Query 028948
Match_columns 201
No_of_seqs 120 out of 173
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 07:50:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028948.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028948hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u83_A Phosphosulfolactate syn 100.0 1.7E-61 5.7E-66 425.9 15.8 165 9-187 24-205 (276)
2 1qwg_A PSL synthase;, (2R)-pho 100.0 2E-61 6.7E-66 421.1 15.9 158 19-187 8-182 (251)
3 3p6l_A Sugar phosphate isomera 95.4 0.082 2.8E-06 42.9 9.1 100 42-150 23-135 (262)
4 3lmz_A Putative sugar isomeras 94.7 0.071 2.4E-06 43.4 6.6 45 102-146 31-77 (257)
5 3p6l_A Sugar phosphate isomera 94.4 0.089 3E-06 42.8 6.6 46 102-147 23-80 (262)
6 2ekc_A AQ_1548, tryptophan syn 93.8 1.1 3.6E-05 37.9 12.4 112 26-148 20-152 (262)
7 1olt_A Oxygen-independent copr 93.7 0.29 9.8E-06 44.4 9.2 92 54-149 105-209 (457)
8 3vni_A Xylose isomerase domain 93.6 0.14 4.7E-06 42.1 6.4 47 102-148 18-65 (294)
9 3lmz_A Putative sugar isomeras 93.4 0.24 8.3E-06 40.2 7.5 101 42-151 31-134 (257)
10 1r30_A Biotin synthase; SAM ra 93.4 0.41 1.4E-05 41.7 9.4 98 39-147 100-211 (369)
11 3cqj_A L-ribulose-5-phosphate 93.3 0.16 5.3E-06 42.0 6.2 46 102-147 31-83 (295)
12 3tva_A Xylose isomerase domain 93.0 0.072 2.5E-06 43.9 3.7 47 102-148 22-69 (290)
13 3iix_A Biotin synthetase, puta 92.5 1 3.5E-05 38.3 10.4 100 39-148 85-196 (348)
14 1tv8_A MOAA, molybdenum cofact 92.5 1.3 4.6E-05 37.7 11.1 95 39-146 51-162 (340)
15 1qtw_A Endonuclease IV; DNA re 92.2 0.21 7.1E-06 40.6 5.5 45 102-146 13-63 (285)
16 2q02_A Putative cytoplasmic pr 92.1 0.23 7.7E-06 40.1 5.5 87 57-146 7-101 (272)
17 2qul_A D-tagatose 3-epimerase; 92.1 0.28 9.6E-06 39.9 6.1 47 102-148 18-65 (290)
18 3kws_A Putative sugar isomeras 91.8 2.3 7.7E-05 34.8 11.4 104 42-149 39-165 (287)
19 3vnd_A TSA, tryptophan synthas 91.7 1.1 3.8E-05 38.5 9.7 102 40-148 31-153 (267)
20 3tva_A Xylose isomerase domain 91.5 1 3.5E-05 36.8 8.9 107 42-150 25-159 (290)
21 2zds_A Putative DNA-binding pr 91.4 0.3 1E-05 40.8 5.6 46 102-147 16-68 (340)
22 3bw2_A 2-nitropropane dioxygen 91.3 0.84 2.9E-05 40.1 8.7 66 102-178 110-176 (369)
23 1yx1_A Hypothetical protein PA 90.9 0.15 5E-06 41.7 3.2 45 102-147 24-68 (264)
24 3ble_A Citramalate synthase fr 90.9 0.53 1.8E-05 41.4 7.0 136 42-190 101-259 (337)
25 3qc0_A Sugar isomerase; TIM ba 90.9 0.11 3.9E-06 41.9 2.5 85 57-146 5-99 (275)
26 1i60_A IOLI protein; beta barr 90.8 0.25 8.4E-06 39.8 4.5 86 58-147 2-101 (278)
27 3ktc_A Xylose isomerase; putat 90.8 0.23 7.9E-06 42.3 4.4 70 56-147 7-78 (333)
28 2x7v_A Probable endonuclease 4 90.7 0.22 7.5E-06 40.5 4.1 45 102-146 13-63 (287)
29 3cny_A Inositol catabolism pro 90.7 0.26 8.7E-06 40.4 4.5 41 102-147 32-72 (301)
30 3f4w_A Putative hexulose 6 pho 90.7 0.9 3.1E-05 36.1 7.7 97 39-149 11-109 (211)
31 3kws_A Putative sugar isomeras 90.6 0.37 1.3E-05 39.6 5.4 84 57-147 26-121 (287)
32 2qw5_A Xylose isomerase-like T 90.4 0.44 1.5E-05 40.3 5.9 44 105-148 35-86 (335)
33 3obe_A Sugar phosphate isomera 90.3 0.39 1.3E-05 40.6 5.4 45 102-146 37-92 (305)
34 3tha_A Tryptophan synthase alp 90.1 2.7 9.4E-05 36.0 10.6 105 39-150 26-148 (252)
35 3ajx_A 3-hexulose-6-phosphate 90.0 1.3 4.4E-05 35.0 8.0 94 39-146 11-106 (207)
36 3ngf_A AP endonuclease, family 89.5 0.45 1.5E-05 38.9 5.1 42 102-147 24-65 (269)
37 3c8f_A Pyruvate formate-lyase 89.3 1.5 5E-05 34.6 7.8 99 39-148 51-165 (245)
38 2zvr_A Uncharacterized protein 89.3 0.4 1.4E-05 39.5 4.7 43 102-146 42-84 (290)
39 2hk0_A D-psicose 3-epimerase; 89.3 0.41 1.4E-05 39.9 4.8 46 102-148 38-84 (309)
40 3nav_A Tryptophan synthase alp 89.3 1.1 3.7E-05 38.7 7.5 105 39-150 32-157 (271)
41 1q6o_A Humps, 3-keto-L-gulonat 88.8 1.2 4E-05 36.1 7.1 86 39-146 14-109 (216)
42 3aam_A Endonuclease IV, endoiv 88.7 0.71 2.4E-05 37.5 5.7 43 102-144 15-63 (270)
43 2vtf_A Endo-beta-N-acetylgluco 88.4 1.1 3.9E-05 43.1 7.7 90 50-143 88-201 (626)
44 3l23_A Sugar phosphate isomera 88.4 0.48 1.6E-05 39.9 4.6 46 102-147 30-76 (303)
45 3eeg_A 2-isopropylmalate synth 88.2 0.34 1.2E-05 42.6 3.7 110 71-190 123-244 (325)
46 3dx5_A Uncharacterized protein 88.1 0.28 9.7E-06 40.0 2.9 90 58-147 2-101 (286)
47 1ydn_A Hydroxymethylglutaryl-C 88.0 0.88 3E-05 38.7 6.1 99 41-142 83-196 (295)
48 3vni_A Xylose isomerase domain 87.6 3.5 0.00012 33.6 9.2 109 42-150 18-152 (294)
49 3u0h_A Xylose isomerase domain 87.4 0.21 7.1E-06 40.4 1.7 88 57-148 4-102 (281)
50 3cqj_A L-ribulose-5-phosphate 87.1 2.7 9.2E-05 34.4 8.3 109 42-150 31-167 (295)
51 2z1k_A (NEO)pullulanase; hydro 87.1 0.73 2.5E-05 41.2 5.2 48 107-154 56-121 (475)
52 2ftp_A Hydroxymethylglutaryl-C 87.0 1 3.5E-05 38.7 5.9 96 42-142 88-200 (302)
53 3m47_A Orotidine 5'-phosphate 86.8 0.58 2E-05 39.0 4.1 36 39-74 23-58 (228)
54 1nvm_A HOA, 4-hydroxy-2-oxoval 86.7 0.46 1.6E-05 41.8 3.6 147 26-191 85-241 (345)
55 4gqr_A Pancreatic alpha-amylas 86.5 0.78 2.7E-05 40.1 4.9 46 104-149 26-96 (496)
56 3aal_A Probable endonuclease 4 86.5 1.3 4.3E-05 36.9 6.1 43 102-144 19-67 (303)
57 3qxb_A Putative xylose isomera 86.5 1.6 5.3E-05 36.5 6.6 47 102-148 36-88 (316)
58 1qop_A Tryptophan synthase alp 86.4 4.4 0.00015 34.1 9.4 101 41-148 31-152 (268)
59 1k77_A EC1530, hypothetical pr 86.1 0.59 2E-05 37.5 3.7 42 102-147 16-57 (260)
60 2nx9_A Oxaloacetate decarboxyl 85.9 1.4 4.7E-05 40.9 6.5 130 44-191 103-248 (464)
61 4aie_A Glucan 1,6-alpha-glucos 85.8 1.1 3.7E-05 40.2 5.6 44 107-150 38-100 (549)
62 3ivs_A Homocitrate synthase, m 85.8 0.86 2.9E-05 41.9 5.0 134 42-190 115-269 (423)
63 1gcy_A Glucan 1,4-alpha-maltot 85.3 1.6 5.6E-05 39.9 6.7 50 106-155 42-118 (527)
64 2g0w_A LMO2234 protein; putati 84.9 0.52 1.8E-05 39.2 2.9 89 57-147 23-122 (296)
65 1g94_A Alpha-amylase; beta-alp 84.9 1.3 4.3E-05 39.6 5.6 50 102-151 16-86 (448)
66 3aam_A Endonuclease IV, endoiv 84.9 2.2 7.4E-05 34.6 6.6 106 42-150 15-140 (270)
67 2hk0_A D-psicose 3-epimerase; 84.8 4.5 0.00015 33.5 8.6 108 42-150 38-171 (309)
68 2wc7_A Alpha amylase, catalyti 84.7 1.1 3.8E-05 40.3 5.2 48 107-154 62-127 (488)
69 2dh2_A 4F2 cell-surface antige 84.6 1.2 4E-05 39.9 5.3 47 104-150 39-102 (424)
70 1geq_A Tryptophan synthase alp 84.6 11 0.00037 30.5 10.7 71 73-150 69-140 (248)
71 1ht6_A AMY1, alpha-amylase iso 84.5 1.1 3.8E-05 39.5 5.0 49 107-155 27-94 (405)
72 1j0h_A Neopullulanase; beta-al 84.5 1.2 4E-05 41.5 5.4 47 107-153 182-246 (588)
73 3dhu_A Alpha-amylase; structur 83.9 1.4 4.8E-05 39.1 5.5 50 106-155 35-109 (449)
74 2aaa_A Alpha-amylase; glycosid 83.6 1.4 4.7E-05 39.7 5.3 49 107-155 49-123 (484)
75 2guy_A Alpha-amylase A; (beta- 83.6 1.6 5.5E-05 39.1 5.7 48 106-153 48-121 (478)
76 3ngf_A AP endonuclease, family 83.5 6.4 0.00022 31.8 8.9 101 42-150 24-151 (269)
77 2zds_A Putative DNA-binding pr 83.4 7.9 0.00027 32.0 9.6 107 42-150 19-180 (340)
78 4aio_A Limit dextrinase; hydro 83.2 1.1 3.7E-05 42.8 4.7 21 102-122 287-307 (884)
79 2qul_A D-tagatose 3-epimerase; 83.2 1.9 6.5E-05 34.9 5.5 108 43-150 19-153 (290)
80 3bh4_A Alpha-amylase; calcium, 83.0 2.3 7.8E-05 38.2 6.5 50 104-153 24-102 (483)
81 1hvx_A Alpha-amylase; hydrolas 82.9 2.2 7.4E-05 38.9 6.4 47 105-151 28-103 (515)
82 1wpc_A Glucan 1,4-alpha-maltoh 82.8 2.3 8E-05 38.1 6.5 49 105-153 29-106 (485)
83 2yb1_A Amidohydrolase; HET: AM 82.8 1.4 4.6E-05 37.6 4.7 68 72-146 173-243 (292)
84 1xim_A D-xylose isomerase; iso 82.7 1.3 4.6E-05 38.8 4.8 48 100-147 32-86 (393)
85 1ud2_A Amylase, alpha-amylase; 82.6 2.4 8.2E-05 38.0 6.5 49 105-153 27-104 (480)
86 1ea9_C Cyclomaltodextrinase; h 82.6 1.6 5.5E-05 40.6 5.5 44 107-150 178-239 (583)
87 1x7f_A Outer surface protein; 82.6 1.2 4.2E-05 40.6 4.5 66 79-152 26-96 (385)
88 1ep3_A Dihydroorotate dehydrog 82.5 6.6 0.00023 32.8 8.8 116 40-164 110-265 (311)
89 3ewb_X 2-isopropylmalate synth 82.3 1.7 5.8E-05 37.5 5.2 127 54-190 94-243 (293)
90 2z6i_A Trans-2-enoyl-ACP reduc 82.3 0.88 3E-05 39.4 3.4 114 42-180 27-143 (332)
91 3qc0_A Sugar isomerase; TIM ba 82.1 2.4 8.1E-05 34.0 5.7 106 42-150 19-143 (275)
92 3d3a_A Beta-galactosidase; pro 82.0 1.7 6E-05 41.6 5.6 52 100-151 36-97 (612)
93 1bxb_A Xylose isomerase; xylos 81.6 1.5 5.3E-05 38.4 4.7 47 101-147 33-86 (387)
94 1i60_A IOLI protein; beta barr 81.4 14 0.00048 29.3 10.0 109 42-150 15-143 (278)
95 1lwj_A 4-alpha-glucanotransfer 81.4 2.4 8.3E-05 37.5 6.0 45 107-151 29-91 (441)
96 3t7v_A Methylornithine synthas 81.2 5.7 0.00019 34.0 8.1 43 104-146 152-204 (350)
97 4aef_A Neopullulanase (alpha-a 81.2 2 6.8E-05 40.3 5.6 46 105-150 243-306 (645)
98 3bg3_A Pyruvate carboxylase, m 80.9 3 0.0001 40.8 6.8 127 52-191 209-352 (718)
99 1wzl_A Alpha-amylase II; pullu 80.8 2 6.9E-05 39.9 5.5 44 107-150 179-240 (585)
100 2cw6_A Hydroxymethylglutaryl-C 80.7 2.1 7.1E-05 36.6 5.1 98 40-142 83-197 (298)
101 3gdb_A Endo-D, putative unchar 80.4 2.2 7.4E-05 43.2 5.8 76 39-121 227-323 (937)
102 2fty_A Dihydropyrimidinase; al 80.2 18 0.0006 33.4 11.5 102 42-150 152-278 (559)
103 3bo9_A Putative nitroalkan dio 80.1 14 0.00047 31.9 10.3 116 42-181 41-158 (326)
104 3vup_A Beta-1,4-mannanase; TIM 80.1 2.4 8.3E-05 33.9 5.1 49 102-150 43-110 (351)
105 2p0o_A Hypothetical protein DU 80.1 1.7 5.8E-05 39.5 4.6 61 83-151 6-71 (372)
106 1f6y_A 5-methyltetrahydrofolat 80.1 15 0.00051 31.2 10.2 100 43-145 31-153 (262)
107 2q02_A Putative cytoplasmic pr 80.0 17 0.00058 28.8 10.1 104 43-150 21-140 (272)
108 1ujp_A Tryptophan synthase alp 79.5 15 0.0005 31.3 10.0 101 41-148 30-149 (271)
109 1xla_A D-xylose isomerase; iso 79.4 1.3 4.6E-05 38.8 3.6 46 102-147 34-86 (394)
110 2e8y_A AMYX protein, pullulana 79.2 1.8 6.2E-05 41.5 4.7 46 105-150 255-336 (718)
111 1m7x_A 1,4-alpha-glucan branch 79.0 4.4 0.00015 38.0 7.1 52 104-155 159-230 (617)
112 1jae_A Alpha-amylase; glycosid 78.9 1.3 4.4E-05 39.9 3.3 54 102-155 24-100 (471)
113 1ua7_A Alpha-amylase; beta-alp 78.9 2.1 7.1E-05 37.9 4.7 50 107-156 23-101 (422)
114 3l23_A Sugar phosphate isomera 78.8 12 0.00041 31.2 9.2 103 42-149 30-165 (303)
115 3sfw_A Dihydropyrimidinase; hy 78.6 18 0.00062 31.8 10.7 96 52-152 144-265 (461)
116 1f76_A Dihydroorotate dehydrog 78.6 11 0.00037 32.3 9.0 118 40-164 152-313 (336)
117 1uuq_A Mannosyl-oligosaccharid 78.6 3.9 0.00013 36.4 6.3 50 101-151 62-132 (440)
118 2whl_A Beta-mannanase, baman5; 78.3 3.7 0.00013 34.1 5.8 43 72-118 33-81 (294)
119 2bhu_A Maltooligosyltrehalose 78.2 2.7 9.4E-05 39.5 5.5 51 105-155 148-218 (602)
120 3f4w_A Putative hexulose 6 pho 78.1 7.9 0.00027 30.5 7.5 110 40-164 66-182 (211)
121 3dx5_A Uncharacterized protein 78.1 7.5 0.00026 31.4 7.5 102 43-149 17-142 (286)
122 2yyu_A Orotidine 5'-phosphate 77.8 2.4 8.1E-05 35.4 4.4 91 39-141 15-106 (246)
123 3aal_A Probable endonuclease 4 77.8 6.4 0.00022 32.5 7.1 100 42-141 19-136 (303)
124 3aie_A Glucosyltransferase-SI; 77.7 3 0.0001 41.5 5.8 49 103-151 635-714 (844)
125 1zja_A Trehalulose synthase; s 77.6 3.4 0.00012 38.0 5.9 49 105-153 36-103 (557)
126 3ff4_A Uncharacterized protein 77.6 2 7E-05 32.6 3.7 43 100-148 68-110 (122)
127 1mxg_A Alpha amylase; hyperthe 77.4 3.8 0.00013 36.5 6.0 47 107-153 34-110 (435)
128 3edf_A FSPCMD, cyclomaltodextr 77.3 4.5 0.00015 37.7 6.6 52 104-155 151-224 (601)
129 1muw_A Xylose isomerase; atomi 77.2 1.7 5.8E-05 38.0 3.5 46 102-147 34-86 (386)
130 3o0f_A Putative metal-dependen 77.1 3.6 0.00012 35.9 5.6 69 72-147 185-257 (301)
131 2p10_A MLL9387 protein; putati 77.1 2.7 9.1E-05 37.1 4.7 69 102-176 109-192 (286)
132 2yx0_A Radical SAM enzyme; pre 76.8 8.6 0.0003 32.7 7.8 79 54-146 142-239 (342)
133 3bdk_A D-mannonate dehydratase 76.7 3.5 0.00012 37.1 5.6 44 104-147 33-81 (386)
134 1dbt_A Orotidine 5'-phosphate 76.7 1.7 5.8E-05 36.0 3.3 92 39-142 14-106 (239)
135 3dc8_A Dihydropyrimidinase; TI 76.7 19 0.00065 32.5 10.5 94 54-152 143-262 (490)
136 1m53_A Isomaltulose synthase; 76.6 3.4 0.00012 38.2 5.5 49 105-153 49-116 (570)
137 2zic_A Dextran glucosidase; TI 76.5 3.2 0.00011 38.2 5.3 48 105-152 35-101 (543)
138 2h6r_A Triosephosphate isomera 76.4 2.8 9.5E-05 34.4 4.4 67 107-178 75-142 (219)
139 3cny_A Inositol catabolism pro 76.3 23 0.0008 28.5 10.0 101 42-150 35-161 (301)
140 4aee_A Alpha amylase, catalyti 76.2 3.4 0.00012 39.3 5.6 46 106-151 270-333 (696)
141 3czg_A Sucrose hydrolase; (alp 76.2 4.1 0.00014 38.6 6.1 48 103-150 108-176 (644)
142 2dsk_A Chitinase; catalytic do 76.2 3.8 0.00013 36.1 5.5 80 67-147 58-145 (311)
143 1hjs_A Beta-1,4-galactanase; 4 76.1 2 6.8E-05 37.5 3.6 60 79-150 15-80 (332)
144 3nco_A Endoglucanase fncel5A; 76.0 5.6 0.00019 33.4 6.3 18 104-121 44-61 (320)
145 1qho_A Alpha-amylase; glycosid 76.0 3.8 0.00013 38.9 5.8 46 107-152 58-130 (686)
146 3eww_A Ompdecase, orotidine-5' 75.8 4.4 0.00015 34.8 5.7 50 39-88 42-91 (260)
147 2w91_A Endo-beta-N-acetylgluco 75.6 3.4 0.00012 40.0 5.4 86 51-142 88-193 (653)
148 2czd_A Orotidine 5'-phosphate 75.5 5.6 0.00019 31.9 6.0 122 25-164 51-180 (208)
149 1ydo_A HMG-COA lyase; TIM-barr 75.1 4.2 0.00014 35.3 5.4 97 41-142 85-198 (307)
150 2gjl_A Hypothetical protein PA 75.1 3.6 0.00012 35.3 5.0 119 42-179 30-150 (328)
151 1gjw_A Maltodextrin glycosyltr 74.9 3.9 0.00013 38.4 5.6 48 103-150 122-202 (637)
152 3jr2_A Hexulose-6-phosphate sy 74.8 9.6 0.00033 30.7 7.3 94 39-147 17-113 (218)
153 1d3c_A Cyclodextrin glycosyltr 74.6 3.6 0.00012 39.0 5.3 50 104-153 58-139 (686)
154 3qja_A IGPS, indole-3-glycerol 74.5 2 6.9E-05 36.8 3.2 72 102-180 122-195 (272)
155 2wan_A Pullulanase; hydrolase, 74.0 4 0.00014 40.5 5.6 48 105-152 473-554 (921)
156 3aj7_A Oligo-1,6-glucosidase; 73.9 4 0.00014 38.1 5.3 48 106-153 45-111 (589)
157 1rqb_A Transcarboxylase 5S sub 73.8 3.9 0.00013 38.7 5.2 128 50-190 127-266 (539)
158 1zco_A 2-dehydro-3-deoxyphosph 73.7 11 0.00039 31.9 7.7 111 24-142 129-258 (262)
159 3bc9_A AMYB, alpha amylase, ca 73.6 5.1 0.00017 37.7 6.0 50 103-152 152-231 (599)
160 1qnr_A Endo-1,4-B-D-mannanase; 73.6 4.8 0.00016 33.6 5.3 50 101-150 36-110 (344)
161 1uok_A Oligo-1,6-glucosidase; 73.5 4.3 0.00015 37.4 5.4 47 107-153 37-102 (558)
162 1eix_A Orotidine 5'-monophosph 73.3 1.2 4.2E-05 37.1 1.5 102 26-144 17-119 (245)
163 4awe_A Endo-beta-D-1,4-mannana 73.3 4.3 0.00015 32.6 4.7 51 100-150 36-121 (387)
164 3gbc_A Pyrazinamidase/nicotina 73.3 3.4 0.00012 32.9 4.1 65 76-147 117-183 (186)
165 1wza_A Alpha-amylase A; hydrol 73.3 4.2 0.00014 36.5 5.1 47 106-152 32-104 (488)
166 3g3d_A UMP synthase, uridine 5 73.1 5.4 0.00018 35.3 5.7 49 39-87 94-142 (312)
167 1ji1_A Alpha-amylase I; beta/a 73.1 4.2 0.00014 38.2 5.2 44 107-150 197-263 (637)
168 1bqc_A Protein (beta-mannanase 73.0 4.9 0.00017 33.4 5.2 17 102-118 66-82 (302)
169 3hm7_A Allantoinase; metallo-d 73.0 39 0.0013 29.2 11.2 80 67-151 166-269 (448)
170 3gr7_A NADPH dehydrogenase; fl 72.9 1.7 6E-05 38.1 2.5 70 71-142 196-275 (340)
171 3c8f_A Pyruvate formate-lyase 72.7 2.1 7.3E-05 33.6 2.7 105 33-144 78-192 (245)
172 2a5h_A L-lysine 2,3-aminomutas 72.7 17 0.0006 32.4 9.1 44 39-82 146-191 (416)
173 3aml_A OS06G0726400 protein; s 72.7 4.7 0.00016 39.3 5.7 49 106-154 207-275 (755)
174 1edg_A Endoglucanase A; family 72.6 6.2 0.00021 34.2 5.9 58 92-150 53-121 (380)
175 2ze0_A Alpha-glucosidase; TIM 72.6 5.5 0.00019 36.6 5.9 49 105-153 35-102 (555)
176 1g5a_A Amylosucrase; glycosylt 72.6 4.3 0.00015 38.3 5.2 48 103-150 115-183 (628)
177 3bmv_A Cyclomaltodextrin gluca 72.4 4.4 0.00015 38.4 5.3 51 103-153 57-140 (683)
178 4e8d_A Glycosyl hydrolase, fam 72.3 6.1 0.00021 38.0 6.2 50 100-149 31-90 (595)
179 2c0h_A Mannan endo-1,4-beta-ma 71.7 4.4 0.00015 34.0 4.6 49 102-150 46-111 (353)
180 1fob_A Beta-1,4-galactanase; B 71.6 3.4 0.00012 35.9 4.0 45 104-150 30-80 (334)
181 1qtw_A Endonuclease IV; DNA re 71.5 37 0.0013 27.1 10.8 81 69-149 46-145 (285)
182 3gdm_A Orotidine 5'-phosphate 71.5 5.7 0.0002 34.2 5.4 49 39-87 40-89 (267)
183 2qw5_A Xylose isomerase-like T 71.5 17 0.00059 30.3 8.3 76 45-121 35-128 (335)
184 3cz8_A Putative sporulation-sp 71.5 9.9 0.00034 32.4 6.9 50 74-124 57-121 (319)
185 1olt_A Oxygen-independent copr 71.3 8.6 0.00029 34.6 6.7 104 39-145 119-235 (457)
186 3obe_A Sugar phosphate isomera 71.0 28 0.00096 29.0 9.5 104 42-149 37-169 (305)
187 3a24_A Alpha-galactosidase; gl 71.0 5.3 0.00018 38.7 5.5 46 101-146 309-363 (641)
188 1rh9_A Endo-beta-mannanase; en 70.8 8.9 0.0003 32.6 6.4 51 100-150 41-105 (373)
189 1gkr_A Hydantoinase, non-ATP d 70.5 50 0.0017 28.1 12.2 90 54-148 143-261 (458)
190 3vgf_A Malto-oligosyltrehalose 70.4 7.4 0.00025 36.0 6.2 51 105-155 123-193 (558)
191 3gk0_A PNP synthase, pyridoxin 70.0 6.7 0.00023 34.5 5.5 77 66-152 138-223 (278)
192 3icg_A Endoglucanase D; cellul 69.9 4.1 0.00014 37.2 4.4 52 99-150 43-106 (515)
193 2wsk_A Glycogen debranching en 69.9 5.5 0.00019 37.7 5.4 50 106-155 184-267 (657)
194 1w0m_A TIM, triosephosphate is 69.4 7.9 0.00027 32.5 5.7 67 107-178 78-145 (226)
195 1bf2_A Isoamylase; hydrolase, 69.4 7 0.00024 37.8 6.0 48 107-154 211-297 (750)
196 2qf7_A Pyruvate carboxylase pr 69.3 9.7 0.00033 39.0 7.3 125 53-190 658-798 (1165)
197 3zss_A Putative glucanohydrola 69.2 7.3 0.00025 37.7 6.1 51 103-153 255-344 (695)
198 3civ_A Endo-beta-1,4-mannanase 69.2 9.4 0.00032 33.5 6.4 45 104-148 56-115 (343)
199 3ttq_A Dextransucrase; (beta/a 69.0 6 0.00021 40.7 5.6 51 103-153 855-936 (1108)
200 1tz9_A Mannonate dehydratase; 68.7 7.1 0.00024 33.7 5.4 43 105-147 25-72 (367)
201 1h1y_A D-ribulose-5-phosphate 68.7 12 0.00042 30.3 6.6 89 104-200 77-187 (228)
202 1tqj_A Ribulose-phosphate 3-ep 68.3 18 0.00061 29.7 7.6 88 104-200 75-187 (230)
203 2vr5_A Glycogen operon protein 68.2 6.5 0.00022 37.8 5.5 50 106-155 207-292 (718)
204 3thd_A Beta-galactosidase; TIM 68.0 8.2 0.00028 37.5 6.1 51 100-150 39-99 (654)
205 3rmj_A 2-isopropylmalate synth 68.0 4.4 0.00015 36.2 4.0 127 54-190 101-250 (370)
206 3o6c_A PNP synthase, pyridoxin 67.9 6.1 0.00021 34.4 4.7 46 68-123 109-154 (260)
207 1cyg_A Cyclodextrin glucanotra 67.6 5.6 0.00019 37.6 4.8 51 103-153 54-135 (680)
208 2yfo_A Alpha-galactosidase-suc 67.2 8.6 0.00029 37.3 6.1 57 90-146 335-408 (720)
209 3aof_A Endoglucanase; glycosyl 67.2 9.6 0.00033 31.6 5.7 16 103-118 76-91 (317)
210 3jug_A Beta-mannanase; TIM-bar 67.0 11 0.00036 33.2 6.2 43 72-118 56-104 (345)
211 1hg3_A Triosephosphate isomera 67.0 7.5 0.00026 32.6 5.0 67 107-178 81-148 (225)
212 3n3m_A Orotidine 5'-phosphate 66.7 6.4 0.00022 35.3 4.8 73 44-121 107-184 (342)
213 3qw3_A Orotidine-5-phosphate d 66.7 3.6 0.00012 35.0 3.1 91 26-122 16-112 (255)
214 3zwt_A Dihydroorotate dehydrog 66.6 39 0.0013 30.0 9.9 77 42-127 162-260 (367)
215 3klk_A Glucansucrase; native f 66.2 8.3 0.00028 39.4 6.0 47 107-153 692-769 (1039)
216 1tg7_A Beta-galactosidase; TIM 66.2 5.9 0.0002 40.1 4.9 51 101-151 36-96 (971)
217 3mi6_A Alpha-galactosidase; NE 65.8 17 0.00057 35.8 7.9 56 90-146 336-409 (745)
218 3k1d_A 1,4-alpha-glucan-branch 65.7 10 0.00035 36.9 6.4 50 105-154 268-337 (722)
219 1im5_A 180AA long hypothetical 65.7 6.3 0.00021 30.8 4.1 64 77-147 113-178 (180)
220 1yht_A DSPB; beta barrel, hydr 65.5 11 0.00039 33.3 6.2 74 66-152 29-117 (367)
221 1ece_A Endocellulase E1; glyco 65.4 7.1 0.00024 33.0 4.7 50 102-151 45-116 (358)
222 1k77_A EC1530, hypothetical pr 65.4 26 0.00089 27.6 7.8 102 42-150 19-144 (260)
223 1z41_A YQJM, probable NADH-dep 65.4 2.5 8.7E-05 36.7 1.9 75 70-146 195-280 (338)
224 3v8e_A Nicotinamidase; hydrola 65.4 4.7 0.00016 32.9 3.4 63 78-147 148-214 (216)
225 4hty_A Cellulase; (alpha/beta) 65.1 9.9 0.00034 32.8 5.6 67 83-150 64-141 (359)
226 2ya0_A Putative alkaline amylo 64.9 9.2 0.00032 36.5 5.8 24 129-152 254-277 (714)
227 1iv8_A Maltooligosyl trehalose 64.6 6.8 0.00023 38.4 4.9 48 106-153 22-89 (720)
228 3pzg_A Mannan endo-1,4-beta-ma 64.4 11 0.00037 33.8 5.9 51 101-151 43-121 (383)
229 1uas_A Alpha-galactosidase; TI 64.4 9.6 0.00033 33.3 5.4 45 101-146 26-90 (362)
230 2yv2_A Succinyl-COA synthetase 64.2 11 0.00038 32.3 5.7 46 99-147 80-126 (297)
231 2ztj_A Homocitrate synthase; ( 64.0 7.1 0.00024 34.8 4.6 134 43-190 80-235 (382)
232 3dxi_A Putative aldolase; TIM 63.9 8 0.00027 34.0 4.8 131 42-190 89-232 (320)
233 3l5l_A Xenobiotic reductase A; 63.6 4.5 0.00016 35.6 3.2 71 70-142 209-293 (363)
234 2xn2_A Alpha-galactosidase; hy 63.4 10 0.00035 36.8 5.8 57 90-146 339-412 (732)
235 3ucq_A Amylosucrase; thermosta 63.3 9.1 0.00031 36.3 5.4 52 103-154 113-185 (655)
236 2qt3_A N-isopropylammelide iso 63.2 42 0.0014 28.0 9.1 77 67-148 195-277 (403)
237 3m6y_A 4-hydroxy-2-oxoglutarat 63.1 23 0.0008 30.9 7.5 126 3-151 97-244 (275)
238 2yv1_A Succinyl-COA ligase [AD 62.9 9 0.00031 32.8 4.9 62 82-147 54-125 (294)
239 3ebv_A Chinitase A; chitinase 62.6 19 0.00063 31.1 6.8 72 68-142 60-139 (302)
240 2y8v_A CHIC, class III chitina 62.3 24 0.00083 29.8 7.4 70 71-142 73-152 (290)
241 4dbe_A Orotidine 5'-phosphate 61.7 19 0.00065 29.8 6.5 136 25-188 52-197 (222)
242 3ayv_A Putative uncharacterize 61.5 8.6 0.00029 30.6 4.2 19 102-121 11-29 (254)
243 1kwg_A Beta-galactosidase; TIM 61.4 8.1 0.00028 36.3 4.7 47 101-149 14-70 (645)
244 1jub_A Dihydroorotate dehydrog 61.2 41 0.0014 28.2 8.7 89 68-164 142-266 (311)
245 3m0z_A Putative aldolase; MCSG 61.0 31 0.0011 29.8 7.8 104 38-151 100-221 (249)
246 2g0w_A LMO2234 protein; putati 60.7 24 0.00081 29.0 6.9 104 42-150 37-155 (296)
247 3og2_A Beta-galactosidase; TIM 60.6 8.3 0.00028 39.3 4.8 50 100-149 55-114 (1003)
248 3k8k_A Alpha-amylase, SUSG; al 60.5 11 0.00037 36.1 5.4 47 107-153 66-130 (669)
249 1wky_A Endo-beta-1,4-mannanase 60.0 14 0.00048 33.5 5.8 43 72-118 41-89 (464)
250 2j6v_A UV endonuclease, UVDE; 59.8 47 0.0016 28.4 8.9 85 41-125 61-168 (301)
251 1yx1_A Hypothetical protein PA 59.7 9.3 0.00032 30.8 4.2 91 54-149 37-131 (264)
252 3r2j_A Alpha/beta-hydrolase-li 59.6 6.4 0.00022 32.6 3.2 64 78-148 151-216 (227)
253 3ndz_A Endoglucanase D; cellot 59.5 16 0.00055 31.4 5.9 49 100-148 41-101 (345)
254 3qr3_A Endoglucanase EG-II; TI 59.5 12 0.0004 32.8 5.1 50 99-148 41-102 (340)
255 3u0h_A Xylose isomerase domain 59.4 41 0.0014 26.6 8.0 109 42-150 17-142 (281)
256 3m07_A Putative alpha amylase; 59.2 12 0.0004 35.5 5.3 50 106-155 159-228 (618)
257 2fli_A Ribulose-phosphate 3-ep 59.0 36 0.0012 26.7 7.5 41 104-148 74-114 (220)
258 3hbl_A Pyruvate carboxylase; T 58.9 13 0.00045 38.0 5.9 146 32-191 619-782 (1150)
259 1vjz_A Endoglucanase; TM1752, 58.7 9.9 0.00034 32.1 4.4 50 101-150 36-97 (341)
260 1ceo_A Cellulase CELC; glycosy 58.7 8.9 0.0003 32.2 4.0 49 102-150 29-89 (343)
261 3ctl_A D-allulose-6-phosphate 58.5 19 0.00065 29.9 6.0 89 104-200 70-181 (231)
262 3noy_A 4-hydroxy-3-methylbut-2 58.4 11 0.00039 34.2 4.9 92 26-127 85-189 (366)
263 2ya1_A Putative alkaline amylo 58.3 12 0.00041 37.7 5.4 23 129-151 561-583 (1014)
264 3inp_A D-ribulose-phosphate 3- 58.0 39 0.0013 28.5 8.0 41 103-147 98-138 (246)
265 3n9r_A Fructose-bisphosphate a 57.5 22 0.00074 31.4 6.4 106 39-156 26-141 (307)
266 3a5v_A Alpha-galactosidase; be 57.3 15 0.00051 32.8 5.4 45 101-146 26-90 (397)
267 2epl_X N-acetyl-beta-D-glucosa 57.1 16 0.00056 34.9 6.0 27 126-152 141-167 (627)
268 3can_A Pyruvate-formate lyase- 57.1 7.7 0.00026 29.7 3.1 95 52-147 53-179 (182)
269 2nu8_A Succinyl-COA ligase [AD 57.1 18 0.00061 30.8 5.7 45 100-147 74-119 (288)
270 3u7v_A Beta-galactosidase; str 57.0 14 0.00047 35.3 5.4 46 102-149 74-128 (552)
271 2x7v_A Probable endonuclease 4 56.9 40 0.0014 26.8 7.6 57 69-125 46-113 (287)
272 3m47_A Orotidine 5'-phosphate 56.9 13 0.00045 30.7 4.7 136 25-188 64-212 (228)
273 2j6v_A UV endonuclease, UVDE; 56.6 16 0.00053 31.4 5.3 50 97-146 57-119 (301)
274 1szn_A Alpha-galactosidase; (b 56.6 17 0.00058 32.7 5.8 45 101-146 29-93 (417)
275 3hu5_A Isochorismatase family 56.5 9.1 0.00031 30.7 3.6 80 56-148 104-185 (204)
276 3tty_A Beta-GAL, beta-galactos 56.5 14 0.0005 35.2 5.5 44 102-147 24-77 (675)
277 3bdk_A D-mannonate dehydratase 56.4 76 0.0026 28.3 10.0 54 67-120 61-123 (386)
278 3faw_A Reticulocyte binding pr 56.2 15 0.0005 36.6 5.7 27 129-155 369-395 (877)
279 3ayv_A Putative uncharacterize 56.2 43 0.0015 26.4 7.6 48 102-149 77-136 (254)
280 1vs1_A 3-deoxy-7-phosphoheptul 55.9 37 0.0013 29.1 7.6 114 24-142 144-273 (276)
281 3fnd_A Chitinase; TIM-barrel, 55.8 25 0.00086 29.8 6.5 71 70-141 52-132 (312)
282 3l52_A Orotidine 5'-phosphate 55.2 9.9 0.00034 33.1 3.8 116 26-149 25-160 (284)
283 3hgj_A Chromate reductase; TIM 55.0 5.3 0.00018 35.0 2.1 70 71-142 204-286 (349)
284 1xla_A D-xylose isomerase; iso 55.0 18 0.00061 31.6 5.5 70 72-146 35-132 (394)
285 2czd_A Orotidine 5'-phosphate 54.8 22 0.00074 28.3 5.6 97 39-151 10-109 (208)
286 1oi7_A Succinyl-COA synthetase 54.5 15 0.00052 31.3 4.9 45 100-147 74-119 (288)
287 3can_A Pyruvate-formate lyase- 54.1 60 0.002 24.5 7.8 13 130-142 110-122 (182)
288 2yci_X 5-methyltetrahydrofolat 54.1 81 0.0028 26.8 9.4 101 54-154 48-174 (271)
289 3gnh_A L-lysine, L-arginine ca 54.1 94 0.0032 25.8 10.3 81 51-149 178-268 (403)
290 1a0c_A Xylose isomerase; ketol 54.0 11 0.00036 34.4 3.9 50 95-146 76-136 (438)
291 1x7f_A Outer surface protein; 53.7 8.6 0.00029 35.0 3.3 85 32-125 29-127 (385)
292 1vhn_A Putative flavin oxidore 53.0 49 0.0017 28.1 7.9 100 39-147 69-187 (318)
293 3vk5_A MOEO5; TIM barrel, tran 53.0 34 0.0012 30.0 6.9 46 103-150 55-104 (286)
294 1rqb_A Transcarboxylase 5S sub 53.0 53 0.0018 30.9 8.7 91 44-147 53-161 (539)
295 3qok_A Putative chitinase II; 52.9 19 0.00066 31.8 5.4 48 73-121 96-154 (420)
296 1m65_A Hypothetical protein YC 52.7 5.3 0.00018 31.9 1.6 48 72-121 173-220 (245)
297 1dos_A Aldolase class II; lyas 52.6 22 0.00076 31.9 5.8 113 39-157 38-182 (358)
298 3b0p_A TRNA-dihydrouridine syn 52.5 8.6 0.0003 33.7 3.0 74 100-178 69-168 (350)
299 3ayr_A Endoglucanase; TIM barr 52.4 28 0.00095 30.0 6.3 49 102-150 63-123 (376)
300 3o94_A Nicotinamidase; hydrola 52.4 14 0.00047 30.3 4.1 80 56-148 121-203 (211)
301 3q58_A N-acetylmannosamine-6-p 52.4 31 0.0011 28.4 6.3 106 42-164 93-205 (229)
302 1ur4_A Galactanase; hydrolase, 52.2 23 0.00079 31.9 5.9 45 104-150 51-109 (399)
303 3a24_A Alpha-galactosidase; gl 52.2 36 0.0012 32.9 7.5 103 67-181 344-451 (641)
304 1now_A Beta-hexosaminidase bet 52.2 24 0.00082 32.8 6.1 27 126-152 216-242 (507)
305 1h1n_A Endo type cellulase ENG 51.7 16 0.00054 30.6 4.4 45 104-148 34-90 (305)
306 1i4n_A Indole-3-glycerol phosp 51.4 15 0.00052 31.2 4.3 67 107-180 116-184 (251)
307 3k13_A 5-methyltetrahydrofolat 51.3 92 0.0031 27.0 9.4 99 44-145 44-171 (300)
308 1yac_A Ycacgp, YCAC gene produ 51.3 9.3 0.00032 30.9 2.8 65 77-148 98-164 (208)
309 3r89_A Orotidine 5'-phosphate 50.9 12 0.00042 32.6 3.7 74 43-121 49-128 (290)
310 1rpx_A Protein (ribulose-phosp 50.7 56 0.0019 26.0 7.4 88 103-199 80-192 (230)
311 3iix_A Biotin synthetase, puta 50.2 20 0.00068 30.2 4.9 70 67-146 84-155 (348)
312 1tvn_A Cellulase, endoglucanas 50.1 35 0.0012 28.0 6.2 17 102-118 80-96 (293)
313 1jub_A Dihydroorotate dehydrog 49.9 25 0.00087 29.5 5.5 41 102-142 107-156 (311)
314 1wdp_A Beta-amylase; (beta/alp 49.2 23 0.00078 33.5 5.4 48 101-148 33-88 (495)
315 1gvf_A Tagatose-bisphosphate a 49.0 73 0.0025 27.6 8.4 107 39-155 27-140 (286)
316 2gjx_A Beta-hexosaminidase alp 48.5 33 0.0011 31.8 6.4 27 126-152 211-237 (507)
317 3b0p_A TRNA-dihydrouridine syn 48.4 28 0.00097 30.3 5.7 111 40-154 69-208 (350)
318 1wa3_A 2-keto-3-deoxy-6-phosph 48.4 93 0.0032 24.1 8.7 99 40-173 73-177 (205)
319 2ffc_A Orotidine 5-monophospha 48.3 22 0.00077 31.8 5.1 49 40-88 115-166 (353)
320 1h4p_A Glucan 1,3-beta-glucosi 48.2 20 0.00067 31.9 4.7 47 104-150 76-134 (408)
321 3n9k_A Glucan 1,3-beta-glucosi 48.2 20 0.00067 32.1 4.7 47 104-150 76-133 (399)
322 2ftp_A Hydroxymethylglutaryl-C 48.1 20 0.00067 30.6 4.5 52 104-155 86-149 (302)
323 1fa2_A Beta-amylase; TIM barre 48.0 23 0.0008 33.4 5.3 49 100-148 33-89 (498)
324 1goi_A Chitinase B; chitin deg 47.9 57 0.0019 29.7 7.9 52 71-122 74-143 (499)
325 3qja_A IGPS, indole-3-glycerol 47.9 28 0.00094 29.7 5.4 85 68-164 147-237 (272)
326 3ian_A Chitinase; structural g 47.8 16 0.00056 31.5 4.0 52 69-122 65-123 (321)
327 1m5w_A Pyridoxal phosphate bio 47.6 25 0.00086 30.2 5.1 76 67-152 111-195 (243)
328 2wt9_A Nicotinamidase; hydrola 47.5 16 0.00056 29.9 3.8 65 77-148 160-227 (235)
329 2yx0_A Radical SAM enzyme; pre 47.4 28 0.00095 29.5 5.4 46 72-120 225-271 (342)
330 3ovp_A Ribulose-phosphate 3-ep 47.1 43 0.0015 27.5 6.4 87 104-199 77-182 (228)
331 2osx_A Endoglycoceramidase II; 46.8 17 0.00057 32.7 4.0 50 101-150 65-125 (481)
332 4ekj_A Beta-xylosidase; TIM-ba 46.8 19 0.00065 31.8 4.4 49 104-152 45-106 (500)
333 1nf9_A Phenazine biosynthesis 46.8 16 0.00055 29.1 3.6 79 56-147 120-200 (207)
334 3ru6_A Orotidine 5'-phosphate 46.7 35 0.0012 29.9 6.0 93 39-143 35-129 (303)
335 4fnq_A Alpha-galactosidase AGA 46.7 30 0.001 33.4 6.0 46 100-146 345-408 (729)
336 1q6o_A Humps, 3-keto-L-gulonat 46.5 37 0.0013 27.0 5.8 97 69-187 92-200 (216)
337 2fhf_A Pullulanase; multiple d 46.3 27 0.00093 35.6 5.9 20 102-121 458-477 (1083)
338 2l69_A Rossmann 2X3 fold prote 46.3 29 0.00098 26.5 4.6 90 39-142 14-124 (134)
339 2jep_A Xyloglucanase; family 5 46.2 38 0.0013 29.1 6.1 48 102-149 70-129 (395)
340 3qm3_A Fructose-bisphosphate a 46.2 27 0.00092 31.4 5.3 77 76-156 92-179 (357)
341 4fo4_A Inosine 5'-monophosphat 46.1 42 0.0014 29.9 6.5 89 67-173 79-176 (366)
342 3hv8_A Protein FIMX; EAL phosp 46.0 35 0.0012 27.7 5.6 91 64-155 114-233 (268)
343 3igs_A N-acetylmannosamine-6-p 45.8 41 0.0014 27.7 6.0 106 42-164 93-205 (232)
344 3kzs_A Glycosyl hydrolase fami 45.8 14 0.00046 34.4 3.3 65 82-146 31-123 (463)
345 1vem_A Beta-amylase; beta-alph 45.6 20 0.00069 33.3 4.5 46 101-148 29-84 (516)
346 1rvg_A Fructose-1,6-bisphospha 45.3 38 0.0013 29.8 6.0 105 39-157 26-140 (305)
347 2ekc_A AQ_1548, tryptophan syn 45.2 27 0.00094 29.1 4.9 85 70-164 134-229 (262)
348 4axn_A Chitinase C1; hydrolase 45.1 11 0.00038 32.1 2.5 54 68-121 81-139 (328)
349 1v77_A PH1877P, hypothetical p 44.8 55 0.0019 26.3 6.6 42 103-144 149-190 (212)
350 3tr2_A Orotidine 5'-phosphate 44.6 12 0.0004 31.5 2.5 46 39-88 19-64 (239)
351 3civ_A Endo-beta-1,4-mannanase 44.5 1E+02 0.0035 26.8 8.7 72 68-142 95-195 (343)
352 3qxb_A Putative xylose isomera 44.4 58 0.002 26.8 6.8 81 71-151 115-215 (316)
353 1m65_A Hypothetical protein YC 44.3 26 0.0009 27.8 4.5 69 71-146 113-187 (245)
354 2bas_A YKUI protein; EAL domai 44.2 19 0.00067 32.0 4.0 102 43-154 129-237 (431)
355 1j2r_A Hypothetical isochorism 44.2 12 0.0004 29.6 2.3 79 56-147 110-190 (199)
356 1zy9_A Alpha-galactosidase; TM 44.1 27 0.00094 32.8 5.2 44 101-146 212-266 (564)
357 3q94_A Fructose-bisphosphate a 44.1 67 0.0023 27.9 7.3 107 39-157 30-148 (288)
358 1edt_A Endo-beta-N-acetylgluco 44.0 42 0.0015 28.2 6.0 68 73-142 73-159 (271)
359 3s83_A Ggdef family protein; s 43.7 21 0.00072 28.8 3.9 87 63-149 99-215 (259)
360 3a21_A Putative secreted alpha 43.7 30 0.001 32.4 5.4 45 101-146 29-93 (614)
361 2fds_A Orotidine-monophosphate 43.5 35 0.0012 30.5 5.6 47 42-88 107-156 (352)
362 1ep3_A Dihydroorotate dehydrog 43.5 11 0.00036 31.5 2.1 45 102-146 112-167 (311)
363 3o1n_A 3-dehydroquinate dehydr 43.4 17 0.00058 31.2 3.4 72 51-138 134-211 (276)
364 1jak_A Beta-N-acetylhexosamini 43.3 38 0.0013 31.5 6.0 26 126-151 227-252 (512)
365 3jr2_A Hexulose-6-phosphate sy 43.2 1.2E+02 0.0042 24.0 9.9 82 69-164 95-189 (218)
366 2xfr_A Beta-amylase; hydrolase 43.2 32 0.0011 32.8 5.4 47 101-147 31-85 (535)
367 3l55_A B-1,4-endoglucanase/cel 43.0 28 0.00094 30.4 4.8 57 92-149 44-110 (353)
368 1tv5_A Dhodehase, dihydroorota 43.0 1.2E+02 0.004 27.7 9.1 24 102-125 312-335 (443)
369 3bxw_B Chitinase domain-contai 42.9 59 0.002 28.7 7.0 76 45-121 94-192 (393)
370 3pjx_A Cyclic dimeric GMP bind 42.9 43 0.0015 29.1 6.0 97 43-153 296-402 (430)
371 3mpg_A Dihydroorotase, dhoase; 42.9 65 0.0022 27.6 7.1 82 64-150 153-255 (428)
372 3hje_A 704AA long hypothetical 42.3 24 0.00082 34.6 4.6 49 106-154 20-88 (704)
373 1gkp_A Hydantoinase; hydrolase 42.2 1.6E+02 0.0054 25.0 10.9 77 66-147 159-259 (458)
374 2r6o_A Putative diguanylate cy 42.1 21 0.00073 30.1 3.8 74 63-149 156-239 (294)
375 3ktc_A Xylose isomerase; putat 42.1 68 0.0023 26.7 7.0 79 42-123 34-129 (333)
376 2yxo_A Histidinol phosphatase; 42.0 42 0.0014 26.9 5.4 50 99-148 14-77 (267)
377 2yxo_A Histidinol phosphatase; 41.6 19 0.00066 28.9 3.3 44 102-146 173-219 (267)
378 1gte_A Dihydropyrimidine dehyd 41.6 58 0.002 32.3 7.3 78 40-124 647-738 (1025)
379 3n12_A Chitinase A, chinctu2; 41.4 28 0.00096 30.1 4.5 54 69-122 58-117 (333)
380 3qho_A Endoglucanase, 458AA lo 41.2 38 0.0013 30.8 5.5 48 102-149 85-153 (458)
381 1aj0_A DHPS, dihydropteroate s 40.6 1.7E+02 0.0059 25.0 9.4 105 52-156 50-192 (282)
382 1r30_A Biotin synthase; SAM ra 40.5 38 0.0013 29.1 5.2 71 67-145 99-171 (369)
383 2pi6_A Chitinase-3-like protei 40.5 63 0.0022 27.8 6.7 50 72-122 56-118 (361)
384 1ydn_A Hydroxymethylglutaryl-C 40.3 33 0.0011 28.8 4.7 50 105-154 83-144 (295)
385 2yl6_A Beta-N-acetylhexosamini 40.2 39 0.0013 30.5 5.4 27 126-152 88-114 (434)
386 3ldv_A Orotidine 5'-phosphate 40.1 61 0.0021 27.5 6.3 69 103-188 164-244 (255)
387 1eep_A Inosine 5'-monophosphat 40.0 42 0.0015 29.5 5.5 71 102-180 153-227 (404)
388 1rrm_A Lactaldehyde reductase; 39.8 83 0.0029 27.3 7.4 58 84-146 34-91 (386)
389 2r8c_A Putative amidohydrolase 39.7 1.7E+02 0.0059 24.7 10.0 90 41-150 176-277 (426)
390 3nvt_A 3-deoxy-D-arabino-heptu 39.7 1.2E+02 0.0042 27.1 8.6 111 23-142 247-377 (385)
391 3r2g_A Inosine 5'-monophosphat 39.7 30 0.001 30.9 4.5 63 102-173 100-168 (361)
392 1ll7_A Chitinase 1; beta-alpha 39.5 85 0.0029 27.4 7.4 50 71-121 73-134 (392)
393 4ac1_X Endo-N-acetyl-beta-D-gl 39.3 84 0.0029 26.5 7.1 70 71-141 63-144 (283)
394 1w9p_A Chitinase; peptide inhi 39.3 83 0.0029 28.1 7.4 49 72-121 115-175 (433)
395 2fp4_A Succinyl-COA ligase [GD 39.2 36 0.0012 29.3 4.8 62 82-147 55-127 (305)
396 3tr2_A Orotidine 5'-phosphate 39.2 1.2E+02 0.0041 25.2 7.9 141 25-188 59-226 (239)
397 3gnh_A L-lysine, L-arginine ca 39.2 54 0.0019 27.3 5.8 48 102-149 168-226 (403)
398 2z2u_A UPF0026 protein MJ0257; 39.0 84 0.0029 25.9 7.0 75 54-146 128-218 (311)
399 3qy7_A Tyrosine-protein phosph 38.9 73 0.0025 26.6 6.6 39 99-137 15-60 (262)
400 1egz_A Endoglucanase Z, EGZ, C 38.8 67 0.0023 26.2 6.3 17 102-118 78-94 (291)
401 3ldv_A Orotidine 5'-phosphate 38.7 14 0.00048 31.5 2.1 91 39-141 38-129 (255)
402 3cu2_A Ribulose-5-phosphate 3- 38.7 51 0.0017 27.5 5.6 87 104-199 82-200 (237)
403 3q58_A N-acetylmannosamine-6-p 37.9 34 0.0012 28.2 4.3 63 106-174 93-156 (229)
404 2p0o_A Hypothetical protein DU 37.9 22 0.00074 32.2 3.3 77 41-125 17-103 (372)
405 3ot4_A Putative isochorismatas 37.8 27 0.00091 29.0 3.7 65 77-148 152-218 (236)
406 2vm8_A Dihydropyrimidinase-rel 37.8 2E+02 0.007 25.0 10.6 88 54-146 172-285 (501)
407 3tfx_A Orotidine 5'-phosphate 37.7 22 0.00074 30.4 3.1 45 39-87 15-60 (259)
408 1jcn_A Inosine monophosphate d 37.5 1.5E+02 0.005 26.9 8.9 105 42-164 259-382 (514)
409 3fvv_A Uncharacterized protein 37.4 93 0.0032 23.5 6.5 93 66-173 93-203 (232)
410 1yzv_A Hypothetical protein; s 37.3 18 0.00063 29.2 2.5 66 76-148 102-172 (204)
411 4f3h_A Fimxeal, putative uncha 37.3 14 0.00049 29.7 1.9 91 59-149 99-219 (250)
412 1vpy_A Protein (hypothetical p 37.3 8.5 0.00029 33.2 0.5 67 74-146 4-73 (289)
413 3pm6_A Putative fructose-bisph 37.0 1E+02 0.0035 27.1 7.4 114 39-156 36-157 (306)
414 3tak_A DHDPS, dihydrodipicolin 36.5 50 0.0017 27.9 5.2 40 102-141 23-65 (291)
415 2fq1_A Isochorismatase; ENTB, 36.5 28 0.00094 29.2 3.6 80 56-148 123-204 (287)
416 2d73_A Alpha-glucosidase SUSB; 36.4 45 0.0015 32.9 5.5 46 101-146 371-434 (738)
417 1sfl_A 3-dehydroquinate dehydr 36.3 15 0.00052 30.5 1.9 64 68-140 110-179 (238)
418 2cks_A Endoglucanase E-5; carb 36.1 51 0.0017 27.3 5.2 17 102-118 81-97 (306)
419 1uhv_A Beta-xylosidase; family 36.0 28 0.00096 31.1 3.7 50 102-151 34-101 (500)
420 4e38_A Keto-hydroxyglutarate-a 35.9 50 0.0017 27.7 5.1 74 72-164 116-197 (232)
421 2e6f_A Dihydroorotate dehydrog 35.9 25 0.00087 29.5 3.3 41 102-142 107-158 (314)
422 3e74_A Allantoinase; (beta/alp 35.8 1.5E+02 0.0051 26.3 8.5 81 67-152 184-288 (473)
423 3alf_A Chitinase, class V; hyd 35.8 84 0.0029 27.0 6.7 51 71-122 51-115 (353)
424 1vf8_A YM1, secretory protein; 35.7 68 0.0023 27.9 6.1 20 102-121 98-117 (377)
425 3b4u_A Dihydrodipicolinate syn 35.5 62 0.0021 27.4 5.7 41 102-142 25-68 (294)
426 2fcj_A Small toprim domain pro 35.4 1.1E+02 0.0036 23.3 6.4 99 40-151 13-113 (119)
427 2zvr_A Uncharacterized protein 35.4 1.6E+02 0.0054 23.6 8.0 85 57-148 21-131 (290)
428 2e6f_A Dihydroorotate dehydrog 35.4 82 0.0028 26.3 6.4 102 56-164 125-268 (314)
429 3vup_A Beta-1,4-mannanase; TIM 35.3 19 0.00065 28.5 2.3 47 68-118 40-107 (351)
430 1qwg_A PSL synthase;, (2R)-pho 35.2 90 0.0031 26.8 6.6 70 71-145 86-163 (251)
431 3fy1_A Amcase, TSA1902, acidic 35.0 1E+02 0.0034 27.1 7.1 48 73-121 56-117 (395)
432 3txy_A Isochorismatase family 35.0 21 0.00072 28.4 2.5 79 56-147 104-184 (199)
433 3kru_A NADH:flavin oxidoreduct 34.9 15 0.00053 32.2 1.8 72 68-142 192-275 (343)
434 3tsm_A IGPS, indole-3-glycerol 34.9 63 0.0022 27.6 5.6 68 107-181 135-203 (272)
435 3cmg_A Putative beta-galactosi 34.8 32 0.0011 32.4 4.1 89 50-151 252-348 (667)
436 3aqu_A AT4G19810; stress respo 34.4 93 0.0032 26.8 6.7 65 70-136 51-129 (356)
437 2nx9_A Oxaloacetate decarboxyl 34.4 70 0.0024 29.4 6.2 97 44-148 36-145 (464)
438 1b0n_B Protein (SINI protein); 34.2 22 0.00076 24.0 2.1 19 128-146 11-29 (57)
439 3tg2_A Vibriobactin-specific i 34.2 26 0.00089 28.7 3.0 63 77-146 131-195 (223)
440 3hvb_A Protein FIMX; EAL phosp 34.1 58 0.002 28.3 5.4 92 63-155 282-402 (437)
441 3l3e_A DNA topoisomerase 2-bin 34.0 41 0.0014 23.9 3.7 74 23-99 16-92 (107)
442 7a3h_A Endoglucanase; hydrolas 33.9 74 0.0025 26.4 5.9 17 102-118 81-97 (303)
443 3kru_A NADH:flavin oxidoreduct 33.8 52 0.0018 28.8 5.0 19 103-121 145-163 (343)
444 1jcn_A Inosine monophosphate d 33.6 51 0.0017 30.0 5.1 70 102-179 255-328 (514)
445 1tv8_A MOAA, molybdenum cofact 33.6 1.3E+02 0.0045 25.1 7.4 100 42-146 82-191 (340)
446 3dmy_A Protein FDRA; predicted 33.2 44 0.0015 31.0 4.7 47 102-151 48-95 (480)
447 3w01_A Heptaprenylglyceryl pho 33.0 1.3E+02 0.0045 25.3 7.2 57 104-164 26-82 (235)
448 3igs_A N-acetylmannosamine-6-p 33.0 45 0.0016 27.4 4.3 62 107-174 94-156 (232)
449 2f6u_A GGGPS, (S)-3-O-geranylg 32.9 1.3E+02 0.0044 25.1 7.1 57 104-164 23-79 (234)
450 1wb0_A Chitinase 1, chitotrios 32.7 73 0.0025 28.5 6.0 20 102-121 98-117 (445)
451 2k6g_A Replication factor C su 32.5 58 0.002 24.1 4.4 66 23-97 33-106 (109)
452 1mhs_A Proton pump, plasma mem 32.5 23 0.0008 35.3 2.8 68 68-146 536-629 (920)
453 1w91_A Beta-xylosidase; MAD, s 32.5 49 0.0017 29.5 4.7 50 102-151 34-101 (503)
454 1ra0_A Cytosine deaminase; alp 32.3 1.1E+02 0.0037 26.0 6.7 16 131-146 261-276 (430)
455 3pzt_A Endoglucanase; alpha/be 32.2 73 0.0025 27.1 5.6 17 102-118 106-122 (327)
456 2ebu_A Replication factor C su 32.0 1.1E+02 0.0036 22.9 5.9 78 13-100 14-99 (112)
457 3ajx_A 3-hexulose-6-phosphate 31.9 1.4E+02 0.0048 23.0 6.9 85 70-164 90-181 (207)
458 3elf_A Fructose-bisphosphate a 31.9 47 0.0016 29.7 4.5 114 39-156 30-168 (349)
459 1q7z_A 5-methyltetrahydrofolat 31.4 3.3E+02 0.011 25.5 11.0 96 46-145 349-467 (566)
460 3be7_A Zn-dependent arginine c 31.4 2.3E+02 0.0077 23.6 11.1 91 39-149 164-267 (408)
461 1w3i_A EDA, 2-keto-3-deoxy glu 31.4 75 0.0026 26.9 5.5 40 102-141 21-63 (293)
462 2ovl_A Putative racemase; stru 31.3 53 0.0018 28.4 4.7 62 25-96 242-306 (371)
463 1tx2_A DHPS, dihydropteroate s 31.2 2.5E+02 0.0087 24.1 9.2 101 54-156 77-211 (297)
464 3si9_A DHDPS, dihydrodipicolin 31.1 70 0.0024 27.5 5.4 39 103-141 45-86 (315)
465 3ox4_A Alcohol dehydrogenase 2 30.9 91 0.0031 27.3 6.2 82 60-146 7-91 (383)
466 3g6m_A Chitinase, crchi1; inhi 30.7 1.1E+02 0.0037 26.9 6.6 49 72-122 92-153 (406)
467 2yb1_A Amidohydrolase; HET: AM 30.7 71 0.0024 26.7 5.3 47 99-148 15-61 (292)
468 1pii_A N-(5'phosphoribosyl)ant 30.7 46 0.0016 30.6 4.3 67 107-180 123-190 (452)
469 3hb7_A Isochorismatase hydrola 30.6 30 0.001 27.6 2.8 78 56-147 98-177 (204)
470 2qs8_A XAA-Pro dipeptidase; am 30.6 1E+02 0.0035 25.9 6.3 49 102-150 177-236 (418)
471 3dz1_A Dihydrodipicolinate syn 30.6 72 0.0025 27.3 5.3 40 101-141 29-72 (313)
472 2z00_A Dihydroorotase; zinc bi 30.5 1.1E+02 0.0039 25.6 6.5 91 24-146 79-171 (426)
473 2y7e_A 3-keto-5-aminohexanoate 30.5 1.2E+02 0.0041 26.1 6.7 106 32-148 27-148 (282)
474 1p1x_A Deoxyribose-phosphate a 30.5 1E+02 0.0035 26.3 6.2 110 41-154 89-209 (260)
475 3bfj_A 1,3-propanediol oxidore 30.5 1.1E+02 0.0037 26.6 6.5 45 102-146 51-95 (387)
476 3olc_X DNA topoisomerase 2-bin 30.5 32 0.0011 29.4 3.1 121 23-151 106-234 (298)
477 2r91_A 2-keto-3-deoxy-(6-phosp 30.4 84 0.0029 26.4 5.7 74 68-145 17-92 (286)
478 2wkj_A N-acetylneuraminate lya 30.3 83 0.0028 26.8 5.7 50 102-151 33-88 (303)
479 3ivs_A Homocitrate synthase, m 30.3 63 0.0021 29.5 5.1 39 104-145 64-102 (423)
480 3qze_A DHDPS, dihydrodipicolin 30.3 71 0.0024 27.5 5.2 40 102-141 45-87 (314)
481 1iuk_A Hypothetical protein TT 30.1 32 0.0011 26.0 2.7 41 101-147 81-121 (140)
482 3ie7_A LIN2199 protein; phosph 29.9 1.1E+02 0.0039 25.0 6.3 62 26-89 105-169 (320)
483 1itx_A Chitinase A1, glycosyl 29.5 1.7E+02 0.0056 25.9 7.7 49 72-121 110-170 (419)
484 2cho_A Glucosaminidase, hexosa 29.4 84 0.0029 30.5 6.1 17 71-87 187-203 (716)
485 3e38_A Two-domain protein cont 29.4 56 0.0019 28.7 4.5 50 99-148 32-90 (343)
486 3hn3_A Beta-G1, beta-glucuroni 29.2 49 0.0017 30.7 4.3 86 51-150 294-387 (613)
487 2yr1_A 3-dehydroquinate dehydr 29.2 38 0.0013 28.5 3.2 81 42-139 105-192 (257)
488 3exr_A RMPD (hexulose-6-phosph 29.2 26 0.00088 28.7 2.1 37 39-75 16-52 (221)
489 2ztj_A Homocitrate synthase; ( 29.2 70 0.0024 28.3 5.1 40 103-145 27-66 (382)
490 3vzx_A Heptaprenylglyceryl pho 29.1 97 0.0033 25.9 5.7 48 104-152 21-68 (228)
491 2nuw_A 2-keto-3-deoxygluconate 29.0 78 0.0027 26.7 5.2 39 103-141 22-63 (288)
492 3gri_A Dihydroorotase, dhoase; 28.9 98 0.0034 26.7 6.0 83 65-152 153-256 (424)
493 3g8r_A Probable spore coat pol 28.9 1.6E+02 0.0054 26.2 7.4 77 67-146 75-164 (350)
494 1f6k_A N-acetylneuraminate lya 28.8 81 0.0028 26.6 5.3 38 103-140 26-67 (293)
495 3ble_A Citramalate synthase fr 28.7 50 0.0017 28.7 4.0 34 105-141 45-79 (337)
496 3be7_A Zn-dependent arginine c 28.6 1.3E+02 0.0043 25.1 6.5 49 102-150 167-226 (408)
497 2f6k_A Metal-dependent hydrola 28.5 60 0.002 26.2 4.3 45 107-151 109-156 (307)
498 2isw_A Putative fructose-1,6-b 28.5 1.4E+02 0.0049 26.3 7.0 49 105-155 89-141 (323)
499 4hz8_A Beta-glucosidase; BGLB, 28.4 1E+02 0.0035 28.1 6.2 46 102-147 59-115 (444)
500 3a5f_A Dihydrodipicolinate syn 28.3 87 0.003 26.4 5.4 76 69-145 21-98 (291)
No 1
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=100.00 E-value=1.7e-61 Score=425.87 Aligned_cols=165 Identities=19% Similarity=0.327 Sum_probs=143.5
Q ss_pred ccCC-CCCCCCCCCCCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceec
Q 028948 9 KSFD-EYEDRAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS 87 (201)
Q Consensus 9 ~~f~-~~~~R~~KPR~~GlTmV~DkG~s~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~ 87 (201)
+.|. ++|.|++|||.+|+|||+|||+ |+++++|+|++||+|||++||||||++|||+ |++||++||+|||+||
T Consensus 24 ~~~~f~~~~R~~KPR~~GlT~v~Dkgl----g~~~~~DlLe~ag~yID~lKfg~GTs~l~~~--l~ekI~l~~~~gV~v~ 97 (276)
T 1u83_A 24 NDFSLELPVRTNKPRETGQSILIDNGY----PLQFFKDAIAGASDYIDFVKFGWGTSLLTKD--LEEKISTLKEHDITFF 97 (276)
T ss_dssp -CCCCCCCCCCCSSCSSSCEEEEESSC----CHHHHHHHHHHHGGGCCEEEECTTGGGGCTT--HHHHHHHHHHTTCEEE
T ss_pred ccccCCCCCcCCCCcccCceEEecCCC----CHHHHHHHHHHhhhhcceEEecCcchhhhHH--HHHHHHHHHHcCCeEe
Confidence 3444 3699999999999999999998 8889999999999999999999999999999 9999999999999999
Q ss_pred Cc-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC----------
Q 028948 88 TG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK---------- 156 (201)
Q Consensus 88 ~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~---------- 156 (201)
|| ||||+|++|| ++++|+++||++||++|||||||++||+++|+++|++++++ |+|++|+|+|++.
T Consensus 98 ~GGTlfE~~l~qg--~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~-f~Vl~EvG~K~~~~~~~~~~~~~ 174 (276)
T 1u83_A 98 FGGTLFEKYVSQK--KVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDE-FLVLSEVGSKDAELASRQSSEEW 174 (276)
T ss_dssp ECHHHHHHHHHTT--CHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTT-SEEEEECSCCC------CCSTHH
T ss_pred CCcHHHHHHHHcC--cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhh-cEEeeeccccCccccCCCCHHHH
Confidence 98 5999999999 99999999999999999999999999999999999999999 9999999999982
Q ss_pred -----CCcccccccccccEEEecccCcCeeccccCC
Q 028948 157 -----SDIPSDRDRAFGAYVARAPRSTDKLFLASNP 187 (201)
Q Consensus 157 -----~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~ 187 (201)
.||+|||+ +||+|+||||+.|+++|-
T Consensus 175 I~~~~~dLeAGA~-----~ViiEaRESG~~Gi~~~~ 205 (276)
T 1u83_A 175 LEYIVEDMEAGAE-----KVITEARESGTGGICSSS 205 (276)
T ss_dssp HHHHHHHHHHTEE-----EEEEC-------------
T ss_pred HHHHHHHHHCCCc-----EEEEeeeccCCCCccCCC
Confidence 57889999 999999999999999874
No 2
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=100.00 E-value=2e-61 Score=421.07 Aligned_cols=158 Identities=21% Similarity=0.357 Sum_probs=153.2
Q ss_pred CCCCCCCceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCc-cHHHHHHH
Q 028948 19 EKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIR 97 (201)
Q Consensus 19 ~KPR~~GlTmV~DkG~s~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G-tlfE~al~ 97 (201)
+|||++|+|||+|||+ |+++++|+|++||+|||++|||||||+|||+++|+|||++||+|||+|||| ||||+|++
T Consensus 8 ~KPR~~GlT~v~dkgl----g~~~~~d~Le~~g~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~ 83 (251)
T 1qwg_A 8 YEDFQRGLTVVLDKGL----PPKFVEDYLKVCGDYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYS 83 (251)
T ss_dssp CCCCCCCCEEEEESSC----CHHHHHHHHHHHGGGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHH
T ss_pred CCCcccCeeEEecCCC----CHHHHHHHHHHhhhhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHH
Confidence 9999999999999998 888999999999999999999999999999999999999999999999998 59999999
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC---------------CCcccc
Q 028948 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK---------------SDIPSD 162 (201)
Q Consensus 98 qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~---------------~dl~ag 162 (201)
|| ++++|+++||++||++|||||||++||+++|+++|++++++||+|++|+|+|++. .||+||
T Consensus 84 qg--~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeAG 161 (251)
T 1qwg_A 84 KG--KFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDAG 161 (251)
T ss_dssp TT--CHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHHT
T ss_pred cC--cHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHCC
Confidence 99 9999999999999999999999999999999999999999999999999999982 679999
Q ss_pred cccccccEEEecccCcCee-ccccCC
Q 028948 163 RDRAFGAYVARAPRSTDKL-FLASNP 187 (201)
Q Consensus 163 ~~~a~g~~Vi~E~Res~~v-~~~~~~ 187 (201)
|+ +||+|+||||+. |+++|-
T Consensus 162 A~-----~ViiEarEsG~~iGi~~~~ 182 (251)
T 1qwg_A 162 AD-----YVIIEGRESGKGKGLFDKE 182 (251)
T ss_dssp CS-----EEEECCTTTCCSSTTBCTT
T ss_pred Cc-----EEEEeeecccCCcccCCCC
Confidence 99 999999999997 999885
No 3
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=95.44 E-value=0.082 Score=42.94 Aligned_cols=100 Identities=10% Similarity=0.100 Sum_probs=74.2
Q ss_pred HHHHHHHhhccc-ccEEEeeCcc-----------ccccChhHHHHHHHHHHhCCceecCc-cHHHHHHHhCCchHHHHHH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGS-----------HSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVE 108 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GT-----------s~l~p~~~L~eKI~l~~~~gV~v~~G-tlfE~al~qg~~~~~eyl~ 108 (201)
.+++.|+.+.+. .|.+=+.... ...++.+.+++.-++++++|+.+..- .+.. ...+.+++.++
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----~~~~~~~~~i~ 98 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVYVA----EKSSDWEKMFK 98 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEECC----SSTTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEeccCC----ccHHHHHHHHH
Confidence 355666655555 7888887543 12345566899999999999987763 3322 23358999999
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 109 ~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.|+.||.+.|-+..| .+.+.++.+.+++.|+++..|-
T Consensus 99 ~A~~lGa~~v~~~~~-----~~~~~~l~~~a~~~gv~l~~En 135 (262)
T 3p6l_A 99 FAKAMDLEFITCEPA-----LSDWDLVEKLSKQYNIKISVHN 135 (262)
T ss_dssp HHHHTTCSEEEECCC-----GGGHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHcCCCEEEecCC-----HHHHHHHHHHHHHhCCEEEEEe
Confidence 999999999999865 4778899999999999985554
No 4
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=94.66 E-value=0.071 Score=43.42 Aligned_cols=45 Identities=4% Similarity=0.093 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc--cCChhHHHHHHHHHHHCCCeE
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSL--EIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti--~i~~~~r~~lI~~~~~~Gf~v 146 (201)
.+++.++.++++||+.||+....+ +++.++..++.+.+++.|+++
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i 77 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTG 77 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 455566666666666666665422 334455555556666666655
No 5
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=94.41 E-value=0.089 Score=42.75 Aligned_cols=46 Identities=22% Similarity=0.390 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------------ccCChhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGS------------LEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGt------------i~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||+.... ..++.++..++-+.+++.|+++.
T Consensus 23 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 80 (262)
T 3p6l_A 23 PLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIV 80 (262)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEE
Confidence 58888999999999999998642 35677788888899999999873
No 6
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=93.82 E-value=1.1 Score=37.91 Aligned_cols=112 Identities=15% Similarity=0.196 Sum_probs=72.4
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhccc-ccEEEeeCccc-cccChhHHHH-----------------HHHHHHhC--Cc
Q 028948 26 VTEMRSPHYTLSSSHNVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIEE-----------------VVKRAHQH--DV 84 (201)
Q Consensus 26 lTmV~DkG~s~~~g~~~l~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~L~e-----------------KI~l~~~~--gV 84 (201)
+++|. +|++ .+....++++..-+. +|.|.+|.=-+ .+.+...+++ .++-.+++ ++
T Consensus 20 i~~i~-~g~p---~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~ 95 (262)
T 2ekc_A 20 VSYLM-VGYP---DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDI 95 (262)
T ss_dssp EEEEE-TTSS---CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTS
T ss_pred EEEec-CCCC---ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCC
Confidence 44443 6662 334555555555555 99999986322 1223333443 34444444 44
Q ss_pred eecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 85 YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 85 ~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
++..=|..-.++..| +++|++.|++.|+|.+=+. ++|.++-.++++.++++|+.+.+
T Consensus 96 Pi~~m~y~n~v~~~g---~~~f~~~~~~aG~dgvii~----dl~~ee~~~~~~~~~~~gl~~i~ 152 (262)
T 2ekc_A 96 PFLLMTYYNPIFRIG---LEKFCRLSREKGIDGFIVP----DLPPEEAEELKAVMKKYVLSFVP 152 (262)
T ss_dssp CEEEECCHHHHHHHC---HHHHHHHHHHTTCCEEECT----TCCHHHHHHHHHHHHHTTCEECC
T ss_pred CEEEEecCcHHHHhh---HHHHHHHHHHcCCCEEEEC----CCCHHHHHHHHHHHHHcCCcEEE
Confidence 443214445555654 7999999999999988886 57778899999999999998744
No 7
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=93.73 E-value=0.29 Score=44.37 Aligned_cols=92 Identities=20% Similarity=0.377 Sum_probs=65.2
Q ss_pred ccEEEeeCccccccChhHHHHHHHHHHhC-CceecCccHHHHHHHhCCchH-HHHHHHHHHcCCCEEEecCCcc------
Q 028948 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAF-KEYVEDCKQVGFDTIELNVGSL------ 125 (201)
Q Consensus 54 ID~lKfg~GTs~l~p~~~L~eKI~l~~~~-gV~v~~GtlfE~al~qg~~~~-~eyl~~~k~lGFd~IEISdGti------ 125 (201)
++.+-||+||..+.+.+.|++.++.++++ ++.- + .|+.+.-+|+.+ ++.++.++++|++.|+|+--|.
T Consensus 105 i~~i~fgGGtpt~l~~~~l~~ll~~i~~~~~~~~--~--~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~ 180 (457)
T 1olt_A 105 VSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNA--D--AEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQR 180 (457)
T ss_dssp EEEEEEEESCGGGSCHHHHHHHHHHHHHHSCEEE--E--EEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHH
T ss_pred eEEEEEeCCCcccCCHHHHHHHHHHHHHhCCCCC--C--cEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHH
Confidence 78899999999999988999999999873 2110 0 011111233332 5788999999999999864443
Q ss_pred ----cCChhHHHHHHHHHHHCCCe-Eccc
Q 028948 126 ----EIPEETLLRYVRLVKSAGLK-AKPK 149 (201)
Q Consensus 126 ----~i~~~~r~~lI~~~~~~Gf~-v~pE 149 (201)
.-+.++..+.|+.+++.||. +...
T Consensus 181 ~i~R~~~~~~~~~ai~~~r~~G~~~v~~d 209 (457)
T 1olt_A 181 LVNREQDEEFIFALLNHAREIGFTSTNID 209 (457)
T ss_dssp HHTCCCCHHHHHHHHHHHHHTTCCSCEEE
T ss_pred HhCCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 23567888999999999997 6443
No 8
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=93.65 E-value=0.14 Score=42.14 Aligned_cols=47 Identities=19% Similarity=0.386 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHCCCeEcc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti-~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
.+++.++.++++||+.||+....+ .++.++..++-+.+++.|+++..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~ 65 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTV 65 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEE
Confidence 588899999999999999987643 46778888899999999999865
No 9
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=93.42 E-value=0.24 Score=40.19 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=71.7
Q ss_pred HHHHHHHhhccc-ccEEEeeCccc-cccChhHHHHHHHHHHhCCceecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~L~eKI~l~~~~gV~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~I 118 (201)
.+++.++.+.+. .|.+=+..... .-++.+.+++..++++++|+.++. +.+.. +..+.+++.++.|++||.+.|
T Consensus 31 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----~~~~~~~~~i~~A~~lGa~~v 106 (257)
T 3lmz_A 31 DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM----KSEEEIDRAFDYAKRVGVKLI 106 (257)
T ss_dssp CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE----CSHHHHHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc----CCHHHHHHHHHHHHHhCCCEE
Confidence 345555555444 77777765521 113456688999999999998775 32211 223478999999999999999
Q ss_pred EecCCcccCChhHHHHHHHHHHHCCCeEccccc
Q 028948 119 ELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 119 EISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
=+.-| .+.+.++.+.+++.|+++..|--
T Consensus 107 ~~~p~-----~~~l~~l~~~a~~~gv~l~lEn~ 134 (257)
T 3lmz_A 107 VGVPN-----YELLPYVDKKVKEYDFHYAIHLH 134 (257)
T ss_dssp EEEEC-----GGGHHHHHHHHHHHTCEEEEECC
T ss_pred EecCC-----HHHHHHHHHHHHHcCCEEEEecC
Confidence 98654 57788999999999999865543
No 10
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=93.39 E-value=0.41 Score=41.73 Aligned_cols=98 Identities=12% Similarity=0.117 Sum_probs=63.3
Q ss_pred chhHHHHHHHhhcc-cccEEEeeCcc--ccccChhHHHHHHHHHHhCCceec--CccHHHHHHHhCCchHHHHHHHHHHc
Q 028948 39 SHNVLEDIFESMGQ-FVDGLKFSGGS--HSLMPKPFIEEVVKRAHQHDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQV 113 (201)
Q Consensus 39 g~~~l~DlLe~ag~-yID~lKfg~GT--s~l~p~~~L~eKI~l~~~~gV~v~--~GtlfE~al~qg~~~~~eyl~~~k~l 113 (201)
.+.++.+.++.+.+ -++-+-|++|+ -...+.+.+.+.++.+++.|+.++ +|. .-++.++.+++.
