value=1.4e-27 Score=182.46 Aligned_cols=143 Identities=17% Similarity=0.194 Sum_probs=110.6
Q ss_pred cccccCCCcccceEEecC--CC--CeeecCCC-CCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCC
Q 028944 37 MATQEAPKSIYDFTVKDI--RG--NDVSLSGY-RGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQF 110 (201)
Q Consensus 37 ~~~~~~~~~~p~f~l~~~--~G--~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~ 110 (201)
|+....|+.+|+|++.+. +| +.++++++ +||++||+|| ++|||+|+.+++.|++++++|+++|++||+||.|
T Consensus 22 M~~l~~G~~aP~F~l~~~~~~G~~~~v~L~d~~~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D-- 99 (221)
T 2c0d_A 22 MKLSLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVD-- 99 (221)
T ss_dssp ----CTTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESS--
T ss_pred cccCCCCCCCCCeEEeccccCCCccEEeHHHHcCCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCC--
Confidence 342348999999999999 99 99999999 9999999999 9999999999999999999999889999999986
Q ss_pred CCCCCCCHHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEe
Q 028944 111 AGQEPGSNEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVER 183 (201)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 183 (201)
+.+.+++|+++ + +++||++ .|..+... ..|... .. . | ...|++||||++|+|++.
T Consensus 100 ------~~~~~~~~~~~-~~~~~g~~~~~fp~l--~D~~~~~~-~~ygv~-~~-~---g---~~~P~~~lID~~G~I~~~ 161 (221)
T 2c0d_A 100 ------SVYSHLAWKNM-PIEKGGIGNVEFTLV--SDINKDIS-KNYNVL-YD-N---S---FALRGLFIIDKNGCVRHQ 161 (221)
T ss_dssp ------CHHHHHHHHHS-CGGGTCCCSCSSEEE--ECTTSHHH-HHTTCE-ET-T---T---EECEEEEEECTTSBEEEE
T ss_pred ------CHHHHHHHHHH-hhhhcCccCCceEEE--ECCchHHH-HHcCCc-cc-C---C---CccceEEEECCCCeEEEE
Confidence 78899999954 5 6789988 45433222 222211 00 0 0 256999999999999999
Q ss_pred cCCCC----CchhhhhcccC
Q 028944 184 YAPTT----SPLKIEVGTTI 199 (201)
Q Consensus 184 ~~g~~----~~~~l~~~l~~ 199 (201)
+.|.. +.+++.+.|++
T Consensus 162 ~~g~~~~~~~~~ell~~l~~ 181 (221)
T 2c0d_A 162 TVNDLPIGRNVQEVLRTIDS 181 (221)
T ss_dssp EEECTTCCCCHHHHHHHHHH
T ss_pred EecCCCCCCCHHHHHHHHHH
Confidence 86643 34566666554
No 52
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=99.94 E-value=7e-28 Score=179.60 Aligned_cols=139 Identities=10% Similarity=0.127 Sum_probs=109.8
Q ss_pred CCCcccceEEecC-CC--CeeecCCCCCcEEEEEEee-cCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 42 APKSIYDFTVKDI-RG--NDVSLSGYRGKVLLVVNVA-SKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 42 ~~~~~p~f~l~~~-~G--~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
.|+.+|+|++.+. +| +.+++++++||++||+||+ +|||+|+.+++.|++++++|+++|++|++||.| +
T Consensus 3 ~G~~aP~f~l~~~~~G~~~~v~l~~~~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d--------~ 74 (186)
T 1n8j_A 3 INTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTD--------T 74 (186)
T ss_dssp TTCBCCCCEEEEEETTEEEEEEHHHHTTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESS--------C
T ss_pred CCCcCCCcEeecccCCcceEEEHHHHCCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECC--------C
Confidence 7899999999999 59 8999999999999999995 999999999999999999999889999999977 7
Q ss_pred HHHHHHHHHhhc----CcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC----C
Q 028944 118 NEEIQEVACTMF----KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT----S 189 (201)
Q Consensus 118 ~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~----~ 189 (201)
.+.+++|++ ++ +++||++ .|..+... ..|+..... . + .+.|++||||++|+|++.+.|.. +
T Consensus 75 ~~~~~~~~~-~~~~~~~~~fp~l--~D~~~~~~-~~ygv~~~~----~--g-~~~p~~~lID~~G~i~~~~~~~~~~~~~ 143 (186)
T 1n8j_A 75 HFTHKAWHS-SSETIAKIKYAMI--GDPTGALT-RNFDNMRED----E--G-LADRATFVVDPQGIIQAIEVTAEGIGRD 143 (186)
T ss_dssp HHHHHHHHH-HCTTGGGCCSEEE--ECTTSHHH-HHTTCEETT----T--T-EECEEEEEECTTSBEEEEEEECTTBCCC
T ss_pred HHHHHHHHH-HcCcccCCceeEE--ECCchHHH-HHhCCccCC----C--C-ceeeEEEEECCCCeEEEEEecCCCCCCC
Confidence 889999995 46 7889988 45443322 222111000 0 1 14699999999999999987754 3
Q ss_pred chhhhhcccC
Q 028944 190 PLKIEVGTTI 199 (201)
Q Consensus 190 ~~~l~~~l~~ 199 (201)
.+++.+.|++
T Consensus 144 ~~~l~~~l~~ 153 (186)
T 1n8j_A 144 ASDLLRKIKA 153 (186)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5566666654
No 53
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.94 E-value=2.9e-27 Score=177.41 Aligned_cols=133 Identities=10% Similarity=0.109 Sum_probs=111.2
Q ss_pred CCCcccceEEecCC-------------C--CeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEe
Q 028944 42 APKSIYDFTVKDIR-------------G--NDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAF 105 (201)
Q Consensus 42 ~~~~~p~f~l~~~~-------------G--~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~v 105 (201)
.|+.+|+|++.+.+ | +.+++++++||++||+|| ++|||+|+.+++.|++++++|++++++|++|
T Consensus 6 ~G~~~P~f~l~~~~~~~~~~~~~~~~~G~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~V 85 (195)
T 2bmx_A 6 IGDQFPAYQLTALIGGDLSKVDAKQPGDYFTTITSDEHPGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGV 85 (195)
T ss_dssp TTCBCCCCEEEEECSSCGGGSCCSSGGGGEEEEETTSSTTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEE
T ss_pred CCCcCCCcCcccccccccccccccccCCCccEeeHHHhCCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 79999999999988 7 799999999999999999 9999999999999999999999889999999
Q ss_pred ecCCCCCCCCCCHHHHHHHHHhhc----CcccceeeeeccCCCCchhhHHHHHhhcCCccccccc-----ccceEEEECC
Q 028944 106 PCNQFAGQEPGSNEEIQEVACTMF----KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIK-----WNFTKFLVNK 176 (201)
Q Consensus 106 s~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~P~~~lid~ 176 (201)
+.| +.+.+++|++ ++ +++|+++ .|..+... ..| ++. ++|++||||+
T Consensus 86 s~d--------~~~~~~~~~~-~~~~~~~~~~~~~--~d~~~~~~-~~~-------------~v~~~~g~~~P~~~lid~ 140 (195)
T 2bmx_A 86 SID--------SEFAHFQWRA-QHNDLKTLPFPML--SDIKRELS-QAA-------------GVLNADGVADRVTFIVDP 140 (195)
T ss_dssp ESS--------CHHHHHHHHH-HCTTGGGCCSCEE--ECTTSHHH-HHH-------------TCBCTTSSBCEEEEEECT
T ss_pred ECC--------CHHHHHHHHH-HhccccCCceeEE--eCCchHHH-HHh-------------CCcccCCCccceEEEEcC
Confidence 987 6889999995 45 7889988 44332222 222 444 6799999999
Q ss_pred CCcEEEecCCCC----CchhhhhcccC
Q 028944 177 EGKVVERYAPTT----SPLKIEVGTTI 199 (201)
Q Consensus 177 ~G~i~~~~~g~~----~~~~l~~~l~~ 199 (201)
+|+|++++.|.. +.+++.+.|++
T Consensus 141 ~G~i~~~~~g~~~~~~~~~~l~~~l~~ 167 (195)
T 2bmx_A 141 NNEIQFVSATAGSVGRNVDEVLRVLDA 167 (195)
T ss_dssp TSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 999999987765 45667666654
No 54
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=99.94 E-value=3.9e-27 Score=170.88 Aligned_cols=124 Identities=23% Similarity=0.308 Sum_probs=105.7
Q ss_pred CCCcccceEEecCCCCeeecCCCCCc-EEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGK-VLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.|+.+|+|++.|.+|+.+++++++|| ++||+|| ++||++|+.+++.|++++++++++++++++|+.| +.+
T Consensus 11 ~G~~~p~f~l~~~~G~~~~l~~~~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d--------~~~ 82 (160)
T 1xvw_A 11 VGATAPDFTLRDQNQQLVTLRGYRGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVG--------PPP 82 (160)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESC--------CHH
T ss_pred CCCCCCCeEeEcCCCCEEeHHHhcCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCC--------CHH
Confidence 89999999999999999999999998 9999998 9999999999999999999999889999999986 789
Q ss_pred HHHHHHHhhcCcccceeeeecc--CCCCchhhHHHHHhhcCCccccccc----ccc--eEEEECCCCcEEEecCCCCCc
Q 028944 120 EIQEVACTMFKAEFPIFDKIDV--NGKNAAPIYKFLKSEKGGFLGDAIK----WNF--TKFLVNKEGKVVERYAPTTSP 190 (201)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~d~--~~~~~~~~~~~~~~~~~~~~~~~i~----~~P--~~~lid~~G~i~~~~~g~~~~ 190 (201)
.+++|+++ ++++|+++ .|. ++.. ...| ++. .+| ++||||++|+|++++.|..+.
T Consensus 83 ~~~~~~~~-~~~~~~~~--~d~~~~~~~-~~~~-------------~v~~~~~~~p~~~~~lid~~G~i~~~~~g~~~~ 144 (160)
T 1xvw_A 83 THKIWATQ-SGFTFPLL--SDFWPHGAV-SQAY-------------GVFNEQAGIANRGTFVVDRSGIIRFAEMKQPGE 144 (160)
T ss_dssp HHHHHHHH-HTCCSCEE--ECTTTTTHH-HHHT-------------TCEETTTTEECSEEEEECTTSBEEEEEECCTTC
T ss_pred HHHHHHHh-cCCCceEE--ecCCcChHH-HHHc-------------CCccccCCCeeeeEEEECCCCeEEEEEecCCCC
Confidence 99999955 69999988 443 2222 1222 333 457 999999999999999887643
No 55
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=99.94 E-value=1.3e-27 Score=180.02 Aligned_cols=152 Identities=15% Similarity=0.152 Sum_probs=111.4
Q ss_pred CCCcc--cceEEecCCCCeeecCCCCCcEEEEEEeecCCCC-cHHhHHHHHHHHHHhcC---CCeEEEEeecCCCCCCCC
Q 028944 42 APKSI--YDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGL-TQSNYKELNVLYEKYKN---QDFEVLAFPCNQFAGQEP 115 (201)
Q Consensus 42 ~~~~~--p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~---~~~~vv~vs~d~~~~~~~ 115 (201)
.|+++ |+|++.|.+|+.+++++++||++||+||++|||+ |+.+++.|+++++++++ .+++|++|++| ++.
T Consensus 15 ~g~~~~~p~f~l~d~~G~~v~l~~~~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D----~~~ 90 (200)
T 2b7k_A 15 YGKPSLGGPFHLEDMYGNEFTEKNLLGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCD----PAR 90 (200)
T ss_dssp -CCCCCCCCCEEEETTSCEEEGGGGTTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESC----TTT
T ss_pred cCCCCcCCCEEEEcCCCCEEeHHHcCCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECC----CCC
Confidence 56665 9999999999999999999999999999999998 99999999999998874 37999999998 556
Q ss_pred CCHHHHHHHHHhhcCcccceeeee-ccCCCCchhhHHHHHhhcC---CcccccccccceEEEECCCCcEEEecCCCCCch
Q 028944 116 GSNEEIQEVACTMFKAEFPIFDKI-DVNGKNAAPIYKFLKSEKG---GFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPL 191 (201)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~---~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~ 191 (201)
|+++.+++|++ +++.+|+.+.+. |..+. ....|+....... ...++.+.|.|++||||++|+|++.+.|..+.+
T Consensus 91 d~~~~~~~~~~-~~~~~~~~l~~~~d~~~~-~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~ 168 (200)
T 2b7k_A 91 DSPAVLKEYLS-DFHPSILGLTGTFDEVKN-ACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEK 168 (200)
T ss_dssp CCHHHHHHHHT-TSCTTCEEEECCHHHHHH-HHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTT
T ss_pred CCHHHHHHHHH-HcCCCceEEeCCHHHHHH-HHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHH
Confidence 79999999995 568888776311 11111 1111211100000 001124567789999999999999999888776
Q ss_pred hhhhcccC
Q 028944 192 KIEVGTTI 199 (201)
Q Consensus 192 ~l~~~l~~ 199 (201)
.+.+.|++
T Consensus 169 ~~~~~i~~ 176 (200)
T 2b7k_A 169 TGVDKIVE 176 (200)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66555543
No 56
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=99.94 E-value=4.3e-27 Score=171.59 Aligned_cols=137 Identities=12% Similarity=0.086 Sum_probs=107.7
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEee-cCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVA-SKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||+ +||++|+.+++.|+++++++ ++++|++||.| +++.
T Consensus 18 ~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~--~~v~vv~is~d--------~~~~ 87 (163)
T 1psq_A 18 VGDKALDFSLTTTDLSKKSLADFDGKKKVLSVVPSIDTGICSTQTRRFNEELAGL--DNTVVLTVSMD--------LPFA 87 (163)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC--TTEEEEEEESS--------CHHH
T ss_pred CCCCCCCEEEEcCCCcEeeHHHhCCCEEEEEEECCCCCCccHHHHHHHHHHHHHc--CCcEEEEEECC--------CHHH
Confidence 8999999999999999999999999999999995 99999999999999999999 67999999976 7889
Q ss_pred HHHHHHhhcCc-ccceeeeec-cCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC-----Cchhh
Q 028944 121 IQEVACTMFKA-EFPIFDKID-VNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT-----SPLKI 193 (201)
Q Consensus 121 ~~~~~~~~~~~-~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~-----~~~~l 193 (201)
+++|+++ +++ +||++ .| .++.. ...|+..... .++ +.|++||||++|+|++.+.|.. +.+++
T Consensus 88 ~~~~~~~-~~~~~~~~l--~D~~~~~~-~~~~gv~~~~------~g~-~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~ 156 (163)
T 1psq_A 88 QKRWCGA-EGLDNAIML--SDYFDHSF-GRDYALLINE------WHL-LARAVFVLDTDNTIRYVEYVDNINSEPNFEAA 156 (163)
T ss_dssp HHHHHHH-HTCTTSEEE--ECTTTCHH-HHHHTCBCTT------TCS-BCCEEEEECTTCBEEEEEECSBTTSCCCHHHH
T ss_pred HHHHHHh-cCCCCcEEe--cCCchhHH-HHHhCCcccc------CCc-eEEEEEEEcCCCeEEEEEecCCcCCCCCHHHH
Confidence 9999965 699 89988 45 33322 2223211000 011 2499999999999999987642 22566
Q ss_pred hhcccC
Q 028944 194 EVGTTI 199 (201)
Q Consensus 194 ~~~l~~ 199 (201)
.+.|++
T Consensus 157 l~~l~~ 162 (163)
T 1psq_A 157 IAAAKA 162 (163)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 666654
No 57
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=99.94 E-value=5.4e-27 Score=171.57 Aligned_cols=137 Identities=18% Similarity=0.117 Sum_probs=107.0
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
.|+++|+|++.|.+|+.+++++++||++||+|| ++|||+|+.+++.|++++++ ++++|++||.| +++.
T Consensus 22 ~G~~aP~f~l~~~~G~~~~l~~~~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~---~~~~vv~is~d--------~~~~ 90 (166)
T 3p7x_A 22 EGDFAPDFTVLDNDLNQVTLADYAGKKKLISVVPSIDTGVCDQQTRKFNSDASK---EEGIVLTISAD--------LPFA 90 (166)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCTTSHHHHHHHHHHHHHSCT---TTSEEEEEESS--------CHHH
T ss_pred CCCCCCCeEEEcCCCCEEeHHHhCCCcEEEEEECCCCCCccHHHHHHHHHHhhc---CCCEEEEEECC--------CHHH
Confidence 899999999999999999999999999999999 68999999999999999877 67999999976 8999
Q ss_pred HHHHHHhhcCc-ccceeeeecc-CCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCC-----CCchhh
Q 028944 121 IQEVACTMFKA-EFPIFDKIDV-NGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPT-----TSPLKI 193 (201)
Q Consensus 121 ~~~~~~~~~~~-~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~-----~~~~~l 193 (201)
+++|+++ +++ +||++ .|. ++ .....|+..... .+ .+.|++||||++|+|++.+.+. .+.+++
T Consensus 91 ~~~~~~~-~~~~~~~~l--~D~~~~-~~~~~~gv~~~~------~g-~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~i 159 (166)
T 3p7x_A 91 QKRWCAS-AGLDNVITL--SDHRDL-SFGENYGVVMEE------LR-LLARAVFVLDADNKVVYKEIVSEGTDFPDFDAA 159 (166)
T ss_dssp HHHHHHH-HTCSSCEEE--ECTTTC-HHHHHHTCEETT------TT-EECCEEEEECTTCBEEEEEECSBTTSCCCHHHH
T ss_pred HHHHHHH-cCCCceEEc--cCCchh-HHHHHhCCcccc------CC-ceeeEEEEECCCCeEEEEEEcCCcccCCCHHHH
Confidence 9999965 699 89999 555 33 223333221100 01 1369999999999999985433 234566
Q ss_pred hhcccCC
Q 028944 194 EVGTTIP 200 (201)
Q Consensus 194 ~~~l~~l 200 (201)
.+.|+++
T Consensus 160 l~~l~~l 166 (166)
T 3p7x_A 160 LAAYKNI 166 (166)
T ss_dssp HHHHHTC
T ss_pred HHHHhcC
Confidence 6666653
No 58
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=99.94 E-value=3e-27 Score=177.69 Aligned_cols=134 Identities=13% Similarity=0.112 Sum_probs=111.4
Q ss_pred CCCcccceEEecC--CCC---eeecCCC-CCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCC
Q 028944 42 APKSIYDFTVKDI--RGN---DVSLSGY-RGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQE 114 (201)
Q Consensus 42 ~~~~~p~f~l~~~--~G~---~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~ 114 (201)
.|+.+|+|++.+. +|+ .++++++ +||++||+|| ++|||+|+.+++.|+++++++++++++|++|+.|
T Consensus 3 ~G~~~P~f~l~~~~~~G~~~~~v~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d------ 76 (198)
T 1zof_A 3 VTKLAPDFKAPAVLGNNEVDEHFELSKNLGKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSID------ 76 (198)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEETTTSCCSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESS------
T ss_pred CCCcCCceEeecccCCCcccceEEHHHHhCCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECC------
Confidence 7899999999999 898 9999999 9999999999 9999999999999999999999889999999987
Q ss_pred CCCHHHHHHHHHhh------cCcccceeeeeccCCCCchhhHHHHHhhcCCccccccc-----ccceEEEECCCCcEEEe
Q 028944 115 PGSNEEIQEVACTM------FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIK-----WNFTKFLVNKEGKVVER 183 (201)
Q Consensus 115 ~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~P~~~lid~~G~i~~~ 183 (201)
+++.+++|+++. ++++||++ .|.++... ..| ++. ++|++||||++|+|++.
T Consensus 77 --~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~-~~~-------------~v~~~~g~~~P~~~lid~~G~i~~~ 138 (198)
T 1zof_A 77 --SEQVHFAWKNTPVEKGGIGQVSFPMV--ADITKSIS-RDY-------------DVLFEEAIALRGAFLIDKNMKVRHA 138 (198)
T ss_dssp --CHHHHHHHHTSCGGGTCCCCCSSCEE--ECTTSHHH-HHT-------------TCEETTTEECEEEEEEETTTEEEEE
T ss_pred --CHHHHHHHHHhhhhcccccCceeEEE--ECCchHHH-HHh-------------CCcccCCcccceEEEECCCCEEEEE
Confidence 678999999540 58889988 44433222 222 455 77999999999999999
Q ss_pred cCCCC----CchhhhhcccC
Q 028944 184 YAPTT----SPLKIEVGTTI 199 (201)
Q Consensus 184 ~~g~~----~~~~l~~~l~~ 199 (201)
+.|.. +.+++.+.|++
T Consensus 139 ~~g~~~~~~~~~~l~~~l~~ 158 (198)
T 1zof_A 139 VINDLPLGRNADEMLRMVDA 158 (198)
T ss_dssp EEESSSCCCHHHHHHHHHHH
T ss_pred EecCCCCCCCHHHHHHHHHH
Confidence 87765 34566666554
No 59
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.94 E-value=8.5e-27 Score=164.07 Aligned_cols=131 Identities=11% Similarity=0.146 Sum_probs=112.9
Q ss_pred CcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHH
Q 028944 44 KSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQE 123 (201)
Q Consensus 44 ~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~ 123 (201)
..+|+|++.+.+|+.+++.+++||++||.||++||++|+.+++.+++++++++ ++.+++|+.| ++.+.+++
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~~~ 72 (136)
T 1lu4_A 2 DERLQFTATTLSGAPFDGASLQGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP--AVTFVGIATR-------ADVGAMQS 72 (136)
T ss_dssp GGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHHHH
T ss_pred CCCCCeEeecCCCCeecHHHhCCCEEEEEEECCcChhHHHHHHHHHHHHHHCC--CcEEEEEEcC-------CCHHHHHH
Confidence 46899999999999999999999999999999999999999999999999997 7999999987 47899999
Q ss_pred HHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecC---CCCCchhhhhcccCC
Q 028944 124 VACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYA---PTTSPLKIEVGTTIP 200 (201)
Q Consensus 124 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~---g~~~~~~l~~~l~~l 200 (201)
|+++ ++++|+++ .|....... . +++.++|+++++|++|+++ ++. |..+.+++++.|+++
T Consensus 73 ~~~~-~~~~~~~~--~d~~~~~~~-~-------------~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~l 134 (136)
T 1lu4_A 73 FVSK-YNLNFTNL--NDADGVIWA-R-------------YNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAAL 134 (136)
T ss_dssp HHHH-HTCCSEEE--ECTTSHHHH-H-------------TTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC
T ss_pred HHHH-cCCCceEE--ECCchhHHH-h-------------cCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHH
Confidence 9965 69999988 444332221 1 2677789999999999999 888 988899999988876
Q ss_pred C
Q 028944 201 L 201 (201)
Q Consensus 201 l 201 (201)
|
T Consensus 135 l 135 (136)
T 1lu4_A 135 T 135 (136)
T ss_dssp -
T ss_pred h
Confidence 4
No 60
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=99.94 E-value=7.8e-27 Score=170.60 Aligned_cols=128 Identities=9% Similarity=0.055 Sum_probs=101.2
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
.|+.+|+|++.|.+|+.+++++++||++||+|| ++|||+|+.+++.|+++++++ ++++|++||.| +++.
T Consensus 19 ~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~v~vv~Is~d--------~~~~ 88 (165)
T 1q98_A 19 VGEIVENFILVGNDLADVALNDFASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL--SNTIVLCISAD--------LPFA 88 (165)
T ss_dssp TTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS--TTEEEEEEESS--------CHHH
T ss_pred CCCCCCCeEEECCCCCEEehHHhCCCeEEEEEECCCCCCccHHHHHHHHHHHHHc--CCCEEEEEeCC--------CHHH
Confidence 899999999999999999999999999999999 799999999999999999999 67999999976 7889
Q ss_pred HHHHHHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCC
Q 028944 121 IQEVACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAP 186 (201)
Q Consensus 121 ~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g 186 (201)
+++|++ ++++ +||++ .|.........|+..... .+.. + .+.|++||||++|+|++.+.|
T Consensus 89 ~~~~~~-~~~~~~~~~l--~D~~~~~~~~~~gv~~~~-~~~~--g-~~~p~~~liD~~G~i~~~~~~ 148 (165)
T 1q98_A 89 QARFCG-AEGIENAKTV--STFRNHALHSQLGVDIQT-GPLA--G-LTSRAVIVLDEQNNVLHSQLV 148 (165)
T ss_dssp HTTCTT-TTTCTTEEEE--ECTTCTHHHHHTTCEECS-STTT--T-SBCCEEEEECTTSBEEEEEEC
T ss_pred HHHHHH-HcCCCceEEe--eccccchHHHHhCceecc-cccC--C-ccceeEEEEcCCCEEEEEEeC
Confidence 999995 4699 79998 444112222222211000 0000 1 146999999999999999875
No 61
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.94 E-value=3.1e-27 Score=168.50 Aligned_cols=139 Identities=17% Similarity=0.180 Sum_probs=117.3
Q ss_pred CCCcccceEE--ecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDFTV--KDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f~l--~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.|+++|+|++ .+.+|+.+++++++||++||+||++||++|+.+++.+++++++++++ +.+++|++|.. .+.++.+
T Consensus 3 ~g~~~P~f~~~~~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~-~~~~~v~~~~~--~~~~~~~ 79 (148)
T 2b5x_A 3 LRQPMPELTGEKAWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQ-LNVVAVHMPRS--EDDLDPG 79 (148)
T ss_dssp TTCBCCCCCCCSEEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEECCCS--TTTSSHH
T ss_pred CCCCCCCCccccccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEEcCCC--ccccCHH
Confidence 6889999999 78999999999999999999999999999999999999999999887 99999998842 1223789
Q ss_pred HHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 120 EIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++++|+++ ++++||++ .|........ +++.++|+++++|++|+++.++.|..+.+++++.|++
T Consensus 80 ~~~~~~~~-~~~~~~~~--~d~~~~~~~~--------------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 142 (148)
T 2b5x_A 80 KIKETAAE-HDITQPIF--VDSDHALTDA--------------FENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNR 142 (148)
T ss_dssp HHHHHHHH-TTCCSCEE--ECSSCHHHHH--------------TCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHH
T ss_pred HHHHHHHH-cCCCcceE--ECCchhHHHH--------------hCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHH
Confidence 99999955 69999988 4443322211 2777889999999999999999998888888887765
Q ss_pred C
Q 028944 200 P 200 (201)
Q Consensus 200 l 200 (201)
+
T Consensus 143 ~ 143 (148)
T 2b5x_A 143 V 143 (148)
T ss_dssp H
T ss_pred H
Confidence 4
No 62
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.94 E-value=1e-26 Score=163.35 Aligned_cols=132 Identities=14% Similarity=0.109 Sum_probs=113.3
Q ss_pred CCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHH
Q 028944 43 PKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQ 122 (201)
Q Consensus 43 ~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 122 (201)
+..+|+|++.+.+|+.+++.+++||++||.||++||++|+.+++.+++++++++ ++.++.|+.| ++.+.++
T Consensus 2 ~~~~p~~~~~~~~g~~~~l~~~~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~-------~~~~~~~ 72 (136)
T 1zzo_A 2 VPAQLQFSAKTLDGHDFHGESLLGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP--EVTFVGVAGL-------DQVPAMQ 72 (136)
T ss_dssp CCGGGCCEEEBTTSCEEEGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECS-------SCHHHHH
T ss_pred CCCCCCcccccCCCCEeeHHHhCCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC--CeEEEEEeCC-------CCHHHHH
Confidence 567999999999999999999999999999999999999999999999999997 6999999987 4789999
Q ss_pred HHHHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 123 EVACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 123 ~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+|+++ +++ +|+++ .|...... .. +++.++|+++++|++|+++ ++.|..+.+++.+.|+++|
T Consensus 73 ~~~~~-~~~~~~~~~--~d~~~~~~-~~-------------~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 73 EFVNK-YPVKTFTQL--ADTDGSVW-AN-------------FGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp HHHHH-TTCTTSEEE--ECTTCHHH-HH-------------TTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred HHHHH-cCCCceEEE--EcCCcHHH-HH-------------cCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 99955 688 89988 44332222 11 2677789999999999999 8999988888888887654
No 63
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=99.94 E-value=3.7e-27 Score=179.28 Aligned_cols=133 Identities=13% Similarity=0.085 Sum_probs=110.9
Q ss_pred CCCcccceEEecC--CC--CeeecCCC-CCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCC
Q 028944 42 APKSIYDFTVKDI--RG--NDVSLSGY-RGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEP 115 (201)
Q Consensus 42 ~~~~~p~f~l~~~--~G--~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~ 115 (201)
.|+.+|+|++.+. +| +.++++++ +||++||+|| ++|||+|+.+++.|++++++|++++++||+|++|
T Consensus 23 ~G~~aP~f~l~~~~~~G~~~~v~l~d~~~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D------- 95 (213)
T 2i81_A 23 VGKEAPFFKAEAVFGDNSFGEVNLTQFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVD------- 95 (213)
T ss_dssp BTSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESS-------
T ss_pred CCCcCCCeEeeccccCCceeEEeHHHHcCCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCC-------
Confidence 8999999999998 89 89999999 9999999999 9999999999999999999999889999999987
Q ss_pred CCHHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCccccccc-----ccceEEEECCCCcEEEe
Q 028944 116 GSNEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIK-----WNFTKFLVNKEGKVVER 183 (201)
Q Consensus 116 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~P~~~lid~~G~i~~~ 183 (201)
+.+.+++|++ .+ +++||++ .|.++... +.| ++. .+|++||||++|+|++.
T Consensus 96 -~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~-~~y-------------gv~~~~g~~~p~~~lID~~G~i~~~ 157 (213)
T 2i81_A 96 -SKYTHLAWKK-TPLAKGGIGNIKHTLL--SDITKSIS-KDY-------------NVLFDDSVSLRAFVLIDMNGIVQHL 157 (213)
T ss_dssp -CHHHHHHHHS-SCGGGTCCCSCSSEEE--ECTTSHHH-HHT-------------TCEETTTEECEEEEEECTTSBEEEE
T ss_pred -CHHHHHHHHH-HHHhhCCccCCCceEE--ECCchHHH-HHh-------------CCccccCCcccEEEEECCCCEEEEE
Confidence 7889999994 45 7889988 45443222 222 444 67999999999999999
Q ss_pred cCCCCC----chhhhhcccC
Q 028944 184 YAPTTS----PLKIEVGTTI 199 (201)
Q Consensus 184 ~~g~~~----~~~l~~~l~~ 199 (201)
+.|..+ .+++.+.|++
T Consensus 158 ~~~~~~~~~~~~ell~~l~~ 177 (213)
T 2i81_A 158 LVNNLAIGRSVDEILRIIDA 177 (213)
T ss_dssp EEECTTCCCCHHHHHHHHHH
T ss_pred EecCCCCCCCHHHHHHHHHH
Confidence 866543 5666666654
No 64
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.94 E-value=4.3e-27 Score=178.68 Aligned_cols=140 Identities=13% Similarity=0.080 Sum_probs=108.9
Q ss_pred cCCCcccceEEecC---CCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCC
Q 028944 41 EAPKSIYDFTVKDI---RGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPG 116 (201)
Q Consensus 41 ~~~~~~p~f~l~~~---~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~ 116 (201)
..|+.+|+|++.+. +|+.+++++++||++||+|| ++|||+|+.+++.|++++++|+++|++||+||.|
T Consensus 20 ~~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D-------- 91 (211)
T 2pn8_A 20 FQSMPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD-------- 91 (211)
T ss_dssp CSSCBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS--------
T ss_pred CCCCcCCCeEeecccCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 38999999999974 46899999999999999999 9999999999999999999999889999999986
Q ss_pred CHHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC-
Q 028944 117 SNEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT- 188 (201)
Q Consensus 117 ~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~- 188 (201)
+++.+++|++ .+ +++||++ .|..+... ..|+..... .| ..+|++||||++|+|++.+.|..
T Consensus 92 ~~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~~~-~~ygv~~~~----~g---~~~p~~~lID~~G~I~~~~~g~~~ 160 (211)
T 2pn8_A 92 SQFTHLAWIN-TPRRQGGLGPIRIPLL--SDLTHQIS-KDYGVYLED----SG---HTLRGLFIIDDKGILRQITLNDLP 160 (211)
T ss_dssp CHHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTSHHH-HHTTCEETT----TT---EECEEEEEECTTSBEEEEEEECTT
T ss_pred CHHHHHHHHH-HhhhccCccCCceEEE--ECCchHHH-HHcCCcccC----CC---cccceEEEECCCCEEEEEEecCCC
Confidence 7889999994 45 6789988 45443222 222211000 00 24699999999999999986654
Q ss_pred ---CchhhhhcccC
Q 028944 189 ---SPLKIEVGTTI 199 (201)
Q Consensus 189 ---~~~~l~~~l~~ 199 (201)
+.+++.+.|++
T Consensus 161 ~~~~~~ell~~l~~ 174 (211)
T 2pn8_A 161 VGRSVDETLRLVQA 174 (211)
T ss_dssp BCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHH
Confidence 33556665543
No 65
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=99.94 E-value=9.4e-27 Score=175.56 Aligned_cols=133 Identities=14% Similarity=0.130 Sum_probs=110.4
Q ss_pred CCCcccceEEecC--CC--CeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCC
Q 028944 42 APKSIYDFTVKDI--RG--NDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPG 116 (201)
Q Consensus 42 ~~~~~p~f~l~~~--~G--~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~ 116 (201)
.|+.+|+|++.+. +| +.+++++++||++||+|| ++|||+|+.+++.|++++++|++++++|++|+.|
T Consensus 8 ~G~~aP~f~l~~~~~~g~~~~v~l~~~~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D-------- 79 (202)
T 1uul_A 8 DLHPAPDFNETALMPNGTFKKVALTSYKGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMD-------- 79 (202)
T ss_dssp TTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS--------
T ss_pred CCCcCCCcEeeeeecCCCccEEEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCC--------
Confidence 7999999999997 78 899999999999999999 9999999999999999999999889999999987
Q ss_pred CHHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCccccccc------ccceEEEECCCCcEEEe
Q 028944 117 SNEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIK------WNFTKFLVNKEGKVVER 183 (201)
Q Consensus 117 ~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~i~~~ 183 (201)
+.+.+++|+++ + +++||++ .|..+... ..| ++. ++|++||||++|+|+++
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~~~p~l--~D~~~~~~-~~y-------------gv~~~~~g~~~P~~~lid~~G~i~~~ 142 (202)
T 1uul_A 80 SEYSHLAWTSI-ERKRGGLGQMNIPIL--ADKTKCIM-KSY-------------GVLKEEDGVAYRGLFIIDPKQNLRQI 142 (202)
T ss_dssp CHHHHHHHHHS-CGGGTCCCSCSSCEE--ECTTCHHH-HHH-------------TCEETTTTEECEEEEEECTTSBEEEE
T ss_pred CHHHHHHHHHH-HHhhCCCCCCceeEE--ECCchHHH-HHc-------------CCccCCCCceeeEEEEECCCCEEEEE
Confidence 78899999954 5 7889988 45433222 223 333 67999999999999999
Q ss_pred cCCCCC----chhhhhcccC
Q 028944 184 YAPTTS----PLKIEVGTTI 199 (201)
Q Consensus 184 ~~g~~~----~~~l~~~l~~ 199 (201)
+.|..+ .+++.+.|++
T Consensus 143 ~~g~~~~~~~~~ell~~l~~ 162 (202)
T 1uul_A 143 TVNDLPVGRDVDEALRLVKA 162 (202)
T ss_dssp EEECTTBCCCHHHHHHHHHH
T ss_pred EeCCCCCCCCHHHHHHHHHH
Confidence 877654 3566666554
No 66
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.94 E-value=3.4e-26 Score=160.66 Aligned_cols=136 Identities=19% Similarity=0.266 Sum_probs=113.1
Q ss_pred cccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHH
Q 028944 45 SIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEV 124 (201)
Q Consensus 45 ~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~ 124 (201)
++|+|++.+.+|+.+++++++||++||+||++||++|+.+++.+++++++++ .++.+++|+.+.. ...++.+.+++|
T Consensus 1 ~~p~f~l~~~~g~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~v~i~~~~~--~~~~~~~~~~~~ 77 (138)
T 4evm_A 1 EVADFELMGVDGKTYRLSDYKGKKVYLKFWASWCSICLASLPDTDEIAKEAG-DDYVVLTVVSPGH--KGEQSEADFKNW 77 (138)
T ss_dssp CCCCCEEEBTTSCEEEGGGGTTSEEEEEECCTTCHHHHHHHHHHHHHHHTCT-TTEEEEEEECTTS--TTCCCHHHHHHH
T ss_pred CCCcceeECCCCCEEEHHHhCCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC-CCcEEEEEEcCCC--CchhhHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999964 4699999964322 234689999999
Q ss_pred HHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 125 ACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 125 ~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++ ++. +|+++ .|.++... .. +++.++|+++|+|++|++++++.|..+.+++.+.|+++
T Consensus 78 ~~~-~~~~~~~~~--~d~~~~~~-~~-------------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 78 YKG-LDYKNLPVL--VDPSGKLL-ET-------------YGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp HTT-CCCTTCCEE--ECTTCHHH-HH-------------TTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred Hhh-cCCCCeeEE--ECcchHHH-HH-------------cCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 955 688 89988 44443222 11 36777899999999999999999999999999888764
No 67
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=99.94 E-value=7.4e-27 Score=174.69 Aligned_cols=133 Identities=16% Similarity=0.117 Sum_probs=109.5
Q ss_pred CCCcccceEEecC--CC--CeeecCCC-CCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCC
Q 028944 42 APKSIYDFTVKDI--RG--NDVSLSGY-RGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEP 115 (201)
Q Consensus 42 ~~~~~p~f~l~~~--~G--~~~~l~~~-~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~ 115 (201)
.|+.+|+|++.+. +| +.++++++ +||++||+|| ++|||+|+.+++.|++++++|++++++|++|+.|
T Consensus 2 ~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d------- 74 (192)
T 2h01_A 2 FQGQAPSFKAEAVFGDNTFGEVSLSDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVD------- 74 (192)
T ss_dssp CSSBCCCCEEEEECTTSCEEEEEGGGGTTTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESS-------
T ss_pred CCCcCCCcEeEeeecCCceeEEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeC-------
Confidence 6889999999999 99 89999999 9999999999 9999999999999999999998889999999987
Q ss_pred CCHHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCccccccc-----ccceEEEECCCCcEEEe
Q 028944 116 GSNEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIK-----WNFTKFLVNKEGKVVER 183 (201)
Q Consensus 116 ~~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-----~~P~~~lid~~G~i~~~ 183 (201)
+.+.+++|++ .+ +++||++ .|.++... ..| ++. .+|++||||++|+|++.
T Consensus 75 -~~~~~~~~~~-~~~~~~~~~~~~~~~l--~D~~~~~~-~~~-------------gv~~~~g~~~P~~~liD~~G~i~~~ 136 (192)
T 2h01_A 75 -SKFTHLAWKK-TPLSQGGIGNIKHTLI--SDISKSIA-RSY-------------DVLFNESVALRAFVLIDKQGVVQHL 136 (192)
T ss_dssp -CHHHHHHHHT-SCGGGTCCCSCSSEEE--ECTTSHHH-HHT-------------TCEETTTEECCEEEEECTTSBEEEE
T ss_pred -CHHHHHHHHH-hHHhhCCccCCCcCeE--ECCcHHHH-HHh-------------CCcCcCCceeeEEEEEcCCCEEEEE
Confidence 7889999995 45 7789988 44433222 222 444 67999999999999999
Q ss_pred cCCCCC----chhhhhcccC
Q 028944 184 YAPTTS----PLKIEVGTTI 199 (201)
Q Consensus 184 ~~g~~~----~~~l~~~l~~ 199 (201)
+.|..+ .+++.+.|++
T Consensus 137 ~~g~~~~~~~~~~l~~~l~~ 156 (192)
T 2h01_A 137 LVNNLALGRSVDEILRLIDA 156 (192)
T ss_dssp EEGGGSSGGGHHHHHHHHHH
T ss_pred EeCCCCCCCCHHHHHHHHHH
Confidence 877543 4455555543
No 68
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.94 E-value=5.7e-27 Score=168.79 Aligned_cols=136 Identities=17% Similarity=0.205 Sum_probs=115.6
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.|+.+|+|++.+.+|+.+++++++ |++||+||++||++|+.+++.|.++++++ ++.+++|+.|. .++.+.+
T Consensus 7 ~g~~~p~f~l~~~~g~~~~l~~~~-k~vll~f~~~~C~~C~~~~~~l~~l~~~~---~v~~v~v~~d~-----~~~~~~~ 77 (154)
T 3ia1_A 7 PGEPLPDFLLLDPKGQPVTPATVS-KPAVIVFWASWCTVCKAEFPGLHRVAEET---GVPFYVISREP-----RDTREVV 77 (154)
T ss_dssp SBEECCCCCEECTTSCEECTTTSC-SSEEEEEECTTCHHHHHHHHHHHHHHHHH---CCCEEEEECCT-----TCCHHHH
T ss_pred CCCcCCceEEECCCCCEechHHcC-CeEEEEEEcccChhHHHHHHHHHHHHHHc---CCeEEEEeCCC-----cccHHHH
Confidence 789999999999999999999999 99999999999999999999999999999 69999999852 4689999
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|++ .++++||++ .|.. .....+... +++..+|++||||++|+++.++.|..+.+++++.|+++
T Consensus 78 ~~~~~-~~~~~~~~~--~d~~-~~~~~~~~~----------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 142 (154)
T 3ia1_A 78 LEYMK-TYPRFIPLL--ASDR-DRPHEVAAR----------FKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLA 142 (154)
T ss_dssp HHHHT-TCTTEEECB--CCSS-CCHHHHHTT----------SSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHT
T ss_pred HHHHH-HcCCCcccc--cccc-cchHHHHHH----------hCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhc
Confidence 99995 469999988 3311 111222211 37778899999999999999999999999999888765
No 69
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.94 E-value=4.1e-27 Score=190.95 Aligned_cols=141 Identities=17% Similarity=0.179 Sum_probs=120.0
Q ss_pred cCCCcccceE-----EecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCC
Q 028944 41 EAPKSIYDFT-----VKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEP 115 (201)
Q Consensus 41 ~~~~~~p~f~-----l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~ 115 (201)
..|..+|+|+ +.+.+|+.+++++++||++||+||++||++|+.++|.|++++++|+++++.|++|++|.+ +.+
T Consensus 52 ~vG~~aPdF~~~~~wL~d~dG~~vsLsdl~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~--~~~ 129 (352)
T 2hyx_A 52 ESCGTAPDLKGITGWLNTPGNKPIDLKSLRGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEY--AFE 129 (352)
T ss_dssp CCCCBCCCCCSCCEEESSGGGCCCCGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSS--GGG
T ss_pred CCCCcCCCccccccccCCCCCCEEcHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcc--ccc
Confidence 3789999999 999999999999999999999999999999999999999999999988899999998732 123
Q ss_pred CCHHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhh
Q 028944 116 GSNEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEV 195 (201)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~ 195 (201)
++++++++|+++ ++++||++ .|.+...... +++.++|++||||++|++++++.|..+.+++++
T Consensus 130 d~~~~~~~~~~~-~~l~fpv~--~D~~~~l~~~--------------ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~ 192 (352)
T 2hyx_A 130 KVPGNVAKGAAN-LGISYPIA--LDNNYATWTN--------------YRNRYWPAEYLIDATGTVRHIKFGEGDYNVTET 192 (352)
T ss_dssp GCHHHHHHHHHH-HTCCSCEE--ECTTSHHHHH--------------TTCCEESEEEEECTTSBEEEEEESBCCHHHHHH
T ss_pred CCHHHHHHHHHH-cCCCccEE--eCCcHHHHHH--------------cCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHH
Confidence 589999999955 69999988 4443322211 367788999999999999999999888888888
Q ss_pred cccCC
Q 028944 196 GTTIP 200 (201)
Q Consensus 196 ~l~~l 200 (201)
.|+++
T Consensus 193 ~I~~l 197 (352)
T 2hyx_A 193 LVRQL 197 (352)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77654
No 70
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=99.93 E-value=4.9e-27 Score=170.49 Aligned_cols=122 Identities=11% Similarity=0.148 Sum_probs=102.8
Q ss_pred CCCcccceEEecCCCCeeecCCCCCc--EEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGK--VLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSN 118 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk--~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~ 118 (201)
.|+.+|+|++.|.+|+.+++++++|| ++||+|| ++|||+|+.+++.|+++++++++++ +|++|+.| ++
T Consensus 9 ~G~~~P~f~l~~~~G~~v~l~~~~gk~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~-~vv~is~d--------~~ 79 (159)
T 2a4v_A 9 IGDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYA-AVFGLSAD--------SV 79 (159)
T ss_dssp TTCBCCSCEEECTTSCEEEHHHHHHHCSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTC-EEEEEESC--------CH
T ss_pred CCCCCCCeEEECCCCCEEeHHHHhCCCCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCC-cEEEEeCC--------CH
Confidence 89999999999999999999999887 8999987 8999999999999999999999989 99999976 78
Q ss_pred HHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccc------cceEEEECCCCcEEEecCCCCCc
Q 028944 119 EEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKW------NFTKFLVNKEGKVVERYAPTTSP 190 (201)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~------~P~~~lid~~G~i~~~~~g~~~~ 190 (201)
+.+++|+++ ++++||++ .|.++... ..| ++.. .|++||| ++|+|++.+.|..+.
T Consensus 80 ~~~~~~~~~-~~~~~~~l--~D~~~~~~-~~~-------------gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~~ 139 (159)
T 2a4v_A 80 TSQKKFQSK-QNLPYHLL--SDPKREFI-GLL-------------GAKKTPLSGSIRSHFIF-VDGKLKFKRVKISPE 139 (159)
T ss_dssp HHHHHHHHH-HTCSSEEE--ECTTCHHH-HHH-------------TCBSSSSSCBCCEEEEE-ETTEEEEEEESCCHH
T ss_pred HHHHHHHHH-hCCCceEE--ECCccHHH-HHh-------------CCcccccCCccceEEEE-cCCEEEEEEccCCcc
Confidence 899999965 69999999 45443322 223 2333 3489999 999999999887644
No 71
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.93 E-value=1.6e-26 Score=168.88 Aligned_cols=133 Identities=16% Similarity=0.132 Sum_probs=110.6
Q ss_pred cCCCcccceEEecC--CCCeeecCCC-CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 41 EAPKSIYDFTVKDI--RGNDVSLSGY-RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 41 ~~~~~~p~f~l~~~--~G~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
..|+.+|+|++.+. +|+.++++++ +||++||+||++|||+|+.++|.|++++++ ++.+++|+.| ++
T Consensus 23 ~~G~~~P~f~l~~~~~~g~~~~~~~~~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~----~v~vv~v~~~-------~~ 91 (168)
T 2b1k_A 23 LIGKPVPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ----GIRVVGMNYK-------DD 91 (168)
T ss_dssp TTTSBCCCCEEEESSSTTCEEEGGGGCCSSCEEEEEECTTCHHHHHHHHHHHHHHHT----TCCEEEEEES-------CC
T ss_pred ccCCcCCCeEeecccCCCcEeehhHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHC----CCEEEEEECC-------CC
Confidence 48999999999999 9999999885 899999999999999999999999999876 6999999987 47
Q ss_pred HHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcc
Q 028944 118 NEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGT 197 (201)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 197 (201)
.+.+++|+++ ++++|+... .|...... .. +++.++|++|+||++|++++++.|..+.+.+.+.|
T Consensus 92 ~~~~~~~~~~-~~~~~~~~~-~d~~~~~~-~~-------------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l 155 (168)
T 2b1k_A 92 RQKAISWLKE-LGNPYALSL-FDGDGMLG-LD-------------LGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEI 155 (168)
T ss_dssp HHHHHHHHHH-HCCCCSEEE-EETTCHHH-HH-------------HTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTT
T ss_pred hHHHHHHHHH-cCCCCceee-ECcchHHH-HH-------------cCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHH
Confidence 8999999955 699998531 34332221 11 26777899999999999999999998888888877
Q ss_pred cCC
Q 028944 198 TIP 200 (201)
Q Consensus 198 ~~l 200 (201)
+++
T Consensus 156 ~~~ 158 (168)
T 2b1k_A 156 KPL 158 (168)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 72
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=99.93 E-value=2.1e-26 Score=172.93 Aligned_cols=132 Identities=16% Similarity=0.167 Sum_probs=109.0
Q ss_pred CCCcccceEEecC-CC--CeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 42 APKSIYDFTVKDI-RG--NDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 42 ~~~~~p~f~l~~~-~G--~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
.|+.+|+|++.+. +| +.+++++++||++||+|| ++||++|+.+++.|++++++|++++++|++|++| +
T Consensus 7 ~G~~aP~f~l~~~~~g~~~~v~l~~~~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d--------~ 78 (197)
T 1qmv_A 7 IGKPAPDFKATAVVDGAFKEVKLSDYKGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVD--------S 78 (197)
T ss_dssp TTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESS--------C
T ss_pred CCCCCCCeEeEeecCCCccEEEHHHHCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC--------C
Confidence 7999999999998 88 999999999999999999 9999999999999999999999889999999987 6
Q ss_pred HHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCccccccc------ccceEEEECCCCcEEEec
Q 028944 118 NEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIK------WNFTKFLVNKEGKVVERY 184 (201)
Q Consensus 118 ~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~i~~~~ 184 (201)
.+.+++|++ .+ +++||++ .|..+... ..| ++. .+|++||||++|+|++.+
T Consensus 79 ~~~~~~~~~-~~~~~~~~~~~~~p~l--~D~~~~~~-~~~-------------gv~~~~~~~~~P~~~lid~~G~i~~~~ 141 (197)
T 1qmv_A 79 QFTHLAWIN-TPRKEGGLGPLNIPLL--ADVTRRLS-EDY-------------GVLKTDEGIAYRGLFIIDGKGVLRQIT 141 (197)
T ss_dssp HHHHHHHHT-SCGGGTCCCSCSSCEE--ECTTCHHH-HHT-------------TCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred HHHHHHHHH-HHHhhCCCCCCceEEE--ECCcHHHH-HHc-------------CCccCCCCceeeEEEEECCCCcEEEEE
Confidence 788999984 45 7889988 45443322 222 333 569999999999999998
Q ss_pred CCCCC----chhhhhccc
Q 028944 185 APTTS----PLKIEVGTT 198 (201)
Q Consensus 185 ~g~~~----~~~l~~~l~ 198 (201)
.|..+ .+++.+.|+
T Consensus 142 ~g~~~~~~~~~e~l~~l~ 159 (197)
T 1qmv_A 142 VNDLPVGRSVDEALRLVQ 159 (197)
T ss_dssp EECTTBCCCHHHHHHHHH
T ss_pred eCCCCCCCCHHHHHHHHH
Confidence 77653 355555554
No 73
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=99.93 E-value=1.3e-26 Score=169.00 Aligned_cols=131 Identities=13% Similarity=0.083 Sum_probs=104.1
Q ss_pred CCCcccceEEe--cCCC--CeeecCC-CCCcEEEEEEe-ecCCCCcH-HhHHHHHHHHHHhcCCCeE-EEEeecCCCCCC
Q 028944 42 APKSIYDFTVK--DIRG--NDVSLSG-YRGKVLLVVNV-ASKCGLTQ-SNYKELNVLYEKYKNQDFE-VLAFPCNQFAGQ 113 (201)
Q Consensus 42 ~~~~~p~f~l~--~~~G--~~~~l~~-~~gk~~lv~f~-~~~C~~C~-~~~~~l~~~~~~~~~~~~~-vv~vs~d~~~~~ 113 (201)
.|+.+|+|++. |.+| +.+++++ ++||++||+|| ++|||+|+ .+++.|++++++++++|++ |++||.|
T Consensus 6 ~G~~aP~f~l~~~~~~G~~~~~~l~~~~~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d----- 80 (162)
T 1tp9_A 6 VGDVLPDGKLAYFDEQDQLQEVSVHSLVAGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVN----- 80 (162)
T ss_dssp TTCBCCCCEEEEECTTSCEEEEESHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESS-----
T ss_pred CCCCCCCeEEEeecCCCCceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC-----
Confidence 79999999986 8999 9999999 89999999999 89999999 9999999999999988999 9999976
Q ss_pred CCCCHHHHHHHHHhhcCc--ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCC
Q 028944 114 EPGSNEEIQEVACTMFKA--EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPT 187 (201)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~ 187 (201)
+++.+++|+++ +++ +||++ .|.++... +.|+..... +..|.++.+.|++|||| +|+|++.+.|.
