BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028945
(201 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6IV77|TAZ_MACMU Tafazzin OS=Macaca mulatta GN=TAZ PE=2 SV=1
Length = 262
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 MVVPFVHTGMQEVMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVA 59
+++P H GM +V+P FPR G+ +TVLIG P +++ + + S ++ A+
Sbjct: 178 IILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPILERLRAENKSAVEMRKALT 237
Query: 60 SRIGHRLKKLKLQVDRL 76
I ++LK Q ++L
Sbjct: 238 DFIQEEFQRLKTQAEQL 254
>sp|Q6IV78|TAZ_SAISC Tafazzin OS=Saimiri sciureus GN=TAZ PE=3 SV=1
Length = 262
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 MVVPFVHTGMQEVMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVA 59
+++P H GM +V+P FPR G+ +TVLIG P +++ + + S ++ A+
Sbjct: 178 IILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALT 237
Query: 60 SRIGHRLKKLKLQVDRL 76
I ++LK Q ++L
Sbjct: 238 DFIQEEFQRLKTQAEQL 254
>sp|Q6IV83|TAZ_GORGO Tafazzin OS=Gorilla gorilla gorilla GN=TAZ PE=3 SV=1
Length = 292
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 MVVPFVHTGMQEVMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVA 59
+++P H GM +V+P FPR G+ +TVLIG P +++ + + S ++ A+
Sbjct: 208 IILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALT 267
Query: 60 SRIGHRLKKLKLQVDRL 76
I ++LK Q ++L
Sbjct: 268 DFIQEEFQRLKTQAEQL 284
>sp|Q6IV76|TAZ_ERYPA Tafazzin OS=Erythrocebus patas GN=TAZ PE=2 SV=1
Length = 262
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 1 MVVPFVHTGMQEVMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVA 59
+++P H GM +V+P FPR G+ +TVLIG P +++ + + S ++ A+
Sbjct: 178 IILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALT 237
Query: 60 SRIGHRLKKLKLQVDRL 76
I ++LK Q ++L
Sbjct: 238 DFIQEEFQRLKTQAEQL 254
>sp|Q6IV84|TAZ_PANTR Tafazzin OS=Pan troglodytes GN=TAZ PE=3 SV=1
Length = 292
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 1 MVVPFVHTGMQEVMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVA 59
+++P H GM +V+P FPR G+ +TVLIG P +++ + + S ++ A+
Sbjct: 208 IILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALT 267
Query: 60 SRIGHRLKKLKLQVDRL 76
I + LK Q ++L
Sbjct: 268 DFIQEEFQHLKTQAEQL 284
>sp|Q16635|TAZ_HUMAN Tafazzin OS=Homo sapiens GN=TAZ PE=1 SV=1
Length = 292
Score = 43.5 bits (101), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 1 MVVPFVHTGMQEVMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVA 59
+++P H GM +V+P FPR G+ +TVLIG P +++ + + S ++ A+
Sbjct: 208 IILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKALT 267
Query: 60 SRIGHRLKKLKLQVDRL 76
I + LK Q ++L
Sbjct: 268 DFIQEEFQHLKTQAEQL 284
>sp|Q6IV82|TAZ_PONPY Tafazzin OS=Pongo pygmaeus GN=TAZ PE=3 SV=1
Length = 292
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 1 MVVPFVHTGMQEVMPIGAT-FPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVA 59
+++P H GM +V+P FPR G+ +TVLIG P +++ + + S ++ +
Sbjct: 208 IILPLWHVGMNDVLPNSPPYFPRFGQKITVLIGKPFSALPVLERLRAENKSAVEMRKVLT 267