T Consensus 100 s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~~~~~~l~~ll~~ik~~g~~i~~t~G~-----------l~~e~l~~L~~a 168 (369)
T 1r30_A 100 EVEQVLESARKAKAAGSTRFCMGAAWKNPHERDMPYLEQMVQGVKAMGLEACMTLGT-----------LSESQAQRLANA 168 (369)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCSSCCTTTHHHHHHHHHHHHHTTSEEEEECSS-----------CCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeCCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCC-----------CCHHHHHHHHHC
Confidence 44455554443322 26677787664 334556678888888888887654 232 235667777888
Q ss_pred CCCEEEecCCcc---------cCChhHHHHHHHHHHHCCCeEc
Q 028948 114 GFDTIELNVGSL---------EIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 114 GFd~IEISdGti---------~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
|++.|-||-.+- .-+.+++++.|+.+++.|+.+.
T Consensus 169 Gvd~v~i~les~~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~ 211 (369)
T 1r30_A 169 GLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVRDAGIKVC 211 (369)
T ss_dssp CCCEEECCCBSCHHHHHHHCCSSCHHHHHHHHHHHHHHHCEEE
T ss_pred CCCEEeecCcCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeee
Confidence 888888775551 1355778888888888888763
No 11
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=93.27 E-value=0.16 Score=42.03 Aligned_cols=46 Identities=24% Similarity=0.432 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-------cCChhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSL-------EIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti-------~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||++.... +++.++..++.+.+++.|+++.
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 83 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVP 83 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEE
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 799999999999999999986542 4567778889999999999984
No 12
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=93.00 E-value=0.072 Score=43.86 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc-ccCChhHHHHHHHHHHHCCCeEcc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGS-LEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGt-i~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
.+++.++.++++||+.||+.... ..++.++..++.+.+++.|+++..
T Consensus 22 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 69 (290)
T 3tva_A 22 GLGVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTV 69 (290)
T ss_dssp SSSBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 67889999999999999999743 457788899999999999999854
No 13
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=92.48 E-value=1 Score=38.27 Aligned_cols=100 Identities=18% Similarity=0.146 Sum_probs=69.5
Q ss_pred chhHHHHHHHhhcc-cccEEEeeCccccccChhHHHHHHHHHHhCCceecC-ccHHHHHHHhCCchHHHHHHHHHHcCCC
Q 028948 39 SHNVLEDIFESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (201)
Q Consensus 39 g~~~l~DlLe~ag~-yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd 116 (201)
.+..+.+.++.+-+ -+..+-|.+|...+++.+.+.+.++.+++.++.+.. .+. .-++.++.+++.|++
T Consensus 85 s~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~----------l~~e~l~~L~~ag~~ 154 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGE----------WPREYYEKWKEAGAD 154 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCC----------CCHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCC----------CCHHHHHHHHHhCCC
Confidence 34455554444333 277888888986677767799999999998887763 221 235677778888888
Q ss_pred EEEecCCcc----------cCChhHHHHHHHHHHHCCCeEcc
Q 028948 117 TIELNVGSL----------EIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 117 ~IEISdGti----------~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
.+-+|--+. .-+.+++.+.|+.+++.|+.+..
T Consensus 155 ~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~ 196 (348)
T 3iix_A 155 RYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGA 196 (348)
T ss_dssp EEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred EEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeecc
Confidence 887765444 23678888888888888887633
No 14
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=92.48 E-value=1.3 Score=37.68 Aligned_cols=95 Identities=18% Similarity=0.316 Sum_probs=65.7
Q ss_pred chhHHHHHHHhhcc-cccEEEeeCccccccChhHHHHHHHHHHhCCc----eecC-ccHHHHHHHhCCchHHHHHHHHHH
Q 028948 39 SHNVLEDIFESMGQ-FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV----YVST-GDWAEHLIRNGPSAFKEYVEDCKQ 112 (201)
Q Consensus 39 g~~~l~DlLe~ag~-yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV----~v~~-GtlfE~al~qg~~~~~eyl~~~k~ 112 (201)
....+..+++.+.+ -+..+.|.+|--.+.+. +.+.++.+++.+. .+.| |+++ +++++.+++
T Consensus 51 s~e~i~~~i~~~~~~g~~~i~~tGGEPll~~~--l~~li~~~~~~~~~~~i~i~TNG~ll-----------~~~~~~L~~ 117 (340)
T 1tv8_A 51 TFDEMARIAKVYAELGVKKIRITGGEPLMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLL-----------KKHGQKLYD 117 (340)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEESSCGGGSTT--HHHHHHHHTTCTTCCEEEEEECSTTH-----------HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccchhh--HHHHHHHHHhCCCCCeEEEEeCccch-----------HHHHHHHHH
Confidence 55667766665443 37788999998888764 7799999988853 3444 5543 335566677
Q ss_pred cCCCEEEecCCccc-----------CChhHHHHHHHHHHHCCCeE
Q 028948 113 VGFDTIELNVGSLE-----------IPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 113 lGFd~IEISdGti~-----------i~~~~r~~lI~~~~~~Gf~v 146 (201)
.|++.|.||=-+.+ .+.+...+.|+.+++.|+.|
T Consensus 118 ~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~~v 162 (340)
T 1tv8_A 118 AGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNV 162 (340)
T ss_dssp HTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCCCE
Confidence 88888888866642 14566777888888888765
No 15
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=92.21 E-value=0.21 Score=40.61 Aligned_cols=45 Identities=4% Similarity=0.058 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc------cCChhHHHHHHHHHHHCCCeE
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSL------EIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti------~i~~~~r~~lI~~~~~~Gf~v 146 (201)
.+++.++.++++||+.||+..... .++.++..++.+.+++.|+++
T Consensus 13 ~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (285)
T 1qtw_A 13 GLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTS 63 (285)
T ss_dssp CHHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCG
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 588899999999999999943322 356678888999999999984
No 16
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=92.14 E-value=0.23 Score=40.13 Aligned_cols=87 Identities=10% Similarity=0.129 Sum_probs=39.7
Q ss_pred EEeeCccccccChhHHHHHHHHHHhCCce---ecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC-cccCCh---
Q 028948 57 LKFSGGSHSLMPKPFIEEVVKRAHQHDVY---VSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG-SLEIPE--- 129 (201)
Q Consensus 57 lKfg~GTs~l~p~~~L~eKI~l~~~~gV~---v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdG-ti~i~~--- 129 (201)
.|+|.-|..+ +..-+.+.++.++++|.. +.... .. ........++++.+.+++.|+...-+... .+..+.
T Consensus 7 m~lg~~~~~~-~~~~~~~~l~~~~~~G~~~vEl~~~~-~~-~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~ 83 (272)
T 2q02_A 7 TRFCINRKIA-PGLSIEAFFRLVKRLEFNKVELRNDM-PS-GSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEV 83 (272)
T ss_dssp GGEEEEGGGC-TTSCHHHHHHHHHHTTCCEEEEETTS-TT-SSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHH
T ss_pred hhhhhccccc-CCCCHHHHHHHHHHcCCCEEEeeccc-cc-cccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHH
Confidence 3566655553 322366666666666642 22110 00 00001135666666666666665554321 111111
Q ss_pred -hHHHHHHHHHHHCCCeE
Q 028948 130 -ETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 130 -~~r~~lI~~~~~~Gf~v 146 (201)
+...+.|+.+++.|-+.
T Consensus 84 ~~~~~~~i~~a~~lG~~~ 101 (272)
T 2q02_A 84 VKKTEGLLRDAQGVGARA 101 (272)
T ss_dssp HHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHHHHHhCCCE
Confidence 23345566666666543
No 17
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=92.08 E-value=0.28 Score=39.95 Aligned_cols=47 Identities=17% Similarity=0.360 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHCCCeEcc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti-~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
.+++.++.++++||+.||+..... ..+.++..++.+.+++.|+++..
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~ 65 (290)
T 2qul_A 18 DFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMC 65 (290)
T ss_dssp CHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEE
T ss_pred cHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEE
Confidence 588889999999999999986542 33446777888889999998865
No 18
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=91.84 E-value=2.3 Score=34.77 Aligned_cols=104 Identities=14% Similarity=0.197 Sum_probs=69.2
Q ss_pred HHHHHHHhhccc-ccEEEeeCccccccChhHHHHHHHHHHhCCceecC---c--cHH----HHHHHhCCchHHHHHHHHH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST---G--DWA----EHLIRNGPSAFKEYVEDCK 111 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~---G--tlf----E~al~qg~~~~~eyl~~~k 111 (201)
.+++.|+.+.+. .|.+=+.... ....+++.-++++++|+.+.. + +++ +....+.-+.+++.++.|+
T Consensus 39 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 114 (287)
T 3kws_A 39 SLNEKLDFMEKLGVVGFEPGGGG----LAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAG 114 (287)
T ss_dssp SHHHHHHHHHHTTCCEEECBSTT----CGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCCc----hHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 567777766665 7888887653 234589999999999998753 2 121 1111111126889999999
Q ss_pred HcCCCEEEecCCcccC------Ch-------hHHHHHHHHHHHCCCeEccc
Q 028948 112 QVGFDTIELNVGSLEI------PE-------ETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 112 ~lGFd~IEISdGti~i------~~-------~~r~~lI~~~~~~Gf~v~pE 149 (201)
+||.+.|=+..|+... .+ +...++.+.+++.|+++..|
T Consensus 115 ~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 165 (287)
T 3kws_A 115 ELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFE 165 (287)
T ss_dssp HTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEC
T ss_pred HcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEE
Confidence 9999999987765432 22 33445666788889888666
No 19
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.69 E-value=1.1 Score=38.52 Aligned_cols=102 Identities=18% Similarity=0.339 Sum_probs=67.7
Q ss_pred hhHHHHHHHhhc-ccccEEEeeCc-cccccChhHHH-----------------HHHHHHHhC--CceecCccHHHHHHHh
Q 028948 40 HNVLEDIFESMG-QFVDGLKFSGG-SHSLMPKPFIE-----------------EVVKRAHQH--DVYVSTGDWAEHLIRN 98 (201)
Q Consensus 40 ~~~l~DlLe~ag-~yID~lKfg~G-Ts~l~p~~~L~-----------------eKI~l~~~~--gV~v~~GtlfE~al~q 98 (201)
+..+.+++...- .=+|+|=+|.= |-.+++-..++ +.++-.|+. ++++..=|++.-.++.
T Consensus 31 ~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~ 110 (267)
T 3vnd_A 31 PELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFAN 110 (267)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHh
Confidence 345555554433 34799999821 11233333333 334444443 3443322777887777
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 99 GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 99 g~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
| +++|++.|++.|+|.+=|. ++|.++..++++.++++|+.+.+
T Consensus 111 g---~e~f~~~~~~aGvdgvii~----Dlp~ee~~~~~~~~~~~gl~~i~ 153 (267)
T 3vnd_A 111 G---IDEFYTKAQAAGVDSVLIA----DVPVEESAPFSKAAKAHGIAPIF 153 (267)
T ss_dssp C---HHHHHHHHHHHTCCEEEET----TSCGGGCHHHHHHHHHTTCEEEC
T ss_pred h---HHHHHHHHHHcCCCEEEeC----CCCHhhHHHHHHHHHHcCCeEEE
Confidence 6 7999999999999999996 57778888999999999998743
No 20
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=91.46 E-value=1 Score=36.82 Aligned_cols=107 Identities=11% Similarity=0.115 Sum_probs=69.4
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCc-c-H-----HHH-------------HHHhCCc
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-D-W-----AEH-------------LIRNGPS 101 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G-t-l-----fE~-------------al~qg~~ 101 (201)
..=+.+..+| .|.+=+.+.....++.+.+++..++++++|+.+..- . | ... ...+.-+
T Consensus 25 ~~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~ 102 (290)
T 3tva_A 25 VHLEVAQDLK--VPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVA 102 (290)
T ss_dssp BCHHHHHHTT--CSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHH
T ss_pred HHHHHHHHcC--CCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHH
Confidence 4444455555 677777765444455667999999999999977652 1 1 110 0000012
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCC-hh-------HHHHHHHHHHHCCCeEcccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIP-EE-------TLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~-~~-------~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.+++.++.|++||.+.|=+..|...-. ++ ...++.+.+++.|+++..|-
T Consensus 103 ~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 159 (290)
T 3tva_A 103 EMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLET 159 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 689999999999999999987765321 22 23456677788899885554
No 21
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=91.36 E-value=0.3 Score=40.83 Aligned_cols=46 Identities=22% Similarity=0.291 Sum_probs=37.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCC--ccc-----CChhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVG--SLE-----IPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdG--ti~-----i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||+... .++ .+.+...++.+.+++.|+++.
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 68 (340)
T 2zds_A 16 PLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCW 68 (340)
T ss_dssp CHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEE
Confidence 7899999999999999999863 333 234567788999999999984
No 22
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=91.26 E-value=0.84 Score=40.10 Aligned_cols=66 Identities=8% Similarity=0.025 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccccc-ccCCCCcccccccccccEEEecccCc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV-MFNKSDIPSDRDRAFGAYVARAPRST 178 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~-k~~~~dl~ag~~~a~g~~Vi~E~Res 178 (201)
.++++++.+.+.|.+.|.+.-|.. . .++++.+++.|+++...+.- .....-.++|+| +|++++++.
T Consensus 110 ~~~~~~~~~~~~g~~~V~~~~g~~---~---~~~i~~~~~~g~~v~~~v~t~~~a~~a~~~GaD-----~i~v~g~~~ 176 (369)
T 3bw2_A 110 GYDAKLAVLLDDPVPVVSFHFGVP---D---REVIARLRRAGTLTLVTATTPEEARAVEAAGAD-----AVIAQGVEA 176 (369)
T ss_dssp THHHHHHHHHHSCCSEEEEESSCC---C---HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-----EEEEECTTC
T ss_pred cHHHHHHHHHhcCCCEEEEeCCCC---c---HHHHHHHHHCCCeEEEECCCHHHHHHHHHcCCC-----EEEEeCCCc
Confidence 589999999999999999987753 1 36778888889887654321 111123456777 999988774
No 23
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=90.89 E-value=0.15 Score=41.71 Aligned_cols=45 Identities=13% Similarity=0.146 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||+......-+. +..++-+.+++.|+++.
T Consensus 24 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~-~~~~~~~~l~~~gl~i~ 68 (264)
T 1yx1_A 24 GQASFLPLLAMAGAQRVELREELFAGPP-DTEALTAAIQLQGLECV 68 (264)
T ss_dssp CGGGGHHHHHHHTCSEEEEEGGGCSSCC-CHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHcCCCEEEEEHHhcCCCH-HHHHHHHHHHHcCCEEE
Confidence 5677888888888888888744222122 56677778888888863
No 24
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=90.89 E-value=0.53 Score=41.42 Aligned_cols=136 Identities=16% Similarity=0.087 Sum_probs=90.1
Q ss_pred HHHHHHHhhcccccEEEeeCccccccCh-----------hHHHHHHHHHHhCCceecCc--cHHHHHHHhCCchHHHHHH
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYVE 108 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~L~eKI~l~~~~gV~v~~G--tlfE~al~qg~~~~~eyl~ 108 (201)
.++..++.- +|.+-+-..+|-.+.. +.+++-++.++++|+.|... .|+. .-...++.+-+..+
T Consensus 101 ~i~~a~~~g---~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~ 176 (337)
T 3ble_A 101 TVDWIKDSG---AKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSN-GFRNSPDYVKSLVE 176 (337)
T ss_dssp HHHHHHHHT---CCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHH-HHHHCHHHHHHHHH
T ss_pred hHHHHHHCC---CCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC-CCcCCHHHHHHHHH
Confidence 555555543 4666665555543311 45788899999999988764 3332 33445567888888
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEecccCc
Q 028948 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVARAPRST 178 (201)
Q Consensus 109 ~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res 178 (201)
.+.++|.+.|=|.|-.--+.+.+-.++|+.++++ +. ...+++.+-+ ..+++|++ .|-. -=.
T Consensus 177 ~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~p-~~~i~~H~Hnd~GlA~AN~laAv~aGa~-----~vd~--tv~ 247 (337)
T 3ble_A 177 HLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQK-YP-DIHFEFHGHNDYDLSVANSLQAIRAGVK-----GLHA--SIN 247 (337)
T ss_dssp HHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHH-CT-TSCEEEECBCTTSCHHHHHHHHHHTTCS-----EEEE--BGG
T ss_pred HHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHh-cC-CCeEEEEecCCcchHHHHHHHHHHhCCC-----EEEE--ecc
Confidence 8999999999999988888999999999999887 31 2234443322 34777877 4433 333
Q ss_pred CeeccccCCcee
Q 028948 179 DKLFLASNPEIE 190 (201)
Q Consensus 179 ~~v~~~~~~~~~ 190 (201)
|.=+-+.|+.+|
T Consensus 248 GlG~~aGN~~~E 259 (337)
T 3ble_A 248 GLGERAGNTPLE 259 (337)
T ss_dssp GCSSTTCBCBHH
T ss_pred cccccccchhHH
Confidence 333457788776
No 25
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=90.85 E-value=0.11 Score=41.86 Aligned_cols=85 Identities=13% Similarity=0.037 Sum_probs=46.2
Q ss_pred EEeeCccccccChhHHHHHHHHHHhCCce-ecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC--cccCCh----
Q 028948 57 LKFSGGSHSLMPKPFIEEVVKRAHQHDVY-VSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG--SLEIPE---- 129 (201)
Q Consensus 57 lKfg~GTs~l~p~~~L~eKI~l~~~~gV~-v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdG--ti~i~~---- 129 (201)
.|+|.-|..+.++--+.+.++.++++|.. +-.- .... ... .++++.+.+++.|+...-++-+ ...-++
T Consensus 5 ~~lg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~--~~~~-~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~ 79 (275)
T 3qc0_A 5 EGLSINLATIREQCGFAEAVDICLKHGITAIAPW--RDQV-AAI--GLGEAGRIVRANGLKLTGLCRGGFFPAPDASGRE 79 (275)
T ss_dssp TTEEEEGGGGTTTCCHHHHHHHHHHTTCCEEECB--HHHH-HHH--CHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHH
T ss_pred ccceeeeeeccCCCCHHHHHHHHHHcCCCEEEec--cccc-ccc--CHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHH
Confidence 46777777775444577778888887762 2221 1111 122 5677777777777765433311 111122
Q ss_pred ---hHHHHHHHHHHHCCCeE
Q 028948 130 ---ETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 130 ---~~r~~lI~~~~~~Gf~v 146 (201)
+...+.|+.++..|-+.
T Consensus 80 ~~~~~~~~~i~~a~~lG~~~ 99 (275)
T 3qc0_A 80 KAIDDNRRAVDEAAELGADC 99 (275)
T ss_dssp HHHHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHHHHHHHHHhCCCE
Confidence 23445666666666653
No 26
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=90.83 E-value=0.25 Score=39.81 Aligned_cols=86 Identities=12% Similarity=0.108 Sum_probs=46.1
Q ss_pred EeeCccccccChhHHHHHHHHHHhCCc---eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC---Ch-
Q 028948 58 KFSGGSHSLMPKPFIEEVVKRAHQHDV---YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI---PE- 129 (201)
Q Consensus 58 Kfg~GTs~l~p~~~L~eKI~l~~~~gV---~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i---~~- 129 (201)
|+|.-|..+++..-+.+.++.++++|. .+. ...... +. .+...+++.+.+++.|+...-+.... .+ ++
T Consensus 2 klg~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~--~~-~~~~~~~~~~~l~~~gl~~~~~~~~~-~~~~~~~~ 77 (278)
T 1i60_A 2 KLCFNEATTLENSNLKLDLELCEKHGYDYIEIRTMDKLPE--YL-KDHSLDDLAEYFQTHHIKPLALNALV-FFNNRDEK 77 (278)
T ss_dssp EEEEEGGGGTTTCCHHHHHHHHHHTTCSEEEEETTTHHHH--HT-TSSCHHHHHHHHHTSSCEEEEEEEEE-CCSSCCHH
T ss_pred eeEechhhcccCCCHHHHHHHHHHhCCCEEEEccHHHHHH--Hh-ccCCHHHHHHHHHHcCCCeeeecccc-ccccCCHH
Confidence 666666665444457777777777765 233 222211 11 12367777777777777665443321 22 22
Q ss_pred ------hHHHHHHHHHHHCCCeEc
Q 028948 130 ------ETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 130 ------~~r~~lI~~~~~~Gf~v~ 147 (201)
+...+.|+.|++.|-+..
T Consensus 78 ~~~~~~~~~~~~i~~a~~lG~~~v 101 (278)
T 1i60_A 78 GHNEIITEFKGMMETCKTLGVKYV 101 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEE
Confidence 233456666666666543
No 27
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=90.75 E-value=0.23 Score=42.29 Aligned_cols=70 Identities=19% Similarity=0.145 Sum_probs=48.5
Q ss_pred EEEeeCccccccChhHHHHHHHHHHhCCceecCc-cHHHHHHHhCCchHHHHHHHHHHc-CCCEEEecCCcccCChhHHH
Q 028948 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQV-GFDTIELNVGSLEIPEETLL 133 (201)
Q Consensus 56 ~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~l-GFd~IEISdGti~i~~~~r~ 133 (201)
.-|||.|++.+-.+ +..++. |+ +.+..+++.++.++++ ||+.||+.--. .. .++..
T Consensus 7 ~~~~~~~~w~~~~~--------------~~~f~~~g~------~~~~~~~e~l~~aa~~~G~~~VEl~~~~-~~-~~~~~ 64 (333)
T 3ktc_A 7 YPEFGAGLWHFANY--------------IDRYAVDGY------GPALSTIDQINAAKEVGELSYVDLPYPF-TP-GVTLS 64 (333)
T ss_dssp CCCEEEEGGGGSCC--------------CCSSSTTCS------SCCCCHHHHHHHHHHHSSEEEEEEEESC-ST-TCCHH
T ss_pred CCcceeeeeeeecc--------------cccccCCCC------CCCCCHHHHHHHHHHhCCCCEEEecCCC-cc-hhHHH
Confidence 35889999888764 223232 22 1134799999999999 99999996111 11 35677
Q ss_pred HHHHHHHHCCCeEc
Q 028948 134 RYVRLVKSAGLKAK 147 (201)
Q Consensus 134 ~lI~~~~~~Gf~v~ 147 (201)
++-+.+++.|+++.
T Consensus 65 ~l~~~l~~~Gl~i~ 78 (333)
T 3ktc_A 65 EVKDALKDAGLKAI 78 (333)
T ss_dssp HHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCeEE
Confidence 88888999999983
No 28
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=90.73 E-value=0.22 Score=40.53 Aligned_cols=45 Identities=16% Similarity=0.257 Sum_probs=35.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHCCCeE
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGt------i~i~~~~r~~lI~~~~~~Gf~v 146 (201)
.+++.++.++++||+.||+.... ..++.++..++.+.+++.|+++
T Consensus 13 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~ 63 (287)
T 2x7v_A 13 GFDRVPQDTVNIGGNSFQIFPHNARSWSAKLPSDEAATKFKREMKKHGIDW 63 (287)
T ss_dssp CGGGHHHHHHHTTCSEEEECSCCCSSSCCCCCCHHHHHHHHHHHHHHTCCG
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCcccccccCCCHHHHHHHHHHHHHcCCCc
Confidence 47788899999999999996532 1456678888889999999984
No 29
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=90.72 E-value=0.26 Score=40.41 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||+. +.. + +..++.+.+++.|+++.
T Consensus 32 ~~~~~l~~~~~~G~~~vEl~-~~~--~--~~~~~~~~l~~~gl~~~ 72 (301)
T 3cny_A 32 NLQQLLSDIVVAGFQGTEVG-GFF--P--GPEKLNYELKLRNLEIA 72 (301)
T ss_dssp CHHHHHHHHHHHTCCEECCC-TTC--C--CHHHHHHHHHHTTCEEC
T ss_pred CHHHHHHHHHHhCCCEEEec-CCC--C--CHHHHHHHHHHCCCeEE
Confidence 45566666666666666665 221 2 34455555566666654
No 30
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=90.69 E-value=0.9 Score=36.07 Aligned_cols=97 Identities=11% Similarity=-0.061 Sum_probs=63.1
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhC--CceecCccHHHHHHHhCCchHHHHHHHHHHcCCC
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~--gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd 116 (201)
.+...-++++..++++|++|.|+=.+.-... +.|+..++. +++++-..-+ .. -.+.+++.|.+.|.|
T Consensus 11 ~~~~~~~~~~~~~~~~diie~G~p~~~~~g~----~~i~~ir~~~~~~~i~~~~~~-----~~--~~~~~~~~~~~~Gad 79 (211)
T 3f4w_A 11 TLPEAMVFMDKVVDDVDIIEVGTPFLIREGV----NAIKAIKEKYPHKEVLADAKI-----MD--GGHFESQLLFDAGAD 79 (211)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHTT----HHHHHHHHHCTTSEEEEEEEE-----CS--CHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHhhcCccEEEeCcHHHHhccH----HHHHHHHHhCCCCEEEEEEEe-----cc--chHHHHHHHHhcCCC
Confidence 4566677777777899999999711111122 334444443 6666543211 11 234458999999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHCCCeEccc
Q 028948 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE 149 (201)
.|=+.+-. +.+...++++.+++.|+++..+
T Consensus 80 ~v~v~~~~---~~~~~~~~~~~~~~~g~~~~v~ 109 (211)
T 3f4w_A 80 YVTVLGVT---DVLTIQSCIRAAKEAGKQVVVD 109 (211)
T ss_dssp EEEEETTS---CHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEeCCC---ChhHHHHHHHHHHHcCCeEEEE
Confidence 99996543 3466678999999999998765
No 31
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=90.55 E-value=0.37 Score=39.57 Aligned_cols=84 Identities=12% Similarity=0.063 Sum_probs=43.7
Q ss_pred EEeeCccccccChhHHHHHHHHHHhCCce-ecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc---c-cCCh--
Q 028948 57 LKFSGGSHSLMPKPFIEEVVKRAHQHDVY-VSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS---L-EIPE-- 129 (201)
Q Consensus 57 lKfg~GTs~l~p~~~L~eKI~l~~~~gV~-v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGt---i-~i~~-- 129 (201)
.|+|.-|..+... -+.+.++.++++|.. |-.... +-...++++.+.+++.|+...-+.-+. + +.++
T Consensus 26 mklg~~~~~~~~~-~~~~~l~~~~~~G~~~vEl~~~------~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~ 98 (287)
T 3kws_A 26 LKLSFQEGIAPGE-SLNEKLDFMEKLGVVGFEPGGG------GLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAI 98 (287)
T ss_dssp CEEEEETTSSCCS-SHHHHHHHHHHTTCCEEECBST------TCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHH
T ss_pred eeEEEEecccCCC-CHHHHHHHHHHcCCCEEEecCC------chHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHH
Confidence 4666665555443 367777777777652 222111 001256677777777777665544331 1 1222
Q ss_pred -----hHHHHHHHHHHHCCCeEc
Q 028948 130 -----ETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 130 -----~~r~~lI~~~~~~Gf~v~ 147 (201)
+...+.|+.++..|-+..
T Consensus 99 r~~~~~~~~~~i~~a~~lGa~~v 121 (287)
T 3kws_A 99 RKECMDTMKEIIAAAGELGSTGV 121 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEE
Confidence 233455566666665555
No 32
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=90.42 E-value=0.44 Score=40.31 Aligned_cols=44 Identities=14% Similarity=0.237 Sum_probs=35.1
Q ss_pred HHHHHHHHcCCCEEEecCCcc-cCC----hhHHHHHHHHHHHCCCe---Ecc
Q 028948 105 EYVEDCKQVGFDTIELNVGSL-EIP----EETLLRYVRLVKSAGLK---AKP 148 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti-~i~----~~~r~~lI~~~~~~Gf~---v~p 148 (201)
+.++.++++||+.||++.... ..+ .++..++.+.+++.|++ +..
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~ 86 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKIST 86 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEE
Confidence 899999999999999986533 222 36777888899999999 754
No 33
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=90.29 E-value=0.39 Score=40.59 Aligned_cols=45 Identities=16% Similarity=0.191 Sum_probs=30.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCC------cccC-----ChhHHHHHHHHHHHCCCeE
Q 028948 102 AFKEYVEDCKQVGFDTIELNVG------SLEI-----PEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdG------ti~i-----~~~~r~~lI~~~~~~Gf~v 146 (201)
.+++.++.++++||+.||+... ...+ +.++..++-+.+++.|+++
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i 92 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRI 92 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeE
Confidence 5777888888888888888743 1122 2225667777777888876
No 34
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=90.07 E-value=2.7 Score=36.00 Aligned_cols=105 Identities=10% Similarity=0.120 Sum_probs=76.2
Q ss_pred chhHHHHHHHhhcc-cccEEEeeCccc-cccChhHHH--------------HHHHHHHhCC--ceecCccHHHHHHHhCC
Q 028948 39 SHNVLEDIFESMGQ-FVDGLKFSGGSH-SLMPKPFIE--------------EVVKRAHQHD--VYVSTGDWAEHLIRNGP 100 (201)
Q Consensus 39 g~~~l~DlLe~ag~-yID~lKfg~GTs-~l~p~~~L~--------------eKI~l~~~~g--V~v~~GtlfE~al~qg~ 100 (201)
.+..+.+++...-+ =.|+|=+|.=-| .+.+-..++ .-.++.++.. +++..=|++.-.++.|
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G- 104 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYG- 104 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhh-
Confidence 55677777777655 489999997433 233333444 3344444432 3333338888888886
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+++|++.|++.|.|.+=|-| +|.|+..++.+.++++|+...+-+
T Consensus 105 --~e~F~~~~~~aGvdG~IipD----LP~eE~~~~~~~~~~~Gl~~I~lv 148 (252)
T 3tha_A 105 --LEKFVKKAKSLGICALIVPE----LSFEESDDLIKECERYNIALITLV 148 (252)
T ss_dssp --HHHHHHHHHHTTEEEEECTT----CCGGGCHHHHHHHHHTTCEECEEE
T ss_pred --HHHHHHHHHHcCCCEEEeCC----CCHHHHHHHHHHHHHcCCeEEEEe
Confidence 89999999999999999887 888999999999999999885544
No 35
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=90.00 E-value=1.3 Score=35.03 Aligned_cols=94 Identities=14% Similarity=0.078 Sum_probs=62.5
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhC-CceecCc-cHHHHHHHhCCchHHHHHHHHHHcCCC
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~-gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd 116 (201)
.+....++++..++++|++|+|++.+.-...+.+++.- +.+ ++++..+ ... + --+.|++.+.+.|.|
T Consensus 11 ~~~~~~~~~~~~~~~v~~iev~~~~~~~~g~~~i~~l~---~~~~~~~i~~~l~~~------d--i~~~~~~~a~~~Gad 79 (207)
T 3ajx_A 11 STEAALELAGKVAEYVDIIELGTPLIKAEGLSVITAVK---KAHPDKIVFADMKTM------D--AGELEADIAFKAGAD 79 (207)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHHH---HHSTTSEEEEEEEEC------S--CHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHhhccCCEEEECcHHHHhhCHHHHHHHH---HhCCCCeEEEEEEec------C--ccHHHHHHHHhCCCC
Confidence 56688888998999999999999865334444444422 223 5555543 111 2 134578889999999
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHCCCeE
Q 028948 117 TIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
.|=+..+.- .+...++++.+++.|..+
T Consensus 80 ~v~vh~~~~---~~~~~~~~~~~~~~g~~~ 106 (207)
T 3ajx_A 80 LVTVLGSAD---DSTIAGAVKAAQAHNKGV 106 (207)
T ss_dssp EEEEETTSC---HHHHHHHHHHHHHHTCEE
T ss_pred EEEEeccCC---hHHHHHHHHHHHHcCCce
Confidence 998877654 234457778888888775
No 36
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=89.52 E-value=0.45 Score=38.85 Aligned_cols=42 Identities=19% Similarity=0.162 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||+..-. ..+..++-+.+++.|+++.
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~~----~~~~~~~~~~l~~~gl~~~ 65 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFPY----DFDADVIARELKQHNLTQV 65 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCCT----TSCHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHcCCCEEEecCCc----cCCHHHHHHHHHHcCCcEE
Confidence 68889999999999999997521 2345677888888999874
No 37
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=89.34 E-value=1.5 Score=34.57 Aligned_cols=99 Identities=15% Similarity=0.259 Sum_probs=64.3
Q ss_pred chhHHHHHHHhhccc----ccEEEeeCccccccChhHHHHHHHHHHhCCceec--C-ccHHHHHHHhCCchHHHHHHHHH
Q 028948 39 SHNVLEDIFESMGQF----VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS--T-GDWAEHLIRNGPSAFKEYVEDCK 111 (201)
Q Consensus 39 g~~~l~DlLe~ag~y----ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~--~-GtlfE~al~qg~~~~~eyl~~~k 111 (201)
.+..+.+.++...++ ++.+-|++|.-.+.+ +.|.+.++.++++|+.+. + |++++ . ++.++.+.
T Consensus 51 ~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~l~~-~~l~~l~~~~~~~~~~i~i~Tng~~~~-----~----~~~~~~l~ 120 (245)
T 3c8f_A 51 TVEDLMKEVVTYRHFMNASGGGVTASGGEAILQA-EFVRDWFRACKKEGIHTCLDTNGFVRR-----Y----DPVIDELL 120 (245)
T ss_dssp CHHHHHHHHGGGHHHHTSTTCEEEEEESCGGGGH-HHHHHHHHHHHTTTCCEEEEECCCCCC-----C----CHHHHHHH
T ss_pred CHHHHHHHHHHhhhhhcCCCCeEEEECCCcCCCH-HHHHHHHHHHHHcCCcEEEEeCCCcCc-----C----HHHHHHHH
Confidence 344555666655544 578999999988765 568999999999987543 4 54321 1 12233344
Q ss_pred HcCCCEEEecCCccc---------CChhHHHHHHHHHHHCCCeEcc
Q 028948 112 QVGFDTIELNVGSLE---------IPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 112 ~lGFd~IEISdGti~---------i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
+. ++.|-||=-+.+ .+.++..+.|+.+++.|+.+..
T Consensus 121 ~~-~~~v~isld~~~~~~~~~~~~~~~~~~~~~i~~l~~~g~~v~i 165 (245)
T 3c8f_A 121 EV-TDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANKNVKVWI 165 (245)
T ss_dssp HT-CSEEEEECCCSSHHHHHHHHSSCSHHHHHHHHHHHHHTCCEEE
T ss_pred Hh-CCEEEEeCCCCCHHHhhhccCCCHHHHHHHHHHHHhcCCEEEE
Confidence 44 677888754431 3446677888899998887643
No 38
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=89.34 E-value=0.4 Score=39.48 Aligned_cols=43 Identities=19% Similarity=0.218 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeE
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
.+++.++.++++||+.||+..... ...+..++.+.+++.|+++
T Consensus 42 ~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~~l~~~gl~~ 84 (290)
T 2zvr_A 42 DLRKGMELAKRVGYQAVEIAVRDP--SIVDWNEVKILSEELNLPI 84 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEEECSCG--GGSCHHHHHHHHHHHTCCE
T ss_pred CHHHHHHHHHHhCCCEEEEcCCCc--chhhHHHHHHHHHHcCCeE
Confidence 688889999999999999986532 2355667888888899987
No 39
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=89.32 E-value=0.41 Score=39.90 Aligned_cols=46 Identities=22% Similarity=0.277 Sum_probs=34.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc-ccCChhHHHHHHHHHHHCCCeEcc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGS-LEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGt-i~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
.+++ ++.++++||+.||+.... ...+.++..++.+.+++.|+++..
T Consensus 38 ~l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~ 84 (309)
T 2hk0_A 38 FGPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTA 84 (309)
T ss_dssp SHHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEE
T ss_pred cHHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEE
Confidence 6788 888999999999987542 233346677888888888998866
No 40
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=89.28 E-value=1.1 Score=38.70 Aligned_cols=105 Identities=14% Similarity=0.279 Sum_probs=70.6
Q ss_pred chhHHHHHHHhhc-ccccEEEeeCcc-ccccChhHHH-----------------HHHHHHHhC--CceecCccHHHHHHH
Q 028948 39 SHNVLEDIFESMG-QFVDGLKFSGGS-HSLMPKPFIE-----------------EVVKRAHQH--DVYVSTGDWAEHLIR 97 (201)
Q Consensus 39 g~~~l~DlLe~ag-~yID~lKfg~GT-s~l~p~~~L~-----------------eKI~l~~~~--gV~v~~GtlfE~al~ 97 (201)
.+..+.+++...- .-+|+|=+|.=- -.+.+-..++ +.++-.|+. ++++..=|++...++
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYA 111 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 3445555555442 249999999532 1233333344 344445544 344332278888777
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 98 qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.| +++|++.|++.|+|.+=|. ++|.++..++++.++++|+.+.+-+
T Consensus 112 ~g---~~~f~~~~~~aGvdGvIip----Dlp~ee~~~~~~~~~~~gl~~I~lv 157 (271)
T 3nav_A 112 RG---IDDFYQRCQKAGVDSVLIA----DVPTNESQPFVAAAEKFGIQPIFIA 157 (271)
T ss_dssp TC---HHHHHHHHHHHTCCEEEET----TSCGGGCHHHHHHHHHTTCEEEEEE
T ss_pred Hh---HHHHHHHHHHCCCCEEEEC----CCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 75 8999999999999999886 6777888899999999999874433
No 41
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=88.83 E-value=1.2 Score=36.06 Aligned_cols=86 Identities=8% Similarity=-0.071 Sum_probs=54.7
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhC--Cceec--------CccHHHHHHHhCCchHHHHHH
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVS--------TGDWAEHLIRNGPSAFKEYVE 108 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~--gV~v~--------~GtlfE~al~qg~~~~~eyl~ 108 (201)
.+....++++..++|+|++|++.|-+.-+..+.+++. +++ |..++ |.|+.|
T Consensus 14 ~~~~~~~~~~~~~~~v~~~kv~~~~f~~~G~~~i~~l----~~~~p~~~v~lD~kl~dip~t~~~--------------- 74 (216)
T 1q6o_A 14 TMDSAYETTRLIAEEVDIIEVGTILCVGEGVRAVRDL----KALYPHKIVLADAKIADAGKILSR--------------- 74 (216)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHH----HHHCTTSEEEEEEEECSCHHHHHH---------------
T ss_pred CHHHHHHHHHHhcccCCEEEECHHHHHHhCHHHHHHH----HHhCCCCeEEEEEEecccHHHHHH---------------
Confidence 5667788889899999999999987755555555443 333 44443 224444
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeE
Q 028948 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 109 ~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
.+.++|.|.|-+.-..- .+...++++.+++.|.++
T Consensus 75 ~~~~~Gad~itvh~~~g---~~~l~~~~~~~~~~g~~~ 109 (216)
T 1q6o_A 75 MCFEANADWVTVICCAD---INTAKGALDVAKEFNGDV 109 (216)
T ss_dssp HHHHTTCSEEEEETTSC---HHHHHHHHHHHHHTTCEE
T ss_pred HHHhCCCCEEEEeccCC---HHHHHHHHHHHHHcCCCc
Confidence 45567777777754322 333446677777777664
No 42
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=88.70 E-value=0.71 Score=37.49 Aligned_cols=43 Identities=14% Similarity=0.241 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHCCC
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGt------i~i~~~~r~~lI~~~~~~Gf 144 (201)
.+++.++.++++||+.|||.... ..++.++..++-+.+++.|+
T Consensus 15 ~~~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl 63 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGG 63 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCC
Confidence 45666666777777777774321 13445566666666666676
No 43
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase, carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter protophormiae} PDB: 3fhq_A* 3fha_A*
Probab=88.44 E-value=1.1 Score=43.12 Aligned_cols=90 Identities=19% Similarity=0.361 Sum_probs=58.2
Q ss_pred hcccccEEEeeC-ccc---cccChhHHHHHHHHHHhCCceecCcc-------------HHHHHHHhCCc----hHHHHHH
Q 028948 50 MGQFVDGLKFSG-GSH---SLMPKPFIEEVVKRAHQHDVYVSTGD-------------WAEHLIRNGPS----AFKEYVE 108 (201)
Q Consensus 50 ag~yID~lKfg~-GTs---~l~p~~~L~eKI~l~~~~gV~v~~Gt-------------lfE~al~qg~~----~~~eyl~ 108 (201)
.=+|||..=. | |++ .+.++ =..-|+.||+|||+|. || |++.++.++.+ -+++.++
T Consensus 88 ~W~yvD~fvy-fshs~~~~~~~~P--~~~widaAHrnGV~Vl-Gt~~fe~~~~gg~~~~~~~lL~~~~~~~~~~a~kLv~ 163 (626)
T 2vtf_A 88 YWHYTDLMVY-WAGSAGEGIIVPP--SADVIDASHRNGVPIL-GNVFFPPTVYGGQLEWLEQMLEQEEDGSFPLADKLLE 163 (626)
T ss_dssp CGGGCSEEEE-CCCBTTTBSEECC--CHHHHHHHHHTTCCEE-EEEEECCGGGTCCHHHHHHHTCCCTTCCCHHHHHHHH
T ss_pred cccceeeeee-ecCCCccceeeCC--CcHHHHHHHHcCCEEE-EEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHH
Confidence 4468997643 3 221 33443 2467899999999887 32 45666645432 3799999
Q ss_pred HHHHcCCCEEEecCCcccCChhH---HHHHHHHHHHCC
Q 028948 109 DCKQVGFDTIELNVGSLEIPEET---LLRYVRLVKSAG 143 (201)
Q Consensus 109 ~~k~lGFd~IEISdGti~i~~~~---r~~lI~~~~~~G 143 (201)
.|+.+|||.+=|+-=+-.++.+. ...+++.+++.+
T Consensus 164 ~a~~yGFDGw~IN~E~~~~~~~~~~~l~~F~~~L~~~~ 201 (626)
T 2vtf_A 164 VADYYGFDGWFINQQTEGADEGTAEAMQAFLVYLQEQK 201 (626)
T ss_dssp HHHHHTCCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHhCCCceEEeeccccCCHHHHHHHHHHHHHHHHhC
Confidence 99999999988876553345544 345555556643
No 44
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=88.39 E-value=0.48 Score=39.91 Aligned_cols=46 Identities=20% Similarity=0.356 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti-~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||+....- .....+..++-+.+++.|+++.
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~ 76 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKII 76 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEE
Confidence 699999999999999999985211 0223345677888899999983
No 45
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=88.24 E-value=0.34 Score=42.61 Aligned_cols=110 Identities=13% Similarity=0.026 Sum_probs=76.1
Q ss_pred HHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc--c
Q 028948 71 FIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK--P 148 (201)
Q Consensus 71 ~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~--p 148 (201)
.+++-|+.++++|..|..|- |..-...++.+-+..+.+.++|.+.|-|.|-.--+.+.+-.++|+.+++. +.-. .
T Consensus 123 ~~~~~v~~a~~~g~~v~f~~--~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~~~ 199 (325)
T 3eeg_A 123 MAVAAVKQAKKVVHEVEFFC--EDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDN-VSNIDKA 199 (325)
T ss_dssp TTHHHHHHHHTTSSEEEEEE--ETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHH-CSCGGGS
T ss_pred HHHHHHHHHHHCCCEEEEEc--cccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHh-CCCCCce
Confidence 36688999999999987762 22223455577788888889999999999999999999999999999886 2210 2
Q ss_pred ccccccCC----------CCcccccccccccEEEecccCcCeeccccCCcee
Q 028948 149 KFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIE 190 (201)
Q Consensus 149 E~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~~~~ 190 (201)
.+++-+-+ ..+++|++ .| +.-=.|.=+-+.|+.+|
T Consensus 200 ~i~~H~Hnd~GlA~AN~laA~~aGa~-----~v--d~tv~GlGer~GN~~lE 244 (325)
T 3eeg_A 200 ILSAHCHNDLGLATANSLAALQNGAR-----QV--ECTINGIGERAGNTALE 244 (325)
T ss_dssp EEEECBCCTTSCHHHHHHHHHHHTCC-----EE--EEBGGGCCSTTCCCBHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHhCCC-----EE--EEecccccccccchhHH
Confidence 23333221 33667777 43 33334443467888876
No 46
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=88.06 E-value=0.28 Score=40.04 Aligned_cols=90 Identities=12% Similarity=0.046 Sum_probs=57.5
Q ss_pred EeeCccccccCh-hHHHHHHHHHHhCCce-ecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc-ccCC-----
Q 028948 58 KFSGGSHSLMPK-PFIEEVVKRAHQHDVY-VST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS-LEIP----- 128 (201)
Q Consensus 58 Kfg~GTs~l~p~-~~L~eKI~l~~~~gV~-v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGt-i~i~----- 128 (201)
|+|.-|..+.+. --+.+.++.++++|.. |-. +.+........+..++++.+.+++.|+...-++.-. ...+
T Consensus 2 klg~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 81 (286)
T 3dx5_A 2 KYSLCTISFRHQLISFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEK 81 (286)
T ss_dssp EEEEEGGGGTTSCCCHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHH
T ss_pred eEEEEeeeccCCCCCHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHH
Confidence 788888887652 2389999999999873 222 111111222233478899999999999988775321 1122
Q ss_pred -hhHHHHHHHHHHHCCCeEc
Q 028948 129 -EETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 129 -~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+...+.|+.|+..|-+..
T Consensus 82 ~~~~~~~~i~~A~~lG~~~v 101 (286)
T 3dx5_A 82 TIEKCEQLAILANWFKTNKI 101 (286)
T ss_dssp HHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHhCCCEE
Confidence 1344568888888887754
No 47
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=88.03 E-value=0.88 Score=38.73 Aligned_cols=99 Identities=11% Similarity=-0.001 Sum_probs=66.2
Q ss_pred hHHHHHHHhhcccccEEEeeCccc--------cccCh---hHHHHHHHHHHhCCceec--Ccc-H-HHHHHHhCCchHHH
Q 028948 41 NVLEDIFESMGQFVDGLKFSGGSH--------SLMPK---PFIEEVVKRAHQHDVYVS--TGD-W-AEHLIRNGPSAFKE 105 (201)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs--------~l~p~---~~L~eKI~l~~~~gV~v~--~Gt-l-fE~al~qg~~~~~e 105 (201)
..++..++. -+|.+-+...+| -...+ +.+++-|+.+|++|+.|. .++ + .|.....+++.+.+
T Consensus 83 ~~i~~a~~~---G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~ 159 (295)
T 1ydn_A 83 KGYEAAAAA---HADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVAS 159 (295)
T ss_dssp HHHHHHHHT---TCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHH
T ss_pred HHHHHHHHC---CCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHH
Confidence 344444443 466666665555 12222 335667999999999875 121 1 13223345556777
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHC
Q 028948 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~ 142 (201)
+++.+.++|.+.|=|.|-.--+.+++-.++|+.+++.
T Consensus 160 ~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~ 196 (295)
T 1ydn_A 160 VTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAI 196 (295)
T ss_dssp HHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHh
Confidence 7777779999999999866668888888999999876
No 48
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=87.58 E-value=3.5 Score=33.56 Aligned_cols=109 Identities=12% Similarity=0.184 Sum_probs=68.0
Q ss_pred HHHHHHHhhccc-ccEEEeeCccccccChhHHHHHHHHHHhCCceecCc-c------HH---HHHHHhCCchHHHHHHHH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-D------WA---EHLIRNGPSAFKEYVEDC 110 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G-t------lf---E~al~qg~~~~~eyl~~~ 110 (201)
.+++.|+.+.+. .|++=+......-+..+.+++.-++++++|+.+... + |. +....+.-+.+++.++.|
T Consensus 18 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a 97 (294)
T 3vni_A 18 DYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRL 97 (294)
T ss_dssp CHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 456666666655 777777755433345667999999999999977642 1 11 111111112688899999
Q ss_pred HHcCCCEEE--ecCCcc-----cCCh-hH-------HHHHHHHHHHCCCeEcccc
Q 028948 111 KQVGFDTIE--LNVGSL-----EIPE-ET-------LLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 111 k~lGFd~IE--ISdGti-----~i~~-~~-------r~~lI~~~~~~Gf~v~pE~ 150 (201)
++||.+.|= +..|.- ..+. +. ..++.+.+++.|+++..|-
T Consensus 98 ~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 152 (294)
T 3vni_A 98 YKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEV 152 (294)
T ss_dssp HHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 999999996 333321 1222 22 3345567788898876553
No 49
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=87.43 E-value=0.21 Score=40.43 Aligned_cols=88 Identities=14% Similarity=0.113 Sum_probs=56.4
Q ss_pred EEeeCccccccChhHHHHHHHHHHhCCce-ecCc-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC--ChhH-
Q 028948 57 LKFSGGSHSLMPKPFIEEVVKRAHQHDVY-VSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI--PEET- 131 (201)
Q Consensus 57 lKfg~GTs~l~p~~~L~eKI~l~~~~gV~-v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i--~~~~- 131 (201)
.|+|.-|..+ ++.-+.+.++.++++|.. |-.. .......... ..+++.+.+++.|+...-++-. ..+ ++++
T Consensus 4 Mk~~~~~~~~-~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~--~~~~~~~~l~~~gl~~~~~~~~-~~~~~~~~~~ 79 (281)
T 3u0h_A 4 MEPCLHPTLV-DETSLVLYLDLARETGYRYVDVPFHWLEAEAERH--GDAAVEAMFQRRGLVLANLGLP-LNLYDSEPVF 79 (281)
T ss_dssp CEEEECGGGT-TCCCHHHHHHHHHHTTCSEECCCHHHHHHHHHHH--CHHHHHHHHHTTTCEECCEECC-SCTTSCHHHH
T ss_pred chhhhcchhc-cCCCHHHHHHHHHHcCCCEEEecHHHHHHHhccc--CHHHHHHHHHHcCCceEEeccc-ccccCCCHHH
Confidence 5888888544 445599999999999983 3332 2222112222 6889999999999887554432 222 2222
Q ss_pred ------HHHHHHHHHHCCCeEcc
Q 028948 132 ------LLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 132 ------r~~lI~~~~~~Gf~v~p 148 (201)
..+.|+.+++.|-+...
T Consensus 80 ~~~~~~~~~~i~~A~~lG~~~v~ 102 (281)
T 3u0h_A 80 LRELSLLPDRARLCARLGARSVT 102 (281)
T ss_dssp HHHHHTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEE
Confidence 24588889998887543
No 50
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=87.10 E-value=2.7 Score=34.43 Aligned_cols=109 Identities=14% Similarity=0.129 Sum_probs=65.2
Q ss_pred HHHHHHHhhccc-ccEEEeeCccc------cccChhHHHHHHHHHHhCCceecC----cc----HH---HHHHHhCCchH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSH------SLMPKPFIEEVVKRAHQHDVYVST----GD----WA---EHLIRNGPSAF 103 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs------~l~p~~~L~eKI~l~~~~gV~v~~----Gt----lf---E~al~qg~~~~ 103 (201)
.+++.|+.+.+. +|.+=+.+... .-.+.+.+++.-++++++|+.+.. +. |. +....+.-+.+
T Consensus 31 ~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~ 110 (295)
T 3cqj_A 31 CWLERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIM 110 (295)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHH
Confidence 444555544433 77777765432 112456688999999999998752 11 11 11111111268
Q ss_pred HHHHHHHHHcCCCEEEecCCcc--cC-ChhH-------HHHHHHHHHHCCCeEcccc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSL--EI-PEET-------LLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti--~i-~~~~-------r~~lI~~~~~~Gf~v~pE~ 150 (201)
++.++.|++||.+.|=+..+.. .. .++. ..++.+.+++.|+++..|-
T Consensus 111 ~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn 167 (295)
T 3cqj_A 111 RKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEI 167 (295)
T ss_dssp HHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEEee
Confidence 9999999999999998864322 11 1222 3455566778898875543
No 51
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=87.09 E-value=0.73 Score=41.19 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=36.1
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHCCCeEcccccccc
Q 028948 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKFAVMF 154 (201)
Q Consensus 107 l~~~k~lGFd~IEISd--------Gti~i----------~~~~r~~lI~~~~~~Gf~v~pE~g~k~ 154 (201)
|+++++|||++|+++- |.-.. +.++..++|+.++++|++|.-.+=...
T Consensus 56 LdyL~~LGv~~I~l~Pi~~~~~~~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH 121 (475)
T 2z1k_A 56 LPYLLDLGVEAIYLNPVFASTANHRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNH 121 (475)
T ss_dssp HHHHHHHTCCEEEECCCEEESSTTCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred hHHHHHcCCCEEEECCCcCCCCCCCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 5677999999999983 21111 368999999999999999966554443
No 52
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=87.03 E-value=1 Score=38.71 Aligned_cols=96 Identities=19% Similarity=0.118 Sum_probs=65.8
Q ss_pred HHHHHHHhhcccccEEEeeCccccccCh-----------hHHHHHHHHHHhCCceec------CccHHHHHHHhCCchHH
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPSAFK 104 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~L~eKI~l~~~~gV~v~------~GtlfE~al~qg~~~~~ 104 (201)
.++..++. =+|.+-+-.++|-++.+ +.+++-++.+|++|+.|. .|.-++. ..+|+.+.
T Consensus 88 ~i~~a~~a---G~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~--~~~~~~~~ 162 (302)
T 2ftp_A 88 GFEAALES---GVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDG--DVDPRQVA 162 (302)
T ss_dssp HHHHHHHT---TCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB--CCCHHHHH
T ss_pred HHHHHHhC---CcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCC--CCCHHHHH
Confidence 44444443 46777776677655322 235888999999999883 2321111 22344566
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHC
Q 028948 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~ 142 (201)
++++.+.+.|.|.|=|.|-.--+.+.+-.++|+.+++.
T Consensus 163 ~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~ 200 (302)
T 2ftp_A 163 WVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASE 200 (302)
T ss_dssp HHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHh
Confidence 66666679999999999866667888888999999876
No 53
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=86.85 E-value=0.58 Score=39.02 Aligned_cols=36 Identities=11% Similarity=0.061 Sum_probs=29.3
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHH
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEE 74 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~e 74 (201)
.+....++++..++|+|++|+|.+-+.-+..+.+++
T Consensus 23 ~~~~a~~~v~~~~~~v~~~Kvg~~lf~~~G~~~v~~ 58 (228)
T 3m47_A 23 NRDDALRVTGEVREYIDTVKIGYPLVLSEGMDIIAE 58 (228)
T ss_dssp SHHHHHHHHHTTTTTCSEEEEEHHHHHHHCTHHHHH
T ss_pred CHHHHHHHHHHcCCcccEEEEcHHHHHhcCHHHHHH
Confidence 677889999999999999999987766566665654
No 54
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=86.75 E-value=0.46 Score=41.75 Aligned_cols=147 Identities=11% Similarity=0.028 Sum_probs=93.1
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHH
Q 028948 26 VTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKE 105 (201)
Q Consensus 26 lTmV~DkG~s~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~e 105 (201)
+.++..|+.. -.+.++...+ .-+|.+-+.. .+..-+..++-++.++++|+.+... +|.+....++.+.+
T Consensus 85 i~~l~~p~~~---~~~~i~~a~~---aGvd~v~I~~---~~s~~~~~~~~i~~ak~~G~~v~~~--~~~a~~~~~e~~~~ 153 (345)
T 1nvm_A 85 IATLLLPGIG---SVHDLKNAYQ---AGARVVRVAT---HCTEADVSKQHIEYARNLGMDTVGF--LMMSHMIPAEKLAE 153 (345)
T ss_dssp EEEEECBTTB---CHHHHHHHHH---HTCCEEEEEE---ETTCGGGGHHHHHHHHHHTCEEEEE--EESTTSSCHHHHHH
T ss_pred EEEEecCCcc---cHHHHHHHHh---CCcCEEEEEE---eccHHHHHHHHHHHHHHCCCEEEEE--EEeCCCCCHHHHHH
Confidence 4444456541 1334444444 3577776652 2333356899999999999976653 22233344567888
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEecc
Q 028948 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVARAP 175 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~ 175 (201)
..+.+.++|.+.|=+.|-+--+.+++-.++|+.++++ +.....+++.+.+ ..+++|++ . +++
T Consensus 154 ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~-~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~-----~--vd~ 225 (345)
T 1nvm_A 154 QGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAV-LKPETQVGMHAHHNLSLGVANSIVAVEEGCD-----R--VDA 225 (345)
T ss_dssp HHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHH-SCTTSEEEEECBCTTSCHHHHHHHHHHTTCC-----E--EEE
T ss_pred HHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHh-cCCCceEEEEECCCccHHHHHHHHHHHcCCC-----E--EEe
Confidence 8888999999999999988888899989999999987 2111223332211 34667777 3 333
Q ss_pred cCcCeeccccCCceee
Q 028948 176 RSTDKLFLASNPEIEV 191 (201)
Q Consensus 176 Res~~v~~~~~~~~~~ 191 (201)
-=.|.=+-+.||.+|.
T Consensus 226 tv~GlG~~aGN~~le~ 241 (345)
T 1nvm_A 226 SLAGMGAGAGNAPLEV 241 (345)
T ss_dssp BGGGCSSTTCBCBHHH
T ss_pred cchhccCCccCcCHHH
Confidence 3334334578888773
No 55
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=86.51 E-value=0.78 Score=40.07 Aligned_cols=46 Identities=13% Similarity=0.195 Sum_probs=34.6
Q ss_pred HHHHHHHHHcCCCEEEecCCcc--------------------cC-----ChhHHHHHHHHHHHCCCeEccc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSL--------------------EI-----PEETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti--------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE 149 (201)
++-.++++++||++|+||==+- .| +.++..+||+.++++|++|.-.
T Consensus 26 ~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~i~~~~Gt~~df~~lv~~aH~~Gi~VilD 96 (496)
T 4gqr_A 26 LECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYKLCTRSGNEDEFRNMVTRCNNVGVRIYVD 96 (496)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCceeCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 4555667899999999984211 11 3679999999999999999443
No 56
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=86.50 E-value=1.3 Score=36.86 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=27.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc------ccCChhHHHHHHHHHHHCCC
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGS------LEIPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGt------i~i~~~~r~~lI~~~~~~Gf 144 (201)
.+++.++.++++||+.||+.... ..++.++..++-+.+++.|+
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 67 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGI 67 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCC
Confidence 46677777777777777773221 12334566666677777777
No 57
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=86.48 E-value=1.6 Score=36.53 Aligned_cols=47 Identities=13% Similarity=0.246 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc--CCh----hHHHHHHHHHHHCCCeEcc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLE--IPE----ETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~--i~~----~~r~~lI~~~~~~Gf~v~p 148 (201)
..+..++.++++||+.||+...... .|. ++..++-+.+++.|+++..
T Consensus 36 ~~~~~~~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~ 88 (316)
T 3qxb_A 36 PDRLAGLVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIES 88 (316)
T ss_dssp HHHHHHHHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEE
Confidence 4566677889999999999866443 222 2566788888999999843
No 58
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=86.37 E-value=4.4 Score=34.06 Aligned_cols=101 Identities=16% Similarity=0.266 Sum_probs=63.5
Q ss_pred hHHHHHHHhhccc-ccEEEeeCccc-cccChhHHH-----------------HHHHHHHhC--CceecCccHHHHHHHhC
Q 028948 41 NVLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH--DVYVSTGDWAEHLIRNG 99 (201)
Q Consensus 41 ~~l~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~L~-----------------eKI~l~~~~--gV~v~~GtlfE~al~qg 99 (201)
..+.++++..-+. +|.|-+|.=-+ .+++...+. +-++-.+++ ++++-.=+...-++..
T Consensus 31 ~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~- 109 (268)
T 1qop_A 31 EQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNN- 109 (268)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTT-
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHh-
Confidence 4455555444444 99999986221 223444444 445555555 3333211333444444
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
..++|++.|.+.|.|.|=+. +++.++..++++.++++|+++.+
T Consensus 110 --g~~~~~~~~~~aGadgii~~----d~~~e~~~~~~~~~~~~g~~~i~ 152 (268)
T 1qop_A 110 --GIDAFYARCEQVGVDSVLVA----DVPVEESAPFRQAALRHNIAPIF 152 (268)
T ss_dssp --CHHHHHHHHHHHTCCEEEET----TCCGGGCHHHHHHHHHTTCEEEC
T ss_pred --hHHHHHHHHHHcCCCEEEEc----CCCHHHHHHHHHHHHHcCCcEEE
Confidence 46899999999999988886 45557778999999999998633
No 59
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=86.13 E-value=0.59 Score=37.45 Aligned_cols=42 Identities=19% Similarity=0.331 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||+..- . ..+..++-+.+++.|+++.
T Consensus 16 ~~~~~l~~~~~~G~~~vEl~~~-~---~~~~~~~~~~l~~~gl~~~ 57 (260)
T 1k77_A 16 PFIERFAAARKAGFDAVEFLFP-Y---NYSTLQIQKQLEQNHLTLA 57 (260)
T ss_dssp CGGGHHHHHHHHTCSEEECSCC-T---TSCHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHhCCCEEEecCC-C---CCCHHHHHHHHHHcCCceE
Confidence 5777788888888888888742 1 2234567777788888875
No 60
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=85.93 E-value=1.4 Score=40.89 Aligned_cols=130 Identities=11% Similarity=0.109 Sum_probs=87.9
Q ss_pred HHHHHhh-cccccEEEeeCccccccChhHHHHHHHHHHhCCceec-----CccHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 028948 44 EDIFESM-GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (201)
Q Consensus 44 ~DlLe~a-g~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~-----~GtlfE~al~qg~~~~~eyl~~~k~lGFd~ 117 (201)
+..++.+ ..=+|.+-+-..++-+ +.+++-|+.++++|..+. ..+ ...+++.+-+..+.+.++|.+.
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~---~ni~~~i~~ak~~G~~v~~~i~~~~~-----~~~~~e~~~~~a~~l~~~Gad~ 174 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDV---RNMQQALQAVKKMGAHAQGTLCYTTS-----PVHNLQTWVDVAQQLAELGVDS 174 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEECCCC-----TTCCHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCcCEEEEEEecCHH---HHHHHHHHHHHHCCCEEEEEEEeeeC-----CCCCHHHHHHHHHHHHHCCCCE
Confidence 4344433 3448888877655554 559999999999999762 222 1224456777788888999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEecccCcCeeccccCC
Q 028948 118 IELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDKLFLASNP 187 (201)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~ 187 (201)
|=|.|-.--+.+.+-.++|+.++++ + ...+++...+ ..+++|++ .|- +-=+|.=.-+.||
T Consensus 175 I~l~DT~G~~~P~~v~~lv~~l~~~-~--~~~i~~H~Hnd~GlAvAN~laAv~AGa~-----~VD--~ti~g~gertGN~ 244 (464)
T 2nx9_A 175 IALKDMAGILTPYAAEELVSTLKKQ-V--DVELHLHCHSTAGLADMTLLKAIEAGVD-----RVD--TAISSMSGTYGHP 244 (464)
T ss_dssp EEEEETTSCCCHHHHHHHHHHHHHH-C--CSCEEEEECCTTSCHHHHHHHHHHTTCS-----EEE--EBCGGGCSTTSCC
T ss_pred EEEcCCCCCcCHHHHHHHHHHHHHh-c--CCeEEEEECCCCChHHHHHHHHHHhCCC-----EEE--EeccccCCCCcCH
Confidence 9999988888888888999999886 3 2334444322 34778888 443 3333444457898
Q ss_pred ceee
Q 028948 188 EIEV 191 (201)
Q Consensus 188 ~~~~ 191 (201)
.+|-
T Consensus 245 ~lE~ 248 (464)
T 2nx9_A 245 ATES 248 (464)
T ss_dssp BHHH
T ss_pred HHHH
Confidence 8763
No 61
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=85.81 E-value=1.1 Score=40.16 Aligned_cols=44 Identities=16% Similarity=0.160 Sum_probs=33.7
Q ss_pred HHHHHHcCCCEEEecCCccc--------------C-----ChhHHHHHHHHHHHCCCeEcccc
Q 028948 107 VEDCKQVGFDTIELNVGSLE--------------I-----PEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~--------------i-----~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
|+++|+||+++|+|+==+-. + +.++..+||+.++++|++|.-.+
T Consensus 38 LdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 100 (549)
T 4aie_A 38 LDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDL 100 (549)
T ss_dssp HHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 56889999999998642211 1 35789999999999999995544
No 62
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=85.80 E-value=0.86 Score=41.90 Aligned_cols=134 Identities=10% Similarity=0.113 Sum_probs=85.0
Q ss_pred HHHHHHHhhcccccEEEeeCccccccCh-----------hHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHH
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDC 110 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~ 110 (201)
.++..+++- +|.+-+-..||-.+.+ +.+.+-++.++++|+.|..+ +|.++..+++.+-+.++.+
T Consensus 115 di~~A~~aG---~~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~--~eda~r~d~~~~~~v~~~~ 189 (423)
T 3ivs_A 115 DARVAVETG---VDGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFS--SEDSFRSDLVDLLSLYKAV 189 (423)
T ss_dssp HHHHHHHTT---CSEEEEEEEC-------------CHHHHHHHHHHHHHHTTTCEEEEE--EESGGGSCHHHHHHHHHHH
T ss_pred hHHHHHHcC---CCEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEE--EccCcCCCHHHHHHHHHHH
Confidence 445555542 5666666666554321 34556799999999988764 2333445555677778888
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEecccCcCe
Q 028948 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDK 180 (201)
Q Consensus 111 k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~ 180 (201)
.+.|.+.|-|.|-.--+.+.+-.++|+.+++. + ...+++.+.+ ..+.+|++ .| ++-=.|.
T Consensus 190 ~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~-~--~~~i~~H~Hnd~GlAvAN~laAv~aGa~-----~v--d~ti~Gl 259 (423)
T 3ivs_A 190 DKIGVNRVGIADTVGCATPRQVYDLIRTLRGV-V--SCDIECHFHNDTGMAIANAYCALEAGAT-----HI--DTSILGI 259 (423)
T ss_dssp HHHCCSEEEEEETTSCCCHHHHHHHHHHHHHH-C--SSEEEEEEBCTTSCHHHHHHHHHHTTCC-----EE--EEBGGGC
T ss_pred HHhCCCccccCCccCcCCHHHHHHHHHHHHhh-c--CCeEEEEECCCCchHHHHHHHHHHhCCC-----EE--EEecccc
Confidence 89999999999999888898888999998875 2 2234443322 33667777 43 3333333
Q ss_pred eccccCCcee
Q 028948 181 LFLASNPEIE 190 (201)
Q Consensus 181 v~~~~~~~~~ 190 (201)
=.-+.|+.+|
T Consensus 260 GERaGNa~Le 269 (423)
T 3ivs_A 260 GERNGITPLG 269 (423)
T ss_dssp SSTTCBCBHH
T ss_pred cCcccchhHH
Confidence 3356787776
No 63
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=85.28 E-value=1.6 Score=39.94 Aligned_cols=50 Identities=16% Similarity=0.112 Sum_probs=38.3
Q ss_pred HHHHHHHcCCCEEEecCCc--------------------ccCC-------hhHHHHHHHHHHHCCCeEccccccccC
Q 028948 106 YVEDCKQVGFDTIELNVGS--------------------LEIP-------EETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGt--------------------i~i~-------~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
=|+++++|||++|+||==+ -.+. .++..++|+.++++|++|.-.+=....
T Consensus 42 ~LdyLk~LGvt~IwL~Pi~e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~NHt 118 (527)
T 1gcy_A 42 QAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDVVPNHM 118 (527)
T ss_dssp HHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHhcCCCEEEeCCccccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEeecCc
Confidence 3678899999999998322 2344 789999999999999999665544443
No 64
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=84.92 E-value=0.52 Score=39.19 Aligned_cols=89 Identities=10% Similarity=0.008 Sum_probs=53.6
Q ss_pred EEeeCccccccChhHHHHHHHHHHhCCce-ecCc-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC--Ch---
Q 028948 57 LKFSGGSHSLMPKPFIEEVVKRAHQHDVY-VSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI--PE--- 129 (201)
Q Consensus 57 lKfg~GTs~l~p~~~L~eKI~l~~~~gV~-v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i--~~--- 129 (201)
.|+|.-|..+....-+.+.++.++++|.. |-.. ..+.. +...+...+++.+.+++.|+...-++- ...+ +.
T Consensus 23 ~klgi~~~~~~~~~~~~~~l~~a~~~G~~~vEl~~~~~~~-~~~~~~~~~~~~~~l~~~gl~i~~~~~-~~~~~~~~~~~ 100 (296)
T 2g0w_A 23 CPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVD-ALAAGLTDEDMLRILDEHNMKVTEVEY-ITQWGTAEDRT 100 (296)
T ss_dssp CCEEECGGGGTTTSCHHHHHHHHHHTTCSEEEEEHHHHHH-HHHTTCCHHHHHHHHHHTTCEEEEEEC-BCCCSSTTTCC
T ss_pred CCceeechhcCCCCCHHHHHHHHHHcCCCEEEeCHHHHHH-HHhcCCcHHHHHHHHHHcCCceEeehh-hhccccCChHH
Confidence 47888777776634488888888888862 2221 11111 111224678888888888888776654 3333 11
Q ss_pred ----hHHHHHHHHHHHCCCeEc
Q 028948 130 ----ETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 130 ----~~r~~lI~~~~~~Gf~v~ 147 (201)
+...+.|+.|++.|-+..
T Consensus 101 ~~~~~~~~~~i~~A~~lGa~~v 122 (296)
T 2g0w_A 101 AEQQKKEQTTFHMARLFGVKHI 122 (296)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEE
Confidence 123577788888877643
No 65
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=84.91 E-value=1.3 Score=39.62 Aligned_cols=50 Identities=12% Similarity=0.177 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHcCCCEEEecC------------Cc----ccC-----ChhHHHHHHHHHHHCCCeEccccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNV------------GS----LEI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISd------------Gt----i~i-----~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
-.++.++++++|||++|+++= |. -.+ +.++..++|+.++++|++|.-.+=
T Consensus 16 i~~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 86 (448)
T 1g94_A 16 VAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTL 86 (448)
T ss_dssp HHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 445566888999999999972 22 223 257899999999999999955443
No 66
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=84.90 E-value=2.2 Score=34.56 Aligned_cols=106 Identities=10% Similarity=0.089 Sum_probs=63.2
Q ss_pred HHHHHHHhhccc-ccEEEeeCccc------cccChhHHHHHHHHHHhCCc-eecC-ccHH------HHHHHhCCchHHHH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSH------SLMPKPFIEEVVKRAHQHDV-YVST-GDWA------EHLIRNGPSAFKEY 106 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs------~l~p~~~L~eKI~l~~~~gV-~v~~-Gtlf------E~al~qg~~~~~ey 106 (201)
.+++.++.+.++ +|.+=+ |... ...+.+.+++.-++++++|+ .++. +.++ +....+.-+.+.+.
T Consensus 15 ~~~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~ 93 (270)
T 3aam_A 15 GVAGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADD 93 (270)
T ss_dssp HHHHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHHHHHHHHHHHHH
Confidence 455665555432 555555 3211 12234568889999999999 5443 2221 11111111257899
Q ss_pred HHHHHHcCCCEEEecCCcccCCh----hHHHHHHHHHH-HCCCeEcccc
Q 028948 107 VEDCKQVGFDTIELNVGSLEIPE----ETLLRYVRLVK-SAGLKAKPKF 150 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~i~~----~~r~~lI~~~~-~~Gf~v~pE~ 150 (201)
++.|++||.+.|=+..|+. +. +...++.+.++ +.|.++..|-
T Consensus 94 i~~a~~lGa~~vv~h~g~~--~~~~~~~~l~~l~~~a~~~~gv~l~lEn 140 (270)
T 3aam_A 94 LEKAALLGVEYVVVHPGSG--RPERVKEGALKALRLAGVRSRPVLLVEN 140 (270)
T ss_dssp HHHHHHHTCCEEEECCCBS--CHHHHHHHHHHHHHHHTCCSSSEEEEEC
T ss_pred HHHHHHcCCCEEEECCCCC--CHHHHHHHHHHHHHhhcccCCCEEEEec
Confidence 9999999999999888876 32 22334555555 6787775543
No 67
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=84.75 E-value=4.5 Score=33.49 Aligned_cols=108 Identities=9% Similarity=0.101 Sum_probs=65.3
Q ss_pred HHHHHHHhhccc-ccEEEeeCccccccChhHHHHHHHHHHhCCceecCcc-------HH---HHHHHhCCchHHHHHHHH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-------WA---EHLIRNGPSAFKEYVEDC 110 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~Gt-------lf---E~al~qg~~~~~eyl~~~ 110 (201)
.+++ ++.+.+. +|++=+......-.....+++..+++.++|+.+...+ |. +....+.-+.+++.++.|
T Consensus 38 ~l~~-l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A 116 (309)
T 2hk0_A 38 FGPY-IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNV 116 (309)
T ss_dssp SHHH-HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHH
T ss_pred cHHH-HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3455 5554443 6777776543222233568888999999999776532 11 111111112689999999
Q ss_pred HHcCCCEEEecC----Cccc--C-C-hh-------HHHHHHHHHHHCCCeEcccc
Q 028948 111 KQVGFDTIELNV----GSLE--I-P-EE-------TLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 111 k~lGFd~IEISd----Gti~--i-~-~~-------~r~~lI~~~~~~Gf~v~pE~ 150 (201)
++||.+.|=+.- |... . + .+ ...++.+.+++.|+++..|-
T Consensus 117 ~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 171 (309)
T 2hk0_A 117 AKLDIHTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLGINLCIEV 171 (309)
T ss_dssp HHTTCCEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHcCCCEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 999999997653 5431 1 2 22 22355567778898886654
No 68
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=84.71 E-value=1.1 Score=40.29 Aligned_cols=48 Identities=8% Similarity=0.121 Sum_probs=35.7
Q ss_pred HHHHHHcCCCEEEecC--------Ccc-----cC-----ChhHHHHHHHHHHHCCCeEcccccccc
Q 028948 107 VEDCKQVGFDTIELNV--------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVMF 154 (201)
Q Consensus 107 l~~~k~lGFd~IEISd--------Gti-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~ 154 (201)
|+++++|||++|+++- |.- .+ +.++..++|+.++++|++|.-.+=...
T Consensus 62 LdyL~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH 127 (488)
T 2wc7_A 62 LDYIQNLGINAIYFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNH 127 (488)
T ss_dssp HHHHHHHTCCEEEESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred hHHHHHcCCCEEEECCCCCCCCCCCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 6678999999999973 111 11 257899999999999999966554443
No 69
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=84.63 E-value=1.2 Score=39.91 Aligned_cols=47 Identities=11% Similarity=0.109 Sum_probs=35.1
Q ss_pred HHHHHHHHHcCCCEEEecCCcc------------cC-----ChhHHHHHHHHHHHCCCeEcccc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSL------------EI-----PEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.+-|+++++||+++|+++-=+- .+ +.++..++|+.++++|++|.-.+
T Consensus 39 ~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~ 102 (424)
T 2dh2_A 39 KGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDL 102 (424)
T ss_dssp HTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3446788999999999983111 11 25899999999999999995443
No 70
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=84.59 E-value=11 Score=30.53 Aligned_cols=71 Identities=15% Similarity=0.268 Sum_probs=51.4
Q ss_pred HHHHHHHHhC-CceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 73 EEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 73 ~eKI~l~~~~-gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.+-|+-.+++ ++++..++.....+.. .++++++.|.+.|.|.|=+. +++.++..++++.+++.|.++.+-+
T Consensus 69 ~~~i~~i~~~~~~pv~~~~~~~~~~~~---~~~~~~~~~~~~Gad~v~~~----~~~~~~~~~~~~~~~~~g~~~~~~i 140 (248)
T 1geq_A 69 FWIVKEFRRHSSTPIVLMTYYNPIYRA---GVRNFLAEAKASGVDGILVV----DLPVFHAKEFTEIAREEGIKTVFLA 140 (248)
T ss_dssp HHHHHHHHTTCCCCEEEEECHHHHHHH---CHHHHHHHHHHHTCCEEEET----TCCGGGHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHhhCCCCEEEEeccchhhhc---CHHHHHHHHHHCCCCEEEEC----CCChhhHHHHHHHHHHhCCCeEEEE
Confidence 4455555544 6666666654545555 37899999999999999996 3455667789999999999886633
No 71
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=84.50 E-value=1.1 Score=39.53 Aligned_cols=49 Identities=18% Similarity=0.303 Sum_probs=36.8
Q ss_pred HHHHHHcCCCEEEecC--------C-----cccCC------hhHHHHHHHHHHHCCCeEccccccccC
Q 028948 107 VEDCKQVGFDTIELNV--------G-----SLEIP------EETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 107 l~~~k~lGFd~IEISd--------G-----ti~i~------~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
|+++++|||++|+++- | ...+. .++..++|+.++++|++|...+=....
T Consensus 27 ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~ 94 (405)
T 1ht6_A 27 VDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVINHR 94 (405)
T ss_dssp HHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcc
Confidence 5677999999999972 1 12333 578999999999999999665544443
No 72
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=84.50 E-value=1.2 Score=41.51 Aligned_cols=47 Identities=15% Similarity=0.156 Sum_probs=35.5
Q ss_pred HHHHHHcCCCEEEecC--------Cccc-----C-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 107 VEDCKQVGFDTIELNV--------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 107 l~~~k~lGFd~IEISd--------Gti~-----i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
|+++|+|||++|+++- |.-. + +.++..++|+.++++|++|.-.+=..
T Consensus 182 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 246 (588)
T 1j0h_A 182 LDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFN 246 (588)
T ss_dssp HHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 6788999999999983 2111 1 26899999999999999996554333
No 73
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=83.95 E-value=1.4 Score=39.11 Aligned_cols=50 Identities=14% Similarity=0.065 Sum_probs=37.0
Q ss_pred HHHHHHHcCCCEEEecCCc---------------cc-----C-----ChhHHHHHHHHHHHCCCeEccccccccC
Q 028948 106 YVEDCKQVGFDTIELNVGS---------------LE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGt---------------i~-----i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
-|+++++|||++|.||-=+ -. + +.++..++|+.++++|++|...+=....
T Consensus 35 ~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~NH~ 109 (449)
T 3dhu_A 35 DLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYNHT 109 (449)
T ss_dssp THHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred hHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 3567899999999998422 21 1 2489999999999999999665544433
No 74
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=83.60 E-value=1.4 Score=39.67 Aligned_cols=49 Identities=10% Similarity=0.139 Sum_probs=36.6
Q ss_pred HHHHHHcCCCEEEecCCcc---------------------cC-----ChhHHHHHHHHHHHCCCeEccccccccC
Q 028948 107 VEDCKQVGFDTIELNVGSL---------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti---------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
|+++|+|||++|+++-=+- .+ +.++..++|+.++++|++|.-.+=....