T Consensus 81 ---~~~~~~~~~~~-~~~~~~~~~l--~D~~~~~~-~~~gv~~~~--~~~g~~~~~~p~~~vid-~G~i~~~~~~~ 146 (162)
T 1tp9_A 81 ---DPFVMKAWAKS-YPENKHVKFL--ADGSATYT-HALGLELDL--QEKGLGTRSRRFALLVD-DLKVKAANIEG 146 (162)
T ss_dssp ---CHHHHHHHHHT-CTTCSSEEEE--ECTTSHHH-HHTTCEEEE--TTTTSEEEECCEEEEEE-TTEEEEEEECS
T ss_pred ---CHHHHHHHHHh-cCCCCCeEEE--ECCCchHH-HHcCccccc--ccCCCCccceeEEEEEE-CCEEEEEEeeC
Confidence 78999999955 688 89998 55543332 223221000 00011223579999999 99999998776
No 74
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=99.93 E-value=1.4e-26 Score=174.42 Aligned_cols=129 Identities=13% Similarity=0.127 Sum_probs=102.5
Q ss_pred cCCCcccceEEecCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHH
Q 028944 41 EAPKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 41 ~~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
..|+.+|+|++.|.+|+.+++++++||++||+|| ++||++|+.+++.|++++++| +|++|++||.| +++
T Consensus 53 ~~G~~aPdf~l~d~~G~~v~L~d~~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~--~~v~vv~Is~D--------~~~ 122 (200)
T 3zrd_A 53 QIGDKAKDFTLVAKDLSDVALSSFAGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL--ENTVVLCISSD--------LPF 122 (200)
T ss_dssp CTTCBCCCCEEECTTSCEEEGGGGTTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS--TTEEEEEEESS--------CHH
T ss_pred CCCCCCCCeEEECCCCCEEcHHHhCCCcEEEEEECCCCCchhHHHHHHHHHHHHHh--CCCEEEEEECC--------CHH
Confidence 3899999999999999999999999999999999 679999999999999999999 67999999976 789
Q ss_pred HHHHHHHhhcCc-ccceeeeecc-CCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCC
Q 028944 120 EIQEVACTMFKA-EFPIFDKIDV-NGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPT 187 (201)
Q Consensus 120 ~~~~~~~~~~~~-~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~ 187 (201)
.+++|++ .+++ +||++ .|. ++.. ...|+...... +. .++ +.|++||||++|+|++.+.+.
T Consensus 123 ~~~~~~~-~~~~~~f~~l--~D~~~~~~-~~~ygv~~~~~-~~--~g~-~~p~~~lID~~G~I~~~~~~~ 184 (200)
T 3zrd_A 123 AQSRFCG-AEGLSNVITL--STLRGADF-KQAYGVAITEG-PL--AGL-TARAVVVLDGQDNVIYSELVN 184 (200)
T ss_dssp HHTTCTT-TTTCTTEEEE--ETTSCTHH-HHHTTCEECSS-TT--TTS-BCCEEEEECTTSBEEEEEECS
T ss_pred HHHHHHH-HcCCCCceEE--ecCchHHH-HHHhCceeecc-cC--CCc-cccEEEEECCCCeEEEEEecC
Confidence 9999995 4699 99988 555 3322 23332211000 00 011 569999999999999987544
No 75
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=99.93 E-value=1.1e-26 Score=177.69 Aligned_cols=125 Identities=12% Similarity=0.164 Sum_probs=104.2
Q ss_pred cCCCcccceEEecC---CCCeeecCCCCCcEEEEEEee-cCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCC
Q 028944 41 EAPKSIYDFTVKDI---RGNDVSLSGYRGKVLLVVNVA-SKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPG 116 (201)
Q Consensus 41 ~~~~~~p~f~l~~~---~G~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~ 116 (201)
..|+.+|+|++.+. +|+.+++++++||++||+||+ +||++|+.+++.|++++++|+++|++||+|++|
T Consensus 41 ~~G~~aP~f~l~~~~d~~G~~v~l~~~~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D-------- 112 (222)
T 3ztl_A 41 LPNRPAPEFKGQAVINGEFKEICLKDYRGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTD-------- 112 (222)
T ss_dssp CSSEECCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESS--------
T ss_pred cCCCCCCCeEEecccCCCCcEEeHHHhCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 38999999999955 559999999999999999996 999999999999999999999889999999987
Q ss_pred CHHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCccccccc------ccceEEEECCCCcEEEe
Q 028944 117 SNEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIK------WNFTKFLVNKEGKVVER 183 (201)
Q Consensus 117 ~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~i~~~ 183 (201)
+.++.++|.+. + +.+|+++ .|.++... ..| ++. .+|++||||++|+|++.
T Consensus 113 ~~~~~~~~~~~-~~~~~~~~~~~~~~l--~D~~~~~~-~~y-------------gv~~~~~g~~~P~~~lID~~G~I~~~ 175 (222)
T 3ztl_A 113 SQYSHLAWDNL-DRKSGGLGHMKIPLL--ADRKQEIS-KAY-------------GVFDEEDGNAFRGLFIIDPNGILRQI 175 (222)
T ss_dssp CHHHHHHHHHS-CGGGTSCCSCSSCEE--ECSSSHHH-HHT-------------TCBCTTTSSBCEEEEEECTTSEEEEE
T ss_pred CHHHHHHHHHH-hhhhccccccceeEE--eCCchHHH-HHc-------------CCeecCCCCccceEEEECCCCeEEEE
Confidence 78888899853 4 8889998 45443222 222 333 56999999999999999
Q ss_pred cCCCCCc
Q 028944 184 YAPTTSP 190 (201)
Q Consensus 184 ~~g~~~~ 190 (201)
+.|..+.
T Consensus 176 ~~g~~~~ 182 (222)
T 3ztl_A 176 TINDKPV 182 (222)
T ss_dssp EEECTTB
T ss_pred EecCCCC
Confidence 8776544
No 76
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.93 E-value=3.6e-26 Score=165.64 Aligned_cols=132 Identities=20% Similarity=0.264 Sum_probs=109.7
Q ss_pred cCCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 41 EAPKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 41 ~~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
..|+.+|+|++.+.+|+.+++++++||++||+||++||++|+.+++.|.++++++++.++.+++|+.|. +
T Consensus 16 ~~G~~~p~f~l~~~~g~~~~l~~~~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~----------~ 85 (158)
T 3hdc_A 16 RTGALAPNFKLPTLSGENKSLAQYRGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEK----------R 85 (158)
T ss_dssp CTTSBCCCCEEECTTSCEEESGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSS----------S
T ss_pred CCCCcCCCceeEcCCCCEEehHHhCCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCH----------H
Confidence 489999999999999999999999999999999999999999999999999999998889999999872 4
Q ss_pred HHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCc--hhhhhccc
Q 028944 121 IQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSP--LKIEVGTT 198 (201)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~--~~l~~~l~ 198 (201)
+++|++ .++.+|+++ .|..+... .. +++..+|++||||++|++++++.|..+. +++.+.++
T Consensus 86 ~~~~~~-~~~~~~~~~--~d~~~~~~-~~-------------~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~ 148 (158)
T 3hdc_A 86 FPEKYR-RAPVSFNFL--SDATGQVQ-QR-------------YGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLK 148 (158)
T ss_dssp CCGGGG-GCCCSCEEE--ECTTSHHH-HH-------------TTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHH
T ss_pred HHHHHH-HcCCCceEE--ECchHHHH-HH-------------hCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHH
Confidence 677774 469999988 44443222 11 3677889999999999999999988754 34555544
Q ss_pred C
Q 028944 199 I 199 (201)
Q Consensus 199 ~ 199 (201)
+
T Consensus 149 ~ 149 (158)
T 3hdc_A 149 S 149 (158)
T ss_dssp T
T ss_pred h
Confidence 3
No 77
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=99.93 E-value=4.5e-26 Score=174.13 Aligned_cols=133 Identities=11% Similarity=0.061 Sum_probs=108.8
Q ss_pred CCCcccceEEec---CCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 42 APKSIYDFTVKD---IRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 42 ~~~~~p~f~l~~---~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
.|+.+|+|++.+ .+|+.+++++++||++||+|| ++|||+|+.+++.|++++++|++++++||+|+.| +
T Consensus 29 ~G~~aP~f~l~~~~~~~g~~v~l~d~~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D--------~ 100 (220)
T 1zye_A 29 VTQHAPYFKGTAVVSGEFKEISLDDFKGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD--------S 100 (220)
T ss_dssp TTSBCCCCEEEEECSSSEEEEEGGGGTTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS--------C
T ss_pred CCCCCCCcEEEeeeCCCCcEEEHHHhCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC--------C
Confidence 899999999984 578999999999999999999 9999999999999999999999889999999987 6
Q ss_pred HHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCccccccc------ccceEEEECCCCcEEEec
Q 028944 118 NEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIK------WNFTKFLVNKEGKVVERY 184 (201)
Q Consensus 118 ~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~------~~P~~~lid~~G~i~~~~ 184 (201)
.+.+++|++ .+ +++||++ .|.++... ..| ++. .+|++||||++|+|++.+
T Consensus 101 ~~~~~~~~~-~~~~~~g~~~~~fp~l--~D~~~~i~-~~y-------------gv~~~~~g~~~P~~~liD~~G~I~~~~ 163 (220)
T 1zye_A 101 HFSHLAWIN-TPRKNGGLGHMNIALL--SDLTKQIS-RDY-------------GVLLEGPGLALRGLFIIDPNGVIKHLS 163 (220)
T ss_dssp HHHHHHHHT-SCGGGTCCCSCSSEEE--ECTTSHHH-HHT-------------TCEETTTTEECEEEEEECTTSBEEEEE
T ss_pred HHHHHHHHH-HHHHhCCCcCCceEEE--ECCcHHHH-HHh-------------CCeecCCCcccceEEEECCCCEEEEEE
Confidence 788999984 45 7789988 45433222 222 444 679999999999999988
Q ss_pred CCCCC----chhhhhcccC
Q 028944 185 APTTS----PLKIEVGTTI 199 (201)
Q Consensus 185 ~g~~~----~~~l~~~l~~ 199 (201)
.|..+ .+++.+.|++
T Consensus 164 ~g~~~~~~~~~ell~~l~~ 182 (220)
T 1zye_A 164 VNDLPVGRSVEETLRLVKA 182 (220)
T ss_dssp EECTTCCCCHHHHHHHHHH
T ss_pred ecCCCCCCCHHHHHHHHHH
Confidence 77643 3566665543
No 78
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=99.93 E-value=9e-27 Score=170.27 Aligned_cols=138 Identities=17% Similarity=0.127 Sum_probs=107.4
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecC-CCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASK-CGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~-C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||++| |++|+.+++.|+++++++ .++++++|+.| +++.
T Consensus 20 ~G~~~p~f~l~~~~G~~~~l~~~~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~--~~~~vv~is~d--------~~~~ 89 (167)
T 2jsy_A 20 VGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL--GDVNVYTISAD--------LPFA 89 (167)
T ss_dssp TTSCCCCCEEEBTTCCEEEHHHHTTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH--SSCEEEEEECS--------SGGG
T ss_pred CCCcCCceEEECCCCCEeeHHHhCCCeEEEEEecCCCCCchHHHHHHHHHHHHHc--CCCEEEEEECC--------CHHH
Confidence 899999999999999999999999999999999999 999999999999999999 57999999987 6678
Q ss_pred HHHHHHhhcCc-ccceeeeec-cCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC-----Cchhh
Q 028944 121 IQEVACTMFKA-EFPIFDKID-VNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT-----SPLKI 193 (201)
Q Consensus 121 ~~~~~~~~~~~-~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~-----~~~~l 193 (201)
+++|+++ ++. +||++ .| .++... ..|+..... .++ ..|++||||++|+|++++.|.. +.+++
T Consensus 90 ~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~~~v~~~~------~g~-~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l 158 (167)
T 2jsy_A 90 QARWCGA-NGIDKVETL--SDHRDMSFG-EAFGVYIKE------LRL-LARSVFVLDENGKVVYAEYVSEATNHPNYEKP 158 (167)
T ss_dssp TSCCGGG-SSCTTEEEE--EGGGTCHHH-HHTTCBBTT------TCS-BCCEEEEECTTSCEEEEEECSBTTSCCCSHHH
T ss_pred HHHHHHh-cCCCCceEe--eCCchhHHH-HHhCCcccc------CCc-eeeEEEEEcCCCcEEEEEecCCcCCCCCHHHH
Confidence 8899854 699 89988 45 333222 222110000 011 2499999999999999986532 33567
Q ss_pred hhcccCC
Q 028944 194 EVGTTIP 200 (201)
Q Consensus 194 ~~~l~~l 200 (201)
.+.|+++
T Consensus 159 ~~~l~~l 165 (167)
T 2jsy_A 159 IEAAKAL 165 (167)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7766654
No 79
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.93 E-value=2.2e-26 Score=167.32 Aligned_cols=138 Identities=18% Similarity=0.139 Sum_probs=113.1
Q ss_pred CCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHH
Q 028944 43 PKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQ 122 (201)
Q Consensus 43 ~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 122 (201)
++.+| ++.|.+|+.+++.+++||++||+||++||++|+.++|.|++++++|+.+++.|++|++|.. ++.++.+.++
T Consensus 17 ~~~~p--~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~--~~~~~~~~~~ 92 (164)
T 2h30_A 17 PHTMS--TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGF--LHEKKDGEFQ 92 (164)
T ss_dssp HHHHT--TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTS--TTCCCTTHHH
T ss_pred CCcCC--ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCC--ccccCHHHHH
Confidence 34445 7899999999999999999999999999999999999999999999888999999998743 3345788999
Q ss_pred HHHHhhcCcc-cceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 123 EVACTMFKAE-FPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 123 ~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+|+++ +++. +++. .|...... .. +++.++|+++|||++|+++.++.|..+.+++.+.|++++
T Consensus 93 ~~~~~-~~~~~~~~~--~d~~~~~~-~~-------------~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 93 KWYAG-LNYPKLPVV--TDNGGTIA-QN-------------LNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp HHHTT-SCCTTSCEE--ECTTCHHH-HH-------------TTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTT
T ss_pred HHHHh-CCCCcceEE--EcCchHHH-HH-------------cCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 99854 5776 7766 44333222 11 267788999999999999999999988888888887764
No 80
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=99.93 E-value=4.7e-26 Score=168.03 Aligned_cols=138 Identities=11% Similarity=0.039 Sum_probs=101.3
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecC-CCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASK-CGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEE 120 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~-C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~ 120 (201)
.|+.+|+|++.|.+|+.+++++++||++||+||++| |++|+.++|.|++++++ ++++|++|+.| +++.
T Consensus 20 ~G~~~P~f~l~~~~G~~v~l~~~~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~---~~v~vv~Is~D--------~~~~ 88 (175)
T 1xvq_A 20 VGSPAPAFTLTGGDLGVISSDQFRGKSVLLNIFPSVDTPVCATSVRTFDERAAA---SGATVLCVSKD--------LPFA 88 (175)
T ss_dssp TTSBCCCCEEECTTSCEEEGGGGTTSCEEEEECSCCCSSCCCHHHHHHHHHHHH---TTCEEEEEESS--------CHHH
T ss_pred cCCcCCCeEEECCCCCEEeHHHcCCCEEEEEEEeCCCCchHHHHHHHHHHHHhh---cCCEEEEEECC--------CHHH
Confidence 899999999999999999999999999999999999 99999999999999998 57999999976 7888
Q ss_pred HHHHHHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCC--CCCchhhhhcc
Q 028944 121 IQEVACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAP--TTSPLKIEVGT 197 (201)
Q Consensus 121 ~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g--~~~~~~l~~~l 197 (201)
+++|+++ +++ +|+++ .|.++... ..|+..... .... + .+.|++||||++|+|++.+.| ..+..++++.|
T Consensus 89 ~~~~~~~-~~~~~~~~l--~D~~~~~~-~~~gv~~~~-~~~~--g-~~~p~~~lid~~G~I~~~~~g~~~~~~~~~~~~l 160 (175)
T 1xvq_A 89 QKRFCGA-EGTENVMPA--SAFRDSFG-EDYGVTIAD-GPMA--G-LLARAIVVIGADGNVAYTELVPEIAQEPNYEAAL 160 (175)
T ss_dssp HTTCC-------CEEEE--ECTTSSHH-HHTTCBBCS-STTT--T-SBCSEEEEECTTSBEEEEEECSBTTCCCCHHHHH
T ss_pred HHHHHHH-cCCCCceEe--eCCHHHHH-HHhCCcccc-cccC--C-cccceEEEECCCCeEEEEEECCCcCCCCCHHHHH
Confidence 9999954 688 79988 45443322 223211100 0000 1 234999999999999999864 22333455444
Q ss_pred c
Q 028944 198 T 198 (201)
Q Consensus 198 ~ 198 (201)
+
T Consensus 161 ~ 161 (175)
T 1xvq_A 161 A 161 (175)
T ss_dssp H
T ss_pred H
Confidence 3
No 81
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=1.2e-27 Score=173.48 Aligned_cols=136 Identities=23% Similarity=0.285 Sum_probs=111.0
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHH-HHHHhc-CCCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNV-LYEKYK-NQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~-~~~~~~-~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.|+.+|+|++.+.+|+.+++++++||++||+||++|||+|+.+++.|++ ++++++ +.++.+++|+.| ++.+
T Consensus 9 ~g~~~p~f~l~~~~g~~~~l~~~~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d-------~~~~ 81 (159)
T 2ls5_A 9 IGEMAPDFTITLTDGKQVTLSSLRGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRD-------EPLE 81 (159)
Confidence 7899999999999999999999999999999999999999999999998 999998 678999999987 3567
Q ss_pred HHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 120 EIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
.+++|.+ .++++||++ .|..+.... .|.. .+..+|+++|||++|++++++.|. +++++.+.+++
T Consensus 82 ~~~~~~~-~~~~~~~~~--~d~~~~~~~-~~~~-----------~~~~~P~~~lid~~G~i~~~~~g~-~~~~l~~~l~~ 145 (159)
T 2ls5_A 82 KVLAFAK-STGVTYPLG--LDPGADIFA-KYAL-----------RDAGITRNVLIDREGKIVKLTRLY-NEEEFASLVQQ 145 (159)
Confidence 7889985 469999998 454443332 2211 234469999999999999998874 45566666655
Q ss_pred C
Q 028944 200 P 200 (201)
Q Consensus 200 l 200 (201)
+
T Consensus 146 l 146 (159)
T 2ls5_A 146 I 146 (159)
Confidence 4
No 82
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=99.93 E-value=5e-26 Score=175.98 Aligned_cols=129 Identities=14% Similarity=0.128 Sum_probs=102.8
Q ss_pred cCCCcccceEEec---CCCCeeecCCCCCcEEEEEEee-cCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCC
Q 028944 41 EAPKSIYDFTVKD---IRGNDVSLSGYRGKVLLVVNVA-SKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPG 116 (201)
Q Consensus 41 ~~~~~~p~f~l~~---~~G~~~~l~~~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~ 116 (201)
..|+++|+|++.+ .+|+.+++++++||++||+||+ +|||+|+.+++.|++++++|+++|++|++||.|
T Consensus 49 ~vG~~aPdF~l~~~~d~~G~~vsLsd~~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D-------- 120 (240)
T 3qpm_A 49 KISKPAPQWEGTAVINGEFKELKLSDYRGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVD-------- 120 (240)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESS--------
T ss_pred CCCCCCCCcEeeeeeCCCCcEEEHHHhCCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECC--------
Confidence 3899999999875 4466999999999999999999 999999999999999999999999999999987
Q ss_pred CHHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC
Q 028944 117 SNEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT 188 (201)
Q Consensus 117 ~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~ 188 (201)
+.+..++|+++ + +++||++ .|.++... ..|+..... . + ...|++||||++|+|++.+.+..
T Consensus 121 ~~~~~~~~~~~-~~~~~~~~~~~fp~l--~D~~~~v~-~~ygv~~~~----~--g-~~~p~~flID~~G~I~~~~~~~~ 188 (240)
T 3qpm_A 121 SQFTHLAWIIT-PRKQGGLGPMKIPLL--SDLTHQIS-KDYGVYLED----Q--G-HTLRGLFIIDEKGVLRQITMNDL 188 (240)
T ss_dssp CHHHHHHHHHS-CGGGTCCCSCSSCEE--ECTTSHHH-HHTTCEETT----T--T-EECEEEEEECTTSBEEEEEEECT
T ss_pred CHHHHHHHHHH-HHhhcCCCCCceeEE--eCchHHHH-HHhCCcccc----C--C-CccceEEEEcCCCeEEEEEecCC
Confidence 78899999854 4 7889998 55554332 223211100 0 0 14699999999999999976654
No 83
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=99.93 E-value=8.1e-26 Score=166.48 Aligned_cols=144 Identities=17% Similarity=0.118 Sum_probs=108.1
Q ss_pred cCCCcccceEEe-cCCCCeeecCC-CCCcEEE-EEEeecCCCCcH-HhHHHHHHHHHHhcCCCeEEEE-eecCCCCCCCC
Q 028944 41 EAPKSIYDFTVK-DIRGNDVSLSG-YRGKVLL-VVNVASKCGLTQ-SNYKELNVLYEKYKNQDFEVLA-FPCNQFAGQEP 115 (201)
Q Consensus 41 ~~~~~~p~f~l~-~~~G~~~~l~~-~~gk~~l-v~f~~~~C~~C~-~~~~~l~~~~~~~~~~~~~vv~-vs~d~~~~~~~ 115 (201)
..|+++|+|++. +.+|+.+++++ ++||++| ++||++|||+|+ .+++.+++++++|+++|+++|+ ||.|
T Consensus 16 ~vG~~aPdf~l~~~~~g~~v~L~d~~~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D------- 88 (173)
T 3mng_A 16 KVGDAIPAVEVFEGEPGNKVNLAELFKGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVN------- 88 (173)
T ss_dssp CTTCBCCCCEEECSSTTCEEEHHHHTTTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS-------
T ss_pred CCCCCCCCeEeeeCCCCCEEEhHHHhCCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCC-------
Confidence 389999999999 99999999999 6998655 556699999999 5999999999999999999997 9976
Q ss_pred CCHHHHHHHHHhhcCcc--cceeeeeccCCCCchhhHHHHHhhc-CCcccccccccceEEEECCCCcEEEecCCCC----
Q 028944 116 GSNEEIQEVACTMFKAE--FPIFDKIDVNGKNAAPIYKFLKSEK-GGFLGDAIKWNFTKFLVNKEGKVVERYAPTT---- 188 (201)
Q Consensus 116 ~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~---- 188 (201)
+++.+++|+++ ++++ ||++ .|.++... +.|+....+. .+..| +....|++|||| +|+|++.+.++.
T Consensus 89 -~~~~~~~f~~~-~~~~~~fp~l--~D~~~~va-~~yGv~~~~~~~~~~g-~~~~~r~tfvID-dG~I~~~~v~~~~~g~ 161 (173)
T 3mng_A 89 -DAFVTGEWGRA-HKAEGKVRLL--ADPTGAFG-KETDLLLDDSLVSIFG-NRRLKRFSMVVQ-DGIVKALNVEPDGTGL 161 (173)
T ss_dssp -CHHHHHHHHHH-TTCTTTCEEE--ECTTCHHH-HHHTCBCCSTTHHHHS-SCCBCCEEEEEE-TTEEEEEEECTTSSCS
T ss_pred -CHHHHHHHHHH-hCCCCceEEE--ECCChHHH-HHhCCCcccccccccC-CcceEEEEEEEE-CCEEEEEEEeCCCCCc
Confidence 78999999965 5888 9999 66655443 3333221100 00001 123559999999 999999987764
Q ss_pred Cchhhhhccc
Q 028944 189 SPLKIEVGTT 198 (201)
Q Consensus 189 ~~~~l~~~l~ 198 (201)
+.++..+.|+
T Consensus 162 ~~~~~~~vl~ 171 (173)
T 3mng_A 162 TCSLAPNIIS 171 (173)
T ss_dssp STTSHHHHHH
T ss_pred chHHHHHHHH
Confidence 3344554444
No 84
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=99.93 E-value=7.5e-26 Score=165.84 Aligned_cols=132 Identities=10% Similarity=0.087 Sum_probs=103.3
Q ss_pred CCCcccceEEe-cCCCCeeecCCC-CCcEEEEEEe-ecCCCCcHH-hHHHHHHHHHHhcCCCe-EEEEeecCCCCCCCCC
Q 028944 42 APKSIYDFTVK-DIRGNDVSLSGY-RGKVLLVVNV-ASKCGLTQS-NYKELNVLYEKYKNQDF-EVLAFPCNQFAGQEPG 116 (201)
Q Consensus 42 ~~~~~p~f~l~-~~~G~~~~l~~~-~gk~~lv~f~-~~~C~~C~~-~~~~l~~~~~~~~~~~~-~vv~vs~d~~~~~~~~ 116 (201)
.|+.+|+|++. +.+|+.++++++ +||++||+|| ++|||+|+. ++|.|++++++++++|+ +|++||.|
T Consensus 5 ~G~~aP~f~l~~~~~G~~v~L~d~~~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d-------- 76 (167)
T 2wfc_A 5 EGDKLPAVTVFGATPNDKVNMAELFAGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVN-------- 76 (167)
T ss_dssp TTCBCCCCEEESSSTTCEEEHHHHTTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESS--------
T ss_pred CCCcCCCcEeecCCCCcEEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC--------
Confidence 79999999999 999999999998 9998888886 999999999 99999999999998899 99999976
Q ss_pred CHHHHHHHHHhhcCcc--cceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC
Q 028944 117 SNEEIQEVACTMFKAE--FPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT 188 (201)
Q Consensus 117 ~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~ 188 (201)
+++.+++|+++ ++++ ||++ .|.++...+ .|+...... ... +.....|++||| ++|+|++.+.+..
T Consensus 77 ~~~~~~~~~~~-~~~~~~fp~l--~D~~~~~~~-~~gv~~~~~-~~~-g~~~~~p~t~lI-~~G~I~~~~~~~~ 143 (167)
T 2wfc_A 77 DSFVMDAWGKA-HGADDKVQML--ADPGGAFTK-AVDMELDLS-AVL-GNVRSKRYSLVI-EDGVVTKVNVEPD 143 (167)
T ss_dssp CHHHHHHHHHH-TTCTTTSEEE--ECTTSHHHH-HTTCEECCH-HHH-SSCEECCEEEEE-ETTEEEEEEECTT
T ss_pred CHHHHHHHHHh-cCCCcceEEE--ECCCCcHHH-HcCCccccc-ccc-CcccceEEEEEE-eCCEEEEEEecCC
Confidence 78899999965 5898 9999 555543332 222110000 000 012244999999 9999999976654
No 85
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=99.92 E-value=7.5e-26 Score=168.26 Aligned_cols=144 Identities=11% Similarity=0.020 Sum_probs=109.0
Q ss_pred cCCCcccceEEecC--CC-CeeecCC-CCCcE-EEEEEeecCCCCcHH-hHHHHHHHHHHhcCCCeE-EEEeecCCCCCC
Q 028944 41 EAPKSIYDFTVKDI--RG-NDVSLSG-YRGKV-LLVVNVASKCGLTQS-NYKELNVLYEKYKNQDFE-VLAFPCNQFAGQ 113 (201)
Q Consensus 41 ~~~~~~p~f~l~~~--~G-~~~~l~~-~~gk~-~lv~f~~~~C~~C~~-~~~~l~~~~~~~~~~~~~-vv~vs~d~~~~~ 113 (201)
..|+++|+|++.+. +| +.+++++ ++||+ +|++||++|||+|+. ++|.|++++++|+++|++ |++||.|
T Consensus 27 ~vG~~aPdf~l~~~~~~G~~~v~L~d~~~Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d----- 101 (184)
T 3uma_A 27 AVGDKLPNATFKEKTADGPVEVTTELLFKGKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVN----- 101 (184)
T ss_dssp CTTCBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESS-----
T ss_pred CCCCCCCCcEeecccCCCceEEeHHHHhCCCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECC-----
Confidence 38999999999998 99 9999999 89985 566677999999999 899999999999999999 9999976
Q ss_pred CCCCHHHHHHHHHhhcCcc--cceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC---
Q 028944 114 EPGSNEEIQEVACTMFKAE--FPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT--- 188 (201)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~--- 188 (201)
+++.+++|+++ ++++ ||++ .|.++... +.|+...... ..|.++...|++|||| +|+|++.+.+..
T Consensus 102 ---~~~~~~~f~~~-~~~~~~fp~l--~D~~~~va-~~yGv~~~~~--~~g~g~~~~r~tfiId-dG~I~~~~~~~~~g~ 171 (184)
T 3uma_A 102 ---DLHVMGAWATH-SGGMGKIHFL--SDWNAAFT-KAIGMEIDLS--AGTLGIRSKRYSMLVE-DGVVKALNIEESPGQ 171 (184)
T ss_dssp ---CHHHHHHHHHH-HTCTTTSEEE--ECTTCHHH-HHTTCEEEEG--GGTCEEEECCEEEEEE-TTEEEEEEECSSTTC
T ss_pred ---CHHHHHHHHHH-hCCCCceEEE--EcCchHHH-HHcCCceecc--ccCCcccceeEEEEEC-CCEEEEEEEeCCCCC
Confidence 78999999965 5998 9999 66655443 3332211000 0111334568999996 999999987653
Q ss_pred -CchhhhhcccC
Q 028944 189 -SPLKIEVGTTI 199 (201)
Q Consensus 189 -~~~~l~~~l~~ 199 (201)
+.+..++.|++
T Consensus 172 ~~~~~~~~vL~~ 183 (184)
T 3uma_A 172 ATASGAAAMLEL 183 (184)
T ss_dssp CSTTSHHHHHHH
T ss_pred CcCCCHHHHHhh
Confidence 23445554443
No 86
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=99.92 E-value=1.6e-25 Score=174.34 Aligned_cols=129 Identities=14% Similarity=0.117 Sum_probs=103.2
Q ss_pred cCCCcccceEEec---CCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCC
Q 028944 41 EAPKSIYDFTVKD---IRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPG 116 (201)
Q Consensus 41 ~~~~~~p~f~l~~---~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~ 116 (201)
..|+++|+|++.+ .+|+.+++++++||++||+|| ++|||+|+.+++.|++++++|+++|++||+||.|
T Consensus 63 ~vG~~aPdF~l~~l~d~~G~~vsLsd~kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D-------- 134 (254)
T 3tjj_A 63 KISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVD-------- 134 (254)
T ss_dssp CTTSBCCCCEEEEEETTEEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESS--------
T ss_pred CCCCCCCCcEeeeecCCCCcEEeHHHHCCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCC--------
Confidence 3899999999774 467899999999999999999 8999999999999999999999999999999987
Q ss_pred CHHHHHHHHHhhc-------CcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC
Q 028944 117 SNEEIQEVACTMF-------KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT 188 (201)
Q Consensus 117 ~~~~~~~~~~~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~ 188 (201)
+.+.+++|+++ + +++||++ .|.++... ..|+..... . + ...|++||||++|+|++.+.+..
T Consensus 135 ~~~~~~~~~~~-~~~~~g~~~~~fp~l--~D~~~~va-~~ygv~~~~----~--g-~~~p~tflID~~G~I~~~~~~~~ 202 (254)
T 3tjj_A 135 SQFTHLAWINT-PRRQGGLGPIRIPLL--SDLTHQIS-KDYGVYLED----S--G-HTLRGLFIIDDKGILRQITLNDL 202 (254)
T ss_dssp CHHHHHHHHTS-CGGGTSCCSCSSCEE--ECTTSHHH-HHHTCEETT----T--T-EECEEEEEECTTSBEEEEEEECT
T ss_pred CHHHHHHHHHH-HHHhcCCccccccee--eCcHHHHH-HHcCCcccc----C--C-CccceEEEECCCCeEEEEEecCC
Confidence 78899999843 4 6889999 55554332 333221100 0 1 14599999999999999976644
No 87
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=99.92 E-value=8.2e-26 Score=173.83 Aligned_cols=145 Identities=11% Similarity=0.124 Sum_probs=110.3
Q ss_pred CCCcccceEEecCCCCeeecCCCCCc-EEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGK-VLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk-~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.|+.+|+|++.+.+| .+++++++|+ ++||+|| ++|||+|+.+++.|++++++|+++|++||+||+| +.+
T Consensus 5 iG~~aPdF~l~~~~G-~v~l~d~~Gk~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D--------~~~ 75 (233)
T 2v2g_A 5 LGEVFPNFEADSTIG-KLKFHDWLGNSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCD--------NVA 75 (233)
T ss_dssp TTCBCCCCEEEETTC-CEEHHHHHCSSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------CHH
T ss_pred CCCCCCCcEEecCCC-CEEHHHHCCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCC--------CHH
Confidence 799999999999999 9999999997 9999998 8999999999999999999999889999999987 678
Q ss_pred HHHHHHHh-----hc--CcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC----
Q 028944 120 EIQEVACT-----MF--KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT---- 188 (201)
Q Consensus 120 ~~~~~~~~-----~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~---- 188 (201)
.+++|++. .+ +++||++ .|.++... ..|+..........|. ....|++||||++|+|++.+.+..
T Consensus 76 ~~~~~~~~i~~~~~~~~~~~fpil--~D~~~~va-~~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~~~~~gr 151 (233)
T 2v2g_A 76 DHKEWSEDVKCLSGVKGDMPYPII--ADETRELA-VKLGMVDPDERTSTGM-PLTCRAVFIIGPDKKLKLSILYPATTGR 151 (233)
T ss_dssp HHHHHHHHHHHHHTCCSSCSSCEE--ECTTCHHH-HHTTCEEEEEECTTCC-EEECEEEEEECTTSBEEEEEEECTTBCC
T ss_pred HHHHHHHHHHHhhCcccCCceEEE--ECChHHHH-HHhCCcCcccccCCCc-ccccceEEEECCCCEEEEEEecCCCCCC
Confidence 88888852 46 7899999 55544333 3332221100000000 124699999999999999976543
Q ss_pred CchhhhhcccC
Q 028944 189 SPLKIEVGTTI 199 (201)
Q Consensus 189 ~~~~l~~~l~~ 199 (201)
+.+++.+.|+.
T Consensus 152 ~~~eilr~l~~ 162 (233)
T 2v2g_A 152 NFSEILRVIDS 162 (233)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 44566665543
No 88
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.92 E-value=9.3e-26 Score=162.54 Aligned_cols=133 Identities=17% Similarity=0.227 Sum_probs=109.3
Q ss_pred CCCcccceEEecCCC--------CeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCC
Q 028944 42 APKSIYDFTVKDIRG--------NDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQ 113 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G--------~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~ 113 (201)
.|+.+|+|++.+.+| +.+++++++||++||+||++||++|+.+++.|++++++ .++.+++|+.|
T Consensus 10 ~g~~~p~f~l~~~~g~~~~~~~~~~~~l~~~~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~---~~v~~v~v~~~----- 81 (156)
T 1kng_A 10 IGRPAPQTALPPLEGLQADNVQVPGLDPAAFKGKVSLVNVWASWCVPCHDEAPLLTELGKD---KRFQLVGINYK----- 81 (156)
T ss_dssp --CBCCCCCBCCCTTCEETTEECCCBCGGGGTTSCEEEEEECTTCHHHHHHHHHHHHHTTC---TTSEEEEEEES-----
T ss_pred hCCCCCCceeeeccCcccccccCceechHHhCCCEEEEEEEcccCHhHHHHHHHHHHHHhc---CCeEEEEEECC-----
Confidence 789999999999999 99999999999999999999999999999999998776 34999999987
Q ss_pred CCCCHHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhh
Q 028944 114 EPGSNEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKI 193 (201)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l 193 (201)
++.+.+++|+++ ++++|+.+. .|...... .. +++..+|+++++|++|+++.++.|..+.+++
T Consensus 82 --~~~~~~~~~~~~-~~~~~~~~~-~d~~~~~~-~~-------------~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l 143 (156)
T 1kng_A 82 --DAADNARRFLGR-YGNPFGRVG-VDANGRAS-IE-------------WGVYGVPETFVVGREGTIVYKLVGPITPDNL 143 (156)
T ss_dssp --CCHHHHHHHHHH-HCCCCSEEE-EETTSHHH-HH-------------TTCCSSCEEEEECTTSBEEEEEESCCCHHHH
T ss_pred --CCHHHHHHHHHH-cCCCCceee-eCchhHHH-Hh-------------cCcCccCeEEEEcCCCCEEEEEeCCCCHHHH
Confidence 478999999965 599999431 34332221 11 2677789999999999999999999888888
Q ss_pred hhcccCC
Q 028944 194 EVGTTIP 200 (201)
Q Consensus 194 ~~~l~~l 200 (201)
.+.|+++
T Consensus 144 ~~~l~~~ 150 (156)
T 1kng_A 144 RSVLLPQ 150 (156)
T ss_dssp HHTHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 89
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=99.92 E-value=2e-25 Score=170.95 Aligned_cols=145 Identities=14% Similarity=0.099 Sum_probs=109.0
Q ss_pred CCCcccceEEecCCCCeeecCCCCCc--EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGK--VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk--~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.|+.+|+|++.+.+| .+++++++|+ ++|++||++|||+|+.+++.|++++++|+++|++||+||+| +.+
T Consensus 7 ~G~~aP~F~l~~~~G-~v~l~d~~Gk~~vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D--------~~~ 77 (224)
T 1prx_A 7 LGDVAPNFEANTTVG-RIRFHDFLGDSWGILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSID--------SVE 77 (224)
T ss_dssp TTCBCCCCEEEETTE-EEEHHHHHTTSEEEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESS--------CHH
T ss_pred CcCCCCCcEEecCCC-CEEHHHHcCCCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCC--------CHH
Confidence 799999999999999 9999999987 56667799999999999999999999999999999999987 677
Q ss_pred HHHHHHHh-----h----cCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC--
Q 028944 120 EIQEVACT-----M----FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT-- 188 (201)
Q Consensus 120 ~~~~~~~~-----~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~-- 188 (201)
.+++|+++ . ++++||++ .|.++... ..|+.......+..|. ....|++||||++|+|++.+.+..
T Consensus 78 ~~~~~~~~i~~~~~~~~~~~~~fpil--~D~~~~va-~~ygv~~~~~~~~~g~-~~~~p~~fiID~~G~I~~~~~~~~~~ 153 (224)
T 1prx_A 78 DHLAWSKDINAYNSEEPTEKLPFPII--DDRNRELA-ILLGMLDPAEKDEKGM-PVTARVVFVFGPDKKLKLSILYPATT 153 (224)
T ss_dssp HHHHHHHHHHHHTTSCCCSCCSSCEE--ECTTCHHH-HHTTSSCSCTTCSSSC-CTTCCEEEEECTTSBEEEEEECCTTB
T ss_pred HHHHHHHHHHHhhCcccccCcCccee--ecCchHHH-HHhCCCCcccccCCCc-cccceEEEEECCCCEEEEEEecCCCC
Confidence 88888853 1 58899999 55544333 3333221100000010 224699999999999999986543
Q ss_pred --CchhhhhcccC
Q 028944 189 --SPLKIEVGTTI 199 (201)
Q Consensus 189 --~~~~l~~~l~~ 199 (201)
+.+++...|+.
T Consensus 154 gr~~~eil~~i~~ 166 (224)
T 1prx_A 154 GRNFDEILRVVIS 166 (224)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 45666666554
No 90
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=99.92 E-value=2e-25 Score=170.52 Aligned_cols=144 Identities=19% Similarity=0.197 Sum_probs=108.2
Q ss_pred CCCcccceEEecC--CCCeeecCCCCCc-E-EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 42 APKSIYDFTVKDI--RGNDVSLSGYRGK-V-LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 42 ~~~~~p~f~l~~~--~G~~~~l~~~~gk-~-~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
.|+.+|+|++.+. +| .+++++++|| + +|++||++|||+|+.+++.|++++++|+++|++||+||+| +
T Consensus 5 iG~~aP~F~l~~~~~~G-~v~l~d~~Gk~~vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D--------~ 75 (220)
T 1xcc_A 5 LGATFPNFTAKASGIDG-DFELYKYIENSWAILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCN--------S 75 (220)
T ss_dssp TTCBCCCCEECBTTCSS-CEEHHHHTTTSEEEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESS--------C
T ss_pred CCCCCCCcEeecccCCC-cEeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCC--------C
Confidence 7999999999999 99 9999999998 4 5556689999999999999999999999999999999987 6
Q ss_pred HHHHHHHHH------hhcCcccceeeeeccCCCCchhhHHHHHhhcCCccccc-ccccceEEEECCCCcEEEecCCCC--
Q 028944 118 NEEIQEVAC------TMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDA-IKWNFTKFLVNKEGKVVERYAPTT-- 188 (201)
Q Consensus 118 ~~~~~~~~~------~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-i~~~P~~~lid~~G~i~~~~~g~~-- 188 (201)
.+.+++|.+ ..++++||++ .|.++... ..|+........ +.+ ....|++||||++|+|++.+.+..
T Consensus 76 ~~~~~~~~~~i~~~~~~~~~~fpil--~D~~~~va-~~ygv~~~~~~~--~~g~~~~~p~~flID~~G~I~~~~~~~~~~ 150 (220)
T 1xcc_A 76 KESHDKWIEDIKYYGKLNKWEIPIV--CDESRELA-NKLKIMDEQEKD--ITGLPLTCRCLFFISPEKKIKATVLYPATT 150 (220)
T ss_dssp HHHHHHHHHHHHHHHTCSCCCCCEE--ECTTSHHH-HHHTCEEEEEEC--TTSCEEECEEEEEECTTSBEEEEEEECTTB
T ss_pred HHHHHHHHHHHHHHhcCCCCcceeE--ECchhHHH-HHhCCCCccccc--CCCCCcccceEEEECCCCEEEEEEecCCCC
Confidence 777888875 1468999999 55544333 334322110000 001 124699999999999999976543
Q ss_pred --CchhhhhcccC
Q 028944 189 --SPLKIEVGTTI 199 (201)
Q Consensus 189 --~~~~l~~~l~~ 199 (201)
+.+++...|+.
T Consensus 151 g~~~~ell~~i~~ 163 (220)
T 1xcc_A 151 GRNAHEILRVLKS 163 (220)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 45666666654
No 91
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=99.91 E-value=1.4e-24 Score=167.90 Aligned_cols=132 Identities=20% Similarity=0.187 Sum_probs=104.0
Q ss_pred CCCcccceEEecC-CCC--eeecCC-CCCcEEEEEEe-ecCCCCcH-HhHHHHHHHHHHhcCCCe-EEEEeecCCCCCCC
Q 028944 42 APKSIYDFTVKDI-RGN--DVSLSG-YRGKVLLVVNV-ASKCGLTQ-SNYKELNVLYEKYKNQDF-EVLAFPCNQFAGQE 114 (201)
Q Consensus 42 ~~~~~p~f~l~~~-~G~--~~~l~~-~~gk~~lv~f~-~~~C~~C~-~~~~~l~~~~~~~~~~~~-~vv~vs~d~~~~~~ 114 (201)
.|+.+|+|++.+. +|+ .+++++ ++||++||+|| ++|||+|+ .++|.|++++++++++|+ +|++||.|
T Consensus 5 ~G~~aP~f~l~~~~~g~~~~v~l~~~~~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d------ 78 (241)
T 1nm3_A 5 EGKKVPQVTFRTRQGDKWVDVTTSELFDNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVN------ 78 (241)
T ss_dssp TTSBCCCCEEEEEETTEEEEEEHHHHHTTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESS------
T ss_pred CCCCCCCeEEEcccCCCceeecHHHHhCCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcC------
Confidence 7899999999996 777 899999 89999999999 99999999 999999999999998899 99999976
Q ss_pred CCCHHHHHHHHHhhcCcc-cceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC
Q 028944 115 PGSNEEIQEVACTMFKAE-FPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT 188 (201)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~ 188 (201)
+.+.+++|+++ ++.+ ||++ .|.++... ..|+.... .+..|.+....|++||| ++|+|++.+.|..
T Consensus 79 --~~~~~~~~~~~-~~~~~~~~l--~D~~~~~~-~~~gv~~~--~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~ 144 (241)
T 1nm3_A 79 --DTFVMNAWKED-EKSENISFI--PDGNGEFT-EGMGMLVG--KEDLGFGKRSWRYSMLV-KNGVVEKMFIEPN 144 (241)
T ss_dssp --CHHHHHHHHHH-TTCTTSEEE--ECTTSHHH-HHTTCEEE--CTTTTCCEEECCEEEEE-ETTEEEEEEECCS
T ss_pred --CHHHHHHHHHh-cCCCceEEE--ECCCcHHH-HHhCceee--cccccCcccceeEEEEE-ECCEEEEEEEecc
Confidence 68899999965 5886 9999 55554333 22321110 00001112355999999 9999999987764
No 92
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=99.91 E-value=9.4e-25 Score=160.59 Aligned_cols=132 Identities=14% Similarity=0.138 Sum_probs=101.5
Q ss_pred CCCcccceEEecC----CC-----CeeecCCC-CCc-EEEEEEeecCCCCcHHh-HHHHHHHHHHhcCCCeE-EEEeecC
Q 028944 42 APKSIYDFTVKDI----RG-----NDVSLSGY-RGK-VLLVVNVASKCGLTQSN-YKELNVLYEKYKNQDFE-VLAFPCN 108 (201)
Q Consensus 42 ~~~~~p~f~l~~~----~G-----~~~~l~~~-~gk-~~lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~~~~-vv~vs~d 108 (201)
.|+++|+|++.+. +| +.++++++ +|| ++|++||++|||+|+.+ +|.|++++++|+++|+. |++||.|
T Consensus 9 ~g~~aP~f~l~~~~~~~~G~~~~~~~v~l~~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d 88 (171)
T 2pwj_A 9 ILSAASNVSLQKARTWDEGVESKFSTTPVNDIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAIN 88 (171)
T ss_dssp -CCCSSSBCCCSCEECCCSSCTTCCCEEHHHHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESS
T ss_pred ccCcCCCeEEecccccccCCccCcceEEHHHHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 5779999999998 57 89999996 996 77889999999999999 99999999999988999 9999976
Q ss_pred CCCCCCCCCHHHHHHHHHhhcCc--ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCC
Q 028944 109 QFAGQEPGSNEEIQEVACTMFKA--EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAP 186 (201)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g 186 (201)
+.+.+++|+++ +++ +||++ .|.++... ..|+.... ....+.++...|++|+|| +|+|++.+.|
T Consensus 89 --------~~~~~~~~~~~-~~~~~~fp~l--~D~~~~~~-~~ygv~~~--~~~~~~g~~~~~~t~~I~-~G~I~~~~~~ 153 (171)
T 2pwj_A 89 --------DPYTVNAWAEK-IQAKDAIEFY--GDFDGSFH-KSLELTTD--LSAGLLGIRSERWSAYVV-DGKVKALNVE 153 (171)
T ss_dssp --------CHHHHHHHHHH-TTCTTTSEEE--ECTTCHHH-HHHTCEEE--CTTTTCCEEECCEEEEEE-TTEEEEEEEC
T ss_pred --------CHHHHHHHHHH-hCCCCceEEE--ECCccHHH-HHhCCccc--cccccCCcccceeEEEEE-CCEEEEEEee
Confidence 67899999965 585 79998 56655443 23322110 000011233457899999 9999999877
Q ss_pred CC
Q 028944 187 TT 188 (201)
Q Consensus 187 ~~ 188 (201)
..