Query: 60 SRIGHRLKKLKLQVDRL 76
I ++LK Q ++L
Sbjct: 268 DFIQEEFQRLKTQAEQL 284
>sp|Q54DX7|TAZ1_DICDI Putative lysophosphatidylcholine acyltransferase OS=Dictyostelium
discoideum GN=taz PE=3 SV=1
Length = 285
Score = 38.5 bits (88), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 1 MVVPFVHTGMQEVMPIGA-TFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYD 56
+VVP H GM++ MP+ PR+G + + +GD I D ++ +KY+ K+ D
Sbjct: 187 LVVPIYHQGMEKSMPLAKLPIPRVGINLDIKVGDNIYCDQVI----SKYIDDNKISD 239
>sp|Q9ZV87|NAPES_ARATH N-acylphosphatidylethanolamine synthase OS=Arabidopsis thaliana
GN=At1g78690 PE=2 SV=1
Length = 284
Score = 33.9 bits (76), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 1 MVVPFVHTGMQEVMPIGAT------FPRIGKTVTVLIGDPIEFD 38
+V+P +H G +E+MP P K + V++G+PIEFD
Sbjct: 177 IVLPIIHRGFEEMMPENYNNGRRPLVPLPNKHLKVVVGEPIEFD 220
>sp|P52324|RPOD_CAUCR RNA polymerase sigma factor RpoD OS=Caulobacter crescentus (strain
ATCC 19089 / CB15) GN=rpoD PE=3 SV=1
Length = 652
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 16 IGATFPRIGKTVTVLIGDPIEFDDLVDEEQTKYLSRGKLYDAVASRIGHRLKKLKLQVDR 75
I + F K L+G ++ +DL D ++ K Y+ +++ I LK LKL +R
Sbjct: 253 IASEFEAFRKLQDKLVGSRLKGEDLSDADR-------KAYEGLSATIIQHLKTLKLNNNR 305
Query: 76 LALEQPSAECVADILHMVDQESLGLQNHLLN--EDYSLAQEALVQSKL--DITPTQERSF 131
+ E + + L+ +++ +GL+ LL + Y +++ +++ ++ PT
Sbjct: 306 I-------EALVEQLYAINKRLIGLEGRLLRLADSYGISRGEFLKAYFGSELNPTWSEQV 358
Query: 132 FRMGLSYGDAFASRMRGYMD-PTELMGFAAR-GLFMNGRTTDIAAIVR-ERGPLRAWKQY 188
MG+ + + + D +E+ A G+ ++ + + + ER +A K+
Sbjct: 359 KAMGVRWTKFVENDSQSVTDIRSEIAALATETGVPIDDYRRIVQTVQKGEREARQAKKEM 418
Query: 189 MEANL 193
+EANL
Sbjct: 419 VEANL 423
>sp|Q6LTX5|Y837_PHOPR UPF0255 protein PBPRA0837 OS=Photobacterium profundum GN=PBPRA0837
PE=3 SV=1
Length = 419
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 93 VDQESLGLQNHL-LNEDYSLAQEALVQSKLDITPTQERSFFRMGLSYGDAFASRMRGYMD 151
+D S+G + L ED S +ALVQ D+ +GL +G A R+ G+M+
Sbjct: 232 LDMPSVGHSSRWALTEDTSRLHQALVQQIRDVPWVDNTKVAMLGLRFGANAAIRL-GFME 290
Query: 152 PTEL 155
PT L
Sbjct: 291 PTRL 294
>sp|Q39QM8|HEM1_GEOMG Glutamyl-tRNA reductase OS=Geobacter metallireducens (strain GS-15
/ ATCC 53774 / DSM 7210) GN=hemA PE=3 SV=1
Length = 434
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 5 FVHTGMQEVMPIGATFPRIGKTVTVLIGDPIEFDDLVDE 43
F++ G++ VM T+ R K G P+ FDDL D+
Sbjct: 201 FINNGVRGVMVTNRTYERAVKLAEEFEGKPVSFDDLFDQ 239
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,022,986
Number of Sequences: 539616
Number of extensions: 2815261
Number of successful extensions: 6815
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 6795
Number of HSP's gapped (non-prelim): 27
length of query: 201
length of database: 191,569,459
effective HSP length: 112
effective length of query: 89
effective length of database: 131,132,467
effective search space: 11670789563
effective search space used: 11670789563
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)