T Consensus 49 LdyL~~LGv~~I~l~Pi~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~ 123 (484)
T 2aaa_A 49 LDYIEGMGFTAIWISPITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHM 123 (484)
T ss_dssp HHHHHTTTCCEEEECCCEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBC
T ss_pred HHHHHhcCCCEEEeCccccCcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECcCCc
Confidence 6788999999999873221 11 3689999999999999999665544433
No 75
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=83.58 E-value=1.6 Score=39.08 Aligned_cols=48 Identities=10% Similarity=0.149 Sum_probs=35.7
Q ss_pred HHHHHHHcCCCEEEecCCcc---------------------cC-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 106 YVEDCKQVGFDTIELNVGSL---------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti---------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
-|+++++|||++|+++==+- .+ +.++..++|+.++++|++|.-.+=..
T Consensus 48 ~LdyL~~lGvt~I~l~Pi~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 121 (478)
T 2guy_A 48 KLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVAN 121 (478)
T ss_dssp THHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHhcCCCEEEeCCcccCCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 35678999999999973221 11 26889999999999999996554443
No 76
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=83.49 E-value=6.4 Score=31.82 Aligned_cols=101 Identities=13% Similarity=0.148 Sum_probs=64.3
Q ss_pred HHHHHHHhhccc-ccEEEeeCccccccChhHHHHHHHHHHhCCceecC-----ccHHH-----------HHHHhCCchHH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-----GDWAE-----------HLIRNGPSAFK 104 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~-----GtlfE-----------~al~qg~~~~~ 104 (201)
.+++.|+.+.+. .|.+=+.+- ++. .+++.-++++++|+.+.. +.|.. ..-.. +.++
T Consensus 24 ~~~~~l~~~~~~G~~~vEl~~~----~~~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~~~~ 96 (269)
T 3ngf_A 24 PFLERFRLAAEAGFGGVEFLFP----YDF-DADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFR--DNVD 96 (269)
T ss_dssp CHHHHHHHHHHTTCSEEECSCC----TTS-CHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHH--HHHH
T ss_pred CHHHHHHHHHHcCCCEEEecCC----ccC-CHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHH--HHHH
Confidence 455555554444 677777641 222 378888999999997663 22321 00111 2688
Q ss_pred HHHHHHHHcCCCEEEecCCccc--CCh--------hHHHHHHHHHHHCCCeEcccc
Q 028948 105 EYVEDCKQVGFDTIELNVGSLE--IPE--------ETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti~--i~~--------~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+.++.|++||.+.|=+..| .. .+. +...++.+.+++.|+++..|-
T Consensus 97 ~~i~~A~~lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 151 (269)
T 3ngf_A 97 IALHYALALDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLVEP 151 (269)
T ss_dssp HHHHHHHHTTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECC
T ss_pred HHHHHHHHcCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEee
Confidence 9999999999999999777 32 221 223345567788899887773
No 77
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=83.36 E-value=7.9 Score=32.03 Aligned_cols=107 Identities=12% Similarity=0.193 Sum_probs=63.9
Q ss_pred HHHHHHHhhcccccEEEeeCccccc------cChhHHHHHHHHHHhCCceecC-ccHH-H--------------------
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSL------MPKPFIEEVVKRAHQHDVYVST-GDWA-E-------------------- 93 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l------~p~~~L~eKI~l~~~~gV~v~~-Gtlf-E-------------------- 93 (201)
..=+.+..+| +|.+=+......+ ...+.+++.-++++++|+.+.. +..+ .
T Consensus 19 ~~l~~~~~~G--~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~~l 96 (340)
T 2zds_A 19 EVCRLARDFG--YDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARI 96 (340)
T ss_dssp HHHHHHHHHT--CSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCHHH
T ss_pred HHHHHHHHcC--CCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeeccccccccccccccccccccccccc
Confidence 3333444445 6777766321111 1234588889999999998864 3221 1
Q ss_pred -------HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC------C-------hhHH-------HHHHHHHHHCCCeE
Q 028948 94 -------HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI------P-------EETL-------LRYVRLVKSAGLKA 146 (201)
Q Consensus 94 -------~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i------~-------~~~r-------~~lI~~~~~~Gf~v 146 (201)
....+.-+.+++.++.|++||.+.|-+..|...- + .+.+ .++.+.+++.|+++
T Consensus 97 ~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l 176 (340)
T 2zds_A 97 WGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRF 176 (340)
T ss_dssp HTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEE
Confidence 1111111268889999999999999998776531 1 2222 34455677789888
Q ss_pred cccc
Q 028948 147 KPKF 150 (201)
Q Consensus 147 ~pE~ 150 (201)
..|-
T Consensus 177 ~lEn 180 (340)
T 2zds_A 177 AHEV 180 (340)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 5553
No 78
>4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A
Probab=83.24 E-value=1.1 Score=42.79 Aligned_cols=21 Identities=19% Similarity=0.169 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHcCCCEEEecC
Q 028948 102 AFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISd 122 (201)
...+-|.++|+||+++||+.=
T Consensus 287 ~~ie~L~yLk~LGVtaveLmP 307 (884)
T 4aio_A 287 AGMEHLRKLSDAGLTHVHLLP 307 (884)
T ss_dssp HHHHHHHHHHHHTCCEEEECC
T ss_pred hHHHHhHHHHHcCCCEEEecc
Confidence 456779999999999999964
No 79
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=83.23 E-value=1.9 Score=34.92 Aligned_cols=108 Identities=13% Similarity=0.128 Sum_probs=65.2
Q ss_pred HHHHHHhhccc-ccEEEeeCccccccChhHHHHHHHHHHhCCceecCcc-------HH---HHHHHhCCchHHHHHHHHH
Q 028948 43 LEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-------WA---EHLIRNGPSAFKEYVEDCK 111 (201)
Q Consensus 43 l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~Gt-------lf---E~al~qg~~~~~eyl~~~k 111 (201)
+++.++.+.+. +|++=+......-.+...+++..++++++|+.+..-+ +. +....+.-+.+++.++.|+
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~ 98 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCH 98 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45555554443 7888887655333333568899999999999765421 11 1111111126899999999
Q ss_pred HcCCCEEEecC----Cc--c--c-CChhHHH-------HHHHHHHHCCCeEcccc
Q 028948 112 QVGFDTIELNV----GS--L--E-IPEETLL-------RYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 112 ~lGFd~IEISd----Gt--i--~-i~~~~r~-------~lI~~~~~~Gf~v~pE~ 150 (201)
+||.+.|=++- |. . . -.++.+. ++.+.+++.|+++..|-
T Consensus 99 ~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 153 (290)
T 2qul_A 99 LLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEV 153 (290)
T ss_dssp HHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEEC
T ss_pred HcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 99999997642 43 1 1 1233333 34556677788876653
No 80
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=82.98 E-value=2.3 Score=38.19 Aligned_cols=50 Identities=8% Similarity=0.126 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
.+-|+++++|||++|+++==+- .+ +.++..++|+.++++|++|.-.+=..
T Consensus 24 ~~~LdyL~~LGvt~I~L~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 24 QNDAEHLSDIGITAVWIPPAYKGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp HHHHHHHHHHTCCEEEECCCSEESSTTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHhcCCCEEEcCccccCCCCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 3446788999999999983211 02 26899999999999999995544333
No 81
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=82.90 E-value=2.2 Score=38.94 Aligned_cols=47 Identities=11% Similarity=0.246 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCEEEecCCcc---------------c---------C-----ChhHHHHHHHHHHHCCCeEccccc
Q 028948 105 EYVEDCKQVGFDTIELNVGSL---------------E---------I-----PEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti---------------~---------i-----~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
+=|+++++|||++|+++==+- + + +.++..++|+.++++|++|.-.+=
T Consensus 28 ~~LdyLk~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~V 103 (515)
T 1hvx_A 28 NEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADVV 103 (515)
T ss_dssp HHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHhcCCCEEEeCCcccCCCCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 346788999999999983111 1 2 268999999999999999955443
No 82
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=82.81 E-value=2.3 Score=38.14 Aligned_cols=49 Identities=12% Similarity=0.136 Sum_probs=36.2
Q ss_pred HHHHHHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 105 EYVEDCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
+=|+++++|||++|+++==+- .+ +.++..++|+.++++|++|.-.+=..
T Consensus 29 ~~LdyL~~LGvt~IwL~Pi~~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 29 SDASNLKSKGITAVWIPPAWKGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 346788999999999983211 02 36899999999999999995544333
No 83
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=82.75 E-value=1.4 Score=37.57 Aligned_cols=68 Identities=19% Similarity=0.266 Sum_probs=49.4
Q ss_pred HHHHHHHHHhCCceecC---ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeE
Q 028948 72 IEEVVKRAHQHDVYVST---GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 72 L~eKI~l~~~~gV~v~~---GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
+++-|+..++.|-.+.. +..- ......++.+++..+.|++.|||+.+... .+...++.+.+++.|+.+
T Consensus 173 ~~~~i~~i~~~Gg~~VlAHP~r~~-----~~~~~~~~~l~~l~~~g~~giEv~~~~~~--~~~~~~~~~~a~~~gl~~ 243 (292)
T 2yb1_A 173 LEDAVGWIVGAGGMAVIAHPGRYD-----MGRTLIERLILDFQAAGGQGIEVASGSHS--LDDMHKFALHADRHGLYA 243 (292)
T ss_dssp HHHHHHHHHHTTCEEEECCGGGSS-----CCHHHHHHHHHHHHHTTCCEEEEEETTCC--HHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHHcCCEEEEECcCccc-----cchhhHHHHHHHHHhCCCCEEEEeCCCCC--HHHHHHHHHHHHHcCCce
Confidence 78999999987743333 3110 01012567778888899999999999875 556678999999999987
No 84
>1xim_A D-xylose isomerase; isomerase(intramolecular oxidoreductse); HET: XYL; 2.20A {Actinoplanes missouriensis} SCOP: c.1.15.3 PDB: 4xim_A 5xim_A* 6xim_A* 7xim_A 8xim_A* 9xim_A* 3xin_A 2xim_A* 5xin_A* 1xin_A* 1bhw_A* 2xin_A* 3xim_A*
Probab=82.70 E-value=1.3 Score=38.83 Aligned_cols=48 Identities=15% Similarity=0.176 Sum_probs=36.4
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcc-c--CC----hhHHHHHHHHHHHCCCeEc
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGSL-E--IP----EETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGti-~--i~----~~~r~~lI~~~~~~Gf~v~ 147 (201)
+-.+++.++.++++||+.||+++.-+ . .+ .++..++-+.+++.|+++.
T Consensus 32 ~~~~~e~l~~aa~~G~~~VEl~~~~l~p~~~~~~~~~~~~~~l~~~l~~~GL~i~ 86 (393)
T 1xim_A 32 ALDPVEAVHKLAEIGAYGITFHDDDLVPFGSDAQTRDGIIAGFKKALDETGLIVP 86 (393)
T ss_dssp CCCHHHHHHHHHHHTCSEEECBHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCC
T ss_pred CCCHHHHHHHHHHhCCCEEEeecccCCCccccccccHHHHHHHHHHHHHhCCEEE
Confidence 34788999999999999999983211 1 11 4567788888999999983
No 85
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=82.65 E-value=2.4 Score=38.01 Aligned_cols=49 Identities=12% Similarity=0.131 Sum_probs=36.1
Q ss_pred HHHHHHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 105 EYVEDCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
+=|+++++|||++|+++==+- .+ +.++..++|+.++++|++|.-.+=..
T Consensus 27 ~~LdyL~~LGvt~I~l~Pi~~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 27 DDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp HHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 346778999999999983111 02 36899999999999999995554433
No 86
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=82.61 E-value=1.6 Score=40.57 Aligned_cols=44 Identities=16% Similarity=0.257 Sum_probs=34.3
Q ss_pred HHHHHHcCCCEEEecCCc--------cc-----C-----ChhHHHHHHHHHHHCCCeEcccc
Q 028948 107 VEDCKQVGFDTIELNVGS--------LE-----I-----PEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGt--------i~-----i-----~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
|+++|+|||++|+++-=+ -. + +.++..++|+.++++|++|.-.+
T Consensus 178 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~ 239 (583)
T 1ea9_C 178 LDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDA 239 (583)
T ss_dssp HHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEEC
T ss_pred hHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 678899999999998321 11 1 36899999999999999995544
No 87
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=82.57 E-value=1.2 Score=40.62 Aligned_cols=66 Identities=12% Similarity=0.087 Sum_probs=45.7
Q ss_pred HHhCCceecCc-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----CChhHHHHHHHHHHHCCCeEcccccc
Q 028948 79 AHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----IPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 79 ~~~~gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~----i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
-+..||-|||+ ..+| ...+|++.++++||+.|=-|=-..+ --.+...++++.|++.||+|...+.-
T Consensus 26 M~~LGiSvYp~~~~~~--------~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp 96 (385)
T 1x7f_A 26 ERKLGISLYPEHSTKE--------KDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAP 96 (385)
T ss_dssp CCEEEEEECGGGSCHH--------HHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHheEEEEcCCCCCHH--------HHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCH
Confidence 34578888887 4655 2348999999999998865543322 22355678899999999999665553
No 88
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=82.51 E-value=6.6 Score=32.78 Aligned_cols=116 Identities=9% Similarity=0.037 Sum_probs=72.5
Q ss_pred hhHHHHHHHhhc--ccccEEEeeCccc--------cccChhHHHHHHHHHHhC-CceecCc---cHHHHHHHhCCchHHH
Q 028948 40 HNVLEDIFESMG--QFVDGLKFSGGSH--------SLMPKPFIEEVVKRAHQH-DVYVSTG---DWAEHLIRNGPSAFKE 105 (201)
Q Consensus 40 ~~~l~DlLe~ag--~yID~lKfg~GTs--------~l~p~~~L~eKI~l~~~~-gV~v~~G---tlfE~al~qg~~~~~e 105 (201)
+..+.+..+.+- ...|++-+.+++- ...+.+.+.+.++-.++. ++++..- +| ..+.+
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~---------~~~~~ 180 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNV---------TDIVP 180 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCS---------SCSHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCh---------HHHHH
Confidence 445555555555 5789998877632 234667788999988887 7755431 22 24677
Q ss_pred HHHHHHHcCCCEEEecCCcccC-------------------ChhH---HHHHHHHHHHC-CCeEccccccccCC---CCc
Q 028948 106 YVEDCKQVGFDTIELNVGSLEI-------------------PEET---LLRYVRLVKSA-GLKAKPKFAVMFNK---SDI 159 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~i-------------------~~~~---r~~lI~~~~~~-Gf~v~pE~g~k~~~---~dl 159 (201)
+.+.+.+.|.|+|-++++.... .... -.++++.+++. .+.|..-=|+.... .-+
T Consensus 181 ~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~l 260 (311)
T 1ep3_A 181 IAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEMY 260 (311)
T ss_dssp HHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHH
Confidence 8889999999999998743211 0111 24778777765 45555555555332 235
Q ss_pred ccccc
Q 028948 160 PSDRD 164 (201)
Q Consensus 160 ~ag~~ 164 (201)
.+|++
T Consensus 261 ~~GAd 265 (311)
T 1ep3_A 261 MAGAS 265 (311)
T ss_dssp HHTCS
T ss_pred HcCCC
Confidence 56666
No 89
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=82.34 E-value=1.7 Score=37.52 Aligned_cols=127 Identities=14% Similarity=0.045 Sum_probs=84.9
Q ss_pred ccEEEeeCccccccCh-----------hHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 028948 54 VDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 54 ID~lKfg~GTs~l~p~-----------~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISd 122 (201)
+|.+-+-..+|-++.+ +.+++-++.++++|..|..+- |.+-...++.+-++.+.+.++|.+.|-|.|
T Consensus 94 ~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~--~d~~~~~~~~~~~~~~~~~~~G~~~i~l~D 171 (293)
T 3ewb_X 94 SPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSP--EDATRSDRAFLIEAVQTAIDAGATVINIPD 171 (293)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEE--ETGGGSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEe--ccCCCCCHHHHHHHHHHHHHcCCCEEEecC
Confidence 6666666666544421 236788999999999887542 223344556778888999999999999999
Q ss_pred CcccCChhHHHHHHHHHHHCCCeEc--cccccccCC----------CCcccccccccccEEEecccCcCeeccccCCcee
Q 028948 123 GSLEIPEETLLRYVRLVKSAGLKAK--PKFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIE 190 (201)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~Gf~v~--pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~~~~ 190 (201)
-.--+.+.+-.++|+.+++. +.-. ..+++.+-+ ..+++|++ .| ++-=.|.=+-+.|++.|
T Consensus 172 T~G~~~P~~v~~lv~~l~~~-~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~-----~v--d~sv~GlGeraGN~~~E 243 (293)
T 3ewb_X 172 TVGYTNPTEFGQLFQDLRRE-IKQFDDIIFASHCHDDLGMATANALAAIENGAR-----RV--EGTINGIGERAGNTALE 243 (293)
T ss_dssp SSSCCCHHHHHHHHHHHHHH-CTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCC-----EE--EEBGGGCCTTTCBCBHH
T ss_pred CCCCCCHHHHHHHHHHHHHh-cCCccCceEEEEeCCCcChHHHHHHHHHHhCCC-----EE--EeeccccccccccHhHH
Confidence 99999999999999999886 2100 123333322 34677777 33 33333333457788776
No 90
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=82.30 E-value=0.88 Score=39.45 Aligned_cols=114 Identities=15% Similarity=0.187 Sum_probs=70.2
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhC-CceecCc-cHHHHHHHhCCchHHHHHHHHHHcCCCEEE
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIE 119 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~-gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IE 119 (201)
.+...+..+|- ++++=.+ .++.+.+++.++..++. +.++ | .++ +... .++++++.|.+.|+|.|+
T Consensus 27 ~la~av~~aG~-lG~i~~~-----~~~~~~~~~~i~~i~~~~~~p~--gvnl~---~~~~--~~~~~~~~a~~~g~d~V~ 93 (332)
T 2z6i_A 27 DLAGAVSKAGG-LGIIGGG-----NAPKEVVKANIDKIKSLTDKPF--GVNIM---LLSP--FVEDIVDLVIEEGVKVVT 93 (332)
T ss_dssp HHHHHHHHHTS-BEEEECT-----TCCHHHHHHHHHHHHHHCCSCE--EEEEC---TTST--THHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhCCC-cEEeCCC-----CCCHHHHHHHHHHHHHhcCCCE--EEEec---CCCC--CHHHHHHHHHHCCCCEEE
Confidence 45555666664 6666222 23556677777777753 1111 2 111 0122 588999999999999999
Q ss_pred ecCCcccCChhHHHHHHHHHHHCCCeEcccccc-ccCCCCcccccccccccEEEecccCcCe
Q 028948 120 LNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV-MFNKSDIPSDRDRAFGAYVARAPRSTDK 180 (201)
Q Consensus 120 ISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~-k~~~~dl~ag~~~a~g~~Vi~E~Res~~ 180 (201)
++.|. | .++++.+++.|+++.+.+.- +....-.++|+| +|++++++.|.
T Consensus 94 ~~~g~---p----~~~i~~l~~~g~~v~~~v~~~~~a~~~~~~GaD-----~i~v~g~~~GG 143 (332)
T 2z6i_A 94 TGAGN---P----SKYMERFHEAGIIVIPVVPSVALAKRMEKIGAD-----AVIAEGMEAGG 143 (332)
T ss_dssp ECSSC---G----GGTHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-----CEEEECTTSSE
T ss_pred ECCCC---h----HHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCC-----EEEEECCCCCC
Confidence 99883 3 24677777789888654321 111123356777 99999887654
No 91
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=82.12 E-value=2.4 Score=33.96 Aligned_cols=106 Identities=9% Similarity=0.071 Sum_probs=67.6
Q ss_pred HHHHHHHhhccc-ccEEEeeCccccccChhHHHHHHHHHHhCCceecC-c--cHH----HHHHHhCCchHHHHHHHHHHc
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G--DWA----EHLIRNGPSAFKEYVEDCKQV 113 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~-G--tlf----E~al~qg~~~~~eyl~~~k~l 113 (201)
.+++.|+.+.+. .|.+-+.... +. ...+++.-++++++|+.+.. . ..+ +....+.-+.+++.++.|+.|
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~--~~-~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~l 95 (275)
T 3qc0_A 19 GFAEAVDICLKHGITAIAPWRDQ--VA-AIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAEL 95 (275)
T ss_dssp CHHHHHHHHHHTTCCEEECBHHH--HH-HHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEecccc--cc-ccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 455666665554 6777665431 22 34488888999999998764 2 111 111111112689999999999
Q ss_pred CCCEEEecCCccc---CCh--------hHHHHHHHHHHHCCCeEcccc
Q 028948 114 GFDTIELNVGSLE---IPE--------ETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 114 GFd~IEISdGti~---i~~--------~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
|.+.|=+..|... .+. +...++.+.+++.|+++-.|-
T Consensus 96 G~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 143 (275)
T 3qc0_A 96 GADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEP 143 (275)
T ss_dssp TCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECC
T ss_pred CCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeE
Confidence 9999999887653 222 234456667788899886663
No 92
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=82.02 E-value=1.7 Score=41.57 Aligned_cols=52 Identities=19% Similarity=0.405 Sum_probs=39.9
Q ss_pred CchHHHHHHHHHHcCCCEEEec---------CCcccCCh-hHHHHHHHHHHHCCCeEccccc
Q 028948 100 PSAFKEYVEDCKQVGFDTIELN---------VGSLEIPE-ETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEIS---------dGti~i~~-~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
++..++-++.+|++||++|.++ .|..+.+- ++..++|+.++++||+|..+.+
T Consensus 36 ~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~la~e~GL~VIl~~g 97 (612)
T 3d3a_A 36 KEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRLAQENGMYVIVRPG 97 (612)
T ss_dssp GGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcChHHhcCCCCCccChhHHHHHHHHHHHHHHCCCEEEEecC
Confidence 4588888999999999999997 45444433 2345779999999999987765
No 93
>1bxb_A Xylose isomerase; xylose metabolism; 2.20A {Thermus thermophilus} SCOP: c.1.15.3 PDB: 1bxc_A
Probab=81.63 E-value=1.5 Score=38.38 Aligned_cols=47 Identities=19% Similarity=0.287 Sum_probs=35.9
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc---cCC----hhHHHHHHHHHHHCCCeEc
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGSL---EIP----EETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGti---~i~----~~~r~~lI~~~~~~Gf~v~ 147 (201)
..+++.++.++++||+.||+++.-+ ..+ .++..++.+.+++.|+++.
T Consensus 33 ~~~~e~l~~aa~~G~~~vEl~~~~~~p~~~~~~e~~~~~~~l~~~l~~~GL~i~ 86 (387)
T 1bxb_A 33 LDPVYVVHKLAELGAYGVNLHDEDLIPRGTPPQERDQIVRRFKKALDETGLKVP 86 (387)
T ss_dssp CCHHHHHHHHHHHTCSEEEEEHHHHSCTTCCTTHHHHHHHHHHHHHHHHTCBCC
T ss_pred CCHHHHHHHHHHhCCCEEEecCcccCCCCCChhhhHHHHHHHHHHHHHhCCEEE
Confidence 3688899999999999999983221 112 4567788889999999974
No 94
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=81.42 E-value=14 Score=29.31 Aligned_cols=109 Identities=17% Similarity=0.180 Sum_probs=64.7
Q ss_pred HHHHHHHhhccc-ccEEEee-Ccccc-ccChhHHHHHHHHHHhCCceecC-cc---HH---HHHHHhCCchHHHHHHHHH
Q 028948 42 VLEDIFESMGQF-VDGLKFS-GGSHS-LMPKPFIEEVVKRAHQHDVYVST-GD---WA---EHLIRNGPSAFKEYVEDCK 111 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg-~GTs~-l~p~~~L~eKI~l~~~~gV~v~~-Gt---lf---E~al~qg~~~~~eyl~~~k 111 (201)
.+++.|+.+.+. +|.+=+. ..... ......+++.-++++++|+.+.. +. |. +....+.-+.+++.++.|+
T Consensus 15 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~ 94 (278)
T 1i60_A 15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCK 94 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 344455544433 6777776 43211 11234578888999999998763 21 21 1111111126899999999
Q ss_pred HcCCCEEEecCCccc--CC-hhHH-------HHHHHHHHHCCCeEcccc
Q 028948 112 QVGFDTIELNVGSLE--IP-EETL-------LRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 112 ~lGFd~IEISdGti~--i~-~~~r-------~~lI~~~~~~Gf~v~pE~ 150 (201)
+||.+.|=+.-|... .+ ++.+ .++.+.+++.|+++..|-
T Consensus 95 ~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn 143 (278)
T 1i60_A 95 TLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEF 143 (278)
T ss_dssp HHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred HcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 999999998666542 34 2222 345556677888875543
No 95
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=81.41 E-value=2.4 Score=37.54 Aligned_cols=45 Identities=18% Similarity=0.198 Sum_probs=34.3
Q ss_pred HHHHHHcCCCEEEecCCc--------c-----cC-----ChhHHHHHHHHHHHCCCeEccccc
Q 028948 107 VEDCKQVGFDTIELNVGS--------L-----EI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGt--------i-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
|+++++|||++|+++-=+ - .+ +.++..++|+.++++|++|.-.+=
T Consensus 29 LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V 91 (441)
T 1lwj_A 29 VSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDLP 91 (441)
T ss_dssp HHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 567899999999997321 1 11 368999999999999999954443
No 96
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=81.17 E-value=5.7 Score=34.00 Aligned_cols=43 Identities=12% Similarity=0.122 Sum_probs=22.1
Q ss_pred HHHHHHHHHcCCCEEEecCCcc----------cCChhHHHHHHHHHHHCCCeE
Q 028948 104 KEYVEDCKQVGFDTIELNVGSL----------EIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti----------~i~~~~r~~lI~~~~~~Gf~v 146 (201)
++.++.+++.|++.+-++--+. ..+.+++++.++.+++.|+++
T Consensus 152 ~e~l~~L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v 204 (350)
T 3t7v_A 152 NATLLKAREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCV 204 (350)
T ss_dssp HHHHHHHHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEE
T ss_pred HHHHHHHHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeE
Confidence 3445555555555555443332 234455555556666655554
No 97
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=81.16 E-value=2 Score=40.35 Aligned_cols=46 Identities=13% Similarity=0.142 Sum_probs=35.3
Q ss_pred HHHHHHHHcCCCEEEecCCccc-------------C-----ChhHHHHHHHHHHHCCCeEcccc
Q 028948 105 EYVEDCKQVGFDTIELNVGSLE-------------I-----PEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti~-------------i-----~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+=|+++|+||+++|+++==+-. + +.++..+||+.++++|++|.-.+
T Consensus 243 ~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~ 306 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDG 306 (645)
T ss_dssp HTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEe
Confidence 3467889999999999742211 1 36889999999999999995544
No 98
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=80.91 E-value=3 Score=40.80 Aligned_cols=127 Identities=11% Similarity=0.049 Sum_probs=86.0
Q ss_pred ccccEEEeeCccccccChhHHHHHHHHHHhCCceec-----CccHHHHHHHh--CCchHHHHHHHHHHcCCCEEEecCCc
Q 028948 52 QFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWAEHLIRN--GPSAFKEYVEDCKQVGFDTIELNVGS 124 (201)
Q Consensus 52 ~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~-----~GtlfE~al~q--g~~~~~eyl~~~k~lGFd~IEISdGt 124 (201)
.=+|.+-+-..++ .-+.+++-++.++++|..+. +|.| |-.... +++.+-+..+.+.++|.+.|=|-|-.
T Consensus 209 ~Gvd~irIf~s~n---~l~~l~~~i~~ak~~G~~v~~~i~~~~d~-~dp~r~~~~~e~~~~~a~~l~~~Ga~~I~l~DT~ 284 (718)
T 3bg3_A 209 NGMDVFRVFDSLN---YLPNMLLGMEAAGSAGGVVEAAISYTGDV-ADPSRTKYSLQYYMGLAEELVRAGTHILCIKDMA 284 (718)
T ss_dssp HTCCEEEEECSSC---CHHHHHHHHHHHHTTTSEEEEEEECCSCT-TCTTCCTTCHHHHHHHHHHHHHHTCSEEEEECTT
T ss_pred cCcCEEEEEecHH---HHHHHHHHHHHHHHcCCeEEEEEEeeccc-cCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCcC
Confidence 3488888776444 44579999999999997643 2333 332211 33456666777778999999999999
Q ss_pred ccCChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEecccCcCeeccccCCceee
Q 028948 125 LEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIEV 191 (201)
Q Consensus 125 i~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~~~~~ 191 (201)
--+.+.+-.++|+.++++ +. ...+++...+ ..+++|++ ++++-=+|.=+-+.||.+|.
T Consensus 285 G~~~P~~v~~lV~~lk~~-~p-~~~I~~H~Hnd~GlAvANslaAveAGa~-------~VD~ti~GlGertGN~~lE~ 352 (718)
T 3bg3_A 285 GLLKPTACTMLVSSLRDR-FP-DLPLHIHTHDTSGAGVAAMLACAQAGAD-------VVDVAADSMSGMTSQPSMGA 352 (718)
T ss_dssp SCCCHHHHHHHHHHHHHH-ST-TCCEEEECCCTTSCHHHHHHHHHHTTCS-------EEEEBCGGGCSTTSCCBHHH
T ss_pred CCcCHHHHHHHHHHHHHh-CC-CCeEEEEECCCccHHHHHHHHHHHhCCC-------EEEecCcccccccCchhHHH
Confidence 999999988999999886 31 2233443322 34778888 34444455555689998874
No 99
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=80.83 E-value=2 Score=39.86 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=34.2
Q ss_pred HHHHHHcCCCEEEecC--------CcccC----------ChhHHHHHHHHHHHCCCeEcccc
Q 028948 107 VEDCKQVGFDTIELNV--------GSLEI----------PEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 107 l~~~k~lGFd~IEISd--------Gti~i----------~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
|+++|+|||++|+++- |.-.. +.++..++|+.++++|++|.-.+
T Consensus 179 LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~ 240 (585)
T 1wzl_A 179 LPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDA 240 (585)
T ss_dssp HHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 6788999999999983 11111 36899999999999999995544
No 100
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=80.70 E-value=2.1 Score=36.64 Aligned_cols=98 Identities=15% Similarity=0.104 Sum_probs=70.4
Q ss_pred hhHHHHHHHhhcccccEEEeeCccccccCh-----------hHHHHHHHHHHhCCceec------CccHHHHHHHhCCch
Q 028948 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPSA 102 (201)
Q Consensus 40 ~~~l~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~L~eKI~l~~~~gV~v~------~GtlfE~al~qg~~~ 102 (201)
...++..++. -+|.+-+...+|-.+.+ +.+++-|+.++++|+.|. .|--++ -..+++.
T Consensus 83 ~~~i~~a~~a---g~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~--~~~~~~~ 157 (298)
T 2cw6_A 83 LKGFEAAVAA---GAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYE--GKISPAK 157 (298)
T ss_dssp HHHHHHHHHT---TCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTT--BSCCHHH
T ss_pred HHhHHHHHHC---CCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC--CCCCHHH
Confidence 3455555554 46777776666644322 356778999999999884 231111 1224457
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHC
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~ 142 (201)
+.++.+.+.++|.+.|=|.|-.--+.+++-.++|+.+++.
T Consensus 158 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~ 197 (298)
T 2cw6_A 158 VAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQE 197 (298)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHh
Confidence 7788888899999999999988889999999999999886
No 101
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=80.43 E-value=2.2 Score=43.17 Aligned_cols=76 Identities=18% Similarity=0.307 Sum_probs=47.8
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCcc-HHH---------HH---HHhCCc----
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAE---------HL---IRNGPS---- 101 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~Gt-lfE---------~a---l~qg~~---- 101 (201)
|-..+..+.=..=+|||.+= -|. + +.|. -.-|+.||+|||+|. || +|| .+ +.++.+
T Consensus 227 Gg~~~~~Y~F~~WqyVD~fV-YfS-h-~IPp---~~winaAHrnGV~VL-GT~i~ew~~~~~~~~~~~~~L~~d~~g~~~ 299 (937)
T 3gdb_A 227 GGEEFKAYAFDYWQYLDSMV-FWE-G-LVPT---PDVIDAGHRNGVPVY-GTLFFNWSNSIADQERFAEALKQDADGSFP 299 (937)
T ss_dssp BBSCSCSCCCCCGGGCSEEE-ETT-C-SSCC---HHHHHHHHHTTCCEE-EEEEEEEECCHHHHHHHHHHTCCCTTSCCH
T ss_pred CCCCcCceeeeeccceeeee-ecc-c-ccCC---chHHHHHHhcCCeEE-EEEecCcccchhhHHHHHHHhccCccchhH
Confidence 33333333334557899773 253 3 4565 388999999999985 33 222 22 223321
Q ss_pred hHHHHHHHHHHcCCCE----EEec
Q 028948 102 AFKEYVEDCKQVGFDT----IELN 121 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~----IEIS 121 (201)
-.++.++.|+.+|||. +|..
T Consensus 300 ~A~KLveiAkyyGFDGWlINiE~~ 323 (937)
T 3gdb_A 300 IARKLVDMAKYYGYDGYFINQETT 323 (937)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred HHHHHHHHHHHcCcCceEeccccc
Confidence 3789999999999998 6664
No 102
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=80.23 E-value=18 Score=33.36 Aligned_cols=102 Identities=12% Similarity=0.113 Sum_probs=65.5
Q ss_pred HHHHHHHhhcccccEEEeeCcc-ccccChhHHHHHHHHHHhCCceecC--cc--HHHH----HHHhCC------------
Q 028948 42 VLEDIFESMGQFVDGLKFSGGS-HSLMPKPFIEEVVKRAHQHDVYVST--GD--WAEH----LIRNGP------------ 100 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GT-s~l~p~~~L~eKI~l~~~~gV~v~~--Gt--lfE~----al~qg~------------ 100 (201)
.++++++..| ++.+|+...- ....+.+.|++.++.++++|+.+.. .. ..+. +...|.
T Consensus 152 ~~~~l~~~~G--~~~iki~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G~~~~~~~~~~~p~ 229 (559)
T 2fty_A 152 QLQAAYNDYG--VSSVKMFMTYPGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLTDAYYHGVSRPS 229 (559)
T ss_dssp HHHHHHHHHC--CCEEEEESSSTTTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSTTHHHHTSCH
T ss_pred HHHHHHHHCC--CCEEEEEecCCCCcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcCCCChhhcccCCCH
Confidence 3445553445 7889976532 1456778899999999999987764 22 2222 233331
Q ss_pred ----chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 101 ----SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 101 ----~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
..+.+.+..++.+|.. +-|. -++.++=.++|+++++.|..|.+|.
T Consensus 230 ~~E~~av~~~i~la~~~g~~-vhi~----H~s~~~~~~~i~~ak~~G~~Vt~e~ 278 (559)
T 2fty_A 230 IVEGEATNRAITLATTMDTP-ILFV----HVSSPQAAEVIKQAQTKGLKVYAET 278 (559)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-EEEC----SCCCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCC-EEEE----cCCCHHHHHHHHHHHHcCCceEEee
Confidence 2456667778888866 3342 3344554799999999999885544
No 103
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=80.11 E-value=14 Score=31.90 Aligned_cols=116 Identities=15% Similarity=0.148 Sum_probs=74.7
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCC-ceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHD-VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~g-V~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEI 120 (201)
.+......+| ++.++=. ..++.+.+++.|+.+++.- .++--+.+. .+. .++++++.+.+.|.+.|.+
T Consensus 41 ~la~av~~aG-glG~i~~-----~~~~~~~l~~~i~~i~~~~~~p~gVnl~~----~~~--~~~~~~~~~~~~g~d~V~l 108 (326)
T 3bo9_A 41 TLAAAVSEAG-GLGIIGS-----GAMKPDDLRKAISELRQKTDKPFGVNIIL----VSP--WADDLVKVCIEEKVPVVTF 108 (326)
T ss_dssp HHHHHHHHTT-SBEEEEC-----TTCCHHHHHHHHHHHHTTCSSCEEEEEET----TST--THHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhCC-CcEEeCC-----CCCCHHHHHHHHHHHHHhcCCCEEEEEec----cCC--CHHHHHHHHHHCCCCEEEE
Confidence 4555556666 5666621 2245667888888888752 222112111 122 6789999999999999999
Q ss_pred cCCcccCChhHHHHHHHHHHHCCCeEcccccc-ccCCCCcccccccccccEEEecccCcCee
Q 028948 121 NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV-MFNKSDIPSDRDRAFGAYVARAPRSTDKL 181 (201)
Q Consensus 121 SdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~-k~~~~dl~ag~~~a~g~~Vi~E~Res~~v 181 (201)
+-|. | .++++.+++.|.++.+.+.- +....-.++|+| +|++++++.|.-
T Consensus 109 ~~g~---p----~~~~~~l~~~g~~v~~~v~s~~~a~~a~~~GaD-----~i~v~g~~~GG~ 158 (326)
T 3bo9_A 109 GAGN---P----TKYIRELKENGTKVIPVVASDSLARMVERAGAD-----AVIAEGMESGGH 158 (326)
T ss_dssp ESSC---C----HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-----CEEEECTTSSEE
T ss_pred CCCC---c----HHHHHHHHHcCCcEEEEcCCHHHHHHHHHcCCC-----EEEEECCCCCcc
Confidence 8773 4 35678888899998764421 111223456777 999999887653
No 104
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=80.11 E-value=2.4 Score=33.89 Aligned_cols=49 Identities=10% Similarity=0.106 Sum_probs=33.8
Q ss_pred hHHHHHHHHHHcCCCEEEe---cCCccc-------------C---ChhHHHHHHHHHHHCCCeEcccc
Q 028948 102 AFKEYVEDCKQVGFDTIEL---NVGSLE-------------I---PEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEI---SdGti~-------------i---~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.+++.|+.+|++||++|-| +++... . -.+...++++.|.++|++|..++
T Consensus 43 ~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~ 110 (351)
T 3vup_A 43 RIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCL 110 (351)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 6888899999999999987 222110 0 11233568889999999996554
No 105
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=80.11 E-value=1.7 Score=39.49 Aligned_cols=61 Identities=20% Similarity=0.255 Sum_probs=42.0
Q ss_pred CceecCc-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----CChhHHHHHHHHHHHCCCeEccccc
Q 028948 83 DVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----IPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 83 gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~----i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
||-|||+ .++| ...+|++.++++||+.|=-|=-..+ --.+...++++.|++.||++...+.
T Consensus 6 GiSvY~~~~~~~--------~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIs 71 (372)
T 2p0o_A 6 GISVFLGEEITN--------DTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDIS 71 (372)
T ss_dssp EEECCTTSCCCH--------HHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EEEEcCCCCCHH--------HHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 5667776 3443 3458999999999999866643322 2234556888999999999965554
No 106
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=80.07 E-value=15 Score=31.19 Aligned_cols=100 Identities=14% Similarity=0.119 Sum_probs=68.1
Q ss_pred HHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhC-CceecCcc----HHHHHHHh--CC----------chHHH
Q 028948 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGD----WAEHLIRN--GP----------SAFKE 105 (201)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~-gV~v~~Gt----lfE~al~q--g~----------~~~~e 105 (201)
.+.+++.-+ |+|=+|.|+..+-+++.+++.+...++. +++++--| -+|.|+.. |. +.+++
T Consensus 31 a~~~v~~GA---diIDIg~g~~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~iINdvs~~~d~~~~ 107 (262)
T 1f6y_A 31 ARRQEEGGA---RALDLNVGPAVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRAMINSTNAEREKVEK 107 (262)
T ss_dssp HHHHHHHTC---SEEEEBCC----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCEEEEEECSCHHHHHH
T ss_pred HHHHHHCCC---cEEEECCCCCCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCCEEEECCCCcccHHH
Confidence 344555445 5555688988888899999999999987 88888754 68888876 53 22447
Q ss_pred HHHHHHHcCCCEEEecCCcccCCh------hHHHHHHHHHHHCCCe
Q 028948 106 YVEDCKQVGFDTIELNVGSLEIPE------ETLLRYVRLVKSAGLK 145 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~i~~------~~r~~lI~~~~~~Gf~ 145 (201)
.++.+++.|...|=....--.+|. +...++++++.+.|+.
T Consensus 108 ~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 108 LFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp HHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 899999999988887642112232 2335778888999985
No 107
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=80.00 E-value=17 Score=28.84 Aligned_cols=104 Identities=13% Similarity=0.115 Sum_probs=65.1
Q ss_pred HHHHHHhhccc-ccEEEeeCccc--cccChhHHHHHHHHHHhCCceecC-cc--HH----HHHHHhCCchHHHHHHHHHH
Q 028948 43 LEDIFESMGQF-VDGLKFSGGSH--SLMPKPFIEEVVKRAHQHDVYVST-GD--WA----EHLIRNGPSAFKEYVEDCKQ 112 (201)
Q Consensus 43 l~DlLe~ag~y-ID~lKfg~GTs--~l~p~~~L~eKI~l~~~~gV~v~~-Gt--lf----E~al~qg~~~~~eyl~~~k~ 112 (201)
+++.++.+.++ .|.+=+..... ...+...+++.-++++++|+.+.. .+ .+ +. ..+ .+++.++.|++
T Consensus 21 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~-~~~---~~~~~i~~a~~ 96 (272)
T 2q02_A 21 IEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEE-VVK---KTEGLLRDAQG 96 (272)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHH-HHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHH-HHH---HHHHHHHHHHH
Confidence 34444433321 56666653221 222345588888999999998843 22 11 22 122 68999999999
Q ss_pred cCCCEEEecCCcccC-----C-hhHHHHHHHHHHHCCCeEcccc
Q 028948 113 VGFDTIELNVGSLEI-----P-EETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 113 lGFd~IEISdGti~i-----~-~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
||.+.|=+..|...- - .+...++.+.+++.|+++..|-
T Consensus 97 lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~ 140 (272)
T 2q02_A 97 VGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEP 140 (272)
T ss_dssp HTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECC
T ss_pred hCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 999999987665321 1 3444567778888999885553
No 108
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=79.46 E-value=15 Score=31.34 Aligned_cols=101 Identities=19% Similarity=0.215 Sum_probs=62.7
Q ss_pred hHHHHHHHhhcccccEEEeeCccc-cccChhHHH-----------------HHHHHHHhC-CceecCccHHHHHHHhCCc
Q 028948 41 NVLEDIFESMGQFVDGLKFSGGSH-SLMPKPFIE-----------------EVVKRAHQH-DVYVSTGDWAEHLIRNGPS 101 (201)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs-~l~p~~~L~-----------------eKI~l~~~~-gV~v~~GtlfE~al~qg~~ 101 (201)
....++++..-+.+|+|=+|.=-+ .+.+-..++ +-++-.++. ++++..=++...++..+
T Consensus 30 ~~~~~~~~~l~~~aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y~n~v~~~g-- 107 (271)
T 1ujp_A 30 EGFLQAVEEVLPYADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWG-- 107 (271)
T ss_dssp HHHHHHHHHHGGGCSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECCHHHHHHHC--
T ss_pred HHHHHHHHHHHhcCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEecCcHHHHhh--
Confidence 344555554444499999985332 222233333 334444444 33222215666666665
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
+++|++.|++.|+|.+=+. ++|.++..++++.++++|+...+
T Consensus 108 -~~~f~~~~~~aG~dGviv~----Dl~~ee~~~~~~~~~~~gl~~i~ 149 (271)
T 1ujp_A 108 -PERFFGLFKQAGATGVILP----DLPPDEDPGLVRLAQEIGLETVF 149 (271)
T ss_dssp -HHHHHHHHHHHTCCEEECT----TCCGGGCHHHHHHHHHHTCEEEC
T ss_pred -HHHHHHHHHHcCCCEEEec----CCCHHHHHHHHHHHHHcCCceEE
Confidence 7999999999999977665 55568888999999999987544
No 109
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=79.37 E-value=1.3 Score=38.84 Aligned_cols=46 Identities=24% Similarity=0.234 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-----CC--hhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLE-----IP--EETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~-----i~--~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||+....+. ++ .+...++-+.+++.|+++.
T Consensus 34 ~l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GL~i~ 86 (394)
T 1xla_A 34 DPVEAVHKLAELGAYGITFHDNDLIPFDATEAEREKILGDFNQALKDTGLKVP 86 (394)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHCCBCC
T ss_pred CHHHHHHHHHHcCCCEEEecCCccCcccCCchhhHHHHHHHHHHHHHcCCeEE
Confidence 3788899999999999999863221 11 3566778888899999974
No 110
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=79.21 E-value=1.8 Score=41.45 Aligned_cols=46 Identities=17% Similarity=0.226 Sum_probs=34.8
Q ss_pred HHHHHHHHcCCCEEEecC------------------Ccc-----------cCC-------hhHHHHHHHHHHHCCCeEcc
Q 028948 105 EYVEDCKQVGFDTIELNV------------------GSL-----------EIP-------EETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISd------------------Gti-----------~i~-------~~~r~~lI~~~~~~Gf~v~p 148 (201)
+-|+++|+|||++|+++= |.- ... .++..++|+.++++|++|.-
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 357888999999999982 110 121 48999999999999999954
Q ss_pred cc
Q 028948 149 KF 150 (201)
Q Consensus 149 E~ 150 (201)
.+
T Consensus 335 Dv 336 (718)
T 2e8y_A 335 DV 336 (718)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 111
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=78.97 E-value=4.4 Score=38.02 Aligned_cols=52 Identities=19% Similarity=0.253 Sum_probs=38.0
Q ss_pred HHHHHHHHHcCCCEEEecC----------Ccc-----cC-----ChhHHHHHHHHHHHCCCeEccccccccC
Q 028948 104 KEYVEDCKQVGFDTIELNV----------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISd----------Gti-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
++.++++++|||++|+++- |.- .+ +.++..++|+.++++|++|.-.+=....
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~ 230 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHF 230 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSC
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcc
Confidence 3445888999999999963 211 11 2588999999999999999665544443
No 112
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=78.91 E-value=1.3 Score=39.93 Aligned_cols=54 Identities=15% Similarity=0.146 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc------------------C-----ChhHHHHHHHHHHHCCCeEccccccccC
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLE------------------I-----PEETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~------------------i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
-.++-++++++|||++|+||==+-. + +.++..++|+.++++|++|.-.+=....
T Consensus 24 i~~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~ 100 (471)
T 1jae_A 24 IADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVINHM 100 (471)
T ss_dssp HHHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 4555578889999999999722111 1 2578999999999999999665544433
No 113
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=78.89 E-value=2.1 Score=37.91 Aligned_cols=50 Identities=14% Similarity=0.228 Sum_probs=37.1
Q ss_pred HHHHHHcCCCEEEecC------Ccc------------------cC-----ChhHHHHHHHHHHHCCCeEccccccccCC
Q 028948 107 VEDCKQVGFDTIELNV------GSL------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVMFNK 156 (201)
Q Consensus 107 l~~~k~lGFd~IEISd------Gti------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~ 156 (201)
++++++|||++|+++- +.. .+ +.++..++|+.++++|++|.-.+=.....
T Consensus 23 l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 23 MKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTT 101 (422)
T ss_dssp HHHHHHTTCSEEEECCCEEECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred HHHHHHcCCCEEEeCCccccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 5678999999999875 210 01 36889999999999999996655544443
No 114
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=78.83 E-value=12 Score=31.17 Aligned_cols=103 Identities=9% Similarity=0.094 Sum_probs=64.9
Q ss_pred HHHHHHHhhccc-ccEEEeeCccc-cccChhHHHHHHHHHHhCCceecCc--cHH--------------------HHHHH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSH-SLMPKPFIEEVVKRAHQHDVYVSTG--DWA--------------------EHLIR 97 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs-~l~p~~~L~eKI~l~~~~gV~v~~G--tlf--------------------E~al~ 97 (201)
.+++.|+.+.+. .|.+=+.+... ..++. .+++.-++++++|+.+... .++ +.. .
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~-~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~ 107 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGKGAIGGV-PMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKI-M 107 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEETTEETTE-EHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHH-H
T ss_pred CHHHHHHHHHHcCCCEEEeccccCcccCCC-CHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHH-H
Confidence 356666666555 67777754221 13333 3778888999999987542 221 221 2
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH-------HHHHHHHHCCCe--Eccc
Q 028948 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL-------RYVRLVKSAGLK--AKPK 149 (201)
Q Consensus 98 qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~-------~lI~~~~~~Gf~--v~pE 149 (201)
+ .+++.++.|++||.+.|=+..+.-.-+++.+. ++.+.+++.|++ +-.|
T Consensus 108 ~---~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~~l~~E 165 (303)
T 3l23_A 108 E---YWKATAADHAKLGCKYLIQPMMPTITTHDEAKLVCDIFNQASDVIKAEGIATGFGYH 165 (303)
T ss_dssp H---HHHHHHHHHHHTTCSEEEECSCCCCCSHHHHHHHHHHHHHHHHHHHHTTCTTCEEEE
T ss_pred H---HHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcceEEEc
Confidence 2 68999999999999999885332223444444 455677888888 6543
No 115
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=78.62 E-value=18 Score=31.79 Aligned_cols=96 Identities=11% Similarity=0.071 Sum_probs=63.1
Q ss_pred ccccEEEeeCcc--ccccChhHHHHHHHHHHhCCceecC---c-cHHHHH----HHhC----------------CchHHH
Q 028948 52 QFVDGLKFSGGS--HSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHL----IRNG----------------PSAFKE 105 (201)
Q Consensus 52 ~yID~lKfg~GT--s~l~p~~~L~eKI~l~~~~gV~v~~---G-tlfE~a----l~qg----------------~~~~~e 105 (201)
.-++.+|+.... ....+.+.+++.++.++++|..+.. . .+.+.. ...| ...+.+
T Consensus 144 ~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~ 223 (461)
T 3sfw_A 144 EGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQALAEGNTDPIYHAYTRPPEAEGEATGR 223 (461)
T ss_dssp SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHH
T ss_pred CCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhHhcccCCHHHHHHHHHH
Confidence 345677765432 1356778899999999999998765 2 344322 1112 124566
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
.+..++..|... -| ..++..+-+++|+.+++.|+.|..|.-.
T Consensus 224 ~~~la~~~g~~~-hi----~H~s~~~~l~~i~~ak~~G~~vt~e~~p 265 (461)
T 3sfw_A 224 AIALTALADAQL-YV----VHVSCADAVRRIAEAREKGWNVYGETCP 265 (461)
T ss_dssp HHHHHHHTTCEE-EE----CSCCSHHHHHHHHHHHHTTCEEEEEECH
T ss_pred HHHHHHHhCCCE-EE----EecCcHHHHHHHHHHHhcCCcEEEeecc
Confidence 778888888763 22 2344577789999999999998555543
No 116
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=78.61 E-value=11 Score=32.30 Aligned_cols=118 Identities=8% Similarity=0.039 Sum_probs=68.4
Q ss_pred hhHHHHHHHhhcccccEEEeeCcccc------ccChhHHHHHHHHHHhC----------CceecC---ccHHHHHHHhCC
Q 028948 40 HNVLEDIFESMGQFVDGLKFSGGSHS------LMPKPFIEEVVKRAHQH----------DVYVST---GDWAEHLIRNGP 100 (201)
Q Consensus 40 ~~~l~DlLe~ag~yID~lKfg~GTs~------l~p~~~L~eKI~l~~~~----------gV~v~~---GtlfE~al~qg~ 100 (201)
...+.+..+.+.++.|++=+-+++-. +...+.+.+.++-.++. ++++.. .+|- .
T Consensus 152 ~~~~~~aa~~~~~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~-----~-- 224 (336)
T 1f76_A 152 KDDYLICMEKIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLS-----E-- 224 (336)
T ss_dssp HHHHHHHHHHHGGGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCC-----H--
T ss_pred HHHHHHHHHHHhccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCC-----H--
Confidence 34455555555678899877775432 33445556666665543 454432 2221 1
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCC-------------------hhHHHHHHHHHHHC---CCeEccccccccCC--
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGSLEIP-------------------EETLLRYVRLVKSA---GLKAKPKFAVMFNK-- 156 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGti~i~-------------------~~~r~~lI~~~~~~---Gf~v~pE~g~k~~~-- 156 (201)
+.+.++.+.+.+.|.|.|.+|+++.... ...-+++++.+++. .+.|+.-=|+..+.
T Consensus 225 ~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da 304 (336)
T 1f76_A 225 EELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAA 304 (336)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHH
Confidence 1467778899999999999999875332 01224666666653 45555544555433
Q ss_pred -CCcccccc
Q 028948 157 -SDIPSDRD 164 (201)
Q Consensus 157 -~dl~ag~~ 164 (201)
+-+.+|++
T Consensus 305 ~~~l~~GAd 313 (336)
T 1f76_A 305 REKIAAGAS 313 (336)
T ss_dssp HHHHHHTCS
T ss_pred HHHHHCCCC
Confidence 33556666
No 117
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=78.60 E-value=3.9 Score=36.37 Aligned_cols=50 Identities=12% Similarity=0.166 Sum_probs=37.6
Q ss_pred chHHHHHHHHHHcCCCEEEecCCccc---C---------------C---hhHHHHHHHHHHHCCCeEccccc
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGSLE---I---------------P---EETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGti~---i---------------~---~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
+.+++.++.+|++||++|-++ ++-. + + .+...++|+.+.++|++|..++-
T Consensus 62 ~~~~~dl~~~k~~G~N~vR~~-~~d~~~~~~~~~~~~~~~~~g~~~e~~~~~lD~~l~~a~~~Gi~vil~l~ 132 (440)
T 1uuq_A 62 DRLAKELDNLKAIGVNNLRVL-AVSEKSEINSAVKPAVTNGFGNYDETLLQGLDYLLVELAKRDMTVVLYFN 132 (440)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-CCCBCCCSTTSCSSCSBSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEC-cccCCCCCcccccccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 468999999999999999998 2211 1 1 12233899999999999987653
No 118
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=78.27 E-value=3.7 Score=34.11 Aligned_cols=43 Identities=14% Similarity=0.286 Sum_probs=23.9
Q ss_pred HHHHHHHHHhCCc---ee--cCc-cHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 028948 72 IEEVVKRAHQHDV---YV--STG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 72 L~eKI~l~~~~gV---~v--~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~I 118 (201)
.++-++.+++.|+ .+ +.| .|-+.. . +.+++.+++|++.|+-+|
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~~~~~~~~~-~---~~ld~~v~~a~~~Gi~Vi 81 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSDGGQWEKDD-I---DTIREVIELAEQNKMVAV 81 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCCC-H---HHHHHHHHHHHTTTCEEE
T ss_pred hHHHHHHHHHcCCCEEEEEecCCCccCccH-H---HHHHHHHHHHHHCCCEEE
Confidence 4556777777775 22 112 132211 1 257777777777777665
No 119
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=78.23 E-value=2.7 Score=39.48 Aligned_cols=51 Identities=20% Similarity=0.140 Sum_probs=38.0
Q ss_pred HHHHHHHHcCCCEEEecC----------Cccc-----C-----ChhHHHHHHHHHHHCCCeEccccccccC
Q 028948 105 EYVEDCKQVGFDTIELNV----------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISd----------Gti~-----i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
+-|+++|+|||++|+++- |.-. + +.++..++|+.++++|++|.-.+=....
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~ 218 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHF 218 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred HHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 346888999999999862 2221 1 2588999999999999999766544443
No 120
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=78.11 E-value=7.9 Score=30.45 Aligned_cols=110 Identities=10% Similarity=0.058 Sum_probs=63.9
Q ss_pred hhH-HHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 028948 40 HNV-LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 40 ~~~-l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~I 118 (201)
+++ ++.+.+.-+ |++=+.. +..++.+++-++.++++|+.+...- -++....+.++.+.+.|.|.|
T Consensus 66 ~~~~~~~~~~~Ga---d~v~v~~----~~~~~~~~~~~~~~~~~g~~~~v~~-------~~~~t~~~~~~~~~~~g~d~i 131 (211)
T 3f4w_A 66 GHFESQLLFDAGA---DYVTVLG----VTDVLTIQSCIRAAKEAGKQVVVDM-------ICVDDLPARVRLLEEAGADML 131 (211)
T ss_dssp HHHHHHHHHHTTC---SEEEEET----TSCHHHHHHHHHHHHHHTCEEEEEC-------TTCSSHHHHHHHHHHHTCCEE
T ss_pred hHHHHHHHHhcCC---CEEEEeC----CCChhHHHHHHHHHHHcCCeEEEEe-------cCCCCHHHHHHHHHHcCCCEE
Confidence 344 455554433 5555542 2234568899999999998765210 012234566777888999999
Q ss_pred EecCCccc--CChhHHHHHHHHHHHC--CCeEccccccccCC--CCcccccc
Q 028948 119 ELNVGSLE--IPEETLLRYVRLVKSA--GLKAKPKFAVMFNK--SDIPSDRD 164 (201)
Q Consensus 119 EISdGti~--i~~~~r~~lI~~~~~~--Gf~v~pE~g~k~~~--~dl~ag~~ 164 (201)
=++.|+.. .+... .+.++++++. .+.+...-|+.... .-+++|++
T Consensus 132 ~v~~g~~g~~~~~~~-~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~Gad 182 (211)
T 3f4w_A 132 AVHTGTDQQAAGRKP-IDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPD 182 (211)
T ss_dssp EEECCHHHHHTTCCS-HHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTCCS
T ss_pred EEcCCCcccccCCCC-HHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCC
Confidence 88777431 11111 3455555553 57788888886211 22456666
No 121
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=78.09 E-value=7.5 Score=31.38 Aligned_cols=102 Identities=12% Similarity=0.145 Sum_probs=63.4
Q ss_pred HHHHHHhhccc-ccEEEeeCcccc--c--cChhHHHHHHHHHHhCCceecC-ccHH--------HHHHHhCCchHHHHHH
Q 028948 43 LEDIFESMGQF-VDGLKFSGGSHS--L--MPKPFIEEVVKRAHQHDVYVST-GDWA--------EHLIRNGPSAFKEYVE 108 (201)
Q Consensus 43 l~DlLe~ag~y-ID~lKfg~GTs~--l--~p~~~L~eKI~l~~~~gV~v~~-Gtlf--------E~al~qg~~~~~eyl~ 108 (201)
+++.|+.+.+. .|.+=+ |+... + .+...+++.-++++++|+.+.. ++++ +.+ . +.+++.++
T Consensus 17 ~~~~l~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~-~---~~~~~~i~ 91 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIEL-WGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKT-I---EKCEQLAI 91 (286)
T ss_dssp HHHHHHHHHHTTCCEEEE-EHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHH-H---HHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEE-cccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHH-H---HHHHHHHH
Confidence 44555544433 455555 22211 1 2345688888999999997664 2221 211 1 26888999
Q ss_pred HHHHcCCCEEEecCCccc---CChhH-------HHHHHHHHHHCCCeEccc
Q 028948 109 DCKQVGFDTIELNVGSLE---IPEET-------LLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 109 ~~k~lGFd~IEISdGti~---i~~~~-------r~~lI~~~~~~Gf~v~pE 149 (201)
.|+.||.+.|-+..|... .+++. ..++.+.+++.|+++..|
T Consensus 92 ~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 142 (286)
T 3dx5_A 92 LANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLE 142 (286)
T ss_dssp HHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEe
Confidence 999999999999877653 23333 334566778889888555
No 122
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=77.81 E-value=2.4 Score=35.35 Aligned_cols=91 Identities=11% Similarity=0.022 Sum_probs=62.1
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCcc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~Gt-lfE~al~qg~~~~~eyl~~~k~lGFd~ 117 (201)
.+....++++..++|+|++|++..-..-+..+. |+..+++|..+..-- +. -.|+....|++.+.++|.|.
T Consensus 15 ~l~~~~~~v~~~~~~v~~~Kv~~d~~~~~G~~~----v~~lr~~~~~v~lD~kl~-----Dip~t~~~~~~~~~~~Gad~ 85 (246)
T 2yyu_A 15 SKQEVERFLRPFAGTPLFVKVGMELYYQEGPAI----VAFLKEQGHAVFLDLKLH-----DIPNTVKQAMKGLARVGADL 85 (246)
T ss_dssp SHHHHHHHHGGGTTSCCEEEECHHHHHHHTHHH----HHHHHHTTCEEEEEEEEC-----SCHHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhcccccEEEeCHHHHHHhCHHH----HHHHHHCCCeEEEEeecc-----cchHHHHHHHHHHHhcCCCE
Confidence 556778889999999999999987654444443 444566655544331 21 12345667899999999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHH
Q 028948 118 IELNVGSLEIPEETLLRYVRLVKS 141 (201)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~ 141 (201)
|-|+-- ...+...++++.+++
T Consensus 86 vTvH~~---~g~~~l~~~~~~~~~ 106 (246)
T 2yyu_A 86 VNVHAA---GGRRMMEAAIEGLDA 106 (246)
T ss_dssp EEEEGG---GCHHHHHHHHHHHHH
T ss_pred EEEECC---CCHHHHHHHHHHHHh
Confidence 999853 234444578888887
No 123
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=77.78 E-value=6.4 Score=32.53 Aligned_cols=100 Identities=14% Similarity=0.181 Sum_probs=59.2
Q ss_pred HHHHHHHhhccc-ccEEEeeCcccc-----ccChhHHHHHHHHHHhCCc-eecC-ccHH--------HHHHHhCCchHHH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSHS-----LMPKPFIEEVVKRAHQHDV-YVST-GDWA--------EHLIRNGPSAFKE 105 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~-----l~p~~~L~eKI~l~~~~gV-~v~~-Gtlf--------E~al~qg~~~~~e 105 (201)
.+++.|+.+.++ +|.+=+...... ..+.+.+++.-++++++|+ .++. +.+. +....+.-+.+++
T Consensus 19 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~h~~~~~nl~s~d~~~~r~~~~~~~~~ 98 (303)
T 3aal_A 19 MLLAASEEAASYGANTFMIYTGAPQNTKRKSIEELNIEAGRQHMQAHGIEEIVVHAPYIINIGNTTNLDTFSLGVDFLRA 98 (303)
T ss_dssp THHHHHHHHHHTTCSEEEEESSCTTCCCCCCSGGGCHHHHHHHHHHTTCCEEEEECCTTCCTTCSSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEEcCCCCCccCCCCCCHHHHHHHHHHHHHcCCceEEEeccccccCCCCCcHHHHHHHHHHHHH
Confidence 466666665543 677776322211 1223558888899999999 4443 2221 2222222236888
Q ss_pred HHHHHHHcCCCEEEecCCccc--CChhHHHHHHHHHHH
Q 028948 106 YVEDCKQVGFDTIELNVGSLE--IPEETLLRYVRLVKS 141 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~--i~~~~r~~lI~~~~~ 141 (201)
.++.|++||.+.|=+--|+.. -+++.+.++++.+++
T Consensus 99 ~i~~A~~lGa~~vv~h~g~~~~~~~~~~~~~~~~~l~~ 136 (303)
T 3aal_A 99 EIERTEAIGAKQLVLHPGAHVGAGVEAGLRQIIRGLNE 136 (303)
T ss_dssp HHHHHHHHTCSEEEECCEECTTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHHH
Confidence 899999999999988777542 123445555555554
No 124
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=77.74 E-value=3 Score=41.54 Aligned_cols=49 Identities=16% Similarity=0.415 Sum_probs=38.0
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------------C-----cccCC---------hhHHHHHHHHHHHCCCeEccccc
Q 028948 103 FKEYVEDCKQVGFDTIELNV-----------------G-----SLEIP---------EETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISd-----------------G-----ti~i~---------~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
+.+-++++++|||++||++- | ...++ .++..++|+.++++|++|+-.+=
T Consensus 635 i~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 635 IAKNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp HHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 44558899999999999972 2 13443 78999999999999999955443
No 125
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=77.61 E-value=3.4 Score=38.03 Aligned_cols=49 Identities=24% Similarity=0.321 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCCEEEecC---------Ccc-----cC-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 105 EYVEDCKQVGFDTIELNV---------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISd---------Gti-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
+=|+++++|||++|++|- |.- .+ +.++..+||+.++++|++|.-.+=..
T Consensus 36 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~N 103 (557)
T 1zja_A 36 EKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVIN 103 (557)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 346788999999999972 211 11 36889999999999999995544333
No 126
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=77.56 E-value=2 Score=32.59 Aligned_cols=43 Identities=9% Similarity=0.075 Sum_probs=37.2
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
++.+.+.+++|.++|..+|=++.|+.+ .++.+.++++|+++.+
T Consensus 68 ~~~v~~~v~e~~~~g~k~v~~~~G~~~------~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 68 PQNQLSEYNYILSLKPKRVIFNPGTEN------EELEEILSENGIEPVI 110 (122)
T ss_dssp HHHHGGGHHHHHHHCCSEEEECTTCCC------HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEECCCCCh------HHHHHHHHHcCCeEEC
Confidence 357889999999999999999999852 4889999999999863
No 127
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=77.44 E-value=3.8 Score=36.54 Aligned_cols=47 Identities=19% Similarity=0.345 Sum_probs=35.0
Q ss_pred HHHHHHcCCCEEEecC-----------Ccc--------------cC-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 107 VEDCKQVGFDTIELNV-----------GSL--------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 107 l~~~k~lGFd~IEISd-----------Gti--------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
++++++|||++|+++- |.- .+ +.++..++|+.++++|++|.-.+=..
T Consensus 34 Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~N 110 (435)
T 1mxg_A 34 IPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADVVIN 110 (435)
T ss_dssp HHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECcc
Confidence 5677999999999972 211 13 37899999999999999995544333
No 128
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=77.27 E-value=4.5 Score=37.71 Aligned_cols=52 Identities=12% Similarity=0.123 Sum_probs=38.0
Q ss_pred HHHHHHHHHcCCCEEEecCCcc-----------------cC-----ChhHHHHHHHHHHHCCCeEccccccccC
Q 028948 104 KEYVEDCKQVGFDTIELNVGSL-----------------EI-----PEETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti-----------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
.+=|+++++|||++|.||-=+- .+ +.++..++|+.++++|++|.-.+=....
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~ 224 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHI 224 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCccc
Confidence 3346788999999999974321 11 3578999999999999999655544443
No 129
>1muw_A Xylose isomerase; atomic resolution, disorder; 0.86A {Streptomyces olivochromogenes} SCOP: c.1.15.3 PDB: 1s5m_A* 1s5n_A* 2gyi_A* 1xyb_A* 1xyc_A* 1xya_A* 1xyl_A 1xym_A* 1dxi_A 3gnx_A* 1gw9_A* 1xib_A 1xic_A* 1xid_A* 1xie_A* 1xif_A* 1xig_A* 1xih_A* 1xii_A* 1xij_A ...
Probab=77.18 E-value=1.7 Score=38.00 Aligned_cols=46 Identities=15% Similarity=0.276 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-C--C----hhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLE-I--P----EETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~-i--~----~~~r~~lI~~~~~~Gf~v~ 147 (201)
.+++.++.++++||+.||+....+. . . .++..++-+.+++.|+++.
T Consensus 34 ~~~e~l~~aa~~G~~~VEl~~~~~~p~~~~~~~~~~~~~~l~~~l~~~GL~i~ 86 (386)
T 1muw_A 34 DPVETVQRLAELGAHGVTFHDDDLIPFGSSDTERESHIKRFRQALDATGMTVP 86 (386)
T ss_dssp CHHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHHHHHHHHHHHHHHHHTCBCC
T ss_pred CHHHHHHHHHHcCCCEEEeeCCCCCcccCcccccHHHHHHHHHHHHHhCCeEE
Confidence 3788899999999999999853221 0 1 4567788888999999974
No 130
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=77.15 E-value=3.6 Score=35.93 Aligned_cols=69 Identities=19% Similarity=0.174 Sum_probs=52.4
Q ss_pred HHHHHHHHHhCCceec---CccHHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 72 IEEVVKRAHQHDVYVS---TGDWAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 72 L~eKI~l~~~~gV~v~---~GtlfE~al~qg-~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
+++-|++.|+.|-.+. |..+ ..+ ....++.+++.+++|++.||+..+. -+.+++.++.+.+++.||.+.
T Consensus 185 ~~eaI~~I~~aGGvaVLAHP~r~-----~~~r~~~~~~~l~~l~~~GldgIEv~~~~--~~~~~~~~~~~lA~~~gL~~t 257 (301)
T 3o0f_A 185 THEVIAAVKGAGGVVVAAHAGDP-----QRNRRLLSDEQLDAMIADGLDGLEVWHRG--NPPEQRERLLTIAARHDLLVT 257 (301)
T ss_dssp HHHHHHHHHHTTCEEEECSTTCT-----TTCSSCCCHHHHHHHHHHTCCEEEEESTT--SCHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHCCCEEEecChhhh-----ccccccCcHHHHHHHHHCCCCEEEEeCCC--CCHHHHHHHHHHHHHcCCceE
Confidence 8899999999986443 4321 001 1134567888999999999999864 478888899999999999874
No 131
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=77.12 E-value=2.7 Score=37.12 Aligned_cols=69 Identities=10% Similarity=0.132 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCC--------------cccCChhHHHHHHHHHHHCCCeEccccccccC-CCCcccccccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVG--------------SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFN-KSDIPSDRDRA 166 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdG--------------ti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~-~~dl~ag~~~a 166 (201)
..+.|++.+|+.||..| ++== -..|.-++-.++|+++++.||...+-+--... ..=.++|+|
T Consensus 109 ~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~~~eeA~amA~agpD-- 185 (286)
T 2p10_A 109 VMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVFSPEDAVAMAKAGAD-- 185 (286)
T ss_dssp CHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEECSHHHHHHHHHHTCS--
T ss_pred CHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHcCCC--
Confidence 68999999999999999 8766 34577888889999999999998664432222 223457777
Q ss_pred cccEEEeccc
Q 028948 167 FGAYVARAPR 176 (201)
Q Consensus 167 ~g~~Vi~E~R 176 (201)
.|.+|+=
T Consensus 186 ---iI~~h~g 192 (286)
T 2p10_A 186 ---ILVCHMG 192 (286)
T ss_dssp ---EEEEECS
T ss_pred ---EEEECCC
Confidence 8888775
No 132
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=76.79 E-value=8.6 Score=32.73 Aligned_cols=79 Identities=16% Similarity=0.272 Sum_probs=52.5
Q ss_pred ccEEEe-eCccccccChhHHHHHHHHHHhCCceec--C-ccHHHHHHHhCCchHHHHHHHHHHcC--CCEEEecCCccc-
Q 028948 54 VDGLKF-SGGSHSLMPKPFIEEVVKRAHQHDVYVS--T-GDWAEHLIRNGPSAFKEYVEDCKQVG--FDTIELNVGSLE- 126 (201)
Q Consensus 54 ID~lKf-g~GTs~l~p~~~L~eKI~l~~~~gV~v~--~-GtlfE~al~qg~~~~~eyl~~~k~lG--Fd~IEISdGti~- 126 (201)
++.+-| |+|.-.+.| .+.+.++.++++|+.+. + |++ ++.++.+++.| .+.|-||--+.+
T Consensus 142 ~~~v~~sggGEPll~~--~l~~ll~~~~~~g~~i~l~TNG~~------------~e~l~~L~~~g~~~~~l~isld~~~~ 207 (342)
T 2yx0_A 142 PTHAAISLSGEPMLYP--YMGDLVEEFHKRGFTTFIVTNGTI------------PERLEEMIKEDKLPTQLYVSITAPDI 207 (342)
T ss_dssp CCEEEECSSSCGGGST--THHHHHHHHHHTTCEEEEEECSCC------------HHHHHHHHHTTCCCSEEEEEECCSSH
T ss_pred CCEEEEcCCCcccchh--hHHHHHHHHHHCCCcEEEEcCCCc------------HHHHHHHHhcCCCCCEEEEEccCCCH
Confidence 566888 488888876 39999999999987544 3 443 34455566666 777777744431
Q ss_pred ------------CChhHHHHHHHHHHHCCCeE
Q 028948 127 ------------IPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 127 ------------i~~~~r~~lI~~~~~~Gf~v 146 (201)
-+.++..+.|+.+++.|+.+
T Consensus 208 e~~~~i~~~~~~~~~~~~~~~i~~l~~~g~~v 239 (342)
T 2yx0_A 208 ETYNSVNIPMIPDGWERILRFLELMRDLPTRT 239 (342)
T ss_dssp HHHHHHHCBSSSCHHHHHHHHHHHHTTCSSEE
T ss_pred HHHHHHhCCCcccHHHHHHHHHHHHHhCCCCE
Confidence 12455566677777777765
No 133
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=76.73 E-value=3.5 Score=37.14 Aligned_cols=44 Identities=27% Similarity=0.420 Sum_probs=35.8
Q ss_pred HHHHHHHHHc-CCCEEEecCCcc----cCChhHHHHHHHHHHHCCCeEc
Q 028948 104 KEYVEDCKQV-GFDTIELNVGSL----EIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 104 ~eyl~~~k~l-GFd~IEISdGti----~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
++.|+.++++ ||+.||++-..+ ..+.++..++-+.++++||.+.
T Consensus 33 ~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~ 81 (386)
T 3bdk_A 33 PVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEIT 81 (386)
T ss_dssp SSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 3478889999 999999985433 3566888899999999999974
No 134
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3
Probab=76.71 E-value=1.7 Score=36.00 Aligned_cols=92 Identities=7% Similarity=0.031 Sum_probs=62.5
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCcc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~Gt-lfE~al~qg~~~~~eyl~~~k~lGFd~ 117 (201)
.+....++++..++|+|++|++..-..-+..+.++ ..+++|..+..-- +. -.|+....|++.+.++|.|+
T Consensus 14 ~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~~v~----~l~~~~~~v~lD~kl~-----Dip~t~~~~~~~~~~~Gad~ 84 (239)
T 1dbt_A 14 SAEETLAFLAPFQQEPLFVKVGMELFYQEGPSIVK----QLKERNCELFLDLKLH-----DIPTTVNKAMKRLASLGVDL 84 (239)
T ss_dssp SHHHHHHHTGGGTTSCCEEEECHHHHHHHTHHHHH----HHHHTTCEEEEEEEEC-----SCHHHHHHHHHHHHTTTCSE
T ss_pred CHHHHHHHHHHhcccCcEEEECHHHHHHhCHHHHH----HHHHCCCcEEEEeccc-----cchHHHHHHHHHHHhcCCCE
Confidence 55677788889999999999998775545444443 4455555544331 21 12345667899999999999
Q ss_pred EEecCCcccCChhHHHHHHHHHHHC
Q 028948 118 IELNVGSLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~ 142 (201)
|-|+--. ..+...++++.+++.
T Consensus 85 vtvH~~~---g~~~l~~~~~~~~~~ 106 (239)
T 1dbt_A 85 VNVHAAG---GKKMMQAALEGLEEG 106 (239)
T ss_dssp EEEEGGG---CHHHHHHHHHHHHHH
T ss_pred EEEeCcC---CHHHHHHHHHHHHhh
Confidence 9998532 344445778888776
No 135
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=76.69 E-value=19 Score=32.48 Aligned_cols=94 Identities=11% Similarity=0.117 Sum_probs=58.8
Q ss_pred ccEEEe--eCccccccChhHHHHHHHHHHhCCceecC---c-cHHHH----HHHhCC----------------chHHHHH
Q 028948 54 VDGLKF--SGGSHSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEH----LIRNGP----------------SAFKEYV 107 (201)
Q Consensus 54 ID~lKf--g~GTs~l~p~~~L~eKI~l~~~~gV~v~~---G-tlfE~----al~qg~----------------~~~~eyl 107 (201)
+..+|+ ++......+.+.+++.++.++++|+.+.. . .+.+. +..+|. ..+.+-+
T Consensus 143 ~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i 222 (490)
T 3dc8_A 143 INTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAI 222 (490)
T ss_dssp CCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHH
Confidence 445565 33333445777788888888888876654 2 23321 111111 1355567
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 108 ~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
..++..|... -| .-++..+-.++|+.+++.|+.|..|.-.
T Consensus 223 ~la~~~g~~l-hi----~HvSt~~~~~li~~ak~~G~~Vt~e~~p 262 (490)
T 3dc8_A 223 MIADMAGCPV-YI----VHTSCEQAHEAIRRARAKGMRVFGEPLI 262 (490)
T ss_dssp HHHHHHTCCE-EE----SSCCSHHHHHHHHHHHHTTCCEEECCBH
T ss_pred HHHHHhCCcE-EE----EeCCCHHHHHHHHHHHHCCCeEEEEEch
Confidence 7777888653 22 3356688889999999999999777654
No 136
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=76.62 E-value=3.4 Score=38.24 Aligned_cols=49 Identities=22% Similarity=0.252 Sum_probs=36.0
Q ss_pred HHHHHHHHcCCCEEEecC---------Ccc-----cC-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 105 EYVEDCKQVGFDTIELNV---------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISd---------Gti-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
+=|+++++|||++|++|- |.- .+ +.++..++|+.++++|++|.-.+=..
T Consensus 49 ~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~V~N 116 (570)
T 1m53_A 49 EKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDVVIN 116 (570)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 336788999999999972 221 12 36899999999999999995544333
No 137
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=76.46 E-value=3.2 Score=38.19 Aligned_cols=48 Identities=19% Similarity=0.162 Sum_probs=35.6
Q ss_pred HHHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHCCCeEcccccc
Q 028948 105 EYVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
+=|+++++|||++|.++- |.-. + +.++..++|+.++++|++|.-.+=.
T Consensus 35 ~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~ 101 (543)
T 2zic_A 35 SKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDLVV 101 (543)
T ss_dssp HTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEECC
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 336788999999999972 2111 1 3678999999999999999554433
No 138
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=76.45 E-value=2.8 Score=34.44 Aligned_cols=67 Identities=15% Similarity=0.115 Sum_probs=49.6
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCCCC-cccccccccccEEEecccCc
Q 028948 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSD-IPSDRDRAFGAYVARAPRST 178 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~~d-l~ag~~~a~g~~Vi~E~Res 178 (201)
.+.|++.|.|+|-|-+---.+|.++-.++++.+++.|+.+..+++-...... ...+.+ +|-.|+|..
T Consensus 75 ~~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~Gl~~iv~v~~~~e~~~~~~~~~~-----~i~~~~~~~ 142 (219)
T 2h6r_A 75 AEAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLGLETIVCTNNINTSKAVAALSPD-----CIAVEPPEL 142 (219)
T ss_dssp HHHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHTCEEEEEESSSHHHHHHTTTCCS-----EEEECCCC-
T ss_pred HHHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHhCCCC-----EEEEEeccc
Confidence 7999999999999955544688888899999999999999888874322111 112334 888888874
No 139
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=76.33 E-value=23 Score=28.49 Aligned_cols=101 Identities=15% Similarity=0.171 Sum_probs=61.9
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCc---cH-HHHHHHhCCchHHHHHHHHHHcCCCE
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG---DW-AEHLIRNGPSAFKEYVEDCKQVGFDT 117 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G---tl-fE~al~qg~~~~~eyl~~~k~lGFd~ 117 (201)
..=+.+..+| +|.+-+. + .++ .+++.-++++++|+.+... ++ -+....+.-+.+++.++.|++||.+.