T Consensus 154 ~~ 155 (171)
T 2pwj_A 154 ES 155 (171)
T ss_dssp SS
T ss_pred cC
Confidence 64
No 93
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=99.91 E-value=8.8e-24 Score=160.67 Aligned_cols=137 Identities=11% Similarity=0.061 Sum_probs=103.7
Q ss_pred cCCCcccceEEecCCCCeeecCCCCCcEEEEEEeecC-CCCcH-----HhHHHHHHHHHHhcCCCeEEEEeecCCCCCCC
Q 028944 41 EAPKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASK-CGLTQ-----SNYKELNVLYEKYKNQDFEVLAFPCNQFAGQE 114 (201)
Q Consensus 41 ~~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~-C~~C~-----~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~ 114 (201)
.+|+++|+|+|.|.+|+.+++++++||++||+||++| ||+|. .+++.+++. + +|+.|++||.|
T Consensus 23 ~vG~~APdFtL~d~~G~~vsLsd~~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~--~gv~VvgIS~D------ 91 (224)
T 3keb_A 23 RKGDYLPSFMLVDDQKHDAALESFSHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W--PHLKLIVITVD------ 91 (224)
T ss_dssp CTTCBCCCCEEEETTSCEEEGGGGTTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C--TTSEEEEEESS------
T ss_pred CCCCCCCCeEEECCCCCEEeHHHhCCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c--CCCEEEEEECC------
Confidence 3899999999999999999999999999999999988 89999 888888887 5 67999999976
Q ss_pred CCCHHHHHHHHHhhcCc-ccceeeeecc-CCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCC-----
Q 028944 115 PGSNEEIQEVACTMFKA-EFPIFDKIDV-NGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPT----- 187 (201)
Q Consensus 115 ~~~~~~~~~~~~~~~~~-~~~~~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~----- 187 (201)
+++.+++|.++ +++ +||++ .|. ++.. ...|+...... ... + ...|++||||++|+|++.+...
T Consensus 92 --s~~~~~~f~~~-~gl~~fplL--sD~~~~~v-ak~yGv~~~~~-~~~--G-~~~p~tfvID~dG~I~~~~~~~~~~~~ 161 (224)
T 3keb_A 92 --SPSSLARARHE-HGLPNIALL--STLRGRDF-HKRYGVLITEY-PLS--G-YTSPAIILADAANVVHYSERLANTRDF 161 (224)
T ss_dssp --CHHHHHHHHHH-HCCTTCEEE--ESTTCTTH-HHHTTCBCCST-TST--T-CBCCEEEEECTTCBEEEEEECSBTTCC
T ss_pred --CHHHHHHHHHH-cCCCCceEE--EcCCchHH-HHHhCCccccc-ccc--C-CccCEEEEEcCCCEEEEEEecCCCCCC
Confidence 88999999965 598 69999 565 3433 33343221100 000 1 1359999999999999885432
Q ss_pred CCchhhhhccc
Q 028944 188 TSPLKIEVGTT 198 (201)
Q Consensus 188 ~~~~~l~~~l~ 198 (201)
.+.+++.+.|+
T Consensus 162 pd~~evl~~L~ 172 (224)
T 3keb_A 162 FDFDAIEKLLQ 172 (224)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 34455655554
No 94
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=99.90 E-value=1.1e-24 Score=168.65 Aligned_cols=140 Identities=17% Similarity=0.179 Sum_probs=108.6
Q ss_pred CCCcccceEEecCCCCeeec-CCC--CCcE-EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 42 APKSIYDFTVKDIRGNDVSL-SGY--RGKV-LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l-~~~--~gk~-~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
.|+.+|+|++.+.+| .+++ +++ +||+ +|++||++|||+|+.+++.|++++++|+++|++|++||+| +
T Consensus 7 iG~~aPdF~l~~~~G-~v~l~~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~D--------s 77 (249)
T 3a2v_A 7 IGERFPEMEVTTDHG-VIKLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVD--------S 77 (249)
T ss_dssp TTSBCCCEEEEETTE-EEEETHHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESS--------C
T ss_pred CCCCCCCeEEEcCCC-CEecHHHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECC--------C
Confidence 799999999999999 8999 999 9996 4568899999999999999999999999889999999987 6
Q ss_pred HHHHHHHHHh-----hcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC----
Q 028944 118 NEEIQEVACT-----MFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT---- 188 (201)
Q Consensus 118 ~~~~~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~---- 188 (201)
.+..++|.+. ..+++||++ .|.++... ..|+..... .++..+|++||||++|+|++.+.+..
T Consensus 78 ~~~~~~w~~~~~~~~~~~i~fPil--~D~~~~ia-~~ygv~~~~------~g~~~~p~~fIID~dG~I~~~~~~~~~~gr 148 (249)
T 3a2v_A 78 VFSHIKWKEWIERHIGVRIPFPII--ADPQGTVA-RRLGLLHAE------SATHTVRGVFIVDARGVIRTMLYYPMELGR 148 (249)
T ss_dssp HHHHHHHHHHHHHHTCCCCCSCEE--ECTTSHHH-HHHTCCCTT------CSSSCCEEEEEECTTSBEEEEEEECTTBCC
T ss_pred HHHHHHHHHHHHHhcCCCCceeEE--ECCchHHH-HHhCCcccc------CCCcccceEEEECCCCeEEEEEecCCcccc
Confidence 7777777743 147889998 55544433 333221100 02236799999999999999977664
Q ss_pred CchhhhhcccC
Q 028944 189 SPLKIEVGTTI 199 (201)
Q Consensus 189 ~~~~l~~~l~~ 199 (201)
+.+++...|++
T Consensus 149 ~~~Ellr~I~a 159 (249)
T 3a2v_A 149 LVDEILRIVKA 159 (249)
T ss_dssp CHHHHHHHHHH
T ss_pred hhHHHHHHHHH
Confidence 45666666654
No 95
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.90 E-value=2.2e-24 Score=153.70 Aligned_cols=121 Identities=19% Similarity=0.163 Sum_probs=97.6
Q ss_pred CCCcccc-eEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC-CCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYD-FTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKN-QDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~-f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.++.+|+ |++.+.+|+.+++++++||++||+||++||++|+.++|.|+++++++++ .++.|++|++| ++.+
T Consensus 3 ~~~~~P~~f~l~~~~g~~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d-------~~~~ 75 (144)
T 1i5g_A 3 LKKFFPYSTNVLKGAAADIALPSLAGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWD-------ESAE 75 (144)
T ss_dssp TTTSCSSCSEEEETTEEEEEGGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSHH
T ss_pred hhhhCCCceEEEcCCCCEecHHHcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCHH
Confidence 5678999 9999999999999999999999999999999999999999999999985 58999999988 4789
Q ss_pred HHHHHHHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEEC-CCCcEEEecC
Q 028944 120 EIQEVACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVN-KEGKVVERYA 185 (201)
Q Consensus 120 ~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid-~~G~i~~~~~ 185 (201)
++++|+++ ++. .+|+.. .|.. ..+... +++..+|+++||| ++|++++++.
T Consensus 76 ~~~~~~~~-~~~~~~~~~~-~d~~----~~~~~~----------~~v~~~P~~~lid~~~G~i~~~~~ 127 (144)
T 1i5g_A 76 DFKDYYAK-MPWLALPFED-RKGM----EFLTTG----------FDVKSIPTLVGVEADSGNIITTQA 127 (144)
T ss_dssp HHHHHHTT-CSSEECCTTC-HHHH----HHHHHH----------TTCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHh-CCccccccCc-hHHH----HHHHHH----------cCCCCCCEEEEEECCCCcEEeccc
Confidence 99999955 443 454331 0111 111111 3677789999999 9999998753
No 96
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3e-24 Score=162.15 Aligned_cols=145 Identities=17% Similarity=0.132 Sum_probs=110.1
Q ss_pred cccccccCCCcccceEEe---cCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCC
Q 028944 35 KNMATQEAPKSIYDFTVK---DIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQF 110 (201)
Q Consensus 35 ~~~~~~~~~~~~p~f~l~---~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~ 110 (201)
..|..+ +|+++|+|++. |.+|+.++|++++||++|++|| +.|||.|..+++.+++.+++|++.|++|++||.|
T Consensus 19 ~~M~~~-VG~~APdF~l~a~~d~~~~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~D-- 95 (216)
T 3sbc_A 19 SHMVAQ-VQKQAPTFKKTAVVDGVFDEVSLDKYKGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTD-- 95 (216)
T ss_dssp ---CCC-TTSBCCCCCEEEEETTEEEEECGGGGTTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESS--
T ss_pred Ccchhh-cCCcCCCCCCcceECCCCcEEehHHhCCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecC--
Confidence 345555 99999999976 6677899999999999999999 7899999999999999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHhh------cCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEec
Q 028944 111 AGQEPGSNEEIQEVACTM------FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERY 184 (201)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~ 184 (201)
+....++|.+.. .+++||++ .|.++... ..|+.+... . + ...+.+||||++|+|++..
T Consensus 96 ------s~~sh~aw~~~~~~~~~~~~l~fpll--sD~~~~va-k~YGv~~~~-~-----g-~~~R~tFiID~~G~Ir~~~ 159 (216)
T 3sbc_A 96 ------SEYSLLAWTNIPRKEGGLGPINIPLL--ADTNHSLS-RDYGVLIEE-E-----G-VALRGLFIIDPKGVIRHIT 159 (216)
T ss_dssp ------CHHHHHHHHTSCGGGTCCCSCSSCEE--ECTTSHHH-HHHTCEETT-T-----T-EECEEEEEECTTSBEEEEE
T ss_pred ------chhhHHHHHHHHHHhCCccCcccceE--eCCCCHHH-HHcCCeecc-C-----C-ceeeEEEEECCCCeEEEEE
Confidence 899999998432 14789999 66666554 445443221 0 1 2348899999999999875
Q ss_pred CCCC----Cchhhhhccc
Q 028944 185 APTT----SPLKIEVGTT 198 (201)
Q Consensus 185 ~g~~----~~~~l~~~l~ 198 (201)
..+. +.+++...|+
T Consensus 160 v~~~~~grn~dEiLr~l~ 177 (216)
T 3sbc_A 160 INDLPVGRNVDEALRLVE 177 (216)
T ss_dssp EECTTBCCCHHHHHHHHH
T ss_pred EcCCCCCCCHHHHHHHHH
Confidence 3333 4455555444
No 97
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.90 E-value=1.7e-24 Score=158.16 Aligned_cols=120 Identities=16% Similarity=0.198 Sum_probs=96.7
Q ss_pred CCCcccce-EEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC-CCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDF-TVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKN-QDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f-~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
+|+.+|+| ++.+.+| .+++++++||++||+||++||++|+.++|.|+++++++++ +++.|++|++| ++.+
T Consensus 24 vG~~~P~f~~l~~~~g-~v~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d-------~~~~ 95 (165)
T 3s9f_A 24 VAKHLGEALKLRKQAD-TADMDSLSGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWD-------EEED 95 (165)
T ss_dssp HHHHHHHTSCEEETTE-EECSGGGTTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------CSHH
T ss_pred hcccCCcceeeecCCC-cccHHHcCCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecC-------CCHH
Confidence 78899999 9999999 9999999999999999999999999999999999999986 58999999998 4789
Q ss_pred HHHHHHHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCC-CcEEEecC
Q 028944 120 EIQEVACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKE-GKVVERYA 185 (201)
Q Consensus 120 ~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~-G~i~~~~~ 185 (201)
++++|+++ ++. .+++. .+.. ...+... +++..+|+++|||++ |+|+.+..
T Consensus 96 ~~~~~~~~-~~~~~~~~~--~~~~---~~~l~~~----------~~v~~~Pt~~lid~~~G~iv~~~~ 147 (165)
T 3s9f_A 96 DFNAYYAK-MPWLSIPFA--NRNI---VEALTKK----------YSVESIPTLIGLNADTGDTVTTRA 147 (165)
T ss_dssp HHHHHHTT-CSSEECCTT--CHHH---HHHHHHH----------TTCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHh-CCCcccccC--chhH---HHHHHHH----------cCCCCCCEEEEEeCCCCEEEeccc
Confidence 99999954 342 34333 1000 0111111 367788999999998 99998754
No 98
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.90 E-value=6.3e-24 Score=151.71 Aligned_cols=121 Identities=18% Similarity=0.225 Sum_probs=96.8
Q ss_pred CCCcccc-eEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC-CCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYD-FTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKN-QDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~-f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.++.+|+ |++.|.+| .+++++++||++||+||++||++|+.++|.|+++++++++ +++.|++|++| ++.+
T Consensus 4 ~~~~~P~~f~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d-------~~~~ 75 (146)
T 1o8x_A 4 LDKYLPGIEKLRRGDG-EVEVKSLAGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWD-------EEED 75 (146)
T ss_dssp GGGTSTTCCEEEETTE-EEEGGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------CSHH
T ss_pred hHhhCCCceEEEcCCC-CCcHHHhCCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCC-------CCHH
Confidence 5678999 99999999 9999999999999999999999999999999999999984 58999999988 4789
Q ss_pred HHHHHHHhhcC-cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEEC-CCCcEEEecCC
Q 028944 120 EIQEVACTMFK-AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVN-KEGKVVERYAP 186 (201)
Q Consensus 120 ~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid-~~G~i~~~~~g 186 (201)
++++|+++ ++ ..+++.. .|.. ..+... +++..+|+++|+| ++|+++++..+
T Consensus 76 ~~~~~~~~-~~~~~~~~~~-~d~~----~~~~~~----------~~v~~~Pt~~lid~~~G~i~~~~~~ 128 (146)
T 1o8x_A 76 GFAGYFAK-MPWLAVPFAQ-SEAV----QKLSKH----------FNVESIPTLIGVDADSGDVVTTRAR 128 (146)
T ss_dssp HHHHHHTT-CSSEECCGGG-HHHH----HHHHHH----------TTCCSSSEEEEEETTTCCEEESCHH
T ss_pred HHHHHHHH-CCceeeccch-hhHH----HHHHHH----------hCCCCCCEEEEEECCCCeEEEecch
Confidence 99999955 34 3454431 0111 111111 3677789999999 99999987533
No 99
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=99.82 E-value=4.7e-25 Score=156.62 Aligned_cols=121 Identities=12% Similarity=0.140 Sum_probs=97.0
Q ss_pred CcccceEEecCCCCeeecCC-CCCc-EEEEEEeecCCCCcHHhHHHHHHHHHHhcC--CCeEEEEeecCCCCCCCCCCHH
Q 028944 44 KSIYDFTVKDIRGNDVSLSG-YRGK-VLLVVNVASKCGLTQSNYKELNVLYEKYKN--QDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 44 ~~~p~f~l~~~~G~~~~l~~-~~gk-~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
+.+|+|++.+.+|+.+++++ ++|| ++||+||++|||+|+.++|.|+++++++++ .++.+++|++| ++.+
T Consensus 2 ~~~p~~~l~~~~g~~~~l~~~~~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d-------~~~~ 74 (143)
T 2lus_A 2 EFIQGIKLVKKNRCEVNANEALKDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSD-------RSED 74 (143)
Confidence 35799999999999999999 9999 999999999999999999999999999953 47999999987 3678
Q ss_pred HHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecC
Q 028944 120 EIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYA 185 (201)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~ 185 (201)
.+++|+++ ++.+|+.+............. +++.++|+++|||++|+++++..
T Consensus 75 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------------~~v~~~P~~~lid~~G~i~~~~~ 126 (143)
T 2lus_A 75 DMFQYMME-SHGDWLAIPYRSGPASNVTAK-------------YGITGIPALVIVKKDGTLISMNG 126 (143)
Confidence 89999954 688887652111111111121 26777799999999999998743
No 100
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.89 E-value=1.2e-23 Score=149.66 Aligned_cols=120 Identities=19% Similarity=0.226 Sum_probs=95.3
Q ss_pred CCCcccce-EEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhc-CCCeEEEEeecCCCCCCCCCCHH
Q 028944 42 APKSIYDF-TVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYK-NQDFEVLAFPCNQFAGQEPGSNE 119 (201)
Q Consensus 42 ~~~~~p~f-~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~vv~vs~d~~~~~~~~~~~ 119 (201)
.|+.+|+| ++.|.+| .+++++++||++||+||++||++|+.++|.|++++++++ +.++.+++|++| ++.+
T Consensus 4 ~g~~~p~~~~l~~~~g-~~~l~~~~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d-------~~~~ 75 (144)
T 1o73_A 4 LAKYLPGATNLLSKSG-EVSLGSLVGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWD-------ENES 75 (144)
T ss_dssp GGGTSCTTCCBBCTTS-CBCSGGGTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECC-------SSHH
T ss_pred hhhhCccceEeecCCC-cCcHHHhCCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCC-------CCHH
Confidence 57889997 9999999 999999999999999999999999999999999999998 458999999998 3688
Q ss_pred HHHHHHHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEEC-CCCcEEEecC
Q 028944 120 EIQEVACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVN-KEGKVVERYA 185 (201)
Q Consensus 120 ~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid-~~G~i~~~~~ 185 (201)
++++|+++ ++. .+++.. .|. ...+... +++..+|+++|+| ++|+++++..
T Consensus 76 ~~~~~~~~-~~~~~~~~~~-~~~----~~~~~~~----------~~v~~~Pt~~lid~~~G~i~~~~~ 127 (144)
T 1o73_A 76 DFHDYYGK-MPWLALPFDQ-RST----VSELGKT----------FGVESIPTLITINADTGAIIGTQA 127 (144)
T ss_dssp HHHHHHTT-CSSEECCTTC-HHH----HHHHHHH----------HTCCSSSEEEEEETTTCCEEESCH
T ss_pred HHHHHHHh-CCceEeeccc-hhH----HHHHHHH----------cCCCCCCEEEEEECCCCeEEecch
Confidence 99999955 342 343320 010 1111111 2677789999999 8999998753
No 101
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=99.88 E-value=2.8e-23 Score=157.18 Aligned_cols=140 Identities=15% Similarity=0.117 Sum_probs=109.1
Q ss_pred cCCCcccceE----EecCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCC
Q 028944 41 EAPKSIYDFT----VKDIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEP 115 (201)
Q Consensus 41 ~~~~~~p~f~----l~~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~ 115 (201)
.+|++||+|+ +.|.+|+.++|++|+||++||+|| ..|||.|..++..+++.+++|++.|++|++||.|
T Consensus 27 ~vG~~APdF~~~a~l~d~~g~~vsLsd~~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~D------- 99 (219)
T 3tue_A 27 KINSPAPSFEEVALMPNGSFKKISLSSYKGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSID------- 99 (219)
T ss_dssp CTTSBCCCCEEEEECTTSCEEEEEGGGGTTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESS-------
T ss_pred ccCCcCCCCcccccccCCCCcEEehHHhCCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCC-------
Confidence 4899999999 457788999999999999999999 6899999999999999999999999999999987
Q ss_pred CCHHHHHHHHHhh------cCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC-
Q 028944 116 GSNEEIQEVACTM------FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT- 188 (201)
Q Consensus 116 ~~~~~~~~~~~~~------~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~- 188 (201)
+.+..++|..++ .+++||++ .|.++... +.|+.+.... + .....+||||++|+|++.+....
T Consensus 100 -s~~sh~~w~~~~~~~~~~~~l~fpll--sD~~~~va-~~yGv~~~~~------g-~~~R~tFiIDp~g~Ir~~~~~~~~ 168 (219)
T 3tue_A 100 -SEYAHLQWTLQDRKKGGLGTMAIPIL--ADKTKNIA-RSYGVLEESQ------G-VAYRGLFIIDPHGMLRQITVNDMP 168 (219)
T ss_dssp -CHHHHHHHHHSCGGGTCCCSCSSCEE--ECTTSHHH-HHTTCEETTT------T-EECEEEEEECTTSBEEEEEEECTT
T ss_pred -chhhHHHHhhhhHHhcCccccccccc--cCcccHHH-HHcCCcccCC------C-eeEEEEEEECCCCeEEEEEEecCC
Confidence 899999998542 25789999 66666554 4454432210 1 12367899999999998753322
Q ss_pred ---Cchhhhhccc
Q 028944 189 ---SPLKIEVGTT 198 (201)
Q Consensus 189 ---~~~~l~~~l~ 198 (201)
+.+++...|+
T Consensus 169 ~gr~~~EvLr~l~ 181 (219)
T 3tue_A 169 VGRSVEEVLRLLE 181 (219)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4455555544
No 102
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=99.87 E-value=2.1e-22 Score=161.70 Aligned_cols=121 Identities=13% Similarity=0.154 Sum_probs=96.1
Q ss_pred cccceEEecCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHH
Q 028944 45 SIYDFTVKDIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQE 123 (201)
Q Consensus 45 ~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~ 123 (201)
.+|+|+|.|.+|+++++++++||++|++|| ..|||.|..+++.+++ ...++++|++||.| +.+.+++
T Consensus 3 k~p~F~l~~~~G~~~~Lsd~~Gk~vvl~F~p~~~tp~C~~e~~~~~~----~~~~~~~v~gis~D--------~~~~~~~ 70 (322)
T 4eo3_A 3 RVKHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGSTREAVEFSR----ENFEKAQVVGISRD--------SVEALKR 70 (322)
T ss_dssp BCCCCEEEETTSCEEEGGGTTTSEEEEEECSSTTSHHHHHHHHHHHH----SCCTTEEEEEEESC--------CHHHHHH
T ss_pred CCCCcEEECCCcCEEeHHHhCCCeEEEEEECCCCCCCCHHHHHHHHH----HhhCCCEEEEEeCC--------CHHHHHH
Confidence 689999999999999999999999999999 4689889999888764 23457999999976 8999999
Q ss_pred HHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCc
Q 028944 124 VACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSP 190 (201)
Q Consensus 124 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~ 190 (201)
|.++ ++++||++ .|.++... ..|+. .+. -...|++||||++|+|++.+.+-...
T Consensus 71 f~~~-~~l~fp~l--~D~~~~v~-~~ygv--------~~~-~~~~r~tfiId~~G~i~~~~~~v~~~ 124 (322)
T 4eo3_A 71 FKEK-NDLKVTLL--SDPEGILH-EFFNV--------LEN-GKTVRSTFLIDRWGFVRKEWRRVKVE 124 (322)
T ss_dssp HHHH-HTCCSEEE--ECTTCHHH-HHTTC--------EET-TEECCEEEEECTTSBEEEEEESCCST
T ss_pred HHHh-hCCceEEE--EcCchHHH-HhcCC--------CCC-CcCccEEEEECCCCEEEEEEeCCCcc
Confidence 9955 69999999 66665444 33322 111 12358999999999999988765433
No 103
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=99.84 E-value=1.9e-21 Score=142.63 Aligned_cols=131 Identities=10% Similarity=0.039 Sum_probs=100.8
Q ss_pred CCCcccceEEecCCC----------CeeecCCC-CCcE-EEEEEeecCCCCcHH-hHHHHHHHHHHhcCCCe-EEEEeec
Q 028944 42 APKSIYDFTVKDIRG----------NDVSLSGY-RGKV-LLVVNVASKCGLTQS-NYKELNVLYEKYKNQDF-EVLAFPC 107 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G----------~~~~l~~~-~gk~-~lv~f~~~~C~~C~~-~~~~l~~~~~~~~~~~~-~vv~vs~ 107 (201)
.|+++|++++....+ +.++++++ +||+ +|++||+.|||.|.. +++.+++.+++|+++|+ +|++||.
T Consensus 12 ~~~~~p~~~~~~~~~~~~~~~~~~~~~vsLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~ 91 (176)
T 4f82_A 12 VGDALPDAQLFEFIDDAREGCTLGPNACSVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSV 91 (176)
T ss_dssp TTCBCCCCEEEEEECSCCTTCCSEEEEEEHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred cCCcCCceEEEEecccccccccCCceEEeHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 899999988766533 57899997 9985 566888999999999 99999999999999999 9999998
Q ss_pred CCCCCCCCCCHHHHHHHHHhhcCcc--cceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecC
Q 028944 108 NQFAGQEPGSNEEIQEVACTMFKAE--FPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYA 185 (201)
Q Consensus 108 d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~ 185 (201)
| ++..+++|.++ ++++ ||++ .|.++... +.|+..... +..|.++...+++||| ++|+|++.+.
T Consensus 92 D--------~~~~~~~f~~~-~~l~~~f~lL--sD~~~~va-~ayGv~~~~--~~~G~g~~s~R~tfII-~dG~I~~~~~ 156 (176)
T 4f82_A 92 N--------DAFVMGAWGRD-LHTAGKVRMM--ADGSAAFT-HALGLTQDL--SARGMGIRSLRYAMVI-DGGVVKTLAV 156 (176)
T ss_dssp S--------CHHHHHHHHHH-TTCTTTSEEE--ECTTCHHH-HHHTCEEEC--GGGTCCEEECCEEEEE-ETTEEEEEEE
T ss_pred C--------CHHHHHHHHHH-hCCCCCceEE--EcCchHHH-HHhCCCccc--cccCCCcccccEEEEE-cCCEEEEEEE
Confidence 7 89999999955 5888 9999 56655443 334332110 0011133455899999 9999999876
Q ss_pred CC
Q 028944 186 PT 187 (201)
Q Consensus 186 g~ 187 (201)
++
T Consensus 157 ~~ 158 (176)
T 4f82_A 157 EA 158 (176)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 104
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=99.78 E-value=1.5e-19 Score=133.74 Aligned_cols=130 Identities=10% Similarity=0.098 Sum_probs=98.0
Q ss_pred CCCcccceEEec--C---------CC----CeeecCC-CCCcEEEEEEe-ecCCCCcH-HhHHHHHHHHHHh-cCCCeE-
Q 028944 42 APKSIYDFTVKD--I---------RG----NDVSLSG-YRGKVLLVVNV-ASKCGLTQ-SNYKELNVLYEKY-KNQDFE- 101 (201)
Q Consensus 42 ~~~~~p~f~l~~--~---------~G----~~~~l~~-~~gk~~lv~f~-~~~C~~C~-~~~~~l~~~~~~~-~~~~~~- 101 (201)
.|+.+|+|++.+ . +| +.+++++ ++||++|++|+ ..|||.|. .+++.+++.++++ ++.|+.
T Consensus 3 vGd~aPdf~l~~~~~~~~~~~~~~~G~~~~~~v~l~d~~~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~ 82 (182)
T 1xiy_A 3 ENDLIPNVKVMIDVRNMNNISDTDGSPNDFTSIDTHELFNNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDD 82 (182)
T ss_dssp TTCBCCCCEEEEEHHHHTC--------CCEEEEEHHHHSTTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSE
T ss_pred CCCCCCCeEEEcccccccccccccCCCccceeEeHHHHhCCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcE
Confidence 789999999998 4 67 7899998 69988777666 57999999 9999999999999 999995
Q ss_pred EEEeecCCCCCCCCCCHHHHHHHHHhhcCc-ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcE
Q 028944 102 VLAFPCNQFAGQEPGSNEEIQEVACTMFKA-EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKV 180 (201)
Q Consensus 102 vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i 180 (201)
|++||.| ++..+++|.++ ++. +|+++ .|.++... +.|+..... ...|.++.....+|||| +|+|
T Consensus 83 V~gvS~D--------~~~~~~~~~~~-~~~~~f~lL--sD~~~~~a-~~yGv~~~~--~~~G~g~~~~R~tfvId-dG~V 147 (182)
T 1xiy_A 83 IYCITNN--------DIYVLKSWFKS-MDIKKIKYI--SDGNSSFT-DSMNMLVDK--SNFFMGMRPWRFVAIVE-NNIL 147 (182)
T ss_dssp EEEEESS--------CHHHHHHHHHH-TTCCSSEEE--ECTTSHHH-HHTTCEEEC--GGGTCCEEECCEEEEEE-TTEE
T ss_pred EEEEeCC--------CHHHHHHHHHH-cCCCCceEE--EeCchHHH-HHhCCceec--cccCCCCceEEEEEEEc-CCEE
Confidence 9999977 89999999955 588 69999 56554443 334332111 00111223457889999 9999
Q ss_pred EEecCC
Q 028944 181 VERYAP 186 (201)
Q Consensus 181 ~~~~~g 186 (201)
++.+..
T Consensus 148 ~~~~v~ 153 (182)
T 1xiy_A 148 VKMFQE 153 (182)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 998643
No 105
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=99.78 E-value=2.3e-19 Score=131.21 Aligned_cols=133 Identities=13% Similarity=0.169 Sum_probs=100.9
Q ss_pred cCCCcccceEEecCCC-CeeecCC-CCCcEEEEEEee-cCCCCcHHhHHHHHHHHHHhcCCCeE-EEEeecCCCCCCCCC
Q 028944 41 EAPKSIYDFTVKDIRG-NDVSLSG-YRGKVLLVVNVA-SKCGLTQSNYKELNVLYEKYKNQDFE-VLAFPCNQFAGQEPG 116 (201)
Q Consensus 41 ~~~~~~p~f~l~~~~G-~~~~l~~-~~gk~~lv~f~~-~~C~~C~~~~~~l~~~~~~~~~~~~~-vv~vs~d~~~~~~~~ 116 (201)
+.|+.+|+|++.+..+ +.+++++ ++||++|++|+. .|||.|..+++.+++.+++++++|++ |++||.|
T Consensus 15 ~vGd~aPdf~l~~~g~~~~v~L~d~~~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D-------- 86 (171)
T 2xhf_A 15 KVGDIIPDVLVYEDVPSKSFPIHDVFRGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVN-------- 86 (171)
T ss_dssp CTTCBCCCCEEECSSTTCEEETHHHHTTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESS--------
T ss_pred cCcCCCCCeEEecCCCCcEEEhHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCC--------
Confidence 3899999999995432 8999999 499988887774 79999999999999999999999996 9999987
Q ss_pred CHHHHHHHHHhhcCc--ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC
Q 028944 117 SNEEIQEVACTMFKA--EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT 188 (201)
Q Consensus 117 ~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~ 188 (201)
++..+++|.++ .++ +|+++ .|.++... +.|+...... ..|.+......+|||| +|+|++.+....
T Consensus 87 ~~~~~~~w~~~-~~~~~~f~lL--SD~~~~~a-~ayGv~~~~~--~~g~g~~~~R~tfvId-dG~V~~~~v~~~ 153 (171)
T 2xhf_A 87 DPFVMAAWGKT-VDPEHKIRML--ADMHGEFT-RALGTELDSS--KMLGNNRSRRYAMLID-DNKIRSVSTEPD 153 (171)
T ss_dssp CHHHHHHHHHH-HCTTCCSEEE--ECTTSHHH-HHHTCBCCCH--HHHSSCCBCCEEEEEE-TTEEEEEEETTS
T ss_pred CHHHHHHHHHh-cCCCCCeEEE--EeCCchHH-HHhCCceecc--ccCCCcceEEEEEEEe-CCEEEEEEEeCC
Confidence 89999999965 588 89999 56554443 3444332110 0011122346789999 999999876554
No 106
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.73 E-value=4.6e-18 Score=118.18 Aligned_cols=109 Identities=14% Similarity=0.060 Sum_probs=84.3
Q ss_pred cccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEee--cCCCCCCCCCCHHHHH
Q 028944 45 SIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFP--CNQFAGQEPGSNEEIQ 122 (201)
Q Consensus 45 ~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs--~d~~~~~~~~~~~~~~ 122 (201)
.+++++..+.+|........+||++||+||++||++|+.+.|.+.++.++++ .++.++.|+ .| . -.
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~-~~v~~~~v~~~~d--------~---~~ 72 (126)
T 2l57_A 5 GIKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKERE-GKFNIYYARLEEE--------K---NI 72 (126)
T ss_dssp CSSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSS-SSCEEEEEETTSS--------H---HH
T ss_pred ccCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhc-CCeEEEEEeCCCC--------c---hH
Confidence 4556666666666555566678999999999999999999999999999997 469999998 44 1 11
Q ss_pred HHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 123 EVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 123 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+.. +. +++..+|+++++|++|+++.++.|..+.+++.+.|++.
T Consensus 73 ~~~-~~----------------------------------~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 115 (126)
T 2l57_A 73 DLA-YK----------------------------------YDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSL 115 (126)
T ss_dssp HHH-HH----------------------------------TTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHH
T ss_pred HHH-HH----------------------------------cCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHH
Confidence 112 11 14555599999999999999999999888888877653
No 107
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.73 E-value=5.6e-19 Score=124.42 Aligned_cols=114 Identities=12% Similarity=0.063 Sum_probs=86.8
Q ss_pred CCCcccceE-EecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 42 APKSIYDFT-VKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 42 ~~~~~p~f~-l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
.+..+|+|+ +.+.++....+++.+||++||+||++||++|+.+.+.+ .++.++++ ++.++.|+.+. .
T Consensus 6 ~~~~~~~f~~~~~~~~~~~~l~~~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~--~~~~~~vd~~~-------~ 76 (134)
T 2fwh_A 6 QTQTHLNFTQIKTVDELNQALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA--DTVLLQANVTA-------N 76 (134)
T ss_dssp ----CCCCEECCSHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT--TSEEEEEECTT-------C
T ss_pred ccccCCCcEEecCHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc--CcEEEEEeCCC-------C
Confidence 567788998 66666766777777899999999999999999999998 89988886 49999998762 2
Q ss_pred HHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEE--EecCCCCCchhhhh
Q 028944 118 NEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVV--ERYAPTTSPLKIEV 195 (201)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~--~~~~g~~~~~~l~~ 195 (201)
.+...+.. ++ +++..+|+++++|++|+++ .++.|..+.+++++
T Consensus 77 ~~~~~~l~-~~----------------------------------~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~ 121 (134)
T 2fwh_A 77 DAQDVALL-KH----------------------------------LNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSA 121 (134)
T ss_dssp CHHHHHHH-HH----------------------------------TTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHH
T ss_pred cchHHHHH-HH----------------------------------cCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHH
Confidence 22333333 22 1455559999999999998 78999999998888
Q ss_pred cccC
Q 028944 196 GTTI 199 (201)
Q Consensus 196 ~l~~ 199 (201)
.|++
T Consensus 122 ~l~~ 125 (134)
T 2fwh_A 122 HLRD 125 (134)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 108
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.70 E-value=3.5e-17 Score=115.81 Aligned_cols=103 Identities=17% Similarity=0.092 Sum_probs=84.4
Q ss_pred EecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 51 VKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 51 l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
+.+.+|...++++++|+++||+||++||++|+.+.|.+.++.+++.++ +.++.|+.|. .. +.. ++
T Consensus 36 l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~-- 100 (141)
T 3hxs_A 36 IADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK-IYIYKVNVDK-------EP----ELA-RD-- 100 (141)
T ss_dssp TCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH--
T ss_pred hhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc-eEEEEEECCC-------CH----HHH-HH--
Confidence 566788889999999999999999999999999999999999999864 9999998762 22 112 11
Q ss_pred cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 131 AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 131 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
++|..+|+++++|++|+++ ++.|..+.+++.+.|+++|
T Consensus 101 --------------------------------~~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 101 --------------------------------FGIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp --------------------------------TTCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTT
T ss_pred --------------------------------cCCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHH
Confidence 1455559999999999998 7889888888988887654
No 109
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.68 E-value=9.5e-17 Score=111.93 Aligned_cols=107 Identities=15% Similarity=0.114 Sum_probs=82.4
Q ss_pred CCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHH
Q 028944 43 PKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQ 122 (201)
Q Consensus 43 ~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~ 122 (201)
..++|+++ +.+++.++....+||++||.||++||++|+.+.|.+.++.+++++ ++.++.|+.|. ..
T Consensus 21 ~~~~~~~~--~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~-~v~~~~vd~d~-------~~---- 86 (128)
T 3ul3_B 21 FKKVPRLQ--QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGK-RIYLLKVDLDK-------NE---- 86 (128)
T ss_dssp -----CCC--CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG-GEEEEEEEGGG-------CH----
T ss_pred hccCCccc--cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcC-CeEEEEEECCC-------CH----
Confidence 34566665 556667777778899999999999999999999999999999985 59999998762 11
Q ss_pred HHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 123 EVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 123 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+.. ++ ++|..+|+++++ ++|+++.++.|..+.+++.+.|++
T Consensus 87 ~l~-~~----------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 87 SLA-RK----------------------------------FSVKSLPTIILL-KNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp HHH-HH----------------------------------TTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHTT
T ss_pred HHH-HH----------------------------------cCCCCcCEEEEE-ECCEEEEEecCCCCHHHHHHHHHh
Confidence 111 11 145555999999 799999999999999999988875
No 110
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.64 E-value=3.6e-17 Score=117.85 Aligned_cols=119 Identities=8% Similarity=-0.025 Sum_probs=82.4
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEe-ecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecCCCCCCCCCC
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNV-ASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCNQFAGQEPGS 117 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~-~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d~~~~~~~~~ 117 (201)
.+...+++ +..|+.+++++.+||++||+|| ++||++|+.+.|.+ .++.+.+. .++.++.|+.+. ..
T Consensus 26 ~~~~~~~~---~~~~~~~~~a~~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~-~~~~~v~vd~~~------~~ 95 (154)
T 2ju5_A 26 IAAANLQW---ESYAEALEHSKQDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAG-VHLHMVEVDFPQ------KN 95 (154)
T ss_dssp SCCCCCCE---ECHHHHHHHHHHHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHH-HHCEEEEEECCS------SC
T ss_pred cccCCCCC---CCHHHHHHHHHhCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhc-CcEEEEEecCcc------cc
Confidence 34445555 4457778888888999999999 99999999999999 77765553 358999998762 11
Q ss_pred HHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC--Cchhhhh
Q 028944 118 NEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT--SPLKIEV 195 (201)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~--~~~~l~~ 195 (201)
+++++.. +.+ ..+... ++|..+|+++++|++|+++.++ |.. +.+++.+
T Consensus 96 ------------~~~~~~~---~~~----~~l~~~----------~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~ 145 (154)
T 2ju5_A 96 ------------HQPEEQR---QKN----QELKAQ----------YKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVS 145 (154)
T ss_dssp ------------CCCHHHH---HHH----HHHHHH----------TTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHH
T ss_pred ------------CCChhhH---hhH----HHHHHH----------cCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHH
Confidence 1111111 000 011100 2666779999999999999999 888 7777777
Q ss_pred cccCC
Q 028944 196 GTTIP 200 (201)
Q Consensus 196 ~l~~l 200 (201)
.|+++
T Consensus 146 ~l~~~ 150 (154)
T 2ju5_A 146 KVKSA 150 (154)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76543
No 111
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.59 E-value=1e-15 Score=109.19 Aligned_cols=111 Identities=12% Similarity=0.053 Sum_probs=87.2
Q ss_pred CCCcccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHH
Q 028944 42 APKSIYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEI 121 (201)
Q Consensus 42 ~~~~~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~ 121 (201)
.+.++++..+.+.++..+.....+++++||+||++||++|+.+.|.++++.+++.++ +.++.|+.|. ..
T Consensus 31 ~~~~~~~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~-~~~~~vd~~~-------~~--- 99 (148)
T 3p2a_A 31 CGHSLFDGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK-VRFVKVNTEA-------EP--- 99 (148)
T ss_dssp TCCBTTCCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH---
T ss_pred cCCccccCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-eEEEEEECcC-------CH---
Confidence 456778888888888887644467899999999999999999999999999999764 9999998762 22
Q ss_pred HHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 122 QEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+.. ++ ++|..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 100 -~l~-~~----------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 141 (148)
T 3p2a_A 100 -ALS-TR----------------------------------FRIRSIPTIMLY-RNGKMIDMLNGAVPKAPFDNWLDEQ 141 (148)
T ss_dssp -HHH-HH----------------------------------TTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred -HHH-HH----------------------------------CCCCccCEEEEE-ECCeEEEEEeCCCCHHHHHHHHHHH
Confidence 111 11 144555998887 6999999999999988888877643
No 112
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.57 E-value=2.5e-15 Score=100.61 Aligned_cols=89 Identities=19% Similarity=0.120 Sum_probs=72.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.+++++|.||++||++|+...|.++++.++++++ +.++.|+.|. +.+ .. ++
T Consensus 16 ~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~~----~~-~~---------------- 66 (105)
T 1nsw_A 16 GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-VTVAKLNVDE-------NPE----TT-SQ---------------- 66 (105)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT-CEEEEEETTT-------CHH----HH-HH----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC-cEEEEEECcC-------CHH----HH-HH----------------
Confidence 5689999999999999999999999999999764 9999998762 211 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++.++|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 67 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 67 ------------------FGIMSIPTLILF-KGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred ------------------cCCccccEEEEE-eCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 145555999999 89999999999998889999988765
No 113
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.57 E-value=3.6e-16 Score=114.38 Aligned_cols=117 Identities=9% Similarity=0.086 Sum_probs=70.1
Q ss_pred eecCCCCCcEEEEEEeecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccce
Q 028944 59 VSLSGYRGKVLLVVNVASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPI 135 (201)
Q Consensus 59 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (201)
+..+..+||++||+||++||++|+.+.+.+ .++.+.+.+ ++.++.|++|. .. ++. + .+..
T Consensus 40 ~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~-~~~~v~v~~d~------~~--~~~----~----~~~~ 102 (172)
T 3f9u_A 40 MEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINN-DYVLITLYVDN------KT--PLT----E----PVKI 102 (172)
T ss_dssp HHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHH-HCEEEEEETTC------CC--EEE----E----EEEE
T ss_pred HHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcC-CEEEEEEecCc------cc--ccc----h----hhhh
Confidence 333445799999999999999999864433 455555543 59999999873 11 000 0 0000
Q ss_pred eeeeccCCCCchhh---HHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCC-chhhhhcccC
Q 028944 136 FDKIDVNGKNAAPI---YKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTS-PLKIEVGTTI 199 (201)
Q Consensus 136 ~~~~d~~~~~~~~~---~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~-~~~l~~~l~~ 199 (201)
. .+......... ...+.... +++..+|+++++|++|+++.++.|..+ .+++.+.|++
T Consensus 103 ~--~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~ 163 (172)
T 3f9u_A 103 M--ENGTERTLRTVGDKWSYLQRVK-----FGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQT 163 (172)
T ss_dssp E--ETTEEEEEEEHHHHHHHHHHHH-----HSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHH
T ss_pred h--hcchhhhhhhhhhhhhHHHHHH-----cCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHH
Confidence 0 00000000000 00000000 367788999999999999999999997 7777776654
No 114
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.57 E-value=1.1e-15 Score=107.01 Aligned_cols=95 Identities=19% Similarity=0.059 Sum_probs=70.3
Q ss_pred CCCcEEEEEEeecCCCCcHHhHHHHH--HHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeecc
Q 028944 64 YRGKVLLVVNVASKCGLTQSNYKELN--VLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDV 141 (201)
Q Consensus 64 ~~gk~~lv~f~~~~C~~C~~~~~~l~--~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 141 (201)
.+||++||+||++||++|+.+.|.+. ++.+++.+ ++.++.|+++. .++..+.. ++|++.+.
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~-~~~~~~vd~~~--------~~~~~~l~-~~~~v~~~------- 89 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK-HFEVVKIDVGN--------FDRNLELS-QAYGDPIQ------- 89 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH-HCEEEEEECTT--------TTSSHHHH-HHTTCGGG-------
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC-CEEEEEEeCCc--------ccchHHHH-HHhCCccC-------
Confidence 45899999999999999999999999 99998864 49999998741 01111222 22232210
Q ss_pred CCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCC-------CCCchhhhhcccC
Q 028944 142 NGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAP-------TTSPLKIEVGTTI 199 (201)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g-------~~~~~~l~~~l~~ 199 (201)
..+|+++++|++|+++.++.| ..+.+++.+.|++
T Consensus 90 ------------------------~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 90 ------------------------DGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp ------------------------GCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred ------------------------CccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 444999999999999999888 5667777777654
No 115
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.57 E-value=2.3e-15 Score=102.36 Aligned_cols=89 Identities=18% Similarity=0.164 Sum_probs=72.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
++++++|+||++||++|+...|.+.++.+++++ ++.++.|+.|. +.+ .. ++
T Consensus 16 ~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~-~v~~~~vd~~~-------~~~----l~-~~---------------- 66 (112)
T 2voc_A 16 SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGD-KLKIVKIDVDE-------NQE----TA-GK---------------- 66 (112)
T ss_dssp SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTT-TCEEEEEETTT-------CCS----HH-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCC-CcEEEEEECCC-------CHH----HH-HH----------------
Confidence 789999999999999999999999999999976 49999998762 110 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.+++.+
T Consensus 67 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~~ 104 (112)
T 2voc_A 67 ------------------YGVMSIPTLLVL-KDGEVVETSVGFKPKEALQELVNKHL 104 (112)
T ss_dssp ------------------TTCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTS
T ss_pred ------------------cCCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 255556999999 99999999999999998988887653
No 116
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.57 E-value=5.8e-15 Score=98.86 Aligned_cols=89 Identities=17% Similarity=0.163 Sum_probs=73.0
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
++++++|.||++||++|+...|.+.++.++++++ +.++.|+.|. +++ .. ++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~~---------------- 68 (106)
T 3die_A 18 ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK-ADILKLDVDE-------NPS----TA-AK---------------- 68 (106)
T ss_dssp CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CHH----HH-HH----------------
T ss_pred cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-cEEEEEECCc-------CHH----HH-Hh----------------
Confidence 7899999999999999999999999999999875 9999998762 221 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|++++++ +|+++.++.|..+.+++.+.|+++|
T Consensus 69 ------------------~~v~~~Pt~~~~~-~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 69 ------------------YEVMSIPTLIVFK-DGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp ------------------TTCCSBSEEEEEE-TTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred ------------------CCCcccCEEEEEe-CCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 1445559988885 9999999999999999999998875
No 117
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.56 E-value=3.5e-15 Score=100.63 Aligned_cols=87 Identities=15% Similarity=0.154 Sum_probs=66.8
Q ss_pred CCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccC
Q 028944 63 GYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVN 142 (201)
Q Consensus 63 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 142 (201)
+..+|++||+||++||++|+...|.+.++.+++++ +.++.|++|. .++ .. ++
T Consensus 17 ~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~--~~~~~vd~d~-------~~~----l~-~~-------------- 68 (105)
T 3zzx_A 17 EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD--VVFLKVDVDE-------CED----IA-QD-------------- 68 (105)
T ss_dssp HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEETTT-------CHH----HH-HH--------------
T ss_pred hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC--eEEEEEeccc-------CHH----HH-HH--------------
Confidence 34579999999999999999999999999998864 8888888762 221 11 21
Q ss_pred CCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 143 GKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|.++|+++++ ++|+++.++.|. +++++++.|++
T Consensus 69 --------------------~~V~~~PT~~~~-~~G~~v~~~~G~-~~~~l~~~i~k 103 (105)
T 3zzx_A 69 --------------------NQIACMPTFLFM-KNGQKLDSLSGA-NYDKLLELVEK 103 (105)
T ss_dssp --------------------TTCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred --------------------cCCCeecEEEEE-ECCEEEEEEeCc-CHHHHHHHHHh
Confidence 255666986665 799999999995 67888887753
No 118
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.56 E-value=3.1e-15 Score=102.46 Aligned_cols=88 Identities=23% Similarity=0.230 Sum_probs=70.3
Q ss_pred CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCC
Q 028944 64 YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNG 143 (201)
Q Consensus 64 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 143 (201)
.+++++||+||++||++|+.+.|.+.++.+++++ +.++.|+.|. .. +.. ++
T Consensus 29 ~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~--v~~~~vd~d~-------~~----~l~-~~--------------- 79 (116)
T 3qfa_C 29 AGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN--VIFLEVDVDD-------CQ----DVA-SE--------------- 79 (116)
T ss_dssp HTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--SEEEEEETTT-------TH----HHH-HH---------------
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHH-HH---------------
Confidence 3689999999999999999999999999999865 9999998762 11 112 11
Q ss_pred CCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 144 KNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
++|..+|+++++ ++|+++.++.|. +.+++++.|+++|
T Consensus 80 -------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 116 (116)
T 3qfa_C 80 -------------------CEVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 116 (116)
T ss_dssp -------------------TTCCSSSEEEEE-SSSSEEEEEESC-CHHHHHHHHHHHC
T ss_pred -------------------cCCccccEEEEE-eCCeEEEEEcCC-CHHHHHHHHHHhC
Confidence 145555997777 899999999998 8889998887654
No 119
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.55 E-value=1.5e-15 Score=110.86 Aligned_cols=83 Identities=13% Similarity=0.040 Sum_probs=62.1
Q ss_pred ecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeee
Q 028944 60 SLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKI 139 (201)
Q Consensus 60 ~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (201)
.+++++|+++||+||++|||+|+.+.|.|++++++++ ++.++.|+.| +-.+.+ ++|+.