T Consensus 35 ~~l~~~~~~G--~~~vEl~-~---~~~--~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 106 (301)
T 3cny_A 35 QLLSDIVVAG--FQGTEVG-G---FFP--GPEKLNYELKLRNLEIAGQWFSSYIIRDGIEKASEAFEKHCQYLKAINAPV 106 (301)
T ss_dssp HHHHHHHHHT--CCEECCC-T---TCC--CHHHHHHHHHHTTCEECEEEEEECHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhC--CCEEEec-C---CCC--CHHHHHHHHHHCCCeEEEEeccCCCChhhHHHHHHHHHHHHHHHHHcCCCE
Confidence 3334444444 5666555 2 134 4788889999999987653 22 22211121236899999999999999
Q ss_pred EEecC------CcccC---------ChhHH-------HHHHHHHHHCCCeEcccc
Q 028948 118 IELNV------GSLEI---------PEETL-------LRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 118 IEISd------Gti~i---------~~~~r-------~~lI~~~~~~Gf~v~pE~ 150 (201)
|=+.. |...- .++.+ .++.+.+++.|+++..|-
T Consensus 107 v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~ 161 (301)
T 3cny_A 107 AVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHH 161 (301)
T ss_dssp EEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEec
Confidence 98753 54311 23333 356677788899885553
No 140
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=76.21 E-value=3.4 Score=39.28 Aligned_cols=46 Identities=20% Similarity=0.245 Sum_probs=35.1
Q ss_pred HHHHHHHcCCCEEEecCCcc-------------cC-----ChhHHHHHHHHHHHCCCeEccccc
Q 028948 106 YVEDCKQVGFDTIELNVGSL-------------EI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti-------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
=|+++++|||++|.++-=+- .+ +.++..+||+.++++|++|.-.+=
T Consensus 270 kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V 333 (696)
T 4aee_A 270 HIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDIT 333 (696)
T ss_dssp THHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEecc
Confidence 36788999999999984221 11 368999999999999999955443
No 141
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=76.20 E-value=4.1 Score=38.55 Aligned_cols=48 Identities=19% Similarity=0.325 Sum_probs=36.3
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Ccc-----cC-----ChhHHHHHHHHHHHCCCeEcccc
Q 028948 103 FKEYVEDCKQVGFDTIELNV-----------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISd-----------Gti-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+.+-|+++++|||++|+|+- |.- .+ +.++..++|+.++++|++|.-.+
T Consensus 108 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~ 176 (644)
T 3czg_A 108 VAERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADF 176 (644)
T ss_dssp HHHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 44557888999999999963 211 12 25799999999999999995443
No 142
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=76.15 E-value=3.8 Score=36.11 Aligned_cols=80 Identities=11% Similarity=0.084 Sum_probs=53.3
Q ss_pred cChhHHHHHHHHHHhCCceecC--ccHH--HHHHHh-CCchHH-HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 028948 67 MPKPFIEEVVKRAHQHDVYVST--GDWA--EHLIRN-GPSAFK-EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV~v~~--Gtlf--E~al~q-g~~~~~-eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~ 140 (201)
++...+++-|.-+|++|++|.. |||- |.+-.. ..+.|. .|.+.+++.|||.|.|.=-.-.. .+.+.+.++.++
T Consensus 58 ~~~~~~~~~I~~~q~~G~kVllSiGGa~Gs~~~~s~~~~~~~a~~~~~~i~~ygldGIDfDiE~~~~-~d~~~~aL~~l~ 136 (311)
T 2dsk_A 58 IPLEKFVDEVRELREIGGEVIIAFGGAVGPYLCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAGID-ADKLADALLIVQ 136 (311)
T ss_dssp BCGGGGHHHHHHHHTTTCEEEEEEEESSCCCHHHHCSSHHHHHHHHHHHHHHHTCSEEEEEECSCCC-HHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHCCCeEEEEecCCCCccccccccCHHHHHHHHHHHHHHhCCCcEEEeccCCcc-HHHHHHHHHHHH
Confidence 4456689999999999997664 6542 222221 222343 48899999999999876332222 368888888887
Q ss_pred HC--CCeEc
Q 028948 141 SA--GLKAK 147 (201)
Q Consensus 141 ~~--Gf~v~ 147 (201)
+. ++++.
T Consensus 137 ~~~p~~~vs 145 (311)
T 2dsk_A 137 RERPWVKFS 145 (311)
T ss_dssp HHSTTCEEE
T ss_pred hhCCCcEEE
Confidence 75 56663
No 143
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=76.05 E-value=2 Score=37.52 Aligned_cols=60 Identities=18% Similarity=0.203 Sum_probs=43.0
Q ss_pred HHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEec------CCcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 79 AHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN------VGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 79 ~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEIS------dGti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+.+||+..|.- .| ..++.++.+|++|+++|-|. .|.-+ .+.-+++++.|++.||+|...+
T Consensus 15 ~e~~g~~~~~~--------~G--~~~d~~~ilk~~G~N~VRi~~w~~P~~g~~~--~~~~~~~~~~A~~~GlkV~ld~ 80 (332)
T 1hjs_A 15 EERAGVSYKNT--------NG--NAQPLENILAANGVNTVRQRVWVNPADGNYN--LDYNIAIAKRAKAAGLGVYIDF 80 (332)
T ss_dssp HHHTTCCCBCT--------TS--CBCCHHHHHHHTTCCEEEEEECSSCTTCTTS--HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHcCCEEECC--------CC--CcccHHHHHHHCCCCEEEEeeeeCCCCCcCC--HHHHHHHHHHHHHCCCEEEEEe
Confidence 55677765541 12 23456788899999999994 44333 4667789999999999997764
No 144
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=75.98 E-value=5.6 Score=33.39 Aligned_cols=18 Identities=33% Similarity=0.674 Sum_probs=10.4
Q ss_pred HHHHHHHHHcCCCEEEec
Q 028948 104 KEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEIS 121 (201)
++.++.+|++||++|-|+
T Consensus 44 ~~d~~~l~~~G~n~vRi~ 61 (320)
T 3nco_A 44 DEYFKIIKERGFDSVRIP 61 (320)
T ss_dssp HHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHCCCCEEEEe
Confidence 455555566666666654
No 145
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=75.97 E-value=3.8 Score=38.86 Aligned_cols=46 Identities=26% Similarity=0.168 Sum_probs=34.6
Q ss_pred HHHHHHcCCCEEEecCCcc----------------------cC-----ChhHHHHHHHHHHHCCCeEcccccc
Q 028948 107 VEDCKQVGFDTIELNVGSL----------------------EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti----------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
|+++++|||++|.||==+- .+ +.++..+||+.++++|++|.-.+=.
T Consensus 58 LdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~ 130 (686)
T 1qho_A 58 LPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDFVP 130 (686)
T ss_dssp HHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred hHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 5677999999999984221 11 2578999999999999999554433
No 146
>3eww_A Ompdecase, orotidine-5'-phosphate decarboxylase; TIM barrel, unusual catalysis, disease mutati glycosyltransferase, lyase, multifunctional enzyme; HET: U1P; 1.10A {Homo sapiens} PDB: 2qcl_A* 2qcm_A* 3ewu_A* 2qcf_A* 3ex6_A* 3ex4_A* 2qcd_A* 2qcc_A 2qcg_A* 2qch_A* 2qcn_A* 2qce_A* 3ewz_A* 3ex1_A* 3ex2_A* 3ex3_A* 3ex0_A* 3ex5_A* 3l0k_A* 3l0n_A* ...
Probab=75.78 E-value=4.4 Score=34.80 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=40.4
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecC
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST 88 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~ 88 (201)
......++++..++|++++|.|+--..-+..+.+++..++++.+|..|..
T Consensus 42 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~v~~L~~~a~~~g~~Vfl 91 (260)
T 3eww_A 42 LARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIFE 91 (260)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhcCCeEEE
Confidence 67788999999999999999997766666777888887887777766553
No 147
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted, oxazoline, NAG-thiazoline, substrate-participation; 1.40A {Streptococcus pneumoniae} PDB: 2w92_A*
Probab=75.56 E-value=3.4 Score=39.96 Aligned_cols=86 Identities=17% Similarity=0.316 Sum_probs=54.3
Q ss_pred cccccEEEeeCccccccChhHHHHHHHHHHhCCceecC--------c-c---HHHHHHHhCC----chHHHHHHHHHHcC
Q 028948 51 GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST--------G-D---WAEHLIRNGP----SAFKEYVEDCKQVG 114 (201)
Q Consensus 51 g~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~--------G-t---lfE~al~qg~----~~~~eyl~~~k~lG 114 (201)
=+|||..=. | +-|.|. ..-|+.||+|||+|.. | + |++.++.++. .-+++.++.|+.+|
T Consensus 88 W~yvD~fvy-f--h~l~P~---~~widaAHrnGV~VlGT~~fe~~~~~~~~~~~~~lL~~~~~~~~~~a~kLv~la~~yG 161 (653)
T 2w91_A 88 WQYLDSMVF-W--EGLVPT---PDVIDAGHRNGVPVYGTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYG 161 (653)
T ss_dssp GGGCSEEEE-T--TCSSCC---HHHHHHHHHTTCCEEEEEEEEEECCHHHHHHHHHHTCCCTTSCCHHHHHHHHHHHHHT
T ss_pred ccccceeec-c--cccCCC---cHHHHHHHHCCCEEEEEEecCcccCCcHHHHHHHHhccCccchHHHHHHHHHHHHHhC
Confidence 368886542 5 555443 5789999999998872 1 1 5666664432 23799999999999
Q ss_pred CCEEEecCCcc-cCChh---HHHHHHHHHHHC
Q 028948 115 FDTIELNVGSL-EIPEE---TLLRYVRLVKSA 142 (201)
Q Consensus 115 Fd~IEISdGti-~i~~~---~r~~lI~~~~~~ 142 (201)
||.+=|+-=+- .++.+ ....+++.+++.
T Consensus 162 FDGw~IN~E~~~~~~~~~~~~l~~F~~~L~~~ 193 (653)
T 2w91_A 162 YDGYFINQETTGDLVKPLGEKMRQFMLYSKEY 193 (653)
T ss_dssp CCEEEEEEEECSTTTGGGHHHHHHHHHHHHHH
T ss_pred CCceEEeecccCCCCHHHHHHHHHHHHHHHHH
Confidence 99876654431 13333 333455555443
No 148
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=75.52 E-value=5.6 Score=31.86 Aligned_cols=122 Identities=11% Similarity=0.078 Sum_probs=65.7
Q ss_pred CceeEecCCCCCCcc--hhHHHHHHHhhccc-ccEEEeeCccccccChhHHHHHHHHHHhC-CceecCccHHHHHHHhC-
Q 028948 25 GVTEMRSPHYTLSSS--HNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNG- 99 (201)
Q Consensus 25 GlTmV~DkG~s~~~g--~~~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~L~eKI~l~~~~-gV~v~~GtlfE~al~qg- 99 (201)
|...++|-.+ . ++..+.+.+.+.+. .|++=+-. ....+ .++.++++ ||.+.|.|-.|.... .
T Consensus 51 ~~~v~~D~kl----~DI~~t~~~~v~~~~~~Gad~vtvh~----~~g~~----~i~~~~~~~gv~vl~~t~~~~~~~-~~ 117 (208)
T 2czd_A 51 GVEIIADLKL----ADIPNTNRLIARKVFGAGADYVIVHT----FVGRD----SVMAVKELGEIIMVVEMSHPGALE-FI 117 (208)
T ss_dssp CCEEEEEEEE----CSCHHHHHHHHHHHHHTTCSEEEEES----TTCHH----HHHHHHTTSEEEEECCCCSGGGGT-TT
T ss_pred CCEEEEEeee----CchHHHHHHHHHHHHhcCCCEEEEec----cCCHH----HHHHHHHhCCcEEEEecCCcchhh-HH
Confidence 5666777665 3 33334444333332 34433321 12222 36666676 998888753222211 1
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCC-eEccccccc--cCCCCcccccc
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL-KAKPKFAVM--FNKSDIPSDRD 164 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf-~v~pE~g~k--~~~~dl~ag~~ 164 (201)
.+.++..+..+.+.||+.+-++..+ + ++.+.+++.....+ .|.|-++.+ ....-+++|++
T Consensus 118 ~~~v~~~~~~a~~~G~~G~~~~~~~---~--~~i~~lr~~~~~~~~iv~gGI~~~g~~~~~~~~aGad 180 (208)
T 2czd_A 118 NPLTDRFIEVANEIEPFGVIAPGTR---P--ERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAGAD 180 (208)
T ss_dssp GGGHHHHHHHHHHHCCSEEECCCSS---T--HHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHhCCcEEEECCCC---h--HHHHHHHHhCCCCeEEEECCCCCCCCCHHHHHHcCCC
Confidence 2389999999999999999888653 2 23345565554444 345533333 12234555665
No 149
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=75.08 E-value=4.2 Score=35.29 Aligned_cols=97 Identities=10% Similarity=0.024 Sum_probs=68.7
Q ss_pred hHHHHHHHhhcccccEEEeeCccccccCh-----------hHHHHHHHHHHhCCceec------CccHHHHHHHhCCchH
Q 028948 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVS------TGDWAEHLIRNGPSAF 103 (201)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs~l~p~-----------~~L~eKI~l~~~~gV~v~------~GtlfE~al~qg~~~~ 103 (201)
..++..++. =+|.+-+-..+|-.+.+ +.+++-|+.++++|+.|. .|--++- ...++.+
T Consensus 85 ~~i~~a~~~---g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~--~~~~~~~ 159 (307)
T 1ydo_A 85 RGLENALEG---GINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEK--DVPIEQV 159 (307)
T ss_dssp HHHHHHHHH---TCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB--CCCHHHH
T ss_pred HhHHHHHhC---CcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCC--CCCHHHH
Confidence 345555554 36777766666544211 346888999999999884 2322221 2234567
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHC
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~ 142 (201)
.++++.+.++|.+.|=|.|-.--+.+++-.++|+.+++.
T Consensus 160 ~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~ 198 (307)
T 1ydo_A 160 IRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLAR 198 (307)
T ss_dssp HHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHh
Confidence 777888899999999999988888999989999999886
No 150
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=75.06 E-value=3.6 Score=35.26 Aligned_cols=119 Identities=13% Similarity=0.059 Sum_probs=70.8
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhC-CceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~-gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEI 120 (201)
.+......+| .+.++= .++ +.+.+.+++.++-.++. +.++--+-+....+ .+..++++++.+.+.|.+.|.+
T Consensus 30 ~la~av~~aG-glG~i~--~~~--~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~--~~~~~~~~~~~~~~~g~d~V~~ 102 (328)
T 2gjl_A 30 EMAAAVANAG-GLATLS--ALT--QPSPEALAAEIARCRELTDRPFGVNLTLLPTQ--KPVPYAEYRAAIIEAGIRVVET 102 (328)
T ss_dssp HHHHHHHHTT-SBCEEE--TTT--SSSHHHHHHHHHHHHHHCSSCCEEEEEECCCS--SCCCHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHCC-CeEEeC--CCC--CCCHHHHHHHHHHHHHhcCCCeEEEEeccccc--cCccHHHHHHHHHhcCCCEEEE
Confidence 4555555666 566662 222 33356677777777653 21111111110000 1236899999999999999999
Q ss_pred cCCcccCChhHHHHHHHHHHHCCCeEcccccc-ccCCCCcccccccccccEEEecccCcC
Q 028948 121 NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV-MFNKSDIPSDRDRAFGAYVARAPRSTD 179 (201)
Q Consensus 121 SdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~-k~~~~dl~ag~~~a~g~~Vi~E~Res~ 179 (201)
+-|. | .++++.+++.|.++.+.+.- +......++|+| +|++++++.|
T Consensus 103 ~~g~---p----~~~~~~l~~~gi~vi~~v~t~~~a~~~~~~GaD-----~i~v~g~~~G 150 (328)
T 2gjl_A 103 AGND---P----GEHIAEFRRHGVKVIHKCTAVRHALKAERLGVD-----AVSIDGFECA 150 (328)
T ss_dssp EESC---C----HHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCS-----EEEEECTTCS
T ss_pred cCCC---c----HHHHHHHHHcCCCEEeeCCCHHHHHHHHHcCCC-----EEEEECCCCC
Confidence 8663 4 36778888889988754321 111123456777 9999888764
No 151
>1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A*
Probab=74.86 E-value=3.9 Score=38.38 Aligned_cols=48 Identities=19% Similarity=0.200 Sum_probs=36.6
Q ss_pred HHHHHHHHHHcCCCEEEecC---------------Ccc---------cCC---------hhHHHHHHHHHHHCCCeEccc
Q 028948 103 FKEYVEDCKQVGFDTIELNV---------------GSL---------EIP---------EETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISd---------------Gti---------~i~---------~~~r~~lI~~~~~~Gf~v~pE 149 (201)
+.+-|+++|+|||++|+++- |.- ... .++..++|+.++++|++|.-.
T Consensus 122 ~~~~l~~l~~lG~~~v~l~Pi~~~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD 201 (637)
T 1gjw_A 122 MMLLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILD 201 (637)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCeecccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEE
Confidence 45668899999999999972 221 111 489999999999999999554
Q ss_pred c
Q 028948 150 F 150 (201)
Q Consensus 150 ~ 150 (201)
+
T Consensus 202 ~ 202 (637)
T 1gjw_A 202 F 202 (637)
T ss_dssp E
T ss_pred E
Confidence 4
No 152
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=74.79 E-value=9.6 Score=30.68 Aligned_cols=94 Identities=6% Similarity=-0.019 Sum_probs=58.4
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhC--CceecCc-cHHHHHHHhCCchHHHHHHHHHHcCC
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGF 115 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~--gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~lGF 115 (201)
.+....++++..+.++|++|+|+=-..-...+.++ ..+++ +.++..- -+. + .-..|.+.+.+.|.
T Consensus 17 ~~~~~~~~~~~~~~~vd~ie~g~~~~~~~G~~~i~----~lr~~~~~~~i~ld~~l~------d--~p~~~~~~~~~aGa 84 (218)
T 3jr2_A 17 NLTDAVAVASNVASYVDVIEVGTILAFAEGMKAVS----TLRHNHPNHILVCDMKTT------D--GGAILSRMAFEAGA 84 (218)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHTTHHHH----HHHHHCTTSEEEEEEEEC------S--CHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHhcCCceEEEeCcHHHHhcCHHHHH----HHHHhCCCCcEEEEEeec------c--cHHHHHHHHHhcCC
Confidence 56677788887888999999995221112223333 33333 4444321 121 1 12347788899999
Q ss_pred CEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 116 DTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 116 d~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
|.|=+-+-.. .+...++++.+++.|.++.
T Consensus 85 d~i~vh~~~~---~~~~~~~~~~~~~~g~~~~ 113 (218)
T 3jr2_A 85 DWITVSAAAH---IATIAACKKVADELNGEIQ 113 (218)
T ss_dssp SEEEEETTSC---HHHHHHHHHHHHHHTCEEE
T ss_pred CEEEEecCCC---HHHHHHHHHHHHHhCCccc
Confidence 9998876542 3445688888888888764
No 153
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=74.64 E-value=3.6 Score=39.02 Aligned_cols=50 Identities=10% Similarity=0.069 Sum_probs=36.7
Q ss_pred HHHHH--HHHHcCCCEEEecCCcc-------------------------cC-----ChhHHHHHHHHHHHCCCeEccccc
Q 028948 104 KEYVE--DCKQVGFDTIELNVGSL-------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 104 ~eyl~--~~k~lGFd~IEISdGti-------------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
.+-|+ ++++|||++|+|+-=+- .+ +.++..+||+.++++|++|.-.+=
T Consensus 58 ~~kLd~~yLk~LGvt~IwL~Pi~~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V 137 (686)
T 1d3c_A 58 INKINDGYLTGMGVTAIWISQPVENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDFA 137 (686)
T ss_dssp HHHHHTTTTGGGTCCEEEECCCEEECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhcCHHHHHhcCCCEEEeCCcccCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 34467 77999999999984211 11 368999999999999999955443
Q ss_pred cc
Q 028948 152 VM 153 (201)
Q Consensus 152 ~k 153 (201)
..
T Consensus 138 ~N 139 (686)
T 1d3c_A 138 PN 139 (686)
T ss_dssp TT
T ss_pred cC
Confidence 33
No 154
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=74.47 E-value=2 Score=36.81 Aligned_cols=72 Identities=14% Similarity=0.230 Sum_probs=52.7
Q ss_pred hHHHH-HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccccccc-CCCCcccccccccccEEEecccCcC
Q 028948 102 AFKEY-VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMF-NKSDIPSDRDRAFGAYVARAPRSTD 179 (201)
Q Consensus 102 ~~~ey-l~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~-~~~dl~ag~~~a~g~~Vi~E~Res~ 179 (201)
-+++| +++++..|-|.|=+-+. .++.++..++++.+++.|+.+..|+.-.. ...-+++|++ +|.+.+|.-.
T Consensus 122 iid~~qv~~A~~~GAD~VlLi~a--~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad-----~IGv~~r~l~ 194 (272)
T 3qja_A 122 VVQPYQIHEARAHGADMLLLIVA--ALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAK-----VIGVNARDLM 194 (272)
T ss_dssp CCSHHHHHHHHHTTCSEEEEEGG--GSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS-----EEEEESBCTT
T ss_pred ccCHHHHHHHHHcCCCEEEEecc--cCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCC-----EEEECCCccc
Confidence 57788 99999999999988544 45677888999999999999877663211 1122345666 9999888644
Q ss_pred e
Q 028948 180 K 180 (201)
Q Consensus 180 ~ 180 (201)
+
T Consensus 195 ~ 195 (272)
T 3qja_A 195 T 195 (272)
T ss_dssp T
T ss_pred c
Confidence 3
No 155
>2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus}
Probab=73.96 E-value=4 Score=40.55 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=35.8
Q ss_pred HHHHHHHHcCCCEEEecC----Cc------------------------ccCC------hhHHHHHHHHHHHCCCeEcccc
Q 028948 105 EYVEDCKQVGFDTIELNV----GS------------------------LEIP------EETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISd----Gt------------------------i~i~------~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+-|+++|+|||++||++= .+ ..++ .++..++|+.++++|++|+-.+
T Consensus 473 ~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~VILDv 552 (921)
T 2wan_A 473 TGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDV 552 (921)
T ss_dssp CHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCCCCCccHHHHHHHHHHHHHcCCEEEEEE
Confidence 347888999999999872 11 1222 4899999999999999995544
Q ss_pred cc
Q 028948 151 AV 152 (201)
Q Consensus 151 g~ 152 (201)
=.
T Consensus 553 V~ 554 (921)
T 2wan_A 553 VY 554 (921)
T ss_dssp CT
T ss_pred cc
Confidence 33
No 156
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=73.90 E-value=4 Score=38.08 Aligned_cols=48 Identities=19% Similarity=0.249 Sum_probs=35.7
Q ss_pred HHHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 106 YVEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 106 yl~~~k~lGFd~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
=|+++++|||++|++|- |.-. + +.++..++|+.++++|++|.-.+=..
T Consensus 45 ~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 111 (589)
T 3aj7_A 45 KLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVIN 111 (589)
T ss_dssp THHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 36788999999999952 3221 1 36889999999999999996544433
No 157
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=73.81 E-value=3.9 Score=38.71 Aligned_cols=128 Identities=9% Similarity=0.054 Sum_probs=83.5
Q ss_pred hcccccEEEeeCccccccChhHHHHHHHHHHhCCcee--cCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC
Q 028948 50 MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYV--STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI 127 (201)
Q Consensus 50 ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v--~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i 127 (201)
...=+|.+-+-..++-+ +.+++-|+.++++|..+ +... |......++.+-+..+.+.++|.+.|=|-|-.--+
T Consensus 127 ~~aGvd~vrIf~s~sd~---~ni~~~i~~ak~~G~~v~~~i~~--~~~~~~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~ 201 (539)
T 1rqb_A 127 AENGMDVFRVFDAMNDP---RNMAHAMAAVKKAGKHAQGTICY--TISPVHTVEGYVKLAGQLLDMGADSIALKDMAALL 201 (539)
T ss_dssp HHTTCCEEEECCTTCCT---HHHHHHHHHHHHTTCEEEEEEEC--CCSTTCCHHHHHHHHHHHHHTTCSEEEEEETTCCC
T ss_pred HhCCCCEEEEEEehhHH---HHHHHHHHHHHHCCCeEEEEEEe--eeCCCCCHHHHHHHHHHHHHcCCCEEEeCCCCCCc
Confidence 33458888887766655 55999999999999976 2210 00112244466677777888999999999988888
Q ss_pred ChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEecccCcCeeccccCCcee
Q 028948 128 PEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIE 190 (201)
Q Consensus 128 ~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~~~~ 190 (201)
.+.+-.++|+.++++ +.....+++...+ ..+++|++ .|- +-=+|.=.-+.||.+|
T Consensus 202 ~P~~v~~lv~~l~~~-~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~-----~VD--~ti~g~GertGN~~lE 266 (539)
T 1rqb_A 202 KPQPAYDIIKAIKDT-YGQKTQINLHCHSTTGVTEVSLMKAIEAGVD-----VVD--TAISSMSLGPGHNPTE 266 (539)
T ss_dssp CHHHHHHHHHHHHHH-HCTTCCEEEEEBCTTSCHHHHHHHHHHTTCS-----EEE--EBCGGGCSTTSBCBHH
T ss_pred CHHHHHHHHHHHHHh-cCCCceEEEEeCCCCChHHHHHHHHHHhCCC-----EEE--EeccccCCCccChhHH
Confidence 888888999999876 2101223333221 34778888 443 3333444447888776
No 158
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=73.67 E-value=11 Score=31.95 Aligned_cols=111 Identities=7% Similarity=0.036 Sum_probs=67.7
Q ss_pred CCceeEecCCCCCC-cchhHHHHHHHhhc-ccccEEEeeCccccccChhHHH-HHHHHHHhC-Ccee--cCc---cHHHH
Q 028948 24 FGVTEMRSPHYTLS-SSHNVLEDIFESMG-QFVDGLKFSGGSHSLMPKPFIE-EVVKRAHQH-DVYV--STG---DWAEH 94 (201)
Q Consensus 24 ~GlTmV~DkG~s~~-~g~~~l~DlLe~ag-~yID~lKfg~GTs~l~p~~~L~-eKI~l~~~~-gV~v--~~G---tlfE~ 94 (201)
+|.-+++-+|++.. .-....-+++.+.| +.|=.+.=|+-|..=|+.+.+. .-+..+++. +++| ++. |.-+
T Consensus 129 ~~kPV~lk~G~~~t~~e~~~Av~~i~~~Gn~~i~L~~RG~~~~~~y~~~~v~L~ai~~lk~~~~~pVi~d~sH~~g~~~- 207 (262)
T 1zco_A 129 VENPVLLKRGMGNTIQELLYSAEYIMAQGNENVILCERGIRTFETATRFTLDISAVPVVKELSHLPIIVDPSHPAGRRS- 207 (262)
T ss_dssp SSSCEEEECCTTCCHHHHHHHHHHHHTTTCCCEEEEECCBCCSCCSSSSBCCTTHHHHHHHHBSSCEEECSSTTTCSGG-
T ss_pred cCCcEEEecCCCCCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCcChhhcCHHHHHHHHhhhCCCEEEEcCCCCCccc-
Confidence 57788999997421 01112223334445 4666666554444455666555 455555554 7765 331 2111
Q ss_pred HHHhCCchHHHHHHHHHHcCCC--EEE--------ecCCcccCChhHHHHHHHHHHHC
Q 028948 95 LIRNGPSAFKEYVEDCKQVGFD--TIE--------LNVGSLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 95 al~qg~~~~~eyl~~~k~lGFd--~IE--------ISdGti~i~~~~r~~lI~~~~~~ 142 (201)
-+..-...+..+|.+ .|| +|||..+|++++..++++.+++.
T Consensus 208 -------~v~~~~~aAva~Ga~Gl~iE~H~~~d~al~D~~~sl~p~~~~~l~~~i~~~ 258 (262)
T 1zco_A 208 -------LVIPLAKAAYAIGADGIMVEVHPEPEKALSDSQQQLTFDDFLQLLKELEAL 258 (262)
T ss_dssp -------GHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCTTTCBCHHHHHHHHHHHHHT
T ss_pred -------hHHHHHHHHHHcCCCEEEEEecCCccccCChhhcCCCHHHHHHHHHHHHHH
Confidence 122233346789999 999 56999999999999999988753
No 159
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=73.65 E-value=5.1 Score=37.68 Aligned_cols=50 Identities=12% Similarity=0.200 Sum_probs=36.3
Q ss_pred HHHHHHHHHHcCCCEEEecCCcc----------------c---------C-----ChhHHHHHHHHHHHCCCeEcccccc
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSL----------------E---------I-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti----------------~---------i-----~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
+.+-|+++++|||++|.++==+- + + +.++..++|+.++++|++|.-.+=.
T Consensus 152 i~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 231 (599)
T 3bc9_A 152 LAERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDAVL 231 (599)
T ss_dssp HHHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 33446788999999999982111 0 2 3588999999999999999554433
No 160
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=73.62 E-value=4.8 Score=33.61 Aligned_cols=50 Identities=16% Similarity=0.115 Sum_probs=36.1
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc------------c--------cCC-----hhHHHHHHHHHHHCCCeEcccc
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGS------------L--------EIP-----EETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGt------------i--------~i~-----~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
..+++.++.+|++||++|-+.--. + .+. .+...++|+.|+++|++|..++
T Consensus 36 ~~~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 36 ADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp HHHHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 478889999999999999884211 0 111 3444689999999999997765
No 161
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=73.52 E-value=4.3 Score=37.36 Aligned_cols=47 Identities=21% Similarity=0.200 Sum_probs=35.0
Q ss_pred HHHHHHcCCCEEEecC---------Cccc-----C-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 107 VEDCKQVGFDTIELNV---------GSLE-----I-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 107 l~~~k~lGFd~IEISd---------Gti~-----i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
|+++++|||++|.+|- |.-. + +.++..++|+.++++|++|.-.+=..
T Consensus 37 ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~V~N 102 (558)
T 1uok_A 37 LDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDLVVN 102 (558)
T ss_dssp HHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5678999999999962 2211 2 35789999999999999996554433
No 162
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A
Probab=73.33 E-value=1.2 Score=37.14 Aligned_cols=102 Identities=11% Similarity=0.060 Sum_probs=66.7
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCcc-HHHHHHHhCCchHH
Q 028948 26 VTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFK 104 (201)
Q Consensus 26 lTmV~DkG~s~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~Gt-lfE~al~qg~~~~~ 104 (201)
+=+=+|+. .+....++++..++|+|++|++..-..-+..+ -|+..+++|..+..-- +. -.|+...
T Consensus 17 ~ilalD~~-----~l~~~~~~~~~~~~~v~~~Kv~~d~~~~~G~~----~v~~lr~~~~~v~lD~kl~-----Dip~t~~ 82 (245)
T 1eix_A 17 VVVALDYH-----NRDDALAFVDKIDPRDCRLKVGKEMFTLFGPQ----FVRELQQRGFDIFLDLKFH-----DIPNTAA 82 (245)
T ss_dssp EEEEECCS-----SHHHHHHHHTTSCTTTCEEEEEHHHHHHHHHH----HHHHHHHTTCCEEEEEEEC-----SCHHHHH
T ss_pred eEEEECCC-----CHHHHHHHHHHhCccCcEEEEcHHHHHHhCHH----HHHHHHHCCCcEEEEeecc-----ccHHHHH
Confidence 33445653 56678888999999999999998664333333 3444566654444321 21 1234566
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCC
Q 028948 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf 144 (201)
.|++.+.++|.|.|-|.-- ...+...++++.+++.|.
T Consensus 83 ~~i~~~~~~Gad~vTvH~~---~g~~~l~~~~~~~~~~G~ 119 (245)
T 1eix_A 83 HAVAAAADLGVWMVNVHAS---GGARMMTAAREALVPFGK 119 (245)
T ss_dssp HHHHHHHHHTCSEEEEBGG---GCHHHHHHHHHTTGGGGG
T ss_pred HHHHHHHhCCCCEEEEecc---CCHHHHHHHHHHHHHcCC
Confidence 7888999999999999853 234445688888887765
No 163
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila}
Probab=73.31 E-value=4.3 Score=32.60 Aligned_cols=51 Identities=10% Similarity=0.104 Sum_probs=36.2
Q ss_pred CchHHHHHHHHHHcCCCEEEec---CCcc--------------------------------cCChhHHHHHHHHHHHCCC
Q 028948 100 PSAFKEYVEDCKQVGFDTIELN---VGSL--------------------------------EIPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEIS---dGti--------------------------------~i~~~~r~~lI~~~~~~Gf 144 (201)
+..+++.|+.++++||++|-+= +|.. +-..+...++++.++++|+
T Consensus 36 ~~~~~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi 115 (387)
T 4awe_A 36 QPDIEKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGI 115 (387)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCC
Confidence 3478999999999999999981 1100 0112334578999999999
Q ss_pred eEcccc
Q 028948 145 KAKPKF 150 (201)
Q Consensus 145 ~v~pE~ 150 (201)
+|..++
T Consensus 116 ~v~~~~ 121 (387)
T 4awe_A 116 KLIVAL 121 (387)
T ss_dssp EEEEEC
T ss_pred EEEEee
Confidence 997665
No 164
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=73.28 E-value=3.4 Score=32.93 Aligned_cols=65 Identities=20% Similarity=0.202 Sum_probs=53.1
Q ss_pred HHHHHhCCc-eecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 76 VKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 76 I~l~~~~gV-~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
-++++++|| .+.- |-..++|+.+- .. .+.++||+++=++|.+-+.+++.....++.+++.|-++.
T Consensus 117 ~~~L~~~gi~~lvv~G~~t~~CV~~T--a~-----da~~~G~~v~v~~Da~~~~~~~~~~~al~~m~~~G~~i~ 183 (186)
T 3gbc_A 117 LNWLRQRGVDEVDVVGIATDHCVRQT--AE-----DAVRNGLATRVLVDLTAGVSADTTVAALEEMRTASVELV 183 (186)
T ss_dssp HHHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHhcCCCEEEEEEecccHHHHHH--HH-----HHHHCCCeEEEEhhhcCCCCHHHHHHHHHHHHHcCCEEe
Confidence 345677899 4444 77888888885 33 356799999999999999999999999999999998764
No 165
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=73.26 E-value=4.2 Score=36.52 Aligned_cols=47 Identities=17% Similarity=0.160 Sum_probs=35.2
Q ss_pred HHHHH--------HHcCCCEEEecCCc--------c-----cC-----ChhHHHHHHHHHHHCCCeEcccccc
Q 028948 106 YVEDC--------KQVGFDTIELNVGS--------L-----EI-----PEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 106 yl~~~--------k~lGFd~IEISdGt--------i-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
=|+++ ++|||++|.++-=+ - .+ +.++..++|+.++++|++|.-.+=.
T Consensus 32 ~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 32 KLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp THHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred hhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 36788 99999999997321 1 11 3689999999999999999554433
No 166
>3g3d_A UMP synthase, uridine 5'-monophosphate synthase; C-terminal domain, orotidine 5'-monophosphate decarboxylase, human, 5-fluoro-6-azido-UMP; HET: 5FU; 1.70A {Homo sapiens} PDB: 3bvj_A* 3mw7_A* 4hib_A* 4hkp_A* 2p1f_A 2eaw_A 3bgg_A* 3bgj_A*
Probab=73.11 E-value=5.4 Score=35.34 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=40.3
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceec
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS 87 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~ 87 (201)
......++++..++|++++|.|+--..-+..+.+++..++++.+|..++
T Consensus 94 ~~~~al~l~~~l~~~v~~vKvG~~l~~~~G~~~v~~L~~~a~~~g~~If 142 (312)
T 3g3d_A 94 LARELLQLADALGPSICMLKTHVDILNDFTLDVMKELITLAKCHEFLIF 142 (312)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCTTCCHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCCceEEEEcHHHHHHhCHHHHHHHHHHHhhCCCEEE
Confidence 6778899999999999999999777666777788888888777776554
No 167
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=73.10 E-value=4.2 Score=38.16 Aligned_cols=44 Identities=16% Similarity=0.049 Sum_probs=33.9
Q ss_pred HHHHHH-cCCCEEEecCCccc-------------C-----ChhHHHHHHHHHHHCC--C--eEcccc
Q 028948 107 VEDCKQ-VGFDTIELNVGSLE-------------I-----PEETLLRYVRLVKSAG--L--KAKPKF 150 (201)
Q Consensus 107 l~~~k~-lGFd~IEISdGti~-------------i-----~~~~r~~lI~~~~~~G--f--~v~pE~ 150 (201)
|+++|+ |||++||++-=+-. + +.++..++|+.++++| + +|+-.+
T Consensus 197 LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~G~~I~~~VIlD~ 263 (637)
T 1ji1_A 197 LGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHSTANGPKGYLILDG 263 (637)
T ss_dssp HHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCSSSSSCCEEEEEE
T ss_pred HHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhCCCCccceEEEEE
Confidence 578899 99999999742211 1 3689999999999999 9 985443
No 168
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=72.96 E-value=4.9 Score=33.43 Aligned_cols=17 Identities=18% Similarity=0.255 Sum_probs=11.1
Q ss_pred hHHHHHHHHHHcCCCEE
Q 028948 102 AFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~I 118 (201)
.+++.+++|++.|+-+|
T Consensus 66 ~ld~~v~~a~~~Gi~Vi 82 (302)
T 1bqc_A 66 DVANVISLCKQNRLICM 82 (302)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
Confidence 56666666776666554
No 169
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=72.95 E-value=39 Score=29.24 Aligned_cols=80 Identities=8% Similarity=0.119 Sum_probs=53.8
Q ss_pred cChhHHHHHHHHHHhCCceecC---c-cHHHH----HHHhCC----------------chHHHHHHHHHHcCCCEEEecC
Q 028948 67 MPKPFIEEVVKRAHQHDVYVST---G-DWAEH----LIRNGP----------------SAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV~v~~---G-tlfE~----al~qg~----------------~~~~eyl~~~k~lGFd~IEISd 122 (201)
.+.+.+++.+++++++|.++.. . .+.+. +..+|. ..+++.++.+++.|... -+.
T Consensus 166 ~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~~-~i~- 243 (448)
T 3hm7_A 166 SHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLTCCPI-HIC- 243 (448)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCE-EEC-
T ss_pred CCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHhCCCE-EEE-
Confidence 3677899999999999997765 2 23321 111111 14667788888888763 332
Q ss_pred CcccCChhHHHHHHHHHHHCCCeEccccc
Q 028948 123 GSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
-++..+-.++|+++++.|+.|..|.-
T Consensus 244 ---H~s~~~~~~~i~~ak~~G~~v~~e~~ 269 (448)
T 3hm7_A 244 ---HVSSRKVLKRIKQAKGEGVNVSVETC 269 (448)
T ss_dssp ---CCCCHHHHHHHHHHHHTTCCEEEEEC
T ss_pred ---eCCCHHHHHHHHHHHhcCCCEEEEec
Confidence 33456777999999999998866553
No 170
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=72.90 E-value=1.7 Score=38.12 Aligned_cols=70 Identities=17% Similarity=0.385 Sum_probs=43.1
Q ss_pred HHHHHHHHHHhC-----CceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHHHHHHH
Q 028948 71 FIEEVVKRAHQH-----DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRYVRLVK 140 (201)
Q Consensus 71 ~L~eKI~l~~~~-----gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~-----i~~~~r~~lI~~~~ 140 (201)
.+.|.|+-.++. +|++++..|.+--+. .+...++.+.+.+.|+|+|+||+|... .++.-..+++++++
T Consensus 196 ~~~eiv~avr~~v~~pv~vRls~~~~~~~g~~--~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik 273 (340)
T 3gr7_A 196 FLGEVIDAVREVWDGPLFVRISASDYHPDGLT--AKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIR 273 (340)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEESCCCSTTSCC--GGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCceEEEeccccccCCCCC--HHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHH
Confidence 456666666553 456777655432111 235667888888999999999988642 12333456666666
Q ss_pred HC
Q 028948 141 SA 142 (201)
Q Consensus 141 ~~ 142 (201)
+.
T Consensus 274 ~~ 275 (340)
T 3gr7_A 274 RE 275 (340)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 171
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=72.75 E-value=2.1 Score=33.62 Aligned_cols=105 Identities=11% Similarity=0.177 Sum_probs=52.0
Q ss_pred CCCCCcchhHHHHHHHhhcccccEEEeeCcccccc--ChhHHHHHHHHHHhCC-ceecCccH----HHHHHHhCCchHHH
Q 028948 33 HYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLM--PKPFIEEVVKRAHQHD-VYVSTGDW----AEHLIRNGPSAFKE 105 (201)
Q Consensus 33 G~s~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~--p~~~L~eKI~l~~~~g-V~v~~Gtl----fE~al~qg~~~~~e 105 (201)
|=+++ -+..+.++++.+-+. .+++.+-|.... ..+.+++..+. .+ |.++.-++ .+..-..+.+++-+
T Consensus 78 GEP~l-~~~~l~~l~~~~~~~--~~~i~i~Tng~~~~~~~~~~~l~~~---~~~v~isld~~~~~~~~~~~~~~~~~~~~ 151 (245)
T 3c8f_A 78 GEAIL-QAEFVRDWFRACKKE--GIHTCLDTNGFVRRYDPVIDELLEV---TDLVMLDLKQMNDEIHQNLVGVSNHRTLE 151 (245)
T ss_dssp SCGGG-GHHHHHHHHHHHHTT--TCCEEEEECCCCCCCCHHHHHHHHT---CSEEEEECCCSSHHHHHHHHSSCSHHHHH
T ss_pred CCcCC-CHHHHHHHHHHHHHc--CCcEEEEeCCCcCcCHHHHHHHHHh---CCEEEEeCCCCCHHHhhhccCCCHHHHHH
Confidence 55444 455567777776654 235555554333 33445443332 22 44444222 22221112234555
Q ss_pred HHHHHHHcCCCEEEecCCcc-c--CChhHHHHHHHHHHHCCC
Q 028948 106 YVEDCKQVGFDTIELNVGSL-E--IPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti-~--i~~~~r~~lI~~~~~~Gf 144 (201)
-++.+++.|+. +.++--.+ . -+.++..++++.+++.|.
T Consensus 152 ~i~~l~~~g~~-v~i~~~~~~g~~~~~~~~~~~~~~~~~~~~ 192 (245)
T 3c8f_A 152 FAKYLANKNVK-VWIRYVVVPGWSDDDDSAHRLGEFTRDMGN 192 (245)
T ss_dssp HHHHHHHHTCC-EEEEEEECTTTTCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHhcCCE-EEEEEeecCCCCCCHHHHHHHHHHHHhcCC
Confidence 66677777875 23321111 1 123677788888888774
No 172
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=72.74 E-value=17 Score=32.41 Aligned_cols=44 Identities=14% Similarity=0.285 Sum_probs=32.7
Q ss_pred chhHHHHHHHhhcc--cccEEEeeCccccccChhHHHHHHHHHHhC
Q 028948 39 SHNVLEDIFESMGQ--FVDGLKFSGGSHSLMPKPFIEEVVKRAHQH 82 (201)
Q Consensus 39 g~~~l~DlLe~ag~--yID~lKfg~GTs~l~p~~~L~eKI~l~~~~ 82 (201)
....+..+++.+.+ -+.-+-|.+|--.+.+.+.|.+.++.+++.
T Consensus 146 s~eei~~~i~~i~~~~gi~~V~ltGGEPll~~d~~L~~il~~l~~~ 191 (416)
T 2a5h_A 146 PMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREI 191 (416)
T ss_dssp CHHHHHHHHHHHHTCTTCCEEEEEESCTTSSCHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHhcCCCcEEEEECCCCCCCCHHHHHHHHHHHHhc
Confidence 45566666665544 366788888988888877788888888886
No 173
>3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A
Probab=72.65 E-value=4.7 Score=39.26 Aligned_cols=49 Identities=18% Similarity=0.226 Sum_probs=36.6
Q ss_pred HHHHHHHcCCCEEEec-----C-----Ccc-----cC-----ChhHHHHHHHHHHHCCCeEcccccccc
Q 028948 106 YVEDCKQVGFDTIELN-----V-----GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVMF 154 (201)
Q Consensus 106 yl~~~k~lGFd~IEIS-----d-----Gti-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~ 154 (201)
-++++++|||++|+++ . |.- .+ +.++..++|+.++++|++|.-.+=...
T Consensus 207 ~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH 275 (755)
T 3aml_A 207 VLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSH 275 (755)
T ss_dssp THHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred HHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCCCCCCHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 4778899999999997 1 111 11 368999999999999999965544433
No 174
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3
Probab=72.58 E-value=6.2 Score=34.18 Aligned_cols=58 Identities=19% Similarity=0.218 Sum_probs=41.0
Q ss_pred HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc--------CCh---hHHHHHHHHHHHCCCeEcccc
Q 028948 92 AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE--------IPE---ETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 92 fE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~--------i~~---~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+|..+. ++...++.++.++++||++|-|.-+.-. +.+ +...++|+.++++|++|...+
T Consensus 53 ~e~~W~-~~~~~~~di~~i~~~G~n~vRipv~w~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~ 121 (380)
T 1edg_A 53 YETSWS-GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVILNT 121 (380)
T ss_dssp HHHHTT-CSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTTEECHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred ccCcCC-CCcccHHHHHHHHHcCCCEEEecccHHhhcCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeC
Confidence 465543 3345688999999999999999754321 222 344678999999999996543
No 175
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=72.56 E-value=5.5 Score=36.61 Aligned_cols=49 Identities=16% Similarity=0.197 Sum_probs=35.9
Q ss_pred HHHHHHHHcCCCEEEecC---------Ccc-----cC-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 105 EYVEDCKQVGFDTIELNV---------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISd---------Gti-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
+=|+++++|||++|.++- |.- .+ +.++..++|+.++++|++|.-.+=..
T Consensus 35 ~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 102 (555)
T 2ze0_A 35 EKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDLVIN 102 (555)
T ss_dssp HTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEecc
Confidence 346788999999999853 211 11 36889999999999999996544333
No 176
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=72.56 E-value=4.3 Score=38.34 Aligned_cols=48 Identities=19% Similarity=0.341 Sum_probs=36.1
Q ss_pred HHHHHHHHHHcCCCEEEecC-----------Ccc-----cC-----ChhHHHHHHHHHHHCCCeEcccc
Q 028948 103 FKEYVEDCKQVGFDTIELNV-----------GSL-----EI-----PEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISd-----------Gti-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+.+-++++++|||++|.++- |.- .+ +.++..++|+.++++|++|.-.+
T Consensus 115 i~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~ 183 (628)
T 1g5a_A 115 LKDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (628)
T ss_dssp HHTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 44557888999999999862 221 12 25899999999999999995443
No 177
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=72.38 E-value=4.4 Score=38.40 Aligned_cols=51 Identities=10% Similarity=0.053 Sum_probs=37.2
Q ss_pred HHHHHH--HHHHcCCCEEEecCCcc--------------------------cC-----ChhHHHHHHHHHHHCCCeEccc
Q 028948 103 FKEYVE--DCKQVGFDTIELNVGSL--------------------------EI-----PEETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 103 ~~eyl~--~~k~lGFd~IEISdGti--------------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE 149 (201)
+.+-|+ ++++|||++|.||-=+- .+ +.++..+||+.++++|++|.-.
T Consensus 57 i~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD 136 (683)
T 3bmv_A 57 IINKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIID 136 (683)
T ss_dssp HHHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 334477 78999999999984211 11 2688999999999999999554
Q ss_pred cccc
Q 028948 150 FAVM 153 (201)
Q Consensus 150 ~g~k 153 (201)
+=..
T Consensus 137 ~V~N 140 (683)
T 3bmv_A 137 FAPN 140 (683)
T ss_dssp ECTT
T ss_pred Eccc
Confidence 4333
No 178
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=72.26 E-value=6.1 Score=37.99 Aligned_cols=50 Identities=22% Similarity=0.450 Sum_probs=40.9
Q ss_pred CchHHHHHHHHHHcCCCEEEe---------cCCcccCC-hhHHHHHHHHHHHCCCeEccc
Q 028948 100 PSAFKEYVEDCKQVGFDTIEL---------NVGSLEIP-EETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEI---------SdGti~i~-~~~r~~lI~~~~~~Gf~v~pE 149 (201)
++..++-++.+|++||++|++ ..|..+.+ ..+..++|+.|+++||.|.-.
T Consensus 31 ~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a~~~Gl~Vilr 90 (595)
T 4e8d_A 31 PEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLGLYAIVR 90 (595)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeccHHHcCCCCCeecccchhhHHHHHHHHHHcCCEEEEe
Confidence 557888999999999999988 56666665 346789999999999999654
No 179
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=71.73 E-value=4.4 Score=33.97 Aligned_cols=49 Identities=10% Similarity=0.164 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc--CC---------------hhHHHHHHHHHHHCCCeEcccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLE--IP---------------EETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~--i~---------------~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.+++-++.+|++||++|-+.-..-. -| .+...++|+.++++|++|..++
T Consensus 46 ~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l 111 (353)
T 2c0h_A 46 TFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTL 111 (353)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 6788999999999999998632210 01 1234689999999999998765
No 180
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=71.55 E-value=3.4 Score=35.94 Aligned_cols=45 Identities=20% Similarity=0.260 Sum_probs=35.9
Q ss_pred HHHHHHHHHcCCCEEEe------cCCcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 104 KEYVEDCKQVGFDTIEL------NVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEI------SdGti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
++.++.+|++|+++|-+ +.|..+ .+.-+++++++++.||+|...+
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~~g~~d--~~~~~~~~~~ak~~Gl~v~ld~ 80 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPSDGSYD--LDYNLELAKRVKAAGMSLYLDL 80 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCTTCTTC--HHHHHHHHHHHHHTTCEEEEEE
T ss_pred chHHHHHHHcCCCEEEEEEEECCCCCccC--HHHHHHHHHHHHHCCCEEEEEe
Confidence 45688899999999999 345333 5677789999999999997654
No 181
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=71.53 E-value=37 Score=27.05 Aligned_cols=81 Identities=17% Similarity=0.322 Sum_probs=49.6
Q ss_pred hhHHHHHHHHHHhCCcee---cC-ccHH-------HHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC--C-hhHHHH
Q 028948 69 KPFIEEVVKRAHQHDVYV---ST-GDWA-------EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI--P-EETLLR 134 (201)
Q Consensus 69 ~~~L~eKI~l~~~~gV~v---~~-Gtlf-------E~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i--~-~~~r~~ 134 (201)
.+.+++.-++++++|+.+ +. +.+. +....+.-+.+++.++.|++||.+.|=+..|...- + ++.+.+
T Consensus 46 ~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~ 125 (285)
T 1qtw_A 46 TQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLAR 125 (285)
T ss_dssp HHHHHHHHHHHHHTTCCGGGBCCBCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCCEEEECCCBCTTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCceeEEecCCcccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHH
Confidence 456888899999999984 33 2221 11111111268899999999999999887776532 2 333434
Q ss_pred HHHHHH-----HCCCeEccc
Q 028948 135 YVRLVK-----SAGLKAKPK 149 (201)
Q Consensus 135 lI~~~~-----~~Gf~v~pE 149 (201)
+++..+ +.|.++..|
T Consensus 126 ~~~~l~~l~a~~~gv~l~lE 145 (285)
T 1qtw_A 126 IAESINIALDKTQGVTAVIE 145 (285)
T ss_dssp HHHHHHHHHHHCSSCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEEe
Confidence 443332 356666444
No 182
>3gdm_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, K93R mutant, lyase, phosphoprotein; 1.60A {Saccharomyces cerevisiae} SCOP: c.1.2.3 PDB: 3gdl_A* 3gdk_A* 3gdt_A* 3gdr_A* 1dqw_A 1dqx_A*
Probab=71.53 E-value=5.7 Score=34.18 Aligned_cols=49 Identities=10% Similarity=0.060 Sum_probs=39.1
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChh-HHHHHHHHHHhCCceec
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKP-FIEEVVKRAHQHDVYVS 87 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~-~L~eKI~l~~~~gV~v~ 87 (201)
......++++..++||+++|.|+--..-+..+ .+++..++++++|..|+
T Consensus 40 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~~~~v~~L~~l~~~~g~~If 89 (267)
T 3gdm_A 40 TTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLF 89 (267)
T ss_dssp CHHHHHHHHHHHGGGCSEEEECGGGCSSCCTTTTHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCCcCcEEEECHHHHHhcCHHHHHHHHHHHHhhcCCeEE
Confidence 67788999999999999999998776666667 77777777766665554
No 183
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=71.49 E-value=17 Score=30.33 Aligned_cols=76 Identities=11% Similarity=0.094 Sum_probs=47.9
Q ss_pred HHHHhhccc-ccEEEeeCccccccC----hhHHHHHHHHHHhCCce---ecCc---c----HH---HHHHHhCCchHHHH
Q 028948 45 DIFESMGQF-VDGLKFSGGSHSLMP----KPFIEEVVKRAHQHDVY---VSTG---D----WA---EHLIRNGPSAFKEY 106 (201)
Q Consensus 45 DlLe~ag~y-ID~lKfg~GTs~l~p----~~~L~eKI~l~~~~gV~---v~~G---t----lf---E~al~qg~~~~~ey 106 (201)
+.|+.+.+. .|++=+.......++ ...+++.-+++.++|+. +... . +. +....+.-+.+++.
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~l~~~gL~~~~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~ 114 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENYAQDLENYTNLRHYLDSEGLENVKISTNVGATRTFDPSSNYPEQRQEALEYLKSR 114 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGHHHHHHHHHHHHHHHHHTTCTTCEEEEECCCCSSSCTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCcccccccchHHHHHHHHHHHHCCCCcceeEEEeccCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 555544443 778877755332333 14588888999999998 6632 1 11 11111111268999
Q ss_pred HHHHHHcCCCEEEec
Q 028948 107 VEDCKQVGFDTIELN 121 (201)
Q Consensus 107 l~~~k~lGFd~IEIS 121 (201)
++.|++||.+.| +.
T Consensus 115 i~~A~~lG~~~v-~~ 128 (335)
T 2qw5_A 115 VDITAALGGEIM-MG 128 (335)
T ss_dssp HHHHHHTTCSEE-EE
T ss_pred HHHHHHcCCCEE-ec
Confidence 999999999999 64
No 184
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics, uncharacterized protein, protein struct initiative, PSI-2; 2.20A {Bacillus subtilis subsp}
Probab=71.47 E-value=9.9 Score=32.43 Aligned_cols=50 Identities=10% Similarity=0.258 Sum_probs=34.0
Q ss_pred HHHHHHHhCCceecC--ccH---------HHHHHHhCC----chHHHHHHHHHHcCCCEEEecCCc
Q 028948 74 EVVKRAHQHDVYVST--GDW---------AEHLIRNGP----SAFKEYVEDCKQVGFDTIELNVGS 124 (201)
Q Consensus 74 eKI~l~~~~gV~v~~--Gtl---------fE~al~qg~----~~~~eyl~~~k~lGFd~IEISdGt 124 (201)
+.++.+|+.|++|.+ |+| |..++ .++ .-++.-++.+++.|||.|.|.=-.
T Consensus 57 ~~~~~~~~~~~kv~lsigg~~~~~~~~~~~~~~~-~~~~~r~~fi~si~~~~~~~gfDGiDiDwE~ 121 (319)
T 3cz8_A 57 AAIETTWQRRVTPLATITNLTSGGFSTEIVHQVL-NNPTARTNLVNNIYDLVSTRGYGGVTIDFEQ 121 (319)
T ss_dssp HHHHHHHHTTCEEEEEEECEETTEECHHHHHHHH-TCHHHHHHHHHHHHHHHHHHTCSEEEEECCS
T ss_pred HHHHHHHHCCCeEEEEEecCCCCCcCHHHHHHHH-cCHHHHHHHHHHHHHHHHHhCCCeEEEeccC
Confidence 456778999998775 543 22222 222 146777788999999999997544
No 185
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=71.30 E-value=8.6 Score=34.58 Aligned_cols=104 Identities=13% Similarity=0.225 Sum_probs=71.6
Q ss_pred chhHHHHHHHhhccccc---EEEeeCccccccChhHHHHHHHHHHhCCc-eecCc--cHHHHHHHh---C--CchHHHHH
Q 028948 39 SHNVLEDIFESMGQFVD---GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVSTG--DWAEHLIRN---G--PSAFKEYV 107 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID---~lKfg~GTs~l~p~~~L~eKI~l~~~~gV-~v~~G--tlfE~al~q---g--~~~~~eyl 107 (201)
.+..++++++.+-.+.+ ...+... .-|..+-.++++.++++|+ .++.| ++-+..+.. + .+.+.+-+
T Consensus 119 ~~~~l~~ll~~i~~~~~~~~~~eitie---~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai 195 (457)
T 1olt_A 119 NKAQISRLMKLLRENFQFNADAEISIE---VDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALL 195 (457)
T ss_dssp CHHHHHHHHHHHHHHSCEEEEEEEEEE---ECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEE---EccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHH
Confidence 56789999999888644 3455543 2444445789999999998 66667 554444432 1 12455667
Q ss_pred HHHHHcCCCE--EEecCCcccCChhHHHHHHHHHHHCCCe
Q 028948 108 EDCKQVGFDT--IELNVGSLEIPEETLLRYVRLVKSAGLK 145 (201)
Q Consensus 108 ~~~k~lGFd~--IEISdGti~i~~~~r~~lI~~~~~~Gf~ 145 (201)
+.+++.||+. +-+--|.-.-+.+++.+.++.+.+.+..
T Consensus 196 ~~~r~~G~~~v~~dlI~GlPget~e~~~~tl~~~~~l~~~ 235 (457)
T 1olt_A 196 NHAREIGFTSTNIDLIYGLPKQTPESFAFTLKRVAELNPD 235 (457)
T ss_dssp HHHHHTTCCSCEEEEEESCTTCCHHHHHHHHHHHHHHCCS
T ss_pred HHHHHcCCCcEEEEEEcCCCCCCHHHHHHHHHHHHhcCcC
Confidence 7888999973 4444565566788999999999998865
No 186
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=70.98 E-value=28 Score=28.98 Aligned_cols=104 Identities=12% Similarity=0.044 Sum_probs=63.6
Q ss_pred HHHHHHHhhccc-ccEEEeeCc-----c-ccccC----hhHHHHHHHHHHhCCceecC-c-cH-H--------HHHHHhC
Q 028948 42 VLEDIFESMGQF-VDGLKFSGG-----S-HSLMP----KPFIEEVVKRAHQHDVYVST-G-DW-A--------EHLIRNG 99 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~G-----T-s~l~p----~~~L~eKI~l~~~~gV~v~~-G-tl-f--------E~al~qg 99 (201)
.+++.|+.+.+. .|.+=+... . .-..| .+.+++.-++++++|+.+.. . .+ + |.. .
T Consensus 37 ~l~~~l~~aa~~G~~~VEl~~~~~~~~~~~~~~p~~~~~~~~~~l~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~-~-- 113 (305)
T 3obe_A 37 DMPNGLNRLAKAGYTDLEIFGYREDTGKFGDYNPKNTTFIASKDYKKMVDDAGLRISSSHLTPSLREYTKENMPKF-D-- 113 (305)
T ss_dssp THHHHHHHHHHHTCCEEEECCBCTTTCCBCCC----CCCBCHHHHHHHHHHTTCEEEEEBCCCSCCCCCGGGHHHH-H--
T ss_pred CHHHHHHHHHHcCCCEEEecccccccccccCcCcccccccCHHHHHHHHHHCCCeEEEeeccccccccchhhHHHH-H--
Confidence 456666666554 677766532 0 11112 12478888999999998754 2 22 1 222 1
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccCChhHHH-------HHHHHHHHCCCeEccc
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL-------RYVRLVKSAGLKAKPK 149 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~-------~lI~~~~~~Gf~v~pE 149 (201)
+.+++.++.|++||.+.|=+....-..+++.+. ++.+.++++|+++-.|
T Consensus 114 -~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE 169 (305)
T 3obe_A 114 -EFWKKATDIHAELGVSCMVQPSLPRIENEDDAKVVSEIFNRAGEITKKAGILWGYH 169 (305)
T ss_dssp -HHHHHHHHHHHHHTCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred -HHHHHHHHHHHHcCCCEEEeCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 268999999999999999985322223444443 4556677888887443
No 187
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=70.95 E-value=5.3 Score=38.67 Aligned_cols=46 Identities=20% Similarity=0.292 Sum_probs=37.8
Q ss_pred chHHHHHHHHHHcCCCEEEecCCc---------ccCChhHHHHHHHHHHHCCCeE
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGS---------LEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGt---------i~i~~~~r~~lI~~~~~~Gf~v 146 (201)
+..++|++.|.++||++|=|++|= ...|..+..+|++.+++.|.++
T Consensus 309 ~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i 363 (641)
T 3a24_A 309 PTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGI 363 (641)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEE
Confidence 468999999999999999998873 2334556789999999999887
No 188
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=70.76 E-value=8.9 Score=32.63 Aligned_cols=51 Identities=10% Similarity=-0.031 Sum_probs=37.5
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCc------c-----cCC---hhHHHHHHHHHHHCCCeEcccc
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGS------L-----EIP---EETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGt------i-----~i~---~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+..+++.++.+|++||++|-+.--+ + ..+ .+...++|+.++++|++|..++
T Consensus 41 ~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~~~~~~~~~ld~~i~~a~~~Gi~vil~l 105 (373)
T 1rh9_A 41 RIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMSL 105 (373)
T ss_dssp THHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTEECHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCEEEECeecCCCCccccCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 4579999999999999999975321 1 111 2334578899999999997754
No 189
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=70.45 E-value=50 Score=28.13 Aligned_cols=90 Identities=11% Similarity=0.079 Sum_probs=53.6
Q ss_pred ccEEEeeCccc-----cccChhHHHHHHHHHHhCCceecC---c-cHHHHH----HHhCC----------------chHH
Q 028948 54 VDGLKFSGGSH-----SLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHL----IRNGP----------------SAFK 104 (201)
Q Consensus 54 ID~lKfg~GTs-----~l~p~~~L~eKI~l~~~~gV~v~~---G-tlfE~a----l~qg~----------------~~~~ 104 (201)
++.+|++.+.+ ...+.+.+++-++.++++|.++.. . ...+.+ ...|. ..++
T Consensus 143 ~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G~~~~~~h~~~~~~~~~~~~~~ 222 (458)
T 1gkr_A 143 AVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQ 222 (458)
T ss_dssp CCEEEEESSCSBTTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHH
T ss_pred CcEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcCccchhhccccCCHHHHHHHHH
Confidence 67788765433 245678899999999999987653 2 233322 23331 1234
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 105 EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
+.++.+++.|... -+. -++..+=.++|+.+++.|+.+..
T Consensus 223 ~~~~la~~~g~~~-h~~----H~~~~~~~~~i~~~~~~G~~v~~ 261 (458)
T 1gkr_A 223 RALLLQKEAGCRL-IVL----HVSNPDGVELIHQAQSEGQDVHC 261 (458)
T ss_dssp HHHHHHHHHCCEE-EEC----CCCSHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhCCCE-EEE----eCCCHHHHHHHHHHHHCCCcEEE
Confidence 5666778888752 121 12222334677778888876543
No 190
>3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A
Probab=70.45 E-value=7.4 Score=36.03 Aligned_cols=51 Identities=16% Similarity=0.099 Sum_probs=37.9
Q ss_pred HHHHHHHHcCCCEEEecCC----------cccC----------ChhHHHHHHHHHHHCCCeEccccccccC
Q 028948 105 EYVEDCKQVGFDTIELNVG----------SLEI----------PEETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdG----------ti~i----------~~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
+-|+++++|||++|+++-= .-.. +.++..++|+.++++|++|.-.+=....
T Consensus 123 ~~l~~l~~lG~~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~ 193 (558)
T 3vgf_A 123 RKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHV 193 (558)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred HHHHHHHHcCCcEEEECCcccCCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccc
Confidence 3467889999999998632 1111 1478999999999999999776655443
No 191
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=69.96 E-value=6.7 Score=34.48 Aligned_cols=77 Identities=18% Similarity=0.190 Sum_probs=51.5
Q ss_pred ccChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccC--C----hhHHHHH---H
Q 028948 66 LMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEI--P----EETLLRY---V 136 (201)
Q Consensus 66 l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i--~----~~~r~~l---I 136 (201)
.-..+.|++.|+-++++||.|+. |+ + --.+-++.++++|.++||+-.|..-- . .++..++ .
T Consensus 138 ~~~~~~L~~~i~~L~~~GIrVSL--FI------D--pd~~qI~aA~~~GAd~IELhTG~YA~a~~~~~~~~el~rl~~aA 207 (278)
T 3gk0_A 138 VGHFDAVRAACKQLADAGVRVSL--FI------D--PDEAQIRAAHETGAPVIELHTGRYADAHDAAEQQREFERIATGV 207 (278)
T ss_dssp TTTHHHHHHHHHHHHHTTCEEEE--EE------C--SCHHHHHHHHHHTCSEEEECCHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHCCCEEEE--Ee------C--CCHHHHHHHHHhCcCEEEEecchhhccCCchhHHHHHHHHHHHH
Confidence 44567799999999999999985 11 2 12345778899999999998774421 1 1233333 3
Q ss_pred HHHHHCCCeEcccccc
Q 028948 137 RLVKSAGLKAKPKFAV 152 (201)
Q Consensus 137 ~~~~~~Gf~v~pE~g~ 152 (201)
+.+++.||.|-.-=|.
T Consensus 208 ~~A~~lGL~VnAGHGL 223 (278)
T 3gk0_A 208 DAGIALGLKVNAGHGL 223 (278)
T ss_dssp HHHHHTTCEEEECTTC
T ss_pred HHHHHcCCEEecCCCC
Confidence 4467889998553333
No 192
>3icg_A Endoglucanase D; cellulase, xylanase, carbohydrate binding DOM glucanase, carbohydrate metabolism, cellulose degradation, glycosidase; HET: BTB; 2.10A {Clostridium cellulovorans}
Probab=69.94 E-value=4.1 Score=37.21 Aligned_cols=52 Identities=15% Similarity=0.222 Sum_probs=38.8
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcc---------cCCh---hHHHHHHHHHHHCCCeEcccc
Q 028948 99 GPSAFKEYVEDCKQVGFDTIELNVGSL---------EIPE---ETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 99 g~~~~~eyl~~~k~lGFd~IEISdGti---------~i~~---~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+|...++.++.++++||++|-|+-.-- .+.+ +...++|+.++++|++|+..+
T Consensus 43 ~~~~t~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~d~vv~~a~~~Gi~vildl 106 (515)
T 3icg_A 43 NPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINL 106 (515)
T ss_dssp CCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred CCcCCHHHHHHHHHCCCCEEEEccchHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEec
Confidence 355678999999999999999965422 2222 445678999999999995543
No 193
>2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12}
Probab=69.91 E-value=5.5 Score=37.74 Aligned_cols=50 Identities=16% Similarity=0.250 Sum_probs=37.2
Q ss_pred HHHHHHHcCCCEEEecC-------------------Ccc---------cCC------hhHHHHHHHHHHHCCCeEccccc
Q 028948 106 YVEDCKQVGFDTIELNV-------------------GSL---------EIP------EETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 106 yl~~~k~lGFd~IEISd-------------------Gti---------~i~------~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
-++++|+|||++|+++- |.- ... .++..++|+.++++|++|+-.+=
T Consensus 184 ~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~VilD~V 263 (657)
T 2wsk_A 184 MINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIV 263 (657)
T ss_dssp HHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred chHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEEEEEe
Confidence 47788999999999872 221 122 58999999999999999966554
Q ss_pred cccC
Q 028948 152 VMFN 155 (201)
Q Consensus 152 ~k~~ 155 (201)
....
T Consensus 264 ~NH~ 267 (657)
T 2wsk_A 264 LNHS 267 (657)
T ss_dssp CSCC
T ss_pred eccc
Confidence 4443
No 194
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=69.42 E-value=7.9 Score=32.50 Aligned_cols=67 Identities=22% Similarity=0.136 Sum_probs=51.5
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCCCC-cccccccccccEEEecccCc
Q 028948 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSD-IPSDRDRAFGAYVARAPRST 178 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~~d-l~ag~~~a~g~~Vi~E~Res 178 (201)
..+++++|.++|-|-----.+...+-.+.++.+.+.||.|..|+|-...... ...+.+ .|..|+|..
T Consensus 78 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~~~~-----iIayep~wa 145 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAPDPRTSLAAAALGPH-----AVAVEPPEL 145 (226)
T ss_dssp HHHHHHHTCCEEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTCCS-----EEEECCGGG
T ss_pred HHHHHHcCCCEEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCC-----EEEEcChhh
Confidence 7899999999999987776677777889999999999999999986543211 112333 777888863
No 195
>1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=69.36 E-value=7 Score=37.76 Aligned_cols=48 Identities=15% Similarity=0.175 Sum_probs=36.1
Q ss_pred HHHHHHcCCCEEEecC----------------------Cccc---------C-C-------hhHHHHHHHHHHHCCCeEc
Q 028948 107 VEDCKQVGFDTIELNV----------------------GSLE---------I-P-------EETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 107 l~~~k~lGFd~IEISd----------------------Gti~---------i-~-------~~~r~~lI~~~~~~Gf~v~ 147 (201)
++++|+|||++||++= |.-. . + .++..++|+.++++|++|.
T Consensus 211 l~yLk~LGvt~V~L~Pi~~~~~~~~~~~~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi~Vi 290 (750)
T 1bf2_A 211 ASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGIKVY 290 (750)
T ss_dssp HHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHcCCCEEEECCcccCccccccccccccccccccCcCcccccccCccccCCCCCccHHHHHHHHHHHHHHCCCEEE
Confidence 7788999999999861 2111 1 1 6899999999999999996
Q ss_pred ccccccc
Q 028948 148 PKFAVMF 154 (201)
Q Consensus 148 pE~g~k~ 154 (201)
-.+=...
T Consensus 291 lDvV~NH 297 (750)
T 1bf2_A 291 MDVVYNH 297 (750)
T ss_dssp EEECCSS
T ss_pred EEEeccc
Confidence 5554443
No 196
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=69.34 E-value=9.7 Score=38.95 Aligned_cols=125 Identities=8% Similarity=-0.026 Sum_probs=84.4
Q ss_pred cccEEEeeCccccccChhHHHHHHHHHHhCCceecC----ccHHHHHHH--hCCchHHHHHHHHHHcCCCEEEecCCccc
Q 028948 53 FVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIR--NGPSAFKEYVEDCKQVGFDTIELNVGSLE 126 (201)
Q Consensus 53 yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~----GtlfE~al~--qg~~~~~eyl~~~k~lGFd~IEISdGti~ 126 (201)
-+|.+-+-.. +-+-+.+++-++.++++|..+.. .+-||-... .+++.+-+..+.+.++|.+.|=|-|-.--
T Consensus 658 g~d~irif~s---l~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~ 734 (1165)
T 2qf7_A 658 GIDLFRVFDC---LNWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVELEKAGAHIIAVKDMAGL 734 (1165)
T ss_dssp TCCEEEEECT---TCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHHHHHTTCSEEEEEETTCC
T ss_pred CcCEEEEEee---HHHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCccCC
Confidence 4777766432 34456799999999999965322 222333322 23344667777788899999999999988
Q ss_pred CChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEecccCcCeeccccCCcee
Q 028948 127 IPEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIE 190 (201)
Q Consensus 127 i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~~~~ 190 (201)
+.+.+-.++|+.++++ + ...+++...+ ..+++|++ +++.-=+|.=+-+.||.+|
T Consensus 735 ~~P~~~~~lv~~l~~~-~--~~~i~~H~Hnd~GlAvAn~laAv~aGa~-------~vd~ti~GlGe~~Gn~~le 798 (1165)
T 2qf7_A 735 LKPAAAKVLFKALREA-T--GLPIHFHTHDTSGIAAATVLAAVEAGVD-------AVDAAMDALSGNTSQPCLG 798 (1165)
T ss_dssp CCHHHHHHHHHHHHHH-C--SSCEEEEECBTTSCHHHHHHHHHHTTCS-------EEEEBCGGGCSBTSCCBHH
T ss_pred cCHHHHHHHHHHHHHh-c--CCeEEEEECCCCCHHHHHHHHHHHhCCC-------EEEecccccCCCccchhHH
Confidence 8899988999999886 3 2334443322 44778888 4444455555568899887
No 197
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=69.24 E-value=7.3 Score=37.66 Aligned_cols=51 Identities=20% Similarity=0.219 Sum_probs=38.1
Q ss_pred HHHHHHHHHHcCCCEEEecCCc----------------------------------ccC-----ChhHHHHHHHHHHHCC
Q 028948 103 FKEYVEDCKQVGFDTIELNVGS----------------------------------LEI-----PEETLLRYVRLVKSAG 143 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGt----------------------------------i~i-----~~~~r~~lI~~~~~~G 143 (201)
+.+-|+++++|||++|+++--+ ..+ +.++..++|+.++++|
T Consensus 255 i~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~G 334 (695)
T 3zss_A 255 AARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLG 334 (695)
T ss_dssp HGGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCC
Confidence 3445788999999999987311 122 2489999999999999
Q ss_pred CeEccccccc
Q 028948 144 LKAKPKFAVM 153 (201)
Q Consensus 144 f~v~pE~g~k 153 (201)
++|.-.+=.+
T Consensus 335 I~VilD~V~N 344 (695)
T 3zss_A 335 LEIALDFALQ 344 (695)
T ss_dssp CEEEEEECCE
T ss_pred CEEEEEeecc
Confidence 9997665443
No 198
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=69.16 E-value=9.4 Score=33.53 Aligned_cols=45 Identities=13% Similarity=0.252 Sum_probs=34.7
Q ss_pred HHHHHHHHHcCCCEEEec---------CCc------ccCChhHHHHHHHHHHHCCCeEcc
Q 028948 104 KEYVEDCKQVGFDTIELN---------VGS------LEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEIS---------dGt------i~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
.+-++.++++|+++|-|. .+. -+.+.+.-.++|++|++.||+|.-
T Consensus 56 ~~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 56 RASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp HHHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 467888899999999883 111 124677888999999999999944
No 199
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=69.05 E-value=6 Score=40.70 Aligned_cols=51 Identities=8% Similarity=0.098 Sum_probs=37.6
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccC-------------------------------ChhHHHHHHHHHHHCCCeEccccc
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLEI-------------------------------PEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~i-------------------------------~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
+.+=++++++||+++||++=-+-.. +.++..++|+.++++|++|+-.+=
T Consensus 855 I~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 855 IAKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp HHHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 4444788899999999997333211 346899999999999999966544
Q ss_pred cc
Q 028948 152 VM 153 (201)
Q Consensus 152 ~k 153 (201)
..
T Consensus 935 ~N 936 (1108)
T 3ttq_A 935 DN 936 (1108)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 200
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=68.71 E-value=7.1 Score=33.69 Aligned_cols=43 Identities=12% Similarity=0.060 Sum_probs=22.3
Q ss_pred HHHHHHHHc-CCCEEEecCCc----ccCChhHHHHHHHHHHHCCCeEc
Q 028948 105 EYVEDCKQV-GFDTIELNVGS----LEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 105 eyl~~~k~l-GFd~IEISdGt----i~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
+-++.++++ ||+.||+.-.- -.++.++..++.+.+.+.||++.
T Consensus 25 ~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~~~~~~~l~~~GL~i~ 72 (367)
T 1tz9_A 25 IPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGLALL 72 (367)
T ss_dssp SCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHHHHHHHHHHHCCCeEE
Confidence 335555666 66666654221 12344455555566666666653
No 201
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=68.69 E-value=12 Score=30.28 Aligned_cols=89 Identities=16% Similarity=0.232 Sum_probs=55.7
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCCCCcc---c---ccccccccEEEecccC
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIP---S---DRDRAFGAYVARAPRS 177 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~~dl~---a---g~~~a~g~~Vi~E~Re 177 (201)
++|++.|.+.|.|.|-+-.+..+.+ ..+.++.+++.|+++...+.-....+.+. . +.| ||.+-+..
T Consensus 77 ~~~i~~~~~agad~v~vH~~~~~~~---~~~~~~~i~~~g~~igv~~~p~t~~e~~~~~~~~~~~~d-----~vl~~sv~ 148 (228)
T 1h1y_A 77 SDYVEPLAKAGASGFTFHIEVSRDN---WQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVE-----LVLVMTVE 148 (228)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCTTT---HHHHHHHHHHTTCEEEEEECTTSCGGGGHHHHHSSSCCS-----EEEEESSC
T ss_pred HHHHHHHHHcCCCEEEECCCCcccH---HHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCCCCC-----EEEEEeec
Confidence 5578888899999998888765533 14677888888988764442222212221 2 667 88774443
Q ss_pred cC---eecc-------c------cCCceeeeeccccccc
Q 028948 178 TD---KLFL-------A------SNPEIEVGVGINKSRI 200 (201)
Q Consensus 178 s~---~v~~-------~------~~~~~~~~~~~~~~~~ 200 (201)
.| .-+. . .|..|.|+-|||...+
T Consensus 149 pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni 187 (228)
T 1h1y_A 149 PGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTI 187 (228)
T ss_dssp TTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTH
T ss_pred CCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHH
Confidence 22 2211 1 2666889999997653
No 202
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=68.31 E-value=18 Score=29.67 Aligned_cols=88 Identities=23% Similarity=0.271 Sum_probs=56.0
Q ss_pred HHHHHHHHHcCCCEEEecCC--cccCChhHHHHHHHHHHHCCCeEccccccccCC---CCcccccccccccEEEecccCc
Q 028948 104 KEYVEDCKQVGFDTIELNVG--SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK---SDIPSDRDRAFGAYVARAPRST 178 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdG--ti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~---~dl~ag~~~a~g~~Vi~E~Res 178 (201)
++|++.|.+.|.|.|-|-.. .. ++-.++++.+++.|.++-..+.-.... ..+..+.| ||.+=+.+.
T Consensus 75 ~~~i~~~~~aGadgv~vh~e~~~~----~~~~~~~~~i~~~g~~~gv~~~p~t~~e~~~~~~~~~D-----~v~~msv~p 145 (230)
T 1tqj_A 75 EKYVEDFAKAGADIISVHVEHNAS----PHLHRTLCQIRELGKKAGAVLNPSTPLDFLEYVLPVCD-----LILIMSVNP 145 (230)
T ss_dssp GGTHHHHHHHTCSEEEEECSTTTC----TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCS-----EEEEESSCC
T ss_pred HHHHHHHHHcCCCEEEECcccccc----hhHHHHHHHHHHcCCcEEEEEeCCCcHHHHHHHHhcCC-----EEEEEEecc
Confidence 56889999999999988876 43 345688999999999885555322222 23334666 764433333
Q ss_pred Ce---ecc------------cc-----CCceeeeeccccccc
Q 028948 179 DK---LFL------------AS-----NPEIEVGVGINKSRI 200 (201)
Q Consensus 179 ~~---v~~------------~~-----~~~~~~~~~~~~~~~ 200 (201)
++ -+. .. |..|+|+-|||.+.+
T Consensus 146 g~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~~~~~ 187 (230)
T 1tqj_A 146 GFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNT 187 (230)
T ss_dssp ----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTT
T ss_pred ccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcCHHHH
Confidence 21 110 11 677999999997654
No 203
>2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A
Probab=68.21 E-value=6.5 Score=37.79 Aligned_cols=50 Identities=18% Similarity=0.208 Sum_probs=37.1
Q ss_pred HHHHHHHcCCCEEEecC-------------------Cccc---------CC--------hhHHHHHHHHHHHCCCeEccc
Q 028948 106 YVEDCKQVGFDTIELNV-------------------GSLE---------IP--------EETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 106 yl~~~k~lGFd~IEISd-------------------Gti~---------i~--------~~~r~~lI~~~~~~Gf~v~pE 149 (201)
-++++|+|||++|+++= |.-. .. .++..++|+.++++|++|.-.
T Consensus 207 ~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~VilD 286 (718)
T 2vr5_A 207 MISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVIID 286 (718)
T ss_dssp HHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred hhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEEE
Confidence 37788999999999871 2211 11 489999999999999999665
Q ss_pred cccccC
Q 028948 150 FAVMFN 155 (201)
Q Consensus 150 ~g~k~~ 155 (201)
+=....