T Consensus 48 ~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~--~v~~~~v~~d-----------~~~~~~-~~~~~-------- 105 (167)
T 1z6n_A 48 RLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP--NIELAIISKG-----------RAEDDL-RQRLA-------- 105 (167)
T ss_dssp HHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT--TEEEEEECHH-----------HHHHHT-TTTTT--------
T ss_pred HHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CcEEEEEECC-----------CCHHHH-HHHHH--------
Confidence 3566789999999999999999999999999999875 4899988654 222222 11110
Q ss_pred ccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC
Q 028944 140 DVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT 188 (201)
Q Consensus 140 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~ 188 (201)
.++.++|+++++|++|+++.++ |..
T Consensus 106 -----------------------~~v~~iPt~i~~~~~G~~~~~~-g~~ 130 (167)
T 1z6n_A 106 -----------------------LERIAIPLVLVLDEEFNLLGRF-VER 130 (167)
T ss_dssp -----------------------CSSCCSSEEEEECTTCCEEEEE-ESS
T ss_pred -----------------------cCCCCcCeEEEECCCCCEEEEE-cCC
Confidence 1355569999999999998887 444
No 120
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.55 E-value=9.3e-15 Score=98.13 Aligned_cols=88 Identities=19% Similarity=0.217 Sum_probs=69.3
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
++++++|+||++||++|+...|.++++.++++ ++.++.|+.|. .+ +.. ++
T Consensus 17 ~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~--~~~~~~vd~~~-------~~----~l~-~~---------------- 66 (105)
T 4euy_A 17 EQQLVLLFIKTENCGVCDVMLRKVNYVLENYN--YVEKIEILLQD-------MQ----EIA-GR---------------- 66 (105)
T ss_dssp CSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT--TEEEEEEEECC-------C---------------------------
T ss_pred cCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC--CceEEEEECCC-------CH----HHH-Hh----------------
Confidence 57899999999999999999999999999984 59999998762 11 011 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
++|..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 67 ------------------~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 67 ------------------YAVFTGPTVLLF-YNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp ---------------------CCCCEEEEE-ETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred ------------------cCCCCCCEEEEE-eCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 155566998888 59999999999999999999988764
No 121
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.54 E-value=1.6e-14 Score=99.22 Aligned_cols=101 Identities=13% Similarity=-0.010 Sum_probs=76.0
Q ss_pred EecCCCCeeecC-CCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC----CCeEEEEeecCCCCCCCCCCHHHHHHHH
Q 028944 51 VKDIRGNDVSLS-GYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKN----QDFEVLAFPCNQFAGQEPGSNEEIQEVA 125 (201)
Q Consensus 51 l~~~~G~~~~l~-~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~vv~vs~d~~~~~~~~~~~~~~~~~ 125 (201)
+.+.++..+... .-+++++||+||++||++|+.+.|.++++.+++++ .++.++.|+.+.
T Consensus 9 v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~---------------- 72 (121)
T 2djj_A 9 VTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSEFKDRVVIAKVDATA---------------- 72 (121)
T ss_dssp SEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSSCTTSSEEEEEETTT----------------
T ss_pred eEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcccCCceEEEEEECcc----------------
Confidence 445566666543 24679999999999999999999999999999986 258888887651
Q ss_pred HhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcE-EEecCCCCCchhhhhcccCC
Q 028944 126 CTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKV-VERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 126 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~l 200 (201)
. . + . . ++..+|++++++++|++ +.++.|..+.+++.+.|++.
T Consensus 73 --~-~-----~--~--~---------------------~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~ 115 (121)
T 2djj_A 73 --N-D-----V--P--D---------------------EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAEN 115 (121)
T ss_dssp --S-C-----C--S--S---------------------CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHT
T ss_pred --c-c-----c--c--c---------------------ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhc
Confidence 1 0 1 0 0 23334999999988885 66789988888888887654
No 122
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.53 E-value=1.7e-14 Score=96.80 Aligned_cols=89 Identities=20% Similarity=0.171 Sum_probs=70.3
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.+++++|.||++||++|+...|.+.++.++++++ +.++.|+.|. +++ .. ++
T Consensus 18 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~~---------------- 68 (107)
T 1dby_A 18 SSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK-LKCVKLNTDE-------SPN----VA-SE---------------- 68 (107)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CHH----HH-HH----------------
T ss_pred CCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc-eEEEEEECCC-------CHH----HH-HH----------------
Confidence 4789999999999999999999999999999764 9999998762 211 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 69 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 69 ------------------YGIRSIPTIMVF-KGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp ------------------HTCCSSCEEEEE-SSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred ------------------CCCCcCCEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 144455997666 79999999999998888888887654
No 123
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.53 E-value=9.6e-15 Score=98.87 Aligned_cols=87 Identities=18% Similarity=0.250 Sum_probs=68.8
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
++|++||+||++||++|+.+.|.++++.+++++ +.++.|+.|. .. +.. ++
T Consensus 23 ~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~--~~~~~vd~~~-------~~----~l~-~~---------------- 72 (109)
T 3f3q_A 23 QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ--ADFYKLDVDE-------LG----DVA-QK---------------- 72 (109)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHH-HH----------------
Confidence 579999999999999999999999999999864 8888888761 11 112 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
++|..+|++++++ +|+++.++.|. +++++++.|+++|
T Consensus 73 ------------------~~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~l 109 (109)
T 3f3q_A 73 ------------------NEVSAMPTLLLFK-NGKEVAKVVGA-NPAAIKQAIAANA 109 (109)
T ss_dssp ------------------TTCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred ------------------cCCCccCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHhhC
Confidence 1455559988887 99999999998 5688988887654
No 124
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.53 E-value=4.4e-15 Score=99.87 Aligned_cols=89 Identities=17% Similarity=0.149 Sum_probs=71.8
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
++++++|.||++||++|+...|.+.++.++++++ +.++.|+.|. .++ .. ++
T Consensus 20 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~~---------------- 70 (109)
T 3tco_A 20 NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK-AVFGRLNVDE-------NQK----IA-DK---------------- 70 (109)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------CHH----HH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC-ceEEEEcccc-------CHH----HH-Hh----------------
Confidence 5799999999999999999999999999999864 8999998762 221 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 71 ------------------~~i~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 71 ------------------YSVLNIPTTLIF-VNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred ------------------cCcccCCEEEEE-cCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 144555999999 99999999999999998988887653
No 125
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.53 E-value=7.1e-15 Score=103.44 Aligned_cols=87 Identities=17% Similarity=0.128 Sum_probs=69.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||+||++||++|+.+.|.+.++.++++++ +.++.|+.|. .. +.. ++
T Consensus 37 ~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 87 (136)
T 2l5l_A 37 GDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ-IVIYKVDTEK-------EQ----ELA-GA---------------- 87 (136)
T ss_dssp CSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-EEEEEEeCCC-------CH----HHH-HH----------------
Confidence 4689999999999999999999999999999764 9999998762 11 111 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+++..+|+++++|++|+++ .+.|..+.+++.+.|++
T Consensus 88 ------------------~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~ 123 (136)
T 2l5l_A 88 ------------------FGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDE 123 (136)
T ss_dssp ------------------TTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHH
T ss_pred ------------------cCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHH
Confidence 1455559999999999998 67888888888887764
No 126
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.53 E-value=1.1e-14 Score=97.96 Aligned_cols=100 Identities=17% Similarity=0.129 Sum_probs=75.1
Q ss_pred cCCCCeeecC-CCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCc
Q 028944 53 DIRGNDVSLS-GYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKA 131 (201)
Q Consensus 53 ~~~G~~~~l~-~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~ 131 (201)
..++..+... .-.+++++|.||++||++|+...|.+.++.++++++ +.++.|+.+. +++ .. ++
T Consensus 6 ~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~~--- 69 (108)
T 2trx_A 6 HLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG----TA-PK--- 69 (108)
T ss_dssp ECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CTT----HH-HH---
T ss_pred ecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-cEEEEEECCC-------CHH----HH-HH---
Confidence 3444444321 125789999999999999999999999999999764 9999998762 111 11 11
Q ss_pred ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 132 EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 132 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 70 -------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 70 -------------------------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp -------------------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred -------------------------------cCCcccCEEEEE-eCCEEEEEEecCCCHHHHHHHHHHh
Confidence 145556999999 8999999999999888888887654
No 127
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.52 E-value=2.6e-15 Score=104.56 Aligned_cols=97 Identities=16% Similarity=0.224 Sum_probs=70.3
Q ss_pred eeecCCCCCcEEEEEEeecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccc
Q 028944 58 DVSLSGYRGKVLLVVNVASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFP 134 (201)
Q Consensus 58 ~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (201)
.+++++.+||++||+||++||++|+.+.+.+ .++.+.+.. ++.++.|+.+. +. -.+.. +.
T Consensus 19 ~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~------~~---~~~~~-~~------ 81 (130)
T 2kuc_A 19 ALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNR-HFVNLKMDMEK------GE---GVELR-KK------ 81 (130)
T ss_dssp HHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHH-HSEEEEECSSS------TT---HHHHH-HH------
T ss_pred HHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhc-CeEEEEEecCC------cc---hHHHH-HH------
Confidence 3444445789999999999999999999998 666555543 47777776551 11 11112 11
Q ss_pred eeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 135 IFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 135 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+++..+|+++++|++|+++.++.|..+.+++.+.|++
T Consensus 82 ----------------------------~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~ 118 (130)
T 2kuc_A 82 ----------------------------YGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKL 118 (130)
T ss_dssp ----------------------------TTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHH
T ss_pred ----------------------------cCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHH
Confidence 1455559999999999999999999888888887764
No 128
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.52 E-value=3.4e-14 Score=98.81 Aligned_cols=88 Identities=16% Similarity=0.050 Sum_probs=69.0
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||+||++||++|+.+.|.+.++.++++++ +.++.|+.|. .. +.. ++
T Consensus 34 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~-~~~~~vd~~~-------~~----~l~-~~---------------- 84 (130)
T 2dml_A 34 SDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV-VKVGAVNADK-------HQ----SLG-GQ---------------- 84 (130)
T ss_dssp CSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT-SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc-eEEEEEeCCC-------CH----HHH-HH----------------
Confidence 4689999999999999999999999999999764 8899988761 11 111 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|..+|++++++++|+++..+.|..+.+++.+.+.+
T Consensus 85 ------------------~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~ 121 (130)
T 2dml_A 85 ------------------YGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALS 121 (130)
T ss_dssp ------------------HTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHH
T ss_pred ------------------cCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHH
Confidence 1455559999999999877788998888887776643
No 129
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.52 E-value=1.9e-14 Score=100.39 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=75.1
Q ss_pred CCCeeecCC-CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCccc
Q 028944 55 RGNDVSLSG-YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEF 133 (201)
Q Consensus 55 ~G~~~~l~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (201)
++..+...- -+++++||.||++||++|+...|.++++.++++++ +.++.|+.|. ..
T Consensus 28 ~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~~~-------~~--------------- 84 (128)
T 2o8v_B 28 TDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP--------------- 84 (128)
T ss_dssp CTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT-EEEEEEETTT-------CC---------------
T ss_pred ChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEECCC-------CH---------------
Confidence 444554221 25789999999999999999999999999999764 9999998762 10
Q ss_pred ceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 134 PIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 134 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
..... +++..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 85 ----------~l~~~--------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 85 ----------GTAPK--------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp ----------TTSGG--------------GTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred ----------HHHHH--------------cCCCccCEEEEE-eCCEEEEEEcCCCCHHHHHHHHHHh
Confidence 00011 256666999999 8999999999999888888887654
No 130
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.52 E-value=4.3e-15 Score=106.44 Aligned_cols=87 Identities=8% Similarity=-0.021 Sum_probs=67.7
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++++||+||++||++|+.+.|.+.++.++++++ +.++.|++|. .++ .. ++
T Consensus 22 ~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-~~~~~vd~d~-------~~~----l~-~~---------------- 72 (149)
T 3gix_A 22 AEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-AAIYLVDVDQ-------TAV----YT-QY---------------- 72 (149)
T ss_dssp CSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT-EEEEEEETTT-------CCH----HH-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCc-------CHH----HH-HH----------------
Confidence 4799999999999999999999999999999765 9999998762 111 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEE---------EecCC-CCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVV---------ERYAP-TTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~---------~~~~g-~~~~~~l~~~l~~ 199 (201)
++|..+|+++ ++++|+++ .++.| ..+.+++.+.|++
T Consensus 73 ------------------~~v~~~Pt~~-~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~ 118 (149)
T 3gix_A 73 ------------------FDISYIPSTV-FFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEV 118 (149)
T ss_dssp ------------------TTCCSSSEEE-EEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHH
T ss_pred ------------------cCCCccCeEE-EEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHH
Confidence 1455559987 77899999 78888 7777777777654
No 131
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.52 E-value=2.4e-15 Score=105.60 Aligned_cols=100 Identities=12% Similarity=0.039 Sum_probs=70.5
Q ss_pred EecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 51 VKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 51 l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
+.+.++-.-.+++.+||++||+||++||++|+.+.|.++++.+++ ++.++.|+.|. .. +.. ++
T Consensus 25 l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~---~v~~~~vd~~~-------~~----~l~-~~-- 87 (133)
T 3cxg_A 25 LKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY---YVTLVDIDVDI-------HP----KLN-DQ-- 87 (133)
T ss_dssp CCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE---ECEEEEEETTT-------CH----HHH-HH--
T ss_pred ecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc---CEEEEEEeccc-------hH----HHH-Hh--
Confidence 333333333466677899999999999999999999999887766 48888887651 11 111 11
Q ss_pred cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEE-CCCCc--EEEecCCCCCchhhhhcccCC
Q 028944 131 AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLV-NKEGK--VVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 131 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~li-d~~G~--i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|..+|+++++ |++|+ ++.++.|. +.+++.+.|+++
T Consensus 88 --------------------------------~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~ 127 (133)
T 3cxg_A 88 --------------------------------HNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKY 127 (133)
T ss_dssp --------------------------------TTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHH
T ss_pred --------------------------------cCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHH
Confidence 145555999988 45666 99898887 678888877654
No 132
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.51 E-value=2e-14 Score=97.32 Aligned_cols=91 Identities=22% Similarity=0.230 Sum_probs=68.6
Q ss_pred cCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeec
Q 028944 61 LSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKID 140 (201)
Q Consensus 61 l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 140 (201)
+.+.++++++|.||++||++|+.+.|.+.++.++++ ++.++.|+.++ +.. +.. ++
T Consensus 19 ~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~------~~~----~~~-~~------------ 73 (111)
T 2pu9_C 19 VKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL--DVIFLKLDCNQ------ENK----TLA-KE------------ 73 (111)
T ss_dssp HTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS------TTH----HHH-HH------------
T ss_pred HHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC--CeEEEEEecCc------chH----HHH-HH------------
Confidence 344468999999999999999999999999999986 48999998751 111 111 11
Q ss_pred cCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 141 VNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+ ++++++|+++.++.|.. .+++.+.|+++
T Consensus 74 ----------------------~~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~l~~~ 109 (111)
T 2pu9_C 74 ----------------------LGIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAA 109 (111)
T ss_dssp ----------------------HCCSBSSE-EEEESSSSEEEEEESSC-HHHHHHHHHHH
T ss_pred ----------------------cCCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 14555598 77789999999988875 77788777653
No 133
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.51 E-value=2.7e-14 Score=96.94 Aligned_cols=101 Identities=16% Similarity=0.088 Sum_probs=76.0
Q ss_pred ecCCCCeeecCC-CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 52 KDIRGNDVSLSG-YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 52 ~~~~G~~~~l~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
.+.++..+...- -.++++||.||++|||+|+...|.+.++.++++++ +.++.|+.|. ..+ .. ++
T Consensus 10 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-v~~~~v~~~~-------~~~----~~-~~-- 74 (115)
T 1thx_A 10 ITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR-LKVVKLEIDP-------NPT----TV-KK-- 74 (115)
T ss_dssp EECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT-CEEEEEESTT-------CHH----HH-HH--
T ss_pred EEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc-EEEEEEEcCC-------CHH----HH-HH--
Confidence 334444543221 25789999999999999999999999999999865 9999998762 211 11 11
Q ss_pred cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 131 AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 131 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 75 --------------------------------~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~~ 111 (115)
T 1thx_A 75 --------------------------------YKVEGVPALRLV-KGEQILDSTEGVISKDKLLSFLDTH 111 (115)
T ss_dssp --------------------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred --------------------------------cCCCceeEEEEE-cCCEEEEEecCCCCHHHHHHHHHHH
Confidence 144555999999 8999999999998888888877653
No 134
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.51 E-value=3.2e-14 Score=95.35 Aligned_cols=102 Identities=14% Similarity=0.134 Sum_probs=77.1
Q ss_pred ecCCCCeeecC-CCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 52 KDIRGNDVSLS-GYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 52 ~~~~G~~~~l~-~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
...++..+... .-.++++||.||++||++|+...+.+.++.+++++ ++.++.|+.+. .. +.. ++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~----~~~-~~-- 69 (107)
T 2i4a_A 5 LAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAG-KVTVAKVNIDD-------NP----ETP-NA-- 69 (107)
T ss_dssp EECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT-SEEEEEEETTT-------CC----HHH-HH--
T ss_pred eecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCC-cEEEEEEECCC-------CH----HHH-Hh--
Confidence 34445555322 12578999999999999999999999999999976 59999998762 11 111 11
Q ss_pred cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 131 AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 131 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 70 --------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 70 --------------------------------YQVRSIPTLMLV-RDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp --------------------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred --------------------------------cCCCccCEEEEE-eCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 144555999999 89999999999998899998887654
No 135
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.51 E-value=1.7e-14 Score=99.07 Aligned_cols=88 Identities=15% Similarity=0.112 Sum_probs=70.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||.||++||++|+...+.+.++.+++.+ ++.++.|+.|. .. +.. ++
T Consensus 30 ~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~-~v~~~~vd~d~-------~~----~l~-~~---------------- 80 (119)
T 1w4v_A 30 SETPVVVDFHAQWCGPCKILGPRLEKMVAKQHG-KVVMAKVDIDD-------HT----DLA-IE---------------- 80 (119)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-SSEEEEEETTT-------TH----HHH-HH----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCCC-------CH----HHH-HH----------------
Confidence 478999999999999999999999999999976 49999998762 11 112 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 81 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 81 ------------------YEVSAVPTVLAM-KNGDVVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred ------------------cCCCcccEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 144555998888 8999999999998888888887654
No 136
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.51 E-value=1.8e-14 Score=97.57 Aligned_cols=88 Identities=16% Similarity=0.129 Sum_probs=69.4
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.+++++|.||++||++|+...|.+.++.++++++ +.++.|+.|. +.+ .. ++
T Consensus 22 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~~---------------- 72 (112)
T 1t00_A 22 NDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK-IEIVKLNIDE-------NPG----TA-AK---------------- 72 (112)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CHH----HH-HH----------------
T ss_pred CCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-eEEEEEEcCC-------CHH----HH-Hh----------------
Confidence 4789999999999999999999999999999764 9999998762 211 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 73 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 73 ------------------YGVMSIPTLNVY-QGGEVAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTHHH
T ss_pred ------------------CCCCcccEEEEE-eCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 144555986666 8999999999999888888877654
No 137
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=3.2e-14 Score=98.54 Aligned_cols=99 Identities=13% Similarity=0.066 Sum_probs=72.7
Q ss_pred ecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCc
Q 028944 52 KDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKA 131 (201)
Q Consensus 52 ~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~ 131 (201)
...+...+. ..+++ .+||.||++||++|+.+.|.+.++.+++++.++.++.|+.+. ..+ .. ++
T Consensus 10 ~~l~~~~f~-~~~~~-~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~v~~~~vd~~~-------~~~----~~-~~--- 72 (126)
T 1x5e_A 10 RVITDENWR-ELLEG-DWMIEFYAPWCPACQNLQPEWESFAEWGEDLEVNIAKVDVTE-------QPG----LS-GR--- 72 (126)
T ss_dssp EECCTTTHH-HHTSS-EEEEEEECSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEETTT-------CHH----HH-HH---
T ss_pred EEecHHHHH-HHhCC-CEEEEEECCCCHHHHHHhHHHHHHHHHhccCCeEEEEEECcC-------CHH----HH-HH---
Confidence 334444443 12344 489999999999999999999999999986679999998762 211 11 11
Q ss_pred ccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 132 EFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 132 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|..+|+++++ ++|++ .++.|..+.+++.+.|+++
T Consensus 73 -------------------------------~~v~~~Pt~~~~-~~G~~-~~~~G~~~~~~l~~~l~~~ 108 (126)
T 1x5e_A 73 -------------------------------FIINALPTIYHC-KDGEF-RRYQGPRTKKDFINFISDK 108 (126)
T ss_dssp -------------------------------TTCCSSSEEEEE-ETTEE-EECCSCCCHHHHHHHHHTC
T ss_pred -------------------------------cCCcccCEEEEE-eCCeE-EEeecCCCHHHHHHHHHHH
Confidence 144555999999 89995 6889988888888887664
No 138
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.26 E-value=1.3e-15 Score=106.08 Aligned_cols=101 Identities=15% Similarity=0.087 Sum_probs=76.0
Q ss_pred CCeeecCCCCCcEEEEEEeecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcc
Q 028944 56 GNDVSLSGYRGKVLLVVNVASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAE 132 (201)
Q Consensus 56 G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~ 132 (201)
.+.+++...+||++||+||++||++|+.+.|.+ .++.+.+.+ ++.++.|+.+. . +-.+..
T Consensus 9 ~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~-~~~~~~vd~~~--------~-~~~~~~------- 71 (130)
T 2lst_A 9 PEALALAQAHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA-RFVVASVSVDT--------P-EGQELA------- 71 (130)
Confidence 566777778899999999999999999999999 888877765 47888876541 0 000011
Q ss_pred cceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECC-CCcE--EEecCCCCCchhhhhcccCCC
Q 028944 133 FPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNK-EGKV--VERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 133 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~-~G~i--~~~~~g~~~~~~l~~~l~~ll 201 (201)
.. +++..+|+++++|+ +|++ +.++.|..+.+++.+.|++++
T Consensus 72 ---------------~~-------------~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 72 ---------------RR-------------YRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVC 115 (130)
Confidence 11 25556699999996 6999 889999888888888887653
No 139
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.50 E-value=3.2e-14 Score=99.34 Aligned_cols=103 Identities=17% Similarity=0.098 Sum_probs=72.6
Q ss_pred EecCCCCeeecCCC-CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCC-CeEEEEeecCCCCCCCCCCHHHHHHHHHhh
Q 028944 51 VKDIRGNDVSLSGY-RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQ-DFEVLAFPCNQFAGQEPGSNEEIQEVACTM 128 (201)
Q Consensus 51 l~~~~G~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 128 (201)
+.+.++..+...-. +++++||+||++||++|+.+.|.+.++.++++++ ++.++.|..+. .
T Consensus 9 v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~vd~~~------------------~ 70 (133)
T 2dj3_A 9 VKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQKDLVIAKMDATA------------------N 70 (133)
T ss_dssp SEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTSSSEEEEEECTTT------------------S
T ss_pred eEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCCCCEEEEEecCCc------------------C
Confidence 44555666654333 4899999999999999999999999999999853 58888886541 0
Q ss_pred cCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEE-ecC-CCCCchhhhhcccC
Q 028944 129 FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVE-RYA-PTTSPLKIEVGTTI 199 (201)
Q Consensus 129 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~-~~~-g~~~~~~l~~~l~~ 199 (201)
+.+ ... ++|..+|++++++++|++.. .+. |..+.+++.+.|++
T Consensus 71 -----~~~---------~~~--------------~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~ 115 (133)
T 2dj3_A 71 -----DIT---------NDQ--------------YKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDE 115 (133)
T ss_dssp -----CCC---------CSS--------------CCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHH
T ss_pred -----HHH---------Hhh--------------cCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHH
Confidence 000 000 26667799999998776532 455 55777778777654
No 140
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.50 E-value=5.5e-14 Score=96.29 Aligned_cols=91 Identities=11% Similarity=0.096 Sum_probs=65.9
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.|++++|+||++|||+|+.+.|.+.++.++++. .+..++++. ..+.+...++. ++
T Consensus 28 ~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~---~v~~~~~~~-----~~~~~~~~~~~-~~---------------- 82 (118)
T 1zma_A 28 KKETATFFIGRKTCPYCRKFAGTLSGVVAETKA---HIYFINSEE-----PSQLNDLQAFR-SR---------------- 82 (118)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCC---CCEEEETTC-----GGGHHHHHHHH-HH----------------
T ss_pred CCCeEEEEEECCCCccHHHHHHHHHHHHHhcCC---eEEEEECCC-----cCcHHHHHHHH-HH----------------
Confidence 468999999999999999999999999998863 344444441 01122222332 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|..+|+++++ ++|+++.++.|..+.+++.+.|++
T Consensus 83 ------------------~~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 83 ------------------YGIPTVPGFVHI-TDGQINVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp ------------------HTCCSSCEEEEE-ETTEEEEECCTTCCHHHHHHHHTC
T ss_pred ------------------cCCCCCCeEEEE-ECCEEEEEecCCCCHHHHHHHhhC
Confidence 155566998888 589999999999998888887753
No 141
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.50 E-value=2.3e-14 Score=95.73 Aligned_cols=102 Identities=16% Similarity=0.114 Sum_probs=75.6
Q ss_pred ecCCCCeeecCC-CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 52 KDIRGNDVSLSG-YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 52 ~~~~G~~~~l~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
.+.++..+...- -.+++++|.||++||++|+...|.+.++.++++++ +.++.|+.|. .+ +.. ++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~-~~~~~v~~~~-------~~----~~~-~~-- 67 (105)
T 1fb6_A 3 QDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK-IAVYKLNTDE-------AP----GIA-TQ-- 67 (105)
T ss_dssp EECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CH----HHH-HH--
T ss_pred eechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-eEEEEEcCcc-------hH----HHH-Hh--
Confidence 344555554322 24789999999999999999999999999999764 9999998762 21 112 11
Q ss_pred cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 131 AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 131 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 68 --------------------------------~~v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 68 --------------------------------YNIRSIPTVLFF-KNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp --------------------------------TTCCSSSEEEEE-ETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred --------------------------------CCCCcccEEEEE-eCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 144455986666 79999999999998888988887654
No 142
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.50 E-value=3.2e-14 Score=96.43 Aligned_cols=88 Identities=9% Similarity=0.103 Sum_probs=65.3
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
++++++|.||++||++|+...|.+.++.++++..++.++.|+.+. .. +.. ++
T Consensus 20 ~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~~~-~~---------------- 71 (112)
T 3d6i_A 20 GDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNSNVSFLSIDADE-------NS----EIS-EL---------------- 71 (112)
T ss_dssp TTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGTTSEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEeccc-------CH----HHH-HH----------------
Confidence 478999999999999999999999999999755569999998762 11 111 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|.. .+++.+.|+++
T Consensus 72 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~ 107 (112)
T 3d6i_A 72 ------------------FEISAVPYFIII-HKGTILKELSGAD-PKEYVSLLEDC 107 (112)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEECSCC-HHHHHHHHHHH
T ss_pred ------------------cCCCcccEEEEE-ECCEEEEEecCCC-HHHHHHHHHHH
Confidence 145555997777 7999999999975 45677776543
No 143
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.50 E-value=2.3e-14 Score=112.86 Aligned_cols=100 Identities=15% Similarity=0.172 Sum_probs=74.8
Q ss_pred ecCCCCeee--cCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhc
Q 028944 52 KDIRGNDVS--LSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMF 129 (201)
Q Consensus 52 ~~~~G~~~~--l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~ 129 (201)
.+.+...+. +...+++++||+||++||++|+.+.|.+.++.++++++ +.++.|++|. .+ +.. ++
T Consensus 10 ~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~-~~~~~vd~~~-------~~----~~~-~~- 75 (287)
T 3qou_A 10 VNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ-FILAKLDCDA-------EQ----MIA-AQ- 75 (287)
T ss_dssp EECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS-SEEEEEETTT-------CH----HHH-HT-
T ss_pred EECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC-eEEEEEeCcc-------CH----HHH-HH-
Confidence 344444442 33345899999999999999999999999999999864 9999998762 21 112 21
Q ss_pred CcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 130 KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 130 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|.++|+++++ ++|+++.++.|..+.+.+.+.++.
T Consensus 76 ---------------------------------~~v~~~Pt~~~~-~~G~~~~~~~g~~~~~~l~~~l~~ 111 (287)
T 3qou_A 76 ---------------------------------FGLRAIPTVYLF-QNGQPVDGFQGPQPEEAIRALLDX 111 (287)
T ss_dssp ---------------------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHH
T ss_pred ---------------------------------cCCCCCCeEEEE-ECCEEEEEeeCCCCHHHHHHHHHH
Confidence 245556998888 799999999999888877776643
No 144
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=6.2e-14 Score=98.66 Aligned_cols=95 Identities=18% Similarity=0.014 Sum_probs=72.0
Q ss_pred CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCC
Q 028944 64 YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNG 143 (201)
Q Consensus 64 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 143 (201)
-+++++||+||++||++|+.+.|.++++.+++++.++.++.|+.+. .++ .. ++|++..+
T Consensus 24 ~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~v~~~~vd~~~-------~~~----~~-~~~~v~~~--------- 82 (137)
T 2dj0_A 24 DKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCTGLNFGKVDVGR-------YTD----VS-TRYKVSTS--------- 82 (137)
T ss_dssp STTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSSSCEEEECCTTT-------CHH----HH-HHTTCCCC---------
T ss_pred CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEeCcc-------CHH----HH-HHccCccc---------
Confidence 3567999999999999999999999999999987679999998762 222 22 33343310
Q ss_pred CCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 144 KNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
.++..+|+++++ ++|+++.++.|..+.+++.+.+++
T Consensus 83 -------------------~~~~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~ 118 (137)
T 2dj0_A 83 -------------------PLTKQLPTLILF-QGGKEAMRRPQIDKKGRAVSWTFS 118 (137)
T ss_dssp -------------------SSSSCSSEEEEE-SSSSEEEEESCBCSSSCBCCCCCC
T ss_pred -------------------CCcCCCCEEEEE-ECCEEEEEecCcCchHHHHHHHhc
Confidence 023355998888 799999999999988877777654
No 145
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.50 E-value=2.8e-14 Score=95.36 Aligned_cols=88 Identities=23% Similarity=0.236 Sum_probs=70.3
Q ss_pred CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCC
Q 028944 64 YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNG 143 (201)
Q Consensus 64 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 143 (201)
.++++++|.||++||++|+...|.+.++.+++++ +.++.|+.|. .+ +.. ++
T Consensus 18 ~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~vd~~~-------~~----~~~-~~--------------- 68 (105)
T 3m9j_A 18 AGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN--VIFLEVDVDD-------CQ----DVA-SE--------------- 68 (105)
T ss_dssp TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT--SEEEEEETTT-------CH----HHH-HH---------------
T ss_pred cCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC--eEEEEEEhhh-------hH----HHH-HH---------------
Confidence 4689999999999999999999999999999865 8999998762 21 111 11
Q ss_pred CCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 144 KNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|. +.+++.+.|+++|
T Consensus 69 -------------------~~v~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~l~~~l 105 (105)
T 3m9j_A 69 -------------------SEVKSMPTFQFF-KKGQKVGEFSGA-NKEKLEATINELV 105 (105)
T ss_dssp -------------------TTCCBSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHC
T ss_pred -------------------cCCCcCcEEEEE-ECCeEEEEEeCC-CHHHHHHHHHHhC
Confidence 145555998988 789999999998 8888998887654
No 146
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.50 E-value=3.7e-14 Score=98.30 Aligned_cols=87 Identities=21% Similarity=0.168 Sum_probs=67.7
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++++||+||++||++|+.+.|.++++.++++ ++.++.|+.|. .. +.. ++
T Consensus 37 ~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~vd~d~-------~~----~l~-~~---------------- 86 (124)
T 1xfl_A 37 SKTLVVVDFTASWCGPCRFIAPFFADLAKKLP--NVLFLKVDTDE-------LK----SVA-SD---------------- 86 (124)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------SH----HHH-HH----------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CcEEEEEECcc-------CH----HHH-HH----------------
Confidence 68999999999999999999999999999986 59999998761 11 111 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|. +.+++.+.|+++|
T Consensus 87 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 123 (124)
T 1xfl_A 87 ------------------WAIQAMPTFMFL-KEGKILDKVVGA-KKDELQSTIAKHL 123 (124)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHHC
T ss_pred ------------------cCCCccCEEEEE-ECCEEEEEEeCC-CHHHHHHHHHHhc
Confidence 144555986665 899999999884 7788888877643
No 147
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.49 E-value=9.1e-14 Score=93.23 Aligned_cols=89 Identities=17% Similarity=0.135 Sum_probs=71.8
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.+++++|.||++||++|+...+.+.++.++++++ +.++.|+.|. +.+ .. ++
T Consensus 17 ~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~~~v~~~~-------~~~----~~-~~---------------- 67 (109)
T 2yzu_A 17 QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK-LLVAKLDVDE-------NPK----TA-MR---------------- 67 (109)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CHH----HH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-eEEEEEECCC-------CHh----HH-Hh----------------
Confidence 4789999999999999999999999999999864 9999998762 211 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 68 ------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 68 ------------------YRVMSIPTVILF-KDGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred ------------------CCCCcCCEEEEE-eCCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 144555999998 89999999999998888988887764
No 148
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.49 E-value=2e-14 Score=101.22 Aligned_cols=102 Identities=15% Similarity=0.102 Sum_probs=74.8
Q ss_pred EecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCC--eEEEEeecCCCCCCCCCCHHHHHHHHHhh
Q 028944 51 VKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQD--FEVLAFPCNQFAGQEPGSNEEIQEVACTM 128 (201)
Q Consensus 51 l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 128 (201)
+.+.++..+...-.+++++||+||++||++|+.+.|.+.++.+++++++ +.++.|+.+. . .+.. ++
T Consensus 19 v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~~~v~~~~vd~~~-------~----~~~~-~~ 86 (140)
T 2dj1_A 19 VWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATS-------A----SMLA-SK 86 (140)
T ss_dssp EEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSSSSCCEEEEECTTT-------C----HHHH-HH
T ss_pred CEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCceEEEEEeCcc-------c----HHHH-HH
Confidence 4455666654333357999999999999999999999999999998763 7888876551 1 1111 11
Q ss_pred cCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 129 FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 129 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|..+|+++++ ++|+ +.++.|..+.+++.+.|+++
T Consensus 87 ----------------------------------~~v~~~Pt~~~~-~~G~-~~~~~g~~~~~~l~~~l~~~ 122 (140)
T 2dj1_A 87 ----------------------------------FDVSGYPTIKIL-KKGQ-AVDYDGSRTQEEIVAKVREV 122 (140)
T ss_dssp ----------------------------------TTCCSSSEEEEE-ETTE-EEECCSCCCHHHHHHHHHHH
T ss_pred ----------------------------------CCCCccCeEEEE-ECCc-EEEcCCCCCHHHHHHHHHHh
Confidence 145555999999 7899 66889988888888877643
No 149
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.49 E-value=1.4e-14 Score=102.48 Aligned_cols=88 Identities=10% Similarity=-0.013 Sum_probs=69.8
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||.||++||++|+...|.+.++.++++++ +.++.|+.|. .++ .. ++
T Consensus 23 ~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~~----l~-~~---------------- 73 (140)
T 3hz4_A 23 SKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS-AVFGRINIAT-------NPW----TA-EK---------------- 73 (140)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-SEEEEEETTT-------CHH----HH-HH----------------
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc-eEEEEEECCc-------CHh----HH-HH----------------
Confidence 4789999999999999999999999999999875 9999998762 211 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 74 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 110 (140)
T 3hz4_A 74 ------------------YGVQGTPTFKFF-CHGRPVWEQVGQIYPSILKNAVRDM 110 (140)
T ss_dssp ------------------HTCCEESEEEEE-ETTEEEEEEESSCCHHHHHHHHHHH
T ss_pred ------------------CCCCcCCEEEEE-eCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 145555987777 8999999999999888888877653
No 150
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.48 E-value=4.4e-14 Score=95.56 Aligned_cols=86 Identities=19% Similarity=0.133 Sum_probs=66.9
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCCC
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKN 145 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 145 (201)
++++||.||++||++|+...|.+.++.+++++ ++.++.|+.|. .. +.. ++
T Consensus 24 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~----~~~-~~----------------- 73 (112)
T 1ep7_A 24 HKPIVVDFTATWCGPCKMIAPLFETLSNDYAG-KVIFLKVDVDA-------VA----AVA-EA----------------- 73 (112)
T ss_dssp TCCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-------TH----HHH-HH-----------------
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHcCC-CeEEEEEECCc-------hH----HHH-HH-----------------
Confidence 78999999999999999999999999999976 59999998761 11 111 11
Q ss_pred chhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 146 AAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|. +.+++.+.|+++
T Consensus 74 -----------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 74 -----------------AGITAMPTFHVY-KDGVKADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp -----------------HTCCBSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHHH
T ss_pred -----------------cCCCcccEEEEE-ECCeEEEEEcCC-CHHHHHHHHHHH
Confidence 144455985555 899999999998 788888877654
No 151
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.47 E-value=3.1e-14 Score=98.17 Aligned_cols=89 Identities=15% Similarity=0.165 Sum_probs=69.8
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++++||.||++||++|+...|.++++.++++++++.++.|+.|. ..+ .. +.
T Consensus 32 ~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~~v~~~~vd~d~-------~~~----~~-~~---------------- 83 (121)
T 2j23_A 32 GDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGDKVGFYKVDVDE-------QSQ----IA-QE---------------- 83 (121)
T ss_dssp SSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHHHSEEEEEETTT-------CHH----HH-HH----------------
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCCcEEEEEEECcC-------CHH----HH-HH----------------
Confidence 578999999999999999999999999998876679999998762 111 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|. +.+++.+.|+++|
T Consensus 84 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 84 ------------------VGIRAMPTFVFF-KNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp ------------------HTCCSSSEEEEE-ETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred ------------------cCCCcccEEEEE-ECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 144445997777 699999999998 7888888887653
No 152
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.47 E-value=3.7e-14 Score=102.17 Aligned_cols=88 Identities=16% Similarity=0.061 Sum_probs=70.7
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||+||++||++|+.+.|.++++.+++.++ +.++.|+.|. .+ +.. ++
T Consensus 63 ~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 113 (155)
T 2ppt_A 63 DDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ-VRLAKIDTQA-------HP----AVA-GR---------------- 113 (155)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-CEEEEEETTT-------ST----HHH-HH----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-EEEEEEeCCc-------cH----HHH-HH----------------
Confidence 5789999999999999999999999999999865 9999998762 11 111 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 114 ------------------~~i~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 150 (155)
T 2ppt_A 114 ------------------HRIQGIPAFILF-HKGRELARAAGARPASELVGFVRGK 150 (155)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred ------------------cCCCcCCEEEEE-eCCeEEEEecCCCCHHHHHHHHHHH
Confidence 255556998888 7999999999998888888877653
No 153
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.47 E-value=4.5e-14 Score=95.30 Aligned_cols=88 Identities=17% Similarity=0.149 Sum_probs=70.2
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
++++++|.||++||++|+...|.+.++.+++++ ++.++.|+.|. .+ +.. ++
T Consensus 21 ~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~-~v~~~~vd~~~-------~~----~l~-~~---------------- 71 (111)
T 3gnj_A 21 EGKACLVMFSRKNCHVCQKVTPVLEELRLNYEE-SFGFYYVDVEE-------EK----TLF-QR---------------- 71 (111)
T ss_dssp SCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTT-TSEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCC-ceEEEEEECCc-------Ch----hHH-Hh----------------
Confidence 468999999999999999999999999999976 49999998762 21 112 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 72 ------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 72 ------------------FSLKGVPQILYF-KDGEYKGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp ------------------TTCCSSCEEEEE-ETTEEEEEEESSCCHHHHHHHHHHH
T ss_pred ------------------cCCCcCCEEEEE-ECCEEEEEEeccCCHHHHHHHHHHH
Confidence 144555998888 7999999999999888888877653
No 154
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.47 E-value=6.7e-14 Score=96.57 Aligned_cols=89 Identities=22% Similarity=0.220 Sum_probs=67.5
Q ss_pred CCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccC
Q 028944 63 GYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVN 142 (201)
Q Consensus 63 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 142 (201)
+.++++++|.||++|||+|+...|.++++.++++ ++.++.|+.++ +.. +.. ++
T Consensus 34 ~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~~~~~~vd~~~------~~~----~~~-~~-------------- 86 (124)
T 1faa_A 34 AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL--DVIFLKLDCNQ------ENK----TLA-KE-------------- 86 (124)
T ss_dssp HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEECSS------TTH----HHH-HH--------------
T ss_pred hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC--CCEEEEEecCc------chH----HHH-HH--------------
Confidence 3478999999999999999999999999999986 48899988651 111 111 11
Q ss_pred CCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 143 GKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+ ++++++|+++.++.|.. .+++.+.|+++
T Consensus 87 --------------------~~v~~~Pt-~~~~~~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 87 --------------------LGIRVVPT-FKILKENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp --------------------HCCSSSSE-EEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred --------------------cCCCeeeE-EEEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 14555598 66668999999998876 77888877654
No 155
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.47 E-value=8.3e-14 Score=94.34 Aligned_cols=87 Identities=11% Similarity=0.094 Sum_probs=68.8
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++++||.||++||++|+...|.+.++.++++ ++.++.|+.+. ..+ .. ++
T Consensus 18 ~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~--~v~~~~vd~~~-------~~~----l~-~~---------------- 67 (110)
T 2l6c_A 18 GLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP--QVAISSVDSEA-------RPE----LM-KE---------------- 67 (110)
T ss_dssp TCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT--TSCEEEEEGGG-------CHH----HH-HH----------------
T ss_pred cCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC--CcEEEEEcCcC-------CHH----HH-HH----------------
Confidence 46899999999999999999999999998875 48888887651 111 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.+++.
T Consensus 68 ------------------~~v~~~Pt~~~~-~~G~~v~~~~G~~~~~~l~~~~~~~ 104 (110)
T 2l6c_A 68 ------------------LGFERVPTLVFI-RDGKVAKVFSGIMNPRELQALYASI 104 (110)
T ss_dssp ------------------TTCCSSCEEEEE-ESSSEEEEEESCCCHHHHHHHHHTC
T ss_pred ------------------cCCcccCEEEEE-ECCEEEEEEcCCCCHHHHHHHHHHH
Confidence 145555999999 8999999999999899998888764
No 156
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=5.8e-14 Score=97.87 Aligned_cols=88 Identities=17% Similarity=0.089 Sum_probs=68.9
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC---CCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeecc
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKN---QDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDV 141 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 141 (201)
.++++||.||++||++|+.+.|.+.++.+++++ .++.++.|+.+. .. +.. ++
T Consensus 24 ~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~l~-~~------------- 78 (133)
T 1x5d_A 24 SEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQTKGKVKLAAVDATV-------NQ----VLA-SR------------- 78 (133)
T ss_dssp SSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHHTTTSEEEEEEETTT-------CC----HHH-HH-------------
T ss_pred CCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhhcCCcEEEEEEECCC-------CH----HHH-Hh-------------
Confidence 468999999999999999999999999999972 349999998762 11 111 11
Q ss_pred CCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 142 NGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|..+|+++++++ |+++.++.|..+.+++.+.|++
T Consensus 79 ---------------------~~v~~~Pt~~~~~~-g~~~~~~~G~~~~~~l~~~l~~ 114 (133)
T 1x5d_A 79 ---------------------YGIRGFPTIKIFQK-GESPVDYDGGRTRSDIVSRALD 114 (133)
T ss_dssp ---------------------HTCCSSSEEEEEET-TEEEEEECSCCSHHHHHHHHHH
T ss_pred ---------------------CCCCeeCeEEEEeC-CCceEEecCCCCHHHHHHHHHH
Confidence 14555699999987 9999999999888888877754
No 157
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.46 E-value=1.2e-13 Score=94.34 Aligned_cols=86 Identities=19% Similarity=0.245 Sum_probs=67.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+|+++||+||++||++|+...|.++++.+++++ +.++.|+.|. .. +.. ++
T Consensus 29 ~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~--v~~~~vd~~~-------~~----~l~-~~---------------- 78 (114)
T 2oe3_A 29 QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD--VRFVKCDVDE-------SP----DIA-KE---------------- 78 (114)
T ss_dssp HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--CEEEEEECCC-------CH----HHH-HH----------------
Confidence 578999999999999999999999999999875 9999998762 21 112 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|.. .+++.+.|+++
T Consensus 79 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~ 114 (114)
T 2oe3_A 79 ------------------CEVTAMPTFVLG-KDGQLIGKIIGAN-PTALEKGIKDL 114 (114)
T ss_dssp ------------------TTCCSBSEEEEE-ETTEEEEEEESSC-HHHHHHHHHTC
T ss_pred ------------------CCCCcccEEEEE-eCCeEEEEEeCCC-HHHHHHHHHhC
Confidence 144455986665 8999999999988 88888887653
No 158
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.46 E-value=1.6e-13 Score=91.73 Aligned_cols=89 Identities=20% Similarity=0.251 Sum_probs=68.8
Q ss_pred CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCC
Q 028944 64 YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNG 143 (201)
Q Consensus 64 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 143 (201)
.++++++|.||++||++|+...|.++++.+++++ ++.++.|+.|. .. +.. ++
T Consensus 18 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~v~~~~-------~~----~~~-~~--------------- 69 (106)
T 1xwb_A 18 ASGKLVVLDFFATWCGPCKMISPKLVELSTQFAD-NVVVLKVDVDE-------CE----DIA-ME--------------- 69 (106)
T ss_dssp HTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TEEEEEEETTT-------CH----HHH-HH---------------
T ss_pred cCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCC-CeEEEEEeccc-------hH----HHH-HH---------------
Confidence 3689999999999999999999999999999964 59999998762 11 111 11
Q ss_pred CCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 144 KNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.| .+.+++.+.|+++|
T Consensus 70 -------------------~~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 70 -------------------YNISSMPTFVFL-KNGVKVEEFAG-ANAKRLEDVIKANI 106 (106)
T ss_dssp -------------------TTCCSSSEEEEE-ETTEEEEEEES-CCHHHHHHHHHHTC
T ss_pred -------------------cCCCcccEEEEE-cCCcEEEEEcC-CCHHHHHHHHHHhC
Confidence 144445985555 79999999999 67888888887764
No 159
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.46 E-value=6.8e-14 Score=92.98 Aligned_cols=87 Identities=15% Similarity=0.109 Sum_probs=69.3
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
++++++|.||++|||+|+...+.+.++.+++++ +.++.|+.|. .. +.. ++
T Consensus 15 ~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--~~~~~v~~~~-------~~----~~~-~~---------------- 64 (104)
T 2e0q_A 15 SHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--VGFGKLNSDE-------NP----DIA-AR---------------- 64 (104)
T ss_dssp HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC--ceEEEEECCC-------CH----HHH-Hh----------------
Confidence 578999999999999999999999999999875 9999998762 11 111 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.++++
T Consensus 65 ------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~ 101 (104)
T 2e0q_A 65 ------------------YGVMSLPTVIFF-KDGEPVDEIIGAVPREEIEIRIKNL 101 (104)
T ss_dssp ------------------TTCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred ------------------CCccccCEEEEE-ECCeEhhhccCCCCHHHHHHHHHHH
Confidence 144455998888 8999999999998888888877653
No 160
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.45 E-value=2.5e-13 Score=93.08 Aligned_cols=89 Identities=19% Similarity=0.128 Sum_probs=71.0
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||.||++||++|+...|.+.++.+++++ ++.++.|+.+. ..+ .. ++
T Consensus 29 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~~----~~-~~---------------- 79 (121)
T 2i1u_A 29 SNKPVLVDFWATWCGPCKMVAPVLEEIATERAT-DLTVAKLDVDT-------NPE----TA-RN---------------- 79 (121)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT-TCEEEEEETTT-------CHH----HH-HH----------------
T ss_pred CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEECCC-------CHH----HH-Hh----------------
Confidence 478999999999999999999999999999976 49999998762 211 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++++
T Consensus 80 ------------------~~i~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 80 ------------------FQVVSIPTLILF-KDGQPVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHTCSCC
T ss_pred ------------------cCCCcCCEEEEE-ECCEEEEEecCCCCHHHHHHHHHHHH
Confidence 144555997777 59999999999998888999888764
No 161
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.45 E-value=5.8e-14 Score=98.89 Aligned_cols=91 Identities=20% Similarity=0.251 Sum_probs=69.5
Q ss_pred eecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeee
Q 028944 59 VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDK 138 (201)
Q Consensus 59 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (201)
++..+.+|+++||+||++||++|+.+.|.++++.++++ ++.++.|+.|. .. +.. ++
T Consensus 39 ~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~--~v~~~~v~~~~-------~~----~~~-~~---------- 94 (139)
T 3d22_A 39 LSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP--SLMFLVIDVDE-------LS----DFS-AS---------- 94 (139)
T ss_dssp HHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH-HH----------
T ss_pred HHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC--CCEEEEEeCcc-------cH----HHH-HH----------
Confidence 33334568999999999999999999999999999984 59999998762 11 112 11
Q ss_pred eccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 139 IDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 139 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+++..+|+++++ ++|+++.++.|. +.+++.+.|++
T Consensus 95 ------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~ 129 (139)
T 3d22_A 95 ------------------------WEIKATPTFFFL-RDGQQVDKLVGA-NKPELHKKITA 129 (139)
T ss_dssp ------------------------TTCCEESEEEEE-ETTEEEEEEESC-CHHHHHHHHHH
T ss_pred ------------------------cCCCcccEEEEE-cCCeEEEEEeCC-CHHHHHHHHHH
Confidence 145555997777 899999999998 67777777654
No 162
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.45 E-value=1.1e-14 Score=109.85 Aligned_cols=103 Identities=10% Similarity=0.143 Sum_probs=76.8
Q ss_pred eEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhh
Q 028944 49 FTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTM 128 (201)
Q Consensus 49 f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 128 (201)
..+.+.++..+.....+++++||.||++||++|+.+.|.+.++.++++++ +.++.|+.+. .. +.. +.
T Consensus 97 ~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~ 163 (210)
T 3apq_A 97 PEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL-LRIGAVNCGD-------DR----MLC-RM 163 (210)
T ss_dssp TTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-BEEEEEETTT-------CH----HHH-HH
T ss_pred CceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc-eEEEEEECCc-------cH----HHH-HH
Confidence 33444444444333346799999999999999999999999999999764 9999998762 21 112 11
Q ss_pred cCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 129 FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 129 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|..+|+++++ ++|+++.++.|..+.+++.+.|++
T Consensus 164 ----------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~ 199 (210)
T 3apq_A 164 ----------------------------------KGVNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQ 199 (210)
T ss_dssp ----------------------------------TTCCSSSEEEEE-CTTSCCEECCSCCCHHHHHHHHHH
T ss_pred ----------------------------------cCCCcCCeEEEE-ECCCceeEecCCCCHHHHHHHHHH
Confidence 145555998888 999999999999888888877754
No 163
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.45 E-value=2.1e-13 Score=92.46 Aligned_cols=87 Identities=14% Similarity=0.102 Sum_probs=68.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+|+++||+||++||++|+...|.+.++.++++ ++.++.|+.+. .. +.. ++
T Consensus 25 ~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~--~v~~~~vd~~~-------~~----~~~-~~---------------- 74 (112)
T 1syr_A 25 QNELVIVDFFAEWCGPCKRIAPFYEECSKTYT--KMVFIKVDVDE-------VS----EVT-EK---------------- 74 (112)
T ss_dssp HCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------TH----HHH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC--CCEEEEEECCC-------CH----HHH-HH----------------
Confidence 57999999999999999999999999999986 49999998762 11 122 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|. +.+++.+.|+++|
T Consensus 75 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 75 ------------------ENITSMPTFKVY-KNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred ------------------cCCCcccEEEEE-ECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 144455985555 799999999998 8889999888764
No 164
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.45 E-value=5.8e-14 Score=95.96 Aligned_cols=90 Identities=23% Similarity=0.179 Sum_probs=68.4
Q ss_pred cCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeec
Q 028944 61 LSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKID 140 (201)
Q Consensus 61 l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 140 (201)
+.+.++++++|.||++||++|+...|.++++.+++ ++.++.|+.|. .. +.. ++
T Consensus 28 l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~---~~~~~~vd~~~-------~~----~~~-~~------------ 80 (117)
T 2xc2_A 28 LEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY---DAIFVKVDVDK-------LE----ETA-RK------------ 80 (117)
T ss_dssp HHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS---SSEEEEEETTT-------SH----HHH-HH------------
T ss_pred HHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc---CcEEEEEECCc-------cH----HHH-HH------------
Confidence 34457899999999999999999999999998887 58999998761 11 112 11
Q ss_pred cCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 141 VNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.| .+.+++.+.|+++|
T Consensus 81 ----------------------~~v~~~Pt~~~~-~~G~~~~~~~G-~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 81 ----------------------YNISAMPTFIAI-KNGEKVGDVVG-ASIAKVEDMIKKFI 117 (117)
T ss_dssp ----------------------TTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred ----------------------cCCCccceEEEE-eCCcEEEEEeC-CCHHHHHHHHHHhC
Confidence 144555986555 79999999999 57788888887654
No 165
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.44 E-value=9.6e-14 Score=92.49 Aligned_cols=89 Identities=20% Similarity=0.275 Sum_probs=68.5
Q ss_pred CCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccC
Q 028944 63 GYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVN 142 (201)
Q Consensus 63 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 142 (201)
+.++++++|.||++|||+|+...+.+.++.++++ ++.++.|+.+. .. +.. ++
T Consensus 16 ~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~----~~~-~~-------------- 67 (104)
T 2vim_A 16 ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP--EVEFAKVDVDQ-------NE----EAA-AK-------------- 67 (104)
T ss_dssp TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------CH----HHH-HH--------------
T ss_pred hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC--CCEEEEEeccC-------CH----HHH-HH--------------
Confidence 3468999999999999999999999999999986 59999998762 11 111 11
Q ss_pred CCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 143 GKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.| .+.+++.+.|+++|
T Consensus 68 --------------------~~v~~~Pt~~~~-~~g~~~~~~~G-~~~~~l~~~l~~~l 104 (104)
T 2vim_A 68 --------------------YSVTAMPTFVFI-KDGKEVDRFSG-ANETKLRETITRHK 104 (104)
T ss_dssp --------------------TTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHHC
T ss_pred --------------------cCCccccEEEEE-eCCcEEEEEeC-CCHHHHHHHHHhhC
Confidence 144455986666 59999999999 57888888887654
No 166
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.44 E-value=1.2e-13 Score=98.42 Aligned_cols=87 Identities=7% Similarity=-0.071 Sum_probs=66.1
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||.|||+||++|+...|.|.++.++++++ +.|+-|++|+. ++ +. ++
T Consensus 40 ~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~-v~f~kVDVDe~-------~e----~a-~~---------------- 90 (160)
T 2av4_A 40 DERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF-CVIYLVDITEV-------PD----FN-TM---------------- 90 (160)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETTTC-------CT----TT-TT----------------
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-cEEEEEECCCC-------HH----HH-HH----------------
Confidence 4689999999999999999999999999999765 88999988721 00 00 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEE--E-------ecCCCCC-chhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVV--E-------RYAPTTS-PLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~--~-------~~~g~~~-~~~l~~~l~~ 199 (201)
++|..+|+++++ ++|+.+ . +..|..+ .+++.+.|++
T Consensus 91 ------------------y~V~siPT~~fF-k~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~ 136 (160)
T 2av4_A 91 ------------------YELYDPVSVMFF-YRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVET 136 (160)
T ss_dssp ------------------TTCCSSEEEEEE-ETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHH
T ss_pred ------------------cCCCCCCEEEEE-ECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHH
Confidence 266666997666 688887 5 7788776 7777777654
No 167
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.44 E-value=1.8e-13 Score=94.74 Aligned_cols=89 Identities=21% Similarity=0.189 Sum_probs=67.5
Q ss_pred CCcEEEEEEeecCCC--------------CcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 65 RGKVLLVVNVASKCG--------------LTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~--------------~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
+||++||.||++||+ +|+...|.++++.++++++ +.++.|+.|. +.
T Consensus 20 ~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~~~-~~~~~vd~d~-------~~------------ 79 (123)
T 1oaz_A 20 ADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NP------------ 79 (123)
T ss_dssp CSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC--------CEEEEEETTS-------CT------------
T ss_pred CCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhcCC-eEEEEEECCC-------CH------------
Confidence 579999999999999 9999999999999998764 8999998762 10
Q ss_pred cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 131 AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 131 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
... .. ++|.++|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 80 -------------~l~-~~-------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 80 -------------GTA-PK-------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp -------------TTG-GG-------------GTCCBSSEEEEE-ESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred -------------HHH-HH-------------cCCCccCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 001 11 266677999999 99999999999999999999998875
No 168
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.44 E-value=8.8e-14 Score=96.55 Aligned_cols=103 Identities=9% Similarity=-0.066 Sum_probs=74.0
Q ss_pred EecCCCCeeecCCC-CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC----CCeEEEEeecCCCCCCCCCCHHHHHHHH
Q 028944 51 VKDIRGNDVSLSGY-RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKN----QDFEVLAFPCNQFAGQEPGSNEEIQEVA 125 (201)
Q Consensus 51 l~~~~G~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~----~~~~vv~vs~d~~~~~~~~~~~~~~~~~ 125 (201)
+...++..+...-. .++++||.||++||++|+.+.|.+.++.+++.. .++.++.|+.+. .. +..
T Consensus 17 v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~~~~~~v~~~~vd~~~-------~~----~l~ 85 (127)
T 3h79_A 17 VVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQKRNHLTFVAARIDGEK-------YP----DVI 85 (127)
T ss_dssp CEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSTTTTTEEEEEEETTT-------CH----HHH
T ss_pred eEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhcccCCCeEEEEEEccc-------cH----hHH
Confidence 44555655542222 478999999999999999999999999988752 258888887661 11 111
Q ss_pred HhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEE-EecCCCCCchhhhhcccC
Q 028944 126 CTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVV-ERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 126 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~g~~~~~~l~~~l~~ 199 (201)
++ ++|...|+++++++.+++. ..|.|..+.+.+.+.|++
T Consensus 86 -~~----------------------------------~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~ 125 (127)
T 3h79_A 86 -ER----------------------------------MRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQ 125 (127)
T ss_dssp -HH----------------------------------TTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHH
T ss_pred -Hh----------------------------------cCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHh
Confidence 11 1455559999998777653 578899999988888764
No 169
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.44 E-value=9.8e-16 Score=111.49 Aligned_cols=109 Identities=12% Similarity=0.081 Sum_probs=72.7
Q ss_pred ccceEEecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHH
Q 028944 46 IYDFTVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVA 125 (201)
Q Consensus 46 ~p~f~l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~ 125 (201)
.+++.+.+.+ +.++....+||++||+||++||++|+.+.|.+.++.+.+.. ++.++.|++|. +.+. .
T Consensus 27 ~~~i~w~~~~-~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~-~~~~~~v~~d~-------~~~~----~ 93 (164)
T 1sen_A 27 GDHIHWRTLE-DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISEL-SHNFVMVNLED-------EEEP----K 93 (164)
T ss_dssp CTTSCBCCHH-HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH-HTTSEEEEEEG-------GGSC----S
T ss_pred cccccccCHH-HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc-CCeEEEEEecC-------CchH----H
Confidence 4455555544 45666666799999999999999999999999997665543 35666666551 0000 0
Q ss_pred HhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCC----------CCchhhhh
Q 028944 126 CTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPT----------TSPLKIEV 195 (201)
Q Consensus 126 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~----------~~~~~l~~ 195 (201)
... |. ..+..+|+++++|++|+++.++.|. .+.+++.+
T Consensus 94 ~~~---------------------~~-----------~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~ 141 (164)
T 1sen_A 94 DED---------------------FS-----------PDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQ 141 (164)
T ss_dssp CGG---------------------GC-----------TTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHH
T ss_pred HHH---------------------hc-----------ccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHH
Confidence 000 00 0223459999999999999888885 55666666
Q ss_pred cccC
Q 028944 196 GTTI 199 (201)
Q Consensus 196 ~l~~ 199 (201)
.|++
T Consensus 142 ~l~~ 145 (164)
T 1sen_A 142 GMKE 145 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 170
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.44 E-value=8.5e-14 Score=97.82 Aligned_cols=92 Identities=10% Similarity=0.084 Sum_probs=65.7
Q ss_pred EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCCCch
Q 028944 68 VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKNAA 147 (201)
Q Consensus 68 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 147 (201)
++||+||++||++|+.+.|.+.++.++++ +.++.|++++ ..+.....+.. + . .
T Consensus 33 ~vlv~F~a~wC~~C~~~~p~l~~l~~~~~---v~~~~vd~~~-----~~~~~~~d~~~-~-----------------l-~ 85 (135)
T 3emx_A 33 DAILAVYSKTCPHCHRDWPQLIQASKEVD---VPIVMFIWGS-----LIGERELSAAR-L-----------------E-M 85 (135)
T ss_dssp SEEEEEEETTCHHHHHHHHHHHHHHTTCC---SCEEEEEECT-----TCCHHHHHHHH-H-----------------H-H
T ss_pred cEEEEEECCcCHhhhHhChhHHHHHHHCC---CEEEEEECCC-----chhhhhhhhhH-H-----------------H-H
Confidence 99999999999999999999999998885 8888888763 11111111100 0 0 0
Q ss_pred hhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 148 PIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 148 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
.. ++|..+|++++++ +|+++.++.|..+.+.+.+.++++
T Consensus 86 ~~-------------~~v~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~i~~~ 124 (135)
T 3emx_A 86 NK-------------AGVEGTPTLVFYK-EGRIVDKLVGATPWSLKVEKAREI 124 (135)
T ss_dssp HH-------------HTCCSSSEEEEEE-TTEEEEEEESCCCHHHHHHHHHHH
T ss_pred HH-------------cCCceeCeEEEEc-CCEEEEEEeCCCCHHHHHHHHHHH
Confidence 11 2666779665555 999999999999888777776654
No 171
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.43 E-value=9.8e-14 Score=95.41 Aligned_cols=86 Identities=19% Similarity=0.190 Sum_probs=67.0
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++++||.||++||++|+...|.+.++.+++++ +.++.|+.|. .. +.. ++
T Consensus 33 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~~vd~~~-------~~----~~~-~~---------------- 82 (122)
T 2vlu_A 33 AKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--AVFLKVDVDE-------LK----PIA-EQ---------------- 82 (122)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--SEEEEEETTT-------CH----HHH-HH----------------
T ss_pred cCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--cEEEEEECCC-------CH----HHH-HH----------------
Confidence 578999999999999999999999999999875 8999998762 11 111 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|.. .+++.+.|+++
T Consensus 83 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~ 118 (122)
T 2vlu_A 83 ------------------FSVEAMPTFLFM-KEGDVKDRVVGAI-KEELTAKVGLH 118 (122)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred ------------------cCCCcccEEEEE-eCCEEEEEEeCcC-HHHHHHHHHHH
Confidence 144555986555 8999999999988 88888877653
No 172
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.43 E-value=2.2e-13 Score=91.76 Aligned_cols=87 Identities=13% Similarity=0.103 Sum_probs=68.4
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCC--CeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCC
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQ--DFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNG 143 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 143 (201)
++++||.||++||++|+...|.+.++.+++.+. ++.++.|+.+. ..+ .. ++
T Consensus 21 ~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~-------~~~----l~-~~--------------- 73 (111)
T 3uvt_A 21 EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPGLAGVKIAEVDCTA-------ERN----IC-SK--------------- 73 (111)
T ss_dssp SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-CCEEEEEEETTT-------CHH----HH-HH---------------
T ss_pred CCcEEEEEECCCChhHHHhhHHHHHHHHHhhccCCceEEEEEeccc-------cHh----HH-Hh---------------
Confidence 789999999999999999999999999988644 68899988762 211 12 21
Q ss_pred CCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 144 KNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|++
T Consensus 74 -------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~ 109 (111)
T 3uvt_A 74 -------------------YSVRGYPTLLLF-RGGKKVSEHSGGRDLDSLHRFVLS 109 (111)
T ss_dssp -------------------TTCCSSSEEEEE-ETTEEEEEECSCCSHHHHHHHHHH
T ss_pred -------------------cCCCcccEEEEE-eCCcEEEeccCCcCHHHHHHHHHh
Confidence 144555987777 799999999999999988887754
No 173
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.43 E-value=1.5e-13 Score=98.62 Aligned_cols=86 Identities=10% Similarity=0.037 Sum_probs=67.1
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++++||+||++||++|+.+.|.+.++.++++ ++.++.|+.|. .+ +.. ++
T Consensus 31 ~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~~~-------~~----~l~-~~---------------- 80 (153)
T 2wz9_A 31 AKSLLVVHFWAPWAPQCAQMNEVMAELAKELP--QVSFVKLEAEG-------VP----EVS-EK---------------- 80 (153)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC--CeEEEEEECCC-------CH----HHH-HH----------------
Confidence 58999999999999999999999999999984 59999998762 11 111 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|..+|++++++ +|+++.++.|. +.+++.+.|+++
T Consensus 81 ------------------~~v~~~Pt~~~~~-~G~~~~~~~G~-~~~~l~~~i~~~ 116 (153)
T 2wz9_A 81 ------------------YEISSVPTFLFFK-NSQKIDRLDGA-HAPELTKKVQRH 116 (153)
T ss_dssp ------------------TTCCSSSEEEEEE-TTEEEEEEESS-CHHHHHHHHHHH
T ss_pred ------------------cCCCCCCEEEEEE-CCEEEEEEeCC-CHHHHHHHHHHH
Confidence 1455559999999 99999998885 566777776543
No 174
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.43 E-value=1.9e-13 Score=92.44 Aligned_cols=87 Identities=17% Similarity=0.120 Sum_probs=67.0
Q ss_pred CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCC
Q 028944 64 YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNG 143 (201)
Q Consensus 64 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 143 (201)
.+|+++||.||++||++|+...+.++++.++++ ++.++.|+.|. ..+ .. ++
T Consensus 24 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~~----~~-~~--------------- 74 (113)
T 1ti3_A 24 GSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP--NVTFLKVDVDE-------LKA----VA-EE--------------- 74 (113)
T ss_dssp TSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS--SEEEEEEETTT-------CHH----HH-HH---------------
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC--CcEEEEEEccc-------cHH----HH-Hh---------------
Confidence 358999999999999999999999999999986 59999998762 221 11 11
Q ss_pred CCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 144 KNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.| .+.+++.+.|+++
T Consensus 75 -------------------~~v~~~Pt~~~~-~~G~~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 75 -------------------WNVEAMPTFIFL-KDGKLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp -------------------HHCSSTTEEEEE-ETTEEEEEEEC-CCTTHHHHHHHHH
T ss_pred -------------------CCCCcccEEEEE-eCCEEEEEEec-CCHHHHHHHHHHh
Confidence 134445987777 79999999888 5677888777653
No 175
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.43 E-value=9.3e-14 Score=93.39 Aligned_cols=86 Identities=14% Similarity=0.161 Sum_probs=65.7
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
++++++|.||++||++|+...|.+.++.++++ ++.++.|+.|. .++ .. ++
T Consensus 20 ~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~~--~~~~~~vd~~~-------~~~----~~-~~---------------- 69 (107)
T 1gh2_A 20 GSRLAVVKFTMRGCGPCLRIAPAFSSMSNKYP--QAVFLEVDVHQ-------CQG----TA-AT---------------- 69 (107)
T ss_dssp TTSCEEEEEECSSCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SHH----HH-HH----------------
T ss_pred CCCEEEEEEECCCChhhHHHHHHHHHHHHHCC--CcEEEEEECcc-------CHH----HH-Hh----------------
Confidence 57899999999999999999999999999994 59999998762 111 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|.. .+++.+.|+++
T Consensus 70 ------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~-~~~l~~~l~~~ 105 (107)
T 1gh2_A 70 ------------------NNISATPTFQFF-RNKVRIDQYQGAD-AVGLEEKIKQH 105 (107)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred ------------------cCCCcccEEEEE-ECCeEEEEEeCCC-HHHHHHHHHHh
Confidence 145555987777 7999999999955 45577777643
No 176
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.43 E-value=1.1e-13 Score=96.17 Aligned_cols=86 Identities=9% Similarity=0.096 Sum_probs=66.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++++||.||++||++|+...|.+.++.++++ ++.++.|+.|. ..+ .. +.
T Consensus 36 ~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~--~v~~~~vd~d~-------~~~----l~-~~---------------- 85 (125)
T 1r26_A 36 EDILTVAWFTAVWCGPCKTIERPMEKIAYEFP--TVKFAKVDADN-------NSE----IV-SK---------------- 85 (125)
T ss_dssp SSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT--TSEEEEEETTT-------CHH----HH-HH----------------
T ss_pred cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC--CCEEEEEECCC-------CHH----HH-HH----------------
Confidence 67899999999999999999999999999984 59999998762 111 11 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.| .+.+++.+.|+++
T Consensus 86 ------------------~~v~~~Pt~~i~-~~G~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 86 ------------------CRVLQLPTFIIA-RSGKMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp ------------------TTCCSSSEEEEE-ETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred ------------------cCCCcccEEEEE-eCCeEEEEEeC-CCHHHHHHHHHHH
Confidence 145555986655 89999999999 5778888777653
No 177
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.42 E-value=2.4e-13 Score=95.89 Aligned_cols=102 Identities=15% Similarity=0.096 Sum_probs=68.3
Q ss_pred EecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 51 VKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 51 l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
+.+.++..+...-.+++.+||.||++||++|+...|.+.++.++++++ +.++.|+.+. .. +.. ++
T Consensus 35 v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~-v~~~~vd~~~-------~~----~l~-~~-- 99 (140)
T 1v98_A 35 VVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR-LKVVKVNVDE-------HP----GLA-AR-- 99 (140)
T ss_dssp --------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-EEEEEEETTT-------CH----HHH-HH--
T ss_pred cccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc-eEEEEEECCC-------CH----HHH-HH--
Confidence 334455555433233334999999999999999999999999999864 9999998762 11 111 11
Q ss_pred cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 131 AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 131 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 100 --------------------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~i~~~ 136 (140)
T 1v98_A 100 --------------------------------YGVRSVPTLVLF-RRGAPVATWVGASPRRVLEERLRPY 136 (140)
T ss_dssp --------------------------------TTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred --------------------------------CCCCccCEEEEE-eCCcEEEEEeCCCCHHHHHHHHHHH
Confidence 144455998888 7999999999999888888877653
No 178
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.41 E-value=5.8e-14 Score=95.83 Aligned_cols=90 Identities=17% Similarity=0.107 Sum_probs=69.0
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCC--CeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQ--DFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVN 142 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 142 (201)
++++++|.||++||++|+...|.+.++.+++++. ++.++.|..+. ..
T Consensus 23 ~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~~~~v~~~~vd~~~-------~~------------------------ 71 (120)
T 1mek_A 23 AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAEGSEIRLAKVDATE-------ES------------------------ 71 (120)
T ss_dssp HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTTCCCCBCEEEETTT-------CC------------------------
T ss_pred cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhccCCcEEEEEEcCCC-------CH------------------------
Confidence 5789999999999999999999999999999764 46777776541 00
Q ss_pred CCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEE--EecCCCCCchhhhhcccCCC
Q 028944 143 GKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVV--ERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~--~~~~g~~~~~~l~~~l~~ll 201 (201)
.. ... +++..+|+++++ ++|+++ ..+.|..+.+++.+.|++++
T Consensus 72 -~~-~~~-------------~~v~~~Pt~~~~-~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 72 -DL-AQQ-------------YGVRGYPTIKFF-RNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp -SS-HHH-------------HTCCSSSEEEEE-ESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred -HH-HHH-------------CCCCcccEEEEE-eCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 00 111 156666999999 689877 88899888888988887653
No 179
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.41 E-value=3.1e-13 Score=95.89 Aligned_cols=43 Identities=14% Similarity=-0.023 Sum_probs=39.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++++||+||++||++|+.+.|.++++.++++++ +.++.|++|
T Consensus 22 ~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d 64 (142)
T 1qgv_A 22 EDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF-AVIYLVDIT 64 (142)
T ss_dssp SSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-EEEEEEETT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC-eEEEEEccc
Confidence 4799999999999999999999999999999764 999999876
No 180
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.12 E-value=2e-14 Score=95.97 Aligned_cols=102 Identities=19% Similarity=0.201 Sum_probs=74.5
Q ss_pred ecCCCCeeecCC-CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 52 KDIRGNDVSLSG-YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 52 ~~~~G~~~~l~~-~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
.+.++..+...- -.+++++|.||++|||+|+...+.++++.+++++ ++.++.|+.|. .. +.. ++
T Consensus 4 ~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~-~~~~~~v~~~~-------~~----~~~-~~-- 68 (106)
T 2yj7_A 4 IEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEG-KVKVVKVNVDE-------NP----NTA-AQ-- 68 (106)
Confidence 344444443222 2468999999999999999999999999999875 48888886551 00 011 11
Q ss_pred cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 131 AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 131 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
+++..+|+++++ ++|+++.++.|..+.+++.+.|+++|
T Consensus 69 --------------------------------~~v~~~Pt~~~~-~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 69 --------------------------------YGIRSIPTLLLF-KNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 144555998888 89999999999998889999988765
No 181
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.40 E-value=4.8e-13 Score=93.71 Aligned_cols=85 Identities=6% Similarity=-0.049 Sum_probs=69.0
Q ss_pred cEEEEEEeecCC--CCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 67 KVLLVVNVASKC--GLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 67 k~~lv~f~~~~C--~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++||+||++|| ++|+...|.|.++.++|+++ +.++-|++|. -.+.. .+
T Consensus 34 ~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~-v~~~KVdvDe-----------~~~la-~~---------------- 84 (137)
T 2qsi_A 34 KIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR-LVAAEVAAEA-----------ERGLM-AR---------------- 84 (137)
T ss_dssp SEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT-EEEEEECGGG-----------HHHHH-HH----------------
T ss_pred CcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC-cEEEEEECCC-----------CHHHH-HH----------------
Confidence 499999999999 99999999999999999765 9999998761 12222 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|..+|+.+++ ++|+++.+..|..+.+++.+.|++
T Consensus 85 ------------------ygV~siPTlilF-kdG~~v~~~vG~~~k~~l~~~l~~ 120 (137)
T 2qsi_A 85 ------------------FGVAVCPSLAVV-QPERTLGVIAKIQDWSSYLAQIGA 120 (137)
T ss_dssp ------------------HTCCSSSEEEEE-ECCEEEEEEESCCCHHHHHHHHHH
T ss_pred ------------------cCCccCCEEEEE-ECCEEEEEEeCCCCHHHHHHHHHH
Confidence 266666997777 899999999999998888877764
No 182
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.40 E-value=4.3e-13 Score=102.02 Aligned_cols=102 Identities=17% Similarity=0.145 Sum_probs=75.3
Q ss_pred EecCCCCeeecCCC-CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhc
Q 028944 51 VKDIRGNDVSLSGY-RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMF 129 (201)
Q Consensus 51 l~~~~G~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~ 129 (201)
....+...+...-+ +++++||+||++||++|+.+.|.+.++.++++++ +.++.|+.|. ..+
T Consensus 14 ~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-v~~~~vd~d~-------~~~---------- 75 (222)
T 3dxb_A 14 IIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-LTVAKLNIDQ-------NPG---------- 75 (222)
T ss_dssp CEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CTT----------
T ss_pred ceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-cEEEEEECCC-------CHH----------
Confidence 34444555432212 5789999999999999999999999999999865 9999998762 000
Q ss_pred CcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 130 KAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 130 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
...+ ++|..+|+++++ ++|+++.++.|..+.+++.+.|+++
T Consensus 76 ---------------l~~~--------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 116 (222)
T 3dxb_A 76 ---------------TAPK--------------YGIRGIPTLLLF-KNGEVAATKVGALSKGQLKEFLDAN 116 (222)
T ss_dssp ---------------TGGG--------------GTCCSBSEEEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred ---------------HHHH--------------cCCCcCCEEEEE-ECCeEEEEeccccChHHHHHHHHhh
Confidence 0011 256666998777 5899999999999888888777643
No 183
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.39 E-value=2.8e-13 Score=92.33 Aligned_cols=85 Identities=18% Similarity=0.187 Sum_probs=65.3
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++++||.||++||++|+...|.++++.++++ ++.++.|+.|. .. +.. ++
T Consensus 27 ~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~~~~~~v~~~~-------~~----~~~-~~---------------- 76 (118)
T 2vm1_A 27 TGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP--GAIFLKVDVDE-------LK----DVA-EA---------------- 76 (118)
T ss_dssp HTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT--TSEEEEEETTT-------SH----HHH-HH----------------
T ss_pred CCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC--CcEEEEEEccc-------CH----HHH-HH----------------
Confidence 47899999999999999999999999999986 59999998761 11 112 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+++..+|+++++ ++|+++.++.| .+.+++.+.|++
T Consensus 77 ------------------~~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~ 111 (118)
T 2vm1_A 77 ------------------YNVEAMPTFLFI-KDGEKVDSVVG-GRKDDIHTKIVA 111 (118)
T ss_dssp ------------------TTCCSBSEEEEE-ETTEEEEEEES-CCHHHHHHHHHH
T ss_pred ------------------cCCCcCcEEEEE-eCCeEEEEecC-CCHHHHHHHHHH
Confidence 144455987776 79999999888 467777777654
No 184
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.37 E-value=1.8e-12 Score=83.18 Aligned_cols=83 Identities=13% Similarity=0.109 Sum_probs=63.9
Q ss_pred cEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCCCc
Q 028944 67 KVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKNA 146 (201)
Q Consensus 67 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 146 (201)
.++++.||++|||+|+...|.++++.+++++ ++.++.|+.|. +. ...
T Consensus 3 ~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~-------------------------~~~ 49 (85)
T 1fo5_A 3 KVKIELFTSPMCPHCPAAKRVVEEVANEMPD-AVEVEYINVME-------NP-------------------------QKA 49 (85)
T ss_dssp CEEEEEEECCCSSCCCTHHHHHHHHHHHCSS-SEEEEEEESSS-------SC-------------------------CTT
T ss_pred ceEEEEEeCCCCCchHHHHHHHHHHHHHcCC-ceEEEEEECCC-------CH-------------------------HHH
Confidence 4789999999999999999999999999974 59999998762 00 000
Q ss_pred hhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 147 APIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
.. +++..+|++++ +|++ ++.|..+.+++.+.|+++|
T Consensus 50 ~~--------------~~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 50 ME--------------YGIMAVPTIVI---NGDV--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp TS--------------TTTCCSSEEEE---TTEE--ECCSSSSSHHHHHHHHHHC
T ss_pred HH--------------CCCcccCEEEE---CCEE--eeecCCCHHHHHHHHHHhC
Confidence 01 25666699777 8988 7788878888988887654
No 185
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.37 E-value=3.8e-13 Score=92.29 Aligned_cols=98 Identities=18% Similarity=0.212 Sum_probs=71.9
Q ss_pred ecCCCCeeecC-CC--CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhh
Q 028944 52 KDIRGNDVSLS-GY--RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTM 128 (201)
Q Consensus 52 ~~~~G~~~~l~-~~--~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 128 (201)
.+.+|...++. .+ .++++||.||++||++|+...|.+.++.+++ .++.++.|+.|. .. +.. ++
T Consensus 6 ~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~--~~v~~~~vd~~~-------~~----~~~-~~ 71 (118)
T 2f51_A 6 VHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN--KDVTFIKVDVDK-------NG----NAA-DA 71 (118)
T ss_dssp EEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC--TTSEEEEEETTT-------CH----HHH-HH
T ss_pred eEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC--CCeEEEEEECCC-------CH----HHH-Hh
Confidence 34455555554 22 4789999999999999999999999999998 469999998762 21 111 11
Q ss_pred cCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECC---CCcEEEecCCCCCchhhhhccc
Q 028944 129 FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNK---EGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 129 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~---~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
+++..+|++++++. +|+++.++.|..+ +++++.++
T Consensus 72 ----------------------------------~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~ 109 (118)
T 2f51_A 72 ----------------------------------YGVSSIPALFFVKKEGNEIKTLDQFVGADV-SRIKADIE 109 (118)
T ss_dssp ----------------------------------TTCCSSSEEEEEEEETTEEEEEEEEESCCH-HHHHHHHH
T ss_pred ----------------------------------cCCCCCCEEEEEeCCCCcceEEEeecCCCH-HHHHHHHH
Confidence 14555599999975 4999999999874 45776654
No 186
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.37 E-value=9.5e-13 Score=92.53 Aligned_cols=88 Identities=6% Similarity=-0.077 Sum_probs=69.5
Q ss_pred CCcEEEEEEeecC--CCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccC
Q 028944 65 RGKVLLVVNVASK--CGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVN 142 (201)
Q Consensus 65 ~gk~~lv~f~~~~--C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 142 (201)
.++++||+||++| |++|+...|.|.++.++|+++.+.|+-|++| +-.+.. .+
T Consensus 33 ~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~~v~~~KVdvD-----------e~~~lA-~~-------------- 86 (140)
T 2qgv_A 33 QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLE-----------QSEAIG-DR-------------- 86 (140)
T ss_dssp TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTSCCEEEECCHH-----------HHHHHH-HH--------------
T ss_pred CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCCeEEEEEEECC-----------CCHHHH-HH--------------
Confidence 4568999999999 9999999999999999997644899999765 222222 22
Q ss_pred CCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 143 GKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|.++|+.+++ ++|+++.+..|..+.+++.+.|++
T Consensus 87 --------------------ygV~sIPTlilF-k~G~~v~~~~G~~~k~~l~~~i~~ 122 (140)
T 2qgv_A 87 --------------------FGAFRFPATLVF-TGGNYRGVLNGIHPWAELINLMRG 122 (140)
T ss_dssp --------------------HTCCSSSEEEEE-ETTEEEEEEESCCCHHHHHHHHHH
T ss_pred --------------------cCCccCCEEEEE-ECCEEEEEEecCCCHHHHHHHHHH
Confidence 266667987666 899999999999988888877754
No 187
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.34 E-value=1.8e-13 Score=94.00 Aligned_cols=87 Identities=16% Similarity=0.033 Sum_probs=64.9
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||.||++||++|+...|.+.++.+++++ ++.++.|+.+. .. +.. ++
T Consensus 20 ~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~-~~~~~~vd~~~-------~~----~~~-~~---------------- 70 (122)
T 3aps_A 20 GKTHWVVDFYAPWCGPCQNFAPEFELLARMIKG-KVRAGKVDCQA-------YP----QTC-QK---------------- 70 (122)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT-TCEEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcC-CeEEEEEeCcC-------CH----HHH-HH----------------
Confidence 468999999999999999999999999999976 49999998762 11 111 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCC----CCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPT----TSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~----~~~~~l~~~l~~ 199 (201)
+++..+|++++++++|+ +.++.|. .+.+++.+.|++
T Consensus 71 ------------------~~v~~~Pt~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~l~~ 110 (122)
T 3aps_A 71 ------------------AGIKAYPSVKLYQYERA-KKSIWEEQINSRDAKTIAALIYG 110 (122)
T ss_dssp ------------------TTCCSSSEEEEEEEEGG-GTEEEEEEECCSCHHHHHHHHHH
T ss_pred ------------------cCCCccceEEEEeCCCc-cceeeccccCcCCHHHHHHHHHH
Confidence 14555599999988777 3444443 677777776654
No 188
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.32 E-value=1.6e-12 Score=99.39 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=73.6
Q ss_pred EecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCC--eEEEEeecCCCCCCCCCCHHHHHHHHHhh
Q 028944 51 VKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQD--FEVLAFPCNQFAGQEPGSNEEIQEVACTM 128 (201)
Q Consensus 51 l~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d~~~~~~~~~~~~~~~~~~~~ 128 (201)
+...++..+.....+|++++|+||++||++|+.+.|.+.++.+++++++ +.++.|+.+. .. +.. ++
T Consensus 17 v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~~~~~vd~~~-------~~----~l~-~~ 84 (241)
T 3idv_A 17 VLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDKDPPIPVAKIDATS-------AS----VLA-SR 84 (241)
T ss_dssp EEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTSSSCCCEEEEETTT-------CH----HHH-HH
T ss_pred cEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhcCCceEEEEEeccC-------CH----HHH-Hh
Confidence 4445566665444578999999999999999999999999999998765 8888887651 11 112 21
Q ss_pred cCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhccc
Q 028944 129 FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 129 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
++|..+|++++++ +|+.+ .+.|..+.+++.+.++
T Consensus 85 ----------------------------------~~v~~~Pt~~~~~-~g~~~-~~~g~~~~~~l~~~i~ 118 (241)
T 3idv_A 85 ----------------------------------FDVSGYPTIKILK-KGQAV-DYEGSRTQEEIVAKVR 118 (241)
T ss_dssp ----------------------------------TTCCSSSEEEEEE-TTEEE-ECCSCSCHHHHHHHHH
T ss_pred ----------------------------------cCCCcCCEEEEEc-CCCcc-cccCcccHHHHHHHHh
Confidence 1455559988885 67777 5888888887777664
No 189
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.31 E-value=1.8e-12 Score=91.00 Aligned_cols=82 Identities=12% Similarity=0.085 Sum_probs=63.3
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+|+++||+||++||++|+.+.|.+.++.+++. ++.++.|+.+. .. ++
T Consensus 29 ~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~--~v~~~~vd~~~-------~~--------~~---------------- 75 (135)
T 2dbc_A 29 KDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP--ETKFVKAIVNS-------CI--------EH---------------- 75 (135)
T ss_dssp SSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS--SEEEEEECCSS-------SC--------SS----------------
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCC--CcEEEEEEhhc-------Cc--------cc----------------
Confidence 45899999999999999999999999999985 48898887652 00 01
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC-------Cchhhhhccc
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT-------SPLKIEVGTT 198 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~-------~~~~l~~~l~ 198 (201)
++|..+|++++++ +|+++.++.|.. +.+++++.|+
T Consensus 76 ------------------~~i~~~Pt~~~~~-~G~~v~~~~G~~~~~~~~~~~~~l~~~l~ 117 (135)
T 2dbc_A 76 ------------------YHDNCLPTIFVYK-NGQIEGKFIGIIECGGINLKLEELEWKLS 117 (135)
T ss_dssp ------------------CCSSCCSEEEEES-SSSCSEEEESTTTTTCTTCCHHHHHHHHH
T ss_pred ------------------CCCCCCCEEEEEE-CCEEEEEEEeEEeeCCCcCCHHHHHHHHH
Confidence 2556669988885 999998888865 4566666554
No 190
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.31 E-value=2.2e-12 Score=82.71 Aligned_cols=82 Identities=12% Similarity=0.078 Sum_probs=61.5
Q ss_pred EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCCCch
Q 028944 68 VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKNAA 147 (201)
Q Consensus 68 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 147 (201)
+.++.||++|||+|+...|.++++.+++++ ++.++.|+.|. +.+ . .
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~~~vd~~~-------~~~----~----------------------~ 48 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFGD-KIDVEKIDIMV-------DRE----K----------------------A 48 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHCS-SCCEEEECTTT-------CGG----G----------------------G
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhcC-CeEEEEEECCC-------CHH----H----------------------H
Confidence 468999999999999999999999999975 48899987651 110 0 0
Q ss_pred hhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCCC
Q 028944 148 PIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIPL 201 (201)
Q Consensus 148 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 201 (201)
.. +++..+|++++ +|++ ++.|..+.+++.+.|+++|
T Consensus 49 ~~-------------~~v~~~Pt~~~---~G~~--~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 49 IE-------------YGLMAVPAIAI---NGVV--RFVGAPSREELFEAINDEM 84 (85)
T ss_dssp GG-------------TCSSCSSEEEE---TTTE--EEECSSCCHHHHHHHHHHC
T ss_pred Hh-------------CCceeeCEEEE---CCEE--EEccCCCHHHHHHHHHHHh
Confidence 00 25666699877 8998 6677777888888876543
No 191
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.28 E-value=4.1e-13 Score=93.14 Aligned_cols=87 Identities=17% Similarity=0.151 Sum_probs=64.9
Q ss_pred CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCC
Q 028944 64 YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNG 143 (201)
Q Consensus 64 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 143 (201)
.++++++|.||++||++|+...|.+.++.++++ ++.++.|+.|. ..+ ..
T Consensus 34 ~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~--~v~~~~v~~~~-------~~~----~~------------------ 82 (130)
T 1wmj_A 34 EAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP--GAVFLKVDVDE-------LKE----VA------------------ 82 (130)
T ss_dssp TTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT--TBCCEECCTTT-------SGG----GH------------------
T ss_pred hcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC--CCEEEEEeccc-------hHH----HH------------------
Confidence 358999999999999999999999999999986 58888887651 111 01
Q ss_pred CCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 144 KNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
.. +++..+|+++++ ++|+++.++.| .+.+++.+.|+++
T Consensus 83 ----~~-------------~~v~~~Pt~~~~-~~g~~~~~~~g-~~~~~l~~~l~~~ 120 (130)
T 1wmj_A 83 ----EK-------------YNVEAMPTFLFI-KDGAEADKVVG-ARKDDLQNTIVKH 120 (130)
T ss_dssp ----HH-------------HTCCSSCCCCBC-TTTTCCBCCCT-TCTTTHHHHHHHH
T ss_pred ----HH-------------cCCCccceEEEE-eCCeEEEEEeC-CCHHHHHHHHHHH
Confidence 11 145555986655 89999988888 4667777766543
No 192
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.26 E-value=6.3e-12 Score=95.37 Aligned_cols=88 Identities=8% Similarity=-0.074 Sum_probs=66.8
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC---CCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccC
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKN---QDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVN 142 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~---~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 142 (201)
+++++|.||++||++|+.+.|.++++.+++++ .++.++.|+.+. .. +.. ++
T Consensus 134 ~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~~v~~~~vd~~~-------~~----~l~-~~-------------- 187 (226)
T 1a8l_A 134 QDVRILVFVTPTCPYCPLAVRMAHKFAIENTKAGKGKILGDMVEAIE-------YP----EWA-DQ-------------- 187 (226)
T ss_dssp SCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEGGG-------CH----HHH-HH--------------
T ss_pred CCcEEEEEeCCCCCccHHHHHHHHHHHHhcccccCCcEEEEEEEccc-------CH----HHH-Hh--------------
Confidence 44559999999999999999999999999973 359999997651 11 111 11
Q ss_pred CCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 143 GKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|..+|+++++ ++|+.+.++.|..+.+++.+.|+++
T Consensus 188 --------------------~~v~~~Pt~~~~-~~G~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 188 --------------------YNVMAVPKIVIQ-VNGEDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp --------------------TTCCSSCEEEEE-ETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred --------------------CCCcccCeEEEE-eCCceeEEEcCCCCHHHHHHHHHHh
Confidence 255556996665 6999999999999888888877653
No 193
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.25 E-value=8e-12 Score=91.32 Aligned_cols=88 Identities=8% Similarity=-0.090 Sum_probs=58.6
Q ss_pred CeeecCCCCCcEEEEEEeecCCCCcHHhHHH---HHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCccc
Q 028944 57 NDVSLSGYRGKVLLVVNVASKCGLTQSNYKE---LNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEF 133 (201)
Q Consensus 57 ~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~---l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (201)
..+.....+||++||+||++||++|+.+.+. ..++.+.+.+ ++.++.|..| +.++..+.|+...
T Consensus 30 ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~-~fv~ikVD~d-------e~~~l~~~y~~~~----- 96 (173)
T 3ira_A 30 EAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNE-AFVSIKVDRE-------ERPDIDNIYMTVC----- 96 (173)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHH-HCEEEEEETT-------TCHHHHHHHHHHH-----
T ss_pred HHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHh-cCceeeeCCc-------ccCcHHHHHHHHH-----
Confidence 3444455578999999999999999998873 2345555533 4778888765 2344434443110
Q ss_pred ceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEe
Q 028944 134 PIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVER 183 (201)
Q Consensus 134 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~ 183 (201)
... +++.++|+++++|++|+++..
T Consensus 97 -------------q~~-------------~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 97 -------------QII-------------LGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp -------------HHH-------------HSCCCSSEEEEECTTSCEEEE
T ss_pred -------------HHH-------------cCCCCCcceeeECCCCCceee
Confidence 000 155666999999999999876
No 194
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.24 E-value=1.8e-11 Score=84.06 Aligned_cols=82 Identities=12% Similarity=0.059 Sum_probs=62.6
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCCC
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKN 145 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 145 (201)
++++||.||++||++|+...|.|.++.++|++ +.++-|++|. . . ++
T Consensus 23 ~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~--v~f~kvd~d~-----------~---~-~~----------------- 68 (118)
T 3evi_A 23 DVWVIIHLYRSSIPMCLLVNQHLSLLARKFPE--TKFVKAIVNS-----------C---I-QH----------------- 68 (118)
T ss_dssp TCEEEEEEECTTSHHHHHHHHHHHHHHHHCTT--SEEEEEEGGG-----------T---S-TT-----------------
T ss_pred CCeEEEEEeCCCChHHHHHHHHHHHHHHHCCC--CEEEEEEhHH-----------h---H-HH-----------------
Confidence 45999999999999999999999999999963 8999987651 0 0 11
Q ss_pred chhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCC-------CchhhhhcccC
Q 028944 146 AAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTT-------SPLKIEVGTTI 199 (201)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~-------~~~~l~~~l~~ 199 (201)
++|..+|+.+++ ++|+.+.++.|.. +.++++..|.+
T Consensus 69 -----------------~~v~~~PT~~~f-k~G~~v~~~~G~~~~gg~~~~~~~le~~L~~ 111 (118)
T 3evi_A 69 -----------------YHDNCLPTIFVY-KNGQIEAKFIGIIECGGINLKLEELEWKLAE 111 (118)
T ss_dssp -----------------CCGGGCSEEEEE-ETTEEEEEEESTTTTTCSSCCHHHHHHHHHT
T ss_pred -----------------CCCCCCCEEEEE-ECCEEEEEEeChhhhCCCCCCHHHHHHHHHH
Confidence 256666996666 7999999987764 45566666643
No 195
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.23 E-value=1.2e-11 Score=95.12 Aligned_cols=44 Identities=23% Similarity=0.204 Sum_probs=40.0
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC--CCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKN--QDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~vv~vs~d 108 (201)
.++++||.||++||++|+.+.|.+.++++++++ .++.++.|+.+
T Consensus 29 ~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~ 74 (244)
T 3q6o_A 29 SRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAWRPALYLAALDCA 74 (244)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGGTTTEEEEEEETT
T ss_pred CCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhccCcEEEEEEeCC
Confidence 358999999999999999999999999999986 36999999875
No 196
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.23 E-value=8.2e-12 Score=88.54 Aligned_cols=84 Identities=7% Similarity=0.028 Sum_probs=57.1
Q ss_pred cEEEEEEeecC--CCCcHHhHHHHHHHHHHhcCCCeE--EEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccC
Q 028944 67 KVLLVVNVASK--CGLTQSNYKELNVLYEKYKNQDFE--VLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVN 142 (201)
Q Consensus 67 k~~lv~f~~~~--C~~C~~~~~~l~~~~~~~~~~~~~--vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 142 (201)
+.+||+|+++| |++|+...|.+.++.++| + ++. ++.|++| +-.+.. ++
T Consensus 35 ~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~-~v~~~~~~Vd~d-----------~~~~la-~~-------------- 86 (142)
T 2es7_A 35 GDGVILLSSDPRRTPEVSDNPVMIAELLREF-P-QFDWQVAVADLE-----------QSEAIG-DR-------------- 86 (142)
T ss_dssp CSEEEEECCCSCC----CCHHHHHHHHHHTC-T-TSCCEEEEECHH-----------HHHHHH-HT--------------
T ss_pred CCEEEEEECCCCCCccHHHHHHHHHHHHHHh-c-ccceeEEEEECC-----------CCHHHH-Hh--------------
Confidence 45778888877 999999999999999999 4 477 8888654 212222 11
Q ss_pred CCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 143 GKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|..+|+++++ ++|+++.++.|..+.+++.+.|++
T Consensus 87 --------------------~~V~~iPT~~~f-k~G~~v~~~~G~~~~~~l~~~i~~ 122 (142)
T 2es7_A 87 --------------------FNVRRFPATLVF-TDGKLRGALSGIHPWAELLTLMRS 122 (142)
T ss_dssp --------------------TTCCSSSEEEEE-SCC----CEESCCCHHHHHHHHHH
T ss_pred --------------------cCCCcCCeEEEE-eCCEEEEEEeCCCCHHHHHHHHHH
Confidence 256666999999 899999999999888888877754
No 197
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.23 E-value=1.4e-12 Score=93.41 Aligned_cols=76 Identities=13% Similarity=0.127 Sum_probs=51.2
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHH--HHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLY--EKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVN 142 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~--~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 142 (201)
+||++||+||++||++|+.+.|.+.+.. .++.+.++ +.|.+|. ++.+. ...
T Consensus 43 ~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~~~~~~~~~f--v~V~vD~------e~~~~-----~~~-------------- 95 (151)
T 3ph9_A 43 SKKPLMVIHHLEDCQYSQALKKVFAQNEEIQEMAQNKF--IMLNLMH------ETTDK-----NLS-------------- 95 (151)
T ss_dssp HTCCEEEEECCTTCHHHHHHHHHHHHCHHHHHHHHHTC--EEEEESS------CCSCG-----GGC--------------
T ss_pred cCCcEEEEEECCCCHhHHHHHHHHhcCHHHHHHhhcCe--EEEEecC------Cchhh-----Hhh--------------
Confidence 5899999999999999999999888642 22222234 4444431 00000 000
Q ss_pred CCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCC
Q 028944 143 GKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPT 187 (201)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~ 187 (201)
+++.++|+++++|++|+++.+..|.