T Consensus 287 vV~NH~ 292 (718)
T 2vr5_A 287 VVYNHT 292 (718)
T ss_dssp ECCSCC
T ss_pred eccCcc
Confidence 544433
No 204
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=68.02 E-value=8.2 Score=37.50 Aligned_cols=51 Identities=20% Similarity=0.280 Sum_probs=40.8
Q ss_pred CchHHHHHHHHHHcCCCEEEe---------cCCcccCCh-hHHHHHHHHHHHCCCeEcccc
Q 028948 100 PSAFKEYVEDCKQVGFDTIEL---------NVGSLEIPE-ETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEI---------SdGti~i~~-~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
++..++-++.+|++||++|++ ..|..+.+- .+..++|+.|+++|+.|+-..
T Consensus 39 ~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~fl~~a~~~GL~ViLr~ 99 (654)
T 3thd_A 39 RFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEYFLRLAHELGLLVILRP 99 (654)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCccCccchHHHHHHHHHHHHcCCEEEecc
Confidence 457888899999999999988 556666553 457899999999999996543
No 205
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=67.95 E-value=4.4 Score=36.24 Aligned_cols=127 Identities=13% Similarity=0.006 Sum_probs=83.2
Q ss_pred ccEEEeeCccccccCh-----------hHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecC
Q 028948 54 VDGLKFSGGSHSLMPK-----------PFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 54 ID~lKfg~GTs~l~p~-----------~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISd 122 (201)
+|.+-+-..+|-++.+ +.+++-++.++++|..|..+. |.+-..+++.+-+.++.+.+.|.+.|-|.|
T Consensus 101 ~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~--ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~D 178 (370)
T 3rmj_A 101 KKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSC--EDALRSEIDFLAEICGAVIEAGATTINIPD 178 (370)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEE--ETGGGSCHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEec--CCCCccCHHHHHHHHHHHHHcCCCEEEecC
Confidence 5666666666655432 235567889999999876652 333445556788888899999999999999
Q ss_pred CcccCChhHHHHHHHHHHHCCCeE--ccccccccCC----------CCcccccccccccEEEecccCcCeeccccCCcee
Q 028948 123 GSLEIPEETLLRYVRLVKSAGLKA--KPKFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDKLFLASNPEIE 190 (201)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~Gf~v--~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~~~~ 190 (201)
-.--+.+.+-.++|+.++++ +.. ...+++.+.+ ..+.+|++ .|-..- .|.=+-+.|+++|
T Consensus 179 T~G~~~P~~~~~lv~~l~~~-~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~-----~vd~tv--~GlGeraGN~~lE 250 (370)
T 3rmj_A 179 TVGYSIPYKTEEFFRELIAK-TPNGGKVVWSAHCHNDLGLAVANSLAALKGGAR-----QVECTV--NGLGERAGNASVE 250 (370)
T ss_dssp SSSCCCHHHHHHHHHHHHHH-STTGGGSEEEEECBCTTSCHHHHHHHHHHTTCC-----EEEEBG--GGCSSTTCBCBHH
T ss_pred ccCCcCHHHHHHHHHHHHHh-CCCcCceEEEEEeCCCCChHHHHHHHHHHhCCC-----EEEEec--cccCcccccccHH
Confidence 99888899889999999886 211 1223443322 33667777 443322 2222356777766
No 206
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=67.92 E-value=6.1 Score=34.42 Aligned_cols=46 Identities=20% Similarity=0.275 Sum_probs=35.9
Q ss_pred ChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC
Q 028948 68 PKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG 123 (201)
Q Consensus 68 p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdG 123 (201)
..+.|++.|+.+|++||.|+. | =+ --.+-++.++++|.++||+-.|
T Consensus 109 ~~~~L~~~i~~L~~~GIrVSL--F------ID--pd~~qi~aA~~~GAd~IELhTG 154 (260)
T 3o6c_A 109 NHAKLKQSIEKLQNANIEVSL--F------IN--PSLEDIEKSKILKAQFIELHTG 154 (260)
T ss_dssp TCTTHHHHHHHHHHTTCEEEE--E------EC--SCHHHHHHHHHTTCSEEEECCH
T ss_pred CHHHHHHHHHHHHHCCCEEEE--E------eC--CCHHHHHHHHHhCCCEEEEech
Confidence 556799999999999999985 1 12 1134577889999999999777
No 207
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=67.58 E-value=5.6 Score=37.65 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=37.2
Q ss_pred HHHHHH--HHHHcCCCEEEecCCcc------------------------cC-----ChhHHHHHHHHHHHCCCeEccccc
Q 028948 103 FKEYVE--DCKQVGFDTIELNVGSL------------------------EI-----PEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 103 ~~eyl~--~~k~lGFd~IEISdGti------------------------~i-----~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
+.+-|+ ++++|||++|.||-=+- .+ +.++..+||+.++++|++|.-.+=
T Consensus 54 i~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~V 133 (680)
T 1cyg_A 54 IINKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFA 133 (680)
T ss_dssp HHHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 344477 78999999999984211 11 368999999999999999955443
Q ss_pred cc
Q 028948 152 VM 153 (201)
Q Consensus 152 ~k 153 (201)
..
T Consensus 134 ~N 135 (680)
T 1cyg_A 134 PN 135 (680)
T ss_dssp TT
T ss_pred CC
Confidence 33
No 208
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=67.19 E-value=8.6 Score=37.29 Aligned_cols=57 Identities=16% Similarity=0.369 Sum_probs=43.7
Q ss_pred cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-------------CChh----HHHHHHHHHHHCCCeE
Q 028948 90 DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-------------IPEE----TLLRYVRLVKSAGLKA 146 (201)
Q Consensus 90 tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~-------------i~~~----~r~~lI~~~~~~Gf~v 146 (201)
+|--.....+.+.+.+.++.++++|+++|-|.||-.. .+++ -...+++++++.||++
T Consensus 335 sW~~~~~~~~e~~i~~~ad~~~~~G~~~~viDDgW~~~r~~~~~~~Gdw~~d~~kFP~Glk~lvd~ih~~Glk~ 408 (720)
T 2yfo_A 335 SWEAAYFDFTGDTIVDLAKEAASLGIDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKF 408 (720)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHHHHTCCEEEECSSSBTTCSSTTSCTTCCSBCHHHHTSCHHHHHHHHHHTTCEE
T ss_pred chHHhCcCCCHHHHHHHHHHHHHcCCcEEEECcccccCCCcccccCCCCeeChhhcCccHHHHHHHHHHCCCEE
Confidence 6765554444458999999999999999999998741 1111 2668999999999998
No 209
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=67.16 E-value=9.6 Score=31.56 Aligned_cols=16 Identities=13% Similarity=0.345 Sum_probs=8.7
Q ss_pred HHHHHHHHHHcCCCEE
Q 028948 103 FKEYVEDCKQVGFDTI 118 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~I 118 (201)
+++.+++|++.|+..|
T Consensus 76 ~d~~v~~a~~~Gi~vi 91 (317)
T 3aof_A 76 VDEVINGALKRGLAVV 91 (317)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHCCCEEE
Confidence 4555555555555554
No 210
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=67.01 E-value=11 Score=33.17 Aligned_cols=43 Identities=14% Similarity=0.270 Sum_probs=27.1
Q ss_pred HHHHHHHHHhCCc-----eecCcc-HHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 028948 72 IEEVVKRAHQHDV-----YVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 72 L~eKI~l~~~~gV-----~v~~Gt-lfE~al~qg~~~~~eyl~~~k~lGFd~I 118 (201)
+.+-++.+++.|+ ++++|+ |-+. .. +.+++++++|++.|+-+|
T Consensus 56 ~~~~i~~lk~~G~N~VRip~~~~~~~~~~-~l---~~ld~~v~~a~~~GiyVI 104 (345)
T 3jug_A 56 ASTAIPAIAEQGANTIRIVLSDGGQWEKD-DI---DTVREVIELAEQNKMVAV 104 (345)
T ss_dssp HHHHHHHHHHTTCSEEEEEECCSSSSCCC-CH---HHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHcCCCEEEEEecCCCccCHH-HH---HHHHHHHHHHHHCCCEEE
Confidence 5667777888886 333342 4221 11 267888888888888765
No 211
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=66.96 E-value=7.5 Score=32.58 Aligned_cols=67 Identities=21% Similarity=0.117 Sum_probs=51.7
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCCCC-cccccccccccEEEecccCc
Q 028948 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSD-IPSDRDRAFGAYVARAPRST 178 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~~d-l~ag~~~a~g~~Vi~E~Res 178 (201)
..+++++|.++|-|-----.+...+-.+.++.+.+.||.|..|+|-...... ...+.+ .|..|+|..
T Consensus 81 ~~~l~~~Ga~~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVge~~e~~~~~~~~~~-----iIayep~wa 148 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSNNPAVSAAVAALNPD-----YVAVEPPEL 148 (225)
T ss_dssp HHHHHHTTCCEEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCCS-----EEEECCTTT
T ss_pred HHHHHHcCCCEEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCC-----EEEEeChhh
Confidence 7899999999999977765577777889999999999999999986543211 122334 788888864
No 212
>3n3m_A Orotidine 5'-phosphate decarboxylase; P. falciparum, 5'-monophosphate decarboxylase, 6- UMP, lyase; HET: PGE NUP; 1.47A {Plasmodium falciparum} SCOP: c.1.2.3 PDB: 2qaf_A* 3bar_A* 2q8z_A* 3mwa_A* 3n2m_A* 3bpw_A* 3n34_A* 3s9y_A* 2f84_A 2q8l_A 2za1_A* 2za2_A 2za3_A* 2zcg_A 3vi2_A*
Probab=66.71 E-value=6.4 Score=35.29 Aligned_cols=73 Identities=10% Similarity=0.037 Sum_probs=52.9
Q ss_pred HHHHHhhcccccEEEeeCccccccCh---hHHHHHHHHHHhCCceecCc-cHHHHHHHhCCchHHHHHHHH-HHcCCCEE
Q 028948 44 EDIFESMGQFVDGLKFSGGSHSLMPK---PFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDC-KQVGFDTI 118 (201)
Q Consensus 44 ~DlLe~ag~yID~lKfg~GTs~l~p~---~~L~eKI~l~~~~gV~v~~G-tlfE~al~qg~~~~~eyl~~~-k~lGFd~I 118 (201)
..+++..++|++++|+|+.-..-+.. +.|++-++.++++|..|..- =+..+ |+-+..|.+.+ ..+|.|+|
T Consensus 107 ~~lvd~l~~~v~~vKvG~~lf~~~G~~gv~~l~~l~~~l~~~g~~VflDlK~~DI-----pnTv~~ya~~~~~~lgaD~v 181 (342)
T 3n3m_A 107 FYIINETNKYALTFKMNFAFYIPYGSVGIDVLKNVFDYLYELNIPTILDMKINDI-----GNTVKNYRKFIFEYLKSDSC 181 (342)
T ss_dssp HHHHHHHGGGCSEEEEEGGGTSTTTHHHHHHHHHHHHHHHHHTCCEEEEEEECCC-----HHHHHHHHHHHHTTSCCSEE
T ss_pred HHHHHHhcCcCcEEEecHHHHHhcCHHHHHHHHHHHHHHHhCCCeEEEEeecCCc-----HHHHHHHHHHHHHhcCCCEE
Confidence 37999999999999999877665554 35788888899989887753 12222 22445566655 67899999
Q ss_pred Eec
Q 028948 119 ELN 121 (201)
Q Consensus 119 EIS 121 (201)
-|+
T Consensus 182 TVh 184 (342)
T 3n3m_A 182 TVN 184 (342)
T ss_dssp EEC
T ss_pred EEc
Confidence 885
No 213
>3qw3_A Orotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative (OMPDCASE-OPRTASE,...; orotidine monophosphate decarboxylase; 1.70A {Leishmania infantum}
Probab=66.66 E-value=3.6 Score=35.04 Aligned_cols=91 Identities=10% Similarity=0.145 Sum_probs=59.8
Q ss_pred ceeEecCCCCCCcc-hhHHHHHHHhhcccccEEEeeCccccccChh---HHHHHHHHHHhCCceecCc-cHHHHHHHhCC
Q 028948 26 VTEMRSPHYTLSSS-HNVLEDIFESMGQFVDGLKFSGGSHSLMPKP---FIEEVVKRAHQHDVYVSTG-DWAEHLIRNGP 100 (201)
Q Consensus 26 lTmV~DkG~s~~~g-~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~---~L~eKI~l~~~~gV~v~~G-tlfE~al~qg~ 100 (201)
|-.=+||-...++. .++...+++..++|++++|.|..-..-+..+ .|++.++.++ .|..|..- =+..+ |
T Consensus 16 LcVgLD~~~~~~~~~~~~~~~lv~~l~~~v~~~Kvg~~lf~~~G~~g~~~l~~l~~~~~-~g~~VflDlK~~DI-----~ 89 (255)
T 3qw3_A 16 LCVGLDPRAKTAAAAVEECKRLIEQTHEYAAAYKPNAAFFEFFGAEGWAALSEVIRAVP-AGIPVVLDAKRGDI-----A 89 (255)
T ss_dssp EEEEECCCCSSHHHHHHHHHHHHHHHGGGCSEEEEBHHHHHTTTHHHHHHHHHHHHHSC-TTCCBEEEEEECCC-----H
T ss_pred EEEEeCCCchhcchHHHHHHHHHHHhCCcCcEEEEcHHHHHhcCHHHHHHHHHHHHHhc-CCCeEEEEeecCCc-----H
Confidence 55557877543322 4678999999999999999998766666554 5666666554 67666542 12111 2
Q ss_pred chHHHHHHHH-HHcCCCEEEecC
Q 028948 101 SAFKEYVEDC-KQVGFDTIELNV 122 (201)
Q Consensus 101 ~~~~eyl~~~-k~lGFd~IEISd 122 (201)
+-+..|.+.+ +++|+|+|-|+-
T Consensus 90 nTv~~~a~~~~~~lg~d~vTvh~ 112 (255)
T 3qw3_A 90 DTADAYATSAFKHLNAHAITASP 112 (255)
T ss_dssp HHHHHHHHHHHTTSCCSEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcc
Confidence 2345566666 379999998863
No 214
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=66.62 E-value=39 Score=29.98 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=52.7
Q ss_pred HHHHHHH---hhcccccEEEeeCcc------ccccChhHHHHHHHHHHh--------CCce----ecCc-cHHHHHHHhC
Q 028948 42 VLEDIFE---SMGQFVDGLKFSGGS------HSLMPKPFIEEVVKRAHQ--------HDVY----VSTG-DWAEHLIRNG 99 (201)
Q Consensus 42 ~l~DlLe---~ag~yID~lKfg~GT------s~l~p~~~L~eKI~l~~~--------~gV~----v~~G-tlfE~al~qg 99 (201)
..+|+.+ ..++|.|++=+=.++ ..+..++.+.+.++..++ .+++ +.|+ +.
T Consensus 162 ~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~-------- 233 (367)
T 3zwt_A 162 AAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTS-------- 233 (367)
T ss_dssp HHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCH--------
T ss_pred CHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCH--------
Confidence 4555554 566778888776554 245667778888877654 3444 4444 22
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcccC
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGSLEI 127 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGti~i 127 (201)
+.+.++.+.|.+.|.|.|-+++.+...
T Consensus 234 -~~~~~ia~~~~~aGadgi~v~ntt~~r 260 (367)
T 3zwt_A 234 -QDKEDIASVVKELGIDGLIVTNTTVSR 260 (367)
T ss_dssp -HHHHHHHHHHHHHTCCEEEECCCBSCC
T ss_pred -HHHHHHHHHHHHcCCCEEEEeCCCccc
Confidence 257788899999999999999998654
No 215
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=66.17 E-value=8.3 Score=39.37 Aligned_cols=47 Identities=23% Similarity=0.240 Sum_probs=35.5
Q ss_pred HHHHHHcCCCEEEecCCcccC-------------------------------ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 107 VEDCKQVGFDTIELNVGSLEI-------------------------------PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~i-------------------------------~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
++++++||+++||++==+-.. +.++..++|+.++++|++|+-.+=..
T Consensus 692 ldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VIlDvV~N 769 (1039)
T 3klk_A 692 ADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADWVPD 769 (1039)
T ss_dssp HHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 668899999999996433221 24689999999999999996554433
No 216
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=66.17 E-value=5.9 Score=40.05 Aligned_cols=51 Identities=22% Similarity=0.335 Sum_probs=42.5
Q ss_pred chHHHHHHHHHHcCCCEEEe---------cCCcccCC-hhHHHHHHHHHHHCCCeEccccc
Q 028948 101 SAFKEYVEDCKQVGFDTIEL---------NVGSLEIP-EETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEI---------SdGti~i~-~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
+..++-++.+|++||++|++ ..|..+.+ ..+..++|+.|+++||.|+-..|
T Consensus 36 ~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl~~a~e~Gl~ViLr~G 96 (971)
T 1tg7_A 36 SLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFFDAAKEAGIYLLARPG 96 (971)
T ss_dssp GGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCeecccchHHHHHHHHHHHHcCCEEEEecC
Confidence 57888899999999999998 67777776 24567999999999999976555
No 217
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=65.80 E-value=17 Score=35.80 Aligned_cols=56 Identities=18% Similarity=0.432 Sum_probs=43.7
Q ss_pred cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc------------------CChhHHHHHHHHHHHCCCeE
Q 028948 90 DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE------------------IPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 90 tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~------------------i~~~~r~~lI~~~~~~Gf~v 146 (201)
+|--.....+.+++.++++.++++|++.+-|.||-.. .| +-...+|+.+++.||++
T Consensus 336 sW~~~~~d~tee~il~~ad~~~~~G~e~fviDDGW~~~r~~d~~~~Gdw~~d~~kFP-~Gl~~lv~~ih~~Glk~ 409 (745)
T 3mi6_A 336 NWEATYFDFNEAKLMTIVNQAKRLGIEMFVLDDGWFGHRDDDTTSLGDWFVDQRKFP-DGIEHFSQAVHQQGMKF 409 (745)
T ss_dssp CHHHHTTCCCHHHHHHHHHHHHHHTCCEEEECTTCBTTCSSTTSCTTCCSBCTTTCT-THHHHHHHHHHHTTCEE
T ss_pred chHhhCcCCCHHHHHHHHHHHHHcCCcEEEECcccccCCCCCcccCCCceeChhhcC-ccHHHHHHHHHHCCCEE
Confidence 6855443334458999999999999999999998742 22 23569999999999998
No 218
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis}
Probab=65.74 E-value=10 Score=36.88 Aligned_cols=50 Identities=16% Similarity=0.185 Sum_probs=36.6
Q ss_pred HHHHHHHHcCCCEEEecCCc----------ccC----------ChhHHHHHHHHHHHCCCeEcccccccc
Q 028948 105 EYVEDCKQVGFDTIELNVGS----------LEI----------PEETLLRYVRLVKSAGLKAKPKFAVMF 154 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGt----------i~i----------~~~~r~~lI~~~~~~Gf~v~pE~g~k~ 154 (201)
+.++++++|||++|+++-=+ -.. +.++..++|+.++++|++|.-.+=...
T Consensus 268 ~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH 337 (722)
T 3k1d_A 268 ELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVPAH 337 (722)
T ss_dssp HHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred HHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEEEEEeec
Confidence 44578899999999986321 111 258889999999999999965554433
No 219
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=65.74 E-value=6.3 Score=30.78 Aligned_cols=64 Identities=28% Similarity=0.247 Sum_probs=52.3
Q ss_pred HHHHhCCc-eecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 77 KRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 77 ~l~~~~gV-~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
++++++|| .+.. |-..++|+.+- .. .+.++||+.+=++|.+-+.+++.....++..+..|-.+.
T Consensus 113 ~~L~~~gi~~lvi~G~~t~~CV~~T--a~-----da~~~Gy~v~vv~Da~~~~~~~~h~~al~~m~~~g~~v~ 178 (180)
T 1im5_A 113 KILRGNGVKRVYICGVATEYCVRAT--AL-----DALKHGFEVYLLRDAVKGIKPEDEERALEEMKSRGIKIV 178 (180)
T ss_dssp HHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHhCCCCEEEEEEeecCHHHHHH--HH-----HHHHCCCEEEEehhhccCCCHHHHHHHHHHHHHcCCEEE
Confidence 45677899 4444 77889998885 33 356789999999999999999999999999999987764
No 220
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=65.55 E-value=11 Score=33.32 Aligned_cols=74 Identities=9% Similarity=0.112 Sum_probs=46.5
Q ss_pred ccChhHHHHHHHHHHhCCceecC----c--cH-HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc--------ccCChh
Q 028948 66 LMPKPFIEEVVKRAHQHDVYVST----G--DW-AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS--------LEIPEE 130 (201)
Q Consensus 66 l~p~~~L~eKI~l~~~~gV~v~~----G--tl-fE~al~qg~~~~~eyl~~~k~lGFd~IEISdGt--------i~i~~~ 130 (201)
.++.+.|++-|+....++..+.- . +| +|+-. .+ +.. . +++.=+.|. --.+.+
T Consensus 29 f~~~~~ik~~id~mA~~KlN~lH~HltDdq~~rle~~~-~~-~~~-------~----~~~~~~~g~~~~~~~~~g~YT~~ 95 (367)
T 1yht_A 29 FYSPEVIKSFIDTISLSGGNFLHLHFSDHENYAIESHL-LN-QRA-------E----NAVQGKDGIYINPYTGKPFLSYR 95 (367)
T ss_dssp CCCHHHHHHHHHHHHHTTCCEEEEECBSSSCBCBCBTT-TT-BCG-------G----GSEECTTSCEECTTTCCEEBCHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEEcCCCceeeecc-hh-hhh-------h----hhccccCCCcCCCCCCCCCcCHH
Confidence 67888999999999988885541 2 33 22100 00 000 0 000001221 248999
Q ss_pred HHHHHHHHHHHCCCeEcccccc
Q 028948 131 TLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 131 ~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
+-.++++.|+++|.+|.||+-.
T Consensus 96 di~eiv~YA~~rgI~VIPEID~ 117 (367)
T 1yht_A 96 QLDDIKAYAKAKGIELIPELDS 117 (367)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEeccc
Confidence 9999999999999999999754
No 221
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=65.44 E-value=7.1 Score=32.98 Aligned_cols=50 Identities=16% Similarity=0.286 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccC----------------------ChhHHHHHHHHHHHCCCeEccccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEI----------------------PEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i----------------------~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
.+++.++.++++||++|-|.-..-.+ ..+...++|+.++++|++|..++-
T Consensus 45 ~~~~~~~~~~~~G~n~vRi~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h 116 (358)
T 1ece_A 45 DYRSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRH 116 (358)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHHcCCCEEEeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecC
Confidence 47899999999999999887431111 123346789999999999966553
No 222
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=65.42 E-value=26 Score=27.60 Aligned_cols=102 Identities=11% Similarity=0.061 Sum_probs=60.7
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecC-----ccHHHH--HHHhCC-------chHHHHH
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-----GDWAEH--LIRNGP-------SAFKEYV 107 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~-----GtlfE~--al~qg~-------~~~~eyl 107 (201)
..=+.+..+| .|++-+.+ -++. .+++.-++++++|+.+.. +.|..- .+..++ +.+++.+
T Consensus 19 ~~l~~~~~~G--~~~vEl~~----~~~~-~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 1k77_A 19 ERFAAARKAG--FDAVEFLF----PYNY-STLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLAL 91 (260)
T ss_dssp GHHHHHHHHT--CSEEECSC----CTTS-CHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhC--CCEEEecC----CCCC-CHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHH
Confidence 3334444455 55555543 1222 377778889999997663 224210 000000 2688999
Q ss_pred HHHHHcCCCEEEecCCccc--CCh-h-------HHHHHHHHHHHCCCeEcccc
Q 028948 108 EDCKQVGFDTIELNVGSLE--IPE-E-------TLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 108 ~~~k~lGFd~IEISdGti~--i~~-~-------~r~~lI~~~~~~Gf~v~pE~ 150 (201)
+.|++||.+.|=+..|... .+. + ...++.+.+++.|+++..|-
T Consensus 92 ~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~ 144 (260)
T 1k77_A 92 EYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEA 144 (260)
T ss_dssp HHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECC
T ss_pred HHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 9999999999988777652 222 2 22355566778888875554
No 223
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=65.38 E-value=2.5 Score=36.73 Aligned_cols=75 Identities=17% Similarity=0.307 Sum_probs=42.5
Q ss_pred hHHHHHHHHHHhC-----CceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHHHHHH
Q 028948 70 PFIEEVVKRAHQH-----DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRYVRLV 139 (201)
Q Consensus 70 ~~L~eKI~l~~~~-----gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~-----i~~~~r~~lI~~~ 139 (201)
..+.|.++-.++. +|++++..|.+--+ ..+...++.+.+.+.|.++|+||+|+.. .++.....+++.+
T Consensus 195 r~~~eiv~avr~~v~~pv~vris~~~~~~~g~--~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~i 272 (338)
T 1z41_A 195 RFLREIIDEVKQVWDGPLFVRVSASDYTDKGL--DIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKI 272 (338)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEEECCCCSTTSC--CHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCcccCCCCC--CHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHH
Confidence 3456666666543 34566644433100 0113556778888899999999999753 2222234666666
Q ss_pred HHC-CCeE
Q 028948 140 KSA-GLKA 146 (201)
Q Consensus 140 ~~~-Gf~v 146 (201)
++. ...|
T Consensus 273 r~~~~iPV 280 (338)
T 1z41_A 273 REQADMAT 280 (338)
T ss_dssp HHHHCCEE
T ss_pred HHHCCCCE
Confidence 654 3444
No 224
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=65.35 E-value=4.7 Score=32.94 Aligned_cols=63 Identities=16% Similarity=0.188 Sum_probs=51.5
Q ss_pred HHHhCCc-eecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHCCCeEc
Q 028948 78 RAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 78 l~~~~gV-~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~--~r~~lI~~~~~~Gf~v~ 147 (201)
+++++|| .+.. |-..++|+.+- .. .+.++||+++=++|.+-+.+.+ .....++++++.|.++.
T Consensus 148 ~L~~~gi~~l~i~G~~t~~CV~~T--a~-----~a~~~g~~v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~ 214 (216)
T 3v8e_A 148 YLEKHHTDEVYIVGVALEYXVKAT--AI-----SAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVV 214 (216)
T ss_dssp HHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHhCCCCEEEEEEeccccHHHHH--HH-----HHHHCCCEEEEeccccCCCCcccHHHHHHHHHHHHcCCEEe
Confidence 4577888 4443 77888888875 33 3567999999999999999999 99999999999998764
No 225
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=65.11 E-value=9.9 Score=32.79 Aligned_cols=67 Identities=13% Similarity=0.115 Sum_probs=42.9
Q ss_pred CceecC-c-cH--HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCC-------hhHHHHHHHHHHHCCCeEcccc
Q 028948 83 DVYVST-G-DW--AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP-------EETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 83 gV~v~~-G-tl--fE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~-------~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
|=+++. | .| .+.....+ .-.+++++.+|++||++|-++-..-.+. .+...++|+.+.++|+.|..++
T Consensus 64 G~~~~l~Gvn~~~~~~~~~~g-~~~~~di~~ik~~G~N~VRi~~~~~~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~ 141 (359)
T 4hty_A 64 GKTIVFRGVNISDPDKIDKDK-RFSKKHFEVIRSWGANVVRVPVHPRAWKERGVKGYLELLDQVVAWNNELGIYTILDW 141 (359)
T ss_dssp CCEECCEEEEECCHHHHHHTT-CCSHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEEEecCCcccCCCCC-CcCHHHHHHHHhcCCCEEEEeccHHHhhccCCHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 445555 5 22 33333344 2347889999999999999974322111 1112579999999999997654
No 226
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=64.93 E-value=9.2 Score=36.54 Aligned_cols=24 Identities=8% Similarity=0.101 Sum_probs=19.9
Q ss_pred hhHHHHHHHHHHHCCCeEcccccc
Q 028948 129 EETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 129 ~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
.++..++|+.++++|++|+-.+=.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~ 277 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVY 277 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEecc
Confidence 489999999999999999655433
No 227
>1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1
Probab=64.60 E-value=6.8 Score=38.39 Aligned_cols=48 Identities=15% Similarity=0.135 Sum_probs=35.5
Q ss_pred HHHHHHHcCCCEEEecCCccc---------------C-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 106 YVEDCKQVGFDTIELNVGSLE---------------I-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~---------------i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
-++++++|||++|++|-=+-. + +.++..++|+.++++|++|.-.+=..
T Consensus 22 ~LdYLk~LGVtaIwLsPi~~~~~gs~hGYdv~Dy~~Idp~lGt~edfk~LV~aaH~~GIkVIlDvV~N 89 (720)
T 1iv8_A 22 NLWYFXDLGVSHLYLSPVLMASPGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDIVPN 89 (720)
T ss_dssp THHHHHHHTCCEEEECCCEEECTTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHhCCCCEEEECCcccCCCCCCCCCCCccCCCcCccCCCHHHHHHHHHHHHHCCCEEEEEeccc
Confidence 356789999999999732211 1 26789999999999999995544333
No 228
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=64.41 E-value=11 Score=33.81 Aligned_cols=51 Identities=18% Similarity=0.276 Sum_probs=38.7
Q ss_pred chHHHHHHHHHHcCCCEEEec---CC----------------cccCC---------hhHHHHHHHHHHHCCCeEccccc
Q 028948 101 SAFKEYVEDCKQVGFDTIELN---VG----------------SLEIP---------EETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEIS---dG----------------ti~i~---------~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
..+++.++.++++|+++|.+- || ..+++ .+...++|+.|+++|++|...+-
T Consensus 43 ~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~ 121 (383)
T 3pzg_A 43 RMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLV 121 (383)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeccccccccccccccccccCCCcccccccccchHHHHHHHHHHHHHHHHCCCEEEEEcc
Confidence 478999999999999999873 33 22211 45566899999999999977653
No 229
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=64.37 E-value=9.6 Score=33.29 Aligned_cols=45 Identities=18% Similarity=0.353 Sum_probs=36.0
Q ss_pred chHHHHHHHH-----HHcCCCEEEecCCccc---------------CChhHHHHHHHHHHHCCCeE
Q 028948 101 SAFKEYVEDC-----KQVGFDTIELNVGSLE---------------IPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 101 ~~~~eyl~~~-----k~lGFd~IEISdGti~---------------i~~~~r~~lI~~~~~~Gf~v 146 (201)
+.+.++.+.+ +++|++.|-|.||=.. .|. ....+++.+++.|+++
T Consensus 26 ~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~-Gl~~l~~~ih~~Glk~ 90 (362)
T 1uas_A 26 QIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPS-GIKALADYVHAKGLKL 90 (362)
T ss_dssp HHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTT-CHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCc-cHHHHHHHHHHCCCEe
Confidence 4688888888 8899999999887544 333 3669999999999996
No 230
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=64.18 E-value=11 Score=32.31 Aligned_cols=46 Identities=15% Similarity=0.281 Sum_probs=39.6
Q ss_pred CCchHHHHHHHHHHcCCC-EEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 99 GPSAFKEYVEDCKQVGFD-TIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 99 g~~~~~eyl~~~k~lGFd-~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.|....+.+++|-+.|.. .|-++.|+ ++++..++.+.+++.|+++.
T Consensus 80 p~~~~~~~v~ea~~~Gi~~vVi~t~G~---~~~~~~~l~~~A~~~gi~vi 126 (297)
T 2yv2_A 80 PAPFAPDAVYEAVDAGIRLVVVITEGI---PVHDTMRFVNYARQKGATII 126 (297)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEECCCCC---CHHHHHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHHHHHcCCEEE
Confidence 356789999999999999 77788886 77788899999999999774
No 231
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=64.04 E-value=7.1 Score=34.80 Aligned_cols=134 Identities=14% Similarity=0.075 Sum_probs=83.9
Q ss_pred HHHHHHhhcccccEEEeeCccccccCh----------hHHHHHHHHHHhCC--ceecCccHHHHHHHhCCchHHHHHHHH
Q 028948 43 LEDIFESMGQFVDGLKFSGGSHSLMPK----------PFIEEVVKRAHQHD--VYVSTGDWAEHLIRNGPSAFKEYVEDC 110 (201)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs~l~p~----------~~L~eKI~l~~~~g--V~v~~GtlfE~al~qg~~~~~eyl~~~ 110 (201)
++..+++ =+|.+-+-..+|-++.+ +.+++-|+.++++| +.|... +|.+...+++.+-+.++.+
T Consensus 80 i~~a~~~---g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~--~ed~~~~~~~~~~~~~~~~ 154 (382)
T 2ztj_A 80 AKVAVET---GVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFS--AEDTFRSEEQDLLAVYEAV 154 (382)
T ss_dssp HHHHHHT---TCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE--ETTTTTSCHHHHHHHHHHH
T ss_pred HHHHHHc---CCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEE--EEeCCCCCHHHHHHHHHHH
Confidence 4444443 45666666666543332 45788899999999 876653 1233344556777888888
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEecccCcCe
Q 028948 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDK 180 (201)
Q Consensus 111 k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~ 180 (201)
.++ .+.|=|.|-.--+.+.+-.++|+.+++. +.+...+++-+-+ ..+.+|++ .|-.. =.|.
T Consensus 155 ~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~-~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~-----~vd~t--v~Gl 225 (382)
T 2ztj_A 155 APY-VDRVGLADTVGVATPRQVYALVREVRRV-VGPRVDIEFHGHNDTGCAIANAYEAIEAGAT-----HVDTT--ILGI 225 (382)
T ss_dssp GGG-CSEEEEEETTSCCCHHHHHHHHHHHHHH-HTTTSEEEEEEBCTTSCHHHHHHHHHHTTCC-----EEEEB--GGGC
T ss_pred HHh-cCEEEecCCCCCCCHHHHHHHHHHHHHh-cCCCCeEEEEeCCCccHHHHHHHHHHHhCCC-----EEEEc--cccc
Confidence 899 9999998888888888888999999885 1011223333221 34778888 44433 3333
Q ss_pred eccccCCcee
Q 028948 181 LFLASNPEIE 190 (201)
Q Consensus 181 v~~~~~~~~~ 190 (201)
=+-+.|+.+|
T Consensus 226 GeraGN~~lE 235 (382)
T 2ztj_A 226 GERNGITPLG 235 (382)
T ss_dssp SSTTCBCBHH
T ss_pred cccccchhHH
Confidence 3467888876
No 232
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=63.86 E-value=8 Score=33.95 Aligned_cols=131 Identities=11% Similarity=0.008 Sum_probs=83.6
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCc-cHHHHHHHhCCchHHHHHHHHH--HcCCCEE
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCK--QVGFDTI 118 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G-tlfE~al~qg~~~~~eyl~~~k--~lGFd~I 118 (201)
.+++++.....-||.+-+.+ .+..-+...+-++.++++|+.|... -.+ .+....+.|++.++ +.|.+.|
T Consensus 89 dv~~~~~a~~~Gvd~~ri~~---~~~nle~~~~~v~~ak~~G~~v~~~~~~~-----~~~~~~~~~l~~~~~~~~G~~~i 160 (320)
T 3dxi_A 89 DLNHLLLPIIGLVDMIRIAI---DPQNIDRAIVLAKAIKTMGFEVGFNVMYM-----SKWAEMNGFLSKLKAIDKIADLF 160 (320)
T ss_dssp GHHHHHGGGTTTCSEEEEEE---CGGGHHHHHHHHHHHHTTTCEEEEEECCT-----TTGGGSTTSGGGGGGGTTTCSEE
T ss_pred hHHHHHHhhhcCCCEEEEEe---cHHHHHHHHHHHHHHHHCCCEEEEEEEeC-----CCCCCHHHHHHHHHHhhCCCCEE
Confidence 56777666668899987775 2222345677778899999876542 111 11001113444443 4699999
Q ss_pred EecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEecccCcCeeccccCCc
Q 028948 119 ELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVARAPRSTDKLFLASNPE 188 (201)
Q Consensus 119 EISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~~ 188 (201)
-|.|-.--+.+++-.++|+.+++. +. ..++.-+-+ ..+++|++ . +++-=+|.=+-+.||+
T Consensus 161 ~l~Dt~G~~~P~~~~~lv~~l~~~-~~--~~i~~H~Hn~~G~a~an~laA~~aGa~-----~--vd~si~GlG~~~GN~~ 230 (320)
T 3dxi_A 161 CMVDSFGGITPKEVKNLLKEVRKY-TH--VPVGFHGHDNLQLGLINSITAIDDGID-----F--IDATITGMGRGAGNLK 230 (320)
T ss_dssp EEECTTSCCCHHHHHHHHHHHHHH-CC--SCEEEECBCTTSCHHHHHHHHHHTTCS-----E--EEEBGGGCSSTTCBCB
T ss_pred EECcccCCCCHHHHHHHHHHHHHh-CC--CeEEEEeCCCCccHHHHHHHHHHhCCC-----E--EEEeccccCCcccchh
Confidence 999999888999999999999887 32 233433221 34677887 3 3444455445588998
Q ss_pred ee
Q 028948 189 IE 190 (201)
Q Consensus 189 ~~ 190 (201)
+|
T Consensus 231 ~E 232 (320)
T 3dxi_A 231 ME 232 (320)
T ss_dssp HH
T ss_pred HH
Confidence 87
No 233
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=63.59 E-value=4.5 Score=35.65 Aligned_cols=71 Identities=14% Similarity=0.101 Sum_probs=42.2
Q ss_pred hHHHHHHHHHHhC-------CceecCccHHHHH-HHhCCchHHHHHHHHHHcCCCEEEecCCccc----C--ChhHHHHH
Q 028948 70 PFIEEVVKRAHQH-------DVYVSTGDWAEHL-IRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----I--PEETLLRY 135 (201)
Q Consensus 70 ~~L~eKI~l~~~~-------gV~v~~GtlfE~a-l~qg~~~~~eyl~~~k~lGFd~IEISdGti~----i--~~~~r~~l 135 (201)
.++.|.|+-.++. +|++++..|.+-- +... ...++.+.+.+.|+|+|+||+|+.. + ++.....+
T Consensus 209 r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G~~~~~--~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~ 286 (363)
T 3l5l_A 209 RFLLETLAAVREVWPENLPLTARFGVLEYDGRDEQTLE--ESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPI 286 (363)
T ss_dssp HHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCHHHHHH--HHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHH
T ss_pred HHHHHHHHHHHHHcCCCceEEEEecchhcCCCCCCCHH--HHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHH
Confidence 3567777777754 3455654343221 2222 5667788888999999999998642 1 22233455
Q ss_pred HHHHHHC
Q 028948 136 VRLVKSA 142 (201)
Q Consensus 136 I~~~~~~ 142 (201)
++.+++.
T Consensus 287 ~~~ir~~ 293 (363)
T 3l5l_A 287 AERVRRE 293 (363)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6555553
No 234
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=63.38 E-value=10 Score=36.82 Aligned_cols=57 Identities=21% Similarity=0.417 Sum_probs=43.3
Q ss_pred cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-------------CChh----HHHHHHHHHHHCCCeE
Q 028948 90 DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-------------IPEE----TLLRYVRLVKSAGLKA 146 (201)
Q Consensus 90 tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~-------------i~~~----~r~~lI~~~~~~Gf~v 146 (201)
+|--.....+.+.+.++++.++++|++.|-|.||-.. .+++ ....+++.+++.||++
T Consensus 339 sW~~~~~~~~ee~v~~~ad~~~~~G~~~~viDDGW~~~r~~~~~~~Gd~~~d~~kFP~Glk~lv~~ih~~Glk~ 412 (732)
T 2xn2_A 339 NWEATYFDFNEDKLKTIVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKKFPNGLGHFADYVHEQGLKF 412 (732)
T ss_dssp CHHHHTTCCCHHHHHHHHHHHHHTTCCEEEECSSSBTTCSSTTSCTTCCSBCTTTCTTCHHHHHHHHHHTTCEE
T ss_pred chhhhccCCCHHHHHHHHHHHHHcCCcEEEEcCcccccCCCCccccCceeeCchhcCccHHHHHHHHHHcCCEE
Confidence 6764433334458999999999999999999988642 1111 3679999999999998
No 235
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=63.29 E-value=9.1 Score=36.26 Aligned_cols=52 Identities=12% Similarity=0.156 Sum_probs=38.7
Q ss_pred HHHHHHHHHHcCCCEEEecCCccc----------------C-----ChhHHHHHHHHHHHCCCeEcccccccc
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLE----------------I-----PEETLLRYVRLVKSAGLKAKPKFAVMF 154 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~----------------i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~ 154 (201)
+.+-+++++++||++|.|+-=+-. + +.++..++|+.++++|++|.-.+=...
T Consensus 113 l~~~LdyL~~lGv~~v~l~P~~~~~~~~~~~GY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~V~NH 185 (655)
T 3ucq_A 113 VEERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRPDLGTMDDLSALARALRGRGISLVLDLVLNH 185 (655)
T ss_dssp HHTTHHHHHHTTCCEEEECCCEEECSSCCGGGTSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSE
T ss_pred HHHhhHHHHHcCCCEEEECCCcCCCCCCCCCCcCCcCcCccCccCCCHHHHHHHHHHHHHCCCEEEEEeeccc
Confidence 445577889999999999833211 1 257899999999999999966554443
No 236
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=63.20 E-value=42 Score=28.05 Aligned_cols=77 Identities=16% Similarity=0.147 Sum_probs=43.8
Q ss_pred cChhHHHHHHHHHHhCCceecC---ccHHHHHHHhCCchHHHHHHHHHHcCCC-EEEecCCcc--cCChhHHHHHHHHHH
Q 028948 67 MPKPFIEEVVKRAHQHDVYVST---GDWAEHLIRNGPSAFKEYVEDCKQVGFD-TIELNVGSL--EIPEETLLRYVRLVK 140 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV~v~~---GtlfE~al~qg~~~~~eyl~~~k~lGFd-~IEISdGti--~i~~~~r~~lI~~~~ 140 (201)
.+.+.+++.+++++++|+++.. ++.-|.. . .++++++.+++.|++ .+-++-++. +-+.+...+.+++++
T Consensus 195 ~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~--~---~~~~~~~~~~~~g~~~~~~i~H~~~~~~~~~~~~~~~~~~l~ 269 (403)
T 2qt3_A 195 NVEGSLDLCFKLAKEYDVDIDYHIHDIGTVGV--Y---SINRLAQKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYK 269 (403)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEEEECCCHHHHH--H---HHHHHHHHHHHTTCTTSEEEEECTHHHHSCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHcCCCeEEEeCCcccchh--H---HHHHHHHHHHHcCCCCCeEEEehhhhccCChhhHHHHHHHHH
Confidence 3446788889999999987764 3433321 1 456667777788861 122222211 011122236777788
Q ss_pred HCCCeEcc
Q 028948 141 SAGLKAKP 148 (201)
Q Consensus 141 ~~Gf~v~p 148 (201)
+.|..+.+
T Consensus 270 ~~g~~v~~ 277 (403)
T 2qt3_A 270 DSGMKFVT 277 (403)
T ss_dssp HHTCEEEE
T ss_pred HcCCEEEE
Confidence 88877644
No 237
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=63.11 E-value=23 Score=30.94 Aligned_cols=126 Identities=16% Similarity=0.221 Sum_probs=84.0
Q ss_pred ccccccccCCCCCCCCCCCCCCCceeEecCCCCCCcchhHHHHHHHhhccccc----------EEEeeCcccc-------
Q 028948 3 GYYYGWKSFDEYEDRAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVD----------GLKFSGGSHS------- 65 (201)
Q Consensus 3 ~~~~~~~~f~~~~~R~~KPR~~GlTmV~DkG~s~~~g~~~l~DlLe~ag~yID----------~lKfg~GTs~------- 65 (201)
|=..||+....+ .+..+|.+.-++ ++|..+.+.+|...-.+|. ++|++.|-.+
T Consensus 97 GDP~Q~~~Va~I-A~~~~P~HVNQV---------Ftgag~trg~L~~~~T~VNaLVSPTG~~G~VkISTGp~Sas~~~~~ 166 (275)
T 3m6y_A 97 GDNRQAAVVAEI-AKHYPGSHINQV---------FPSVGATRANLGEKDSWINSLVSPTGKVGYVNISTGPISAAGEEKA 166 (275)
T ss_dssp TCGGGHHHHHHH-TTTCCCSEECCB---------GGGHHHHHHHHTTCCCEEEEEEBCCSSTTEEECCCSTTGGGSSSCC
T ss_pred CCHHHHHHHHHH-HHhcCCCccccc---------ccchHHHHhhcCCCccEEEEEEcCCCCcceEEeccCCCccccCCCc
Confidence 345677765443 344555543321 3477788888875555554 6899999433
Q ss_pred ccChhHHHHHHHHHHhCCc---eecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHH
Q 028948 66 LMPKPFIEEVVKRAHQHDV---YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKS 141 (201)
Q Consensus 66 l~p~~~L~eKI~l~~~~gV---~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~ 141 (201)
..| ++.-|+|+++-|+ ++|| ||+--. +.+...-+.|.+-|| ++|=.-| |+.+-..++++-+.+
T Consensus 167 ~V~---vetAiaml~dmG~~SvKffPM~Gl~~l------eEl~avAkAca~~g~-~lEPTGG---Idl~Nf~~I~~i~l~ 233 (275)
T 3m6y_A 167 IVP---IKTAIALVRDMGGNSLKYFPMKGLAHE------EEYRAVAKACAEEGF-ALEPTGG---IDKENFETIVRIALE 233 (275)
T ss_dssp EEE---HHHHHHHHHHHTCCEEEECCCTTTTTH------HHHHHHHHHHHHHTC-EEEEBSS---CCTTTHHHHHHHHHH
T ss_pred eee---HHHHHHHHHHcCCCeeeEeecCCcccH------HHHHHHHHHHHHcCc-eECCCCC---ccHhHHHHHHHHHHH
Confidence 333 7888999999886 8888 653100 133444578999999 9998655 667777889999999
Q ss_pred CCCe-Eccccc
Q 028948 142 AGLK-AKPKFA 151 (201)
Q Consensus 142 ~Gf~-v~pE~g 151 (201)
.|.+ |.|.+=
T Consensus 234 aGv~~viPHIY 244 (275)
T 3m6y_A 234 ANVEQVIPHVY 244 (275)
T ss_dssp TTCSCBCCEEC
T ss_pred cCCCeeccccc
Confidence 9986 566553
No 238
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=62.87 E-value=9 Score=32.84 Aligned_cols=62 Identities=18% Similarity=0.222 Sum_probs=46.5
Q ss_pred CCceecCccHHHHHHH---------hCCchHHHHHHHHHHcCCC-EEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 82 HDVYVSTGDWAEHLIR---------NGPSAFKEYVEDCKQVGFD-TIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 82 ~gV~v~~GtlfE~al~---------qg~~~~~eyl~~~k~lGFd-~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
+|+++|+ ++-|..-. -.|....+.+++|-+.|.. .|.++.|+ ++++..++++.+++.|+++.
T Consensus 54 ~G~~vy~-sl~el~~~~~~Dv~ii~vp~~~~~~~v~ea~~~Gi~~vVi~t~G~---~~~~~~~l~~~A~~~gi~vi 125 (294)
T 2yv1_A 54 HGVPVFD-TVKEAVKETDANASVIFVPAPFAKDAVFEAIDAGIELIVVITEHI---PVHDTMEFVNYAEDVGVKII 125 (294)
T ss_dssp TTEEEES-SHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCSCC---CHHHHHHHHHHHHHHTCEEE
T ss_pred CCEeeeC-CHHHHhhcCCCCEEEEccCHHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHHHHHcCCEEE
Confidence 5777776 33332211 1335688999999999999 78888886 67788899999999999874
No 239
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics, unknown function, hydrolase, PSI-2, protein structure initiative; 1.50A {Streptomyces coelicolor}
Probab=62.62 E-value=19 Score=31.07 Aligned_cols=72 Identities=10% Similarity=0.124 Sum_probs=48.4
Q ss_pred ChhHHHHHHHHHHhCCceecC--ccHHH------HHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHH
Q 028948 68 PKPFIEEVVKRAHQHDVYVST--GDWAE------HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLV 139 (201)
Q Consensus 68 p~~~L~eKI~l~~~~gV~v~~--GtlfE------~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~ 139 (201)
....+.+.|..+|+.|++|.. |||-- ..-++. -++..++.+++.|||.|.|.=-. ..+.+...++++.+
T Consensus 60 ~~~~~~~~i~~~~~~g~kvllsiGG~~~s~~~~~~~~r~~--f~~~~~~~~~~~~~DGiDiD~E~-p~~~~~~~~~l~~l 136 (302)
T 3ebv_A 60 TVDQFKADVRAKQAAGKKVIISVGGEKGTVSVNSSASATN--FANSVYSVMREYGFDGVDIDLEN-GLNPTYMTQALRAL 136 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEETTCCCCCCSHHHHHH--HHHHHHHHHHHHTCCEEEEEECS-CCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCEEEEEEECCCCCcccCCHHHHHH--HHHHHHHHHHHhCCCeEEEeccc-ccCHHHHHHHHHHH
Confidence 346689999999999998876 77631 111221 35667788899999999986332 22345566777777
Q ss_pred HHC
Q 028948 140 KSA 142 (201)
Q Consensus 140 ~~~ 142 (201)
++.
T Consensus 137 ~~~ 139 (302)
T 3ebv_A 137 SAK 139 (302)
T ss_dssp HHH
T ss_pred HHh
Confidence 654
No 240
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A {Aspergillus fumigatus}
Probab=62.33 E-value=24 Score=29.78 Aligned_cols=70 Identities=14% Similarity=0.147 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCceecC--ccH----HHHHHHhCCc----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 028948 71 FIEEVVKRAHQHDVYVST--GDW----AEHLIRNGPS----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (201)
Q Consensus 71 ~L~eKI~l~~~~gV~v~~--Gtl----fE~al~qg~~----~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~ 140 (201)
.+.+.|..+|+.|++|.. ||| |..+. ..+. -++...+.+++.|||.|.|.=-.- -+.+...++++.++
T Consensus 73 ~~~~~i~~~k~~g~kvllSiGG~~~~~fs~~~-~~~~~r~~f~~s~~~~~~~~~~DGiDiDwE~p-~~~~~~~~ll~~Lr 150 (290)
T 2y8v_A 73 PLWAEVPVLKRSGVKVMGMLGGAAQGSYRCLD-GDQEKFERYYQPLLAMVRRHQLDGLDLDVEEE-MSLPGIIRLIDRLK 150 (290)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECSSTTTTGGGS-SCHHHHHHHHHHHHHHHHHHTCSEEEEECCSC-BCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCchhcc-CCHHHHHHHHHHHHHHHHHhCCCeEEEccccc-chHHHHHHHHHHHH
Confidence 478899999999998876 777 22111 1111 356777888999999999974332 23467777777777
Q ss_pred HC
Q 028948 141 SA 142 (201)
Q Consensus 141 ~~ 142 (201)
+.
T Consensus 151 ~~ 152 (290)
T 2y8v_A 151 LD 152 (290)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 241
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=61.66 E-value=19 Score=29.77 Aligned_cols=136 Identities=14% Similarity=0.146 Sum_probs=81.8
Q ss_pred Cc-eeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCccccccC-hhHHHHHHHHHHhCCc--ee--cCc--cHHHHHH
Q 028948 25 GV-TEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMP-KPFIEEVVKRAHQHDV--YV--STG--DWAEHLI 96 (201)
Q Consensus 25 Gl-TmV~DkG~s~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p-~~~L~eKI~l~~~~gV--~v--~~G--tlfE~al 96 (201)
|. ..+.|=-+ .--++..+.+.+.+.++ |++=. ++... .+.++.-++.++++|. .+ +.. ++.+
T Consensus 52 ~~~~VflDlK~--~DI~nTv~~~~~~~~~~-d~vTV----h~~~G~~~~~~~a~~~~~~~~~~v~vLts~s~~~~~~--- 121 (222)
T 4dbe_A 52 DVEEIIVDFKL--ADIGYIMKSIVERLSFA-NSFIA----HSFIGVKGSLDELKRYLDANSKNLYLVAVMSHEGWST--- 121 (222)
T ss_dssp CCSEEEEEEEE--CSCHHHHHHHHTTCTTC-SEEEE----ESTTCTTTTHHHHHHHHHHTTCEEEEEEECSSTTCCC---
T ss_pred CCCeEEEEeee--cchHHHHHHHHHHHHhC-CEEEE----EcCcCcHHHHHHHHHHHHhcCCcEEEEEeCCCcchHH---
Confidence 44 55555443 11345666677777777 77755 33555 6678888888887753 32 221 2322
Q ss_pred HhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccc--cCCCCcccccccccccEEEec
Q 028948 97 RNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVM--FNKSDIPSDRDRAFGAYVARA 174 (201)
Q Consensus 97 ~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k--~~~~dl~ag~~~a~g~~Vi~E 174 (201)
....++.+.+++.|.+.+-+|. .+.+..+.||.....-+.+.|=+|.+ .+.+.+.+|+| |+|+
T Consensus 122 ----~~~~~~a~~a~~~g~~GvV~sa-----t~p~e~~~ir~~~~~~~~vtPGI~~~g~tp~~a~~~Gad-----~iVV- 186 (222)
T 4dbe_A 122 ----LFADYIKNVIREISPKGIVVGG-----TKLDHITQYRRDFEKMTIVSPGMGSQGGSYGDAVCAGAD-----YEII- 186 (222)
T ss_dssp ----TTHHHHHHHHHHHCCSEEEECT-----TCHHHHHHHHHHCTTCEEEECCBSTTSBCTTHHHHHTCS-----EEEE-
T ss_pred ----HHHHHHHHHHHHhCCCEEEECC-----CCHHHHHHHHHhCCCCEEEcCCcccCccCHHHHHHcCCC-----EEEE-
Confidence 1237788899999999887664 12244566776655534478977766 23445667777 7654
Q ss_pred ccCcCeeccccCCc
Q 028948 175 PRSTDKLFLASNPE 188 (201)
Q Consensus 175 ~Res~~v~~~~~~~ 188 (201)
+|. +.-++||.
T Consensus 187 GR~---I~~A~dP~ 197 (222)
T 4dbe_A 187 GRS---IYNAGNPL 197 (222)
T ss_dssp CHH---HHTSSSHH
T ss_pred CHH---hcCCCCHH
Confidence 554 23456663
No 242
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=61.49 E-value=8.6 Score=30.62 Aligned_cols=19 Identities=16% Similarity=0.251 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHcCCCEEEec
Q 028948 102 AFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEIS 121 (201)
.+++.++.++++||+ ||+.
T Consensus 11 ~l~~~l~~~~~~G~~-vEl~ 29 (254)
T 3ayv_A 11 RAEEALPRLQALGLG-AEVY 29 (254)
T ss_dssp GHHHHHHHHHHHTCE-EEEE
T ss_pred HHHHHHHHHHhcCCC-EEEe
Confidence 455556666666666 6664
No 243
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=61.44 E-value=8.1 Score=36.29 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=32.3
Q ss_pred chHHHHHHHHHHcCCCEEEecC----------CcccCChhHHHHHHHHHHHCCCeEccc
Q 028948 101 SAFKEYVEDCKQVGFDTIELNV----------GSLEIPEETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISd----------Gti~i~~~~r~~lI~~~~~~Gf~v~pE 149 (201)
+..++=++.+|++||++|-++. |.. +.+...++|+.++++|++|...
T Consensus 14 ~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~--d~~~ld~~ld~a~~~Gi~vil~ 70 (645)
T 1kwg_A 14 ERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRL--EWGWLDEAIATLAAEGLKVVLG 70 (645)
T ss_dssp HHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBC--CCHHHHHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeeechhhcCCCCCcc--ChHHHHHHHHHHHHCCCEEEEe
Confidence 3566667788888888888763 222 2344567888888888888643
No 244
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=61.19 E-value=41 Score=28.17 Aligned_cols=89 Identities=10% Similarity=0.024 Sum_probs=56.8
Q ss_pred ChhHHHHHHHHHHhC-Cceec----CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc-----ccCCh--------
Q 028948 68 PKPFIEEVVKRAHQH-DVYVS----TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS-----LEIPE-------- 129 (201)
Q Consensus 68 p~~~L~eKI~l~~~~-gV~v~----~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGt-----i~i~~-------- 129 (201)
+.+.+.+.++-.++. ++++. ++ | ....+.++.+.+.+.|.|.|-+++.+ ++...
T Consensus 142 ~~e~~~~iv~~vr~~~~~Pv~vKi~~~-~-------~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~ 213 (311)
T 1jub_A 142 DFEATEKLLKEVFTFFTKPLGVKLPPY-F-------DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPK 213 (311)
T ss_dssp CHHHHHHHHHHHTTTCCSCEEEEECCC-C-------SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGG
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCC-C-------CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccC
Confidence 556678888888776 55443 33 2 11256778889999999999999986 33211
Q ss_pred ------------hHHHHHHHHHHHC---CCeEccccccccCC---CCcccccc
Q 028948 130 ------------ETLLRYVRLVKSA---GLKAKPKFAVMFNK---SDIPSDRD 164 (201)
Q Consensus 130 ------------~~r~~lI~~~~~~---Gf~v~pE~g~k~~~---~dl~ag~~ 164 (201)
..-.++|+++++. .+.|..-=|+.... +-+.+|++
T Consensus 214 ~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~~~da~~~l~~GAd 266 (311)
T 1jub_A 214 DGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGAT 266 (311)
T ss_dssp GGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCS
T ss_pred CCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 1225788888775 45666666665443 22556776
No 245
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=61.04 E-value=31 Score=29.82 Aligned_cols=104 Identities=16% Similarity=0.200 Sum_probs=71.2
Q ss_pred cchhHHHHHHHhhccccc----------EEEeeCcccc-ccChh--HHHHHHHHHHhCCc---eecC-ccHHHHHHHhCC
Q 028948 38 SSHNVLEDIFESMGQFVD----------GLKFSGGSHS-LMPKP--FIEEVVKRAHQHDV---YVST-GDWAEHLIRNGP 100 (201)
Q Consensus 38 ~g~~~l~DlLe~ag~yID----------~lKfg~GTs~-l~p~~--~L~eKI~l~~~~gV---~v~~-GtlfE~al~qg~ 100 (201)
+|..+.+.+|...-.+|. ++|++.|-.+ -.+.. -++.-|+|+++-|+ ++|| ||+--.
T Consensus 100 tgag~t~~~L~~~~T~VNaLvsPTG~~G~VkIsTGp~Ss~~~~~~V~vetAiaml~dmG~~SvKffPm~Gl~~l------ 173 (249)
T 3m0z_A 100 TGVATSRALLGQNETVVNGLVSPTGTPGMVKISTGPLSSGAADGIVPLETAIALLKDMGGSSIKYFPMGGLKHR------ 173 (249)
T ss_dssp GGHHHHHHHHTSSCSEEEEEEBCCSSTTEEECCCSTTGGGSSCCEEEHHHHHHHHHHTTCCEEEECCCTTTTTH------
T ss_pred cchHHHHHhccCCCeEEEEEEcCCCccceEEeccCccccCCCCceeeHHHHHHHHHHcCCCeeeEeecCCcccH------
Confidence 466677778876555554 6799999322 22211 27888999999887 8888 653100
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCe-Eccccc
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKFA 151 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~-v~pE~g 151 (201)
+.+...-+.|.+-|| ++|=.-| |+.+-..++++-+.+.|.+ +.|.+=
T Consensus 174 ~E~~avAka~a~~g~-~lEPTGG---Idl~N~~~I~~i~l~aGv~~viPHIY 221 (249)
T 3m0z_A 174 AEFEAVAKACAAHDF-WLEPTGG---IDLENYSEILKIALDAGVSKIIPHIY 221 (249)
T ss_dssp HHHHHHHHHHHHTTC-EEEEBSS---CCTTTHHHHHHHHHHHTCSCBCCBCC
T ss_pred HHHHHHHHHHHHcCc-eECCCCC---ccHhhHHHHHHHHHHcCCCeeccccc
Confidence 133444578999999 9998655 6667778899999999876 566553
No 246
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=60.66 E-value=24 Score=28.97 Aligned_cols=104 Identities=13% Similarity=0.195 Sum_probs=57.7
Q ss_pred HHHHHHHhhccc-ccEEEeeCccc-cc-cChhHHHHHHHHHHhCCceecC-c---cHHHHHHHhCC------chHHHHHH
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSH-SL-MPKPFIEEVVKRAHQHDVYVST-G---DWAEHLIRNGP------SAFKEYVE 108 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs-~l-~p~~~L~eKI~l~~~~gV~v~~-G---tlfE~al~qg~------~~~~eyl~ 108 (201)
.+++.++.+.+. .|.+=+.+... .+ .....+++.-++++++|+.+.. . .|. ..++ ..+++.++
T Consensus 37 ~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~----~~~~~~~~~~~~~~~~i~ 112 (296)
T 2g0w_A 37 SFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWG----TAEDRTAEQQKKEQTTFH 112 (296)
T ss_dssp CHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEECBCCCS----STTTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehhhhccc----cCChHHHHHHHHHHHHHH
Confidence 345555544332 66776654321 00 0223478888899999997764 1 220 0111 26789999
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHH--CCCeEcccc
Q 028948 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKS--AGLKAKPKF 150 (201)
Q Consensus 109 ~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~--~Gf~v~pE~ 150 (201)
.|++||.+.|-+..+ -..+.+.-.+.++.+.+ .|+++-.|-
T Consensus 113 ~A~~lGa~~v~~g~~-~~~~~~~~~~~l~~l~~~a~Gv~l~lE~ 155 (296)
T 2g0w_A 113 MARLFGVKHINCGLL-EKIPEEQIIVALGELCDRAEELIIGLEF 155 (296)
T ss_dssp HHHHHTCCEEEECCC-SCCCHHHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHcCCCEEEEcCC-CCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 999999999987433 12332222222222222 688875553
No 247
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=60.59 E-value=8.3 Score=39.28 Aligned_cols=50 Identities=20% Similarity=0.382 Sum_probs=40.3
Q ss_pred CchHHHHHHHHHHcCCCEEEe---------cCCcccCC-hhHHHHHHHHHHHCCCeEccc
Q 028948 100 PSAFKEYVEDCKQVGFDTIEL---------NVGSLEIP-EETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEI---------SdGti~i~-~~~r~~lI~~~~~~Gf~v~pE 149 (201)
|+..++-++.+|++||++|++ ..|..+.+ ..+..++|+.|+++||.|+--
T Consensus 55 pe~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL~~fl~la~e~GL~VILR 114 (1003)
T 3og2_A 55 PSLYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSLEPFFEAATKAGIYLLAR 114 (1003)
T ss_dssp GGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEecchhhcCCCCCEecccchhhHHHHHHHHHHcCCEEEec
Confidence 357888899999999999986 56766766 346779999999999999653
No 248
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=60.52 E-value=11 Score=36.09 Aligned_cols=47 Identities=17% Similarity=0.222 Sum_probs=34.7
Q ss_pred HHHHHHcCCCEEEecCCc--------c-----cC-----ChhHHHHHHHHHHHCCCeEccccccc
Q 028948 107 VEDCKQVGFDTIELNVGS--------L-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGt--------i-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
|+++++|||++|.+|-=+ - .+ +.++..++|+.++++|++|...+=..
T Consensus 66 l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~V~N 130 (669)
T 3k8k_A 66 LDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDYVMN 130 (669)
T ss_dssp HHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEECcc
Confidence 667788999999987321 1 11 36889999999999999995554433
No 249
>1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3
Probab=60.00 E-value=14 Score=33.48 Aligned_cols=43 Identities=7% Similarity=0.228 Sum_probs=24.6
Q ss_pred HHHHHHHHHhCCc---ee--cCcc-HHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 028948 72 IEEVVKRAHQHDV---YV--STGD-WAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 72 L~eKI~l~~~~gV---~v--~~Gt-lfE~al~qg~~~~~eyl~~~k~lGFd~I 118 (201)
.++-++..+++|+ ++ +.|+ |-+. .. +.+++.+++|++.|+-+|
T Consensus 41 ~~~di~~ik~~G~N~VRipv~~g~~~~~~-~l---~~ld~vv~~a~~~Gl~VI 89 (464)
T 1wky_A 41 ATTAIEGIANTGANTVRIVLSDGGQWTKD-DI---QTVRNLISLAEDNNLVAV 89 (464)
T ss_dssp HHHHHHHHHTTTCSEEEEEECCSSSSCCC-CH---HHHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHCCCCEEEEEcCCCCccCHH-HH---HHHHHHHHHHHHCCCEEE
Confidence 5566777777775 22 2232 3221 11 257778888888887766
No 250
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=59.84 E-value=47 Score=28.39 Aligned_cols=85 Identities=9% Similarity=0.069 Sum_probs=57.6
Q ss_pred hHHHHHHHhhccc-ccEEEeeCccccccCh------------hHHHHHHHHHHhCCceecC-ccHH-------HHHHHhC
Q 028948 41 NVLEDIFESMGQF-VDGLKFSGGSHSLMPK------------PFIEEVVKRAHQHDVYVST-GDWA-------EHLIRNG 99 (201)
Q Consensus 41 ~~l~DlLe~ag~y-ID~lKfg~GTs~l~p~------------~~L~eKI~l~~~~gV~v~~-Gtlf-------E~al~qg 99 (201)
+.+.++|+-+.++ |+++-++--+..++.. +.+++--++++++|+.++. ..++ +-.....
T Consensus 61 ~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~~~~~~~~~~~~~~~gi~i~~H~py~iNL~S~~~e~re~S 140 (301)
T 2j6v_A 61 RDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQRLSMHPGQYVNPGSPDPEVVERS 140 (301)
T ss_dssp HHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHHHHHHHHHHHHHHHTTCEEEECCCTTCCTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCCHHHHHHHHHHHHHcCCeEEEeCchhhcCCCCCHHHHHHH
Confidence 4556666665444 9999998777666643 4577778899999997765 3333 1222221
Q ss_pred CchHHHHHHHHHHcCCC--EEEecCCcc
Q 028948 100 PSAFKEYVEDCKQVGFD--TIELNVGSL 125 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd--~IEISdGti 125 (201)
-+.+.+-++.|..+|.+ .+=+--|+.
T Consensus 141 i~~l~~~l~~a~~lG~~~a~~v~HpG~~ 168 (301)
T 2j6v_A 141 LAELRYSARLLSLLGAEDGVLVLHLGGA 168 (301)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHcCCCCCEEEECCCcC
Confidence 12677888999999976 777878863
No 251
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=59.73 E-value=9.3 Score=30.77 Aligned_cols=91 Identities=10% Similarity=0.105 Sum_probs=60.2
Q ss_pred ccEEEeeCccccccChhHHHHHHHHHHhCCceecCc---cHHHHHHHhCC-chHHHHHHHHHHcCCCEEEecCCcccCCh
Q 028948 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG---DWAEHLIRNGP-SAFKEYVEDCKQVGFDTIELNVGSLEIPE 129 (201)
Q Consensus 54 ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G---tlfE~al~qg~-~~~~eyl~~~k~lGFd~IEISdGti~i~~ 129 (201)
.|.+=+... .+.+.+.+++.-++++++|+.++.- .++.. ...- +.+++.++.|++||...|-+..|...-.
T Consensus 37 ~~~vEl~~~--~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~--~~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~- 111 (264)
T 1yx1_A 37 AQRVELREE--LFAGPPDTEALTAAIQLQGLECVFSSPLELWRE--DGQLNPELEPTLRRAEACGAGWLKVSLGLLPEQ- 111 (264)
T ss_dssp CSEEEEEGG--GCSSCCCHHHHHHHHHHTTCEEEEEEEEEEECT--TSSBCTTHHHHHHHHHHTTCSEEEEEEECCCSS-
T ss_pred CCEEEEEHH--hcCCCHHHHHHHHHHHHcCCEEEEecchhhcCC--chhHHHHHHHHHHHHHHcCCCEEEEecCCCCcH-
Confidence 566666432 1211115888888999999976531 22110 0011 4799999999999999999887765432
Q ss_pred hHHHHHHHHHHHCCCeEccc
Q 028948 130 ETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 130 ~~r~~lI~~~~~~Gf~v~pE 149 (201)
+...++.+.+++.|+++..|
T Consensus 112 ~~l~~l~~~a~~~Gv~l~lE 131 (264)
T 1yx1_A 112 PDLAALGRRLARHGLQLLVE 131 (264)
T ss_dssp CCHHHHHHHHTTSSCEEEEE
T ss_pred HHHHHHHHHHHhcCCEEEEe
Confidence 25667888889999888555
No 252
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=59.62 E-value=6.4 Score=32.63 Aligned_cols=64 Identities=17% Similarity=0.135 Sum_probs=51.1
Q ss_pred HHHhCCc-eecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 78 RAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 78 l~~~~gV-~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
+++++|| .+.. |-..++|+.+- .. .+.++||+++=++|.+-+.+.+.....++.+++.|-.|.+
T Consensus 151 ~L~~~gi~~lvv~G~~T~~CV~~T--a~-----dA~~~Gy~V~Vv~Da~as~~~~~h~~aL~~m~~~g~~v~~ 216 (227)
T 3r2j_A 151 LLHSIGARRVFVCGVAYDFCVFFT--AM-----DARKNGFSVVLLEDLTAAVDDAAWSARTAELKDAGVVLLK 216 (227)
T ss_dssp HHHHHTCCEEEEEESCTTTHHHHH--HH-----HHHHTTCEEEEEEEEECCSCGGGHHHHHHHHHTTTCEEEC
T ss_pred HHHHcCCCEEEEEEeccchHHHHH--HH-----HHHHCCCEEEEEhHhhCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4456688 4444 77888888875 33 3567999999999999999999999999999999888744
No 253
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=59.50 E-value=16 Score=31.44 Aligned_cols=49 Identities=16% Similarity=0.184 Sum_probs=36.6
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCccc---------CC---hhHHHHHHHHHHHCCCeEcc
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGSLE---------IP---EETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGti~---------i~---~~~r~~lI~~~~~~Gf~v~p 148 (201)
|.-.++.++.++++||++|-|+-+--. +. .+...++|+.++++|++|..
T Consensus 41 p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vil 101 (345)
T 3ndz_A 41 PMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVII 101 (345)
T ss_dssp CCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 445688999999999999999755332 22 24456789999999999944
No 254
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=59.46 E-value=12 Score=32.78 Aligned_cols=50 Identities=16% Similarity=0.100 Sum_probs=35.5
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcc---------cCC---hhHHHHHHHHHHHCCCeEcc
Q 028948 99 GPSAFKEYVEDCKQVGFDTIELNVGSL---------EIP---EETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 99 g~~~~~eyl~~~k~lGFd~IEISdGti---------~i~---~~~r~~lI~~~~~~Gf~v~p 148 (201)
+|+..++..+.++++||++|-|+-+-- .+. .+...++|+.++++|++|+.
T Consensus 41 ~~~~t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIl 102 (340)
T 3qr3_A 41 YPDGIGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIV 102 (340)
T ss_dssp SCCHHHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCccHHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 466778888888999999988875422 122 23345778889999999843
No 255
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=59.40 E-value=41 Score=26.62 Aligned_cols=109 Identities=10% Similarity=0.054 Sum_probs=65.7
Q ss_pred HHHHHHHhhccc-ccEEEeeCcccc-ccChhHHHHHHHHHHhCCceecC-c---cHH--HHHHHhCCchHHHHHHHHHHc
Q 028948 42 VLEDIFESMGQF-VDGLKFSGGSHS-LMPKPFIEEVVKRAHQHDVYVST-G---DWA--EHLIRNGPSAFKEYVEDCKQV 113 (201)
Q Consensus 42 ~l~DlLe~ag~y-ID~lKfg~GTs~-l~p~~~L~eKI~l~~~~gV~v~~-G---tlf--E~al~qg~~~~~eyl~~~k~l 113 (201)
.+++.++.+.+. .|.+=+.+.... ......+++.-++++++|+.+.. + .|. +-...+.-+.+++.++.|++|
T Consensus 17 ~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~l 96 (281)
T 3u0h_A 17 SLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARL 96 (281)
T ss_dssp CHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHT
T ss_pred CHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHHc
Confidence 455556555544 677777654321 11233478888999999998753 2 232 111122112688999999999
Q ss_pred CCCEEEec--CCcccCChhHHHHHHH-------HHHHCCCeEcccc
Q 028948 114 GFDTIELN--VGSLEIPEETLLRYVR-------LVKSAGLKAKPKF 150 (201)
Q Consensus 114 GFd~IEIS--dGti~i~~~~r~~lI~-------~~~~~Gf~v~pE~ 150 (201)
|.+.|-+. .+.-.-+.+.+.++++ .+++.|+++..|-
T Consensus 97 G~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 142 (281)
T 3u0h_A 97 GARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEY 142 (281)
T ss_dssp TCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEEC
T ss_pred CCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 99999843 2322223456666664 3467788876664
No 256
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=59.20 E-value=12 Score=35.47 Aligned_cols=50 Identities=10% Similarity=0.071 Sum_probs=37.1
Q ss_pred HHHHHHHcCCCEEEecCC----------cc-----cC-----ChhHHHHHHHHHHHCCCeEccccccccC
Q 028948 106 YVEDCKQVGFDTIELNVG----------SL-----EI-----PEETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdG----------ti-----~i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
-|+++++|||++|+++-= .- .+ +.++..++|+.++++|++|.-.+=....
T Consensus 159 ~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~ 228 (618)
T 3m07_A 159 KLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHF 228 (618)
T ss_dssp THHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred HHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCccC
Confidence 357889999999998632 11 11 3578999999999999999776655443
No 257
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=59.01 E-value=36 Score=26.70 Aligned_cols=41 Identities=29% Similarity=0.436 Sum_probs=29.9
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
++|++.+.+.|.|.|=+-.+..+ +..++++.+++.|.++-.
T Consensus 74 ~~~i~~~~~~gad~v~vh~~~~~----~~~~~~~~~~~~g~~i~~ 114 (220)
T 2fli_A 74 ERYVEAFAQAGADIMTIHTESTR----HIHGALQKIKAAGMKAGV 114 (220)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCS----CHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHcCCCEEEEccCccc----cHHHHHHHHHHcCCcEEE
Confidence 44778999999999988766543 344677777788877533
No 258
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=58.92 E-value=13 Score=38.00 Aligned_cols=146 Identities=12% Similarity=0.104 Sum_probs=95.1
Q ss_pred CCCCCCcchhHHHHHHHhh-cccccEEEeeCccccccChhHHHHHHHHHHhCCceec-----CccHH--HHHHHhCCchH
Q 028948 32 PHYTLSSSHNVLEDIFESM-GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS-----TGDWA--EHLIRNGPSAF 103 (201)
Q Consensus 32 kG~s~~~g~~~l~DlLe~a-g~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~-----~Gtlf--E~al~qg~~~~ 103 (201)
.||... ..+-.+..++.| ..-||.+-+...++-+.. .+.-++..++.|-.+. +++++ |.+-..+++.+
T Consensus 619 vgy~~~-pd~v~~~~v~~a~~~Gvd~irif~~~sd~~~---~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~ 694 (1150)
T 3hbl_A 619 VGYKNY-PDNVIHKFVQESAKAGIDVFRIFDSLNWVDQ---MKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYY 694 (1150)
T ss_dssp TCSSCC-CHHHHHHHHHHHHHTTCCEEEEECTTCCGGG---GHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHH
T ss_pred cccccC-CchhHHHHHHHHHhCCcCEEEEEeeCCHHHH---HHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHH
Confidence 345444 444455444443 445999999887666544 5667777888885432 23322 11111222346
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC----------CCcccccccccccEEEe
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK----------SDIPSDRDRAFGAYVAR 173 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~----------~dl~ag~~~a~g~~Vi~ 173 (201)
-+..+.+.++|.+.|-|.|-.--+.+.+-.++|+.++++ +. ..+++...+ ..+++|++ ++
T Consensus 695 ~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~-~~--~~i~~H~Hnt~G~a~An~laA~~aGa~-------~v 764 (1150)
T 3hbl_A 695 VKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSA-VD--LPIHLHTHDTSGNGLLTYKQAIDAGVD-------II 764 (1150)
T ss_dssp HHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHH-CC--SCEEEEECBTTSCHHHHHHHHHHTTCS-------EE
T ss_pred HHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHh-cC--CeEEEEeCCCCcHHHHHHHHHHHhCCC-------EE
Confidence 677778888999999999999999999999999999987 32 233333221 34678888 45
Q ss_pred cccCcCeeccccCCceee
Q 028948 174 APRSTDKLFLASNPEIEV 191 (201)
Q Consensus 174 E~Res~~v~~~~~~~~~~ 191 (201)
+.-=+|.=+-++||.+|-
T Consensus 765 D~ai~GlG~~~gn~~lE~ 782 (1150)
T 3hbl_A 765 DTAVASMSGLTSQPSANS 782 (1150)
T ss_dssp EEBCGGGCSBTSCCBHHH
T ss_pred EEeccccCCCCCCccHHH
Confidence 666677777899998873
No 259
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=58.71 E-value=9.9 Score=32.05 Aligned_cols=50 Identities=16% Similarity=0.053 Sum_probs=36.7
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc---------cCC---hhHHHHHHHHHHHCCCeEcccc
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGSL---------EIP---EETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGti---------~i~---~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
...++.++.++++||++|-|+-+.- .++ .+...++|+.++++|++|...+
T Consensus 36 ~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildl 97 (341)
T 1vjz_A 36 NFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISL 97 (341)
T ss_dssp CCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 3678899999999999999963211 121 2334689999999999996654
No 260
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=58.69 E-value=8.9 Score=32.24 Aligned_cols=49 Identities=18% Similarity=0.191 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc---------cCC---hhHHHHHHHHHHHCCCeEcccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSL---------EIP---EETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti---------~i~---~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
..++-++.++++||++|-|.-+.- .++ .+...++|+.++++|++|...+
T Consensus 29 ~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildl 89 (343)
T 1ceo_A 29 ITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDM 89 (343)
T ss_dssp SCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 347788999999999999863211 122 2344689999999999996554
No 261
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=58.45 E-value=19 Score=29.87 Aligned_cols=89 Identities=17% Similarity=0.235 Sum_probs=55.7
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC---CCcccccccccccEEE---ecccC
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK---SDIPSDRDRAFGAYVA---RAPRS 177 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~---~dl~ag~~~a~g~~Vi---~E~Re 177 (201)
++|++.+.+.|.|.|-+---.+. ..-.++++.+++.|.++-..+.-..+- .++-.+.| +|. +++--
T Consensus 70 ~~~i~~~~~aGAd~itvh~Ea~~---~~~~~~i~~i~~~G~k~gv~lnp~tp~~~~~~~l~~~D-----~VlvmsV~pGf 141 (231)
T 3ctl_A 70 QDYIAQLARAGADFITLHPETIN---GQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKAD-----KITVMTVDPGF 141 (231)
T ss_dssp GGTHHHHHHHTCSEEEECGGGCT---TTHHHHHHHHHHTTCEEEEEECTTCCGGGGTTTGGGCS-----EEEEESSCTTC
T ss_pred HHHHHHHHHcCCCEEEECcccCC---ccHHHHHHHHHHcCCeEEEEEECCCcHHHHHHHHhcCC-----EEEEeeeccCc
Confidence 45888889999999988754421 245689999999999975544322222 22334666 776 44433
Q ss_pred cCeecc-------------cc----CCceeeeeccccccc
Q 028948 178 TDKLFL-------------AS----NPEIEVGVGINKSRI 200 (201)
Q Consensus 178 s~~v~~-------------~~----~~~~~~~~~~~~~~~ 200 (201)
+|.-|. .+ |-.|+|.-|||.+.+
T Consensus 142 ggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~~ 181 (231)
T 3ctl_A 142 AGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATY 181 (231)
T ss_dssp SSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTTH
T ss_pred CCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHHH
Confidence 332222 11 456899999987653
No 262
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=58.42 E-value=11 Score=34.18 Aligned_cols=92 Identities=18% Similarity=0.333 Sum_probs=61.2
Q ss_pred ceeEecCCCCCCcchhHHHHHHHhhccc-ccEEEeeCccccccChhHHHHHHHHHHhCCceecCc---cHHHHHHHh--C
Q 028948 26 VTEMRSPHYTLSSSHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG---DWAEHLIRN--G 99 (201)
Q Consensus 26 lTmV~DkG~s~~~g~~~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G---tlfE~al~q--g 99 (201)
+-.|-|-.+ .-+-.|+ |.++ +|.+-+-.|.- -+++.+++.++.|++||+++--| |=+|.-+.. +
T Consensus 85 vPlvaDiHf-------~~~lal~-a~e~G~dklRINPGNi--g~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg 154 (366)
T 3noy_A 85 MPVIADIHF-------APSYAFL-SMEKGVHGIRINPGNI--GKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYG 154 (366)
T ss_dssp SCEEEECCS-------CHHHHHH-HHHTTCSEEEECHHHH--SCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHS
T ss_pred CCEEEeCCC-------CHHHHHH-HHHhCCCeEEECCccc--CchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcC
Confidence 445666555 2223333 4445 99999988874 35778999999999999988775 322222211 1
Q ss_pred -C------chHHHHHHHHHHcCCCEEEecCCcccC
Q 028948 100 -P------SAFKEYVEDCKQVGFDTIELNVGSLEI 127 (201)
Q Consensus 100 -~------~~~~eyl~~~k~lGFd~IEISdGti~i 127 (201)
+ .+.-++++.|.++||+-|=||--+-++
T Consensus 155 ~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~S~v 189 (366)
T 3noy_A 155 YPSAEALAESALRWSEKFEKWGFTNYKVSIKGSDV 189 (366)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECSSH
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCCeEEEeeecCCh
Confidence 1 245678899999999988887655433
No 263
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=58.28 E-value=12 Score=37.69 Aligned_cols=23 Identities=9% Similarity=0.121 Sum_probs=19.3
Q ss_pred hhHHHHHHHHHHHCCCeEccccc
Q 028948 129 EETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 129 ~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
.++..++|+.++++|++|+-.+=
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV 583 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVV 583 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEe
Confidence 48999999999999999955443
No 264
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=57.96 E-value=39 Score=28.46 Aligned_cols=41 Identities=24% Similarity=0.378 Sum_probs=32.7
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
.++|++.+.+.|.|.|-+-.-.. ++-.+.|+.+++.|.++-
T Consensus 98 p~~~i~~~~~aGAd~itvH~Ea~----~~~~~~i~~ir~~G~k~G 138 (246)
T 3inp_A 98 VDALIESFAKAGATSIVFHPEAS----EHIDRSLQLIKSFGIQAG 138 (246)
T ss_dssp CHHHHHHHHHHTCSEEEECGGGC----SCHHHHHHHHHTTTSEEE
T ss_pred HHHHHHHHHHcCCCEEEEccccc----hhHHHHHHHHHHcCCeEE
Confidence 36789999999999999874433 355789999999999883
No 265
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=57.53 E-value=22 Score=31.37 Aligned_cols=106 Identities=19% Similarity=0.256 Sum_probs=66.7
Q ss_pred chhHHHHHHHhhccc--ccEEEeeCccccccChhHHHHHHHHHHh--CCceecC----ccHHHHHHHhCCchHHHHHHHH
Q 028948 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSLMPKPFIEEVVKRAHQ--HDVYVST----GDWAEHLIRNGPSAFKEYVEDC 110 (201)
Q Consensus 39 g~~~l~DlLe~ag~y--ID~lKfg~GTs~l~p~~~L~eKI~l~~~--~gV~v~~----GtlfE~al~qg~~~~~eyl~~~ 110 (201)
....++.+|+.|-+- ==+|.++-|+...++.+.+...+..+.+ ++|+|.. |.-+| .+..|
T Consensus 26 n~e~~~avi~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e------------~~~~a 93 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFE------------SCEKA 93 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHH------------HHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHH------------HHHHH
Confidence 445556666554321 1145566666555666667777766654 6788775 33333 44456
Q ss_pred HHcCCCEEEecCCcccCCh--hHHHHHHHHHHHCCCeEccccccccCC
Q 028948 111 KQVGFDTIELNVGSLEIPE--ETLLRYVRLVKSAGLKAKPKFAVMFNK 156 (201)
Q Consensus 111 k~lGFd~IEISdGti~i~~--~~r~~lI~~~~~~Gf~v~pE~g~k~~~ 156 (201)
-+.||+.|=|.--.+++.+ +.=.++++.++..|.-|-.|+|.=-+.