T Consensus 96 --------------------~~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 96 --------------------PDGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp --------------------TTCCCSSEEEEECTTSCBCTTCCCS
T ss_pred --------------------cCCCCCCEEEEECCCCCEEEEEeCC
Confidence 1445559999999999999998887
No 198
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.22 E-value=2.1e-11 Score=82.18 Aligned_cols=87 Identities=11% Similarity=0.248 Sum_probs=64.5
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCCC
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKN 145 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 145 (201)
+++++|+|+|+|||+|+...|.++++.++ . ++.++-|.+| ....+-..+.++
T Consensus 24 ~~~vvi~khatwCgpc~~~~~~~e~~~~~-~--~v~~~~vdVd--------e~r~~Sn~IA~~----------------- 75 (112)
T 3iv4_A 24 NKYVFVLKHSETCPISANAYDQFNKFLYE-R--DMDGYYLIVQ--------QERDLSDYIAKK----------------- 75 (112)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHH-H--TCCEEEEEGG--------GGHHHHHHHHHH-----------------
T ss_pred CCCEEEEEECCcCHhHHHHHHHHHHHhcc-C--CceEEEEEee--------cCchhhHHHHHH-----------------
Confidence 68999999999999999999999999875 2 4777777665 222222222222
Q ss_pred chhhHHHHHhhcCCcccccccc-cceEEEECCCCcEEEe-cCCCCCchhhhhccc
Q 028944 146 AAPIYKFLKSEKGGFLGDAIKW-NFTKFLVNKEGKVVER-YAPTTSPLKIEVGTT 198 (201)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~i~~-~P~~~lid~~G~i~~~-~~g~~~~~~l~~~l~ 198 (201)
++|.| .|+.+++ ++|+++.+ ..+..+.+.++++++
T Consensus 76 -----------------~~V~h~sPq~il~-k~G~~v~~~SH~~I~~~~l~~~~e 112 (112)
T 3iv4_A 76 -----------------TNVKHESPQAFYF-VNGEMVWNRDHGDINVSSLAQAEE 112 (112)
T ss_dssp -----------------HTCCCCSSEEEEE-ETTEEEEEEEGGGCSHHHHHHHTC
T ss_pred -----------------hCCccCCCeEEEE-ECCEEEEEeeccccCHHHHHHhhC
Confidence 26665 6997777 79999888 677778888887764
No 199
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.21 E-value=3.9e-11 Score=95.18 Aligned_cols=91 Identities=14% Similarity=0.087 Sum_probs=67.4
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||+||++||++|+.+.|.+.++.+++.++ +.++.|++|. +.. .+.. ++
T Consensus 34 ~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-~~~~~v~~d~------~~~---~~l~-~~---------------- 86 (298)
T 3ed3_A 34 TNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-VQVAAVNCDL------NKN---KALC-AK---------------- 86 (298)
T ss_dssp SSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTS------TTT---HHHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC-cEEEEEEccC------ccC---HHHH-Hh----------------
Confidence 4689999999999999999999999999999865 8899998762 111 1122 11
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCC----------------cEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEG----------------KVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G----------------~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|..+|+++++++.+ .....|.|..+.+.+.+.+.+.
T Consensus 87 ------------------~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~fl~~~ 140 (298)
T 3ed3_A 87 ------------------YDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVDFSLSR 140 (298)
T ss_dssp ------------------TTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHHHHHTT
T ss_pred ------------------CCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHHHHHHh
Confidence 1455558888887533 1466789999888888777553
No 200
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.21 E-value=7.1e-12 Score=106.43 Aligned_cols=105 Identities=12% Similarity=0.050 Sum_probs=75.4
Q ss_pred EecCCCCeeecCCC-CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC--CCeEEEEeecCCCCCCCCCCHHHHHHHHHh
Q 028944 51 VKDIRGNDVSLSGY-RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKN--QDFEVLAFPCNQFAGQEPGSNEEIQEVACT 127 (201)
Q Consensus 51 l~~~~G~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~--~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~ 127 (201)
+...++..+...-. .++++||+||++||++|+.+.|.+.++++++++ .++.++.|+.|. + +..+.. +
T Consensus 14 V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~~~~v~~~~VD~d~------d---~~~~l~-~ 83 (519)
T 3t58_A 14 LTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDWRPALNLAVLDCAE------E---TNSAVC-R 83 (519)
T ss_dssp SEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGGTTTEEEEEEETTS------G---GGHHHH-H
T ss_pred cEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCcCCcEEEEEEECCc------c---ccHHHH-H
Confidence 33444544432222 358999999999999999999999999999986 369999998761 1 111222 1
Q ss_pred hcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECC---CCcEEEecCCCCCchhhhhcccC
Q 028944 128 MFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNK---EGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 128 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~---~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+ ++|..+|+++++++ +|+.+..+.|..+.+.+++.|++
T Consensus 84 ~----------------------------------~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~ 124 (519)
T 3t58_A 84 E----------------------------------FNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLID 124 (519)
T ss_dssp H----------------------------------TTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHH
T ss_pred H----------------------------------cCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHH
Confidence 1 25566699999997 78887788888888877776643
No 201
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.18 E-value=2.3e-10 Score=71.86 Aligned_cols=36 Identities=14% Similarity=0.047 Sum_probs=31.8
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEe
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAF 105 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~v 105 (201)
..|.||++||++|+...|.++++.++++. ++.++.|
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~~-~~~~~~v 37 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELGI-DAEFEKI 37 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTTC-CEEEEEE
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcCC-ceEEEEe
Confidence 46899999999999999999999999875 4888887
No 202
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.18 E-value=5.3e-11 Score=91.73 Aligned_cols=86 Identities=9% Similarity=0.023 Sum_probs=63.3
Q ss_pred CCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhc---CCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeee
Q 028944 63 GYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYK---NQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKI 139 (201)
Q Consensus 63 ~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~---~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (201)
++.+++.++.||++|||+|+...|.++++..+++ +.++.+..|..+. .++ .. ++
T Consensus 135 ~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~~~~~v~~~~vd~~~-------~~~----~~-~~----------- 191 (243)
T 2hls_A 135 SLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQGNPVILSEAVEAYE-------NPD----IA-DK----------- 191 (243)
T ss_dssp HCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHTTCCCEEEEEEETTT-------CHH----HH-HH-----------
T ss_pred HcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccccCCcEEEEEEECcc-------CHH----HH-HH-----------
Confidence 3567899999999999999999999999999984 2468888887651 111 11 11
Q ss_pred ccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 140 DVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 140 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|..+|++++ +|+++ +.|..+.+++.+.|++
T Consensus 192 -----------------------~~V~~vPt~~i---~G~~~--~~G~~~~~~l~~~l~~ 223 (243)
T 2hls_A 192 -----------------------YGVMSVPSIAI---NGYLV--FVGVPYEEDFLDYVKS 223 (243)
T ss_dssp -----------------------TTCCSSSEEEE---TTEEE--EESCCCHHHHHHHHHH
T ss_pred -----------------------cCCeeeCeEEE---CCEEE--EeCCCCHHHHHHHHHH
Confidence 14555599887 78875 7788888877776653
No 203
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.15 E-value=2.2e-11 Score=102.41 Aligned_cols=100 Identities=12% Similarity=0.089 Sum_probs=73.7
Q ss_pred cCCCCeeecCCC-CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCC-CeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 53 DIRGNDVSLSGY-RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQ-DFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 53 ~~~G~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
...|+.+...-. .+|++||+||++||++|+.+.|.+.++.+++++. ++.++.|..+. +
T Consensus 356 ~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~~~v~~~~id~~~------------------~-- 415 (481)
T 3f8u_A 356 VVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATA------------------N-- 415 (481)
T ss_dssp EECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTS------------------S--
T ss_pred EecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccCCCEEEEEEECCc------------------h--
Confidence 344555432222 4799999999999999999999999999999875 68888887551 0
Q ss_pred cccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcE-EEecCCCCCchhhhhcccC
Q 028944 131 AEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKV-VERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 131 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i-~~~~~g~~~~~~l~~~l~~ 199 (201)
.. ... ++|..+|++++++++|++ ..++.|..+.+++.+.|++
T Consensus 416 -~~------------~~~--------------~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~ 458 (481)
T 3f8u_A 416 -DV------------PSP--------------YEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQR 458 (481)
T ss_dssp -CC------------CTT--------------CCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHH
T ss_pred -hh------------Hhh--------------CCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHH
Confidence 00 000 255666999999988874 5678999888888877653
No 204
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.14 E-value=7.3e-11 Score=90.92 Aligned_cols=42 Identities=10% Similarity=0.011 Sum_probs=37.7
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
+++++||.||++||++|+.+.|.+.++.++|.+ +.++.|..+
T Consensus 132 ~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~--v~f~kVd~d 173 (245)
T 1a0r_P 132 KITTIVVHIYEDGIKGCDALNSSLICLAAEYPM--VKFCKIKAS 173 (245)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT--SEEEEEEHH
T ss_pred CCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC--CEEEEEeCC
Confidence 478999999999999999999999999999964 889988643
No 205
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.13 E-value=1.7e-10 Score=93.35 Aligned_cols=87 Identities=9% Similarity=0.046 Sum_probs=66.8
Q ss_pred CCcEEEEEEeecCCCCcHHhHHH-------HHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceee
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKE-------LNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFD 137 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~-------l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (201)
+++++||.||++||+ |+.+.|. ++++.+.+++.++.++.|+.+. .. +.. ++
T Consensus 27 ~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~~v~~~~Vd~~~-------~~----~l~-~~--------- 84 (350)
T 1sji_A 27 KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHKDIGFVMVDAKK-------EA----KLA-KK--------- 84 (350)
T ss_dssp TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGSSEEEEEEETTT-------TH----HHH-HH---------
T ss_pred hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhcCcEEEEEeCCC-------CH----HHH-Hh---------
Confidence 468999999999999 9989888 8899999887679999998762 11 112 11
Q ss_pred eeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 138 KIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 138 ~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
++|...|+++++ ++|+ +..|.|..+.+.+.+.+++.
T Consensus 85 -------------------------~~v~~~Pt~~~~-~~g~-~~~~~G~~~~~~l~~~i~~~ 120 (350)
T 1sji_A 85 -------------------------LGFDEEGSLYVL-KGDR-TIEFDGEFAADVLVEFLLDL 120 (350)
T ss_dssp -------------------------HTCCSTTEEEEE-ETTE-EEEECSCCCHHHHHHHHHTT
T ss_pred -------------------------cCCCccceEEEE-ECCc-EEEecCCCCHHHHHHHHHHh
Confidence 144555998888 7888 45889999888888877654
No 206
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.13 E-value=1.3e-10 Score=94.20 Aligned_cols=87 Identities=14% Similarity=0.064 Sum_probs=68.7
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCC-CeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQ-DFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNG 143 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 143 (201)
.+++++|.||++||++|+.+.|.+.++.++++++ ++.++.|..+. .. . ++
T Consensus 266 ~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~-------~~------~-~~--------------- 316 (361)
T 3uem_A 266 EKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTA-------NE------V-EA--------------- 316 (361)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTT-------CB------C-SS---------------
T ss_pred CCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCc-------cc------h-hh---------------
Confidence 5789999999999999999999999999999876 58888876541 00 0 00
Q ss_pred CCchhhHHHHHhhcCCcccccccccceEEEECCC-CcEEEecCCCCCchhhhhcccC
Q 028944 144 KNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKE-GKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~-G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|...|++++++++ |+....|.|..+.+.+.+.|++
T Consensus 317 -------------------~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~ 354 (361)
T 3uem_A 317 -------------------VKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLES 354 (361)
T ss_dssp -------------------CCCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTT
T ss_pred -------------------cCCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHh
Confidence 155556999999665 6777889999999999888765
No 207
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.12 E-value=7.9e-11 Score=81.14 Aligned_cols=96 Identities=9% Similarity=-0.073 Sum_probs=65.6
Q ss_pred CCCCCcEEEEEEeec-------CCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccc
Q 028944 62 SGYRGKVLLVVNVAS-------KCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFP 134 (201)
Q Consensus 62 ~~~~gk~~lv~f~~~-------~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (201)
.+.++++++|.||++ |||+|+...|.+.++.+++++ ++.++.|+++ +... |. +
T Consensus 20 ~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~-~~~~~~vd~~--------~~~~---~~-d------- 79 (123)
T 1wou_A 20 EQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISE-GCVFIYCQVG--------EKPY---WK-D------- 79 (123)
T ss_dssp HTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCT-TEEEEEEECC--------CHHH---HH-C-------
T ss_pred HHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCC-CcEEEEEECC--------Cchh---hh-c-------
Confidence 334589999999999 999999999999999999875 5999999876 2211 11 1
Q ss_pred eeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 135 IFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 135 ~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
.... .... ++|.++|+++++++.+++. .+.+ .+.+.+++.|++
T Consensus 80 ------~~~~-~~~~-------------~~i~~~Pt~~~~~~~~~~~-g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 80 ------PNND-FRKN-------------LKVTAVPTLLKYGTPQKLV-ESEC-LQANLVEMLFSE 122 (123)
T ss_dssp ------TTCH-HHHH-------------HCCCSSSEEEETTSSCEEE-GGGG-GCHHHHHHHHHC
T ss_pred ------hhHH-HHHH-------------CCCCeeCEEEEEcCCceEe-cccc-CCHHHHHHHHhc
Confidence 1111 1111 2677779999998744443 3344 356677777654
No 208
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.12 E-value=5.5e-13 Score=89.94 Aligned_cols=39 Identities=13% Similarity=0.088 Sum_probs=33.2
Q ss_pred eeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhc
Q 028944 58 DVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYK 96 (201)
Q Consensus 58 ~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~ 96 (201)
.+++++..+++.||.||++|||+|+.+.|.+.++.+++.
T Consensus 4 ~~~la~~~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~~ 42 (106)
T 3kp8_A 4 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQVP 42 (106)
T ss_dssp HHHHHHHHHHHTCEEEECTTCHHHHHHHHHHGGGGGGSC
T ss_pred hhHHHHhcCCCEEEEEECCCCHHHHHHHHHHHHHHHhCC
Confidence 456666778889999999999999999999999876653
No 209
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.12 E-value=7.7e-11 Score=89.33 Aligned_cols=85 Identities=11% Similarity=0.033 Sum_probs=64.2
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+|+++||.||++||++|+...|.+.++.++|. ++.++.|..+ - .. +
T Consensus 119 ~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~--~v~f~~vd~~----------------~-~~-------l-------- 164 (217)
T 2trc_P 119 KVTTIVVNIYEDGVRGCDALNSSLECLAAEYP--MVKFCKIRAS----------------N-TG-------A-------- 164 (217)
T ss_dssp TTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT--TSEEEEEEHH----------------H-HT-------C--------
T ss_pred CCcEEEEEEECCCCccHHHHHHHHHHHHHHCC--CeEEEEEECC----------------c-HH-------H--------
Confidence 45899999999999999999999999999985 5888888532 0 10 0
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCc-------hhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSP-------LKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~-------~~l~~~l~~ 199 (201)
... ++|..+|+++++ ++|+++.++.|..+. ++++..|.+
T Consensus 165 -~~~--------------~~i~~~PTl~~~-~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~ 210 (217)
T 2trc_P 165 -GDR--------------FSSDVLPTLLVY-KGGELISNFISVAEQFAEDFFAADVESFLNE 210 (217)
T ss_dssp -STT--------------SCGGGCSEEEEE-ETTEEEEEETTGGGGSCSSCCHHHHHHHHHT
T ss_pred -HHH--------------CCCCCCCEEEEE-ECCEEEEEEeCCcccCcccCCHHHHHHHHHH
Confidence 000 256666998888 599999999887764 667766654
No 210
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.12 E-value=1.3e-10 Score=88.72 Aligned_cols=87 Identities=13% Similarity=0.101 Sum_probs=66.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCC--eEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQD--FEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVN 142 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~--~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 142 (201)
.+++++|.||++||++|+.+.|.+.++.+++.+++ +.++.|..+. .. +.. ++
T Consensus 146 ~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~~~~v~~~~vd~~~-------~~----~l~-~~-------------- 199 (241)
T 3idv_A 146 DADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATA-------ET----DLA-KR-------------- 199 (241)
T ss_dssp HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTSSSCCCEEEEETTT-------CH----HHH-HH--------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhccCCcEEEEEEECCC-------CH----HHH-HH--------------
Confidence 45899999999999999999999999999997653 8888887651 11 112 22
Q ss_pred CCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 143 GKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|..+|++++++ +|+.+. |.|..+.+++.+.|++
T Consensus 200 --------------------~~v~~~Pt~~~~~-~g~~~~-~~g~~~~~~l~~~l~~ 234 (241)
T 3idv_A 200 --------------------FDVSGYPTLKIFR-KGRPYD-YNGPREKYGIVDYMIE 234 (241)
T ss_dssp --------------------TTCCSSSEEEEEE-TTEEEE-CCSCCSHHHHHHHHHH
T ss_pred --------------------cCCcccCEEEEEE-CCeEEE-ecCCCCHHHHHHHHHh
Confidence 1445559888886 688876 8999988888887754
No 211
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.11 E-value=3.4e-11 Score=98.62 Aligned_cols=101 Identities=16% Similarity=0.118 Sum_probs=71.1
Q ss_pred ecCCCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcC-----CCeEEEEeecCCCCCCCCCCHHHHHHHHH
Q 028944 52 KDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKN-----QDFEVLAFPCNQFAGQEPGSNEEIQEVAC 126 (201)
Q Consensus 52 ~~~~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-----~~~~vv~vs~d~~~~~~~~~~~~~~~~~~ 126 (201)
.+.++..+...--+++++||.||++||++|+...|.+.++.+++++ .++.++.|+.+. . .+..
T Consensus 8 ~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~-------~----~~l~- 75 (382)
T 2r2j_A 8 TSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEFPNENQVVFARVDCDQ-------H----SDIA- 75 (382)
T ss_dssp CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC---CCEEEEEEETTT-------C----HHHH-
T ss_pred EECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCCCCceEEEEEECCc-------c----HHHH-
Confidence 3444444432112468999999999999999999999999999953 248899987661 1 1122
Q ss_pred hhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEE-ecCCCCCchhhhhcccC
Q 028944 127 TMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVE-RYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 127 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~-~~~g~~~~~~l~~~l~~ 199 (201)
++ ++|...|+++++ ++|+++. .|.|..+.+.+.+.+++
T Consensus 76 ~~----------------------------------~~v~~~Pt~~~f-~~G~~~~~~~~G~~~~~~l~~~i~~ 114 (382)
T 2r2j_A 76 QR----------------------------------YRISKYPTLKLF-RNGMMMKREYRGQRSVKALADYIRQ 114 (382)
T ss_dssp HH----------------------------------TTCCEESEEEEE-ETTEEEEEECCSCCSHHHHHHHHHH
T ss_pred Hh----------------------------------cCCCcCCEEEEE-eCCcEeeeeecCcchHHHHHHHHHH
Confidence 22 145555987766 6899887 49999888888776643
No 212
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.07 E-value=1.2e-10 Score=98.48 Aligned_cols=88 Identities=14% Similarity=0.111 Sum_probs=68.9
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
+++++||.||++||++|+...|.+.++.+++++.++.++.|+.+. . .+.. ++
T Consensus 30 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~~v~~~~vd~~~-------~----~~l~-~~---------------- 81 (504)
T 2b5e_A 30 SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEKNITLAQIDCTE-------N----QDLC-ME---------------- 81 (504)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTTTCEEEEEETTT-------C----HHHH-HH----------------
T ss_pred cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccCCeEEEEEECCC-------C----HHHH-Hh----------------
Confidence 478999999999999999999999999999987779999998762 1 1222 22
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcE--EEecCCCCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKV--VERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i--~~~~~g~~~~~~l~~~l~~ 199 (201)
++|.+.|+++++. +|+. +..|.|..+.+.+.+.+++
T Consensus 82 ------------------~~v~~~Pt~~~~~-~g~~~~~~~~~G~~~~~~l~~~l~~ 119 (504)
T 2b5e_A 82 ------------------HNIPGFPSLKIFK-NSDVNNSIDYEGPRTAEAIVQFMIK 119 (504)
T ss_dssp ------------------TTCCSSSEEEEEE-TTCTTCEEECCSCCSHHHHHHHHHH
T ss_pred ------------------cCCCcCCEEEEEe-CCccccceeecCCCCHHHHHHHHHH
Confidence 1445559988885 5776 7789999888888777653
No 213
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.07 E-value=1.4e-11 Score=83.90 Aligned_cols=90 Identities=9% Similarity=-0.049 Sum_probs=58.1
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhc-CCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYK-NQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNG 143 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 143 (201)
+...+||+||++||++|+..-+.+...++... .+.+.++-|.++. +++ .
T Consensus 17 ~~~~~LV~F~A~wC~~Ck~~~~~i~~~~~~~a~~~~~~l~~vdv~~------~~~--------~---------------- 66 (116)
T 3dml_A 17 KAELRLLMFEQPGCLYCARWDAEIAPQYPLTDEGRAAPVQRLQMRD------PLP--------P---------------- 66 (116)
T ss_dssp --CEEEEEEECTTCHHHHHHHHHTTTTGGGSHHHHHSCEEEEETTS------CCC--------T----------------
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHhhHHHhhhcccceEEEEECCC------CCc--------h----------------
Confidence 34689999999999999988765443322110 0124555555541 000 0
Q ss_pred CCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 144 KNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
..+ .. ++|..+|++++++ +|+.+.+..|..+++.+.+.|++
T Consensus 67 ~la-~~-------------~~V~g~PT~i~f~-~G~ev~Ri~G~~~~~~f~~~L~~ 107 (116)
T 3dml_A 67 GLE-LA-------------RPVTFTPTFVLMA-GDVESGRLEGYPGEDFFWPMLAR 107 (116)
T ss_dssp TCB-CS-------------SCCCSSSEEEEEE-TTEEEEEEECCCCHHHHHHHHHH
T ss_pred hHH-HH-------------CCCCCCCEEEEEE-CCEEEeeecCCCCHHHHHHHHHH
Confidence 000 00 2566679999998 99999999999999888877754
No 214
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.05 E-value=1.7e-10 Score=96.96 Aligned_cols=87 Identities=14% Similarity=0.143 Sum_probs=68.1
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||.||++||++|+...|.+.++.++++++ +.++.|+.+. .. +.. ++
T Consensus 20 ~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~~----~l~-~~---------------- 70 (481)
T 3f8u_A 20 SAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI-VPLAKVDCTA-------NT----NTC-NK---------------- 70 (481)
T ss_dssp SSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CCEEEEETTT-------CH----HHH-HH----------------
T ss_pred CCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc-eEEEEEECCC-------CH----HHH-Hh----------------
Confidence 3489999999999999999999999999999876 8888888761 11 112 22
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|...|+++++ ++|+.+..|.|..+.+.+.+.+++
T Consensus 71 ------------------~~v~~~Ptl~~~-~~g~~~~~~~G~~~~~~l~~~~~~ 106 (481)
T 3f8u_A 71 ------------------YGVSGYPTLKIF-RDGEEAGAYDGPRTADGIVSHLKK 106 (481)
T ss_dssp ------------------TTCCEESEEEEE-ETTEEEEECCSCSSHHHHHHHHHH
T ss_pred ------------------cCCCCCCEEEEE-eCCceeeeecCccCHHHHHHHHHh
Confidence 145555987777 789888899999988888777654
No 215
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=99.02 E-value=2.1e-10 Score=83.64 Aligned_cols=133 Identities=9% Similarity=0.024 Sum_probs=76.7
Q ss_pred CCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCC-----------------------
Q 028944 55 RGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFA----------------------- 111 (201)
Q Consensus 55 ~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~----------------------- 111 (201)
++....+..-.++++|+.||..|||+|+...+.+.++.+++++ +.++.+.+.-.+
T Consensus 11 ~~~~~~~G~~~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~--v~~~~~~~p~~~~~s~~aa~~~~~a~~~~~~~~~~ 88 (175)
T 3gyk_A 11 DPNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN--VRLVYREWPILGEGSDFAARAALAARQQGKYEAFH 88 (175)
T ss_dssp CTTSCEEECTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT--EEEEEEECCCSCHHHHHHHHHHHHGGGGTCHHHHH
T ss_pred CCCCCCcCCCCCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC--EEEEEEeCCCCCCChHHHHHHHHHHHHHhHHHHHH
Confidence 3455667777889999999999999999999999999998765 555544432110
Q ss_pred -----CCCCCCHHHHHHHHHhhcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCC
Q 028944 112 -----GQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAP 186 (201)
Q Consensus 112 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g 186 (201)
.+..-+.+.+.+++++ .|++...+. ........... ...........+|.++|++++ +|+ .+.|
T Consensus 89 ~~lf~~~~~~~~~~l~~~a~~-~Gld~~~~~-~~~~~~~~~~~---v~~~~~~a~~~gv~gtPt~~i---~g~---~~~G 157 (175)
T 3gyk_A 89 WALMGMSGKANETGVLRIARE-VGLDTEQLQ-RDMEAPEVTAH---IAQSMALAQKLGFNGTPSFVV---EDA---LVPG 157 (175)
T ss_dssp HHHHTCSSCCSHHHHHHHHHH-TTCCHHHHH-HHTTCHHHHHH---HHHHHHHHHHHTCCSSSEEEE---TTE---EECS
T ss_pred HHHHhcCCCCCHHHHHHHHHH-cCCCHHHHH-HHHhChHHHHH---HHHHHHHHHHcCCccCCEEEE---CCE---EeeC
Confidence 0112345566666633 465543221 00000000000 000000001136788898655 565 4478
Q ss_pred CCCchhhhhcccCC
Q 028944 187 TTSPLKIEVGTTIP 200 (201)
Q Consensus 187 ~~~~~~l~~~l~~l 200 (201)
..+.+.+++.|+++
T Consensus 158 ~~~~~~l~~~i~~~ 171 (175)
T 3gyk_A 158 FVEQSQLQDAVDRA 171 (175)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 88888888877653
No 216
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.02 E-value=2.7e-10 Score=86.62 Aligned_cols=82 Identities=9% Similarity=-0.045 Sum_probs=60.9
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCCC
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKN 145 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 145 (201)
++++++.||++||++|+...|.++++..+++ ++.++.|+.+. .++ .. ++
T Consensus 136 ~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~~--~v~~~~vd~~~-------~~~----l~-~~----------------- 184 (229)
T 2ywm_A 136 IPIEIWVFVTTSCGYCPSAAVMAWDFALAND--YITSKVIDASE-------NQD----LA-EQ----------------- 184 (229)
T ss_dssp SCEEEEEEECTTCTTHHHHHHHHHHHHHHCT--TEEEEEEEGGG-------CHH----HH-HH-----------------
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHCC--CeEEEEEECCC-------CHH----HH-HH-----------------
Confidence 4566899999999999999999999999983 59999997651 111 11 11
Q ss_pred chhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 146 AAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++|..+|++++ +|+ +.++.|..+.+++.+.|++
T Consensus 185 -----------------~~v~~~Pt~~~---~G~-~~~~~G~~~~~~l~~~l~~ 217 (229)
T 2ywm_A 185 -----------------FQVVGVPKIVI---NKG-VAEFVGAQPENAFLGYIMA 217 (229)
T ss_dssp -----------------TTCCSSSEEEE---GGG-TEEEESCCCHHHHHHHHHH
T ss_pred -----------------cCCcccCEEEE---CCE-EEEeeCCCCHHHHHHHHHH
Confidence 14555599777 788 4568898888888777654
No 217
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.00 E-value=3.6e-10 Score=100.37 Aligned_cols=89 Identities=16% Similarity=0.101 Sum_probs=67.9
Q ss_pred CCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeecc
Q 028944 62 SGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDV 141 (201)
Q Consensus 62 ~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 141 (201)
.++.|++++|.||++||++|+.+.|.+.+++++++++ +.++.|+.+. ..+ .. +.|
T Consensus 451 ~~~~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~~~----~~-~~~------------ 505 (780)
T 3apo_A 451 PASDKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQ-LKVGTLDCTI-------HEG----LC-NMY------------ 505 (780)
T ss_dssp CTTCCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-CEEEEEETTT-------CHH----HH-HHT------------
T ss_pred HHcCCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-eEEEEEeCCC-------CHH----HH-HHc------------
Confidence 3447899999999999999999999999999999764 9999998762 221 11 221
Q ss_pred CCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 142 NGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+|...|+++++ ++|++ ..+.|..+.+.+.+.++.
T Consensus 506 ----------------------~v~~~Pt~~~~-~~g~~-~~~~g~~~~~~l~~fi~~ 539 (780)
T 3apo_A 506 ----------------------NIQAYPTTVVF-NQSSI-HEYEGHHSAEQILEFIED 539 (780)
T ss_dssp ----------------------TCCSSSEEEEE-ETTEE-EEECSCSCHHHHHHHHHH
T ss_pred ----------------------CCCcCCeEEEE-cCCce-eeecCcccHHHHHHHHHh
Confidence 34445999999 46877 678898888888777654
No 218
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.99 E-value=2.8e-10 Score=96.32 Aligned_cols=100 Identities=18% Similarity=0.054 Sum_probs=70.6
Q ss_pred EecCCCCeeecCCC-CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhc-C-CCeEEEEeecCCCCCCCCCCHHHHHHHHHh
Q 028944 51 VKDIRGNDVSLSGY-RGKVLLVVNVASKCGLTQSNYKELNVLYEKYK-N-QDFEVLAFPCNQFAGQEPGSNEEIQEVACT 127 (201)
Q Consensus 51 l~~~~G~~~~l~~~-~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~-~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~ 127 (201)
+...+|..+...-. .++++||.||++||++|+.+.|.+.++.++++ . .++.++.|..+ .
T Consensus 360 v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~~~~v~~~~vd~~------------------~ 421 (504)
T 2b5e_A 360 VFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHT------------------E 421 (504)
T ss_dssp EEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEGG------------------G
T ss_pred ceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhccCCcEEEEEecCC------------------c
Confidence 34445555532222 47899999999999999999999999999987 2 35777777543 1
Q ss_pred hcCcccceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcE--EEecCCCCCchhhhhcccC
Q 028944 128 MFKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKV--VERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 128 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i--~~~~~g~~~~~~l~~~l~~ 199 (201)
+ . . .. ++|..+|+++++ ++|+. +..|.|..+.+.+.+.|++
T Consensus 422 ~-~--------------~-~~--------------~~v~~~Pt~~~~-~~G~~~~~~~~~G~~~~~~l~~~i~~ 464 (504)
T 2b5e_A 422 N-D--------------V-RG--------------VVIEGYPTIVLY-PGGKKSESVVYQGSRSLDSLFDFIKE 464 (504)
T ss_dssp C-C--------------C-SS--------------CCCSSSSEEEEE-CCTTSCCCCBCCSCCCHHHHHHHHHH
T ss_pred c-c--------------c-cc--------------CCceecCeEEEE-eCCceecceEecCCCCHHHHHHHHHh
Confidence 1 0 0 00 145556998888 78876 6678898888888877654
No 219
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.99 E-value=4.5e-10 Score=93.67 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=39.1
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCC-C------eEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQ-D------FEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~------~~vv~vs~d 108 (201)
.++++||+||++||++|+.+.|.+.++.+++.++ + +.++.|+.|
T Consensus 41 ~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d 91 (470)
T 3qcp_A 41 PLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEHGKDALQIATAAAVNCA 91 (470)
T ss_dssp GGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSSCSSGGGGCEEEEEETT
T ss_pred CCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhcccccCceEEEEEEECC
Confidence 3489999999999999999999999999999743 2 899999876
No 220
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.91 E-value=2.6e-09 Score=76.48 Aligned_cols=89 Identities=10% Similarity=0.016 Sum_probs=59.2
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeecc
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDV 141 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 141 (201)
++|++||+|+++||..|+.+-... .++.+.+. +++.++-+..+ +. +-.++. ++|
T Consensus 41 ~~K~vlvd~~a~wC~~C~~me~~vf~d~~V~~~l~-~~fv~v~~d~~--------~~-~~~~l~-~~y------------ 97 (153)
T 2dlx_A 41 QNKWLMINIQNVQDFACQCLNRDVWSNEAVKNIIR-EHFIFWQVYHD--------SE-EGQRYI-QFY------------ 97 (153)
T ss_dssp HTCEEEEEEECSCTTTHHHHHHHTTTCHHHHHHHH-HTEEEEEEESS--------SH-HHHHHH-HHH------------
T ss_pred cCCeEEEEEECCCCHhHHHHHHHhcCCHHHHHHHH-cCeEEEEEecC--------CH-hHHHHH-HHc------------
Confidence 479999999999999999886543 23333332 24777777654 22 223344 222
Q ss_pred CCCCchhhHHHHHhhcCCcccccccccceEEEECCC-CcEEEecCCCCCchhhhhcccC
Q 028944 142 NGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKE-GKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~-G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
++...|+++++|++ |+.+....| .+++++.+.|++
T Consensus 98 ----------------------~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 98 ----------------------KLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp ----------------------TCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred ----------------------CCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 33334999999998 877767666 788887776654
No 221
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.89 E-value=3.5e-09 Score=78.50 Aligned_cols=43 Identities=14% Similarity=0.108 Sum_probs=38.8
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++++|+.||..|||+|+...+.+.++.+++++ ++.+..+.++
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~~~~ 66 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQ-DVVLKQVPIA 66 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCC-CeEEEEEecc
Confidence 478999999999999999999999999999987 5888888775
No 222
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.82 E-value=7.2e-10 Score=75.26 Aligned_cols=38 Identities=13% Similarity=0.182 Sum_probs=28.1
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
+++++++ ||++|||+|+...+.|.++.. .+.++.|..+
T Consensus 18 ~~~~vv~-f~a~~C~~C~~~~~~l~~~~~-----~~~~v~v~~~ 55 (116)
T 2e7p_A 18 SSAPVVV-FSKTYCGYCNRVKQLLTQVGA-----SYKVVELDEL 55 (116)
T ss_dssp TSSSEEE-EECTTCHHHHHHHHHHHHHTC-----CCEEEEGGGS
T ss_pred cCCCEEE-EECCCChhHHHHHHHHHHcCC-----CeEEEEccCC
Confidence 3456666 999999999999999888742 2566666544
No 223
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.81 E-value=2.6e-09 Score=79.00 Aligned_cols=43 Identities=19% Similarity=0.150 Sum_probs=37.9
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++++|+.||..|||+|+...+.+.++.+++.+ ++.+.-+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 66 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPA-DVHFVRLPAL 66 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCT-TEEEEEEECC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCC-CeEEEEEehh
Confidence 578999999999999999999999999999987 5777766654
No 224
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.79 E-value=7.9e-09 Score=91.80 Aligned_cols=88 Identities=9% Similarity=0.126 Sum_probs=65.4
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.++++||.||++||++|+...|.+.++.+++.+. +.++.|+.+. .. -+
T Consensus 132 ~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~~~-v~~~~vd~~~-------~~----------------~l-------- 179 (780)
T 3apo_A 132 SGELWFVNFYSPGSSHSHDLAPTWREFAKEVDGL-LRIGAVNCGD-------DR----------------ML-------- 179 (780)
T ss_dssp SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-SEEEEEETTT-------CS----------------SC--------
T ss_pred CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhcCc-eEEEEEeCCC-------cH----------------HH--------
Confidence 5689999999999999999999999999999765 9999998761 00 00
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
..+ ++|...|+++++ ++|+.+.+|.|..+.+.+.+.+++.
T Consensus 180 -~~~--------------~~v~~~Pt~~~~-~~g~~~~~~~G~~~~~~l~~~l~~~ 219 (780)
T 3apo_A 180 -CRM--------------KGVNSYPSLFIF-RSGMAAVKYNGDRSKESLVAFAMQH 219 (780)
T ss_dssp -C----------------------CEEEEE-CTTSCCEECCSCSCHHHHHHHHHTT
T ss_pred -HHH--------------cCCceeeeEEEE-eCCcEeeEecCCCCHHHHHHHHHHh
Confidence 011 255666997777 7899888999999888888877654
No 225
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.78 E-value=3.2e-08 Score=80.54 Aligned_cols=86 Identities=12% Similarity=0.057 Sum_probs=62.7
Q ss_pred CCcEEEEEEeecCCCCcHHhH------HHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeee
Q 028944 65 RGKVLLVVNVASKCGLTQSNY------KELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDK 138 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~------~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (201)
+++++||.|||+||++|...- |.++++.+.+++.++.+..|..+. .+ +.. ++|
T Consensus 29 ~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~~v~~~~Vd~~~-------~~----~l~-~~~--------- 87 (367)
T 3us3_A 29 KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDKGVGFGLVDSEK-------DA----AVA-KKL--------- 87 (367)
T ss_dssp HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEETTT-------TH----HHH-HHH---------
T ss_pred hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcCCceEEEEeCcc-------cH----HHH-HHc---------
Confidence 358999999999999974322 578888888887679999998761 11 122 221
Q ss_pred eccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhccc
Q 028944 139 IDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 139 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
+|...|+++++. +|+.+ .|.|..+.+.+.+.++
T Consensus 88 -------------------------~V~~~PTl~~f~-~G~~~-~y~G~~~~~~i~~~i~ 120 (367)
T 3us3_A 88 -------------------------GLTEEDSIYVFK-EDEVI-EYDGEFSADTLVEFLL 120 (367)
T ss_dssp -------------------------TCCSTTEEEEEE-TTEEE-ECCSCCSHHHHHHHHH
T ss_pred -------------------------CCCcCceEEEEE-CCcEE-EeCCCCCHHHHHHHHH
Confidence 455559988885 78875 7899998888877664
No 226
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.71 E-value=2.2e-08 Score=73.24 Aligned_cols=44 Identities=11% Similarity=0.104 Sum_probs=37.7
Q ss_pred CCcEEEEEEee-------cCCCCcHHhHHHHHHHHHHhcC----CCeEEEEeecC
Q 028944 65 RGKVLLVVNVA-------SKCGLTQSNYKELNVLYEKYKN----QDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~-------~~C~~C~~~~~~l~~~~~~~~~----~~~~vv~vs~d 108 (201)
++.++||.||| .||++|+...|.++++.++|.. ..+.+.-|.+|
T Consensus 36 ~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d 90 (178)
T 3ga4_A 36 PGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQAPQSLNLFFTVDVN 90 (178)
T ss_dssp TTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT
T ss_pred CCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhccCCCCEEEEEEECc
Confidence 45689999999 4999999999999999999971 23888888877
No 227
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.71 E-value=1.9e-08 Score=76.01 Aligned_cols=42 Identities=12% Similarity=0.133 Sum_probs=34.0
Q ss_pred CCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeec
Q 028944 62 SGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPC 107 (201)
Q Consensus 62 ~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~ 107 (201)
....++++|+.||++|||+|+++.+.+.++.+. ++.++.+..
T Consensus 82 g~~~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~~----~v~v~~~~~ 123 (216)
T 1eej_A 82 KAPQEKHVITVFTDITCGYCHKLHEQMADYNAL----GITVRYLAF 123 (216)
T ss_dssp CCTTCCEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEEC
T ss_pred cCCCCCEEEEEEECCCCHHHHHHHHHHHHHHhC----CcEEEEEEC
Confidence 334578999999999999999999999988652 577776654
No 228
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.70 E-value=2.6e-08 Score=69.41 Aligned_cols=86 Identities=8% Similarity=-0.054 Sum_probs=62.7
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.+.+++|.||++ |++|+...|.+.++.++|+++ +.++.|++|. .++ .+ ++|
T Consensus 22 ~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk-~~f~~vd~d~-------~~~----~a-~~~--------------- 72 (133)
T 2djk_A 22 AGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV-INFGTIDAKA-------FGA----HA-GNL--------------- 72 (133)
T ss_dssp TTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-SEEEEECTTT-------TGG----GT-TTT---------------
T ss_pred CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-EEEEEEchHH-------hHH----HH-HHc---------------
Confidence 357899999999 899999999999999999876 8899987662 111 11 111
Q ss_pred CchhhHHHHHhhcCCcccccccc--cceEEEECC-CCcEEEecC--CCCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKW--NFTKFLVNK-EGKVVERYA--PTTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~--~P~~~lid~-~G~i~~~~~--g~~~~~~l~~~l~~ 199 (201)
++.. +|++++++. +|+. +... |..+.+.+++.++.
T Consensus 73 -------------------gi~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~ 112 (133)
T 2djk_A 73 -------------------NLKTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDD 112 (133)
T ss_dssp -------------------TCCSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHH
T ss_pred -------------------CCCcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHH
Confidence 3333 499888874 5776 4554 88888888877654
No 229
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.67 E-value=6.7e-08 Score=74.20 Aligned_cols=132 Identities=9% Similarity=0.084 Sum_probs=70.4
Q ss_pred cCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhh--------cCcc
Q 028944 61 LSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTM--------FKAE 132 (201)
Q Consensus 61 l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~--------~~~~ 132 (201)
+..-.++++|+.|+..|||+|++..+.+.++.++ + ++.+..+.+.. .+ +++....+...... +...
T Consensus 92 ~G~~~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~~--g-~v~v~~~~~p~-~~--~~s~~~a~a~~~a~d~~~~~~~~~~~ 165 (241)
T 1v58_A 92 DGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDS--G-KVQLRTLLVGV-IK--PESPATAAAILASKDPAKTWQQYEAS 165 (241)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHT--T-SEEEEEEECCC-SS--TTHHHHHHHHHHSSSHHHHHHHHHHT
T ss_pred ECCCCCCeEEEEEECCCChhHHHHHHHHHHHHhC--C-cEEEEEEECCc-CC--CcHHHHHHHHHHccCHHHHHHHHHHH
Confidence 3334568999999999999999999999987765 2 47666555421 11 22333322221110 0111
Q ss_pred cceeeeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 133 FPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 133 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
|..- ..+.........-........-....+|..+|++++.|.+|++ ....|..+.+++.+.|++.
T Consensus 166 ~~~~-~l~~~~~~~~~~~~~v~~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L~~~l~~~ 231 (241)
T 1v58_A 166 GGKL-KLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLPDQKTLNIIMGNK 231 (241)
T ss_dssp TTCC-CCCCCSSCCHHHHHHHHHHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSCCHHHHHHHTTC-
T ss_pred hccC-CCCccccCCHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCCCHHHHHHHHHHH
Confidence 1100 0000000000100000000000011378888999999888976 4567888888999888765
No 230
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=98.67 E-value=2.8e-08 Score=64.18 Aligned_cols=74 Identities=7% Similarity=0.052 Sum_probs=49.4
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCCCchh
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKNAAP 148 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 148 (201)
.|+.||++||++|+...+.|.++..++ +.-|++| ++++ .. ++|+
T Consensus 2 ~vv~f~a~~C~~C~~~~~~L~~~~~~~------~~~vdid-------~~~~----l~-~~~g------------------ 45 (87)
T 1ttz_A 2 ALTLYQRDDCHLCDQAVEALAQARAGA------FFSVFID-------DDAA----LE-SAYG------------------ 45 (87)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHTTCCC------EEEEECT-------TCHH----HH-HHHT------------------
T ss_pred EEEEEECCCCchHHHHHHHHHHHHHhh------eEEEECC-------CCHH----HH-HHhC------------------
Confidence 378899999999999999998764332 3456555 2333 11 2222
Q ss_pred hHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 149 IYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 149 ~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+. +|++++ .+|+.+. |..+.+++++.|++.
T Consensus 46 ----------------~~-vPtl~~--~~G~~v~---g~~~~~~L~~~l~~~ 75 (87)
T 1ttz_A 46 ----------------LR-VPVLRD--PMGRELD---WPFDAPRLRAWLDAA 75 (87)
T ss_dssp ----------------TT-CSEEEC--TTCCEEE---SCCCHHHHHHHHHTC
T ss_pred ----------------CC-cCeEEE--ECCEEEe---CCCCHHHHHHHHHHH
Confidence 22 387665 6799874 777888888887664
No 231
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=98.67 E-value=1.8e-08 Score=74.50 Aligned_cols=43 Identities=14% Similarity=-0.040 Sum_probs=37.4
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++++|+.||..|||+|....+.|.++.++++. .+.+..+.+.
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~~ 63 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPS-DAYLRTEHVV 63 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHSCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHCCC-ceEEEEeccc
Confidence 468999999999999999999999999999976 4777777653
No 232
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.58 E-value=9.1e-08 Score=72.21 Aligned_cols=44 Identities=16% Similarity=0.144 Sum_probs=36.3
Q ss_pred CCCCcEEEEEEeec-CCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 63 GYRGKVLLVVNVAS-KCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 63 ~~~gk~~lv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
..+++++++.||++ ||++|+...|.+.++.+. .+ ++.++.|+.+
T Consensus 19 ~~~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~-~~-~v~~~~vd~~ 63 (226)
T 1a8l_A 19 KMVNPVKLIVFVRKDHCQYCDQLKQLVQELSEL-TD-KLSYEIVDFD 63 (226)
T ss_dssp GCCSCEEEEEEECSSSCTTHHHHHHHHHHHHTT-CT-TEEEEEEETT
T ss_pred hcCCCeEEEEEecCCCCchhHHHHHHHHHHHhh-CC-ceEEEEEeCC
Confidence 34567889999999 999999999999998754 33 5899888765
No 233
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.55 E-value=3e-07 Score=78.17 Aligned_cols=82 Identities=12% Similarity=0.051 Sum_probs=60.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGK 144 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 144 (201)
.+++.++.||++|||+|+...|.++++..+++ ++.+..|..+. .++ .. ++
T Consensus 116 ~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~~--~v~~~~vd~~~-------~~~----~~-~~---------------- 165 (521)
T 1hyu_A 116 DGDFEFETYYSLSCHNCPDVVQALNLMAVLNP--RIKHTAIDGGT-------FQN----EI-TE---------------- 165 (521)
T ss_dssp CSCEEEEEEECTTCSSHHHHHHHHHHHHHHCT--TEEEEEEETTT-------CHH----HH-HH----------------
T ss_pred CCCcceEEEECCCCcCcHHHHHHHHHHHhHcC--ceEEEEEechh-------hHH----HH-HH----------------
Confidence 35688999999999999999999999998876 58888887652 121 22 22
Q ss_pred CchhhHHHHHhhcCCcccccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 145 NAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+++..+|++++ +|+.+.. |..+.+++.+.++.
T Consensus 166 ------------------~~i~svPt~~i---~g~~~~~--G~~~~~~l~~~l~~ 197 (521)
T 1hyu_A 166 ------------------RNVMGVPAVFV---NGKEFGQ--GRMTLTEIVAKVDT 197 (521)
T ss_dssp ------------------TTCCSSSEEEE---TTEEEEE--SCCCHHHHHHHHCC
T ss_pred ------------------hCCCccCEEEE---CCEEEec--CCCCHHHHHHHHhh
Confidence 14445599766 7888765 77777777777654
No 234
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=98.52 E-value=1.1e-06 Score=63.73 Aligned_cols=50 Identities=10% Similarity=0.185 Sum_probs=40.7
Q ss_pred eeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHh--cCCCeEEEEeecC
Q 028944 58 DVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKY--KNQDFEVLAFPCN 108 (201)
Q Consensus 58 ~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~--~~~~~~vv~vs~d 108 (201)
.+.+..-.++++|+.|+..+||+|+...+.+.++.++| .+ +++++.....
T Consensus 19 ~~~~G~~~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 70 (175)
T 1z6m_A 19 GLHIGESNAPVKMIEFINVRCPYCRKWFEESEELLAQSVKSG-KVERIIKLFD 70 (175)
T ss_dssp SEEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTT-SEEEEEEECC
T ss_pred CcccCCCCCCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCC-cEEEEEEeCC
Confidence 34556667899999999999999999999999999998 43 3777776654
No 235
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=98.51 E-value=1e-07 Score=70.23 Aligned_cols=42 Identities=17% Similarity=0.191 Sum_probs=36.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeec
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPC 107 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~ 107 (201)
.++++|+.||..+||+|....+.+.++.+++.. ++.+..+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-~v~~~~~p~ 65 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQAK-DVRFTLVPA 65 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTSCT-TEEEEEEEC
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhcCC-ceEEEEeCc
Confidence 578899999999999999999999999999875 477766665
No 236
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.44 E-value=4.6e-07 Score=60.66 Aligned_cols=38 Identities=29% Similarity=0.289 Sum_probs=32.3
Q ss_pred EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 68 VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 68 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
..|+.||++|||+|+...+.|.++.+++. +.+.-|++|
T Consensus 30 ~~vv~y~~~~C~~C~~a~~~L~~l~~e~~---i~~~~vDId 67 (107)
T 2fgx_A 30 RKLVVYGREGCHLCEEMIASLRVLQKKSW---FELEVINID 67 (107)
T ss_dssp CCEEEEECSSCHHHHHHHHHHHHHHHHSC---CCCEEEETT
T ss_pred cEEEEEeCCCChhHHHHHHHHHHHHHhcC---CeEEEEECC
Confidence 67899999999999999999999988864 666666665
No 237
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.43 E-value=4.5e-07 Score=68.15 Aligned_cols=38 Identities=13% Similarity=0.136 Sum_probs=30.6
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEee
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFP 106 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs 106 (201)
.++++|+.||.+|||+|++..+.+.++.+. ++.+..+.