T Consensus 94 i~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~ 141 (307)
T 3n9r_A 94 VKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGI 141 (307)
T ss_dssp HHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC
T ss_pred HHhCCCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccc
Confidence 7899999998554444332 122378889999999999999965443
No 266
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=57.26 E-value=15 Score=32.83 Aligned_cols=45 Identities=16% Similarity=0.262 Sum_probs=35.2
Q ss_pred chHHHHHHHHHH-----cCCCEEEecCCccc---------------CChhHHHHHHHHHHHCCCeE
Q 028948 101 SAFKEYVEDCKQ-----VGFDTIELNVGSLE---------------IPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 101 ~~~~eyl~~~k~-----lGFd~IEISdGti~---------------i~~~~r~~lI~~~~~~Gf~v 146 (201)
+.+.++.+.+++ +|++.|-|.||-.. +|. ....+++.+++.||++
T Consensus 26 ~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~-Gl~~l~~~i~~~Glk~ 90 (397)
T 3a5v_A 26 QLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPR-GIKPLVDDIHNLGLKA 90 (397)
T ss_dssp HHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTT-CHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCc-CHHHHHHHHHHcCCEE
Confidence 467888888777 89999999877553 232 3568999999999997
No 267
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=57.14 E-value=16 Score=34.92 Aligned_cols=27 Identities=7% Similarity=0.005 Sum_probs=24.2
Q ss_pred cCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 126 EIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 126 ~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
..+.++-.++++.|+++|..|.||+-.
T Consensus 141 ~YT~~di~eiv~yA~~rgI~VIPEID~ 167 (627)
T 2epl_X 141 RYTVAELQEIEDYAADFDMSFVPCIQT 167 (627)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEeecc
Confidence 468899999999999999999999853
No 268
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=57.13 E-value=7.7 Score=29.73 Aligned_cols=95 Identities=17% Similarity=0.141 Sum_probs=52.4
Q ss_pred ccccEEEeeCccc--ccc------ChhHHHHHHHHHHhCCceecCcc-HHHHHHHhCCchHHHHHHHHHHc-CC-CEEEe
Q 028948 52 QFVDGLKFSGGSH--SLM------PKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQV-GF-DTIEL 120 (201)
Q Consensus 52 ~yID~lKfg~GTs--~l~------p~~~L~eKI~l~~~~gV~v~~Gt-lfE~al~qg~~~~~eyl~~~k~l-GF-d~IEI 120 (201)
+++|.+-++.=+. ..+ +.+.+.+-|+.++++|+.+..-+ +..-. ..+.+.+++.++.++++ |+ +.+.+
T Consensus 53 ~~~d~v~isld~~~~~~~~~~~g~~~~~i~~~i~~l~~~g~~v~i~~~v~~~~-n~n~~~~~~~~~~~~~~~g~~~~~~l 131 (182)
T 3can_A 53 RNCELLLIDLKSMDSTVHQTFCDVPNELILKNIRRVAEADFPYYIRIPLIEGV-NADEKNIKLSAEFLASLPRHPEIINL 131 (182)
T ss_dssp HTCSEEEEECCCSCHHHHHHHHSSCSHHHHHHHHHHHHTTCCEEEEEEECBTT-TCSHHHHHHHHHHHHHSSSCCSEEEE
T ss_pred hhCCEEEEECCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCeEEEEEEEECCC-CCCHHHHHHHHHHHHhCcCccceEEE
Confidence 4477777765332 111 12456667777777776544321 11100 01123577788888888 88 77776
Q ss_pred cC----Cc---------------ccCChhH--HHHHHHHHHHCCCeEc
Q 028948 121 NV----GS---------------LEIPEET--LLRYVRLVKSAGLKAK 147 (201)
Q Consensus 121 Sd----Gt---------------i~i~~~~--r~~lI~~~~~~Gf~v~ 147 (201)
.. |. -..+.++ ..++.+.+++.|+.+.
T Consensus 132 ~~~~p~g~~~~~~l~~~y~~~~~~~~~~e~~~l~~~~~~~~~~g~~~~ 179 (182)
T 3can_A 132 LPYHDIGKGKHAKLGSIYNPKGYKMQTPSEEVQQQCIQILTDYGLKAT 179 (182)
T ss_dssp EECCC------------------CCBCCCHHHHHHHHHHHHHTTCCEE
T ss_pred ecCcccCHHHHHHhCCcCcccCCCCCCHHHHHHHHHHHHHHHcCCceE
Confidence 42 11 1223444 5677788888888765
No 269
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=57.09 E-value=18 Score=30.76 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=38.7
Q ss_pred CchHHHHHHHHHHcCCCE-EEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 100 PSAFKEYVEDCKQVGFDT-IELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~-IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
+....+.+++|-+.|... |+++.|+ +.++..++++.+++.|.++.
T Consensus 74 ~~~~~~~~~ea~~~Gi~~iVi~t~G~---~~~~~~~l~~~A~~~gv~li 119 (288)
T 2nu8_A 74 APFCKDSILEAIDAGIKLIITITEGI---PTLDMLTVKVKLDEAGVRMI 119 (288)
T ss_dssp GGGHHHHHHHHHHTTCSEEEECCCCC---CHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHHHHHcCCEEE
Confidence 457899999999999996 8988875 67777899999999999874
No 270
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=57.02 E-value=14 Score=35.28 Aligned_cols=46 Identities=11% Similarity=0.172 Sum_probs=36.9
Q ss_pred hHHHHHHHHHHcCCCEEEec---------CCcccCChhHHHHHHHHHHHCCCeEccc
Q 028948 102 AFKEYVEDCKQVGFDTIELN---------VGSLEIPEETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEIS---------dGti~i~~~~r~~lI~~~~~~Gf~v~pE 149 (201)
..+++.+.+|++||++|.+. .|..+.+ ...++|+.++++|++|.-.
T Consensus 74 ~~~~~W~~mKa~G~NtVr~~V~W~~hEP~~G~yDF~--~LD~~ldla~e~GL~VIL~ 128 (552)
T 3u7v_A 74 QMAKVWPAIEKVGANTVQVPIAWEQIEPVEGQFDFS--YLDLLLEQARERKVRLVLL 128 (552)
T ss_dssp GHHHHHHHHHHHTCSEEEEEEEHHHHCSBTTBCCCH--HHHHHHHHHHHTTCEEEEE
T ss_pred hhHHHHHHHHHhCCCEEEEEehhhccCCCCCccChh--hHHHHHHHHHHCCCEEEEE
Confidence 56888899999999999996 3444432 3678999999999999775
No 271
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=56.94 E-value=40 Score=26.84 Aligned_cols=57 Identities=16% Similarity=0.323 Sum_probs=38.6
Q ss_pred hhHHHHHHHHHHhCCcee---cC-ccH----H---HHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc
Q 028948 69 KPFIEEVVKRAHQHDVYV---ST-GDW----A---EHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL 125 (201)
Q Consensus 69 ~~~L~eKI~l~~~~gV~v---~~-Gtl----f---E~al~qg~~~~~eyl~~~k~lGFd~IEISdGti 125 (201)
.+.+++.-++++++|+.+ +. +.+ . +....+.-+.+++.++.|++||.+.|=+.-|..
T Consensus 46 ~~~~~~~~~~l~~~gl~~~~~~~h~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lG~~~v~~~~g~~ 113 (287)
T 2x7v_A 46 DEAATKFKREMKKHGIDWENAFCHSGYLINLASPKDDIWQKSVELLKKEVEICRKLGIRYLNIHPGSH 113 (287)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEECCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCEEEECCEEC
T ss_pred HHHHHHHHHHHHHcCCCcceeEEecccccccCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCC
Confidence 456888899999999973 22 222 1 111111112688999999999999998877754
No 272
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=56.86 E-value=13 Score=30.68 Aligned_cols=136 Identities=14% Similarity=0.077 Sum_probs=74.1
Q ss_pred CceeEecCCCCCCcchh----HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceec----C--ccHHHH
Q 028948 25 GVTEMRSPHYTLSSSHN----VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS----T--GDWAEH 94 (201)
Q Consensus 25 GlTmV~DkG~s~~~g~~----~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~----~--GtlfE~ 94 (201)
|...++|=.+-= -++ +.+.+.+.- .|++=+ ++....+.++.-++.++++|..+. . -++.+.
T Consensus 64 g~~v~lD~Kl~D--ipnTv~~~~~~~~~~g---ad~vtv----h~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~~~ 134 (228)
T 3m47_A 64 GCRIIADFKVAD--IPETNEKICRATFKAG---ADAIIV----HGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAEMF 134 (228)
T ss_dssp CCEEEEEEEECS--CHHHHHHHHHHHHHTT---CSEEEE----ESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGGTT
T ss_pred CCeEEEEEeecc--cHhHHHHHHHHHHhCC---CCEEEE----eccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHH
Confidence 556666666521 122 444454432 344333 223345678888888887764332 1 133332
Q ss_pred HHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCC-eEccccccc--cCCCCcccccccccccEE
Q 028948 95 LIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL-KAKPKFAVM--FNKSDIPSDRDRAFGAYV 171 (201)
Q Consensus 95 al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf-~v~pE~g~k--~~~~dl~ag~~~a~g~~V 171 (201)
.+ +.++++.+.+++.|++.+-+|. + ..+..+.|+......| .+.|-+|.+ .+ ..+.+|++ +
T Consensus 135 --~~--~~~~~~a~~a~~~G~~GvV~~a-t----~~~e~~~ir~~~~~~~~iv~PGI~~~g~~p-~~~~aGad-----~- 198 (228)
T 3m47_A 135 --IQ--GAADEIARMGVDLGVKNYVGPS-T----RPERLSRLREIIGQDSFLISPGVGAQGGDP-GETLRFAD-----A- 198 (228)
T ss_dssp --HH--HHHHHHHHHHHHTTCCEEECCS-S----CHHHHHHHHHHHCSSSEEEECC----------CGGGTCS-----E-
T ss_pred --HH--HHHHHHHHHHHHhCCcEEEECC-C----ChHHHHHHHHhcCCCCEEEecCcCcCCCCH-hHHHcCCC-----E-
Confidence 12 2678899999999999887765 1 2234455665554434 478866665 34 55666666 4
Q ss_pred EecccCcCeeccccCCc
Q 028948 172 ARAPRSTDKLFLASNPE 188 (201)
Q Consensus 172 i~E~Res~~v~~~~~~~ 188 (201)
++-+|. ++-++||.
T Consensus 199 iVvGr~---I~~a~dp~ 212 (228)
T 3m47_A 199 IIVGRS---IYLADNPA 212 (228)
T ss_dssp EEECHH---HHTSSCHH
T ss_pred EEECHH---HhCCCCHH
Confidence 555664 56777875
No 273
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=56.64 E-value=16 Score=31.42 Aligned_cols=50 Identities=16% Similarity=0.223 Sum_probs=39.3
Q ss_pred HhCCchHHHHHHHHHHcCCCEEEecCCcccCC-------------hhHHHHHHHHHHHCCCeE
Q 028948 97 RNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP-------------EETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 97 ~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~-------------~~~r~~lI~~~~~~Gf~v 146 (201)
.++-..+.+-++++.+.||+.+|||..++.+- .++..++-+.+++.|+.+
T Consensus 57 ~~nl~~l~~~l~~~~~~gi~~~ri~s~~f~~ft~~~~~w~~~~~~~~~~~~~~~~~~~~gi~i 119 (301)
T 2j6v_A 57 AENLRDLERILRFNADHGFALFRIGQHLIPFASHPLFPYDWEGAYEEELARLGALARAFGQRL 119 (301)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEECCGGGSTTTTSTTCCSCHHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEeccCcccccCCCcccCCcCCCCHHHHHHHHHHHHHcCCeE
Confidence 34334788899999999999999987776553 356667888899999976
No 274
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=56.63 E-value=17 Score=32.74 Aligned_cols=45 Identities=20% Similarity=0.269 Sum_probs=36.2
Q ss_pred chHHHHHHHH-----HHcCCCEEEecCCccc---------------CChhHHHHHHHHHHHCCCeE
Q 028948 101 SAFKEYVEDC-----KQVGFDTIELNVGSLE---------------IPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 101 ~~~~eyl~~~-----k~lGFd~IEISdGti~---------------i~~~~r~~lI~~~~~~Gf~v 146 (201)
+.+.++.+.+ +++|++.|-|.||-.. +|. ....+++.+++.|||+
T Consensus 29 ~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~-Gl~~l~~~i~~~Glk~ 93 (417)
T 1szn_A 29 SKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPD-GIDGLAKKVHALGLKL 93 (417)
T ss_dssp HHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTT-HHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCc-CHHHHHHHHHHcCCEE
Confidence 4788888888 8999999999887542 232 4669999999999997
No 275
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=56.53 E-value=9.1 Score=30.70 Aligned_cols=80 Identities=14% Similarity=0.151 Sum_probs=60.0
Q ss_pred EEEeeCccccccChhHHHHHHHHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH
Q 028948 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL 133 (201)
Q Consensus 56 ~lKfg~GTs~l~p~~~L~eKI~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~ 133 (201)
+-|-.+. +++..+ |. ++++++|| .+. .|-..++|+.+- .. .+.++||+++=++|.+-+.+++...
T Consensus 104 i~K~~~s--aF~~t~-L~---~~L~~~gi~~lvi~G~~T~~CV~~T--a~-----da~~~Gy~V~vv~Da~as~~~~~h~ 170 (204)
T 3hu5_A 104 LVKTRFS--AFMGTE-CD---MLLRRRGVDTLLVSGTQYPNCIRGT--AV-----DAFALDYDVVVVTDACSARTPGVAE 170 (204)
T ss_dssp EECSSSS--TTTTSS-HH---HHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSSHHHHH
T ss_pred EECCccC--CCCCcC-HH---HHHHhCCCCeEEEeeeccchHHHHH--HH-----HHHHCCCEEEEehhhhCCCCHHHHH
Confidence 5665543 344333 44 35577899 344 487889998885 44 4568999999999999999999999
Q ss_pred HHHHHHHHCCCeEcc
Q 028948 134 RYVRLVKSAGLKAKP 148 (201)
Q Consensus 134 ~lI~~~~~~Gf~v~p 148 (201)
..++..+..|-.|.+
T Consensus 171 ~al~~m~~~g~~v~t 185 (204)
T 3hu5_A 171 SNINDMRAMGITCVP 185 (204)
T ss_dssp HHHHHHHHHTCEEEC
T ss_pred HHHHHHHHhCCEEEE
Confidence 999999999887744
No 276
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=56.48 E-value=14 Score=35.19 Aligned_cols=44 Identities=16% Similarity=0.120 Sum_probs=26.7
Q ss_pred hHHHHHHHHHHcCCCEEEecC----------CcccCChhHHHHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELNV----------GSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISd----------Gti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
..++=++.+|++||++|.++- |..+ -+...++|+.++++|++|.
T Consensus 24 ~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~--f~~ld~~i~~~~~~Gi~vi 77 (675)
T 3tty_A 24 TMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYD--FTWLDDIIERLTKENIYLC 77 (675)
T ss_dssp HHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSCBC--CHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeeechhhhCCcCCccC--HHHHHHHHHHHHHCCCEEE
Confidence 455556666666666666654 3222 2445567777777777774
No 277
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=56.40 E-value=76 Score=28.33 Aligned_cols=54 Identities=15% Similarity=0.216 Sum_probs=34.6
Q ss_pred cChhHHHHHHHHHHhCCceecCc---cHHHHHHHhCC------chHHHHHHHHHHcCCCEEEe
Q 028948 67 MPKPFIEEVVKRAHQHDVYVSTG---DWAEHLIRNGP------SAFKEYVEDCKQVGFDTIEL 120 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV~v~~G---tlfE~al~qg~------~~~~eyl~~~k~lGFd~IEI 120 (201)
.+.+.+++.-+++.++|+.++.. .+.|......+ +.+++-++.|.++|.++|=.
T Consensus 61 w~~~~i~~lk~~l~~~GL~i~~i~s~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 61 WPLENILELKKMVEEAGLEITVIESIPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEECCCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCEEEEEeccccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 34455788888888888877653 13333222211 24667778888899998865
No 278
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=56.21 E-value=15 Score=36.59 Aligned_cols=27 Identities=7% Similarity=0.068 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHHHCCCeEccccccccC
Q 028948 129 EETLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 129 ~~~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
.++..++|+.++++|++|.-.+=....
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~ 395 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHT 395 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccc
Confidence 388999999999999999766555443
No 279
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=56.16 E-value=43 Score=26.43 Aligned_cols=48 Identities=15% Similarity=0.088 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCC-----hhHH-------HHHHHHHHHCCCeEccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIP-----EETL-------LRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~-----~~~r-------~~lI~~~~~~Gf~v~pE 149 (201)
.+++.++.|+.+|.+.|=+-.|...-. ++.+ .++.+.+++.|.++..|
T Consensus 77 ~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE 136 (254)
T 3ayv_A 77 RLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTLGVRLLLE 136 (254)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhcCCEEEEc
Confidence 688999999999999998877765432 1212 35556677788887554
No 280
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=55.86 E-value=37 Score=29.08 Aligned_cols=114 Identities=10% Similarity=0.033 Sum_probs=66.4
Q ss_pred CCceeEecCCCCCC-cchhHHHHHHHhhcc-cccEEEeeCccccccChhHHHHH-HHHHHh-CCcee--cCccHHHHHHH
Q 028948 24 FGVTEMRSPHYTLS-SSHNVLEDIFESMGQ-FVDGLKFSGGSHSLMPKPFIEEV-VKRAHQ-HDVYV--STGDWAEHLIR 97 (201)
Q Consensus 24 ~GlTmV~DkG~s~~-~g~~~l~DlLe~ag~-yID~lKfg~GTs~l~p~~~L~eK-I~l~~~-~gV~v--~~GtlfE~al~ 97 (201)
+|.-+++-+|++.. ......-+.+...|. .|=.+.=|.-|..-|+.+.+.-. |..+++ +|++| ++. |...
T Consensus 144 ~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~~~lpVi~dss----H~~g 219 (276)
T 1vs1_A 144 SGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEATHLPVIVDPS----HPAG 219 (276)
T ss_dssp HTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHHBSSCEEECCH----HHHC
T ss_pred cCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHHhCCCEEEeCC----CCCC
Confidence 46778999998521 122233344445564 33333323322223566656666 777777 58876 342 1110
Q ss_pred hCCchHHHHHHHHHHcCCC--EEEe--------cCCcccCChhHHHHHHHHHHHC
Q 028948 98 NGPSAFKEYVEDCKQVGFD--TIEL--------NVGSLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 98 qg~~~~~eyl~~~k~lGFd--~IEI--------SdGti~i~~~~r~~lI~~~~~~ 142 (201)
+ .+-+.+--..+..+|.+ .||. |||.-+|++++..++++.+++.
T Consensus 220 ~-~~~~~~~~~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~~~~lv~~i~~~ 273 (276)
T 1vs1_A 220 R-RSLVPALAKAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGEFARLMGELRWH 273 (276)
T ss_dssp S-GGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHHHHHHHHHHHHT
T ss_pred c-cchHHHHHHHHHHcCCCEEEEEecCCcccCCCchhcCCCHHHHHHHHHHHHHH
Confidence 0 01122222334669999 9996 7999999999999999988753
No 281
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron} PDB: 3co4_A
Probab=55.81 E-value=25 Score=29.81 Aligned_cols=71 Identities=15% Similarity=0.258 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHhCCceecC--ccHH----HHHHHhCCc----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHH
Q 028948 70 PFIEEVVKRAHQHDVYVST--GDWA----EHLIRNGPS----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLV 139 (201)
Q Consensus 70 ~~L~eKI~l~~~~gV~v~~--Gtlf----E~al~qg~~----~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~ 139 (201)
..+++.++.+|..|++|.. |||. -.++. .++ -++.-++.+++.|||.|.|.=-...-..+....+++.+
T Consensus 52 ~~~~~~~~k~~~~~lkvllsiGG~~~~~~~~~~~-~~~~r~~fi~si~~~~~~~~~DGiDiDwE~~p~~~~~~~~ll~eL 130 (312)
T 3fnd_A 52 KRIESVRETAHKHNVKILISLAKNSPGEFTTAIN-DPKARKELIQQIIAFTKEYKLDGFDIDYEEYDNWDKNFPSLLVFA 130 (312)
T ss_dssp TTHHHHHHHHHHTTCEEEEEEEESSTTHHHHHHH-SHHHHHHHHHHHHHHHHHTTCSEEEECCCCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEEEcCCCCchhhHHhC-CHHHHHHHHHHHHHHHHHcCCCeEEEeeeeCCCchHHHHHHHHHH
Confidence 3478888889999998876 7652 22222 222 35566678899999999997321111125666777766
Q ss_pred HH
Q 028948 140 KS 141 (201)
Q Consensus 140 ~~ 141 (201)
++
T Consensus 131 r~ 132 (312)
T 3fnd_A 131 RG 132 (312)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 282
>3l52_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, PSI-2, protein structure initiative; 1.35A {Streptomyces avermitilis} PDB: 3v75_A*
Probab=55.22 E-value=9.9 Score=33.12 Aligned_cols=116 Identities=18% Similarity=0.182 Sum_probs=73.4
Q ss_pred ceeEecCCCCCCcc----------hhHHHHHHHhhcccccEEEeeCccccccChh---HHHHHHHHHHhCCceecCc-cH
Q 028948 26 VTEMRSPHYTLSSS----------HNVLEDIFESMGQFVDGLKFSGGSHSLMPKP---FIEEVVKRAHQHDVYVSTG-DW 91 (201)
Q Consensus 26 lTmV~DkG~s~~~g----------~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~---~L~eKI~l~~~~gV~v~~G-tl 91 (201)
|-.=+||-.+.++. ..+..++++..++|+.++|+|+--..-+..+ .|++.++.++++|..|..- =+
T Consensus 25 LcvglDp~~~~lp~~~l~~~~~~~~~~~~~ivd~l~~~v~~~Kvg~~lf~~~G~~G~~~l~~~i~~l~~~g~~VflDlK~ 104 (284)
T 3l52_A 25 LCVGIDPHASLLADWGLSDDVAGLERFSRTVVEALGEHVAVFKPQSAFFERFGSRGVAVLEKTVAEARAAGALVVMDAKR 104 (284)
T ss_dssp CEEEECCCHHHHHHTTCCSSHHHHHHHHHHHHHHHTTTCSEEEEBHHHHHTTHHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred eEEEECCChhhccccccccchHHHHHHHHHHHHHhCCcceEEEeeHHHHHhcCHHHHHHHHHHHHHHHHCCCcEEEEecc
Confidence 55567777543211 1578899999999999999998665555444 6888999999999888763 12
Q ss_pred HHHHHHhCCchHHHHHHHHH----HcCCCEEEecCCcccCChhHHHHHHHHHH--HCCCeEccc
Q 028948 92 AEHLIRNGPSAFKEYVEDCK----QVGFDTIELNVGSLEIPEETLLRYVRLVK--SAGLKAKPK 149 (201)
Q Consensus 92 fE~al~qg~~~~~eyl~~~k----~lGFd~IEISdGti~i~~~~r~~lI~~~~--~~Gf~v~pE 149 (201)
..+- +-+..|.+.+- .+|+|+|-|+- -+..+....+++.++ ..|..|..+
T Consensus 105 ~DIp-----nTv~~ya~~~~~~~~~lg~D~vTvh~---~~G~~~l~~~~~~a~~~~kgvfvL~~ 160 (284)
T 3l52_A 105 GDIG-----STMAAYAEAFLRKDSPLFSDALTVSP---YLGYGSLRPAVELARESGAGLFVLAL 160 (284)
T ss_dssp CCCH-----HHHHHHHHHHSSTTSTTCCSEEEECC---TTCGGGGHHHHHHHHHHTCEEEEEEE
T ss_pred cCcH-----HHHHHHHHHHhccccccCCcEEEEec---cCCHHHHHHHHHHHHhcCCeEEEEEe
Confidence 2221 23445665542 58999998853 122333444555554 345666443
No 283
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=55.03 E-value=5.3 Score=34.96 Aligned_cols=70 Identities=20% Similarity=0.288 Sum_probs=39.5
Q ss_pred HHHHHHHHHHhC-------CceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc----C--ChhHHHHHHH
Q 028948 71 FIEEVVKRAHQH-------DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE----I--PEETLLRYVR 137 (201)
Q Consensus 71 ~L~eKI~l~~~~-------gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~----i--~~~~r~~lI~ 137 (201)
.+.|.|+-.++. +|++++..|.+--+ ..+...++.+.+.+.|.|+|++|+|... + ++.....+++
T Consensus 204 ~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g~--~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ 281 (349)
T 3hgj_A 204 FPLQVAQAVREVVPRELPLFVRVSATDWGEGGW--SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFAD 281 (349)
T ss_dssp HHHHHHHHHHHHSCTTSCEEEEEESCCCSTTSC--CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHH
T ss_pred HHHHHHHHHHHHhcCCceEEEEeccccccCCCC--CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHH
Confidence 456666666653 34666644433100 0113445667777889999999987542 1 2223345666
Q ss_pred HHHHC
Q 028948 138 LVKSA 142 (201)
Q Consensus 138 ~~~~~ 142 (201)
++++.
T Consensus 282 ~ir~~ 286 (349)
T 3hgj_A 282 AVRKR 286 (349)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 284
>1xla_A D-xylose isomerase; isomerase(intramolecular oxidoreductase); 2.30A {Arthrobacter SP} SCOP: c.1.15.3 PDB: 1die_A* 1did_A 1xlb_A 1xlc_A* 1xld_A* 1xle_A 1xlf_A* 1xlg_A* 1xlh_A 1xli_A* 1xlj_A* 1xlk_A 1xll_A 1xlm_A* 4xia_A* 5xia_A*
Probab=54.98 E-value=18 Score=31.60 Aligned_cols=70 Identities=17% Similarity=0.250 Sum_probs=45.1
Q ss_pred HHHHHHHHHhCCceec-Cc--c-------HHHHHHHhCCchHHHHHHHHHHcCCCEEEecC----------Ccc-cCChh
Q 028948 72 IEEVVKRAHQHDVYVS-TG--D-------WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNV----------GSL-EIPEE 130 (201)
Q Consensus 72 L~eKI~l~~~~gV~v~-~G--t-------lfE~al~qg~~~~~eyl~~~k~lGFd~IEISd----------Gti-~i~~~ 130 (201)
+.++++.++++|..-. .. . +-+. . ..++++.+.+++.|+..+-++. |.+ +-+++
T Consensus 35 l~e~l~~aa~~G~d~VEl~~~~~~~~~~~~~~~---~--~~~~~l~~~l~~~GL~i~~~~~~~f~~p~~~~g~l~~~d~~ 109 (394)
T 1xla_A 35 PVEAVHKLAELGAYGITFHDNDLIPFDATEAER---E--KILGDFNQALKDTGLKVPMVTTNLFSHPVFKDGGFTSNDRS 109 (394)
T ss_dssp HHHHHHHHHHHTCCEEEEEHHHHSCTTCCHHHH---H--HHHHHHHHHHHHHCCBCCEEECCCSSSGGGTTCSTTCSSHH
T ss_pred HHHHHHHHHHcCCCEEEecCCccCcccCCchhh---H--HHHHHHHHHHHHcCCeEEEEecCccCCccccCCccCCCCHH
Confidence 8999999999997322 11 1 1111 1 2688999999999998776643 222 22332
Q ss_pred -------HHHHHHHHHHHCCCeE
Q 028948 131 -------TLLRYVRLVKSAGLKA 146 (201)
Q Consensus 131 -------~r~~lI~~~~~~Gf~v 146 (201)
...+.|+.+++.|-+.
T Consensus 110 ~r~~~i~~~~~~i~~A~~LGa~~ 132 (394)
T 1xla_A 110 IRRFALAKVLHNIDLAAEMGAET 132 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCE
Confidence 2457788888888764
No 285
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=54.80 E-value=22 Score=28.33 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=60.4
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhC-CceecCcc-HHHHHHHhCCchHHHHHHHHHHcCCC
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFD 116 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~-gV~v~~Gt-lfE~al~qg~~~~~eyl~~~k~lGFd 116 (201)
.+....++++..|++++.+|.+.|-+.-+..+.+++. +++ |..+..-- +..+ ++....|++.+.++|.|
T Consensus 10 ~l~~~~~~~~~~~~~~~~~kv~~~~f~~~G~~~i~~l----r~~~~~~v~~D~kl~DI-----~~t~~~~v~~~~~~Gad 80 (208)
T 2czd_A 10 EGERAIKIAKSVKDYISMIKVNWPLILGSGVDIIRRL----KEETGVEIIADLKLADI-----PNTNRLIARKVFGAGAD 80 (208)
T ss_dssp SHHHHHHHHHHHGGGCSEEEEEHHHHHHHCTTHHHHH----HHHHCCEEEEEEEECSC-----HHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHhcccccEEEecHHHHHhhCHHHHHHH----HHcCCCEEEEEeeeCch-----HHHHHHHHHHHHhcCCC
Confidence 4567778889999999999999999877777767652 222 44333210 1111 12345677777788888
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHC-CCeEccccc
Q 028948 117 TIELNVGSLEIPEETLLRYVRLVKSA-GLKAKPKFA 151 (201)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~-Gf~v~pE~g 151 (201)
.|-++--.- .+ .|+.+++. |..+.|+..
T Consensus 81 ~vtvh~~~g---~~----~i~~~~~~~gv~vl~~t~ 109 (208)
T 2czd_A 81 YVIVHTFVG---RD----SVMAVKELGEIIMVVEMS 109 (208)
T ss_dssp EEEEESTTC---HH----HHHHHHTTSEEEEECCCC
T ss_pred EEEEeccCC---HH----HHHHHHHhCCcEEEEecC
Confidence 887775432 22 25555555 666665543
No 286
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=54.50 E-value=15 Score=31.28 Aligned_cols=45 Identities=18% Similarity=0.283 Sum_probs=38.5
Q ss_pred CchHHHHHHHHHHcCCC-EEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 100 PSAFKEYVEDCKQVGFD-TIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd-~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
|....+.+++|-+.|.. .|.++.|+ +.++..++.+.+++.|+.+.
T Consensus 74 ~~~~~~~~~ea~~~Gi~~vVi~t~G~---~~~~~~~l~~~a~~~gi~vi 119 (288)
T 1oi7_A 74 APAAADAALEAAHAGIPLIVLITEGI---PTLDMVRAVEEIKALGSRLI 119 (288)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCSCC---CHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCC---CHHHHHHHHHHHHHcCCEEE
Confidence 35688999999999999 78889885 67778899999999999774
No 287
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=54.06 E-value=60 Score=24.55 Aligned_cols=13 Identities=8% Similarity=0.084 Sum_probs=6.2
Q ss_pred hHHHHHHHHHHHC
Q 028948 130 ETLLRYVRLVKSA 142 (201)
Q Consensus 130 ~~r~~lI~~~~~~ 142 (201)
++..++++.+++.
T Consensus 110 ~~~~~~~~~~~~~ 122 (182)
T 3can_A 110 KNIKLSAEFLASL 122 (182)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhC
Confidence 3444455555544
No 288
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=54.06 E-value=81 Score=26.76 Aligned_cols=101 Identities=14% Similarity=0.108 Sum_probs=69.5
Q ss_pred ccEEEeeCccccccChhHHHHHHHHHHhC-CceecCcc----HHHHHHHh--CC----------chHHHHHHHHHHcCCC
Q 028948 54 VDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGD----WAEHLIRN--GP----------SAFKEYVEDCKQVGFD 116 (201)
Q Consensus 54 ID~lKfg~GTs~l~p~~~L~eKI~l~~~~-gV~v~~Gt----lfE~al~q--g~----------~~~~eyl~~~k~lGFd 116 (201)
-|+|=+|.+++.--..+.+...|+..++. +++++--| -+|.|+.. |. +++++.+..++++|..
T Consensus 48 AdiIDIg~~s~~~eE~~rv~~vi~~l~~~~~~pisIDT~~~~v~~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~ 127 (271)
T 2yci_X 48 AHYLDVNTGPTADDPVRVMEWLVKTIQEVVDLPCCLDSTNPDAIEAGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAA 127 (271)
T ss_dssp CSEEEEECCSCSSCHHHHHHHHHHHHHHHCCCCEEEECSCHHHHHHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHHTCE
T ss_pred CCEEEEcCCcCchhHHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHHhCCCCCEEEECCCCccccHHHHHHHHHcCCC
Confidence 45555788886554555677778877765 99998753 68888877 53 2347899999999999
Q ss_pred EEEecCCc--ccCC----hhHHHHHHHHHHHCCCe---Ecccccccc
Q 028948 117 TIELNVGS--LEIP----EETLLRYVRLVKSAGLK---AKPKFAVMF 154 (201)
Q Consensus 117 ~IEISdGt--i~i~----~~~r~~lI~~~~~~Gf~---v~pE~g~k~ 154 (201)
.|=....- +.-+ .+...+.++++.+.|+. ..-.-|+-|
T Consensus 128 vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gf 174 (271)
T 2yci_X 128 IIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILP 174 (271)
T ss_dssp EEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCC
T ss_pred EEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCc
Confidence 88876421 2223 33445688889999987 444445555
No 289
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=54.06 E-value=94 Score=25.78 Aligned_cols=81 Identities=17% Similarity=0.206 Sum_probs=53.2
Q ss_pred cccccEEEeeCc----------cccccChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 028948 51 GQFVDGLKFSGG----------SHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (201)
Q Consensus 51 g~yID~lKfg~G----------Ts~l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEI 120 (201)
..-.|++|+-.. ....++.+.+++.++.+|++|+++..=. .+ ++-++.+.+.|.+.||=
T Consensus 178 ~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~-------~~----~~~i~~~~~~g~~~i~H 246 (403)
T 3gnh_A 178 KYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHA-------HG----ASGIREAVRAGVDTIEH 246 (403)
T ss_dssp HTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEE-------CS----HHHHHHHHHTTCSEEEE
T ss_pred HcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEe-------CC----HHHHHHHHHhCCCEEec
Confidence 345789998631 2345778889999999999999987521 11 11133445668888875
Q ss_pred cCCcccCChhHHHHHHHHHHHCCCeEccc
Q 028948 121 NVGSLEIPEETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 121 SdGti~i~~~~r~~lI~~~~~~Gf~v~pE 149 (201)
.. -+++ +.++++++.|..+.|.
T Consensus 247 ~~---~~~~----~~~~~~~~~g~~~~~~ 268 (403)
T 3gnh_A 247 AS---LVDD----EGIKLAVQKGAYFSMD 268 (403)
T ss_dssp CT---TCCH----HHHHHHHHHTCEEECC
T ss_pred CC---cCCH----HHHHHHHHCCCEEEee
Confidence 43 2333 4567778888887653
No 290
>1a0c_A Xylose isomerase; ketolisomerase, xylose metabolism, glucose-fructose interconversion, hydride transfer; 2.50A {Thermoanaerobacteriumthermosulfurigenes} SCOP: c.1.15.3 PDB: 1a0d_A 1a0e_A
Probab=53.96 E-value=11 Score=34.44 Aligned_cols=50 Identities=8% Similarity=0.018 Sum_probs=34.7
Q ss_pred HHHhCCchHHHHHHHHHHcCCCEEEecCCcc-cC--C--------hhHHHHHHHHHHHCCCeE
Q 028948 95 LIRNGPSAFKEYVEDCKQVGFDTIELNVGSL-EI--P--------EETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 95 al~qg~~~~~eyl~~~k~lGFd~IEISdGti-~i--~--------~~~r~~lI~~~~~~Gf~v 146 (201)
...+. ++++.++.++++||+.||+.+-.+ .. + .+.+.++-+.+++.|+++
T Consensus 76 ~~~~~--~~~~ale~~a~lG~~~VE~~~~~~~p~~~~~~e~~~~l~~~~~~lk~~l~~~GL~~ 136 (438)
T 1a0c_A 76 DIAKA--RVEAAFEFFDKINAPYFCFHDRDIAPEGDTLRETNKNLDTIVAMIKDYLKTSKTKV 136 (438)
T ss_dssp HHHHH--HHHHHHHHHHHHTCSEEEEEHHHHSCCCSSHHHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred HHHHh--hHHHHHHHHHHcCCCEEEeccccccccccchhhhhccHHHHHHHHHHHHHHhCCce
Confidence 33444 899999999999999999953322 11 1 122456777788889986
No 291
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=53.71 E-value=8.6 Score=35.02 Aligned_cols=85 Identities=16% Similarity=0.149 Sum_probs=51.2
Q ss_pred CCCCCCcc---hhHHHHHHHhhcccccEEEeeCccccccCh-------hHHHHHHHHHHhCCceecCc---cHHHHH-HH
Q 028948 32 PHYTLSSS---HNVLEDIFESMGQFVDGLKFSGGSHSLMPK-------PFIEEVVKRAHQHDVYVSTG---DWAEHL-IR 97 (201)
Q Consensus 32 kG~s~~~g---~~~l~DlLe~ag~yID~lKfg~GTs~l~p~-------~~L~eKI~l~~~~gV~v~~G---tlfE~a-l~ 97 (201)
-|+|+.++ .....++|+.|+.| +.|-=| ||.+.|+ +.+++.+++||++|..+..- ..|+.+ +.
T Consensus 29 LGiSvYp~~~~~~~~~~Yi~~a~~~--Gf~~IF-TSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s 105 (385)
T 1x7f_A 29 LGISLYPEHSTKEKDMAYISAAARH--GFSRIF-TCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGIS 105 (385)
T ss_dssp EEEEECGGGSCHHHHHHHHHHHHTT--TEEEEE-EEECCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------
T ss_pred eEEEEcCCCCCHHHHHHHHHHHHHC--CCCEEE-ccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCC
Confidence 36655533 33445788888775 333333 4555554 35888899999999876652 344443 22
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcc
Q 028948 98 NGPSAFKEYVEDCKQVGFDTIELNVGSL 125 (201)
Q Consensus 98 qg~~~~~eyl~~~k~lGFd~IEISdGti 125 (201)
-+ . +...+++|++.|-+..|+-
T Consensus 106 ~~--d----l~~f~~lGi~gLRLD~Gf~ 127 (385)
T 1x7f_A 106 YS--D----LSFFAELGADGIRLDVGFD 127 (385)
T ss_dssp CC--C----THHHHHHTCSEEEESSCCS
T ss_pred HH--H----HHHHHHcCCCEEEEcCCCC
Confidence 22 3 3456788999999999984
No 292
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=53.04 E-value=49 Score=28.09 Aligned_cols=100 Identities=10% Similarity=0.128 Sum_probs=63.8
Q ss_pred chhHHHHHHHhhcccccEEEee------------CccccccChhHHHHHHHHHHhC-CceecCc---cHHHHHHHhCCch
Q 028948 39 SHNVLEDIFESMGQFVDGLKFS------------GGSHSLMPKPFIEEVVKRAHQH-DVYVSTG---DWAEHLIRNGPSA 102 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg------------~GTs~l~p~~~L~eKI~l~~~~-gV~v~~G---tlfE~al~qg~~~ 102 (201)
.+..+.+..+.+-++.|.|-+- +|++.+-..+.+.+.|+-.++. +++|..- ||-+ .+.
T Consensus 69 ~~~~~~~aa~~a~~~~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~G~~~------~~~ 142 (318)
T 1vhn_A 69 EPNELSEAARILSEKYKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRLGWEK------NEV 142 (318)
T ss_dssp CHHHHHHHHHHHTTTCSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEESCSSS------CCH
T ss_pred CHHHHHHHHHHHHHhCCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecCCCCh------HHH
Confidence 3556666666666668888774 5667777788899999888774 5544431 3321 123
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccC---ChhHHHHHHHHHHHCCCeEc
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLEI---PEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~i---~~~~r~~lI~~~~~~Gf~v~ 147 (201)
+ ++.+.+.+.|.+.|.|+.++-.- +..++ ++|+.+++ ...|.
T Consensus 143 ~-~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~-~~i~~i~~-~ipVi 187 (318)
T 1vhn_A 143 E-EIYRILVEEGVDEVFIHTRTVVQSFTGRAEW-KALSVLEK-RIPTF 187 (318)
T ss_dssp H-HHHHHHHHTTCCEEEEESSCTTTTTSSCCCG-GGGGGSCC-SSCEE
T ss_pred H-HHHHHHHHhCCCEEEEcCCCccccCCCCcCH-HHHHHHHc-CCeEE
Confidence 3 88899999999999999876421 11222 45555555 44443
No 293
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=52.99 E-value=34 Score=30.01 Aligned_cols=46 Identities=24% Similarity=0.245 Sum_probs=38.4
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCC--hhHHHHHHHHHHH-CCCeEcc-cc
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLEIP--EETLLRYVRLVKS-AGLKAKP-KF 150 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~i~--~~~r~~lI~~~~~-~Gf~v~p-E~ 150 (201)
..+.++.+.+.|.|+|.|. |..+. .+.-.++++.+++ ..+-+.- |.
T Consensus 55 ~~~~~~~~~~sGtDai~VG--S~~vt~~~~~~~~~v~~ik~~~~lPvil~fP 104 (286)
T 3vk5_A 55 AVEKAAELTRLGFAAVLLA--STDYESFESHMEPYVAAVKAATPLPVVLHFP 104 (286)
T ss_dssp HHHHHHHHHHTTCSCEEEE--CSCCSSHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred HHHHHHHHHhcCCCEEEEc--cCCCCcchHHHHHHHHHHHHhCCCCEEEECC
Confidence 3446888889999999999 99999 9999999999999 6776655 44
No 294
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=52.98 E-value=53 Score=30.95 Aligned_cols=91 Identities=15% Similarity=0.171 Sum_probs=59.4
Q ss_pred HHHHHhhcccccEEEeeCccc------cccChhHHHHHHHHHHh--CCceecCccHHHHHHHhC---------C-chHHH
Q 028948 44 EDIFESMGQFVDGLKFSGGSH------SLMPKPFIEEVVKRAHQ--HDVYVSTGDWAEHLIRNG---------P-SAFKE 105 (201)
Q Consensus 44 ~DlLe~ag~yID~lKfg~GTs------~l~p~~~L~eKI~l~~~--~gV~v~~GtlfE~al~qg---------~-~~~~e 105 (201)
-+.|..+| +|.|=.|||.+ .+.+. =.+.++.+++ -++.+. .| .++ | +..+.
T Consensus 53 a~~L~~~G--v~~IE~G~patF~~~~rfl~~d--~~e~lr~l~~~~~~~~l~--~L-----~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 53 CADIDAAG--YWSVECWGGATYDSCIRFLNED--PWERLRTFRKLMPNSRLQ--ML-----LRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp HHHHHHTT--CSEEEEEETTHHHHHHHTSCCC--HHHHHHHHHHHCTTSCEE--EE-----ECGGGTTSSSCCCHHHHHH
T ss_pred HHHHHHcC--CCEEEeCcccccccchhccCCC--HHHHHHHHHHhCCCCEEE--EE-----eccccccCcccCcccccHH
Confidence 45555666 88999999876 22222 2333333333 133221 11 121 1 13788
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
+++.+.+.|.+.|-|.+.+-++ +.-...|+.+++.|.+|.
T Consensus 122 ~ve~a~~aGvd~vrIf~s~sd~--~ni~~~i~~ak~~G~~v~ 161 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAMNDP--RNMAHAMAAVKKAGKHAQ 161 (539)
T ss_dssp HHHHHHHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHhCCCCEEEEEEehhHH--HHHHHHHHHHHHCCCeEE
Confidence 9999999999999999888777 455689999999999873
No 295
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycosyl hydrolases family 18; 2.60A {Klebsiella pneumoniae subsp}
Probab=52.89 E-value=19 Score=31.77 Aligned_cols=48 Identities=21% Similarity=0.327 Sum_probs=31.4
Q ss_pred HHHHHHHHhC-CceecC--ccHH----HHHHHhCC----chHHHHHHHHHHcCCCEEEec
Q 028948 73 EEVVKRAHQH-DVYVST--GDWA----EHLIRNGP----SAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 73 ~eKI~l~~~~-gV~v~~--Gtlf----E~al~qg~----~~~~eyl~~~k~lGFd~IEIS 121 (201)
++..++-+++ +++|.. |||- ..++. .+ .-++.-++.+++.|||.|.|.
T Consensus 96 ~~~~~lk~~~p~lkvllsiGG~~s~~f~~~~~-~~~~r~~fi~si~~~~~~~gfDGiDiD 154 (420)
T 3qok_A 96 QKLPALRKQNPDLKVLLSVGGWGARGFSGAAA-TAESRAVFIRSAQKIIQQYGLDGIDLD 154 (420)
T ss_dssp TTHHHHHHHCTTCEEEEEEECTTCCCHHHHTS-SHHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhCCCCEEEEEECCCCCcchhhhhC-CHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 3355666666 887765 7763 33321 11 136667788899999999998
No 296
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=52.74 E-value=5.3 Score=31.93 Aligned_cols=48 Identities=19% Similarity=0.239 Sum_probs=22.0
Q ss_pred HHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 028948 72 IEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 72 L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEIS 121 (201)
.++..++++++|+++..|+=+...-.-+ .+++.++.++++||+..+|-
T Consensus 173 ~~~~~~~~~~~g~~~~~gSDaH~~~~~g--~~~~~~~~~~~~g~~~~~i~ 220 (245)
T 1m65_A 173 CREVAAAVRDAGGWVALGSDSHTAFTMG--EFEECLKILDAVDFPPERIL 220 (245)
T ss_dssp HHHHHHHHHHHTCCEEEECCBSSGGGTT--CCHHHHHHHHHTTCCGGGBG
T ss_pred hHHHHHHHHHcCCEEEEECCCCChHHHh--hHHHHHHHHHHCCCCeEEEE
Confidence 3444555555555554442111111122 45555555666666555544
No 297
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=52.61 E-value=22 Score=31.94 Aligned_cols=113 Identities=13% Similarity=0.213 Sum_probs=73.3
Q ss_pred chhHHHHHHHhhcccc--cEEEeeCcccccc-----Chh------------HHHHHHHHHHhCCceecC----c-c----
Q 028948 39 SHNVLEDIFESMGQFV--DGLKFSGGSHSLM-----PKP------------FIEEVVKRAHQHDVYVST----G-D---- 90 (201)
Q Consensus 39 g~~~l~DlLe~ag~yI--D~lKfg~GTs~l~-----p~~------------~L~eKI~l~~~~gV~v~~----G-t---- 90 (201)
....++.+|+.|-+.= =+|.++-|+...+ +.. ...-...++++++|+|.. | +
T Consensus 38 n~e~~~Avl~AAee~~sPvIlq~s~g~~~~~~g~~~~~~~~~~~~i~ga~~~~~~v~~~A~~~~VPVaLHlDHg~~~~~~ 117 (358)
T 1dos_A 38 GTDSINAVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYGVPVILHTDHCAKKLLP 117 (358)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECHHHHHHHHCTTSCCCSTTHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHHHhcCCCccccchhhhHHHhHHHHHHHHHHHHHHCCCCEEEECCCCCCccHH
Confidence 5566666766554321 1566666654433 110 234445677889999986 5 3
Q ss_pred HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHH----HHHHHHHHHCCCeEccccccccCCC
Q 028948 91 WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFNKS 157 (201)
Q Consensus 91 lfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r----~~lI~~~~~~Gf~v~pE~g~k~~~~ 157 (201)
|++.++.-+ ++|++.+-+.||+.|=|.--. +|.++= .+++++++..|.-|-.|+|.==+.+
T Consensus 118 ~i~~~i~a~----~~~~~~~~~~gFtSVMiDgS~--~p~eENI~~Tkevv~~ah~~gvsVEaELG~vGG~E 182 (358)
T 1dos_A 118 WIDGLLDAG----EKHFAATGKPLFSSHMIDLSE--ESLQENIEICSKYLERMSKIGMTLEIELGCTGGEE 182 (358)
T ss_dssp HHHHHHHHH----HHHHHHHSSCSCSEEEECCTT--SCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCCCC
T ss_pred HHHHHHHHH----HHHHHhcccCCCceEeecCCC--CCHHHHHHHHHHHHHHHHHcCCEEEEEeccccCcC
Confidence 466665543 678888888889999885443 454432 3678889999999999999764434
No 298
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=52.52 E-value=8.6 Score=33.66 Aligned_cols=74 Identities=16% Similarity=0.252 Sum_probs=45.2
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCc-------------ccCChhHHHHHHHHHHHC-CCeEcc--ccccccCCC--C---
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGS-------------LEIPEETLLRYVRLVKSA-GLKAKP--KFAVMFNKS--D--- 158 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGt-------------i~i~~~~r~~lI~~~~~~-Gf~v~p--E~g~k~~~~--d--- 158 (201)
|+.+.+..+.+++.|||.|||+-|+ +.-..+.-.++|+.+++. ++.|.. -.|...... +
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~ 148 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQ 148 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHH
Confidence 3466777777888899999999652 333445556677777764 555533 333332210 1
Q ss_pred -----cccccccccccEEEecccCc
Q 028948 159 -----IPSDRDRAFGAYVARAPRST 178 (201)
Q Consensus 159 -----l~ag~~~a~g~~Vi~E~Res 178 (201)
.++|.+ +|++.+|..
T Consensus 149 ~a~~l~~aG~d-----~I~V~~r~~ 168 (350)
T 3b0p_A 149 SVEAMAEAGVK-----VFVVHARSA 168 (350)
T ss_dssp HHHHHHHTTCC-----EEEEECSCB
T ss_pred HHHHHHHcCCC-----EEEEecCch
Confidence 124444 999999875
No 299
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=52.42 E-value=28 Score=30.05 Aligned_cols=49 Identities=8% Similarity=0.003 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc---------CC---hhHHHHHHHHHHHCCCeEcccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLE---------IP---EETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~---------i~---~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
..++.++.++++||++|-|+-..-. ++ .+...++|+.++++|++|...+
T Consensus 63 ~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vildl 123 (376)
T 3ayr_A 63 TTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILNL 123 (376)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEEC
T ss_pred CcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 4678899999999999999644321 22 2345678999999999996543
No 300
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=52.39 E-value=14 Score=30.30 Aligned_cols=80 Identities=18% Similarity=0.093 Sum_probs=58.4
Q ss_pred EEEeeCccccccChhHHHHHHHHHHhCCc-eecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH
Q 028948 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL 133 (201)
Q Consensus 56 ~lKfg~GTs~l~p~~~L~eKI~l~~~~gV-~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~ 133 (201)
+-|-.+.. ++..+ |. ++++++|| .+.- |-..++|+.+- .. .+.++||+++=++|.+-+.+.+...
T Consensus 121 i~K~~~sa--F~~t~-L~---~~L~~~gi~~lvi~G~~T~~CV~~T--a~-----~a~~~Gy~v~vv~Da~~~~~~~~h~ 187 (211)
T 3o94_A 121 MDKRHYSA--FSGTD-LD---IRLRERRVSTVILTGVLTDISVLHT--AI-----DAYNLGYDIEIVKPAVASIWPENHQ 187 (211)
T ss_dssp EEESSSSS--STTSS-HH---HHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSCHHHHH
T ss_pred EEecccCc--CCCch-HH---HHHHhCCCCeEEEEeeccChHHHHH--HH-----HHHHCCCEEEEechhhcCCCHHHHH
Confidence 55755433 33332 44 44566788 3443 76888888875 43 4568999999999999999999999
Q ss_pred HHHHHHHH-CCCeEcc
Q 028948 134 RYVRLVKS-AGLKAKP 148 (201)
Q Consensus 134 ~lI~~~~~-~Gf~v~p 148 (201)
..++.+++ .|-.+.+
T Consensus 188 ~aL~~m~~~~G~~i~t 203 (211)
T 3o94_A 188 FALGHFKNTLGAKLVD 203 (211)
T ss_dssp HHHHHHHHTSCCEEEC
T ss_pred HHHHHHHHHCCcEEec
Confidence 99999999 8887754
No 301
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=52.37 E-value=31 Score=28.40 Aligned_cols=106 Identities=16% Similarity=0.127 Sum_probs=64.2
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEIS 121 (201)
+.+.+++.- +|++=+. ++.+.+++.+++.++.+|++|+.+...- ... +..+.+.++|+|.|=++
T Consensus 93 ~i~~~~~aG---ad~I~l~--~~~~~~p~~l~~~i~~~~~~g~~v~~~v----------~t~-eea~~a~~~Gad~Ig~~ 156 (229)
T 3q58_A 93 DVDALAQAG---ADIIAFD--ASFRSRPVDIDSLLTRIRLHGLLAMADC----------STV-NEGISCHQKGIEFIGTT 156 (229)
T ss_dssp HHHHHHHHT---CSEEEEE--CCSSCCSSCHHHHHHHHHHTTCEEEEEC----------SSH-HHHHHHHHTTCSEEECT
T ss_pred HHHHHHHcC---CCEEEEC--ccccCChHHHHHHHHHHHHCCCEEEEec----------CCH-HHHHHHHhCCCCEEEec
Confidence 444444433 4555333 3344444679999999999999887651 011 22345678999999543
Q ss_pred C-Cccc---CChhHHHHHHHHHHHCCCeEccccccccCC---CCcccccc
Q 028948 122 V-GSLE---IPEETLLRYVRLVKSAGLKAKPKFAVMFNK---SDIPSDRD 164 (201)
Q Consensus 122 d-Gti~---i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~---~dl~ag~~ 164 (201)
. |... ....+ .++++++++.+..|..+=|+.... .-+++|++
T Consensus 157 ~~g~t~~~~~~~~~-~~li~~l~~~~ipvIA~GGI~t~~d~~~~~~~Gad 205 (229)
T 3q58_A 157 LSGYTGPITPVEPD-LAMVTQLSHAGCRVIAEGRYNTPALAANAIEHGAW 205 (229)
T ss_dssp TTTSSSSCCCSSCC-HHHHHHHHTTTCCEEEESSCCSHHHHHHHHHTTCS
T ss_pred CccCCCCCcCCCCC-HHHHHHHHHcCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 2 2211 11223 367777776688899998987543 33556666
No 302
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=52.22 E-value=23 Score=31.95 Aligned_cols=45 Identities=16% Similarity=0.299 Sum_probs=35.0
Q ss_pred HHHHHHHHHcCCCEEEec--------------CCcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 104 KEYVEDCKQVGFDTIELN--------------VGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEIS--------------dGti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
++.++.++++|+++|-|- .|. -+.+.-++++++|++.||+|...+
T Consensus 51 ~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~--~d~~~~~~~a~~Ak~~GLkVlldf 109 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGN--NDLEKAIQIGKRATANGMKLLADF 109 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTC--CCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred chHHHHHHHCCCCEEEEeeecCCcccccCccCCCC--CCHHHHHHHHHHHHHCCCEEEEEe
Confidence 456788899999999981 122 346777889999999999997764
No 303
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=52.20 E-value=36 Score=32.91 Aligned_cols=103 Identities=11% Similarity=0.177 Sum_probs=70.3
Q ss_pred cChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCCh----hHHHHHHHHHHHC
Q 028948 67 MPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPE----ETLLRYVRLVKSA 142 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~----~~r~~lI~~~~~~ 142 (201)
+|..-|++.++.+|+.||.+.. |.|..-... ..++.++.++++|.+.|-+. +++=+. +--.++++.|+++
T Consensus 344 ~p~~di~~l~~Ya~~kgV~i~l--w~~~~~~~~--~~~~~~~~~~~~Gv~gvK~D--f~~~~~Q~~v~~y~~i~~~aA~~ 417 (641)
T 3a24_A 344 VKEIDLKELVDYAASKNVGIIL--WAGYHAFER--DMENVCRHYAEMGVKGFKVD--FMDRDDQEMTAFNYRAAEMCAKY 417 (641)
T ss_dssp CTTCCHHHHHHHHHHTTCEEEE--EEEHHHHHT--SHHHHHHHHHHHTCCEEEEE--CCCCCSHHHHHHHHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHhcCCEEEE--EeeCcchHH--HHHHHHHHHHHcCCCEEEEC--CCCCCcHHHHHHHHHHHHHHHHc
Confidence 3444588888888888886654 111111233 68999999999999999884 332222 2345678888889
Q ss_pred CCeEccccccccCCCCcccccccccccEEEecc-cCcCee
Q 028948 143 GLKAKPKFAVMFNKSDIPSDRDRAFGAYVARAP-RSTDKL 181 (201)
Q Consensus 143 Gf~v~pE~g~k~~~~dl~ag~~~a~g~~Vi~E~-Res~~v 181 (201)
++.| .+.....+.|=.|.+..++--|+ |-++..
T Consensus 418 ~l~V------~fHg~~~P~Gl~RTyPN~~t~EgvrG~E~~ 451 (641)
T 3a24_A 418 KLIL------DLHGTHKPAGLNRTYPNVLNFEGVNGLEQM 451 (641)
T ss_dssp TCEE------EECSCCCCTTHHHHCTTEEEECCSCCGGGG
T ss_pred CCEE------EcCCCcCCCcccccccchhhhhhhceeeec
Confidence 8775 44567778887777887888887 555543
No 304
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=52.17 E-value=24 Score=32.77 Aligned_cols=27 Identities=11% Similarity=0.297 Sum_probs=24.1
Q ss_pred cCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 126 EIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 126 ~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
-.+.++-.++++.|+++|..|.||+-.
T Consensus 216 ~YT~~di~eiv~yA~~rgI~VIPEID~ 242 (507)
T 1now_A 216 VYTPNDVRMVIEYARLRGIRVLPEFDT 242 (507)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEccCC
Confidence 468899999999999999999999854
No 305
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=51.66 E-value=16 Score=30.56 Aligned_cols=45 Identities=11% Similarity=0.091 Sum_probs=24.6
Q ss_pred HHHHHHHHHcCCCEEEecCCcc---------cCCh---hHHHHHHHHHHHCCCeEcc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSL---------EIPE---ETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti---------~i~~---~~r~~lI~~~~~~Gf~v~p 148 (201)
++-++.++++||++|-|+-.-- .+.+ +...++|+.++++|++|..
T Consensus 34 ~~di~~~~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vil 90 (305)
T 1h1n_A 34 PNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVV 90 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHCCCCEEEecccHHHcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEE
Confidence 5566666777777776642211 1112 2234566677777777643
No 306
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=51.43 E-value=15 Score=31.18 Aligned_cols=67 Identities=13% Similarity=0.114 Sum_probs=51.8
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccccccc-CCCCccc-ccccccccEEEecccCcCe
Q 028948 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMF-NKSDIPS-DRDRAFGAYVARAPRSTDK 180 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~-~~~dl~a-g~~~a~g~~Vi~E~Res~~ 180 (201)
+.+++..|-|+|=+.-. .++.++..++++.+++.|+.+..|+.-.. ...-+.+ |++ .|-++.|+-.+
T Consensus 116 i~ea~~~GAD~ilLi~a--~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~-----iIGinnr~l~t 184 (251)
T 1i4n_A 116 VKLASSVGADAILIIAR--ILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPK-----IIGINTRDLDT 184 (251)
T ss_dssp HHHHHHTTCSEEEEEGG--GSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCS-----EEEEECBCTTT
T ss_pred HHHHHHcCCCEEEEecc--cCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCC-----EEEEeCccccc
Confidence 45599999999998877 36778999999999999999999886332 2233555 777 88888887544
No 307
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=51.29 E-value=92 Score=27.02 Aligned_cols=99 Identities=18% Similarity=0.160 Sum_probs=67.2
Q ss_pred HHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHh----CCceecCcc----HHHHHHH--hCCc------------
Q 028948 44 EDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ----HDVYVSTGD----WAEHLIR--NGPS------------ 101 (201)
Q Consensus 44 ~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~----~gV~v~~Gt----lfE~al~--qg~~------------ 101 (201)
+.+++.-+++|| +|.|...+-.++.+++.+...+. .+++++--| -+|.++. +|.+
T Consensus 44 ~~~v~~GAdiID---Ig~g~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~iINdIs~~~~d~ 120 (300)
T 3k13_A 44 RQQVEDGALVID---VNMDDGLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKSIVNSISLKEGEE 120 (300)
T ss_dssp HHHHHTTCSEEE---EECCCTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCCEEEEECSTTCHH
T ss_pred HHHHHCCCCEEE---ECCCCCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCCEEEeCCcccCCh
Confidence 344555556666 58888888777889999998873 589998764 6888998 5531
Q ss_pred hHHHHHHHHHHcCCCEEEecC--CcccCChhHHH----HHHHHH-HHCCCe
Q 028948 102 AFKEYVEDCKQVGFDTIELNV--GSLEIPEETLL----RYVRLV-KSAGLK 145 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISd--Gti~i~~~~r~----~lI~~~-~~~Gf~ 145 (201)
++++.+..++++|..+|=.-. .-+.-+.++|. ++.+.+ .+.|+.
T Consensus 121 ~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~ 171 (300)
T 3k13_A 121 VFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFN 171 (300)
T ss_dssp HHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCC
Confidence 456899999999998887653 11222334443 344443 678884
No 308
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=51.27 E-value=9.3 Score=30.85 Aligned_cols=65 Identities=18% Similarity=0.097 Sum_probs=52.0
Q ss_pred HHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 77 KRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 77 ~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
++++++|| .+. .|-..++|+.+- .. .+.++||+++=++|.+-+.+++.....++..+..|-.+.+
T Consensus 98 ~~L~~~gi~~lvi~Gv~T~~CV~~T--a~-----dA~~~Gy~V~vv~Da~as~~~~~h~~al~~m~~~g~~v~~ 164 (208)
T 1yac_A 98 KAVKATGKKQLIIAGVVTEVCVAFP--AL-----SAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMT 164 (208)
T ss_dssp HHHHHTTCSEEEEEEBSCCCCCHHH--HH-----HHHHTTCEEEEETTSCBCSSHHHHHHHHHHHHHHTCEEEC
T ss_pred HHHHhcCCCEEEEEEeccchhHHHH--HH-----HHHHCCCEEEEECcccCCCCHHHHHHHHHHHHHcCCEEee
Confidence 45677888 344 477778877774 33 3567899999999999999999999999999999988754
No 309
>3r89_A Orotidine 5'-phosphate decarboxylase; PSI-biology, midwest center for structural genomics, MCSG, O 5-phosphate decarboxylase, lyase; 1.84A {Anaerococcus prevotii}
Probab=50.91 E-value=12 Score=32.65 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=52.8
Q ss_pred HHHHHHhhcccccEEEeeCccccccChhH---HHHHHHHHHhCCceecCc-cHHHHHHHhCCchHHHHHHHHHH--cCCC
Q 028948 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPF---IEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQ--VGFD 116 (201)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs~l~p~~~---L~eKI~l~~~~gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~--lGFd 116 (201)
...+++..++|+.++|+|+--..-+..+. |++.+++++++|..|..- =+..+ |+-+..|.+.+-+ +|+|
T Consensus 49 ~~~ivd~l~~~v~~~Kvg~~lf~~~G~~~v~~L~~~i~~~~~~g~~VflDlK~~DI-----pnTv~~~a~~~~~~~lg~D 123 (290)
T 3r89_A 49 NKEIIDQTYDVCAIYKLQIAYYESYGIEGMIAYRDTLSYLREKDLLSIGDVKRSDI-----AASAKMYAKAHFEGDFETD 123 (290)
T ss_dssp HHHHHHHHTTSCSEEEEEHHHHHTTHHHHHHHHHHHHHHHHHTTCCEEEEEEECCC-----HHHHHHHHHHHHSGGGCCS
T ss_pred HHHHHHHhCCcceEEEecHHHHHhcCHHHHHHHHHHHHHHHHCCCeEEEEecccCc-----HHHHHHHHHHHhccccCCC
Confidence 48899999999999999987666555553 556789999999888763 22222 1234456655444 8999
Q ss_pred EEEec
Q 028948 117 TIELN 121 (201)
Q Consensus 117 ~IEIS 121 (201)
+|-|+
T Consensus 124 ~vTvh 128 (290)
T 3r89_A 124 FITLN 128 (290)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99885
No 310
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=50.65 E-value=56 Score=25.98 Aligned_cols=88 Identities=24% Similarity=0.233 Sum_probs=52.3
Q ss_pred HHHHHHHHHHcCCCEEEecCC--cccCChhHHHHHHHHHHHCCCeEccccccccCC---CCcccccccccccEEEecccC
Q 028948 103 FKEYVEDCKQVGFDTIELNVG--SLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK---SDIPSDRDRAFGAYVARAPRS 177 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdG--ti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~---~dl~ag~~~a~g~~Vi~E~Re 177 (201)
-++|++.|.+.|.|.|=+-.. .. ++..++++.+++.|+++..-+.-.... ..+..+++ ||..-+..
T Consensus 80 ~~~~v~~~~~~Gad~v~vh~~~~~~----~~~~~~~~~~~~~g~~ig~~~~p~t~~e~~~~~~~~~d-----~vl~~~~~ 150 (230)
T 1rpx_A 80 PDQRVPDFIKAGADIVSVHCEQSST----IHLHRTINQIKSLGAKAGVVLNPGTPLTAIEYVLDAVD-----LVLIMSVN 150 (230)
T ss_dssp HHHHHHHHHHTTCSEEEEECSTTTC----SCHHHHHHHHHHTTSEEEEEECTTCCGGGGTTTTTTCS-----EEEEESSC
T ss_pred HHHHHHHHHHcCCCEEEEEecCccc----hhHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHhhCC-----EEEEEEEc
Confidence 457999999999999988776 33 233577888888887763333211111 22334566 88544444
Q ss_pred cC---eeccc-------------c----CCceeeeecccccc
Q 028948 178 TD---KLFLA-------------S----NPEIEVGVGINKSR 199 (201)
Q Consensus 178 s~---~v~~~-------------~----~~~~~~~~~~~~~~ 199 (201)
.| ..+.. . +.-|.|+-|||...
T Consensus 151 pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n 192 (230)
T 1rpx_A 151 PGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKN 192 (230)
T ss_dssp TTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTT
T ss_pred CCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHH
Confidence 32 22221 0 45577888888654
No 311
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=50.17 E-value=20 Score=30.16 Aligned_cols=70 Identities=23% Similarity=0.330 Sum_probs=42.0
Q ss_pred cChhHHHHHHHHHHhCCc-eecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCC
Q 028948 67 MPKPFIEEVVKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV-~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf 144 (201)
++.+.+.+.++.+.++|+ .++. ||- .-.+ + .+.+.+.++.+++.|+ .|.+|.|.+ ++ +.++++++.|+
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe-~p~~-~-~~~~~~li~~i~~~~~-~i~~s~g~l--~~----e~l~~L~~ag~ 153 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGE-DPYX-M-PDVISDIVKEIKKMGV-AVTLSLGEW--PR----EYYEKWKEAGA 153 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESC-CGGG-T-THHHHHHHHHHHTTSC-EEEEECCCC--CH----HHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCC-CCCc-c-HHHHHHHHHHHHhcCc-eEEEecCCC--CH----HHHHHHHHhCC
Confidence 455667777777888877 3333 432 0111 1 2378888888888864 556777764 22 34556666776
Q ss_pred eE
Q 028948 145 KA 146 (201)
Q Consensus 145 ~v 146 (201)
..
T Consensus 154 ~~ 155 (348)
T 3iix_A 154 DR 155 (348)
T ss_dssp CE
T ss_pred CE
Confidence 54
No 312
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=50.06 E-value=35 Score=28.04 Aligned_cols=17 Identities=12% Similarity=0.079 Sum_probs=14.6
Q ss_pred hHHHHHHHHHHcCCCEE
Q 028948 102 AFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~I 118 (201)
.+++.+++|++.|+-+|
T Consensus 80 ~ld~~v~~a~~~Gi~vi 96 (293)
T 1tvn_A 80 RLDTVVNAAIAEDMYVI 96 (293)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
Confidence 68888999999999876
No 313
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=49.95 E-value=25 Score=29.47 Aligned_cols=41 Identities=15% Similarity=0.142 Sum_probs=29.4
Q ss_pred hHHHHHHHHHHcCCC-EEEecCCcc------c--CChhHHHHHHHHHHHC
Q 028948 102 AFKEYVEDCKQVGFD-TIELNVGSL------E--IPEETLLRYVRLVKSA 142 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd-~IEISdGti------~--i~~~~r~~lI~~~~~~ 142 (201)
.+.+..+.+.+.||| .|||+-++= . -+.+...++|+.+++.
T Consensus 107 ~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~ 156 (311)
T 1jub_A 107 ENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF 156 (311)
T ss_dssp HHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh
Confidence 455666677788999 999975421 1 2566678899998876
No 314
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=49.23 E-value=23 Score=33.45 Aligned_cols=48 Identities=19% Similarity=0.324 Sum_probs=31.5
Q ss_pred chHHHHHHHHHHcCCCEEEec--------CCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 101 SAFKEYVEDCKQVGFDTIELN--------VGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEIS--------dGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
..+..-|+.+|++|++.|++. .|--.-.=.--.+|.+++++.|||+.+
T Consensus 33 ~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~l~~mv~~~GLKlq~ 88 (495)
T 1wdp_A 33 DGLKEQLLQLRAAGVDGVMVDVWWGIIELKGPKQYDWRAYRSLLQLVQECGLTLQA 88 (495)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEE
Confidence 456777777777787777764 233334444556777777777877733
No 315
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=49.04 E-value=73 Score=27.57 Aligned_cols=107 Identities=7% Similarity=0.068 Sum_probs=62.6
Q ss_pred chhHHHHHHHhhccc--ccEEEeeCccccccChh-HHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCC
Q 028948 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSLMPKP-FIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGF 115 (201)
Q Consensus 39 g~~~l~DlLe~ag~y--ID~lKfg~GTs~l~p~~-~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGF 115 (201)
....++.+|+.|-+. ==+|.++-|+...++-+ ...-...++++++|+|..= +-++ .. .+.+..|-+.||
T Consensus 27 n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValH------lDHg-~~-~e~i~~ai~~GF 98 (286)
T 1gvf_A 27 NAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALH------LDHH-ES-LDDIRRKVHAGV 98 (286)
T ss_dssp SHHHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEE------EEEE-CC-HHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEE------cCCC-CC-HHHHHHHHHcCC
Confidence 444555555544221 11456666665555422 3333445666777777651 0001 01 256667788999
Q ss_pred CEEEecCCcccCChhHH----HHHHHHHHHCCCeEccccccccC
Q 028948 116 DTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 116 d~IEISdGti~i~~~~r----~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
+.|=|.--.+ |.++= .++++.++..|.-|-.|+|.==+
T Consensus 99 tSVMiDgS~l--p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg 140 (286)
T 1gvf_A 99 RSAMIDGSHF--PFAENVKLVKSVVDFCHSQDCSVEAELGRLGG 140 (286)
T ss_dssp CEEEECCTTS--CHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-
T ss_pred CeEEECCCCC--CHHHHHHHHHHHHHHHHHcCCEEEEEEeeccC
Confidence 9998865544 44432 37788899999999999997544
No 316
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=48.52 E-value=33 Score=31.80 Aligned_cols=27 Identities=7% Similarity=0.240 Sum_probs=24.3
Q ss_pred cCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 126 EIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 126 ~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
-.+.++-.++++.|+++|..|.||+-.
T Consensus 211 ~YT~~di~eiv~yA~~rgI~VIPEID~ 237 (507)
T 2gjx_A 211 IYTAQDVKEVIEYARLRGIRVLAEFDT 237 (507)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred CcCHHHHHHHHHHHHHcCCEEEECCCC
Confidence 478899999999999999999999754
No 317
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=48.45 E-value=28 Score=30.32 Aligned_cols=111 Identities=16% Similarity=0.159 Sum_probs=67.2
Q ss_pred hhHHHHHHHhhccc-ccEEEee------------CccccccChhHHHHHHHHHHh-CCceecC--c-cHHHHHHHhCCch
Q 028948 40 HNVLEDIFESMGQF-VDGLKFS------------GGSHSLMPKPFIEEVVKRAHQ-HDVYVST--G-DWAEHLIRNGPSA 102 (201)
Q Consensus 40 ~~~l~DlLe~ag~y-ID~lKfg------------~GTs~l~p~~~L~eKI~l~~~-~gV~v~~--G-tlfE~al~qg~~~ 102 (201)
+..+.+..+.+-++ .|+|=+. +|++.+-..+.+.+.|+-.++ .+++|.. - +|-+. .....
T Consensus 69 p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~---~~~~~ 145 (350)
T 3b0p_A 69 PKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGK---ETYRG 145 (350)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTC---CCHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCcc---ccHHH
Confidence 34455444444333 5666554 567777788889999988887 3665544 1 23221 00013
Q ss_pred HHHHHHHHHHcCCCEEEecCCccc----------CChhHHHHHHHHHHHC--CCeEcccccccc
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLE----------IPEETLLRYVRLVKSA--GLKAKPKFAVMF 154 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~----------i~~~~r~~lI~~~~~~--Gf~v~pE~g~k~ 154 (201)
..++.+.+.+.|.++|-|+.++-. ++.-+ ..+|+.+++. ...|..-=|+..
T Consensus 146 ~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~-~~~i~~ik~~~~~iPVianGgI~s 208 (350)
T 3b0p_A 146 LAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLR-HDWVHRLKGDFPQLTFVTNGGIRS 208 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCBC----------CCCCC-HHHHHHHHHHCTTSEEEEESSCCS
T ss_pred HHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCccc-HHHHHHHHHhCCCCeEEEECCcCC
Confidence 567788899999999999987642 11112 3677777765 455555445443
No 318
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=48.38 E-value=93 Score=24.06 Aligned_cols=99 Identities=18% Similarity=0.185 Sum_probs=0.0
Q ss_pred hhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCc--cHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 028948 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (201)
Q Consensus 40 ~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G--tlfE~al~qg~~~~~eyl~~~k~lGFd~ 117 (201)
+.+.+..++.-.+|| ++.+.. .+-++.+|++|+++.+| |--| +..+.++|.+.
T Consensus 73 ~~~~~~a~~~Gad~i----v~~~~~--------~~~~~~~~~~g~~vi~g~~t~~e-------------~~~a~~~Gad~ 127 (205)
T 1wa3_A 73 VEQCRKAVESGAEFI----VSPHLD--------EEISQFCKEKGVFYMPGVMTPTE-------------LVKAMKLGHTI 127 (205)
T ss_dssp HHHHHHHHHHTCSEE----ECSSCC--------HHHHHHHHHHTCEEECEECSHHH-------------HHHHHHTTCCE
T ss_pred HHHHHHHHHcCCCEE----EcCCCC--------HHHHHHHHHcCCcEECCcCCHHH-------------HHHHHHcCCCE
Q ss_pred EEecCCcccCChhHHHHHHHHHHHC--CCeEccccccccCC--CCcccccccccccEEEe
Q 028948 118 IELNVGSLEIPEETLLRYVRLVKSA--GLKAKPKFAVMFNK--SDIPSDRDRAFGAYVAR 173 (201)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~--Gf~v~pE~g~k~~~--~dl~ag~~~a~g~~Vi~ 173 (201)
|-+.. ......+.++.+++. ...+.+.=|+...+ .-+.+|++ .|.+
T Consensus 128 vk~~~-----~~~~g~~~~~~l~~~~~~~pvia~GGI~~~~~~~~~~~Ga~-----~v~v 177 (205)
T 1wa3_A 128 LKLFP-----GEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVL-----AVGV 177 (205)
T ss_dssp EEETT-----HHHHHHHHHHHHHTTCTTCEEEEBSSCCTTTHHHHHHHTCS-----CEEE
T ss_pred EEEcC-----ccccCHHHHHHHHHhCCCCcEEEcCCCCHHHHHHHHHCCCC-----EEEE
No 319
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A*
Probab=48.29 E-value=22 Score=31.83 Aligned_cols=49 Identities=10% Similarity=-0.031 Sum_probs=37.9
Q ss_pred hhHHHHHHHhhcccccEEEeeCccccccChhH---HHHHHHHHHhCCceecC
Q 028948 40 HNVLEDIFESMGQFVDGLKFSGGSHSLMPKPF---IEEVVKRAHQHDVYVST 88 (201)
Q Consensus 40 ~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~---L~eKI~l~~~~gV~v~~ 88 (201)
.++.+.+++..++|++++|.|..-..-+-.+. |++.|+.++++|..|..
T Consensus 115 ~~f~~~ivdal~~~v~~vKvg~~lfea~G~~gi~~L~~~v~~lr~~g~~Vfl 166 (353)
T 2ffc_A 115 NHFCFYIINETKEYALAYKMNFAFYLPYGSLGVDVLKNVFDYLHHLNVPTIL 166 (353)
T ss_dssp HHHHHHHHHHHGGGCSEEEEEGGGGSTTTHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhccccceeeccHHHHHhcCHHHHHHHHHHHHHHHHcCCcEEE
Confidence 35668899999999999999986655554443 67778999998887764
No 320
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=48.24 E-value=20 Score=31.88 Aligned_cols=47 Identities=15% Similarity=0.286 Sum_probs=34.8
Q ss_pred HHHHHHHHHcCCCEEEecCCccc------------CChhHHHHHHHHHHHCCCeEcccc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLE------------IPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~------------i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
++-++.++++||++|-|.-+.-. -..+...++|+.++++|++|...+
T Consensus 76 e~d~~~i~~~G~N~VRipi~~~~~~~~~~~py~~~~~l~~ld~vv~~a~~~Gi~VilDl 134 (408)
T 1h4p_A 76 EQDFANIASQGFNLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDL 134 (408)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCCEEEccCCHHHcccCCCCCCccccHHHHHHHHHHHHHHCCCEEEEEC
Confidence 77889999999999999432111 123455789999999999996543
No 321
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=48.16 E-value=20 Score=32.15 Aligned_cols=47 Identities=6% Similarity=0.218 Sum_probs=36.5
Q ss_pred HHHHHHHHHcCCCEEEecCCcccC-----------ChhHHHHHHHHHHHCCCeEcccc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEI-----------PEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i-----------~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
++-++.++++||++|-|.-+.-.+ ..+...++|+.|+++|++|...+
T Consensus 76 e~D~~~ik~~G~N~VRipi~~~~~~~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 76 EQDFKQISNLGLNFVRIPIGYWAFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHHHHTTCCEEEEEEEGGGTCCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEcccHHHccCCCCCccchhHHHHHHHHHHHHHHCCCEEEEEe
Confidence 678999999999999997653222 23566789999999999996653
No 322
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=48.08 E-value=20 Score=30.58 Aligned_cols=52 Identities=6% Similarity=0.138 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCCCEEEecCCccc--------CChhH----HHHHHHHHHHCCCeEccccccccC
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLE--------IPEET----LLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~--------i~~~~----r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
.+.++.+.+.|++.|-|.+.+-+ ++.++ -.+.|+.+++.|..|..+++.-+.
T Consensus 86 ~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~ 149 (302)
T 2ftp_A 86 LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLG 149 (302)
T ss_dssp HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTC
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEee
Confidence 46788888999999999877744 34333 357789999999999766665544
No 323
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=47.97 E-value=23 Score=33.41 Aligned_cols=49 Identities=20% Similarity=0.304 Sum_probs=34.7
Q ss_pred CchHHHHHHHHHHcCCCEEEec--------CCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 100 PSAFKEYVEDCKQVGFDTIELN--------VGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEIS--------dGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
+..+..-|+.+|++|++.|++. .|--.-.=.--.+|.+++++.|||+.+
T Consensus 33 ~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mv~~~GLKlq~ 89 (498)
T 1fa2_A 33 KEKVEDELKQVKAGGCDGVMVDVWWGIIEAKGPKQYDWSAYRELFQLVKKCGLKIQA 89 (498)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEEHHHHTCSBTTBCCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEEE
Confidence 3467888888888888888875 233344445567788888888888843
No 324
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A {Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1 PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A* 1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A* 1ogb_A 1ogg_A* 1e6z_A* 1ur9_A*
Probab=47.90 E-value=57 Score=29.72 Aligned_cols=52 Identities=15% Similarity=0.273 Sum_probs=32.3
Q ss_pred HHHHHHHHHHh-CCceecC--ccHHHH--------HHH---hCC----chHHHHHHHHHHcCCCEEEecC
Q 028948 71 FIEEVVKRAHQ-HDVYVST--GDWAEH--------LIR---NGP----SAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 71 ~L~eKI~l~~~-~gV~v~~--GtlfE~--------al~---qg~----~~~~eyl~~~k~lGFd~IEISd 122 (201)
.+++..++-++ .+++|.+ |||-.. .+. .++ .-++..++.+++.|||.|.|.=
T Consensus 74 ~~~~l~~lk~~~p~lKvllSiGGw~~s~~~~~~~~~f~~~~~~~~~r~~fi~siv~~~~~~gfDGiDiDw 143 (499)
T 1goi_A 74 VVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKFAQSCVRIMKDYGFDGVNIDW 143 (499)
T ss_dssp HHHHHHHGGGGCTTCEEEEEEECHHHHSTTSTTHHHHHHHTSSHHHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHhCCCCeEEEEECCCCCCCCcccccchhhHhhCCHHHHHHHHHHHHHHHHHcCCCeEEEec
Confidence 35555554333 3787765 888532 111 111 1467778889999999999983
No 325
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=47.86 E-value=28 Score=29.65 Aligned_cols=85 Identities=12% Similarity=0.146 Sum_probs=52.5
Q ss_pred ChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHHCCC
Q 028948 68 PKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 68 p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGt---i~i~~~~r~~lI~~~~~~Gf 144 (201)
+.+.+++.++.+|++|+.+-. |. + ..++ ++.+.++|.+.|=|++-. ...+.+.-.++.+.+. .+.
T Consensus 147 ~~~~l~~l~~~a~~lGl~~lv----ev---~---t~ee-~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~-~~~ 214 (272)
T 3qja_A 147 EQSVLVSMLDRTESLGMTALV----EV---H---TEQE-ADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLP-SSV 214 (272)
T ss_dssp CHHHHHHHHHHHHHTTCEEEE----EE---S---SHHH-HHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGGSC-TTS
T ss_pred CHHHHHHHHHHHHHCCCcEEE----Ec---C---CHHH-HHHHHHCCCCEEEECCCcccccccCHHHHHHHHHhCc-ccC
Confidence 455688999999999887632 21 1 3344 455667899999998633 3444444434433221 268
Q ss_pred eEccccccccCC---CCcccccc
Q 028948 145 KAKPKFAVMFNK---SDIPSDRD 164 (201)
Q Consensus 145 ~v~pE~g~k~~~---~dl~ag~~ 164 (201)
.+..|-|++... .-.++|++
T Consensus 215 pvVaegGI~t~edv~~l~~~Gad 237 (272)
T 3qja_A 215 IRIAESGVRGTADLLAYAGAGAD 237 (272)
T ss_dssp EEEEESCCCSHHHHHHHHHTTCS
T ss_pred EEEEECCCCCHHHHHHHHHcCCC
Confidence 889999998442 22445555
No 326
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 1.75A {Lactococcus lactis subsp}
Probab=47.79 E-value=16 Score=31.48 Aligned_cols=52 Identities=13% Similarity=0.261 Sum_probs=37.0
Q ss_pred hhHHHHHHHHHHhCCceecC--ccHHHHH-----HHhCCchHHHHHHHHHHcCCCEEEecC
Q 028948 69 KPFIEEVVKRAHQHDVYVST--GDWAEHL-----IRNGPSAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 69 ~~~L~eKI~l~~~~gV~v~~--GtlfE~a-----l~qg~~~~~eyl~~~k~lGFd~IEISd 122 (201)
...+.+.|..+|+.|++|.. |||-... -++. -++..++.+++.|||.|.|.=
T Consensus 65 ~~~~~~~i~~~k~~g~kvllsiGG~~~~~~~~~~~r~~--f~~~~~~~~~~~g~DGiDiD~ 123 (321)
T 3ian_A 65 DTEFRAEISKLNAEGKSVLIALGGADAHIELKKSQESD--FVNEIIRLVDTYGFDGLDIDL 123 (321)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEETTCCCCCCGGGHHH--HHHHHHHHHHHHCCCEEEEEE
T ss_pred chhHHHHHHHHHHCCCEEEEEeccCCCCcccChHHHHH--HHHHHHHHHHHhCCCeEEEec
Confidence 34588899999999998876 7663211 1111 356677889999999999863
No 327
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=47.65 E-value=25 Score=30.25 Aligned_cols=76 Identities=22% Similarity=0.277 Sum_probs=51.2
Q ss_pred cChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCC--h----hHHHHH---HH
Q 028948 67 MPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP--E----ETLLRY---VR 137 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~--~----~~r~~l---I~ 137 (201)
-..+.|++.|+-+|++||.||. -=+ --.+-++.++++|-++||+-.|..-=. . .+..++ .+
T Consensus 111 ~~~~~l~~~i~~L~~~GIrVSL--------FID--pd~~qi~aA~~~GA~~IELhTG~Ya~a~~~~~~~~el~~i~~aa~ 180 (243)
T 1m5w_A 111 GQRDKMRDACKRLADAGIQVSL--------FID--ADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAAT 180 (243)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEE--------EEC--SCHHHHHHHHHTTCSEEEEECHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHCCCEEEE--------EeC--CCHHHHHHHHHhCcCEEEEechhhhcCCCchhHHHHHHHHHHHHH
Confidence 3456799999999999999985 111 113456778999999999998866322 1 122333 35
Q ss_pred HHHHCCCeEcccccc
Q 028948 138 LVKSAGLKAKPKFAV 152 (201)
Q Consensus 138 ~~~~~Gf~v~pE~g~ 152 (201)
.+++.||.|..-=|.
T Consensus 181 ~A~~lGL~VnAGHgL 195 (243)
T 1m5w_A 181 FAASLGLKVNAGHGL 195 (243)
T ss_dssp HHHHTTCEEEEESSC
T ss_pred HHHHcCCEEecCCCC
Confidence 677889998553333
No 328
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=47.54 E-value=16 Score=29.89 Aligned_cols=65 Identities=14% Similarity=0.155 Sum_probs=51.6
Q ss_pred HHHHhCCc-eecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCC-hhHHHHHHHHHHHCCCeEcc
Q 028948 77 KRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIP-EETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 77 ~l~~~~gV-~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~-~~~r~~lI~~~~~~Gf~v~p 148 (201)
++++++|| .+.- |--.++|+.+- ..+ +.++||+++=++|.+-+.+ ++.....++.++..|-.|.+
T Consensus 160 ~~L~~~gi~~lvv~G~~T~~CV~~T--a~d-----A~~~Gy~V~Vv~Da~as~~~~~~~~~aL~~m~~~g~~v~t 227 (235)
T 2wt9_A 160 GYLKERGIDTVYVVGIATDFCVAWT--ALD-----AVKQGFKTLVIEDACKGIDLNGSLEQAWQTMQQQGVVRIQ 227 (235)
T ss_dssp HHHHHTTCCEEEEEEECTTTHHHHH--HHH-----HHHTTCEEEEEEEEEECCCSTTHHHHHHHHHHHTTCEEEC
T ss_pred HHHHHCCCCEEEEEEeCccHHHHHH--HHH-----HHhCCCEEEEechhccCCChhHHHHHHHHHHHHcCCEEEE
Confidence 34567899 4444 77888888875 333 5688999999999999999 88888899999999888753
No 329
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=47.43 E-value=28 Score=29.52 Aligned_cols=46 Identities=7% Similarity=-0.041 Sum_probs=21.9
Q ss_pred HHHHHHHHHhCCceecCc-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEe
Q 028948 72 IEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (201)
Q Consensus 72 L~eKI~l~~~~gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IEI 120 (201)
+.+-|+.++++|+.+... ++.- ..+.+.++++++.++++|++.|++
T Consensus 225 ~~~~i~~l~~~g~~v~i~~~l~~---g~n~~~~~~l~~~l~~~~~~~i~l 271 (342)
T 2yx0_A 225 ILRFLELMRDLPTRTVVRLTLVK---GENMHSPEKYAKLILKARPMFVEA 271 (342)
T ss_dssp HHHHHHHHTTCSSEEEEEEEECT---TTTCCCHHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEEEC---CccHHHHHHHHHHHHHcCCCEEEE
Confidence 444455555555554443 2210 012223556666666666665554
No 330
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=47.11 E-value=43 Score=27.51 Aligned_cols=87 Identities=13% Similarity=0.187 Sum_probs=51.5
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCC---CCcccccccccccEEEecccC---
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNK---SDIPSDRDRAFGAYVARAPRS--- 177 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~---~dl~ag~~~a~g~~Vi~E~Re--- 177 (201)
++|++.+.+.|.|.|-|-.-+. ++-.++++.+++.|.++-.-+.-..+- .++-...| +|.+=..+
T Consensus 77 ~~~i~~~~~aGad~itvH~Ea~----~~~~~~i~~i~~~G~k~gval~p~t~~e~l~~~l~~~D-----~Vl~msv~pGf 147 (228)
T 3ovp_A 77 EQWVKPMAVAGANQYTFHLEAT----ENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQID-----MALVMTVEPGF 147 (228)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGC----SCHHHHHHHHHHTTCEEEEEECTTSCGGGTGGGGGGCS-----EEEEESSCTTT
T ss_pred HHHHHHHHHcCCCEEEEccCCc----hhHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHhccCC-----eEEEeeecCCC
Confidence 4688888999999999853221 245789999999998873222211111 12222345 66542222
Q ss_pred cCeeccc-------------cCCceeeeecccccc
Q 028948 178 TDKLFLA-------------SNPEIEVGVGINKSR 199 (201)
Q Consensus 178 s~~v~~~-------------~~~~~~~~~~~~~~~ 199 (201)
.|..|+. .|..|+|.-|||...
T Consensus 148 ~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~~t 182 (228)
T 3ovp_A 148 GGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGPDT 182 (228)
T ss_dssp CSCCCCGGGHHHHHHHHHHCTTCEEEEESSCSTTT
T ss_pred CCcccCHHHHHHHHHHHHhcCCCCEEEeCCcCHHH
Confidence 2322221 256799999998764
No 331
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A*
Probab=46.79 E-value=17 Score=32.67 Aligned_cols=50 Identities=8% Similarity=0.078 Sum_probs=34.8
Q ss_pred chHHHHH-HHHHHcCCCEEEecCCcc-------cCCh---hHHHHHHHHHHHCCCeEcccc
Q 028948 101 SAFKEYV-EDCKQVGFDTIELNVGSL-------EIPE---ETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 101 ~~~~eyl-~~~k~lGFd~IEISdGti-------~i~~---~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
...++-+ +.++++||++|-+.-.-- .++. +...++|+.++++|++|...+
T Consensus 65 ~~~~~di~~~l~~~G~N~VRl~v~w~~~~p~~g~~~~~~l~~l~~~v~~a~~~Gi~vildl 125 (481)
T 2osx_A 65 QFTEADLAREYADMGTNFVRFLISWRSVEPAPGVYDQQYLDRVEDRVGWYAERGYKVMLDM 125 (481)
T ss_dssp SCCHHHHHHHHHHHCCCEEEEEECHHHHCSBTTBCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cccHHHHHHHHHHCCCCEEEEeCcHHHcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 3566677 899999999999863211 1222 233457899999999997663
No 332
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides}
Probab=46.79 E-value=19 Score=31.79 Aligned_cols=49 Identities=12% Similarity=0.205 Sum_probs=33.3
Q ss_pred HHHHHHHHHcCCCEEEe-------------cCCcccCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 104 KEYVEDCKQVGFDTIEL-------------NVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEI-------------SdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
++....-+++||.+|-+ .+|...-+-...-++++.+++.|+++..+++-
T Consensus 45 ~~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y~~~~~D~~~d~~~~~G~~p~~~l~~ 106 (500)
T 4ekj_A 45 AQLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVYDWTKIDQLYDALLAKGIKPFIELGF 106 (500)
T ss_dssp HHHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEECCHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHhcCceEEEECCccccccceeecCCCCeecchHHHHHHHHHHHHCCCEEEEEEeC
Confidence 34444557788888765 23333333345568999999999999888864
No 333
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=46.77 E-value=16 Score=29.07 Aligned_cols=79 Identities=9% Similarity=0.001 Sum_probs=57.5
Q ss_pred EEEeeCccccccChhHHHHHHHHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH
Q 028948 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL 133 (201)
Q Consensus 56 ~lKfg~GTs~l~p~~~L~eKI~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~ 133 (201)
+-|-.+. +++..+ |. ++++++|| .+. .|-..++|+.+- .. .+.++||+++=++|.+-+.+.+...
T Consensus 120 i~K~~~s--aF~~t~-L~---~~L~~~gi~~lvi~G~~T~~CV~~T--a~-----dA~~~Gy~V~vv~Da~as~~~~~h~ 186 (207)
T 1nf9_A 120 LTKWRYS--AFFHSD-LL---QRMRAAGRDQLVLCGVYAHVGVLIS--TV-----DAYSNDIQPFLVADAIADFSEAHHR 186 (207)
T ss_dssp EECCSSS--TTTTSS-HH---HHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSSHHHHH
T ss_pred EecCCCC--CcCCCc-HH---HHHHHcCCCEEEEEeeecChHHHHH--HH-----HHHHCCCEEEEeCcccCCCCHHHHH
Confidence 4575543 344433 44 35567899 344 477888888774 33 3567999999999999999999999
Q ss_pred HHHHHHHHCCCeEc
Q 028948 134 RYVRLVKSAGLKAK 147 (201)
Q Consensus 134 ~lI~~~~~~Gf~v~ 147 (201)
..++..+..|-.|.
T Consensus 187 ~al~~~~~~~~~v~ 200 (207)
T 1nf9_A 187 MALEYAASRCAMVV 200 (207)
T ss_dssp HHHHHHHHHTCEEE
T ss_pred HHHHHHHHhCcEEc
Confidence 99998888776664
No 334
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp}
Probab=46.72 E-value=35 Score=29.87 Aligned_cols=93 Identities=12% Similarity=0.148 Sum_probs=54.1
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHh-CCceecCc-cHHHHHHHhCCchHHHHHHHHHHcCCC
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQ-HDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~-~gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd 116 (201)
.+....++++..+++++++|.|.--..-+..+.++ .+++ +|..+..- =+..+ |+-+..|.+.+.++|.|
T Consensus 35 ~~~eal~l~~~l~~~v~~vKVG~~lf~~~G~~~V~----~Lk~~~g~~IflDlKl~DI-----pnTv~~av~~~a~lGaD 105 (303)
T 3ru6_A 35 TKEECLQLAKELKNLDIWLKVGLRAYLRDGFKFIE----ELKKVDDFKIFLDLKFHDI-----PNTMADACEEVSKLGVD 105 (303)
T ss_dssp SHHHHHHHHHHTTTSSCEEEECHHHHHHHTHHHHH----HHHHHCCCEEEEEEEECSC-----HHHHHHHHHHHHTTTCS
T ss_pred CHHHHHHHHHHhCCCccEEEeCHHHHHHhCHHHHH----HHHHhhCCCEEEEeeeccC-----chhHHHHHHHHHhcCCC
Confidence 67788899999999999999974221112223333 3333 35555442 12111 22345566677888888
Q ss_pred EEEecCCcccCChhHHHHHHHHHHHCC
Q 028948 117 TIELNVGSLEIPEETLLRYVRLVKSAG 143 (201)
Q Consensus 117 ~IEISdGti~i~~~~r~~lI~~~~~~G 143 (201)
.|-|.- ....+....+++.+++.|
T Consensus 106 ~vTVHa---~~G~~~m~aa~e~a~~~~ 129 (303)
T 3ru6_A 106 MINIHA---SAGKIAIQEVMTRLSKFS 129 (303)
T ss_dssp EEEEEG---GGCHHHHHHHHHHHTTSS
T ss_pred EEEEec---cCCHHHHHHHHHHHHhcC
Confidence 888853 233455555666665544
No 335
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=46.66 E-value=30 Score=33.42 Aligned_cols=46 Identities=15% Similarity=0.303 Sum_probs=37.3
Q ss_pred CchHHHHHHHHHHcCCCEEEecCCcc------------------cCChhHHHHHHHHHHHCCCeE
Q 028948 100 PSAFKEYVEDCKQVGFDTIELNVGSL------------------EIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 100 ~~~~~eyl~~~k~lGFd~IEISdGti------------------~i~~~~r~~lI~~~~~~Gf~v 146 (201)
.+++.+..+.|+++|++.+=|+||=. ..|.. ...+++.+++.|||+
T Consensus 345 e~~i~~~ad~aa~lG~e~fviDDGWf~~r~~d~~~lGdW~~d~~kFP~G-lk~Lad~vh~~Gmkf 408 (729)
T 4fnq_A 345 EEKLVNIAKTEAELGIELFVLDDGWFGKRDDDRRSLGDWIVNRRKLPNG-LDGLAKQVNELGMQF 408 (729)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSCCBTTCCSTTSCTTCCSBCTTTCTTH-HHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHhcCccEEEEcceeecCCCCCcccCCcEEEChhhcCcc-HHHHHHHHHHCCCEE
Confidence 35788899999999999999999932 12332 468999999999998
No 336
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=46.52 E-value=37 Score=27.00 Aligned_cols=97 Identities=13% Similarity=0.015 Sum_probs=50.9
Q ss_pred hhHHHHHHHHHHhCCceecC----c-c--HHHHHHHhCCchHHHHH---HHHHHcCCCEEEecCCcccCChhHHHHHHHH
Q 028948 69 KPFIEEVVKRAHQHDVYVST----G-D--WAEHLIRNGPSAFKEYV---EDCKQVGFDTIELNVGSLEIPEETLLRYVRL 138 (201)
Q Consensus 69 ~~~L~eKI~l~~~~gV~v~~----G-t--lfE~al~qg~~~~~eyl---~~~k~lGFd~IEISdGti~i~~~~r~~lI~~ 138 (201)
.+.+++-++.++++|..+.. + | -.+.+...+ ..+..+ ....+.||+. + -++.+.+++
T Consensus 92 ~~~l~~~~~~~~~~g~~~~~~ll~~~t~~~~~~l~~~~--~~~~vl~~a~~~~~~G~~g----------~-~~~i~~lr~ 158 (216)
T 1q6o_A 92 INTAKGALDVAKEFNGDVQIELTGYWTWEQAQQWRDAG--IGQVVYHRSRDAQAAGVAW----------G-EADITAIKR 158 (216)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSCCCHHHHHHHHHTT--CCEEEEECCHHHHHTTCCC----------C-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCceeeeeeCCChhhHHHHHhcC--cHHHHHHHHHHHHhcCCCC----------C-HHHHHHHHH
Confidence 44588888889999887432 3 3 222221112 111111 2344556553 2 344566666
Q ss_pred HHHCCC--eEccccccccCCCCcccccccccccEEEecccCcCeeccccCC
Q 028948 139 VKSAGL--KAKPKFAVMFNKSDIPSDRDRAFGAYVARAPRSTDKLFLASNP 187 (201)
Q Consensus 139 ~~~~Gf--~v~pE~g~k~~~~dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~ 187 (201)
.....+ .|.+-++.+....-+++|++ ++++ +|. ++-++||
T Consensus 159 ~~~~~~~i~v~GGI~~~~~~~~~~aGad-----~ivv-G~~---I~~a~dp 200 (216)
T 1q6o_A 159 LSDMGFKVTVTGGLALEDLPLFKGIPIH-----VFIA-GRS---IRDAASP 200 (216)
T ss_dssp HHHTTCEEEEESSCCGGGGGGGTTSCCS-----EEEE-SHH---HHTSSCH
T ss_pred hcCCCCcEEEECCcChhhHHHHHHcCCC-----EEEE-eeh---hcCCCCH
Confidence 666566 45664554445556777777 5554 443 4455666
No 337
>2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A*
Probab=46.32 E-value=27 Score=35.56 Aligned_cols=20 Identities=20% Similarity=0.258 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHcCCCEEEec
Q 028948 102 AFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEIS 121 (201)
..-+||+++++||+++||++
T Consensus 458 ~~i~~L~~L~~lGvt~i~Ll 477 (1083)
T 2fhf_A 458 NMVQHLKQLSASGVTHIELL 477 (1083)
T ss_dssp HHHHHHHHHHHHTCCEEEES
T ss_pred hhHHHHHHHHhcCCCEEEEC
Confidence 45578999999999999987
No 338
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=46.29 E-value=29 Score=26.52 Aligned_cols=90 Identities=16% Similarity=0.368 Sum_probs=55.9
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHH-HHHhCCceec---Cc--cHHHHHHH---------------
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVK-RAHQHDVYVS---TG--DWAEHLIR--------------- 97 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~-l~~~~gV~v~---~G--tlfE~al~--------------- 97 (201)
.++-++|++...| |-.-.+-++..|++-|+ +.++|+..+. .. -|.|.|+.
T Consensus 14 tlrkfkdiikkng---------fkvrtvrspqelkdsieelvkkynativvvvvddkewaekairfvkslgaqvliiiyd 84 (134)
T 2l69_A 14 TLRKFKDIIKKNG---------FKVRTVRSPQELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYD 84 (134)
T ss_dssp HHHHHHHHHHHTT---------CEEEEECSHHHHHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEEEEC
T ss_pred HHHHHHHHHHhcC---------ceEEEecCHHHHHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEEEEe
Confidence 4556777777654 33334556666777774 6677876322 23 49998875
Q ss_pred hCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHC
Q 028948 98 NGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 98 qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~ 142 (201)
|+.+++++|-++.+..||..--+ .-|++-+..+-+..++-
T Consensus 85 qdqnrleefsrevrrrgfevrtv-----tspddfkkslerlirev 124 (134)
T 2l69_A 85 QDQNRLEEFSREVRRRGFEVRTV-----TSPDDFKKSLERLIREV 124 (134)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEE-----SSHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHhcCceEEEe-----cChHHHHHHHHHHHHHh
Confidence 33347899999999999987543 34555454444444443
No 339
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A*
Probab=46.24 E-value=38 Score=29.10 Aligned_cols=48 Identities=23% Similarity=0.346 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-C--------Ch---hHHHHHHHHHHHCCCeEccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLE-I--------PE---ETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~-i--------~~---~~r~~lI~~~~~~Gf~v~pE 149 (201)
..++-++.++++||++|-|.-..-. + .+ +...++|+.++++|++|...
T Consensus 70 ~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild 129 (395)
T 2jep_A 70 VTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIIN 129 (395)
T ss_dssp CCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEC
T ss_pred CcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 4788899999999999999765421 1 11 23567899999999999654
No 340
>3qm3_A Fructose-bisphosphate aldolase; structural genomics, center for structural genomics of infec diseases, csgid, TIM beta/alpha-barrel, lyase; 1.85A {Campylobacter jejuni} SCOP: c.1.10.2
Probab=46.22 E-value=27 Score=31.38 Aligned_cols=77 Identities=18% Similarity=0.216 Sum_probs=53.6
Q ss_pred HHHHHhCCceecC----c-c----HHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHCCC
Q 028948 76 VKRAHQHDVYVST----G-D----WAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGL 144 (201)
Q Consensus 76 I~l~~~~gV~v~~----G-t----lfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~--~r~~lI~~~~~~Gf 144 (201)
..++++++|+|.. | . |++.++.- .++|+..+-+.||+.|=|.--.+++.+- .=.+++++++..|.
T Consensus 92 ~~~A~~~~VPVaLHlDHg~~~~~~~i~~~i~a----~~~~~~~~~~~GFtSVMiDgS~lp~eENI~~Tk~vv~~ah~~gv 167 (357)
T 3qm3_A 92 HLLAKAYGVPVILHTDHAARKLLPWIDGLIEA----NAQYKKTHGQALFSSHMLDLSEESLEENLSTCEVYLQKLDALGV 167 (357)
T ss_dssp HHHHHHHTCEEEEEECCCCGGGHHHHHHHHHH----HHHHHHHHSSCSCSEEECCCTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCcEEEECCCCCccchHHHHHHHHH----hHHHHhhhcCCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 4678889999986 5 3 24444433 3678888889999999985554443321 22377888999999
Q ss_pred eEccccccccCC
Q 028948 145 KAKPKFAVMFNK 156 (201)
Q Consensus 145 ~v~pE~g~k~~~ 156 (201)
-|-.|+|.=-+.
T Consensus 168 sVEaELG~igG~ 179 (357)
T 3qm3_A 168 ALEIELGCTGGE 179 (357)
T ss_dssp EEEEECCCCCC-
T ss_pred eEEEEeeeeccc
Confidence 999999865443
No 341
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=46.05 E-value=42 Score=29.87 Aligned_cols=89 Identities=18% Similarity=0.153 Sum_probs=56.4
Q ss_pred cChhHHHHHHHHHHhCC---ceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEec--CCcccCChhHHHHHHHHHHH
Q 028948 67 MPKPFIEEVVKRAHQHD---VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN--VGSLEIPEETLLRYVRLVKS 141 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~g---V~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEIS--dGti~i~~~~r~~lI~~~~~ 141 (201)
++.+.+.+-|+..++.+ |-+..|. . ....+.++.+.+.|.+.|+|. .| +.+...+.|+.+++
T Consensus 79 ~s~e~~~~~i~~vk~~~~l~vga~vg~-------~--~~~~~~~~~lieaGvd~I~idta~G----~~~~~~~~I~~ik~ 145 (366)
T 4fo4_A 79 MSIEQQAAQVHQVKISGGLRVGAAVGA-------A--PGNEERVKALVEAGVDVLLIDSSHG----HSEGVLQRIRETRA 145 (366)
T ss_dssp SCHHHHHHHHHHHHTTTSCCCEEECCS-------C--TTCHHHHHHHHHTTCSEEEEECSCT----TSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCceeEEEEecc-------C--hhHHHHHHHHHhCCCCEEEEeCCCC----CCHHHHHHHHHHHH
Confidence 45566888888888764 2222231 1 246778899999999999993 34 23566778888888
Q ss_pred C--CCeEcc--ccccccCCCCcccccccccccEEEe
Q 028948 142 A--GLKAKP--KFAVMFNKSDIPSDRDRAFGAYVAR 173 (201)
Q Consensus 142 ~--Gf~v~p--E~g~k~~~~dl~ag~~~a~g~~Vi~ 173 (201)
. +..|.. -........-.++|+| +|.+
T Consensus 146 ~~p~v~Vi~G~v~t~e~A~~a~~aGAD-----~I~v 176 (366)
T 4fo4_A 146 AYPHLEIIGGNVATAEGARALIEAGVS-----AVKV 176 (366)
T ss_dssp HCTTCEEEEEEECSHHHHHHHHHHTCS-----EEEE
T ss_pred hcCCCceEeeeeCCHHHHHHHHHcCCC-----EEEE
Confidence 7 555543 0111112234567888 8887
No 342
>3hv8_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; HET: C2E; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 3hv9_A 4afy_A 4ag0_A
Probab=45.97 E-value=35 Score=27.69 Aligned_cols=91 Identities=8% Similarity=-0.056 Sum_probs=54.6
Q ss_pred ccccChhHHHHHHHHHHhCCceecC-c-cHHHHHHHhCCchHHHHHHHHHHcCC----------------------CEEE
Q 028948 64 HSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIRNGPSAFKEYVEDCKQVGF----------------------DTIE 119 (201)
Q Consensus 64 s~l~p~~~L~eKI~l~~~~gV~v~~-G-tlfE~al~qg~~~~~eyl~~~k~lGF----------------------d~IE 119 (201)
..|..++.+....++.+++++...- - -+-|.....+.+.+.+.++.++++|| |.|-
T Consensus 114 ~~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDDfG~g~ssl~~L~~l~~d~iK 193 (268)
T 3hv8_A 114 ASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFIK 193 (268)
T ss_dssp HHHTCTTHHHHHHHHHHHHTCCSSCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEETCSSSTTGGGGTCCCSEEE
T ss_pred HHhcCchHHHHHHHHHHHcCCChhhEEEEEEcHHHHhCHHHHHHHHHHHHHCCCEEEEeCCCCChHHHHHHHhCCCCEEE
Confidence 3456666677777777777764332 1 24466666554567777777777764 5555
Q ss_pred ecCCccc-CChh----HHHHHHHHHHHCCCeEccccccccC
Q 028948 120 LNVGSLE-IPEE----TLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 120 ISdGti~-i~~~----~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
|+-.++. +..+ .-..+|..+++.|.+|..| |+...
T Consensus 194 iD~~~v~~~~~~~~~~~l~~ii~~~~~~~~~viae-GVEt~ 233 (268)
T 3hv8_A 194 IDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVP-FVESA 233 (268)
T ss_dssp ECGGGGSSTTSHHHHHHHHHHHHHHHHTTCEEEEC-CCCSH
T ss_pred ECHHHHHhhhcChhHHHHHHHHHHHHHcCCCEEEE-eeCCH
Confidence 5544432 2222 2345677788888888777 66643
No 343
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=45.77 E-value=41 Score=27.67 Aligned_cols=106 Identities=14% Similarity=0.146 Sum_probs=64.5
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEIS 121 (201)
+.+.+++.- +|++=++ ++.+.+++.+++.++.+|++|+.+...- . . .+..+.+.++|+|.|=++
T Consensus 93 ~i~~~~~~G---ad~V~l~--~~~~~~p~~l~~~i~~~~~~g~~v~~~v-------~---t-~eea~~a~~~Gad~Ig~~ 156 (232)
T 3igs_A 93 DVDALAQAG---AAIIAVD--GTARQRPVAVEALLARIHHHHLLTMADC-------S---S-VDDGLACQRLGADIIGTT 156 (232)
T ss_dssp HHHHHHHHT---CSEEEEE--CCSSCCSSCHHHHHHHHHHTTCEEEEEC-------C---S-HHHHHHHHHTTCSEEECT
T ss_pred HHHHHHHcC---CCEEEEC--ccccCCHHHHHHHHHHHHHCCCEEEEeC-------C---C-HHHHHHHHhCCCCEEEEc
Confidence 444444433 5555443 3444444679999999999999887651 0 1 123455678999999543
Q ss_pred C-Cccc---CChhHHHHHHHHHHHCCCeEccccccccCC---CCcccccc
Q 028948 122 V-GSLE---IPEETLLRYVRLVKSAGLKAKPKFAVMFNK---SDIPSDRD 164 (201)
Q Consensus 122 d-Gti~---i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~---~dl~ag~~ 164 (201)
. |... ....+ .++++++++.+..|..+=|+.... .-+++|++
T Consensus 157 ~~g~t~~~~~~~~~-~~~i~~l~~~~ipvIA~GGI~t~~d~~~~~~~Gad 205 (232)
T 3igs_A 157 MSGYTTPDTPEEPD-LPLVKALHDAGCRVIAEGRYNSPALAAEAIRYGAW 205 (232)
T ss_dssp TTTSSSSSCCSSCC-HHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred CccCCCCCCCCCCC-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCC
Confidence 2 2211 11222 367777776688889998887543 33556666
No 344
>3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=45.75 E-value=14 Score=34.36 Aligned_cols=65 Identities=18% Similarity=0.224 Sum_probs=44.6
Q ss_pred CCceecC-c-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC----------cc---------cCCh-------hHHH
Q 028948 82 HDVYVST-G-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG----------SL---------EIPE-------ETLL 133 (201)
Q Consensus 82 ~gV~v~~-G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdG----------ti---------~i~~-------~~r~ 133 (201)
.|-+.++ | |.-+.+.....+..+.||+.+++-||++|-+.-- .. .+.. +.-.
T Consensus 31 dG~PFf~lgDT~W~l~~~l~~~e~~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g~~pf~~~~df~~~n~pn~~~YF~h~d 110 (463)
T 3kzs_A 31 NGTPFFWLGETGWLLPERLNRDEAEYYLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSMTDGYNFKNINQKGVYGYWDHMD 110 (463)
T ss_dssp TSCBCCEEEEECTTHHHHCCHHHHHHHHHHHHHTTCCEEEEESCSSSSCBCTTSCBSCSSTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCeEEechhHHHHHhcCCCHHHHHHHHHHHHHCCCCEEEEEeecCCCCCCcCCCCCcCCCcccccCCCcCHHHHHHHHH
Confidence 3555554 7 5333444444457999999999999999998871 11 1211 4456
Q ss_pred HHHHHHHHCCCeE
Q 028948 134 RYVRLVKSAGLKA 146 (201)
Q Consensus 134 ~lI~~~~~~Gf~v 146 (201)
+.|+++.+.||.+
T Consensus 111 ~~I~~a~~~Gi~~ 123 (463)
T 3kzs_A 111 YIIRTAAKKGLYI 123 (463)
T ss_dssp HHHHHHHHTTCEE
T ss_pred HHHHHHHHCCCeE
Confidence 7899999999998
No 345
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=45.56 E-value=20 Score=33.35 Aligned_cols=46 Identities=28% Similarity=0.448 Sum_probs=32.8
Q ss_pred chHHHHHHHHHHcCCCEEEec----------CCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 101 SAFKEYVEDCKQVGFDTIELN----------VGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEIS----------dGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
+..++-++.+|++||++|.++ .|..+. +-..++|+.++++|++|.+
T Consensus 29 ~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf--~~~d~~id~a~~~GL~viv 84 (516)
T 1vem_A 29 ETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDF--SYAQRFAQSVKNAGMKMIP 84 (516)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCC--HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecchhhccCCCCCccch--HHHHHHHHHHHHCCCEEEE
Confidence 366666777777777777772 344433 4456899999999999983
No 346
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=45.26 E-value=38 Score=29.81 Aligned_cols=105 Identities=18% Similarity=0.188 Sum_probs=63.4
Q ss_pred chhHHHHHHHhhcccc--cEEEeeCccccccChhHHHHHHHHHHhCCceecC----ccHHHHHHHhCCchHHHHHHHHHH
Q 028948 39 SHNVLEDIFESMGQFV--DGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQ 112 (201)
Q Consensus 39 g~~~l~DlLe~ag~yI--D~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~----GtlfE~al~qg~~~~~eyl~~~k~ 112 (201)
....++.+|+.|-+.= =+|.++-|+...++.+.+...+..+.+++|+|.. |..+ +.+..|-+
T Consensus 26 n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~~~VPValHlDHg~~~------------e~~~~ai~ 93 (305)
T 1rvg_A 26 NMEFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSY------------ESVLRALR 93 (305)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSH------------HHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHhCCCcEEEECCCCCCH------------HHHHHHHH
Confidence 3445555555443211 1455555554444444555555555557777765 3344 34456678
Q ss_pred cCCCEEEecCCcccCChhHH----HHHHHHHHHCCCeEccccccccCCC
Q 028948 113 VGFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFNKS 157 (201)
Q Consensus 113 lGFd~IEISdGti~i~~~~r----~~lI~~~~~~Gf~v~pE~g~k~~~~ 157 (201)
.||+.|=|.--. +|.++= .++++.++..|.-|-.|+|.==+.+
T Consensus 94 ~GFtSVMiDgS~--~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~E 140 (305)
T 1rvg_A 94 AGFTSVMIDKSH--EDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIE 140 (305)
T ss_dssp TTCSEEEECCTT--SCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSC
T ss_pred cCCCeeeeCCCC--CCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcc
Confidence 999999886544 454443 3678889999999999999754433
No 347
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=45.20 E-value=27 Score=29.10 Aligned_cols=85 Identities=15% Similarity=0.061 Sum_probs=46.9
Q ss_pred hHHHHHHHHHHhCCceecC----ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc----cCChhHHHHHHHHHHH
Q 028948 70 PFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL----EIPEETLLRYVRLVKS 141 (201)
Q Consensus 70 ~~L~eKI~l~~~~gV~v~~----GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti----~i~~~~r~~lI~~~~~ 141 (201)
+.+.+-++.+++||+.+.+ .+-- +.+.++.+.+ -||-++--..|.. ..+.++..++|+++++
T Consensus 134 ee~~~~~~~~~~~gl~~i~l~~p~t~~--------~rl~~ia~~a--~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~ 203 (262)
T 2ekc_A 134 EEAEELKAVMKKYVLSFVPLGAPTSTR--------KRIKLICEAA--DEMTYFVSVTGTTGAREKLPYERIKKKVEEYRE 203 (262)
T ss_dssp HHHHHHHHHHHHTTCEECCEECTTCCH--------HHHHHHHHHC--SSCEEEESSCC---------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCH--------HHHHHHHHhC--CCCEEEEecCCccCCCCCcCcccHHHHHHHHHh
Confidence 4578888888888875322 1111 1334444443 3564443222222 1221334577777777
Q ss_pred C-CCeEccccccccCC--CCcccccc
Q 028948 142 A-GLKAKPKFAVMFNK--SDIPSDRD 164 (201)
Q Consensus 142 ~-Gf~v~pE~g~k~~~--~dl~ag~~ 164 (201)
. .+.+...+|++.++ ..+.+|+|
T Consensus 204 ~~~~pv~vG~GI~t~e~~~~~~~gAD 229 (262)
T 2ekc_A 204 LCDKPVVVGFGVSKKEHAREIGSFAD 229 (262)
T ss_dssp HCCSCEEEESSCCSHHHHHHHHTTSS
T ss_pred hcCCCEEEeCCCCCHHHHHHHHcCCC
Confidence 5 67788888988654 34778888
No 348
>4axn_A Chitinase C1; hydrolase; 1.68A {Serratia marcescens}
Probab=45.12 E-value=11 Score=32.15 Aligned_cols=54 Identities=15% Similarity=0.172 Sum_probs=37.5
Q ss_pred ChhHHHHHHHHHHhCCceecC--ccHHHHHHHh--CC-chHHHHHHHHHHcCCCEEEec
Q 028948 68 PKPFIEEVVKRAHQHDVYVST--GDWAEHLIRN--GP-SAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 68 p~~~L~eKI~l~~~~gV~v~~--GtlfE~al~q--g~-~~~~eyl~~~k~lGFd~IEIS 121 (201)
+...+++.|..+|+.|++|.. |||--..... .+ .-++.+++.+++.|||.|.|.
T Consensus 81 ~~~~~~~~i~~~~~~g~kvllSiGG~~~~~~~~~~~r~~F~~s~~~~l~~ygfDGiDiD 139 (328)
T 4axn_A 81 SDTEFRRQVGVLNSQGRAVLISLGGADAHIELKTGDEDKLKDEIIRLVEVYGFDGLDID 139 (328)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEETTCCCCCCTTCHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCCCCccCChHHHHHHHHHHHHHHHHhCCCeEEEe
Confidence 346689999999999998764 7764211111 00 135677788899999999885
No 349
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=44.81 E-value=55 Score=26.31 Aligned_cols=42 Identities=5% Similarity=-0.088 Sum_probs=21.7
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCC
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf 144 (201)
+.+.++.|++.|+..|==||-.....-.....+++.++..||
T Consensus 149 ~~~il~l~k~~g~~ivisSDAh~~~~v~~~~~~~~l~~~~G~ 190 (212)
T 1v77_A 149 MMKAWKLVEKYKVRRFLTSSAQEKWDVRYPRDLISLGVVIGM 190 (212)
T ss_dssp HHHHHHHHHHHTCCEEEECCCSSGGGCCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCEEEeCCCCChhhcCCHHHHHHHHHHcCC
Confidence 345555555555555544444444444444555555555554
No 350
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=44.65 E-value=12 Score=31.53 Aligned_cols=46 Identities=9% Similarity=-0.037 Sum_probs=31.5
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecC
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST 88 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~ 88 (201)
......++++..++|++++|+|+--..-+..+ -|+.++++|..+..
T Consensus 19 ~~~~al~l~~~~~~~v~~~Kvg~~lf~~~G~~----~v~~L~~~g~~ifl 64 (239)
T 3tr2_A 19 TVEQARAQINPLTPELCHLKIGSILFTRYGPA----FVEELMQKGYRIFL 64 (239)
T ss_dssp SHHHHHHHHTTCCTTTCEEEEEHHHHHHHHHH----HHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHhCCcccEEEeCHHHHHhhCHH----HHHHHHhcCCCEEE
Confidence 67788999999999999999997554333332 34444566655543
No 351
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=44.53 E-value=1e+02 Score=26.79 Aligned_cols=72 Identities=15% Similarity=0.225 Sum_probs=49.6
Q ss_pred ChhHHHHHHHHHHhCCceecC--------ccHH-----------------H--HHHHhCCchHHHHHHHHHHcCCCEEEe
Q 028948 68 PKPFIEEVVKRAHQHDVYVST--------GDWA-----------------E--HLIRNGPSAFKEYVEDCKQVGFDTIEL 120 (201)
Q Consensus 68 p~~~L~eKI~l~~~~gV~v~~--------Gtlf-----------------E--~al~qg~~~~~eyl~~~k~lGFd~IEI 120 (201)
..+.|++.++.|+++|+.|.. |.|- . .-+.+ .+..|.+.|...+.+++=|
T Consensus 95 ~~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~i~~~~~~~~~~~~w~~~f~~y~~---~i~~~a~~a~~~~V~~~~I 171 (343)
T 3civ_A 95 SDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFEKEHGPDLESWEAWFGSYSD---MMAHYAHVAKRTGCEMFCV 171 (343)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCSBSCCTTSSBHHHHHHHHHH---HHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEEeeccCCcccccccccCcCCcchHHHHHHHHHHHH---HHHHHHHHccCCCceEEEE
Confidence 566799999999999998833 5441 0 11122 4677777788888888877
Q ss_pred cCCcccC--ChhHHHHHHHHHHHC
Q 028948 121 NVGSLEI--PEETLLRYVRLVKSA 142 (201)
Q Consensus 121 SdGti~i--~~~~r~~lI~~~~~~ 142 (201)
-+-.... ..+.+.+||+.+++.
T Consensus 172 GNE~~~~~~~~~~~~~Li~~vR~~ 195 (343)
T 3civ_A 172 GCEMTTAEPHEAMWRETIARVRTE 195 (343)
T ss_dssp EESCTTTTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHhh
Confidence 6543332 456788899888876
No 352
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=44.41 E-value=58 Score=26.78 Aligned_cols=81 Identities=10% Similarity=0.130 Sum_probs=52.5
Q ss_pred HHHHHHHHHHhCCceec---Ccc----------HHHHHHHhCCchHHHHHHHHHHcCCC--EEEe--cCCcccCChhHHH
Q 028948 71 FIEEVVKRAHQHDVYVS---TGD----------WAEHLIRNGPSAFKEYVEDCKQVGFD--TIEL--NVGSLEIPEETLL 133 (201)
Q Consensus 71 ~L~eKI~l~~~~gV~v~---~Gt----------lfE~al~qg~~~~~eyl~~~k~lGFd--~IEI--SdGti~i~~~~r~ 133 (201)
.+++-|++|++.|+.+. +|+ --|.++.+--+.+.+..+.+++.|.. ++|- -++.+--+.++-.
T Consensus 115 ~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~~l~lE~~~~~~~~~~t~~~~~ 194 (316)
T 3qxb_A 115 HLKRAIDMTAAMEVPATGMPFGSYSAADALNPARREEIYAIARDMWIELAAYAKRQGLSMLYVEPVPLATEFPSSAADAA 194 (316)
T ss_dssp HHHHHHHHHHHTTCCEEEECCBBCCHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSCTTBSSCSHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEecCCCcCccccCCcccHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEecCCccccCCCHHHHH
Confidence 47888999999999543 232 12333333223688888889999998 5775 3444444567778
Q ss_pred HHHHHH---HHCCCeEccccc
Q 028948 134 RYVRLV---KSAGLKAKPKFA 151 (201)
Q Consensus 134 ~lI~~~---~~~Gf~v~pE~g 151 (201)
++++.+ ....+.+...++
T Consensus 195 ~l~~~v~~~~~~~vg~~lD~~ 215 (316)
T 3qxb_A 195 RLMADLDGRTEIPVRLLVDWG 215 (316)
T ss_dssp HHHHHHTTTSSSCEEEEEEHH
T ss_pred HHHHHHhccCCCCEEEEEEcc
Confidence 999988 444566644433
No 353
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=44.25 E-value=26 Score=27.77 Aligned_cols=69 Identities=16% Similarity=0.109 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhCCceec--CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc---C-ChhHHHHHHHHHHHCCC
Q 028948 71 FIEEVVKRAHQHDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE---I-PEETLLRYVRLVKSAGL 144 (201)
Q Consensus 71 ~L~eKI~l~~~~gV~v~--~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~---i-~~~~r~~lI~~~~~~Gf 144 (201)
.+++.++..+.-++.+. |.... -+..+++.++.+++.| ..|||+.++.. . ......++.+.+++.|+
T Consensus 113 ~~~~~~~~i~~g~~~vlaHp~~~~------~~~~~~~~~~~~~~~g-~~iEvn~~~~~~~~~g~~~~~~~~~~~~~~~g~ 185 (245)
T 1m65_A 113 NTQAMIATIASGNVHIISHPGNPK------YEIDVKAVAEAAAKHQ-VALEINNSSFLHSRKGSEDNCREVAAAVRDAGG 185 (245)
T ss_dssp HHHHHHHHHHTSCCSEECCTTCTT------SCCCHHHHHHHHHHHT-CEEEEETTC----------CHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCEEECCCCcc------chhHHHHHHHHHHHcC-CEEEEECCCCcccCCCCCCchHHHHHHHHHcCC
Confidence 35677777774445544 33210 1124778899999999 79999999873 1 12344578888899998
Q ss_pred eE
Q 028948 145 KA 146 (201)
Q Consensus 145 ~v 146 (201)
.+
T Consensus 186 ~~ 187 (245)
T 1m65_A 186 WV 187 (245)
T ss_dssp CE
T ss_pred EE
Confidence 86
No 354
>2bas_A YKUI protein; EAL domain, structural genom protein structure initiative, midwest center for structural genomics, MCSG, signaling protein; 2.61A {Bacillus subtilis} SCOP: c.1.33.1 d.110.6.2 PDB: 2w27_A*
Probab=44.23 E-value=19 Score=32.03 Aligned_cols=102 Identities=10% Similarity=0.097 Sum_probs=63.5
Q ss_pred HHHHHHhhcccccEEEeeCcccc-ccChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEec
Q 028948 43 LEDIFESMGQFVDGLKFSGGSHS-LMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs~-l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEIS 121 (201)
+.++|+..+---+-|-|=.--+. +.+.+.+.+.++.+|++|+.+....|- .|.+. +..+.++.+|.|-|+
T Consensus 129 l~~~l~~~~~~~~~l~lEItE~~~~~~~~~~~~~l~~Lr~~G~~ialDDFG-----~g~ss----l~~L~~l~~d~iKID 199 (431)
T 2bas_A 129 LLKEYEAKGIELHRFVLEITEHNFEGDIEQLYHMLAYYRTYGIKIAVDNIG-----KESSN----LDRIALLSPDLLKID 199 (431)
T ss_dssp HHHHHHHTTCCGGGEEEEECCTTCCSCHHHHHHHHHHHHTTTCEEEEEEET-----TTBCC----HHHHHHHCCSEEEEE
T ss_pred HHHHHHHcCCCCCeEEEEEECChhhCCHHHHHHHHHHHHHCCCEEEEECCC-----CCcHH----HHHHHhCCCCEEEEC
Confidence 45566665543344555543333 556677889999999999988862211 12122 335567889999999
Q ss_pred CCccc-CCh-----hHHHHHHHHHHHCCCeEcccccccc
Q 028948 122 VGSLE-IPE-----ETLLRYVRLVKSAGLKAKPKFAVMF 154 (201)
Q Consensus 122 dGti~-i~~-----~~r~~lI~~~~~~Gf~v~pE~g~k~ 154 (201)
-.++. +.. .-...++..+++.|++|..| |+..
T Consensus 200 ~s~v~~~~~~~~~~~il~~ii~la~~lg~~vvAE-GVEt 237 (431)
T 2bas_A 200 LQALKVSQPSPSYEHVLYSISLLARKIGAALLYE-DIEA 237 (431)
T ss_dssp CTTTC----CCHHHHHHHHHHHHHHHHTCEEEEE-CCCS
T ss_pred HHHHhhhhcCHhHHHHHHHHHHHHHHcCCEEEEE-eCCC
Confidence 88874 322 12446778889999999665 4443
No 355
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=44.22 E-value=12 Score=29.63 Aligned_cols=79 Identities=10% Similarity=0.083 Sum_probs=58.2
Q ss_pred EEEeeCccccccChhHHHHHHHHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH
Q 028948 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL 133 (201)
Q Consensus 56 ~lKfg~GTs~l~p~~~L~eKI~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~ 133 (201)
+-|-.+.. ++..+ |. ++++++|| .+. .|-..++|+.+- ..+ +.++||+++=++|.+-+.+++...
T Consensus 110 i~K~~~sa--F~~t~-L~---~~L~~~gi~~lvi~G~~T~~CV~~T--a~d-----a~~~Gy~v~vv~Da~as~~~~~h~ 176 (199)
T 1j2r_A 110 IIKRQWGA--FYGTD-LE---LQLRRRGIDTIVLCGISTNIGVEST--ARN-----AWELGFNLVIAEDACSAASAEQHN 176 (199)
T ss_dssp EEESSSSS--STTSS-HH---HHHHHTTCCEEEEEEECTTTHHHHH--HHH-----HHHTTCEEEEEEEEEEBSSHHHHH
T ss_pred EeCCCcCC--cCCCC-HH---HHHHHCCCCEEEEEeeeccHHHHHH--HHH-----HHHCCCEEEEehhhcCCCCHHHHH
Confidence 55765543 44433 44 45678899 344 487889998885 444 678999999999999999999998
Q ss_pred HHHHHHHHCCCeEc
Q 028948 134 RYVRLVKSAGLKAK 147 (201)
Q Consensus 134 ~lI~~~~~~Gf~v~ 147 (201)
..++..+..|-.|.
T Consensus 177 ~al~~~~~~~~~v~ 190 (199)
T 1j2r_A 177 NSINHIYPRIARVR 190 (199)
T ss_dssp HHHHHTHHHHSEEE
T ss_pred HHHHHHHHheeEEe
Confidence 88888877765553
No 356
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP: b.30.5.11 c.1.8.13
Probab=44.13 E-value=27 Score=32.77 Aligned_cols=44 Identities=9% Similarity=0.249 Sum_probs=37.7
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc-----------cCChhHHHHHHHHHHHCCCeE
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGSL-----------EIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGti-----------~i~~~~r~~lI~~~~~~Gf~v 146 (201)
+.+.+.++.++++|+++|-|.||-. ..|. ...+++.+++.||++
T Consensus 212 ~~v~~~ad~~~~~G~~~~~IDdgW~~~~Gdw~~d~~kFP~--lk~lvd~lh~~Glk~ 266 (564)
T 1zy9_A 212 EETLKNLKLAKNFPFEVFQIDDAYEKDIGDWLVTRGDFPS--VEEMAKVIAENGFIP 266 (564)
T ss_dssp HHHHHHHHHGGGTTCSEEEECTTSEEETTEEEEECTTCCC--HHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHhcCCcEEEECcccccccCCcccCcccCCC--HHHHHHHHHHCCCEE
Confidence 4799999999999999999999743 2444 779999999999997
No 357
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=44.11 E-value=67 Score=27.87 Aligned_cols=107 Identities=13% Similarity=0.137 Sum_probs=63.6
Q ss_pred chhHHHHHHHhhccc--ccEEEeeCccccc-cChhHHHHHH-HHHH--hCCceecC----ccHHHHHHHhCCchHHHHHH
Q 028948 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSL-MPKPFIEEVV-KRAH--QHDVYVST----GDWAEHLIRNGPSAFKEYVE 108 (201)
Q Consensus 39 g~~~l~DlLe~ag~y--ID~lKfg~GTs~l-~p~~~L~eKI-~l~~--~~gV~v~~----GtlfE~al~qg~~~~~eyl~ 108 (201)
.+..++.+|+.|-+- ==+|.++-|+... .+.+.+...+ .+++ +++|+|.. |.++|. +.
T Consensus 30 n~e~~~avi~AAee~~sPvIlq~s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~------------i~ 97 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVILGVSEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEK------------CK 97 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHH------------HH
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHH------------HH
Confidence 445555555544321 1145555555444 3444454444 3566 67777775 345554 44
Q ss_pred HHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHCCCeEccccccccCCC
Q 028948 109 DCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNKS 157 (201)
Q Consensus 109 ~~k~lGFd~IEISdGti~i~~~--~r~~lI~~~~~~Gf~v~pE~g~k~~~~ 157 (201)
.|-+.||+.|=|.--.+++.+- .=.++++.++..|.-|-.|+|.=-+..
T Consensus 98 ~ai~~GFtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~E 148 (288)
T 3q94_A 98 EAIDAGFTSVMIDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQE 148 (288)
T ss_dssp HHHHHTCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSC
T ss_pred HHHHcCCCeEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeecccc
Confidence 5677899999985544433321 123788899999999999999654443
No 358
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase); 1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A 1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A
Probab=44.03 E-value=42 Score=28.16 Aligned_cols=68 Identities=10% Similarity=0.160 Sum_probs=43.8
Q ss_pred HHHHHHHHhCCceecC--ccHHH---------HHHHhCCchHHHHHHHHHHcCCCEEEecCCccc--------CChhHHH
Q 028948 73 EEVVKRAHQHDVYVST--GDWAE---------HLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE--------IPEETLL 133 (201)
Q Consensus 73 ~eKI~l~~~~gV~v~~--GtlfE---------~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~--------i~~~~r~ 133 (201)
.+.|..+|+.|++|.. |||.. ..-++. -++.-++.+++.|||.|.|.--.-. -+.+...
T Consensus 73 ~~~i~~~~~~g~KvllsiGG~~~~~~~~~l~s~~~r~~--f~~s~~~~~~~~~fDGiDiDwE~p~~~~~g~~~~d~~~~~ 150 (271)
T 1edt_A 73 VTQIRPLQQQGIKVLLSVLGNHQGAGFANFPSQQAASA--FAKQLSDAVAKYGLDGVDFDDEYAEYGNNGTAQPNDSSFV 150 (271)
T ss_dssp HHHTHHHHHTTCEEEEEEEECTTSCCTTCCSSHHHHHH--HHHHHHHHHHHHTCCEEEEECSSCCTTGGGCCCCCSSHHH
T ss_pred HHHHHHHhcCCCEEEEEECCCCCCCCceecCCHHHHHH--HHHHHHHHHHHhCCCeEEEecccCCCCCCCCCCCCHHHHH
Confidence 4567778899998876 77742 111221 3556667788999999999644321 1234566
Q ss_pred HHHHHHHHC
Q 028948 134 RYVRLVKSA 142 (201)
Q Consensus 134 ~lI~~~~~~ 142 (201)
.+++.+++.
T Consensus 151 ~ll~eLr~~ 159 (271)
T 1edt_A 151 HLVTALRAN 159 (271)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777777765
No 359
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=43.75 E-value=21 Score=28.82 Aligned_cols=87 Identities=11% Similarity=0.164 Sum_probs=48.7
Q ss_pred cccccChhHHHHHHHHHHhCCceecC-c-cHHHHHHHhCCchHHHHHHHHHHcCC----------------------CEE
Q 028948 63 SHSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIRNGPSAFKEYVEDCKQVGF----------------------DTI 118 (201)
Q Consensus 63 Ts~l~p~~~L~eKI~l~~~~gV~v~~-G-tlfE~al~qg~~~~~eyl~~~k~lGF----------------------d~I 118 (201)
...+..++.+....++..++++...- - -+-|....++++.+.+.++.++++|| |.|
T Consensus 99 ~~~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~l~~~G~~ialDdfG~g~ssl~~L~~l~~d~i 178 (259)
T 3s83_A 99 TGEIDRPGLVADVAETLRVNRLPRGALKLEVTESDIMRDPERAAVILKTLRDAGAGLALDDFGTGFSSLSYLTRLPFDTL 178 (259)
T ss_dssp TTGGGSTTHHHHHHHHHHHTTCCTTSEEEEEEHHHHHHCHHHHHHHHHHHHHHTCEEEEECC---CHHHHHHHHSCCCEE
T ss_pred HHHhCCcHHHHHHHHHHHHcCCCcceEEEEECCchhhhCHHHHHHHHHHHHHCCCEEEEECCCCCchhHHHHHhCCCCEE
Confidence 34456666666666777777664322 1 24455555544455566666666555 555
Q ss_pred EecCCcc-cCChhH-----HHHHHHHHHHCCCeEccc
Q 028948 119 ELNVGSL-EIPEET-----LLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 119 EISdGti-~i~~~~-----r~~lI~~~~~~Gf~v~pE 149 (201)
-|+-.++ .+..+. -..+++.+++.|.+|..|
T Consensus 179 KiD~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~viae 215 (259)
T 3s83_A 179 KIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVAE 215 (259)
T ss_dssp EECHHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred EECHHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEEE
Confidence 5554333 121221 345677888888888654
No 360
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=43.70 E-value=30 Score=32.36 Aligned_cols=45 Identities=27% Similarity=0.422 Sum_probs=35.4
Q ss_pred chHHHHHHHH-----HHcCCCEEEecCCccc---------------CChhHHHHHHHHHHHCCCeE
Q 028948 101 SAFKEYVEDC-----KQVGFDTIELNVGSLE---------------IPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 101 ~~~~eyl~~~-----k~lGFd~IEISdGti~---------------i~~~~r~~lI~~~~~~Gf~v 146 (201)
+.+.++.+.+ +++|++.|-|.||-.. +|. ....+++.+++.||++
T Consensus 29 ~~~~~~ad~~~~~g~~~~G~~~~~iDdgW~~~~~d~~g~~~~~~~~fP~-gl~~l~~~i~~~Glk~ 93 (614)
T 3a21_A 29 SVIKKQVDAFVAAGLPAAGYTYINIDEGWWQGTRDSAGNITVDTAEWPG-GMSAITAYIHSKGLKA 93 (614)
T ss_dssp HHHHHHHHHHHHTTHHHHTCCEEECCTTSCCSCBCTTCCBCCCTTTSTT-CHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCHHhhCCEEEEECCCcCCCCcCCCCCEEECccccCC-cHHHHHHHHHHCCCee
Confidence 4688888886 8999999999887542 332 3569999999999996
No 361
>2fds_A Orotidine-monophosphate-decarboxylase; TIM barrel, structural genomics, structural genomics consortium, SGC, unknown function; 1.72A {Plasmodium berghei} SCOP: c.1.2.3 PDB: 2aqw_A
Probab=43.53 E-value=35 Score=30.53 Aligned_cols=47 Identities=6% Similarity=-0.110 Sum_probs=35.2
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhH---HHHHHHHHHhCCceecC
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPF---IEEVVKRAHQHDVYVST 88 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~---L~eKI~l~~~~gV~v~~ 88 (201)
+..++++..++|++++|.|..-..-+..+. |++.|+.++++|..|..
T Consensus 107 f~~~iida~~~~v~~vKvg~~lf~~~G~~gv~~L~~~i~~lk~~g~~Vfl 156 (352)
T 2fds_A 107 FCFYIINNTKEYALIYKMNFAFYIPYGSVGINALKNVFDYLNSMNIPTML 156 (352)
T ss_dssp HHHHHHHHHGGGCSEEEEEGGGTGGGTHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHhccccCEEEecHHHHHhCCHHHHHHHHHHHHHHHHCCCeEEE
Confidence 336899999999999999986665555443 46667888888876664
No 362
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=43.52 E-value=11 Score=31.52 Aligned_cols=45 Identities=16% Similarity=0.217 Sum_probs=30.9
Q ss_pred hHHHHHHHHHH-cCCCEEEecCCccc-------C--ChhHHHHHHHHHHHC-CCeE
Q 028948 102 AFKEYVEDCKQ-VGFDTIELNVGSLE-------I--PEETLLRYVRLVKSA-GLKA 146 (201)
Q Consensus 102 ~~~eyl~~~k~-lGFd~IEISdGti~-------i--~~~~r~~lI~~~~~~-Gf~v 146 (201)
.+.+..+.+.+ .|||.|||+-++-. + +.+...++|+.+++. ++.|
T Consensus 112 ~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv 167 (311)
T 1ep3_A 112 DYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPL 167 (311)
T ss_dssp HHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCE
Confidence 45666667777 89999999754321 1 445557888888887 6654
No 363
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=43.41 E-value=17 Score=31.16 Aligned_cols=72 Identities=18% Similarity=0.199 Sum_probs=48.3
Q ss_pred cccccEEEeeCccccccChhHHHHHHHHHHhCCceecC------ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc
Q 028948 51 GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST------GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS 124 (201)
Q Consensus 51 g~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~------GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGt 124 (201)
.+|||+= .-.+++.+++.++.+|+.++++-- +|.- . +.+.+.++.+.++|.|.|-|-.
T Consensus 134 ~dyIDvE-------l~~~~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~-----~--~el~~~~~~~~~~GaDIvKia~-- 197 (276)
T 3o1n_A 134 VDMIDLE-------LFTGDDEVKATVGYAHQHNVAVIMSNHDFHKTPA-----A--EEIVQRLRKMQELGADIPKIAV-- 197 (276)
T ss_dssp CSEEEEE-------GGGCHHHHHHHHHHHHHTTCEEEEEEEESSCCCC-----H--HHHHHHHHHHHHTTCSEEEEEE--
T ss_pred CCEEEEE-------CcCCHHHHHHHHHHHHhCCCEEEEEeecCCCCcC-----H--HHHHHHHHHHHHcCCCEEEEEe--
Confidence 5677762 234677899999999999996532 3431 1 2577788899999999999863
Q ss_pred ccCChhHHHHHHHH
Q 028948 125 LEIPEETLLRYVRL 138 (201)
Q Consensus 125 i~i~~~~r~~lI~~ 138 (201)
..-+.+|=+++.+.
T Consensus 198 ~a~s~~Dvl~Ll~~ 211 (276)
T 3o1n_A 198 MPQTKADVLTLLTA 211 (276)
T ss_dssp CCSSHHHHHHHHHH
T ss_pred cCCChHHHHHHHHH
Confidence 33334455555443
No 364
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=43.34 E-value=38 Score=31.47 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=23.4
Q ss_pred cCChhHHHHHHHHHHHCCCeEccccc
Q 028948 126 EIPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 126 ~i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
-.+.++-.++++.|+++|..|.||+-
T Consensus 227 ~YT~~di~eiv~yA~~rgI~VIPEID 252 (512)
T 1jak_A 227 YYTKAEYKEIVRYAASRHLEVVPEID 252 (512)
T ss_dssp CBCHHHHHHHHHHHHHTTCEEEEECC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEccC
Confidence 35789999999999999999999984
No 365
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=43.23 E-value=1.2e+02 Score=23.99 Aligned_cols=82 Identities=10% Similarity=0.014 Sum_probs=47.9
Q ss_pred hhHHHHHHHHHHhCCcee---cCc--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc------cCChhHHHHHHH
Q 028948 69 KPFIEEVVKRAHQHDVYV---STG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL------EIPEETLLRYVR 137 (201)
Q Consensus 69 ~~~L~eKI~l~~~~gV~v---~~G--tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti------~i~~~~r~~lI~ 137 (201)
++.+++-++.+|++|+.+ ..| |. |- .+.+.++|+|++=+.-++. ..+.+ -++.|+
T Consensus 95 ~~~~~~~~~~~~~~g~~~~~d~l~~~T~-~~------------~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~-~l~~i~ 160 (218)
T 3jr2_A 95 IATIAACKKVADELNGEIQIEIYGNWTM-QD------------AKAWVDLGITQAIYHRSRDAELAGIGWTTD-DLDKMR 160 (218)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCSSCCH-HH------------HHHHHHTTCCEEEEECCHHHHHHTCCSCHH-HHHHHH
T ss_pred HHHHHHHHHHHHHhCCccceeeeecCCH-HH------------HHHHHHcCccceeeeeccccccCCCcCCHH-HHHHHH
Confidence 445788888888888865 445 43 21 1122445999876533321 12333 346677
Q ss_pred HHHHCCCeEccccccccCC--CCcccccc
Q 028948 138 LVKSAGLKAKPKFAVMFNK--SDIPSDRD 164 (201)
Q Consensus 138 ~~~~~Gf~v~pE~g~k~~~--~dl~ag~~ 164 (201)
+++...+.+...-|++..+ .-+++|++
T Consensus 161 ~~~~~~~pi~v~GGI~~~~~~~~~~aGAd 189 (218)
T 3jr2_A 161 QLSALGIELSITGGIVPEDIYLFEGIKTK 189 (218)
T ss_dssp HHHHTTCEEEEESSCCGGGGGGGTTSCEE
T ss_pred HHhCCCCCEEEECCCCHHHHHHHHHcCCC
Confidence 7766678777777886433 34556666
No 366
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=43.18 E-value=32 Score=32.77 Aligned_cols=47 Identities=19% Similarity=0.313 Sum_probs=29.8
Q ss_pred chHHHHHHHHHHcCCCEEEec--------CCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 101 SAFKEYVEDCKQVGFDTIELN--------VGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEIS--------dGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
..+..-|+.+|++|++.|++. ++--.-.=.--.+|.+++++.|||+.
T Consensus 31 ~~l~a~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsgY~~L~~mvr~~GLKlq 85 (535)
T 2xfr_A 31 DELRAQLRKLVEAGVDGVMVDVWWGLVEGKGPKAYDWSAYKQLFELVQKAGLKLQ 85 (535)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEHHHHTCSSTTCCCCHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEeEeeeeccCCCCccCcHHHHHHHHHHHHcCCeEE
Confidence 456777777777777777764 23333344455677777777777773
No 367
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=43.00 E-value=28 Score=30.44 Aligned_cols=57 Identities=23% Similarity=0.261 Sum_probs=39.3
Q ss_pred HHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-------CCh---hHHHHHHHHHHHCCCeEccc
Q 028948 92 AEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-------IPE---ETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 92 fE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~-------i~~---~~r~~lI~~~~~~Gf~v~pE 149 (201)
+|.++. +|--.++.++.++++||++|-|+-+--. +.+ +...++|+.+.++|++|+..
T Consensus 44 ~e~~Wg-~~~~t~~di~~ik~~G~N~vRipi~w~~~~~~~g~~d~~~l~~ld~vVd~a~~~Gi~vIld 110 (353)
T 3l55_A 44 YETFWG-QPETTQDMMTFLMQNGFNAVRIPVTWYEHMDAEGNVDEAWMMRVKAIVEYAMNAGLYAIVN 110 (353)
T ss_dssp HHTTTS-CCCCCHHHHHHHHHTTEEEEEECCCCGGGBCTTCCBCHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred cCCccC-CCCCCHHHHHHHHHcCCCEEEEcccHHHhcCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 344443 2223688999999999999999865322 222 33457899999999999443
No 368
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=42.98 E-value=1.2e+02 Score=27.72 Aligned_cols=24 Identities=13% Similarity=0.086 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSL 125 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti 125 (201)
.+.+..+.+.+.|.|.|-+++++.
T Consensus 312 d~~~iA~~~~~aGaDgI~v~ntt~ 335 (443)
T 1tv5_A 312 QKKEIADVLLETNIDGMIISNTTT 335 (443)
T ss_dssp HHHHHHHHHHHTTCSEEEECCCBS
T ss_pred HHHHHHHHHHHcCCCEEEEECCCc
Confidence 567788889999999999999987
No 369
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome, secreted, hydrolase; 2.70A {Homo sapiens}
Probab=42.93 E-value=59 Score=28.72 Aligned_cols=76 Identities=13% Similarity=0.182 Sum_probs=47.7
Q ss_pred HHHHhhcccccEEEeeCcc--------ccccCh-hHHHHHHHHHHhC--CceecC----ccH----HHHHHHhCC----c
Q 028948 45 DIFESMGQFVDGLKFSGGS--------HSLMPK-PFIEEVVKRAHQH--DVYVST----GDW----AEHLIRNGP----S 101 (201)
Q Consensus 45 DlLe~ag~yID~lKfg~GT--------s~l~p~-~~L~eKI~l~~~~--gV~v~~----Gtl----fE~al~qg~----~ 101 (201)
+..+.-.+.++.|=++|.. ..+.+. +.-.+.+..+|++ +++|.+ ||| |..++. ++ .
T Consensus 94 ~~~~~~~~~lThi~~af~~i~~~g~~~l~~~~~~d~~~~~~~~lk~~~~~lkvl~~isiGGw~~~~f~~~~~-~~~~R~~ 172 (393)
T 3bxw_B 94 DVTKVFGSKFTQISPVWLQLKRRGREMFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDDFRNVLD-SEDEIEE 172 (393)
T ss_dssp HHHHHHGGGCSEEEECCEEEEEEETTEEEEECGGGCCHHHHHHHHHHSSSCEECCEEEECSCCHHHHHHHHT-CHHHHHH
T ss_pred ChhhcCHhhCCEEEEEEEEEecCCCceEEecCCCccCHHHHHHHHhhCCCCEEEEEEeECCCCHHHHHHHhc-CHHHHHH
Confidence 4556667788888777743 222221 1124667677766 777653 776 343332 11 1
Q ss_pred hHHHHHHHHHHcCCCEEEec
Q 028948 102 AFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEIS 121 (201)
-++.-++.+++.|||.|.|.
T Consensus 173 fi~siv~~~~~~gfDGidiD 192 (393)
T 3bxw_B 173 LSKTVVQVAKNQHFDGFVVE 192 (393)
T ss_dssp HHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEec
Confidence 46777889999999999997
No 370
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=42.93 E-value=43 Score=29.10 Aligned_cols=97 Identities=15% Similarity=0.280 Sum_probs=60.4
Q ss_pred HHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecC---c-cHHHHHHHhCCchHHHHHHHHHHcCCCEE
Q 028948 43 LEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 43 l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~---G-tlfE~al~qg~~~~~eyl~~~k~lGFd~I 118 (201)
+.++|+..+---.-+-|=.--+.+...+.+.+.++.+|++|+.+.. | |+- -+..++++.+|.|
T Consensus 296 l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~~~l~~~G~~ialDdfG~g~s-------------sl~~L~~l~~d~i 362 (430)
T 3pjx_A 296 VFEILRAHSNLGARLTLEIGEEQLPEQAVLEQLTRRLRELGFSLSLQRFGGRFS-------------MIGNLARLGLAYL 362 (430)
T ss_dssp HHHHHHTTGGGGGGEEEEEEGGGCCCHHHHHHHHHHHHHHTCEEEEEEECCCHH-------------HHCTHHHHCCSCE
T ss_pred HHHHHHhcCCCCceEEEEEECccccccHHHHHHHHHHHHCCCEEEEeCCCCCch-------------hHHHHHhCCCCEE
Confidence 3344444443223455554445556667777888888888888875 4 222 1334567789999
Q ss_pred EecCCccc-CChhH-----HHHHHHHHHHCCCeEccccccc
Q 028948 119 ELNVGSLE-IPEET-----LLRYVRLVKSAGLKAKPKFAVM 153 (201)
Q Consensus 119 EISdGti~-i~~~~-----r~~lI~~~~~~Gf~v~pE~g~k 153 (201)
-|+-.++. +..+. -..++..+++.|++|..| |+.
T Consensus 363 KiD~~~v~~~~~~~~~~~~~~~i~~~a~~l~~~viae-GVE 402 (430)
T 3pjx_A 363 KIDGSYIRAIDQESDKRLFIEAIQRAAHSIDLPLIAE-RVE 402 (430)
T ss_dssp EECGGGTTTTTTCHHHHHHHHHHHHHHHTTTCCEEEC-CCC
T ss_pred EECHHHHHhHhcChhhHHHHHHHHHHHHHCCCcEEEE-ecC
Confidence 99977763 33332 346778889999998765 443
No 371
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=42.92 E-value=65 Score=27.60 Aligned_cols=82 Identities=13% Similarity=0.166 Sum_probs=51.5
Q ss_pred ccccChhHHHHHHHHHHhCCceecC---cc-HHH--------HHHHhCC---------chHHHHHHHHHHcCCCEEEecC
Q 028948 64 HSLMPKPFIEEVVKRAHQHDVYVST---GD-WAE--------HLIRNGP---------SAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 64 s~l~p~~~L~eKI~l~~~~gV~v~~---Gt-lfE--------~al~qg~---------~~~~eyl~~~k~lGFd~IEISd 122 (201)
....+.+.+++-++.++++|.++.. .. +.+ .....+. ..+.+.+..++..|... .|.-
T Consensus 153 ~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~-~i~H 231 (428)
T 3mpg_A 153 VGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHY-HVCH 231 (428)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCE-EECS
T ss_pred cCCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCE-EEEe
Confidence 3445677889999999999987654 11 211 0001000 13556667788888753 3433
Q ss_pred CcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 123 GSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
++..+-.++|+++++.|+.|..|.
T Consensus 232 ----~s~~~~~~~i~~a~~~G~~v~~e~ 255 (428)
T 3mpg_A 232 ----VSTKGSVRVIRDAKRAGIKVTAEV 255 (428)
T ss_dssp ----CCCHHHHHHHHHHHHTTCCEEECB
T ss_pred ----CCCHHHHHHHHHHHhcCCCEEEEE
Confidence 334566799999999999986654
No 372
>3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str}
Probab=42.32 E-value=24 Score=34.63 Aligned_cols=49 Identities=20% Similarity=0.199 Sum_probs=36.3
Q ss_pred HHHHHHHcCCCEEEecCCccc---------------C-----ChhHHHHHHHHHHHCCCeEcccccccc
Q 028948 106 YVEDCKQVGFDTIELNVGSLE---------------I-----PEETLLRYVRLVKSAGLKAKPKFAVMF 154 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~---------------i-----~~~~r~~lI~~~~~~Gf~v~pE~g~k~ 154 (201)
-+++++++||++|.+|-=+-. + +.++..++|+.++++|++|.-.+=.+.
T Consensus 20 ~LdyL~~LGvt~V~LsPi~e~~~~s~~GYd~~Dy~~vdp~lGt~edfk~LV~~aH~~GI~VilDvV~NH 88 (704)
T 3hje_A 20 RLDYFVELGVTHLYLSPVLKARPGSTHGYDVVDYNTINDELGGEEEYIRLIDEAKSKGLGIIQDIVPNH 88 (704)
T ss_dssp THHHHHHHTCSEEEECCCEEESTTCSSSCSEEEEEEECGGGTHHHHHHHHHHHHHHHTCEEEEEECCSE
T ss_pred HHHHHHHCCCCEEEECCCccCCCCCCCCCCCcCCCCcCccCCCHHHHHHHHHHHHHCCCEEEEeecccc
Confidence 356778999999999742221 1 147899999999999999966655544
No 373
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=42.17 E-value=1.6e+02 Score=24.98 Aligned_cols=77 Identities=12% Similarity=0.147 Sum_probs=49.3
Q ss_pred ccChhHHHHHHHHHHhCCceecC--cc--HHHH----HHHhCC----------------chHHHHHHHHHHcCCCEEEec
Q 028948 66 LMPKPFIEEVVKRAHQHDVYVST--GD--WAEH----LIRNGP----------------SAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 66 l~p~~~L~eKI~l~~~~gV~v~~--Gt--lfE~----al~qg~----------------~~~~eyl~~~k~lGFd~IEIS 121 (201)
..+.+.+++.++.++++|..+.. -+ ..+. +...|. ..++++++.++.+|.... +
T Consensus 159 ~~~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~-~- 236 (458)
T 1gkp_A 159 GVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGY-V- 236 (458)
T ss_dssp BCCHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEE-E-
T ss_pred CCCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEE-E-
Confidence 34677789999999999986653 22 2222 233331 134466677777886643 3
Q ss_pred CCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 122 VGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 122 dGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
..++.++-.+.|+.+++.|..|.