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~~----~v~v~~~~ 122 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYNDL----GITVRYLA 122 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHHT----TEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHhC----CcEEEEEE
Confidence 458999999999999999999999986542 46665543
No 238
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=98.42 E-value=2.1e-07 Score=70.46 Aligned_cols=45 Identities=9% Similarity=0.099 Sum_probs=34.4
Q ss_pred CCCcEEEEEE----eecCCCCcHHhHHHHHHHHHHhcC-CCeEEEEeecC
Q 028944 64 YRGKVLLVVN----VASKCGLTQSNYKELNVLYEKYKN-QDFEVLAFPCN 108 (201)
Q Consensus 64 ~~gk~~lv~f----~~~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~vs~d 108 (201)
.++.++|+.| |++||++|+..+|.+.++++++.+ ..+.+..|..+
T Consensus 19 ~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~~~~~~v~~~~vd~~ 68 (229)
T 2ywm_A 19 FKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEAVGQDKIKLDIYSPF 68 (229)
T ss_dssp CCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHHHCTTTEEEEEECTT
T ss_pred ccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCc
Confidence 3445566666 589999999999999999888842 24888888655
No 239
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.41 E-value=3.3e-07 Score=57.83 Aligned_cols=37 Identities=8% Similarity=0.049 Sum_probs=27.3
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++.||++|||+|+...+.++++.+++ ++.+..+.+|
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~---~~~~~~~~v~ 39 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPS---KYTVEIVHLG 39 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTT---TEEEEEEETT
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhc---CCeEEEEEec
Confidence 367889999999999999999886554 3444444443
No 240
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.34 E-value=2.3e-07 Score=59.02 Aligned_cols=38 Identities=16% Similarity=0.079 Sum_probs=31.8
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++.|+++|||+|+...+.|.++..++. ++.+..++++
T Consensus 2 ~v~~f~~~~C~~C~~~~~~l~~l~~~~~--~i~~~~vdi~ 39 (85)
T 1ego_A 2 QTVIFGRSGCPYCVRAKDLAEKLSNERD--DFQYQYVDIR 39 (85)
T ss_dssp EEEEECCTTSTHHHHHHHHHHHHHHHHS--SCEEEEECHH
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHHhcCC--CceEEEEecc
Confidence 3678999999999999999999988865 4788777654
No 241
>4h86_A Peroxiredoxin type-2; oxidoreductase; 2.00A {Saccharomyces cerevisiae} PDB: 4dsq_A 4dsr_A 4dss_A
Probab=98.34 E-value=1.1e-06 Score=64.77 Aligned_cols=138 Identities=12% Similarity=0.036 Sum_probs=85.2
Q ss_pred CcccccccccccCCCcccc--eE--EecCC---------C--CeeecCCC--CCcEEEEEE-eecCCCCcHH-hHHHHHH
Q 028944 30 SSFSAKNMATQEAPKSIYD--FT--VKDIR---------G--NDVSLSGY--RGKVLLVVN-VASKCGLTQS-NYKELNV 90 (201)
Q Consensus 30 ~~~~~~~~~~~~~~~~~p~--f~--l~~~~---------G--~~~~l~~~--~gk~~lv~f-~~~~C~~C~~-~~~~l~~ 90 (201)
.......++.. +++++|. ++ -...+ | .++++++. +||.+||++ -..+-|.|.. ++|.+.+
T Consensus 17 r~~~~~~~~~~-v~~~~P~gdv~f~yip~~~~~~~~~~c~~P~~v~ls~~~~k~KkVVLf~vPGAFTPtCS~~hlPgf~~ 95 (199)
T 4h86_A 17 RGSHMASMSDL-VNKKFPAGDYKFQYIAISQSDADSESCKMPQTVEWSKLISENKKVIITGAPAAFSPTCTVSHIPGYIN 95 (199)
T ss_dssp TTCCCCCBCTT-TTSBCCCTTCEEEECCCCSSSTTSGGGTSCEEEEHHHHHHHCSEEEEEECSCTTCHHHHHTTHHHHHH
T ss_pred ccchhhhhHHH-hCCCCCCCCceEEEecCCccccccccCCCCeeeEHHHHhcCCCeEEEEEeCCCcCCcCChhhChHHHH
Confidence 33444555566 8999995 33 23221 2 24666664 687665554 4677888975 7999988
Q ss_pred HHHHh-cCCCe-EEEEeecCCCCCCCCCCHHHHHHHHHhhcCcc----cceeeeeccCCCCchhhHHHHHhhcCCccccc
Q 028944 91 LYEKY-KNQDF-EVLAFPCNQFAGQEPGSNEEIQEVACTMFKAE----FPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDA 164 (201)
Q Consensus 91 ~~~~~-~~~~~-~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 164 (201)
.++++ +.+|+ +|++||+| ++-.+++|.+. .+.. ++.+ .|.++.-++. ++.... . .+.+
T Consensus 96 ~~d~~~k~kGvd~I~ciSVN--------D~FVm~AW~k~-~~~~~~~~i~~l--aD~~~eftka-lGl~~~--~--~~gg 159 (199)
T 4h86_A 96 YLDELVKEKEVDQVIVVTVD--------NPFANQAWAKS-LGVKDTTHIKFA--SDPGCAFTKS-IGFELA--V--GDGV 159 (199)
T ss_dssp HHHHHHHHSCCCEEEEEESS--------CHHHHHHHHHH-TTCCCCSSEEEE--ECGGGHHHHH-TTCEEE--E--ETTE
T ss_pred HHHHHHHhcCCcEEEEEEcC--------CHHHHHHHHHH-hccccccccccc--CCcchHHHHh-cCceee--c--CCCc
Confidence 88775 66777 69999988 78999999965 3543 5555 4444433322 211111 0 0112
Q ss_pred ccccceEEEECCCCcEEEecC
Q 028944 165 IKWNFTKFLVNKEGKVVERYA 185 (201)
Q Consensus 165 i~~~P~~~lid~~G~i~~~~~ 185 (201)
.....+.+||| ||+|.+.+.
T Consensus 160 ~RS~Rya~IVd-DGvV~~~~v 179 (199)
T 4h86_A 160 YWSGRWAMVVE-NGIVTYAAK 179 (199)
T ss_dssp EEECSEEEEEE-TTEEEEEEE
T ss_pred ceeeEEEEEEE-CCEEEEEEE
Confidence 34446678898 999988754
No 242
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.31 E-value=3.7e-07 Score=60.35 Aligned_cols=38 Identities=13% Similarity=0.154 Sum_probs=29.9
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++.|+.|+++|||+|+...+.|.++. +++.+.-|++|
T Consensus 15 ~~~~v~~f~~~~C~~C~~~~~~L~~l~-----~~i~~~~vdi~ 52 (100)
T 1wjk_A 15 ALPVLTLFTKAPCPLCDEAKEVLQPYK-----DRFILQEVDIT 52 (100)
T ss_dssp CCCEEEEEECSSCHHHHHHHHHTSTTS-----SSSEEEEEETT
T ss_pred CCCEEEEEeCCCCcchHHHHHHHHHhh-----hCCeEEEEECC
Confidence 457889999999999999888887653 23777777765
No 243
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.25 E-value=1.9e-06 Score=54.21 Aligned_cols=32 Identities=6% Similarity=0.239 Sum_probs=24.5
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
++.|+++|||+|+...+.|.+. ++.+..++++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~-------~i~~~~vdi~ 34 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR-------GFDFEMINVD 34 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEcCCCChhHHHHHHHHHHC-------CCCeEEEECC
Confidence 6779999999999988887763 4555666655
No 244
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.22 E-value=2.3e-07 Score=72.94 Aligned_cols=38 Identities=13% Similarity=0.095 Sum_probs=28.7
Q ss_pred eeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHh
Q 028944 58 DVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKY 95 (201)
Q Consensus 58 ~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~ 95 (201)
.+.+++..++..++.||++|||+|++..|.++++.+++
T Consensus 189 ~~~la~~l~~~~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 189 AVGLAAHLRQIGGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp HHHHHHHHHHTTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred HHHHHHHhCCCCEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 34444443345579999999999999999999987554
No 245
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=98.21 E-value=2e-06 Score=65.87 Aligned_cols=89 Identities=15% Similarity=0.126 Sum_probs=60.9
Q ss_pred CCcEEEEEEee--cCCCCcHHhHHHHHHHHHHhcC-CCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeecc
Q 028944 65 RGKVLLVVNVA--SKCGLTQSNYKELNVLYEKYKN-QDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDV 141 (201)
Q Consensus 65 ~gk~~lv~f~~--~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 141 (201)
.++++||.||+ +||+ ..|.+.++.+++.+ .++.|..|++|+.+ .... .+.. ++|
T Consensus 21 ~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~~~v~~akVDvd~~g--~~~~----~~l~-~~~------------ 77 (240)
T 2qc7_A 21 KSKFVLVKFDTQYPYGE----KQDEFKRLAENSASSDDLLVAEVGISDYG--DKLN----MELS-EKY------------ 77 (240)
T ss_dssp GCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTCTTEEEEEECCCCSS--SCCS----HHHH-HHT------------
T ss_pred CCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCCCCeEEEEEeCCccc--chhh----HHHH-HHc------------
Confidence 35799999999 9998 89999999999974 36999999866200 0001 1122 222
Q ss_pred CCCCchhhHHHHHhhcCCccccccc--ccceEEEECCCCc--EEEecCCCCCchhhhhcccC
Q 028944 142 NGKNAAPIYKFLKSEKGGFLGDAIK--WNFTKFLVNKEGK--VVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~i~--~~P~~~lid~~G~--i~~~~~g~~~~~~l~~~l~~ 199 (201)
+|. .+|+++++ ++|+ ....|.|..+.+.+.+.|++
T Consensus 78 ----------------------~V~~~~~PTl~~f-~~G~~~~~~~y~G~~~~~~L~~fi~~ 116 (240)
T 2qc7_A 78 ----------------------KLDKESYPVFYLF-RDGDFENPVPYTGAVKVGAIQRWLKG 116 (240)
T ss_dssp ----------------------TCCGGGCSEEEEE-ETTCSSCCEECCSCSCHHHHHHHHHH
T ss_pred ----------------------CCCCCCCCEEEEE-eCCCcCcceeecCCCCHHHHHHHHHH
Confidence 444 45887777 5676 35578888888888877754
No 246
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.11 E-value=4.3e-06 Score=64.28 Aligned_cols=40 Identities=8% Similarity=0.003 Sum_probs=34.4
Q ss_pred CCcEEEEEEe--ecCCCCcHHhHHHHHHHHHHhcC--CCeEEEEeecC
Q 028944 65 RGKVLLVVNV--ASKCGLTQSNYKELNVLYEKYKN--QDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~--~~~C~~C~~~~~~l~~~~~~~~~--~~~~vv~vs~d 108 (201)
.++++||.|| ++||+ ..|.+.++.+++.+ .++.|..|++|
T Consensus 32 ~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~~~v~~akVD~d 75 (248)
T 2c0g_A 32 RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKATKDLLIATVGVK 75 (248)
T ss_dssp TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHCSSEEEEEEEEC
T ss_pred cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccCCCeEEEEEECC
Confidence 4579999999 99998 89999999999864 36999999876
No 247
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=98.11 E-value=2.5e-06 Score=61.98 Aligned_cols=42 Identities=5% Similarity=-0.067 Sum_probs=34.6
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeec
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPC 107 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~ 107 (201)
.++++||.|+.-.||+|+...+.+.++.+++.+. +.++-+..
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~-~~~~~~~~ 61 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEG-AKFQKNHV 61 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTT-CEEEEEEC
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCc-eEEEEEec
Confidence 4688999999999999999999999999999865 45544443
No 248
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=98.09 E-value=4.5e-07 Score=66.75 Aligned_cols=40 Identities=15% Similarity=0.156 Sum_probs=33.6
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
++++||.||.-|||+|+...|.+.++.+++ + +.+.-+.+.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~-~--v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA-G--TDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH-T--SCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh-C--CeEEEEecc
Confidence 689999999999999999999999999998 3 555555543
No 249
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=98.05 E-value=1.4e-06 Score=64.18 Aligned_cols=43 Identities=5% Similarity=0.026 Sum_probs=35.1
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d 108 (201)
.++++||.||+.|||+|+...|.+ .++.+++.+ ++.++-+.++
T Consensus 13 ~~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~ 58 (189)
T 3l9v_A 13 VDAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQ-GSRMVKYHVS 58 (189)
T ss_dssp TTCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCT-TCCEEEEECS
T ss_pred CCCCEEEEEECCCChhHHHHhHhccchHHHHHhCCC-CCEEEEEech
Confidence 457899999999999999999986 678777775 4777777665
No 250
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=97.95 E-value=1e-05 Score=49.80 Aligned_cols=32 Identities=9% Similarity=0.131 Sum_probs=24.0
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
++.|+++|||+|++..+.|.++ |+.+..+.++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~-------~i~~~~~di~ 34 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA-------GLAYNTVDIS 34 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-------TCCCEEEETT
T ss_pred EEEEeCCCChHHHHHHHHHHHc-------CCCcEEEECC
Confidence 5678999999999988888764 3555555554
No 251
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=97.91 E-value=1.3e-05 Score=64.64 Aligned_cols=41 Identities=7% Similarity=0.158 Sum_probs=36.4
Q ss_pred cEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 67 KVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 67 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
+++++.|+++||++|+...+.+.++.++++++ +.++.|..+
T Consensus 136 ~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~-i~f~~vd~~ 176 (361)
T 3uem_A 136 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFIFIDSD 176 (361)
T ss_dssp CEEEEEECCSSSSSHHHHHHHHHHHHGGGTTT-CEEEEECTT
T ss_pred CcEEEEEEeCCchhHHHHHHHHHHHHHHccCc-eEEEEecCC
Confidence 57789999999999999999999999999876 888888654
No 252
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.88 E-value=1.9e-06 Score=64.06 Aligned_cols=53 Identities=13% Similarity=0.149 Sum_probs=41.5
Q ss_pred CCCeee-cCC-CCCcEEEEEEeecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecC
Q 028944 55 RGNDVS-LSG-YRGKVLLVVNVASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 55 ~G~~~~-l~~-~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d 108 (201)
.|+.+. +.. ..++++||.||+.|||+|+...|.+ .++.+++++ ++.+.-+.++
T Consensus 100 ~g~~y~~l~~p~~~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~-~v~~~~~~v~ 157 (197)
T 1un2_A 100 DGKQYTTLEKPVAGAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPE-GVKMTKYHVN 157 (197)
T ss_dssp BTTTEEECSSCCTTCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCT-TCCEEEEECS
T ss_pred CCCCceEccCCCCCCCEEEEEECCCChhHHHhCcccccHHHHHHHCCC-CCEEEEeccC
Confidence 455442 332 3468999999999999999999998 999999875 4778777776
No 253
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.85 E-value=1.8e-05 Score=52.23 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=26.1
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEee
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFP 106 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs 106 (201)
.++.|+++|||+|+...+.|.++..+++ ++.++-|.
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~~~~~~--~~~~vdi~ 48 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQLPFKEG--LLEFVDIT 48 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHSCBCTT--SEEEEEGG
T ss_pred CEEEEEcCCCHhHHHHHHHHHHcCCCCC--ccEEEEcc
Confidence 3667899999999999998887644432 26666554
No 254
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.83 E-value=1.4e-05 Score=58.98 Aligned_cols=43 Identities=16% Similarity=0.081 Sum_probs=38.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++++|+.||..|||+|+...+.+.++.+++.+ ++.+.-+.++
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~-~v~~~~~p~~ 65 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKD-DMYLRTEHVV 65 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCT-TEEEEEEECC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCC-CeEEEEecCC
Confidence 478999999999999999999999999999987 4888888775
No 255
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.75 E-value=7.5e-05 Score=52.72 Aligned_cols=37 Identities=22% Similarity=0.332 Sum_probs=28.7
Q ss_pred CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEee
Q 028944 64 YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFP 106 (201)
Q Consensus 64 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs 106 (201)
-.++++|+.|...+||+|++..+.+.++ . ++.++.+.
T Consensus 12 ~~a~~~vv~f~D~~Cp~C~~~~~~l~~l----~--~v~v~~~~ 48 (147)
T 3gv1_A 12 GNGKLKVAVFSDPDCPFCKRLEHEFEKM----T--DVTVYSFM 48 (147)
T ss_dssp TTCCEEEEEEECTTCHHHHHHHHHHTTC----C--SEEEEEEE
T ss_pred CCCCEEEEEEECCCChhHHHHHHHHhhc----C--ceEEEEEE
Confidence 3568999999999999999999988654 2 35555543
No 256
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.73 E-value=3.2e-05 Score=59.22 Aligned_cols=43 Identities=12% Similarity=0.163 Sum_probs=34.4
Q ss_pred CcEEEEEEeecC--CCCcHHhHHHHHHHHHHhcC-CC---eEEEEeecC
Q 028944 66 GKVLLVVNVASK--CGLTQSNYKELNVLYEKYKN-QD---FEVLAFPCN 108 (201)
Q Consensus 66 gk~~lv~f~~~~--C~~C~~~~~~l~~~~~~~~~-~~---~~vv~vs~d 108 (201)
+++++|.||+.| |++|+...+.+.++.+.+.. +| +.++.+..|
T Consensus 25 ~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d 73 (243)
T 2hls_A 25 VNPVEVHVFLSKSGCETCEDTLRLMKLFEEESPTRNGGKLLKLNVYYRE 73 (243)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHHHSCEETTEESEEEEEEETT
T ss_pred CCCEEEEEEeCCCCCCchHHHHHHHHHHHHhccCCCCCceeEEEEecCC
Confidence 468999999999 99999999999999988532 22 777777654
No 257
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.69 E-value=1.8e-05 Score=58.42 Aligned_cols=43 Identities=9% Similarity=0.075 Sum_probs=35.4
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d 108 (201)
.++++|+.|+.-+||+|+...+.+ .++.+++.++ +.++-+..+
T Consensus 20 ~~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~-v~~~~~~~~ 65 (191)
T 3l9s_A 20 AGEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEG-TKMTKYHVE 65 (191)
T ss_dssp CSSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTT-CCEEEEECS
T ss_pred CCCCeEEEEECCCChhHHHhChhccchHHHHHhCCCC-cEEEEEecc
Confidence 458999999999999999999987 6899999764 666666554
No 258
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.66 E-value=2.9e-05 Score=56.93 Aligned_cols=43 Identities=16% Similarity=0.182 Sum_probs=36.1
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHH-HHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKEL-NVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l-~~~~~~~~~~~~~vv~vs~d 108 (201)
.+++++|.||...||+|....+.+ .++.+++..+ +.+..+.++
T Consensus 16 ~~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~-v~~~~~~l~ 59 (195)
T 3c7m_A 16 NADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDI-VAFTPFHLE 59 (195)
T ss_dssp SCTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTT-CEEEEEECT
T ss_pred CCCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCc-eEEEEEecC
Confidence 457788999999999999999999 9999988754 777777665
No 259
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.55 E-value=0.00026 Score=48.75 Aligned_cols=22 Identities=14% Similarity=0.252 Sum_probs=18.4
Q ss_pred EEEEeecCCCCcHHhHHHHHHH
Q 028944 70 LVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
++.|+++|||+|+...+.|.++
T Consensus 29 vvvf~~~~Cp~C~~~~~~L~~~ 50 (130)
T 2cq9_A 29 VVIFSKTSCSYCTMAKKLFHDM 50 (130)
T ss_dssp EEEEECSSCSHHHHHHHHHHHH
T ss_pred EEEEEcCCChHHHHHHHHHHHc
Confidence 3348999999999999888875
No 260
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.49 E-value=0.00039 Score=44.96 Aligned_cols=33 Identities=15% Similarity=0.151 Sum_probs=22.9
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.|+.|..+|||+|.+.-..|.+ +|+.+.-+.++
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~-------~gi~y~~idi~ 37 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTA-------NRIAYDEVDIE 37 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHH-------TTCCCEEEETT
T ss_pred cEEEEcCCCCHhHHHHHHHHHh-------cCCceEEEEcC
Confidence 3667888999999987666654 34555555555
No 261
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.46 E-value=7e-05 Score=50.33 Aligned_cols=25 Identities=16% Similarity=0.254 Sum_probs=19.8
Q ss_pred cEEEEEEeecCCCCcHHhHHHHHHH
Q 028944 67 KVLLVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 67 k~~lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
+..|+.|+++|||+|+...+.|.++
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~ 42 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKF 42 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTS
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHc
Confidence 3457779999999999888877654
No 262
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.46 E-value=0.00011 Score=48.31 Aligned_cols=24 Identities=21% Similarity=0.148 Sum_probs=20.2
Q ss_pred EEEEEEeecCCCCcHHhHHHHHHH
Q 028944 68 VLLVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 68 ~~lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
..++.|+++|||+|++..+.|.+.
T Consensus 22 ~~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 22 GKVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp SCEEEEECSSCHHHHHHHHHHHHH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHc
Confidence 446679999999999999888875
No 263
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.41 E-value=0.00029 Score=47.10 Aligned_cols=22 Identities=14% Similarity=0.197 Sum_probs=18.6
Q ss_pred EEEEeecCCCCcHHhHHHHHHH
Q 028944 70 LVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
|+.|+.+|||+|++..+.|.++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 6669999999999888888764
No 264
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.38 E-value=0.00019 Score=54.26 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=38.3
Q ss_pred eecCCCCCcEEEEEEeecCCCCcHHhHHHH-HHHHHHhcCC-CeEEEEeecC
Q 028944 59 VSLSGYRGKVLLVVNVASKCGLTQSNYKEL-NVLYEKYKNQ-DFEVLAFPCN 108 (201)
Q Consensus 59 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l-~~~~~~~~~~-~~~vv~vs~d 108 (201)
..+..-.++++|+.|+.-.||+|+...+.+ .++.++|.+. .++++.....
T Consensus 32 ~~~G~~~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 32 KLLGDPKAPILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp CEESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred CccCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 445555678999999999999999999864 7888888543 4777766553
No 265
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.36 E-value=0.0005 Score=43.93 Aligned_cols=33 Identities=21% Similarity=0.185 Sum_probs=23.7
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEee
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFP 106 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs 106 (201)
.++.|+++|||+|++....|.++. ..+..+-|.
T Consensus 13 ~v~ly~~~~Cp~C~~~~~~L~~~g-----i~~~~~~v~ 45 (92)
T 3ic4_A 13 EVLMYGLSTCPHCKRTLEFLKREG-----VDFEVIWID 45 (92)
T ss_dssp SSEEEECTTCHHHHHHHHHHHHHT-----CCCEEEEGG
T ss_pred eEEEEECCCChHHHHHHHHHHHcC-----CCcEEEEee
Confidence 366788999999999888887752 235555554
No 266
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.34 E-value=0.00059 Score=47.99 Aligned_cols=22 Identities=14% Similarity=0.252 Sum_probs=18.5
Q ss_pred EEEEeecCCCCcHHhHHHHHHH
Q 028944 70 LVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
++.|+++|||+|+...+.|.++
T Consensus 51 Vvvf~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 51 VVIFSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp EEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 3449999999999999888876
No 267
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.33 E-value=0.0004 Score=46.96 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=21.8
Q ss_pred EEEEeecCCCCcHHh-HHHHHHHHHHhcCCCeEEEEeecC
Q 028944 70 LVVNVASKCGLTQSN-YKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 70 lv~f~~~~C~~C~~~-~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
|+.|+++|||+|++. .+.|.+. ....+.+..+.+|
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~----~~~~i~~~~vdid 62 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKL----KVPRSKVLVLQLN 62 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTS----CCCGGGEEEEEGG
T ss_pred EEEEEcCCCcCHHHHHHHHHHHc----CCCCCCeEEEECc
Confidence 566999999999987 5544432 2111555555554
No 268
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=97.32 E-value=0.001 Score=48.28 Aligned_cols=43 Identities=23% Similarity=0.264 Sum_probs=33.5
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHH-HHHHHHhcCC-CeEEEEeec
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKEL-NVLYEKYKNQ-DFEVLAFPC 107 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l-~~~~~~~~~~-~~~vv~vs~ 107 (201)
.++++|+.|+...||.|....+.+ .++.++|.+. ++.++....
T Consensus 10 ~a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~ 54 (186)
T 3bci_A 10 NGKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNL 54 (186)
T ss_dssp -CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEC
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEec
Confidence 457899999999999999999998 5677888653 366666554
No 269
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.28 E-value=0.00037 Score=51.72 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=36.9
Q ss_pred cCCCCCcEEEEEEeecCCCCcHHhHHHH-HHHHHHhcCC-CeEEEEeecC
Q 028944 61 LSGYRGKVLLVVNVASKCGLTQSNYKEL-NVLYEKYKNQ-DFEVLAFPCN 108 (201)
Q Consensus 61 l~~~~gk~~lv~f~~~~C~~C~~~~~~l-~~~~~~~~~~-~~~vv~vs~d 108 (201)
+..-.++++|+.|+.-.||+|+...+.+ ..+.++|.+. ++.++-..+.
T Consensus 24 ~G~~~a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~p 73 (202)
T 3gha_A 24 LGKDDAPVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNVM 73 (202)
T ss_dssp ESCTTCSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEECC
T ss_pred ecCCCCCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEecC
Confidence 4445678999999999999999998887 5666778643 4777776654
No 270
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.27 E-value=0.0011 Score=48.15 Aligned_cols=104 Identities=11% Similarity=0.082 Sum_probs=63.0
Q ss_pred CCCCcEEEEEEeecCCCCcHHhHHHH---HHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHH---HHHHhhcCccccee
Q 028944 63 GYRGKVLLVVNVASKCGLTQSNYKEL---NVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQ---EVACTMFKAEFPIF 136 (201)
Q Consensus 63 ~~~gk~~lv~f~~~~C~~C~~~~~~l---~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 136 (201)
.-++|+++|++.++||+.|...-..+ .++.+-+. +++.+++.+++ +.+... .++.+.+|...
T Consensus 52 k~e~K~LlVyLhs~~~~~~~~f~~~~L~~~~V~~~l~-~nfV~w~~dv~--------~~e~~~~~~~~~~~~~g~~~--- 119 (178)
T 2ec4_A 52 ARDRKLLAIYLHHDESVLTNVFCSQMLCAESIVSYLS-QNFITWAWDLT--------KDSNRARFLTMCNRHFGSVV--- 119 (178)
T ss_dssp TTTCCEEEEEEECSSCSHHHHHHHHTTTCHHHHHHHH-HTEEEEEEECC--------SHHHHHHHHHHHHHHTCHHH---
T ss_pred hhhCcEEEEEEeCCCCccHHHHHHHhcCCHHHHHHHH-cCEEEEEEeCC--------CchhhhhhhhhhhhhhHHHH---
Confidence 45689999999999999988666322 11222222 25888888765 333332 22222111110
Q ss_pred eeeccCCCCchhhHHHHHhhcCCcccccccccceEEEECCCC---cEEEecCCCCCchhhhhccc
Q 028944 137 DKIDVNGKNAAPIYKFLKSEKGGFLGDAIKWNFTKFLVNKEG---KVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 137 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G---~i~~~~~g~~~~~~l~~~l~ 198 (201)
... .+ . ..+...|++++|+++| +++.+..|..+++++.+.|.
T Consensus 120 ----------a~~---~~--~-----~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~ 164 (178)
T 2ec4_A 120 ----------AQT---IR--T-----QKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLM 164 (178)
T ss_dssp ----------HHH---HH--H-----SCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHH
T ss_pred ----------HHH---Hh--h-----cCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHH
Confidence 000 00 0 1445559999998764 78999999999988776654
No 271
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.26 E-value=0.00072 Score=41.99 Aligned_cols=22 Identities=9% Similarity=0.125 Sum_probs=18.4
Q ss_pred EEEEeecCCCCcHHhHHHHHHH
Q 028944 70 LVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
++.|+++|||+|+...+.|.+.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~ 24 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK 24 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC
Confidence 5678899999999988888764
No 272
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.14 E-value=0.00077 Score=44.41 Aligned_cols=33 Identities=21% Similarity=0.355 Sum_probs=22.4
Q ss_pred EEEEEEee-----cCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 68 VLLVVNVA-----SKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 68 ~~lv~f~~-----~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++| |+. +|||+|++..+.|.++ ++.+..+.++
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~-------~i~~~~vdi~ 55 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNST-------GVEYETFDIL 55 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHH-------TCCCEEEEGG
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHC-------CCCeEEEECC
Confidence 3444 666 9999999988888775 2444555554
No 273
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=97.03 E-value=0.0015 Score=41.65 Aligned_cols=33 Identities=9% Similarity=0.048 Sum_probs=23.5
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++.|+++|||+|++..+.|.+. ++.+..+.++
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~-------~i~~~~~di~ 39 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK-------GAEFNEIDAS 39 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT-------TCCCEEEEST
T ss_pred cEEEEECCCChhHHHHHHHHHHc-------CCCcEEEECC
Confidence 36678899999999888877653 3444455554
No 274
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.99 E-value=0.0015 Score=43.67 Aligned_cols=22 Identities=18% Similarity=0.202 Sum_probs=17.7
Q ss_pred EEEEeecCCCCcHHhHHHHHHH
Q 028944 70 LVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
++.|+.+|||+|++..+.|.++
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL 40 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCcHHHHHHHHHHc
Confidence 4448899999999888877764
No 275
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=96.83 E-value=0.0032 Score=47.25 Aligned_cols=89 Identities=8% Similarity=0.003 Sum_probs=57.7
Q ss_pred EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccceeeeeccCCCCch
Q 028944 68 VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIFDKIDVNGKNAA 147 (201)
Q Consensus 68 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 147 (201)
..++.|...||+.|....+.+.++.++++++ +.++.+..+. +.....+ +++|+.-
T Consensus 133 ~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~-i~F~~vd~~~---------~~~~~~l-~~fgl~~-------------- 187 (227)
T 4f9z_D 133 IHLLLIMNKASPEYEENMHRYQKAAKLFQGK-ILFILVDSGM---------KENGKVI-SFFKLKE-------------- 187 (227)
T ss_dssp EEEEEEECTTSTTHHHHHHHHHHHHHHTTTT-CEEEEEETTS---------GGGHHHH-HHTTCCG--------------
T ss_pred eEEEEEEcCCcchHHHHHHHHHHHHHHhhCC-EEEEEeCCcc---------HhHHHHH-HHcCCCc--------------
Confidence 4445565779999999999999999999886 8888886541 1122233 3334320
Q ss_pred hhHHHHHhhcCCcccccccccceEEEECCCCcEEEec-CCCCCchhhhhcccC
Q 028944 148 PIYKFLKSEKGGFLGDAIKWNFTKFLVNKEGKVVERY-APTTSPLKIEVGTTI 199 (201)
Q Consensus 148 ~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~-~g~~~~~~l~~~l~~ 199 (201)
...|++.+++..+...+.+ .+..+.+.+++.++.
T Consensus 188 ------------------~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~ 222 (227)
T 4f9z_D 188 ------------------SQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDG 222 (227)
T ss_dssp ------------------GGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHH
T ss_pred ------------------ccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHH
Confidence 0118888888655433343 366788888877654
No 276
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.73 E-value=0.0017 Score=42.38 Aligned_cols=26 Identities=12% Similarity=0.047 Sum_probs=21.5
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHH
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
.+..|+.|+++|||+|++..+.|.+.
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~ 39 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK 39 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC
Confidence 34567779999999999999888875
No 277
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.05 E-value=0.012 Score=38.88 Aligned_cols=26 Identities=27% Similarity=0.405 Sum_probs=19.1
Q ss_pred cCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 76 SKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 76 ~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
+|||+|++..+.|.+. |+.+..+.++
T Consensus 28 ~~Cp~C~~ak~~L~~~-------~i~~~~vdi~ 53 (109)
T 1wik_A 28 AKCGFSKQILEILNST-------GVEYETFDIL 53 (109)
T ss_dssp CCSSTHHHHHHHHHHT-------CSCEEEEESS
T ss_pred CCCchHHHHHHHHHHc-------CCCeEEEECC
Confidence 8999999888877664 4555566655
No 278
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.02 E-value=0.0072 Score=41.37 Aligned_cols=21 Identities=10% Similarity=0.205 Sum_probs=16.3
Q ss_pred EEEEeecCCCCcHHh-HHHHHH
Q 028944 70 LVVNVASKCGLTQSN-YKELNV 90 (201)
Q Consensus 70 lv~f~~~~C~~C~~~-~~~l~~ 90 (201)
|+.|+.+|||+|++. .+.|.+
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~ 60 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQE 60 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTT
T ss_pred EEEEECCCCCchHHHHHHHHHh
Confidence 677889999999987 555544
No 279
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.97 E-value=0.0055 Score=38.70 Aligned_cols=23 Identities=9% Similarity=0.187 Sum_probs=19.2
Q ss_pred EEEEEeecCCCCcHHhHHHHHHH
Q 028944 69 LLVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
.++.|+++|||+|+...+.|.+.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~ 29 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK 29 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH
T ss_pred eEEEEECCCChhHHHHHHHHHHc
Confidence 36778999999999988888764
No 280
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=95.79 E-value=0.01 Score=37.07 Aligned_cols=33 Identities=6% Similarity=0.012 Sum_probs=23.2
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEee
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFP 106 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs 106 (201)
.++.|+.+|||+|++....|.+. . ..+.++-|.
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~----~-i~~~~~~vd 37 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEEN----N-IAFDETIID 37 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT----T-CCCEEEECC
T ss_pred EEEEEEcCCChhHHHHHHHHHHc----C-CCceEEEee
Confidence 47778899999999887777653 1 235666554
No 281
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=95.22 E-value=0.087 Score=38.69 Aligned_cols=38 Identities=8% Similarity=0.017 Sum_probs=30.1
Q ss_pred EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEee
Q 028944 68 VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFP 106 (201)
Q Consensus 68 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs 106 (201)
..|.+|+..-||.|-...+.|.++.+++++ ++.|.-..
T Consensus 3 ~~I~~~~D~~CP~cy~~~~~l~~l~~~~~~-~v~v~~~p 40 (208)
T 3kzq_A 3 IKLYYVHDPMCSWCWGYKPTIEKLKQQLPG-VIQFEYVV 40 (208)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHSCT-TSEEEEEE
T ss_pred eEEEEEECCCCchhhhhhHHHHHHHHhCCC-CceEEEEe
Confidence 357778889999999999999999999964 35554443
No 282
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=94.97 E-value=0.014 Score=45.11 Aligned_cols=39 Identities=10% Similarity=0.161 Sum_probs=31.8
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeec
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPC 107 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~ 107 (201)
|+.+++.|+-+.||+|++..+.+.+..++ -.+.++.+.+
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~~---~~Vr~i~~Pi 185 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLKE---NTVRMVVVGW 185 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHHH---CEEEEEECCC
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhhC---CcEEEEEeec
Confidence 57899999999999999999999977665 2377777653
No 283
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=94.77 E-value=0.021 Score=38.95 Aligned_cols=58 Identities=17% Similarity=0.346 Sum_probs=36.3
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCc-cccee
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKA-EFPIF 136 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 136 (201)
|+.|..+|||.|.+.-..|.+.. .+. ..+.++-|..+ .+.+++++++++..|. .+|.+
T Consensus 16 Vvvysk~~Cp~C~~ak~lL~~~~-~~~-v~~~~idid~~-------~d~~~~~~~l~~~~G~~tVP~I 74 (127)
T 3l4n_A 16 IIIFSKSTCSYSKGMKELLENEY-QFI-PNYYIIELDKH-------GHGEELQEYIKLVTGRGTVPNL 74 (127)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHE-EEE-SCCEEEEGGGS-------TTHHHHHHHHHHHHSCCSSCEE
T ss_pred EEEEEcCCCccHHHHHHHHHHhc-ccC-CCcEEEEecCC-------CCHHHHHHHHHHHcCCCCcceE
Confidence 66777899999998887777631 011 13666666543 2456777777553343 36654
No 284
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=94.60 E-value=0.028 Score=40.79 Aligned_cols=44 Identities=16% Similarity=0.221 Sum_probs=34.9
Q ss_pred CCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 65 RGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 65 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++++|+.|..-.||+|++..+.+.++.+++....++++.-...
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~~p 56 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRLQS 56 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEECC
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEEcC
Confidence 45799999999999999999999988888772223777766653
No 285
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=94.19 E-value=0.12 Score=32.71 Aligned_cols=12 Identities=33% Similarity=0.221 Sum_probs=10.1
Q ss_pred EEEEeecCCCCc
Q 028944 70 LVVNVASKCGLT 81 (201)
Q Consensus 70 lv~f~~~~C~~C 81 (201)
|+.|..++||.|
T Consensus 4 v~ly~~~~C~~c 15 (93)
T 1t1v_A 4 LRVYSTSVTGSR 15 (93)
T ss_dssp EEEEECSSCSCH
T ss_pred EEEEEcCCCCCc
Confidence 556778999999
No 286
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=94.11 E-value=0.11 Score=35.39 Aligned_cols=53 Identities=15% Similarity=0.127 Sum_probs=35.1
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccc
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFP 134 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (201)
+..|..++||.|++....|.+. +-.+.++-|.-+ +.+.+++++++. ..+..+.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~-----gi~y~~~di~~~------~~~~~el~~~l~-~~~~~~~ 55 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH-----EIPFVERNIFSE------PLSIDEIKQILR-MTEDGTD 55 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT-----TCCEEEEETTTS------CCCHHHHHHHHH-TCSSCGG
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCceEEEEccCC------CccHHHHHHHHH-HcCCCHH
Confidence 4567789999999888877763 222445545433 567899999984 3455443
No 287
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=94.01 E-value=0.11 Score=38.43 Aligned_cols=49 Identities=14% Similarity=-0.052 Sum_probs=37.1
Q ss_pred eecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHH-HhcCC-CeEEEEeec
Q 028944 59 VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYE-KYKNQ-DFEVLAFPC 107 (201)
Q Consensus 59 ~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~-~~~~~-~~~vv~vs~ 107 (201)
..+..-.++++|+.|..-.||+|++..+.+....+ +|.+. .++++....
T Consensus 8 ~~~G~~~a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 8 HLLGNPAAKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp EEESCTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred ceecCCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 34555567899999999999999999988866555 78433 477776655
No 288
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=93.78 E-value=0.16 Score=34.13 Aligned_cols=55 Identities=22% Similarity=0.254 Sum_probs=38.4
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCccccee
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIF 136 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (201)
+..|..++|+.|++....|.+. +-.++++-|.-+ +.+.+++++++. ..|.++.-+
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~-----gi~~~~~di~~~------~~~~~eL~~~l~-~~g~~~~~l 59 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL-----AWDYDAIDIKKN------PPAASLIRNWLE-NSGLELKKF 59 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----TCCEEEEETTTS------CCCHHHHHHHHH-HSCCCGGGG
T ss_pred EEEEeCCCChHHHHHHHHHHHc-----CCceEEEEeccC------chhHHHHHHHHH-HcCCCHHHH
Confidence 4556789999999988887763 223556666544 569999999995 457654433
No 289
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=93.77 E-value=0.045 Score=44.08 Aligned_cols=42 Identities=7% Similarity=0.026 Sum_probs=34.3
Q ss_pred cEEEEEEeecCCCCcHHhHHHHHHHHHHhcCC-CeEEEEeecC
Q 028944 67 KVLLVVNVASKCGLTQSNYKELNVLYEKYKNQ-DFEVLAFPCN 108 (201)
Q Consensus 67 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~vs~d 108 (201)
+..++.|...+|+.|...++.+.++.++++++ .+.++.|..+
T Consensus 248 ~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~~~~ki~F~~id~~ 290 (367)
T 3us3_A 248 GIHIVAFAEEADPDGYEFLEILKSVAQDNTDNPDLSIIWIDPD 290 (367)
T ss_dssp TEEEEEECCTTSHHHHHHHHHHHHHHHHTTTCTTCCEEEECGG
T ss_pred CcEEEEEEcCCChhHHHHHHHHHHHHHHcCCCCceEEEEECCc
Confidence 35666788888888999999999999999985 4888888654
No 290
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=93.71 E-value=0.1 Score=41.57 Aligned_cols=41 Identities=7% Similarity=-0.020 Sum_probs=31.8
Q ss_pred cEEEEEEeecCCCCcHHhHHHHHHHHHHhcC-CCeEEEEeec
Q 028944 67 KVLLVVNVASKCGLTQSNYKELNVLYEKYKN-QDFEVLAFPC 107 (201)
Q Consensus 67 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~-~~~~vv~vs~ 107 (201)
+..++.|...+|+.|....+.+.++.+++++ +.+.++.+..
T Consensus 246 ~~~~l~f~~~~~~~~~~~~~~~~~vA~~~~~~~~~~f~~id~ 287 (350)
T 1sji_A 246 GIHIVAFAERSDPDGYEFLEILKQVARDNTDNPDLSIVWIDP 287 (350)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHHHHHHHGGGCSSCCEEEECG
T ss_pred CcEEEEEEcCCCccHHHHHHHHHHHHHHhCCCCceEEEEECc
Confidence 3345557788998899999999999999984 4577777754
No 291
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.59 E-value=0.22 Score=32.76 Aligned_cols=14 Identities=29% Similarity=0.458 Sum_probs=11.5
Q ss_pred EEEEEeecCCCCcH
Q 028944 69 LLVVNVASKCGLTQ 82 (201)
Q Consensus 69 ~lv~f~~~~C~~C~ 82 (201)
.|+.|..++||.|.
T Consensus 9 ~V~vy~~~~C~~C~ 22 (111)
T 2ct6_A 9 VIRVFIASSSGFVA 22 (111)
T ss_dssp CEEEEECSSCSCHH
T ss_pred EEEEEEcCCCCCcc
Confidence 35667789999999
No 292
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=93.49 E-value=0.42 Score=36.84 Aligned_cols=39 Identities=15% Similarity=0.213 Sum_probs=29.8
Q ss_pred cEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 67 KVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 67 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
++.|..|...+||.|+.--..|.++..++ ++..+.+.++
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~---~vi~l~~~v~ 81 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG---DVVGLSYHVD 81 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT---SSEEEEEECS
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC---CeeeEEEEEE
Confidence 36777888999999999999998887653 4655666654
No 293
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=93.38 E-value=0.16 Score=34.12 Aligned_cols=52 Identities=13% Similarity=0.143 Sum_probs=35.4
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCccc
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEF 133 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (201)
+..|..++|+.|++....|.+. +-.+.++-|.-+ +.+.+++++++.. .+..+
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~-----gi~~~~~di~~~------~~~~~el~~~l~~-~~~~~ 53 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH-----DVVFQEHNIMTS------PLSRDELLKILSY-TENGT 53 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-----TCCEEEEETTTS------CCCHHHHHHHHHH-CSSTH
T ss_pred EEEEeCCCCHHHHHHHHHHHHc-----CCCeEEEecccC------CCcHHHHHHHHhh-cCCCH
Confidence 4566779999999888877652 223555555434 5689999999953 45554
No 294
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=93.12 E-value=0.37 Score=32.45 Aligned_cols=35 Identities=9% Similarity=-0.064 Sum_probs=26.7
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEe
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAF 105 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~v 105 (201)
++++||-||.+||..| .+.+.++.+.+ + ++.+..+
T Consensus 39 ~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~-d~~F~~t 73 (124)
T 2l4c_A 39 TEVAVIGFFQDLEIPA---VPILHSMVQKF-P-GVSFGIS 73 (124)
T ss_dssp SSEEEEEECSCTTSTH---HHHHHHHHHHC-T-TSEEEEE
T ss_pred CCCEEEEEECCCCChh---HHHHHHHHHhC-C-CceEEEE
Confidence 5799999999999998 55677777777 3 3766554
No 295
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=92.86 E-value=0.051 Score=37.42 Aligned_cols=34 Identities=12% Similarity=0.153 Sum_probs=21.5
Q ss_pred EEEEEEee----cCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 68 VLLVVNVA----SKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 68 ~~lv~f~~----~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++|+..+ +|||.|++....|.+. |+.+..+.++
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~-------gv~y~~vdI~ 73 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAAC-------GERFAYVDIL 73 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTT-------CSCCEEEEGG
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHc-------CCceEEEECC
Confidence 45555554 8999999877776553 3444455544
No 296
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=92.84 E-value=0.29 Score=30.40 Aligned_cols=21 Identities=29% Similarity=0.366 Sum_probs=16.6
Q ss_pred EEEEeec----CCCCcHHhHHHHHH
Q 028944 70 LVVNVAS----KCGLTQSNYKELNV 90 (201)
Q Consensus 70 lv~f~~~----~C~~C~~~~~~l~~ 90 (201)
++.|..+ |||+|++....|++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~ 26 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV 26 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH
Confidence 4567789 99999987777766
No 297
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=92.71 E-value=0.5 Score=35.33 Aligned_cols=37 Identities=11% Similarity=-0.102 Sum_probs=29.5
Q ss_pred cccccceEEEECCCCcEEEecCCCCCchhhhhcccCC
Q 028944 164 AIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTIP 200 (201)
Q Consensus 164 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 200 (201)
+|+..|+.++++++|+...........+.+..+|+++
T Consensus 202 ~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 202 GVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp TCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred CCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 7788899999999999997766655666777777665
No 298
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=92.48 E-value=0.16 Score=34.14 Aligned_cols=55 Identities=15% Similarity=0.009 Sum_probs=38.3
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCccccee
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFPIF 136 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (201)
+..|..++|+.|++....|.+. +-.+.++-|.-+ +.+.+++++++.. .|.++.-+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~-----gi~~~~~di~~~------~~~~~eL~~~l~~-~g~~~~~l 60 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIEN-----NIEYTNRLIVDD------NPTVEELKAWIPL-SGLPVKKF 60 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHHT-----TCCCEEEETTTT------CCCHHHHHHHHHH-HTSCGGGG
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCceEEEecccC------cCCHHHHHHHHHH-cCCCHHHe
Confidence 4566789999999988877652 223566666544 5699999999954 57654433
No 299
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=92.33 E-value=0.13 Score=34.11 Aligned_cols=49 Identities=8% Similarity=0.103 Sum_probs=34.1
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcC
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFK 130 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~ 130 (201)
+..|..++|+.|++....|.+. +-.+.++-|.-+ +.+.++++++++. .|
T Consensus 2 i~iY~~~~C~~C~kak~~L~~~-----gi~~~~~di~~~------~~~~~~l~~~~~~-~g 50 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDEH-----KVAYDFHDYKAV------GIDREHLRRWCAE-HG 50 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT-----TCCEEEEEHHHH------CCCHHHHHHHHHH-HC
T ss_pred EEEEECCCChHHHHHHHHHHHC-----CCceEEEeecCC------CCCHHHHHHHHHh-CC
Confidence 4466789999999888777762 223556666544 4578999999854 46
No 300
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=92.07 E-value=0.13 Score=34.04 Aligned_cols=16 Identities=19% Similarity=0.484 Sum_probs=13.3
Q ss_pred cCCCCcHHhHHHHHHH
Q 028944 76 SKCGLTQSNYKELNVL 91 (201)
Q Consensus 76 ~~C~~C~~~~~~l~~~ 91 (201)
+|||+|++....|.+.
T Consensus 29 ~~Cp~C~~ak~~L~~~ 44 (111)
T 3zyw_A 29 PRCGFSKQMVEILHKH 44 (111)
T ss_dssp BSSHHHHHHHHHHHHT
T ss_pred CcchhHHHHHHHHHHc
Confidence 9999999888777653
No 301
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=91.89 E-value=0.34 Score=32.47 Aligned_cols=24 Identities=17% Similarity=0.343 Sum_probs=17.0
Q ss_pred EEEEEEee----cCCCCcHHhHHHHHHH
Q 028944 68 VLLVVNVA----SKCGLTQSNYKELNVL 91 (201)
Q Consensus 68 ~~lv~f~~----~~C~~C~~~~~~l~~~ 91 (201)
.++|+--. +|||+|++....|.+.
T Consensus 17 ~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 17 PVVLFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp SEEEEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred CEEEEEeccCCCCCCccHHHHHHHHHHc
Confidence 44444444 4999999988888775
No 302
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=91.70 E-value=0.2 Score=33.52 Aligned_cols=50 Identities=10% Similarity=0.057 Sum_probs=35.2
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCc
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKA 131 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~ 131 (201)
+..|..++|+.|++....|.+. +-.++++-|.-+ +.+.+++++++++ .|.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~-----gi~y~~~di~~~------~~~~~~l~~~~~~-~g~ 56 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH-----GIDYTFHDYKKE------GLDAETLDRFLKT-VPW 56 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH-----TCCEEEEEHHHH------CCCHHHHHHHHHH-SCG
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCcEEEEeeeCC------CCCHHHHHHHHHH-cCh
Confidence 5566789999999988888774 223566666544 4578999999854 563
No 303
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=90.04 E-value=0.28 Score=32.79 Aligned_cols=16 Identities=19% Similarity=0.521 Sum_probs=12.5
Q ss_pred cCCCCcHHhHHHHHHH
Q 028944 76 SKCGLTQSNYKELNVL 91 (201)
Q Consensus 76 ~~C~~C~~~~~~l~~~ 91 (201)
+|||+|.+....|.+.
T Consensus 33 p~Cp~C~~ak~lL~~~ 48 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH 48 (118)
T ss_dssp BSSHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHc
Confidence 3999999877777653
No 304
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=89.79 E-value=0.31 Score=33.72 Aligned_cols=51 Identities=10% Similarity=0.238 Sum_probs=34.4
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcc
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAE 132 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~ 132 (201)
+..|..++|+.|++....|.+. +-.+.++-|.-+ +.+.++++++... .+.+
T Consensus 4 itiY~~p~C~~crkak~~L~~~-----gi~~~~idi~~~------~~~~~eL~~~~~~-~g~p 54 (141)
T 1s3c_A 4 ITIYHNPASGTSRNTLEMIRNS-----GTEPTIILYLEN------PPSRDELVKLIAD-MGIS 54 (141)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-----TCCCEEECTTTS------CCCHHHHHHHHHH-HTSC
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCCEEEEECCCC------CccHHHHHHHhcc-cCCC
Confidence 3456779999999888777662 222445555433 5689999999954 4664
No 305
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=89.73 E-value=0.23 Score=32.54 Aligned_cols=16 Identities=25% Similarity=0.519 Sum_probs=12.8
Q ss_pred cCCCCcHHhHHHHHHH
Q 028944 76 SKCGLTQSNYKELNVL 91 (201)
Q Consensus 76 ~~C~~C~~~~~~l~~~ 91 (201)
+|||+|++....|.+.
T Consensus 31 p~Cp~C~~ak~~L~~~ 46 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL 46 (109)
T ss_dssp BSSHHHHHHHHHHHHT
T ss_pred CCChhHHHHHHHHHHc
Confidence 3999999887777764
No 306
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=89.56 E-value=0.28 Score=32.94 Aligned_cols=50 Identities=10% Similarity=0.199 Sum_probs=34.4
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCc
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKA 131 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~ 131 (201)
+..|..++|+.|++....|.+. +-.++++-|.-+ +.+.+++++++.. .|.
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~~-----gi~~~~~di~~~------~~~~~eL~~~l~~-~g~ 56 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQQ-----GITPQVVLYLET------PPSVDKLKELLQQ-LGF 56 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHTT-----TCCCEEECTTTS------CCCHHHHHHHHHH-TTC
T ss_pred EEEEECCCCHHHHHHHHHHHHc-----CCCcEEEeeccC------CCcHHHHHHHHHh-cCC
Confidence 4566789999999887777642 112455555433 5699999999954 576
No 307
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=87.84 E-value=0.28 Score=32.84 Aligned_cols=51 Identities=16% Similarity=0.200 Sum_probs=36.7
Q ss_pred EEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcc
Q 028944 70 LVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAE 132 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~ 132 (201)
+..|..++|+.|++....|.+. +-.+.++-|.-+ +-+.++++++++. .|.+
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~~-----gi~~~~~di~~~------~~t~~eL~~~l~~-~g~~ 56 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLENQ-----GIAPQVIKYLET------SPSVEELKRLYQQ-LGLN 56 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHHT-----TCCCEEECHHHH------CCCHHHHHHHHHH-HTCS
T ss_pred EEEEECCCChHHHHHHHHHHHc-----CCceEEEEeccC------cCcHHHHHHHHHH-cCCc
Confidence 4456679999999988887752 223566666555 5689999999954 5765
No 308
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=87.19 E-value=1.7 Score=29.10 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=19.7
Q ss_pred EEEEeecCCCCcH--HhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 70 LVVNVASKCGLTQ--SNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 70 lv~f~~~~C~~C~--~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
|..|..+.||.|. +.-....++. ..+|+.+--+.++
T Consensus 2 V~vYtt~~c~~c~~kk~c~~aK~lL---~~kgV~feEidI~ 39 (121)
T 1u6t_A 2 IRVYIASSSGSTAIKKKQQDVLGFL---EANKIGFEEKDIA 39 (121)
T ss_dssp EEEEECTTCSCHHHHHHHHHHHHHH---HHTTCCEEEEECT
T ss_pred EEEEecCCCCCccchHHHHHHHHHH---HHCCCceEEEECC
Confidence 5566789999994 1112223333 2345665555554
No 309
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=85.13 E-value=4.1 Score=27.01 Aligned_cols=39 Identities=18% Similarity=0.385 Sum_probs=29.1
Q ss_pred cEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCC
Q 028944 67 KVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQF 110 (201)
Q Consensus 67 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~ 110 (201)
|.+++-|.-+.|+.|...-..|.++ .++ +.++.|++=.+
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~l----ede-Y~ilrVNIlSf 40 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEEL----KSE-YDILHVDILSF 40 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTT----TTT-EEEEEEECCCC
T ss_pred CceEEEeCCCccHHHHHHHHHHHHh----hcc-ccEEEEEeeee
Confidence 5789999999999999877777444 443 67777775443
No 310
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=83.61 E-value=2.6 Score=31.62 Aligned_cols=43 Identities=12% Similarity=0.118 Sum_probs=24.4
Q ss_pred CcEEEEEEeecCCCCcH----HhHHHHHHHHHHhcCC--CeEEEEeecC
Q 028944 66 GKVLLVVNVASKCGLTQ----SNYKELNVLYEKYKNQ--DFEVLAFPCN 108 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~----~~~~~l~~~~~~~~~~--~~~vv~vs~d 108 (201)
+++.++.|+...+..+. .....+.++.++++++ .+.++.+..+
T Consensus 129 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k~~~~~F~~~d~~ 177 (252)
T 2h8l_A 129 GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRK 177 (252)
T ss_dssp SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEETT
T ss_pred CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHccccCceEEEEEEchH
Confidence 34455555544332222 3566777788888754 3777777543
No 311
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=80.45 E-value=1.8 Score=32.22 Aligned_cols=25 Identities=8% Similarity=0.082 Sum_probs=19.1
Q ss_pred cEEEEEEeecCCCCcHHhHHHHHHH
Q 028944 67 KVLLVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 67 k~~lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
...++.|..+|||.|++....|.+.
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~ 193 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK 193 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH
T ss_pred cceEEEEECCCChHHHHHHHHHHHc
Confidence 3456777889999999887777653
No 312
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=80.29 E-value=7.3 Score=26.68 Aligned_cols=39 Identities=5% Similarity=0.024 Sum_probs=24.3
Q ss_pred EEEEEEeec-CCCCcHHhHHHHHHHHHHhcCCCeEEEEeec
Q 028944 68 VLLVVNVAS-KCGLTQSNYKELNVLYEKYKNQDFEVLAFPC 107 (201)
Q Consensus 68 ~~lv~f~~~-~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~ 107 (201)
++.+.+|.. .-+.-....+.+.+++++++++ +.++.|..
T Consensus 33 ~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk-i~Fv~vd~ 72 (147)
T 3bj5_A 33 KTHILLFLPKSVSDYDGKLSNFKTAAESFKGK-ILFAFIDS 72 (147)
T ss_dssp CEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT-CEEEEECT
T ss_pred ceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc-eEEEEEec
Confidence 444443443 2233445678889999999875 77777754
No 313
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=80.21 E-value=0.75 Score=36.95 Aligned_cols=17 Identities=12% Similarity=0.358 Sum_probs=12.8
Q ss_pred EEEEeecCCCCcHHhHH
Q 028944 70 LVVNVASKCGLTQSNYK 86 (201)
Q Consensus 70 lv~f~~~~C~~C~~~~~ 86 (201)
|+.|..+|||.|++...
T Consensus 263 VvVYsk~~CPyC~~Ak~ 279 (362)
T 2jad_A 263 IFVASKTYCPYSHAALN 279 (362)
T ss_dssp EEEEECTTCHHHHHHHH
T ss_pred EEEEEcCCCcchHHHHH
Confidence 55566799999997654
No 314
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=77.47 E-value=2.3 Score=35.92 Aligned_cols=35 Identities=11% Similarity=-0.069 Sum_probs=23.3
Q ss_pred cccccceEEEECCCCcEEEecCCCCCchhhhhccc
Q 028944 164 AIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTT 198 (201)
Q Consensus 164 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 198 (201)
+|+..|+.++++++|++...-......+.+..+|+
T Consensus 202 gV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~l~ 236 (519)
T 3t58_A 202 GVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSYLR 236 (519)
T ss_dssp TCCCSSEEEEEETTSCEEECCCSSCSHHHHHHHHT
T ss_pred CCCCCCeEEEEeCCCceeecccccccHHHHHHHHH
Confidence 78888999999999998755333333333444444
No 315
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=76.14 E-value=2.7 Score=30.41 Aligned_cols=36 Identities=3% Similarity=-0.344 Sum_probs=27.1
Q ss_pred ccccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 163 DAIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 163 ~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
.+|..+|++++. .+|+.+....|..+.+.+.+.|++
T Consensus 172 ~gv~g~Pt~~i~-~~G~~~~~~~G~~~~~~l~~~l~~ 207 (216)
T 2in3_A 172 WGISGFPALVVE-SGTDRYLITTGYRPIEALRQLLDT 207 (216)
T ss_dssp TTCCSSSEEEEE-ETTEEEEEESSCCCHHHHHHHHHH
T ss_pred cCCcccceEEEE-ECCEEEEeccCCCCHHHHHHHHHH
Confidence 378888997665 478876677888888888877754
No 316
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=73.23 E-value=3.1 Score=27.67 Aligned_cols=15 Identities=20% Similarity=0.598 Sum_probs=9.7
Q ss_pred cCCCCcHHhHHHHHH
Q 028944 76 SKCGLTQSNYKELNV 90 (201)
Q Consensus 76 ~~C~~C~~~~~~l~~ 90 (201)
+.||+|.+....|.+
T Consensus 33 P~C~fc~~ak~lL~~ 47 (118)
T 2wul_A 33 PQCGFSNAVVQILRL 47 (118)
T ss_dssp BSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 468888776655543
No 317
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=71.61 E-value=0.28 Score=23.89 Aligned_cols=20 Identities=15% Similarity=0.145 Sum_probs=16.9
Q ss_pred CCCCcHHhHHHHHHHHHHhc
Q 028944 77 KCGLTQSNYKELNVLYEKYK 96 (201)
Q Consensus 77 ~C~~C~~~~~~l~~~~~~~~ 96 (201)
-||.|+..+|.+..+...|.
T Consensus 5 ~CpvCk~q~Pd~kt~~~H~e 24 (28)
T 2jvx_A 5 CCPKCQYQAPDMDTLQIHVM 24 (28)
T ss_dssp ECTTSSCEESSHHHHHHHHH
T ss_pred cCccccccCcChHHHHHHHH
Confidence 59999999998888877765
No 318
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=69.64 E-value=4.7 Score=34.30 Aligned_cols=56 Identities=11% Similarity=0.154 Sum_probs=32.3
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCc-cccee
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKA-EFPIF 136 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 136 (201)
-++.|..+|||.|+..-..|.+. +..+..+-|..+ ++.+++++.+++..+. .+|.+
T Consensus 19 ~v~vy~~~~Cp~C~~~k~~L~~~-----~i~~~~~dv~~~-------~~~~~~~~~l~~~~g~~tvP~v 75 (598)
T 2x8g_A 19 AVILFSKTTCPYCKKVKDVLAEA-----KIKHATIELDQL-------SNGSAIQKCLASFSKIETVPQM 75 (598)
T ss_dssp SEEEEECTTCHHHHHHHHHHHHT-----TCCCEEEEGGGS-------TTHHHHHHHTHHHHSCCCSCEE
T ss_pred CEEEEECCCChhHHHHHHHHHHC-----CCCcEEEEcccC-------cchHHHHHHHHHHhCCceeCEE
Confidence 46667889999999777776653 122555555433 1234455544332333 46655
No 319
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=66.32 E-value=6.6 Score=31.33 Aligned_cols=41 Identities=15% Similarity=0.084 Sum_probs=24.6
Q ss_pred CcEEEEEEeecCCCC-cHHhHHHHHHHHHHhcCCCeEEEEeec
Q 028944 66 GKVLLVVNVASKCGL-TQSNYKELNVLYEKYKNQDFEVLAFPC 107 (201)
Q Consensus 66 gk~~lv~f~~~~C~~-C~~~~~~l~~~~~~~~~~~~~vv~vs~ 107 (201)
++++++.|+..+|.. |......+.+...++++ .+.++.|..
T Consensus 236 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~i~f~~id~ 277 (382)
T 2r2j_A 236 GLPFLILFHMKEDTESLEIFQNEVARQLISEKG-TINFLHADC 277 (382)
T ss_dssp CCCEEEEEECTTCCHHHHHHHHHHHHHTGGGTT-TSEEEEEET
T ss_pred CCcEEEEEecCCchHHHHHHHHHHHHHHHHhCC-eeEEEEEch
Confidence 567777777777644 44444555555555543 377777653
No 320
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=65.52 E-value=11 Score=27.51 Aligned_cols=35 Identities=9% Similarity=-0.019 Sum_probs=26.7
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEe
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAF 105 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~v 105 (201)
++++||-|+++|| ....+.+.++.+.+. .+.+...
T Consensus 27 ~~v~vVgff~~~~---~~~~~~f~~~A~~l~--~~~F~~t 61 (227)
T 4f9z_D 27 TEVAVIGFFQDLE---IPAVPILHSMVQKFP--GVSFGIS 61 (227)
T ss_dssp SSEEEEEECSCSC---STHHHHHHHHTTTCT--TSEEEEE
T ss_pred CCeEEEEEecCCC---chhHHHHHHHHHhCC--CceEEEE
Confidence 5789999999885 677888888888883 4666554
No 321
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=64.08 E-value=1.9 Score=31.29 Aligned_cols=38 Identities=11% Similarity=0.038 Sum_probs=26.9
Q ss_pred EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEee
Q 028944 68 VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFP 106 (201)
Q Consensus 68 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs 106 (201)
+.|..|+...||.|....+.+.++.+ +.+.++.|.-..
T Consensus 8 ~~I~~f~D~~CP~C~~~~~~~~~l~~-~~~~~v~v~~~~ 45 (216)
T 2in3_A 8 PVLWYIADPMCSWCWGFAPVIENIRQ-EYSAFLTVKIMP 45 (216)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHH-HHTTTCEEEEEE
T ss_pred eeEEEEECCCCchhhcchHHHHHHHh-cCCCCeEEEEee
Confidence 45777778899999988888888877 433345555443
No 322
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=63.49 E-value=6.1 Score=29.51 Aligned_cols=41 Identities=10% Similarity=0.026 Sum_probs=22.7
Q ss_pred CCcEEEEEEeec-CC---CCc-HHhHHHHHHHHHHhcCCCeEEEEeec
Q 028944 65 RGKVLLVVNVAS-KC---GLT-QSNYKELNVLYEKYKNQDFEVLAFPC 107 (201)
Q Consensus 65 ~gk~~lv~f~~~-~C---~~C-~~~~~~l~~~~~~~~~~~~~vv~vs~ 107 (201)
.|++.++.|... .+ +.+ ......+.++.++++ + +.++.+..
T Consensus 131 ~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-k-i~F~~~d~ 176 (250)
T 3ec3_A 131 SKRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-E-YTFAIADE 176 (250)
T ss_dssp CSSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-T-SEEEEEET
T ss_pred ccCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-c-eeEEEEcH
Confidence 356655555532 22 222 335667777777777 3 66666643
No 323
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=61.41 E-value=3.5 Score=27.85 Aligned_cols=30 Identities=13% Similarity=0.073 Sum_probs=22.1
Q ss_pred ceEEEECCCCcEEEec-CCCCCchhhhhccc
Q 028944 169 FTKFLVNKEGKVVERY-APTTSPLKIEVGTT 198 (201)
Q Consensus 169 P~~~lid~~G~i~~~~-~g~~~~~~l~~~l~ 198 (201)
|...++|.+|+.+.+. ....+.+++.+.|+
T Consensus 57 P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~ 87 (129)
T 2a2p_A 57 PELVLLSRNYQELERIPLSQMTRDEINALVQ 87 (129)
T ss_dssp CEEEEECSSSCCCEEEECSSSCHHHHHHHHH
T ss_pred CEEEEecCCCCEEEEeecccCCHHHHHHHHH
Confidence 8999999999976653 44457777777664
No 324
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=59.90 E-value=0.86 Score=23.23 Aligned_cols=20 Identities=15% Similarity=0.398 Sum_probs=15.4
Q ss_pred CCCCcHHhHHHHHHHHHHhc
Q 028944 77 KCGLTQSNYKELNVLYEKYK 96 (201)
Q Consensus 77 ~C~~C~~~~~~l~~~~~~~~ 96 (201)
-||.|.+.+..-.+|..-|.
T Consensus 7 iCP~C~~~l~s~~~L~~Hye 26 (34)
T 3mjh_B 7 ICPQCMKSLGSADELFKHYE 26 (34)
T ss_dssp ECTTTCCEESSHHHHHHHHH
T ss_pred CCcHHHHHcCCHHHHHHHHH
Confidence 49999988887777776664
No 325
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=57.04 E-value=19 Score=26.71 Aligned_cols=41 Identities=10% Similarity=0.157 Sum_probs=30.2
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCC-CeEEEEee
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQ-DFEVLAFP 106 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~-~~~vv~vs 106 (201)
||..+-+|+..-||.|-.-.+.|.++.+++..+ ++.|.-..
T Consensus 1 ~~~~I~~~~D~~cPwcyig~~~l~~a~~~~~~~~~v~v~~~P 42 (239)
T 3gl5_A 1 GHMRVEIWSDIACPWCYVGKARFEKALAAFPHRDGVEVVHRS 42 (239)
T ss_dssp -CEEEEEEECSSCHHHHHHHHHHHHHHHTCTTGGGEEEEEEE
T ss_pred CCeEEEEEEeCcCHhHHHHHHHHHHHHHhcCccCceEEEEEE
Confidence 455666666689999999999999999888643 56655444
No 326
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=56.89 E-value=37 Score=21.98 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=25.0
Q ss_pred EEeecCCCC--cH----HhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 72 VNVASKCGL--TQ----SNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 72 ~f~~~~C~~--C~----~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
+=-+-.|+. |- .++-.+....+.++.+|+.|--.++.
T Consensus 10 fepamCCstGvCG~~vd~eL~~~~~~~~~lk~~Gi~V~RyNL~ 52 (106)
T 3ktb_A 10 FDPAMCCPTGLCGTNINPELMRIAVVIESLKKQGIIVTRHNLR 52 (106)
T ss_dssp EECSCSSTTSCSSSCCCHHHHHHHHHHHHHHHTTCCCEEEETT
T ss_pred echhhccCCCCcCCCCCHHHHHHHHHHHHHHHCCCEEEEEccc
Confidence 334556654 54 56667777777777788888777765
No 327
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=55.29 E-value=7.3 Score=18.03 Aligned_cols=15 Identities=0% Similarity=0.239 Sum_probs=12.5
Q ss_pred eEEEECCCCcEEEec
Q 028944 170 TKFLVNKEGKVVERY 184 (201)
Q Consensus 170 ~~~lid~~G~i~~~~ 184 (201)
.+.|+|++|+++...
T Consensus 6 ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 6 SSKIYDNKNQLIADL 20 (26)
T ss_pred CCEEEeCCCCEeeec
Confidence 358999999999875
No 328
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=54.08 E-value=63 Score=23.78 Aligned_cols=36 Identities=6% Similarity=0.113 Sum_probs=25.9
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEe
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAF 105 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~v 105 (201)
.++++|-|+.++| ....+.+.++.+.+++. +.+...
T Consensus 25 ~~v~vVgff~~~~---~~~~~~F~~~A~~lr~~-~~F~~t 60 (250)
T 3ec3_A 25 DDVVILGVFQGVG---DPGYLQYQDAANTLRED-YKFHHT 60 (250)
T ss_dssp SSCEEEEECSCTT---CHHHHHHHHHHHHHTTT-CCEEEE
T ss_pred CCeEEEEEEcCCC---chHHHHHHHHHHhhhcC-cEEEEE
Confidence 4678888888764 67778888888888654 555554
No 329
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=50.93 E-value=49 Score=21.57 Aligned_cols=34 Identities=9% Similarity=0.057 Sum_probs=17.8
Q ss_pred ecCCCC--cH----HhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 75 ASKCGL--TQ----SNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 75 ~~~C~~--C~----~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
+-.|+. |- .++-.+....+.++++|+.|--.++.
T Consensus 10 amCCstGvCG~~vd~~L~~~~~~~~~lk~~Gi~V~RyNL~ 49 (110)
T 3kgk_A 10 AMAASTGVCGTDVDQALVDFSTDVQWLKQSGVQIERFNLA 49 (110)
T ss_dssp C-------------CHHHHHHHHHHHHHHHTCCEEEEETT
T ss_pred hhccccCCcCCCCCHHHHHHHHHHHHHHHCCCeEEEEccc
Confidence 445654 65 34556666666667778887777765
No 330
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=49.51 E-value=11 Score=26.98 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=27.5
Q ss_pred EEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEe
Q 028944 69 LLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAF 105 (201)
Q Consensus 69 ~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~v 105 (201)
.|.+|+..-||.|....+.|.++.+++.- .+.+-.+
T Consensus 2 ~I~~~~D~~CP~cy~~~~~l~~~~~~~~~-~v~~~p~ 37 (203)
T 2imf_A 2 IVDFYFDFLSPFSYLANQRLSKLAQDYGL-TIRYNAI 37 (203)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHHHHHCC-EEEEEEC
T ss_pred eEEEEEeCCCHHHHHHHHHHHHHHHHcCC-eEEEEee
Confidence 35667778999999999999999999852 2444444
No 331
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=49.44 E-value=50 Score=24.33 Aligned_cols=36 Identities=6% Similarity=0.005 Sum_probs=25.5
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEe
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAF 105 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~v 105 (201)
+++++|-|+.+|| ....+.+.++...+++. +.+..+
T Consensus 24 ~~v~vvgff~~~~---~~~~~~f~~~A~~lr~~-~~F~~~ 59 (252)
T 2h8l_A 24 KDASIVGFFDDSF---SEAHSEFLKAASNLRDN-YRFAHT 59 (252)
T ss_dssp SSCEEEEEESCTT---SHHHHHHHHHHHHTTTT-SCEEEE
T ss_pred CCeEEEEEECCCC---ChHHHHHHHHHHhcccC-cEEEEE
Confidence 3577888888774 66677888888888654 655554
No 332
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=47.16 E-value=30 Score=22.79 Aligned_cols=54 Identities=2% Similarity=-0.009 Sum_probs=35.2
Q ss_pred CCCcEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcc
Q 028944 64 YRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAE 132 (201)
Q Consensus 64 ~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~ 132 (201)
|+|.++|+++-.-. . .. .+.++.+.+...|+.+++|.-. +.+.+++.+.+ .|+.
T Consensus 45 F~~aPVVlDl~~l~--~-~~---dl~~L~~~l~~~gl~~vGV~g~--------~~~~~~~~a~~-~GLp 98 (120)
T 3ghf_A 45 LKHAPVVINVSGLE--S-PV---NWPELHKIVTSTGLRIIGVSGC--------KDASLKVEIDR-MGLP 98 (120)
T ss_dssp HTTCEEEEEEEECC--S-SC---CHHHHHHHHHTTTCEEEEEESC--------CCHHHHHHHHH-HTCC
T ss_pred hCCCcEEEEccccC--C-hH---HHHHHHHHHHHcCCEEEEEeCC--------CcHHHHHHHHH-CCCC
Confidence 58899999986432 1 12 3566666677778999999843 44556676643 3544
No 333
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=44.94 E-value=1.2 Score=20.90 Aligned_cols=11 Identities=18% Similarity=0.353 Sum_probs=8.8
Q ss_pred cCCCCcHHhHH
Q 028944 76 SKCGLTQSNYK 86 (201)
Q Consensus 76 ~~C~~C~~~~~ 86 (201)
--||.|+..+|
T Consensus 7 vqcpvcqq~mp 17 (29)
T 3vhs_A 7 VQCPVCQQMMP 17 (29)
T ss_dssp EECTTTCCEEE
T ss_pred eeChHHHHhCc
Confidence 46999998776
No 334
>3tlk_A Ferrienterobactin-binding periplasmic protein; ferric-enterobactin, trimer, siderophore transport, periplas space, metal transport; HET: EB4; 1.85A {Escherichia coli}
Probab=44.52 E-value=10 Score=29.41 Aligned_cols=22 Identities=9% Similarity=0.042 Sum_probs=0.0
Q ss_pred hhHhHHHHHHHHHHHHHHHhhc
Q 028944 6 MKNSNWVSFLFIVFAFFLYFYK 27 (201)
Q Consensus 6 m~~~~~~~~~~~~~~~~~~~~~ 27 (201)
|+++++....++++++.++.|+
T Consensus 1 m~~~~~~~~~~l~~~~~l~gc~ 22 (326)
T 3tlk_A 1 MRLAPLYRNALLLTGLLLSGIA 22 (326)
T ss_dssp ----------------------
T ss_pred CcchHHHHHHHHHHHHHHhccc
Confidence 5555555554444444444443
No 335
>3qax_A Probable ABC transporter arginine-binding protein; periplasmic, transport PR; HET: ARG; 2.00A {Chlamydophila pneumoniae} PDB: 3g41_A* 3n26_A*
Probab=44.43 E-value=7.3 Score=28.49 Aligned_cols=13 Identities=23% Similarity=0.360 Sum_probs=8.6
Q ss_pred cccceEEecCCCC
Q 028944 45 SIYDFTVKDIRGN 57 (201)
Q Consensus 45 ~~p~f~l~~~~G~ 57 (201)
..|++...+.+|+
T Consensus 40 ~~~P~~~~~~~g~ 52 (268)
T 3qax_A 40 TYPPFEYVDAQGE 52 (268)
T ss_dssp CBTTTBEECTTSC
T ss_pred CCCCceEECCCCC
Confidence 4577777776665
No 336
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=43.14 E-value=1.6e+02 Score=25.33 Aligned_cols=35 Identities=11% Similarity=0.091 Sum_probs=27.9
Q ss_pred CCCcccceEEecC-CCCeeecCC-CC--CcEEEEEEeec
Q 028944 42 APKSIYDFTVKDI-RGNDVSLSG-YR--GKVLLVVNVAS 76 (201)
Q Consensus 42 ~~~~~p~f~l~~~-~G~~~~l~~-~~--gk~~lv~f~~~ 76 (201)
.|..+|++.+... +|..+.+.+ +. |+++|+.|-..
T Consensus 481 ~G~r~p~~~~~~~~~g~~~~l~~~l~~~g~~~ll~~~~~ 519 (665)
T 1pn0_A 481 VGTRFKSQPVVRHSEGLWMHFGDRLVTDGRFRIIVFAGK 519 (665)
T ss_dssp TTSBCCCCEEEETTTTEEEEGGGGCCCSSCEEEEEEEEC
T ss_pred CcCCCCCCeEEecCCCcEEEHhHhhccCCCEEEEEecCC
Confidence 7999999999764 888888777 43 68999998653
No 337
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=42.67 E-value=15 Score=26.86 Aligned_cols=35 Identities=6% Similarity=-0.029 Sum_probs=26.4
Q ss_pred EEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEe
Q 028944 68 VLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAF 105 (201)
Q Consensus 68 ~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~v 105 (201)
..|.+|+..-||.|-...+.|.++.+++ ++.|.-.
T Consensus 6 ~~I~~~~D~~CP~Cy~~~~~l~~l~~~~---~~~v~~~ 40 (226)
T 1r4w_A 6 RVLELFYDVLSPYSWLGFEVLCRYQHLW---NIKLKLR 40 (226)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHTTTS---SEEEEEE
T ss_pred ceEEEEEeCCChHHHHHHHHHHHHHHHc---CCeEEEE
Confidence 4566777789999999999999987665 3555443
No 338
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=42.52 E-value=11 Score=25.29 Aligned_cols=30 Identities=20% Similarity=0.072 Sum_probs=21.9
Q ss_pred ceEEEECCCCcEEEecC-CCCCchhhhhccc
Q 028944 169 FTKFLVNKEGKVVERYA-PTTSPLKIEVGTT 198 (201)
Q Consensus 169 P~~~lid~~G~i~~~~~-g~~~~~~l~~~l~ 198 (201)
|...++|.+|+.+.+.. ...+.+.+.+.|+
T Consensus 63 P~LvLlD~~Ge~~E~I~IekW~tD~I~efL~ 93 (126)
T 2a4h_A 63 PVVKLLDASGKVQETLSITKWNTDTVEEFFE 93 (126)
T ss_dssp CEEEECCSSSCCSEEEECSSSSCSHHHHHHH
T ss_pred CEEEEecCCCCEeeEeccccCCHHHHHHHHH
Confidence 89999999999766643 4556676666553
No 339
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=42.36 E-value=6.9 Score=28.46 Aligned_cols=30 Identities=10% Similarity=0.028 Sum_probs=22.5
Q ss_pred cccccceEEEECCCCcEEEecCCCCCchhhhhcccC
Q 028944 164 AIKWNFTKFLVNKEGKVVERYAPTTSPLKIEVGTTI 199 (201)
Q Consensus 164 ~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 199 (201)
+|..+|+++| +|+. +.|..+.+.+++.|++
T Consensus 165 GV~GtPtfvv---ng~~---~~G~~~~e~l~~~i~~ 194 (205)
T 3gmf_A 165 NVSGTPSFMI---DGIL---LAGTHDWASLRPQILA 194 (205)
T ss_dssp CCCSSSEEEE---TTEE---CTTCCSHHHHHHHHHH
T ss_pred CCccCCEEEE---CCEE---EeCCCCHHHHHHHHHH
Confidence 7888899665 5764 5788888888887754
No 340
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=39.21 E-value=39 Score=20.25 Aligned_cols=40 Identities=8% Similarity=0.106 Sum_probs=24.9
Q ss_pred CC-CeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHHHHHh
Q 028944 55 RG-NDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKY 95 (201)
Q Consensus 55 ~G-~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~ 95 (201)
+| ..+.+-++++..+.|.+-. .|..|...-..+++...+.
T Consensus 23 dGGGdvelv~v~~g~V~v~l~G-aC~gc~Tlk~gIe~~L~~~ 63 (74)
T 1th5_A 23 TGGGGLQFLMIKGPIVKVRLTG-PAAVVRTVRIAVSKKLREK 63 (74)
T ss_dssp TTCCCCCCCEEETTEEEECCCS-SSSSSSSHHHHHHHHHHHH
T ss_pred cCCCcEEEEEEeCCEEEEEEec-CCcchHHHHHHHHHHHHHH
Confidence 55 6777777766666666654 4888954444566554443
No 341
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=34.68 E-value=29 Score=22.80 Aligned_cols=9 Identities=11% Similarity=0.102 Sum_probs=4.4
Q ss_pred HHHHHHHHH
Q 028944 118 NEEIQEVAC 126 (201)
Q Consensus 118 ~~~~~~~~~ 126 (201)
...+.+.++
T Consensus 96 ~~~l~~~l~ 104 (138)
T 5nul_A 96 MRDFEERMN 104 (138)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 345555553
No 342
>4ev1_A Anabena TIC22; TIC22 fold, chaperon, protein transport, TIC22-like family, thylakoids, chaperone; HET: NHE; 1.95A {Anabaena SP}
Probab=34.59 E-value=1.1e+02 Score=23.11 Aligned_cols=58 Identities=17% Similarity=0.187 Sum_probs=35.2
Q ss_pred CcccceEEecCCCCeeecCCCC-------CcEEEEEEeecCCCCcHHhHH-HHHHHHH---------HhcCCCeEEEEee
Q 028944 44 KSIYDFTVKDIRGNDVSLSGYR-------GKVLLVVNVASKCGLTQSNYK-ELNVLYE---------KYKNQDFEVLAFP 106 (201)
Q Consensus 44 ~~~p~f~l~~~~G~~~~l~~~~-------gk~~lv~f~~~~C~~C~~~~~-~l~~~~~---------~~~~~~~~vv~vs 106 (201)
..+|-|+++|.+|..+-...-. ++.+...|+ |+.+.. .|.++.. ++. .+++|..|+
T Consensus 12 ~~VPVF~Itn~~G~Pll~~~~~~~~~~~~~~~V~~~F~------s~~dA~~~L~~lk~~~~~np~~~~~~-~~~kV~~vs 84 (252)
T 4ev1_A 12 DSVPIYLVTNEKGLPLSRPLPNAPNGQKAGGSITGAYM------SRQEAQAFINELRNAKNKDPKMQEIV-KSLQVTAVP 84 (252)
T ss_dssp TTSEEEEEECTTCCBCEEECCCCTTSCCSCSEEEEEES------CHHHHHHHHHHHHHCSSCCHHHHHHH-TTCEEEEEE
T ss_pred cCCcEEEEECCCCCeEEEecCCccccccCCCeEEEEEe------cHHHHHHHHHHHHhccccCchhhhhc-cCceEEEee
Confidence 4678999999999987544322 344444443 343333 4444544 333 358999997
Q ss_pred cC
Q 028944 107 CN 108 (201)
Q Consensus 107 ~d 108 (201)
++
T Consensus 85 L~ 86 (252)
T 4ev1_A 85 LG 86 (252)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 343
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=32.85 E-value=89 Score=19.35 Aligned_cols=34 Identities=21% Similarity=0.318 Sum_probs=20.4
Q ss_pred CCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHH
Q 028944 55 RGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELN 89 (201)
Q Consensus 55 ~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~ 89 (201)
+|..+.+-++++..+.|.+- --|..|+...-.|.
T Consensus 26 dGGdvelv~v~~g~V~V~L~-GaC~gCpss~~TLk 59 (88)
T 1xhj_A 26 DGGDCTLVDVEDGIVKLQLH-GACGTCPSSTITLK 59 (88)
T ss_dssp HSCEEEEEECCSSEEEEEEE-SSCCSSCHHHHHHH
T ss_pred cCCeEEEEEEECCEEEEEEe-ecCCCCcchHHHHH
Confidence 56677777776666666665 34555554444444
No 344
>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}
Probab=32.34 E-value=1.2e+02 Score=24.26 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=31.2
Q ss_pred HHhHHHHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCccc
Q 028944 82 QSNYKELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEF 133 (201)
Q Consensus 82 ~~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (201)
.+..|.+.++.+.++++|+.+.-||-. ..+-++.++ ++.|+.|
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg--------~~~~v~~ia-~~lg~~y 262 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSAS--------FIDIVRAFA-TDTNNNY 262 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEE--------EHHHHHHHH-HCTTSSC
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCC--------cHHHHHHHH-HHhCccc
Confidence 456788888999999999999998854 455566665 5455544
No 345
>3hug_B Probable conserved membrane protein; ECF sigma factor, zinc binding anti-sigma factor, oxidative transcription regulation; 2.35A {Mycobacterium tuberculosis}
Probab=30.95 E-value=12 Score=24.41 Aligned_cols=22 Identities=14% Similarity=0.110 Sum_probs=19.6
Q ss_pred cCCCCcHHhHHHHHHHHHHhcC
Q 028944 76 SKCGLTQSNYKELNVLYEKYKN 97 (201)
Q Consensus 76 ~~C~~C~~~~~~l~~~~~~~~~ 97 (201)
..|+.|+.++..++++...+..
T Consensus 52 a~Cp~CR~ev~eL~~~~a~L~~ 73 (108)
T 3hug_B 52 AGCPECRGAVTELCGVPALLSQ 73 (108)
T ss_dssp HTCHHHHHHHHHHTTHHHHHTT
T ss_pred HhCHHHHHHHHHHHHHHHHHhc
Confidence 4799999999999999888875
No 346
>3cwf_A Alkaline phosphatase synthesis sensor protein PHO; PAS domain, alkaline phosphatase synthesi protein PHOR, structural genomics, PSI-2; HET: EPE; 2.20A {Bacillus subtilis subsp}
Probab=29.86 E-value=27 Score=22.45 Aligned_cols=15 Identities=20% Similarity=0.392 Sum_probs=13.2
Q ss_pred eEEEECCCCcEEEec
Q 028944 170 TKFLVNKEGKVVERY 184 (201)
Q Consensus 170 ~~~lid~~G~i~~~~ 184 (201)
++.|||++|+|++.-
T Consensus 50 rItiiD~~G~Vl~dS 64 (122)
T 3cwf_A 50 SASVIDTDGKVLYGS 64 (122)
T ss_dssp EEEEEETTSCEEEET
T ss_pred EEEEECCCCcEEEeC
Confidence 678999999999865
No 347
>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A*
Probab=29.62 E-value=98 Score=25.83 Aligned_cols=56 Identities=9% Similarity=0.084 Sum_probs=43.6
Q ss_pred CcEEEEEEeecCCCCcHHhHHHHHHHHHHhc-CCCeEEEEeecCCCCCCCCCCHHHHHHHHHh
Q 028944 66 GKVLLVVNVASKCGLTQSNYKELNVLYEKYK-NQDFEVLAFPCNQFAGQEPGSNEEIQEVACT 127 (201)
Q Consensus 66 gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~ 127 (201)
+..++|.|.+|.--.-++.+|.|-.++.+-. ..++.||++.-.+ -+.++.++.+.+
T Consensus 4 ~~~~~VIFGatGDLA~RKL~PaLy~L~~~g~Lp~~~~iiG~aR~~------~~~~~~r~~~~~ 60 (489)
T 2bh9_A 4 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSR------LTVADIRKQSEP 60 (489)
T ss_dssp CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEESSC------CCHHHHHHHHGG
T ss_pred CCeEEEEeCCcHHHHHHhHHHHHHHHHHcCCCCCCcEEEEEeCCC------CCHHHHHHHHHH
Confidence 4578999999998889999999999987643 3469999998663 466777666644
No 348
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=27.54 E-value=20 Score=25.79 Aligned_cols=21 Identities=14% Similarity=0.161 Sum_probs=17.5
Q ss_pred cCCCCcHHhHHHHHHHHHHhc
Q 028944 76 SKCGLTQSNYKELNVLYEKYK 96 (201)
Q Consensus 76 ~~C~~C~~~~~~l~~~~~~~~ 96 (201)
..|+.|+.++..++++...+.
T Consensus 33 ~~C~~Cr~~v~~l~~~~~~l~ 53 (195)
T 2q1z_B 33 SLCDECRARAGALDAVGGSLM 53 (195)
T ss_dssp HHCHHHHHHHHHHHHHHHHHH
T ss_pred hHCHHHHHHHHHHHHHHHHHh
Confidence 369999999999999886653
No 349
>3ga8_A HTH-type transcriptional regulator MQSA (YGIT/B30; helix-turn-helix, Zn-binding protein, DNA-binding, transcrip transcription regulation; HET: PE4; 1.70A {Escherichia coli k-12} PDB: 3hi2_A
Probab=26.89 E-value=62 Score=19.25 Aligned_cols=34 Identities=9% Similarity=0.196 Sum_probs=21.7
Q ss_pred CCCCcEEEE-EEeecCCCCcH------HhHHHHHHHHHHhc
Q 028944 63 GYRGKVLLV-VNVASKCGLTQ------SNYKELNVLYEKYK 96 (201)
Q Consensus 63 ~~~gk~~lv-~f~~~~C~~C~------~~~~~l~~~~~~~~ 96 (201)
+++|+.++| +.-+.+|+.|- .....+.++..+++
T Consensus 23 ~~~G~~~~I~~Vp~~~C~~CGE~~~~~e~~~~~~~~~~~f~ 63 (78)
T 3ga8_A 23 TFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFR 63 (78)
T ss_dssp EETTEEEEEEEEEEEEETTTCCEECCHHHHHHHHHHHHHHH
T ss_pred EECCEEEEEcCceeEECCCCCCEEECHHHHHHHHHHHHHHH
Confidence 457876666 55788899884 44555555555554
No 350
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=26.88 E-value=24 Score=25.75 Aligned_cols=14 Identities=14% Similarity=0.128 Sum_probs=9.8
Q ss_pred CcccceEEecCCCC
Q 028944 44 KSIYDFTVKDIRGN 57 (201)
Q Consensus 44 ~~~p~f~l~~~~G~ 57 (201)
...|+|...+.+|+
T Consensus 37 ~~~~P~~~~~~~g~ 50 (259)
T 4dz1_A 37 PASPPMLFKSADGK 50 (259)
T ss_dssp CCBTTTBEECTTCC
T ss_pred CCCCCeEEECCCCC
Confidence 34688888877665
No 351
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=25.61 E-value=58 Score=24.40 Aligned_cols=22 Identities=23% Similarity=0.363 Sum_probs=9.6
Q ss_pred HHHHHHHHhcCCCeEEEEeecC
Q 028944 87 ELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 87 ~l~~~~~~~~~~~~~vv~vs~d 108 (201)
.++++.+++++.|-+++.+..|
T Consensus 43 ~~~~~~~~i~~~g~~~~~~~~D 64 (254)
T 4fn4_A 43 RLNQIVQELRGMGKEVLGVKAD 64 (254)
T ss_dssp HHHHHHHHHHHTTCCEEEEECC
T ss_pred HHHHHHHHHHhcCCcEEEEEcc
Confidence 3444444444334444444444
No 352
>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}
Probab=25.08 E-value=1.3e+02 Score=18.61 Aligned_cols=27 Identities=15% Similarity=0.130 Sum_probs=18.7
Q ss_pred CCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCccc
Q 028944 98 QDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEF 133 (201)
Q Consensus 98 ~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (201)
.++.-+++.++ +.+.+.+.++++ |...
T Consensus 80 ~g~~~~~~~v~--------d~~~~~~~l~~~-G~~~ 106 (134)
T 3l7t_A 80 CGLRHLAFYVE--------DVEASRQELIAL-GIRV 106 (134)
T ss_dssp SEEEEEEEECS--------CHHHHHHHHHHH-TCCC
T ss_pred CCeEEEEEEEC--------CHHHHHHHHHhC-CCcc
Confidence 35777888876 577777777554 6654
No 353
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=24.56 E-value=69 Score=18.53 Aligned_cols=29 Identities=10% Similarity=0.038 Sum_probs=21.1
Q ss_pred ceEEEECCCCcEEEecCCCCCchhhhhcc
Q 028944 169 FTKFLVNKEGKVVERYAPTTSPLKIEVGT 197 (201)
Q Consensus 169 P~~~lid~~G~i~~~~~g~~~~~~l~~~l 197 (201)
.++-|...||+++..-.+..+.....+.|
T Consensus 13 frfrLka~NGevI~sSe~Y~sk~~a~~gI 41 (64)
T 3bid_A 13 YRWRLKAANHEIIAQGEGYTSKQNCQHAV 41 (64)
T ss_dssp EEEEEECTTSCEEEECCCBSCHHHHHHHH
T ss_pred EEEEEEeCCCCEEEECCCcCCHHHHHHHH
Confidence 45679999999999877766665544444
No 354
>2ijr_A Hypothetical protein API92; structural genomics, PSI, protein structure initiative; 2.70A {Yersinia pseudotuberculosis} SCOP: e.66.1.1
Probab=24.16 E-value=66 Score=24.71 Aligned_cols=37 Identities=14% Similarity=0.055 Sum_probs=26.1
Q ss_pred CCCeeecCCCCCcEEEEEEeecCCCCcHHhHHHHHHH
Q 028944 55 RGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVL 91 (201)
Q Consensus 55 ~G~~~~l~~~~gk~~lv~f~~~~C~~C~~~~~~l~~~ 91 (201)
.|+.++...-...-+-+.|-++|||+-...+..|.+.
T Consensus 208 ~Gh~~~~~r~g~~~L~v~FDTPW~PPs~ev~~~lS~~ 244 (300)
T 2ijr_A 208 SGQNIIWQRDRINSLRLDFDSPSYPPSAELMGELSAV 244 (300)
T ss_dssp SCEEEEEEEEETTEEEEEEEEESSCCCHHHHHHHHHH
T ss_pred CCCceeEEeCCCCeEEEeccCCCCCChHHHHHHHhcc
Confidence 4444444433346788999999999988877777664
No 355
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=24.04 E-value=1.6e+02 Score=22.16 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=27.1
Q ss_pred ceEEecCCCCeeecCCC------CC-cEEEEEEeecCCCCcHHhHHHHHHHHHHhcCCCeEEEEeecC
Q 028944 48 DFTVKDIRGNDVSLSGY------RG-KVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCN 108 (201)
Q Consensus 48 ~f~l~~~~G~~~~l~~~------~g-k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 108 (201)
++++...+|..+...-+ .+ +++||.+....+ ....... .+.+.+.++|+.|+.+..-
T Consensus 70 ~~~~~~~~g~~~~~~~~~p~~~~~~~~p~vv~~hG~~~-~~~~~~~---~~~~~l~~~G~~v~~~d~~ 133 (367)
T 2hdw_A 70 KVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFGA-VKEQSSG---LYAQTMAERGFVTLAFDPS 133 (367)
T ss_dssp EEEEECTTSCEEEEEEEEESSCCSSCEEEEEEECCTTC-CTTSHHH---HHHHHHHHTTCEEEEECCT
T ss_pred EEEEecCCCCEEEEEEEeCCCCCCCCCCEEEEECCCCC-cchhhHH---HHHHHHHHCCCEEEEECCC
Confidence 45556666765543222 23 355555543222 1111111 1333444568999988654
No 356
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A*
Probab=22.45 E-value=1.6e+02 Score=24.57 Aligned_cols=54 Identities=15% Similarity=0.174 Sum_probs=41.1
Q ss_pred cEEEEEEeecCCCCcHHhHHHHHHHHHHhc-CCCeEEEEeecCCCCCCCCCCHHHHHHHHH
Q 028944 67 KVLLVVNVASKCGLTQSNYKELNVLYEKYK-NQDFEVLAFPCNQFAGQEPGSNEEIQEVAC 126 (201)
Q Consensus 67 k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~ 126 (201)
...+|.|.+|.--.-++.+|.|-.++.+-. ..++.||++.-.+ -+.++.++.+.
T Consensus 5 ~~~~VIFGatGDLA~RKL~PaLy~L~~~g~Lp~~~~iiG~aR~~------~~~~~~r~~~~ 59 (485)
T 1dpg_A 5 KTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQA------LNDDEFKQLVR 59 (485)
T ss_dssp CEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSC------CCHHHHHHHHH
T ss_pred CeEEEEECCcHHHHHHhHHHHHHHHHhcCCCCCCcEEEEEeCCC------CCHHHHHHHHH
Confidence 468899999988889999999999987543 3469999998663 35566555543
No 357
>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}
Probab=22.07 E-value=1.4e+02 Score=18.16 Aligned_cols=26 Identities=23% Similarity=0.195 Sum_probs=17.1
Q ss_pred CeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCccc
Q 028944 99 DFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEF 133 (201)
Q Consensus 99 ~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (201)
++.-+++.++ +.+++.+.++++ |..+
T Consensus 73 g~~~~~~~v~--------d~~~~~~~l~~~-G~~~ 98 (126)
T 2p25_A 73 GLRHLAFKVE--------HIEEVIAFLNEQ-GIET 98 (126)
T ss_dssp SCCCEEEECS--------CHHHHHHHHHHT-TCCC
T ss_pred cceEEEEEeC--------CHHHHHHHHHHc-CCcc
Confidence 5556777765 577777777554 6654
No 358
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=21.26 E-value=1.6e+02 Score=19.43 Aligned_cols=45 Identities=11% Similarity=-0.020 Sum_probs=21.7
Q ss_pred cCCCC-cHHhHH-----HHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHH
Q 028944 76 SKCGL-TQSNYK-----ELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVAC 126 (201)
Q Consensus 76 ~~C~~-C~~~~~-----~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~ 126 (201)
+|||. |+.... .-..+.+.+.+-.+.+-+=+ +++-+.+.+.+.+.
T Consensus 87 ~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~~i~a~d------~~el~~~~i~~kl~ 137 (143)
T 1cfy_A 87 TWSPDTAPVRSKMVYASSKDALRRALNGVSTDVQGTD------FSEVSYDSVLERVS 137 (143)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHHCTTCCEEEEESS------GGGGSHHHHHHHHH
T ss_pred EECCCCCChhheeehHhhHHHHHHhcCCceEEEEeCC------hHHCCHHHHHHHHh
Confidence 67777 665444 34446666643334332222 11234556655553
No 359
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=21.25 E-value=41 Score=23.00 Aligned_cols=16 Identities=0% Similarity=-0.095 Sum_probs=10.1
Q ss_pred CCHHHHHHHHHhhcCcc
Q 028944 116 GSNEEIQEVACTMFKAE 132 (201)
Q Consensus 116 ~~~~~~~~~~~~~~~~~ 132 (201)
+....+.+.+++ .|..
T Consensus 96 ~a~~~l~~~l~~-~G~~ 111 (161)
T 3hly_A 96 EPIDALLAQFRN-LGLH 111 (161)
T ss_dssp CCHHHHHHHHHH-TTCE
T ss_pred HHHHHHHHHHHH-CCCE
Confidence 467777777754 3554
No 360
>3vk8_A Probable formamidopyrimidine-DNA glycosylase; DNA glycosylase, hneil1 ortholog, DNA lesion, thymine glycol zincless finger; HET: DNA CTG; 2.00A {Acanthamoeba polyphaga mimivirus} PDB: 3vk7_A* 3a42_A 3a46_A* 3a45_A*
Probab=20.51 E-value=17 Score=28.13 Aligned_cols=10 Identities=10% Similarity=-0.260 Sum_probs=7.5
Q ss_pred ecCCCCcHHh
Q 028944 75 ASKCGLTQSN 84 (201)
Q Consensus 75 ~~~C~~C~~~ 84 (201)
.-|||.|+..
T Consensus 279 t~~CP~CQ~~ 288 (295)
T 3vk8_A 279 TYWAPAIQKL 288 (295)
T ss_dssp EEECTTTCBC
T ss_pred cEECCCCCCC
Confidence 3589999854
No 361
>2p08_A Signal transduction histidine kinase; PAS-like domain, homologous to domain in soluble guanylyl CY transferase; 2.00A {Nostoc punctiforme} PDB: 2p04_A
Probab=20.51 E-value=57 Score=21.21 Aligned_cols=16 Identities=13% Similarity=0.193 Sum_probs=14.3
Q ss_pred ceEEEECCCCcEEEec
Q 028944 169 FTKFLVNKEGKVVERY 184 (201)
Q Consensus 169 P~~~lid~~G~i~~~~ 184 (201)
|.++++|++++|+...
T Consensus 12 PfHlvfd~~~~I~q~G 27 (115)
T 2p08_A 12 PFHFAFSRNREIVQTG 27 (115)
T ss_dssp TTCEEECTTCBEEEEC
T ss_pred CeEEEECCCCEEEEec
Confidence 8999999999998763
No 362
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=20.17 E-value=2.6e+02 Score=20.47 Aligned_cols=39 Identities=0% Similarity=-0.119 Sum_probs=21.8
Q ss_pred HHHHHHHHhcCCCeEEEEeecCCCCCCCCCCHHHHHHHHHhhcCcccc
Q 028944 87 ELNVLYEKYKNQDFEVLAFPCNQFAGQEPGSNEEIQEVACTMFKAEFP 134 (201)
Q Consensus 87 ~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (201)
...+..+++.++|+.++-.|-- +...+..+.+ ..+.+.+
T Consensus 42 ~~~~al~~l~~~G~~v~iaTGR--------~~~~~~~~~~-~l~~~~~ 80 (285)
T 3pgv_A 42 YAKETLKLLTARGINFVFATGR--------HYIDVGQIRD-NLGIRSY 80 (285)
T ss_dssp HHHHHHHHHHTTTCEEEEECSS--------CGGGGHHHHH-HHCSCCE
T ss_pred HHHHHHHHHHHCCCEEEEEcCC--------CHHHHHHHHH-hcCCCcc
Confidence 3444444556678887777622 4455666663 3466543
Done!