T Consensus 237 ---~H~~~~~~~~~i~~~~~~G~~v~ 259 (458)
T 1gkp_A 237 ---VHLSCKPALDAAMAAKARGVPIY 259 (458)
T ss_dssp ---CSCCSHHHHHHHHHHHHTTCCEE
T ss_pred ---EeCCCHHHHHHHHHHHHcCCeEE
Confidence 34455565788999999998763
No 374
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=42.15 E-value=21 Score=30.13 Aligned_cols=74 Identities=11% Similarity=0.218 Sum_probs=0.0
Q ss_pred cccccChhHHHHHHHHHHhCCceecC---c-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcc-cCChhHHHH---
Q 028948 63 SHSLMPKPFIEEVVKRAHQHDVYVST---G-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSL-EIPEETLLR--- 134 (201)
Q Consensus 63 Ts~l~p~~~L~eKI~l~~~~gV~v~~---G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti-~i~~~~r~~--- 134 (201)
+..+.+.+.+.+.++.+|++|+.+.. | |+.-..+.+. +.||.|-|+-.++ .+..+.+.+
T Consensus 156 ~~~~~~~~~~~~~l~~Lr~~G~~ialDDFGtG~ssl~~L~~-------------l~~d~iKID~sfv~~i~~~~~~~~iv 222 (294)
T 2r6o_A 156 NVMLVMTDEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQ-------------LPFHGLKIDQSFVRKIPAHPSETQIV 222 (294)
T ss_dssp GGGGGCCHHHHHHHHHHHHHTCEEEEEEETSSCBCHHHHHH-------------SCCCEEEECHHHHTTTTTSHHHHHHH
T ss_pred CchhhChHHHHHHHHHHHHCCCEEEEECCCCCchhHHHHHh-------------CCCCEEEECHHHHhhhhcChHHHHHH
Q ss_pred --HHHHHHHCCCeEccc
Q 028948 135 --YVRLVKSAGLKAKPK 149 (201)
Q Consensus 135 --lI~~~~~~Gf~v~pE 149 (201)
+|..+++.|++|..|
T Consensus 223 ~~ii~la~~lg~~vvAE 239 (294)
T 2r6o_A 223 TTILALARGLGMEVVAE 239 (294)
T ss_dssp HHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHCCCEEEEe
No 375
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=42.14 E-value=68 Score=26.74 Aligned_cols=79 Identities=8% Similarity=-0.007 Sum_probs=51.8
Q ss_pred HHHHHHHhhccc--ccEEEeeCccccccChhHHHHHHHHHHhCCceecC-c-cHHH-------------HHHHhCCchHH
Q 028948 42 VLEDIFESMGQF--VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G-DWAE-------------HLIRNGPSAFK 104 (201)
Q Consensus 42 ~l~DlLe~ag~y--ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~-G-tlfE-------------~al~qg~~~~~ 104 (201)
.+++.|+.+++. .|.+=+.+-... ...+++.-++++++|+.+.. . .+|- ....+.-+.++
T Consensus 34 ~~~e~l~~aa~~~G~~~VEl~~~~~~---~~~~~~l~~~l~~~Gl~i~~~~~~~~~~~~~~g~l~~~d~~~r~~~i~~~~ 110 (333)
T 3ktc_A 34 STIDQINAAKEVGELSYVDLPYPFTP---GVTLSEVKDALKDAGLKAIGITPEIYLQKWSRGAFTNPDPAARAAAFELMH 110 (333)
T ss_dssp CHHHHHHHHHHHSSEEEEEEEESCST---TCCHHHHHHHHHHHTCEEEEEEECTTSGGGTTCSTTCSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCEEEecCCCcc---hhHHHHHHHHHHHcCCeEEEEecCcCcccccCCCCCCcCHHHHHHHHHHHH
Confidence 667777777777 777776522111 23488888999999998753 2 2221 00111112578
Q ss_pred HHHHHHHHcCCCEEEecCC
Q 028948 105 EYVEDCKQVGFDTIELNVG 123 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdG 123 (201)
+.++.|++||.+.|=+--|
T Consensus 111 ~~i~~A~~LGa~~vv~~~g 129 (333)
T 3ktc_A 111 ESAGIVRELGANYVKVWPG 129 (333)
T ss_dssp HHHHHHHHHTCSEEEECCT
T ss_pred HHHHHHHHhCCCEEEECCC
Confidence 8999999999999988766
No 376
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=42.01 E-value=42 Score=26.87 Aligned_cols=50 Identities=16% Similarity=0.177 Sum_probs=32.7
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcc---------cCChhHHH---HHHHHHHHC--CCeEcc
Q 028948 99 GPSAFKEYVEDCKQVGFDTIELNVGSL---------EIPEETLL---RYVRLVKSA--GLKAKP 148 (201)
Q Consensus 99 g~~~~~eyl~~~k~lGFd~IEISdGti---------~i~~~~r~---~lI~~~~~~--Gf~v~p 148 (201)
|...++++++.+++.|++.|=|+|=.. .++.++.. +-++.+++. |+++.+
T Consensus 14 G~~~~ee~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~i~i~~ 77 (267)
T 2yxo_A 14 AEGHPEAYLEEARAKGLKGVVFTDHSPMPPWYDPESRMRLEALPFYLLALERVRERAQDLYVGI 77 (267)
T ss_dssp CCSCHHHHHHHHHHTTCSEEEEEEECCCCTTSSGGGSCCGGGHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCHHHHHHHHHHcCCCEEEEcCCCCCCcccCccccccHHHHHHHHHHHHHHHHHhcCCcEEE
Confidence 445788999999999999999987432 12233333 334555443 888754
No 377
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=41.59 E-value=19 Score=28.88 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChh---HHHHHHHHHHHCCCeE
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEE---TLLRYVRLVKSAGLKA 146 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~---~r~~lI~~~~~~Gf~v 146 (201)
.+++.++.+++.| ..|||+.+++.-+.. ...++++.+++.|+.+
T Consensus 173 ~~~~~l~~~~~~g-~~iEvn~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 219 (267)
T 2yxo_A 173 LAEPALRAVAEAG-LFLDVNTAGLRRPAKEVYPAPALLRRARELGIGL 219 (267)
T ss_dssp HHHHHHHHHHHHT-CEEEEEGGGGGSTTCSCBSCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHcC-CEEEEEchHhcCCCCCCCCCHHHHHHHHHcCCCE
Confidence 3678899999999 599999988754321 2357899999999987
No 378
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=41.59 E-value=58 Score=32.35 Aligned_cols=78 Identities=10% Similarity=0.070 Sum_probs=50.1
Q ss_pred hhHHHHHHHhh-cccccEEEeeC-----------ccccccChhHHHHHHHHHHhC-CceecC-ccHHHHHHHhCCchHHH
Q 028948 40 HNVLEDIFESM-GQFVDGLKFSG-----------GSHSLMPKPFIEEVVKRAHQH-DVYVST-GDWAEHLIRNGPSAFKE 105 (201)
Q Consensus 40 ~~~l~DlLe~a-g~yID~lKfg~-----------GTs~l~p~~~L~eKI~l~~~~-gV~v~~-GtlfE~al~qg~~~~~e 105 (201)
+..+.++.+.+ ....|+|=+-+ |++.....+.+.+.++-.++. ++++.. .. .+...+.+
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~-------~~~~~~~~ 719 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT-------PNVTDIVS 719 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEEC-------SCSSCHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeC-------CChHHHHH
Confidence 34444444444 23466666644 455556778899999999887 665543 11 01124677
Q ss_pred HHHHHHHcCCCEEEecCCc
Q 028948 106 YVEDCKQVGFDTIELNVGS 124 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGt 124 (201)
+.+.+.+.|.|.|-+||.+
T Consensus 720 ~a~~~~~~G~d~i~v~Nt~ 738 (1025)
T 1gte_A 720 IARAAKEGGADGVTATNTV 738 (1025)
T ss_dssp HHHHHHHHTCSEEEECCCE
T ss_pred HHHHHHHcCCCEEEEeccc
Confidence 7888899999999998754
No 379
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A {Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A* 3n18_A* 3n1a_A*
Probab=41.37 E-value=28 Score=30.09 Aligned_cols=54 Identities=11% Similarity=0.136 Sum_probs=38.2
Q ss_pred hhHHHHHHHHHHhCCceecC--ccHHHHHHHhCCc----hHHHHHHHHHHcCCCEEEecC
Q 028948 69 KPFIEEVVKRAHQHDVYVST--GDWAEHLIRNGPS----AFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 69 ~~~L~eKI~l~~~~gV~v~~--GtlfE~al~qg~~----~~~eyl~~~k~lGFd~IEISd 122 (201)
.+.+.+.|..+|+.|++|.. |||--......+. -++..++.+++.|||.|.|.=
T Consensus 58 ~~~~~~~i~~~k~~g~kvllsiGG~~~s~~~~~~~~r~~fi~si~~~~~~~gfDGiDiDw 117 (333)
T 3n12_A 58 DADFKSDISYLKSKGKKVVLSIGGQNGVVLLPDNAAKDRFINSIQSLIDKYGFDGIDIDL 117 (333)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEESTTCCCCCCSHHHHHHHHHHHHHHHHHHCCSEEEEEC
T ss_pred hHHHHHHHHHHHhCCCeEEEEecCCCCccccCCHHHHHHHHHHHHHHHHHcCCCeEEEec
Confidence 45688999999999998876 7763111111111 366777789999999999863
No 380
>3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A*
Probab=41.19 E-value=38 Score=30.77 Aligned_cols=48 Identities=13% Similarity=0.234 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCccc-------------CC--------hhHHHHHHHHHHHCCCeEccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLE-------------IP--------EETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~-------------i~--------~~~r~~lI~~~~~~Gf~v~pE 149 (201)
.+++.++.+++.||++|-|+-+.-. .. .+...++|+.++++|++|...
T Consensus 85 ~~~~~i~~ik~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIld 153 (458)
T 3qho_A 85 NWEDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLD 153 (458)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEe
Confidence 5889999999999999999722111 11 244567999999999999543
No 381
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=40.62 E-value=1.7e+02 Score=24.95 Aligned_cols=105 Identities=11% Similarity=0.179 Sum_probs=68.4
Q ss_pred ccccEEEeeC-cc----ccccChhHHHHHHHHHHh----CCceecCcc----HHHHHHHhCCc--------hHHHHHHHH
Q 028948 52 QFVDGLKFSG-GS----HSLMPKPFIEEVVKRAHQ----HDVYVSTGD----WAEHLIRNGPS--------AFKEYVEDC 110 (201)
Q Consensus 52 ~yID~lKfg~-GT----s~l~p~~~L~eKI~l~~~----~gV~v~~Gt----lfE~al~qg~~--------~~~eyl~~~ 110 (201)
+=-|+|.+|. +| ..+.+++.+++.+...+. .+++++--| -+|.|+..|.+ ..++.++.+
T Consensus 50 ~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl~aGa~iINdvsg~~d~~~~~~~ 129 (282)
T 1aj0_A 50 AGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGAHIINDIRSLSEPGALEAA 129 (282)
T ss_dssp HTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHTTCCEEEETTTTCSTTHHHHH
T ss_pred CCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHHHcCCCEEEECCCCCCHHHHHHH
Confidence 3357777887 32 344556667665555433 399998754 68888887642 256899999
Q ss_pred HHcCCCEEEecC-Ccc-cCC------------hhHHHHHHHHHHHCCCe---EccccccccCC
Q 028948 111 KQVGFDTIELNV-GSL-EIP------------EETLLRYVRLVKSAGLK---AKPKFAVMFNK 156 (201)
Q Consensus 111 k~lGFd~IEISd-Gti-~i~------------~~~r~~lI~~~~~~Gf~---v~pE~g~k~~~ 156 (201)
++.|...|=.-. |.- ++. .+...+.++++.+.|++ ..-.-|+-|++
T Consensus 130 a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf~k 192 (282)
T 1aj0_A 130 AETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGK 192 (282)
T ss_dssp HHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSC
T ss_pred HHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCccc
Confidence 999999987653 221 110 45567889999999987 34344555544
No 382
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=40.53 E-value=38 Score=29.08 Aligned_cols=71 Identities=18% Similarity=0.330 Sum_probs=43.4
Q ss_pred cChhHHHHHHHHHHhCCc-eecC-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCC
Q 028948 67 MPKPFIEEVVKRAHQHDV-YVST-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV-~v~~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf 144 (201)
++.+.+.+.++.+.+.|+ .++. |++-|--. ...+.+.+.++.+++.|+.. -+++|++ +++ .++++++.|+
T Consensus 99 ~s~eei~~~~~~~~~~g~~~i~~~gg~~~p~~-~~~~~l~~ll~~ik~~g~~i-~~t~G~l--~~e----~l~~L~~aGv 170 (369)
T 1r30_A 99 MEVEQVLESARKAKAAGSTRFCMGAAWKNPHE-RDMPYLEQMVQGVKAMGLEA-CMTLGTL--SES----QAQRLANAGL 170 (369)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEECCSSCCT-TTHHHHHHHHHHHHHTTSEE-EEECSSC--CHH----HHHHHHHHCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEEeCCCCCCc-CCHHHHHHHHHHHHHcCCeE-EEecCCC--CHH----HHHHHHHCCC
Confidence 455667777887778887 4454 34421111 11236888888899888864 4788874 333 3455566676
Q ss_pred e
Q 028948 145 K 145 (201)
Q Consensus 145 ~ 145 (201)
.
T Consensus 171 d 171 (369)
T 1r30_A 171 D 171 (369)
T ss_dssp C
T ss_pred C
Confidence 4
No 383
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN; 1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A* 1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A* 2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A* 1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ...
Probab=40.51 E-value=63 Score=27.82 Aligned_cols=50 Identities=14% Similarity=0.252 Sum_probs=32.5
Q ss_pred HHHHHHHHHhC-CceecC--ccHHH------HHHHhCC----chHHHHHHHHHHcCCCEEEecC
Q 028948 72 IEEVVKRAHQH-DVYVST--GDWAE------HLIRNGP----SAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 72 L~eKI~l~~~~-gV~v~~--GtlfE------~al~qg~----~~~~eyl~~~k~lGFd~IEISd 122 (201)
+++..++-+++ +++|.. |||-. .++ .++ .-++.-++.+++.|||.|.|.=
T Consensus 56 ~~~~~~lk~~~p~lkvllsiGG~~~~s~~f~~~~-~~~~~r~~fi~si~~~~~~~~fDGiDiDw 118 (361)
T 2pi6_A 56 YDTLNTLKNRNPKLKTLLSVGGWNFGPERFSKIA-SKTQSRRTFIKSVPPFLRTHGFDGLDLAW 118 (361)
T ss_dssp HHHHHHHHHHCTTCEEEEEEETTTSCHHHHHHHH-TSHHHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCCeEEEEECCCCCCchhHHHHh-cCHHHHHHHHHHHHHHHHHcCCCeEEEee
Confidence 55566665555 787765 77632 222 121 1466777889999999999973
No 384
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=40.35 E-value=33 Score=28.85 Aligned_cols=50 Identities=12% Similarity=0.091 Sum_probs=34.9
Q ss_pred HHHHHHHHcCCCEEEecCCcc--------cCChhH----HHHHHHHHHHCCCeEcccccccc
Q 028948 105 EYVEDCKQVGFDTIELNVGSL--------EIPEET----LLRYVRLVKSAGLKAKPKFAVMF 154 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti--------~i~~~~----r~~lI~~~~~~Gf~v~pE~g~k~ 154 (201)
+-++.+.+.|++.|-|+...- ..+.++ -.+.|+.+++.|+.|..+++--+
T Consensus 83 ~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~ 144 (295)
T 1ydn_A 83 KGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVV 144 (295)
T ss_dssp HHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSS
T ss_pred HHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEe
Confidence 456778889999999975322 344433 24568999999999976666544
No 385
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=40.18 E-value=39 Score=30.52 Aligned_cols=27 Identities=15% Similarity=0.330 Sum_probs=24.4
Q ss_pred cCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 126 EIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 126 ~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
-.+.++-.++|+.|+++|..|+||+-.
T Consensus 88 ~YT~~di~eIv~YA~~rgI~VIPEID~ 114 (434)
T 2yl6_A 88 HLTESQMTDLINYAKDKGIGLIPTVNS 114 (434)
T ss_dssp CEEHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 578999999999999999999999754
No 386
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=40.05 E-value=61 Score=27.46 Aligned_cols=69 Identities=17% Similarity=0.172 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCe-EccccccccCCC-----------CcccccccccccE
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKFAVMFNKS-----------DIPSDRDRAFGAY 170 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~-v~pE~g~k~~~~-----------dl~ag~~~a~g~~ 170 (201)
+.++-+.+++.|.+.+-+| .+..+.||+....+|. |.|=+|.+-... .+++|++
T Consensus 164 V~~~A~~a~~aG~~GvV~s--------a~e~~~iR~~~g~~fl~VtPGIr~qg~~~~dQ~Rv~t~~~a~~aGad------ 229 (255)
T 3ldv_A 164 VLRLATLTKNAGLDGVVCS--------AQEASLLKQHLGREFKLVTPGIRPAGSEQGDQRRIMTPAQAIASGSD------ 229 (255)
T ss_dssp HHHHHHHHHHTTCSEEECC--------HHHHHHHHHHHCTTSEEEEECCCCTTSTTSSCSSSCCHHHHHHTTCS------
T ss_pred HHHHHHHHHHcCCCEEEEC--------HHHHHHHHHhcCCCcEEEeCCcccCcCCccceeccCCHHHHHHcCCC------
Confidence 4455566778899888877 2346788888878885 679666553321 1334444
Q ss_pred EEecccCcCeeccccCCc
Q 028948 171 VARAPRSTDKLFLASNPE 188 (201)
Q Consensus 171 Vi~E~Res~~v~~~~~~~ 188 (201)
+++-+|. ++-+.||.
T Consensus 230 ~iVvGr~---I~~a~dp~ 244 (255)
T 3ldv_A 230 YLVIGRP---ITQAAHPE 244 (255)
T ss_dssp EEEECHH---HHTCSCHH
T ss_pred EEEECHH---HhCCCCHH
Confidence 6777774 55667774
No 387
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=39.95 E-value=42 Score=29.53 Aligned_cols=71 Identities=11% Similarity=0.113 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHC--CCeEcc-ccc-cccCCCCcccccccccccEEEecccC
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKP-KFA-VMFNKSDIPSDRDRAFGAYVARAPRS 177 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~--Gf~v~p-E~g-~k~~~~dl~ag~~~a~g~~Vi~E~Re 177 (201)
...+.++.+.+.|++.|||+-+. . .++...++|+.+++. ++.|.. .+. .+....-.++|+| +|++ +-+
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~-g-~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad-----~I~v-g~~ 224 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAH-G-HSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGAD-----CLKV-GIG 224 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC-C-SSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCS-----EEEE-CSS
T ss_pred hHHHHHHHHHHCCCCEEEEeCCC-C-ChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCC-----EEEE-CCC
Confidence 34566778888999999994332 1 235566888888887 777763 111 1112233456777 8888 444
Q ss_pred cCe
Q 028948 178 TDK 180 (201)
Q Consensus 178 s~~ 180 (201)
.|+
T Consensus 225 ~G~ 227 (404)
T 1eep_A 225 PGS 227 (404)
T ss_dssp CST
T ss_pred CCc
Confidence 443
No 388
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=39.80 E-value=83 Score=27.27 Aligned_cols=58 Identities=7% Similarity=0.047 Sum_probs=41.0
Q ss_pred ceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeE
Q 028948 84 VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 84 V~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
+.+.++.-. ...| ..++..+.+++.|+++++++++.-.=+.+.-.++++.+++.+..+
T Consensus 34 ~livtd~~~---~~~g--~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~ 91 (386)
T 1rrm_A 34 ALIVTDKTL---VQCG--VVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNSGADY 91 (386)
T ss_dssp EEEECBHHH---HHTT--HHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHHTCSE
T ss_pred EEEEECcch---hhch--HHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCcCE
Confidence 555666321 2234 566777777788888888887777777788888888888887766
No 389
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=39.71 E-value=1.7e+02 Score=24.67 Aligned_cols=90 Identities=21% Similarity=0.175 Sum_probs=0.0
Q ss_pred hHHHHHHHhhcccccEEEeeCc----------cccccChhHHHHHHHHHHhCCceecC--ccHHHHHHHhCCchHHHHHH
Q 028948 41 NVLEDIFESMGQFVDGLKFSGG----------SHSLMPKPFIEEVVKRAHQHDVYVST--GDWAEHLIRNGPSAFKEYVE 108 (201)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~G----------Ts~l~p~~~L~eKI~l~~~~gV~v~~--GtlfE~al~qg~~~~~eyl~ 108 (201)
...+.+-+....-.|.+|+-.. ....++.+.+++.++.+|++|+++.. .+.-+ ++
T Consensus 176 ~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~-------------i~ 242 (426)
T 2r8c_A 176 EVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAYTPAA-------------IA 242 (426)
T ss_dssp HHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEECSHHH-------------HH
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeCChHH-------------HH
Q ss_pred HHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 109 DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 109 ~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.+.+.|.+.||=..-.-+ +.++++++.|..+.|.+
T Consensus 243 ~al~~G~~~i~H~~~~~~-------~~~~~~~~~gv~~~pt~ 277 (426)
T 2r8c_A 243 RAVRCGVRTIEHGNLIDD-------ETARLVAEHGAYVVPTL 277 (426)
T ss_dssp HHHHTTCSEEEECTTCCH-------HHHHHHHHTTCEEECCT
T ss_pred HHHHcCCCEEecCCcCCH-------HHHHHHHHcCCeEeech
No 390
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=39.71 E-value=1.2e+02 Score=27.15 Aligned_cols=111 Identities=9% Similarity=0.068 Sum_probs=66.6
Q ss_pred CCCceeEecCCCCCCcchhHHH---HHHHhhcccccEEEeeCccccccC---hhH--HHHHHHHHHhCCceecCc-cHHH
Q 028948 23 RFGVTEMRSPHYTLSSSHNVLE---DIFESMGQFVDGLKFSGGSHSLMP---KPF--IEEVVKRAHQHDVYVSTG-DWAE 93 (201)
Q Consensus 23 ~~GlTmV~DkG~s~~~g~~~l~---DlLe~ag~yID~lKfg~GTs~l~p---~~~--L~eKI~l~~~~gV~v~~G-tlfE 93 (201)
.+|.-+++-+|+.. .+.+.. +++...|.- +++=.==|++. || .+. |+..-.+-+.++++|+.. |--
T Consensus 247 ~~gkPVilk~G~~~--t~~e~~~Ave~i~~~Gn~-~i~L~~rG~s~-yp~~~~~~ldl~~i~~lk~~~~lpV~~D~th~- 321 (385)
T 3nvt_A 247 RVDKPILLKRGLSA--TIEEFIGAAEYIMSQGNG-KIILCERGIRT-YEKATRNTLDISAVPILKKETHLPVMVDVTHS- 321 (385)
T ss_dssp TSSSCEEEECCTTC--CHHHHHHHHHHHHTTTCC-CEEEEECCBCC-SCCSSSSBCCTTHHHHHHHHBSSCEEEEHHHH-
T ss_pred ccCCcEEEecCCCC--CHHHHHHHHHHHHHcCCC-eEEEEECCCCC-CCCCCccccCHHHHHHHHHhcCCCEEEcCCCC-
Confidence 35777999999722 223333 333344531 23322224443 22 222 444334444589888764 421
Q ss_pred HHHHhC-CchHHHHHHHHHHcCCC--EEEe--------cCCcccCChhHHHHHHHHHHHC
Q 028948 94 HLIRNG-PSAFKEYVEDCKQVGFD--TIEL--------NVGSLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 94 ~al~qg-~~~~~eyl~~~k~lGFd--~IEI--------SdGti~i~~~~r~~lI~~~~~~ 142 (201)
-| ++-+..--..+..+|.+ .||. ||+..+|++++..++++.+++-
T Consensus 322 ----~G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~~D~~~sl~p~el~~lv~~i~~i 377 (385)
T 3nvt_A 322 ----TGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDSAQQMDIPEFEEFWNAILAS 377 (385)
T ss_dssp ----HCCGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCSSCTTTSBCHHHHHHHHHHHHHH
T ss_pred ----CCccchHHHHHHHHHHhCCCEEEEEecCChhhcCCcccccCCHHHHHHHHHHHHHH
Confidence 22 12344445567899999 9998 9999999999999999988764
No 391
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=39.66 E-value=30 Score=30.92 Aligned_cols=63 Identities=6% Similarity=-0.010 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHcCCCEEEec--CCcccCChhHHHHHHHHHHHC--CCeEcc-cc-ccccCCCCcccccccccccEEEe
Q 028948 102 AFKEYVEDCKQVGFDTIELN--VGSLEIPEETLLRYVRLVKSA--GLKAKP-KF-AVMFNKSDIPSDRDRAFGAYVAR 173 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEIS--dGti~i~~~~r~~lI~~~~~~--Gf~v~p-E~-g~k~~~~dl~ag~~~a~g~~Vi~ 173 (201)
...++++.+.+.|+|.|+|. .|. + +.-.+.|+.+++. +..|.. .+ .......-+++|+| .|.+
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~G~---~-~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD-----~I~V 168 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAHAH---A-KYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGAD-----IIKA 168 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSCCS---S-HHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCS-----EEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCC---c-HhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCC-----EEEE
Confidence 46678899999999999994 553 2 2334678888876 666654 11 11112234567777 7777
No 392
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A* 1ll6_A
Probab=39.46 E-value=85 Score=27.42 Aligned_cols=50 Identities=16% Similarity=0.298 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhC-CceecC--ccHHH-----HHHHhCC----chHHHHHHHHHHcCCCEEEec
Q 028948 71 FIEEVVKRAHQH-DVYVST--GDWAE-----HLIRNGP----SAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 71 ~L~eKI~l~~~~-gV~v~~--GtlfE-----~al~qg~----~~~~eyl~~~k~lGFd~IEIS 121 (201)
.+++...|-+++ +++|.. |||-. .++ ..+ .-++.-++.+++.|||.|.|.
T Consensus 73 ~~~~l~~lk~~~~~lKvllsiGG~~~s~~f~~~~-~~~~~r~~fi~siv~~l~~~~fDGiDiD 134 (392)
T 1ll7_A 73 CIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPA-STEEGRKKFADTSLKLMKDLGFDGIDID 134 (392)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEEHHHHGGGSHHHH-TSHHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEeCCCCCchHhHHh-CCHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 366666665554 787765 77742 122 111 146677788999999999997
No 393
>4ac1_X Endo-N-acetyl-beta-D-glucosaminidase; hydrolase, glycoside hydrolase family 18, deglycosylation; HET: NAG; 1.30A {Hypocrea jecorina}
Probab=39.32 E-value=84 Score=26.51 Aligned_cols=70 Identities=13% Similarity=0.178 Sum_probs=45.1
Q ss_pred HHHHHHHHHHhCCceecC--ccHHHHH---HH---hCCchHH----HHHHHHHHcCCCEEEecCCcccCChhHHHHHHHH
Q 028948 71 FIEEVVKRAHQHDVYVST--GDWAEHL---IR---NGPSAFK----EYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRL 138 (201)
Q Consensus 71 ~L~eKI~l~~~~gV~v~~--GtlfE~a---l~---qg~~~~~----eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~ 138 (201)
.|.+.|..+|+.|++|.. |||-.-. .. ..+..++ ...+.+++.|||.|.|.--. ..+.+...++|++
T Consensus 63 ~l~~~i~~~q~~g~KvllsiGG~~~g~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~dG~D~d~e~-~~~~~~~~~li~~ 141 (283)
T 4ac1_X 63 TLWNETITMKQAGVKVMGMVGGAAPGSFNTQTLDSPDSATFEHYYGQLRDAIVNFQLEGMDLDVEQ-PMSQQGIDRLIAR 141 (283)
T ss_dssp HHHHHHHHHHHTTCEEEEEEETTSSCSSSTTTTTCSSHHHHHHHHHHHHHHHHHTTCSEEEEECCS-CBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEcCCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCceEeeccc-CCCHHHHHHHHHH
Confidence 488889999999998875 7773210 00 0111233 44567888999999987432 2345567778877
Q ss_pred HHH
Q 028948 139 VKS 141 (201)
Q Consensus 139 ~~~ 141 (201)
.++
T Consensus 142 Lr~ 144 (283)
T 4ac1_X 142 LRA 144 (283)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 394
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase, hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5 d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A* 2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A* 1wno_A*
Probab=39.29 E-value=83 Score=28.14 Aligned_cols=49 Identities=20% Similarity=0.348 Sum_probs=31.9
Q ss_pred HHHHHHHHHhC-CceecC--ccH-----HHHHHHhCC----chHHHHHHHHHHcCCCEEEec
Q 028948 72 IEEVVKRAHQH-DVYVST--GDW-----AEHLIRNGP----SAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 72 L~eKI~l~~~~-gV~v~~--Gtl-----fE~al~qg~----~~~~eyl~~~k~lGFd~IEIS 121 (201)
+++...+-+++ +++|.. ||| |..++. .+ .-++.-++.+++.|||.|.|.
T Consensus 115 ~~~l~~lK~~~~~lKvllsiGGw~~s~~fs~~~~-~~~~R~~fi~siv~~l~~~gfDGIDiD 175 (433)
T 1w9p_A 115 IKQLYLLKKQNRNLKVLLSIGGWTYSPNFAPAAS-TDAGRKNFAKTAVKLLQDLGFDGLDID 175 (433)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECTTTGGGHHHHHT-SHHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEeCCCCCcchhhHhc-CHHHHHHHHHHHHHHHHhcCcCceeEE
Confidence 56666665554 787765 766 333221 11 146677788999999999997
No 395
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=39.20 E-value=36 Score=29.29 Aligned_cols=62 Identities=10% Similarity=0.068 Sum_probs=46.4
Q ss_pred CCceecCccHHHHHHH---------hCCchHHHHHHHHHHcCCCE-EEecCCcccCChhHHHHHHHHHHHC-CCeEc
Q 028948 82 HDVYVSTGDWAEHLIR---------NGPSAFKEYVEDCKQVGFDT-IELNVGSLEIPEETLLRYVRLVKSA-GLKAK 147 (201)
Q Consensus 82 ~gV~v~~GtlfE~al~---------qg~~~~~eyl~~~k~lGFd~-IEISdGti~i~~~~r~~lI~~~~~~-Gf~v~ 147 (201)
+|+++|+- +-|..-. -.+....+.+++|-+.|... |.++.|+ +.++..++++.+++. |+.+.
T Consensus 55 ~G~~vy~s-l~el~~~~~vD~avI~vP~~~~~~~~~e~i~~Gi~~iv~~t~G~---~~~~~~~l~~~a~~~~gi~li 127 (305)
T 2fp4_A 55 LGLPVFNT-VKEAKEQTGATASVIYVPPPFAAAAINEAIDAEVPLVVCITEGI---PQQDMVRVKHRLLRQGKTRLI 127 (305)
T ss_dssp TTEEEESS-HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHTTCSEEEECCCCC---CHHHHHHHHHHHTTCSSCEEE
T ss_pred CCeeeech-HHHhhhcCCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCC---ChHHHHHHHHHHHhcCCcEEE
Confidence 67777762 3333221 12346789999999999999 7999987 556667899999999 99984
No 396
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii}
Probab=39.20 E-value=1.2e+02 Score=25.22 Aligned_cols=141 Identities=14% Similarity=0.160 Sum_probs=74.7
Q ss_pred CceeEecCCCCCCcchhHHHHHHHhhccc-ccEEEeeCccccccChhHHHHHHHHHHhCC---------c--eecCc--c
Q 028948 25 GVTEMRSPHYTLSSSHNVLEDIFESMGQF-VDGLKFSGGSHSLMPKPFIEEVVKRAHQHD---------V--YVSTG--D 90 (201)
Q Consensus 25 GlTmV~DkG~s~~~g~~~l~DlLe~ag~y-ID~lKfg~GTs~l~p~~~L~eKI~l~~~~g---------V--~v~~G--t 90 (201)
|...++|=-+ .-=++..+...+.+.++ +|++=+ ++....+.++.-++.+++++ | -++.. .
T Consensus 59 g~~iflDlK~--~DI~nTv~~~~~~~~~~gad~vTv----h~~~G~~~~~~a~~~~~~~~~~~~~~l~~Vt~LTS~~~~~ 132 (239)
T 3tr2_A 59 GYRIFLDLKF--YDIPQTVAGACRAVAELGVWMMNI----HISGGRTMMETVVNALQSITLKEKPLLIGVTILTSLDGSD 132 (239)
T ss_dssp TCCEEEEEEE--CSCHHHHHHHHHHHHHTTCSEEEE----EGGGCHHHHHHHHHHHHTCCCSSCCEEEEECSCTTCCHHH
T ss_pred CCCEEEEecc--cccchHHHHHHHHHHhCCCCEEEE----eccCCHHHHHHHHHHHHhcCcCCCceEEEEEEEeeCCHHH
Confidence 4445555443 00234444444555555 566544 33556677888888888763 2 12222 3
Q ss_pred HHHHHHHhC-CchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCe-EccccccccCC-----------C
Q 028948 91 WAEHLIRNG-PSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK-AKPKFAVMFNK-----------S 157 (201)
Q Consensus 91 lfE~al~qg-~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~-v~pE~g~k~~~-----------~ 157 (201)
|-|.-+... .+.+.++-+.+++.|.+.+-.|. .....||+....+|. |.|=+|-+-.. .
T Consensus 133 l~~~g~~~~~~~~v~~~A~~a~~~g~~GvV~s~--------~e~~~ir~~~~~~fl~vtPGIr~~g~~~~dQ~rv~t~~~ 204 (239)
T 3tr2_A 133 LKTLGIQEKVPDIVCRMATLAKSAGLDGVVCSA--------QEAALLRKQFDRNFLLVTPGIRLETDEKGDQKRVMTPRA 204 (239)
T ss_dssp HHHTTCCSCHHHHHHHHHHHHHHHTCCEEECCH--------HHHHHHHTTCCTTSEEEECCBC----------CCBCHHH
T ss_pred HHhcCCCCCHHHHHHHHHHHHHHcCCCEEEECc--------hhHHHHHHhcCCCcEEECCCcCCCCCCcCcccccCCHHH
Confidence 543211110 02455566677888999887772 234567776666774 67966655322 1
Q ss_pred CcccccccccccEEEecccCcCeeccccCCc
Q 028948 158 DIPSDRDRAFGAYVARAPRSTDKLFLASNPE 188 (201)
Q Consensus 158 dl~ag~~~a~g~~Vi~E~Res~~v~~~~~~~ 188 (201)
-+.+|+| +++-+|. ++-++||.
T Consensus 205 ~~~aGad------~lVvGr~---I~~a~dp~ 226 (239)
T 3tr2_A 205 AIQAGSD------YLVIGRP---ITQSTDPL 226 (239)
T ss_dssp HHHHTCS------EEEECHH---HHTSSSHH
T ss_pred HHHcCCC------EEEEChH---HhCCCCHH
Confidence 1345555 6777773 55667774
No 397
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=39.15 E-value=54 Score=27.28 Aligned_cols=48 Identities=21% Similarity=0.290 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHcCCCEEEecC-----------CcccCChhHHHHHHHHHHHCCCeEccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNV-----------GSLEIPEETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISd-----------Gti~i~~~~r~~lI~~~~~~Gf~v~pE 149 (201)
.+.+.+++..+.|.+.|.+-. +...++.++..++++.+++.|+.|...
T Consensus 168 ~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H 226 (403)
T 3gnh_A 168 EARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAH 226 (403)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEE
Confidence 445556666667888888763 456789999999999999999998554
No 398
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=38.98 E-value=84 Score=25.89 Aligned_cols=75 Identities=15% Similarity=0.271 Sum_probs=50.3
Q ss_pred ccEEEee-CccccccChhHHHHHHHHHHhCCceec--C-ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc---
Q 028948 54 VDGLKFS-GGSHSLMPKPFIEEVVKRAHQHDVYVS--T-GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE--- 126 (201)
Q Consensus 54 ID~lKfg-~GTs~l~p~~~L~eKI~l~~~~gV~v~--~-GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~--- 126 (201)
++.+-|. +|--.++|. +.+.++.++++|+.+. | |++- +.+++||.+.|-||--+.+
T Consensus 128 ~~~i~~s~gGEPll~~~--l~~li~~~~~~g~~~~l~TNG~~~---------------~~l~~L~~~~v~isld~~~~~~ 190 (311)
T 2z2u_A 128 PKHVAISLSGEPTLYPY--LDELIKIFHKNGFTTFVVSNGILT---------------DVIEKIEPTQLYISLDAYDLDS 190 (311)
T ss_dssp CCEEEECSSSCGGGSTT--HHHHHHHHHHTTCEEEEEECSCCH---------------HHHHHCCCSEEEEECCCSSTTT
T ss_pred CCEEEEeCCcCccchhh--HHHHHHHHHHCCCcEEEECCCCCH---------------HHHHhCCCCEEEEEeecCCHHH
Confidence 3567787 577777664 9999999999997544 4 4431 1233558888888855531
Q ss_pred ---------CChhHHHHHHHHHHHCCCeE
Q 028948 127 ---------IPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 127 ---------i~~~~r~~lI~~~~~~Gf~v 146 (201)
-+.+.-++.|+.+++.| .+
T Consensus 191 ~~~i~~~~~~~~~~v~~~i~~l~~~g-~v 218 (311)
T 2z2u_A 191 YRRICGGKKEYWESILNTLDILKEKK-RT 218 (311)
T ss_dssp C----CCCHHHHHHHHHHHHHHTTSS-SE
T ss_pred HHHHhCCccchHHHHHHHHHHHHhcC-CE
Confidence 13456677788888887 44
No 399
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=38.89 E-value=73 Score=26.61 Aligned_cols=39 Identities=10% Similarity=0.044 Sum_probs=26.5
Q ss_pred CCchHHH---HHHHHHHcCCCEEEecCCcc----cCChhHHHHHHH
Q 028948 99 GPSAFKE---YVEDCKQVGFDTIELNVGSL----EIPEETLLRYVR 137 (201)
Q Consensus 99 g~~~~~e---yl~~~k~lGFd~IEISdGti----~i~~~~r~~lI~ 137 (201)
|+..+++ +++.|.+.|++.|=+++=+. .-+.++..+.++
T Consensus 15 G~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~ 60 (262)
T 3qy7_A 15 GAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAAD 60 (262)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHH
Confidence 3445665 99999999999999988663 334444444333
No 400
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=38.78 E-value=67 Score=26.16 Aligned_cols=17 Identities=12% Similarity=0.110 Sum_probs=14.6
Q ss_pred hHHHHHHHHHHcCCCEE
Q 028948 102 AFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~I 118 (201)
.+++.+++|++.|+.+|
T Consensus 78 ~ld~~v~~a~~~Gi~vi 94 (291)
T 1egz_A 78 KVERVVDAAIANDMYAI 94 (291)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
Confidence 68888999999999876
No 401
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A*
Probab=38.74 E-value=14 Score=31.46 Aligned_cols=91 Identities=11% Similarity=0.140 Sum_probs=56.4
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCcc-HHHHHHHhCCchHHHHHHHHHHcCCCE
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGD-WAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~Gt-lfE~al~qg~~~~~eyl~~~k~lGFd~ 117 (201)
......++++..++|++++|+|.--..-+.. +-|+.++++|..+..-- +..+ |+-+..|.+.+.++|.|.
T Consensus 38 ~~~~al~l~~~l~~~v~~~KvG~~l~~~~G~----~~v~~Lk~~g~~VflDlK~~DI-----pnTv~~a~~~~~~~gaD~ 108 (255)
T 3ldv_A 38 NLADALAFVDKIDPSTCRLKVGKEMFTLFGP----DFVRELHKRGFSVFLDLKFHDI-----PNTCSKAVKAAAELGVWM 108 (255)
T ss_dssp SHHHHHHHHTTSCGGGCEEEEEHHHHHHHHH----HHHHHHHHTTCCEEEEEEECSC-----HHHHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHhCCcCcEEEeCHHHHHhhCH----HHHHHHHhcCCCEEEEEecccc-----hhHHHHHHHHHHhcCCCE
Confidence 7778999999999999999999744433333 34455566676665431 2111 223455666677888888
Q ss_pred EEecCCcccCChhHHHHHHHHHHH
Q 028948 118 IELNVGSLEIPEETLLRYVRLVKS 141 (201)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~ 141 (201)
|-|.- ....+....+++.+++
T Consensus 109 vTVh~---~~G~~~~~~a~~~~~~ 129 (255)
T 3ldv_A 109 VNVHA---SGGERMMAASREILEP 129 (255)
T ss_dssp EEEEG---GGCHHHHHHHHHHHGG
T ss_pred EEEec---cCCHHHHHHHHHHHhh
Confidence 88853 2334444455555544
No 402
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=38.74 E-value=51 Score=27.48 Aligned_cols=87 Identities=10% Similarity=0.046 Sum_probs=55.9
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHC---------CCeEccccccccCCC---CcccccccccccEE
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA---------GLKAKPKFAVMFNKS---DIPSDRDRAFGAYV 171 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~---------Gf~v~pE~g~k~~~~---dl~ag~~~a~g~~V 171 (201)
+.|++.+.+.|.|.|-|-.+..+ +..++++.+++. |.++-..+.-..+.+ ++..+.| +|
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~~----~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp~~~l~~~l~~~D-----~v 152 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQYH----DFALTIEWLAKQKTTYANQVYPVLIGACLCPETPISELEPYLDQID-----VI 152 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCTT----SHHHHHHHHTTCEEEETTEEEECEEEEEECTTSCGGGGTTTTTTCS-----EE
T ss_pred HHHHHHHHHcCCCEEEEecCCcc----cHHHHHHHHHhcccccccccCCceEEEEEeCCChHHHHHHHhhcCc-----ee
Confidence 78999999999999998887753 356889999999 888755443222222 2224666 77
Q ss_pred Ee---cccCcCeecc-------------cc----CCceeeeecccccc
Q 028948 172 AR---APRSTDKLFL-------------AS----NPEIEVGVGINKSR 199 (201)
Q Consensus 172 i~---E~Res~~v~~-------------~~----~~~~~~~~~~~~~~ 199 (201)
.+ ++--.|.-+. .+ |-.|+|.-|||.+.
T Consensus 153 lvMsv~pgfggq~f~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~~~~ 200 (237)
T 3cu2_A 153 QLLTLDPRNGTKYPSELILDRVIQVEKRLGNRRVEKLINIDGSMTLEL 200 (237)
T ss_dssp EEESEETTTTEECCHHHHHHHHHHHHHHHGGGGGGCEEEEESSCCHHH
T ss_pred eeeeeccCcCCeecChhHHHHHHHHHHHHHhcCCCceEEEECCcCHHH
Confidence 54 5543333221 11 34588888888654
No 403
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=37.91 E-value=34 Score=28.19 Aligned_cols=63 Identities=14% Similarity=0.175 Sum_probs=43.3
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccccccc-CCCCcccccccccccEEEec
Q 028948 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMF-NKSDIPSDRDRAFGAYVARA 174 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~-~~~dl~ag~~~a~g~~Vi~E 174 (201)
-++++.+.|.|.|-+... .-.+++...++++.+++.|+.+.+++.-.. ...-.++|++ +|.+.
T Consensus 93 ~i~~~~~aGad~I~l~~~-~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad-----~Ig~~ 156 (229)
T 3q58_A 93 DVDALAQAGADIIAFDAS-FRSRPVDIDSLLTRIRLHGLLAMADCSTVNEGISCHQKGIE-----FIGTT 156 (229)
T ss_dssp HHHHHHHHTCSEEEEECC-SSCCSSCHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCS-----EEECT
T ss_pred HHHHHHHcCCCEEEECcc-ccCChHHHHHHHHHHHHCCCEEEEecCCHHHHHHHHhCCCC-----EEEec
Confidence 367789999999976544 444556777999999999999987654221 1233556777 77654
No 404
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=37.90 E-value=22 Score=32.24 Aligned_cols=77 Identities=10% Similarity=0.068 Sum_probs=49.9
Q ss_pred hHHHHHHHhhcccccEEEeeCccccccCh-------hHHHHHHHHHHhCCceecCc---cHHHHHHHhCCchHHHHHHHH
Q 028948 41 NVLEDIFESMGQFVDGLKFSGGSHSLMPK-------PFIEEVVKRAHQHDVYVSTG---DWAEHLIRNGPSAFKEYVEDC 110 (201)
Q Consensus 41 ~~l~DlLe~ag~yID~lKfg~GTs~l~p~-------~~L~eKI~l~~~~gV~v~~G---tlfE~al~qg~~~~~eyl~~~ 110 (201)
....++|+.|+.| +.|-=| ||.+.|+ +.+++.+++||++|..+..- ..|+.+=..- +-+...
T Consensus 17 ~~~~~yi~~a~~~--Gf~~IF-TSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~-----~dl~~~ 88 (372)
T 2p0o_A 17 NDTIIYIKKMKAL--GFDGIF-TSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSF-----DELEPL 88 (372)
T ss_dssp HHHHHHHHHHHHT--TCCEEE-EEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBT-----TBCHHH
T ss_pred HHHHHHHHHHHHC--CCCEEE-ccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCH-----HHHHHH
Confidence 4555788888765 111112 5566554 45788889999999988763 3555542221 224466
Q ss_pred HHcCCCEEEecCCcc
Q 028948 111 KQVGFDTIELNVGSL 125 (201)
Q Consensus 111 k~lGFd~IEISdGti 125 (201)
+++|++.|-+..|+-
T Consensus 89 ~~lGi~glRLD~Gf~ 103 (372)
T 2p0o_A 89 IELGVTGLRMDYGIT 103 (372)
T ss_dssp HHHTCCEEEECSSCC
T ss_pred HHcCCCEEEEcCCCC
Confidence 888999999999984
No 405
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=37.77 E-value=27 Score=28.97 Aligned_cols=65 Identities=11% Similarity=0.008 Sum_probs=51.1
Q ss_pred HHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 77 KRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 77 ~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
+++++.|| .+. .|-..++|+.+- ..+ +.++||+++=++|.+-+.+++.....++..+..|-.|.+
T Consensus 152 ~~L~~~gi~~lvi~G~~T~~CV~~T--a~d-----a~~~Gy~V~vv~Da~as~~~~~h~~aL~~m~~~~a~v~t 218 (236)
T 3ot4_A 152 AWLAQRGVQTLLVAGATTSGCVRAS--VVD-----AMSAGFRPLVLSDCVGDRALGPHEANLFDMRQKYAAVMT 218 (236)
T ss_dssp HHHHHTTCCEEEEEESCTTTHHHHH--HHH-----HHHHTCEEEEEEEEECCSCHHHHHHHHHHHHHHTSEEEC
T ss_pred HHHHHCCCCEEEEeCccCcHHHHHH--HHH-----HHHCCCEEEEechhcCCCCHHHHHHHHHHHHhcCCEEee
Confidence 34567788 333 477888888875 433 567899999999999999999999999999888877644
No 406
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=37.77 E-value=2e+02 Score=24.99 Aligned_cols=88 Identities=10% Similarity=0.055 Sum_probs=49.9
Q ss_pred ccEEEeeCccc--cccChhHHHHHHHHHHhCCceecC---c-cHH----HHHHHhCCc----------------hHHHHH
Q 028948 54 VDGLKFSGGSH--SLMPKPFIEEVVKRAHQHDVYVST---G-DWA----EHLIRNGPS----------------AFKEYV 107 (201)
Q Consensus 54 ID~lKfg~GTs--~l~p~~~L~eKI~l~~~~gV~v~~---G-tlf----E~al~qg~~----------------~~~eyl 107 (201)
.+.+|+..+.. .-.+.+.+++-++.++++|..+.. . ... +.+..+|.. .+++.+
T Consensus 172 ~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~ 251 (501)
T 2vm8_A 172 VNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAI 251 (501)
T ss_dssp CCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHH
T ss_pred ceEEEEeeccCCCCCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHH
Confidence 46777765422 234567788888999988887653 2 221 122222211 334555
Q ss_pred HHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeE
Q 028948 108 EDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 108 ~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
+.++..|... -+...+ ..+-.++|+.+++.|..|
T Consensus 252 ~l~~~~g~~~-hi~h~~----~~~~~~~i~~~~~~G~~v 285 (501)
T 2vm8_A 252 TIANQTNCPL-YITKVM----SKSSAEVIAQARKKGTVV 285 (501)
T ss_dssp HHHHHHTCCE-EEEEEC----CHHHHHHHHHHHHTTCCE
T ss_pred HHHHHhCCcE-EEEeCC----cHHHHHHHHHHHhCCCcE
Confidence 5566666653 232222 233368899999999876
No 407
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=37.67 E-value=22 Score=30.40 Aligned_cols=45 Identities=13% Similarity=0.031 Sum_probs=31.7
Q ss_pred chhHHHHHHHhhcccc-cEEEeeCccccccChhHHHHHHHHHHhCCceec
Q 028948 39 SHNVLEDIFESMGQFV-DGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVS 87 (201)
Q Consensus 39 g~~~l~DlLe~ag~yI-D~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~ 87 (201)
......++++..++|+ +++|.|+--..-+..+.+++ +++.|..|.
T Consensus 15 ~~~~al~l~~~l~~~v~~~~KvG~~l~~~~G~~~v~~----Lk~~g~~Vf 60 (259)
T 3tfx_A 15 NEEQLNKILSKLGDPHDVFVKVGMELFYNAGIDVIKK----LTQQGYKIF 60 (259)
T ss_dssp CHHHHHHHHHTTCCGGGCEEEECHHHHHHHCHHHHHH----HHHTTCEEE
T ss_pred CHHHHHHHHHHhCcccceEEEeCHHHHHhcCHHHHHH----HHHCCCcEE
Confidence 6778899999999999 99999975554444444433 344465554
No 408
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=37.46 E-value=1.5e+02 Score=26.88 Aligned_cols=105 Identities=17% Similarity=0.209 Sum_probs=64.0
Q ss_pred HHHHHHHhhcccccEEEe--eCccccccChhHHHHHHHHHHhC--CceecCccHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 028948 42 VLEDIFESMGQFVDGLKF--SGGSHSLMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKf--g~GTs~l~p~~~L~eKI~l~~~~--gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~ 117 (201)
.++.+++ +| +|++=+ +.|. + +...+.|+..+++ ++++..|+. . . .+..+.+.+.|.|+
T Consensus 259 ~a~~~~~-aG--~d~v~i~~~~G~----~-~~~~~~i~~i~~~~~~~pvi~~~v------~---t-~~~a~~l~~aGad~ 320 (514)
T 1jcn_A 259 RLDLLTQ-AG--VDVIVLDSSQGN----S-VYQIAMVHYIKQKYPHLQVIGGNV------V---T-AAQAKNLIDAGVDG 320 (514)
T ss_dssp HHHHHHH-TT--CSEEEECCSCCC----S-HHHHHHHHHHHHHCTTCEEEEEEE------C---S-HHHHHHHHHHTCSE
T ss_pred HHHHHHH-cC--CCEEEeeccCCc----c-hhHHHHHHHHHHhCCCCceEeccc------c---h-HHHHHHHHHcCCCE
Confidence 3344444 44 677776 4432 3 2356777777777 888877532 1 1 23356778899999
Q ss_pred EEecC--Ccc---------cCChhHHHHHHHHHHHC-CCeEccccccccCC---CCcccccc
Q 028948 118 IELNV--GSL---------EIPEETLLRYVRLVKSA-GLKAKPKFAVMFNK---SDIPSDRD 164 (201)
Q Consensus 118 IEISd--Gti---------~i~~~~r~~lI~~~~~~-Gf~v~pE~g~k~~~---~dl~ag~~ 164 (201)
|-++. |.+ ..|...-..+++.+++. +..|...=|+..+. +-+.+|++
T Consensus 321 I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd 382 (514)
T 1jcn_A 321 LRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGAS 382 (514)
T ss_dssp EEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred EEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 99976 332 34455556777766654 67777666776532 34556665
No 409
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=37.38 E-value=93 Score=23.48 Aligned_cols=93 Identities=15% Similarity=0.039 Sum_probs=46.6
Q ss_pred ccChhHHHHHHHHHHhCCceec--CccHHHHHHHhCCchHHHHHHHHHHcCCC-----EEEecCCcc-------cCChhH
Q 028948 66 LMPKPFIEEVVKRAHQHDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQVGFD-----TIELNVGSL-------EIPEET 131 (201)
Q Consensus 66 l~p~~~L~eKI~l~~~~gV~v~--~GtlfE~al~qg~~~~~eyl~~~k~lGFd-----~IEISdGti-------~i~~~~ 131 (201)
++|. +.+.++.++++|+++. +++.-+.+ -..++.+|++ .+++.+|.. ......
T Consensus 93 ~~~g--~~~~l~~l~~~g~~~~ivS~~~~~~~-----------~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 159 (232)
T 3fvv_A 93 LTVQ--AVDVVRGHLAAGDLCALVTATNSFVT-----------APIARAFGVQHLIATDPEYRDGRYTGRIEGTPSFREG 159 (232)
T ss_dssp CCHH--HHHHHHHHHHTTCEEEEEESSCHHHH-----------HHHHHHTTCCEEEECEEEEETTEEEEEEESSCSSTHH
T ss_pred cCHH--HHHHHHHHHHCCCEEEEEeCCCHHHH-----------HHHHHHcCCCEEEEcceEEECCEEeeeecCCCCcchH
Confidence 4444 7777777777777543 34321111 1223567886 344555521 122345
Q ss_pred HHHHHHHH-HHCC---CeEccccccccCCCCcccccccccccEEEe
Q 028948 132 LLRYVRLV-KSAG---LKAKPKFAVMFNKSDIPSDRDRAFGAYVAR 173 (201)
Q Consensus 132 r~~lI~~~-~~~G---f~v~pE~g~k~~~~dl~ag~~~a~g~~Vi~ 173 (201)
+.+.++.+ ++.| +.+..-+-+-+...|+++.. +.|..|++
T Consensus 160 K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~--~ag~~~~~ 203 (232)
T 3fvv_A 160 KVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLE--AVTRPIAA 203 (232)
T ss_dssp HHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHH--HSSEEEEE
T ss_pred HHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHH--hCCCeEEE
Confidence 55555554 4456 44433344555556776543 35544443
No 410
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=37.32 E-value=18 Score=29.18 Aligned_cols=66 Identities=12% Similarity=-0.019 Sum_probs=52.4
Q ss_pred HHHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH---HCCCeEcc
Q 028948 76 VKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK---SAGLKAKP 148 (201)
Q Consensus 76 I~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~---~~Gf~v~p 148 (201)
-+++++.|| .+. .|-..++|+.+- .. .+.++||+++=++|++-+.+++.....++..+ ..|-.+.+
T Consensus 102 ~~~L~~~gi~~lvi~Gv~T~~CV~~T--a~-----dA~~~Gy~V~vv~Da~as~~~~~h~~aL~~m~~~~~~g~~v~t 172 (204)
T 1yzv_A 102 MPLVDLPEVEQVVLWGFETHVCILQT--AA-----ALLDMKKKVVIAVDGCGSQSQGDHCTAIQLMQSWSGDGCYIST 172 (204)
T ss_dssp HHHHSSTTEEEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSSHHHHHHHHHHHHTTGGGTEEEEC
T ss_pred HHHHHhCCCCEEEEEEeccCHHHHHH--HH-----HHHHCCCEEEEECCccCCCCHHHHHHHHHHHHHHhcCCeEEeC
Confidence 455678899 344 477889998885 44 35578999999999999999999999999988 77766643
No 411
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=37.28 E-value=14 Score=29.73 Aligned_cols=91 Identities=11% Similarity=0.138 Sum_probs=54.2
Q ss_pred eeCccccccChhHHHHHHHHHHhCCceecC-c-cHHHHHHHhCCchHHHHHHHHHHcCC---------------------
Q 028948 59 FSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIRNGPSAFKEYVEDCKQVGF--------------------- 115 (201)
Q Consensus 59 fg~GTs~l~p~~~L~eKI~l~~~~gV~v~~-G-tlfE~al~qg~~~~~eyl~~~k~lGF--------------------- 115 (201)
+-.-...|...+.+....++.+++++...- - -+-|.....+.+.+.+.++.++++||
T Consensus 99 iNls~~~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~L~~~G~~ialDdfG~g~s~l~~L~~l~ 178 (250)
T 4f3h_A 99 VRIGPNSFSDPQMIDTIREQLAVYGVPGERLWLQTPESKVFTHLRNAQQFLASVSAMGCKVGLEQFGSGLDSFQLLAHFQ 178 (250)
T ss_dssp EECCGGGSSCHHHHHHHHHHHHHTTCCGGGEEEEEEHHHHHHSHHHHHHHHHHHHTTTCEEEEEEETSSTHHHHHHTTSC
T ss_pred EEeCHHHhCCcHHHHHHHHHHHHcCCCcceEEEEEechhhhcCHHHHHHHHHHHHHCCCEEEEeCCCCCchHHHHHhhCC
Confidence 334455677777788888888888875322 1 25566665555566777777777664
Q ss_pred -CEEEecCCcc-cCCh-----hHHHHHHHHHHHCCCeEccc
Q 028948 116 -DTIELNVGSL-EIPE-----ETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 116 -d~IEISdGti-~i~~-----~~r~~lI~~~~~~Gf~v~pE 149 (201)
|.|-|+-.++ .+.. ..-..+++.+++.|++|..|
T Consensus 179 ~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~~l~~~viae 219 (250)
T 4f3h_A 179 PAFLKLDRSITGDIASARESQEKIREITSRAQPTGILTVAE 219 (250)
T ss_dssp CSEEEECHHHHTTTTTCSHHHHHHHHTHHHHHHHTCEEEEC
T ss_pred CCEEEECHHHHHhHhcChhhHHHHHHHHHHHHHcCCEEEEe
Confidence 5555553333 1211 12345667777777777554
No 412
>1vpy_A Protein (hypothetical protein EF0366); TIM alpha/beta barrel fold, structural genomics, joint cente structural genomics, JCSG; 2.52A {Enterococcus faecalis} SCOP: c.1.32.1 PDB: 1ztv_A
Probab=37.25 E-value=8.5 Score=33.22 Aligned_cols=67 Identities=18% Similarity=0.375 Sum_probs=36.1
Q ss_pred HHHHHHHhCCceecCccHHHHHHHh--CCchHHHHHHHHHHcCCCEEEecCCcccCChh-HHHHHHHHHHHCCCeE
Q 028948 74 EVVKRAHQHDVYVSTGDWAEHLIRN--GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE-TLLRYVRLVKSAGLKA 146 (201)
Q Consensus 74 eKI~l~~~~gV~v~~GtlfE~al~q--g~~~~~eyl~~~k~lGFd~IEISdGti~i~~~-~r~~lI~~~~~~Gf~v 146 (201)
+||.--|.|=|+|=++||-..-+.. ..+.+..|-+. |++|||+.-+-.+|.. +-.++.+++ -.||+.
T Consensus 4 ~~~~~~~~~~i~iG~sgWs~~~w~~~~~~~~L~~Ya~~-----F~tVEiNsTFY~~p~~~t~~~W~~~t-P~~F~F 73 (289)
T 1vpy_A 4 DKIHHHHHHMIRLGLTSFSEHDYLTGKKRSTLYEYASH-----LPLVEMDTAYYGIPPKERVAEWVKAV-PENFRF 73 (289)
T ss_dssp -----CCCCEEEEEESTTC----------CCHHHHHHH-----CSEEEECHHHHSCCCHHHHHHHHHTS-CTTCEE
T ss_pred ccccccccceEEEecCCCCChhhcCCChhhHHHHHHhh-----CCEEEECccccCCCCHHHHHHHHHhC-CCCcEE
Confidence 4555555555666554555544421 11356766653 9999999999999954 445555544 346775
No 413
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=36.97 E-value=1e+02 Score=27.11 Aligned_cols=114 Identities=10% Similarity=0.089 Sum_probs=61.7
Q ss_pred chhHHHHHHHhhccc--ccEEEeeCccccccChhHHHHHHHHHHhCCceecC----ccHHHHHHHhCCchHHHHHHHHHH
Q 028948 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST----GDWAEHLIRNGPSAFKEYVEDCKQ 112 (201)
Q Consensus 39 g~~~l~DlLe~ag~y--ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~----GtlfE~al~qg~~~~~eyl~~~k~ 112 (201)
....++.+|+.|-+- ==+|.++-|+...++...+.-..+++++++|+|.. |.=+|.+ .+ .++.|++.-.+
T Consensus 36 n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~g~~~~~~~~~~A~~~~VPVaLHlDHg~~~e~i-~~---ai~~~~~~~~~ 111 (306)
T 3pm6_A 36 NLEGILAIIRAAEHKRSPAMILLFPWAIQYADSLLVRTAASACRAASVPITLHLDHAQDPEII-KR---AADLSRSETHE 111 (306)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECHHHHHHHTTHHHHHHHHHHHHCSSCEEEEEEEECCHHHH-HH---HHHTC------
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhHHhhccHHHHHHHHHHHHHCCCCEEEEcCCCCCHHHH-HH---HHHhhhhccCC
Confidence 445555666554321 11455555554445545555666677777777765 3222221 11 22222222233
Q ss_pred cCCCEEEecCCcccCChh--HHHHHHHHHHHCCCeEccccccccCC
Q 028948 113 VGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNK 156 (201)
Q Consensus 113 lGFd~IEISdGti~i~~~--~r~~lI~~~~~~Gf~v~pE~g~k~~~ 156 (201)
-||+.|=|.--..++.+- .=.+++++++..|.-|-.|+|.=-+.
T Consensus 112 ~GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~ 157 (306)
T 3pm6_A 112 PGFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGG 157 (306)
T ss_dssp CCCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCC
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccc
Confidence 399999985544443322 22378889999999999999965333
No 414
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=36.46 E-value=50 Score=27.92 Aligned_cols=40 Identities=13% Similarity=0.098 Sum_probs=19.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHH
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKS 141 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGt---i~i~~~~r~~lI~~~~~ 141 (201)
.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+
T Consensus 23 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~ 65 (291)
T 3tak_A 23 SLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIR 65 (291)
T ss_dssp HHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHH
Confidence 34455555555555555332222 14555666555555544
No 415
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=36.45 E-value=28 Score=29.20 Aligned_cols=80 Identities=11% Similarity=0.061 Sum_probs=58.7
Q ss_pred EEEeeCccccccChhHHHHHHHHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH
Q 028948 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL 133 (201)
Q Consensus 56 ~lKfg~GTs~l~p~~~L~eKI~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~ 133 (201)
+-|-.+ |+++..+ |. ++++++|| .+. .|-..++|+.+- ..+ +.++||+++=++|.+-+.+.+...
T Consensus 123 i~K~~~--saF~~t~-L~---~~L~~~gi~~lvi~Gv~T~~CV~~T--a~d-----A~~~Gy~V~vv~Da~as~~~~~h~ 189 (287)
T 2fq1_A 123 LVKWRY--SAFHRSP-LE---QMLKESGRNQLIITGVYAHIGCMTT--ATD-----AFMRDIKPFMVADALADFSRDEHL 189 (287)
T ss_dssp EECCSS--STTTTSS-HH---HHHHHTTCCEEEEEEECTTTHHHHH--HHH-----HHHTTCEEEEEEEEEECSSHHHHH
T ss_pred EeCCcc--CCcCCCc-HH---HHHHHCCCCEEEEEEeCcchHHHHH--HHH-----HHHCCCEEEEechhccCCCHHHHH
Confidence 456443 3444433 44 45678899 344 477888888875 444 568999999999999999999999
Q ss_pred HHHHHHHHCCCeEcc
Q 028948 134 RYVRLVKSAGLKAKP 148 (201)
Q Consensus 134 ~lI~~~~~~Gf~v~p 148 (201)
..++..+..|-.|.+
T Consensus 190 ~al~~m~~~~~~v~~ 204 (287)
T 2fq1_A 190 MSLKYVAGRSGRVVM 204 (287)
T ss_dssp HHHHHHHHHTCEEEC
T ss_pred HHHHHHHHhCcEEee
Confidence 999999988877743
No 416
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=36.37 E-value=45 Score=32.89 Aligned_cols=46 Identities=24% Similarity=0.387 Sum_probs=36.6
Q ss_pred chHHHHHHHHHHcCCCEEEe---cCCcc---------------cCChhHHHHHHHHHHHCCCeE
Q 028948 101 SAFKEYVEDCKQVGFDTIEL---NVGSL---------------EIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEI---SdGti---------------~i~~~~r~~lI~~~~~~Gf~v 146 (201)
+..++|++.|.+.||+.|=| +.|=- ..|+=+..+|++.|++.|.++
T Consensus 371 e~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~i 434 (738)
T 2d73_A 371 ANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKM 434 (738)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEE
Confidence 46899999999999999999 55522 234445779999999999887
No 417
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=36.34 E-value=15 Score=30.50 Aligned_cols=64 Identities=8% Similarity=0.029 Sum_probs=44.0
Q ss_pred ChhHHHHHHHHHHhCCceecC------ccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHH
Q 028948 68 PKPFIEEVVKRAHQHDVYVST------GDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVK 140 (201)
Q Consensus 68 p~~~L~eKI~l~~~~gV~v~~------GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~ 140 (201)
+.+.+++.++.+|++|+++-- +|.- . +.+.+.++.+.++|.|.+-|--=. -+.+|=+++.+...
T Consensus 110 ~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~-----~--~el~~~~~~~~~~gaDivKia~~a--~~~~D~l~ll~~~~ 179 (238)
T 1sfl_A 110 DIEKHQRIITHLQQYNKEVIISHHNFESTPP-----L--DELQFIFFKMQKFNPEYVKLAVMP--HNKNDVLNLLQAMS 179 (238)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEESSCCCC-----H--HHHHHHHHHHHTTCCSEEEEEECC--SSHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhcCCEEEEEecCCCCCcC-----H--HHHHHHHHHHHHcCCCEEEEEecC--CCHHHHHHHHHHHH
Confidence 778899999999999986432 3321 1 256777889999999999986433 33555556665433
No 418
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=36.15 E-value=51 Score=27.31 Aligned_cols=17 Identities=12% Similarity=0.282 Sum_probs=8.8
Q ss_pred hHHHHHHHHHHcCCCEE
Q 028948 102 AFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~I 118 (201)
.+++.+++|++.|+-+|
T Consensus 81 ~ld~~v~~a~~~Gl~vi 97 (306)
T 2cks_A 81 RMHQLIDMATARGLYVI 97 (306)
T ss_dssp HHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
Confidence 34555555555555444
No 419
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A
Probab=36.00 E-value=28 Score=31.10 Aligned_cols=50 Identities=12% Similarity=0.029 Sum_probs=32.8
Q ss_pred hHHHHHHHHH-HcCCCEEEecCCcc-----------------cCChhHHHHHHHHHHHCCCeEccccc
Q 028948 102 AFKEYVEDCK-QVGFDTIELNVGSL-----------------EIPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 102 ~~~eyl~~~k-~lGFd~IEISdGti-----------------~i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
.+++-++.++ ++||++|-++.-.- ......--++++.+++.|+++...++
T Consensus 34 ~~~e~l~~~~~~~G~~~vR~~~~w~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~~~~~~Gi~p~v~l~ 101 (500)
T 1uhv_A 34 EYIETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFYNFTYIDRIFDSFLEIGIRPFVEIG 101 (500)
T ss_dssp HHHHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEECCHHHHHHHHHHHHHTCEECEEEC
T ss_pred HHHHHHHHHHHhcCceEEEEecCcCCCceeeecccccCCCceEEehhHHHHHHHHHHHCCCEEEEEEc
Confidence 4566666665 88888887763221 11233445788888899999877665
No 420
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=35.93 E-value=50 Score=27.70 Aligned_cols=74 Identities=11% Similarity=0.211 Sum_probs=46.8
Q ss_pred HHHHHHHHHhCCceecCc--cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHH--HHHHHHHHHC--CCe
Q 028948 72 IEEVVKRAHQHDVYVSTG--DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETL--LRYVRLVKSA--GLK 145 (201)
Q Consensus 72 L~eKI~l~~~~gV~v~~G--tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r--~~lI~~~~~~--Gf~ 145 (201)
-.+-++.++++|+++.|| |.-|+.- +.++|+|+|-+ .|.+.. ..+|+.++.- .+.
T Consensus 116 ~~~vi~~~~~~gi~~ipGv~TptEi~~-------------A~~~Gad~vK~------FPa~~~gG~~~lkal~~p~p~ip 176 (232)
T 4e38_A 116 NPNTVRACQEIGIDIVPGVNNPSTVEA-------------ALEMGLTTLKF------FPAEASGGISMVKSLVGPYGDIR 176 (232)
T ss_dssp CHHHHHHHHHHTCEEECEECSHHHHHH-------------HHHTTCCEEEE------CSTTTTTHHHHHHHHHTTCTTCE
T ss_pred CHHHHHHHHHcCCCEEcCCCCHHHHHH-------------HHHcCCCEEEE------CcCccccCHHHHHHHHHHhcCCC
Confidence 345667788888888887 5555443 35789999987 232221 4777777764 567
Q ss_pred EccccccccCC--CCcccccc
Q 028948 146 AKPKFAVMFNK--SDIPSDRD 164 (201)
Q Consensus 146 v~pE~g~k~~~--~dl~ag~~ 164 (201)
+.|.=|+...+ .=+++|+.
T Consensus 177 ~~ptGGI~~~n~~~~l~aGa~ 197 (232)
T 4e38_A 177 LMPTGGITPSNIDNYLAIPQV 197 (232)
T ss_dssp EEEBSSCCTTTHHHHHTSTTB
T ss_pred eeeEcCCCHHHHHHHHHCCCe
Confidence 77877776433 23555555
No 421
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=35.92 E-value=25 Score=29.51 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHcCCC---EEEecCCccc--------CChhHHHHHHHHHHHC
Q 028948 102 AFKEYVEDCKQVGFD---TIELNVGSLE--------IPEETLLRYVRLVKSA 142 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd---~IEISdGti~--------i~~~~r~~lI~~~~~~ 142 (201)
.+.+..+.+.+.||| .|||+-++=. -+.+...++|+.+++.
T Consensus 107 ~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~ 158 (314)
T 2e6f_A 107 ENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLA 158 (314)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHh
Confidence 455556667777999 9999765321 1455667888888775
No 422
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=35.84 E-value=1.5e+02 Score=26.25 Aligned_cols=81 Identities=11% Similarity=0.058 Sum_probs=51.9
Q ss_pred cChhHHHHHHHHHHhCCceecC--c-c-HHHH----HHHhC-----------C-----chHHHHHHHHHHcCCCEEEecC
Q 028948 67 MPKPFIEEVVKRAHQHDVYVST--G-D-WAEH----LIRNG-----------P-----SAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV~v~~--G-t-lfE~----al~qg-----------~-----~~~~eyl~~~k~lGFd~IEISd 122 (201)
.+.+.+++-.+.++++|+.+.. - . +.+. +..+| | ..+.+.++.+++.|... -|
T Consensus 184 ~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~l-hi-- 260 (473)
T 3e74_A 184 VNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRL-HV-- 260 (473)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCE-EE--
T ss_pred CCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCcE-EE--
Confidence 4566788888999999887664 2 2 2221 11111 1 13567778888888543 22
Q ss_pred CcccCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 123 GSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
.-++..+-.++|+.+++.|+.|..|+-.
T Consensus 261 --~Hvst~~~l~li~~ak~~G~~vt~e~~p 288 (473)
T 3e74_A 261 --CHVSSPEGVEEVTRARQEGQDITCESCP 288 (473)
T ss_dssp --CSCCSHHHHHHHHHHHHTTCCEEEEECT
T ss_pred --EeCCCHHHHHHHHHHHHcCCCeEEEEch
Confidence 2345677789999999999998666543
No 423
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A*
Probab=35.82 E-value=84 Score=26.99 Aligned_cols=51 Identities=16% Similarity=0.231 Sum_probs=32.3
Q ss_pred HHHHHHHHHHhC--CceecC--ccH------HHHHHHhCC----chHHHHHHHHHHcCCCEEEecC
Q 028948 71 FIEEVVKRAHQH--DVYVST--GDW------AEHLIRNGP----SAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 71 ~L~eKI~l~~~~--gV~v~~--Gtl------fE~al~qg~----~~~~eyl~~~k~lGFd~IEISd 122 (201)
.+++.++.+|+. ++++.. ||| |..++. ++ .-++.-++.+++.|||.|.|.=
T Consensus 51 ~~~~~~~~lk~~~~~lkvllsiGG~~~~~~~f~~~~~-~~~~r~~fi~siv~~~~~~~fDGiDiDw 115 (353)
T 3alf_A 51 SFRQFTSTVQRKNPSVKTFLSIAGGRANSTAYGIMAR-QPNSRKSFIDSSIRLARQLGFHGLDLDW 115 (353)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECTTSCHHHHHHHHH-SHHHHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHhhCCCCeEEEEECCCCCCchhHHHHhc-CHHHHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 355666666654 476655 665 333332 11 1466677888999999999973
No 424
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity, functional versatility, immune system; 1.31A {Mus musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A
Probab=35.75 E-value=68 Score=27.86 Aligned_cols=20 Identities=20% Similarity=0.368 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHcCCCEEEec
Q 028948 102 AFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEIS 121 (201)
-++..++.+++.|||.|.|.
T Consensus 98 fi~si~~~~~~~~fDGiDiD 117 (377)
T 1vf8_A 98 FIQSVIRFLRQYNFDGLNLD 117 (377)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEe
Confidence 46777888999999999997
No 425
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=35.50 E-value=62 Score=27.39 Aligned_cols=41 Identities=15% Similarity=0.131 Sum_probs=22.1
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHC
Q 028948 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdG---ti~i~~~~r~~lI~~~~~~ 142 (201)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+.
T Consensus 25 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 25 AMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHH
Confidence 3455555555556666555432 2346666666666655543
No 426
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=35.44 E-value=1.1e+02 Score=23.32 Aligned_cols=99 Identities=13% Similarity=0.205 Sum_probs=66.1
Q ss_pred hhHHHHHHHhhc-ccccEEEeeCccccccChhHHHHHHHHHHhCCceecCc-cHHHHHHHhCCchHHHHHHHHHHcCCCE
Q 028948 40 HNVLEDIFESMG-QFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDT 117 (201)
Q Consensus 40 ~~~l~DlLe~ag-~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~ 117 (201)
..-...+ ..++ ...|.+-.++ | ++++.+....++++..+|.+.+- ...=--+++ .+.+++..|+ +
T Consensus 13 k~D~~~L-~~~~~~~~~iI~t~G-s---i~~~~l~~I~~~~~~r~VIi~TD~D~~GekIRk---~i~~~lp~~~-----h 79 (119)
T 2fcj_A 13 RSDKQKV-AAVLNEPVVIVCTNG-T---ISDARLEELADELEGYDVYLLADADEAGEKLRR---QFRRMFPEAE-----H 79 (119)
T ss_dssp HHHHHHH-HHHBSSCCEEEECCS-C---CCHHHHHHHHHHTTTSEEEEECCSSHHHHHHHH---HHHHHCTTSE-----E
T ss_pred hHHHHHH-HHhcCCCCCEEEeCC-c---cCHHHHHHHHHHhcCCCEEEEECCCccHHHHHH---HHHHHCCCCc-----E
Confidence 3344433 4455 5789999875 4 68888999999999999999984 554444454 6777776664 4
Q ss_pred EEecCCcccCChhHHHHHHHHHHHCCCeEccccc
Q 028948 118 IELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 118 IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
.=|+..-..+-+-....+++...+.++.+..++-
T Consensus 80 afi~r~~~gVE~a~~~~I~~aL~~~~~~~~~~~~ 113 (119)
T 2fcj_A 80 LYIDRAYREVAAAPIWHLAQVLLRARFDVRIESL 113 (119)
T ss_dssp ECCCTTTCSTTTSCHHHHHHHHHHTTCCBCGGGT
T ss_pred EeccCCccCcccCCHHHHHHHHHhcccchhhhhh
Confidence 4455555566666666666777777777765543
No 427
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=35.38 E-value=1.6e+02 Score=23.58 Aligned_cols=85 Identities=12% Similarity=0.093 Sum_probs=55.1
Q ss_pred EEeeCcc----ccc---cChhHHHHHHHHHHhCCce---ecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCC---
Q 028948 57 LKFSGGS----HSL---MPKPFIEEVVKRAHQHDVY---VSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVG--- 123 (201)
Q Consensus 57 lKfg~GT----s~l---~p~~~L~eKI~l~~~~gV~---v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdG--- 123 (201)
.|+|.-| .++ +...-+.+.++.+++.|.. +...... +..++++.+.+++.|+...-+..+
T Consensus 21 mklg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~-------~~~~~~~~~~l~~~gl~~~~~~~~~p~ 93 (290)
T 2zvr_A 21 MKLSLVISTSDAAFDALAFKGDLRKGMELAKRVGYQAVEIAVRDPS-------IVDWNEVKILSEELNLPICAIGTGQAY 93 (290)
T ss_dssp CEEEEEECCCC-------CHHHHHHHHHHHHHHTCSEEEEECSCGG-------GSCHHHHHHHHHHHTCCEEEEECTHHH
T ss_pred ceeEEecccchhhccccccccCHHHHHHHHHHhCCCEEEEcCCCcc-------hhhHHHHHHHHHHcCCeEEEEeccCcc
Confidence 4788777 322 2244589999999999872 3332221 137889999999999998877662
Q ss_pred ---cccC---Ch-------hHHHHHHHHHHHCCCeEcc
Q 028948 124 ---SLEI---PE-------ETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 124 ---ti~i---~~-------~~r~~lI~~~~~~Gf~v~p 148 (201)
...+ ++ +...+.|+.|++.|-+...
T Consensus 94 ~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~ 131 (290)
T 2zvr_A 94 LADGLSLTHPNDEIRKKAIERVVKHTEVAGMFGALVII 131 (290)
T ss_dssp HTTCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 1222 22 3456788888888887654
No 428
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=35.38 E-value=82 Score=26.30 Aligned_cols=102 Identities=7% Similarity=-0.056 Sum_probs=62.4
Q ss_pred EEEeeCcccc------c-cChhHHHHHHHHHHhC-CceecC---ccHHHHHHHhCCchHHHHHHHHHHcC-CCEEEecCC
Q 028948 56 GLKFSGGSHS------L-MPKPFIEEVVKRAHQH-DVYVST---GDWAEHLIRNGPSAFKEYVEDCKQVG-FDTIELNVG 123 (201)
Q Consensus 56 ~lKfg~GTs~------l-~p~~~L~eKI~l~~~~-gV~v~~---GtlfE~al~qg~~~~~eyl~~~k~lG-Fd~IEISdG 123 (201)
++=+.+++-. + .+.+.+.+.++-.++. ++++.. .+| ....+.++.+.+.+.| .|.|-+++.
T Consensus 125 ~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~~-------~~~~~~~~a~~~~~aG~~d~i~v~~~ 197 (314)
T 2e6f_A 125 LLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPYF-------DIAHFDTAAAVLNEFPLVKFVTCVNS 197 (314)
T ss_dssp EEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCCC-------CHHHHHHHHHHHHTCTTEEEEEECCC
T ss_pred eEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCCC-------CHHHHHHHHHHHHhcCCceEEEEeCC
Confidence 6666665322 2 2445677777777765 655442 122 1125777888999999 999999997
Q ss_pred c-----ccCC--------------------hhHHHHHHHHHHHC--CCeEccccccccCC---CCcccccc
Q 028948 124 S-----LEIP--------------------EETLLRYVRLVKSA--GLKAKPKFAVMFNK---SDIPSDRD 164 (201)
Q Consensus 124 t-----i~i~--------------------~~~r~~lI~~~~~~--Gf~v~pE~g~k~~~---~dl~ag~~ 164 (201)
+ ++.. ...-.++|+++++. .+.|..-=|+.... +-+.+|++
T Consensus 198 ~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~~~da~~~l~~GAd 268 (314)
T 2e6f_A 198 VGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYSGEDAFLHILAGAS 268 (314)
T ss_dssp EEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHHHTCS
T ss_pred CCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 7 3311 01225778877765 56666666666443 23556777
No 429
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=35.30 E-value=19 Score=28.53 Aligned_cols=47 Identities=15% Similarity=0.103 Sum_probs=32.3
Q ss_pred ChhHHHHHHHHHHhCCceec---CccH------------------HHHHHHhCCchHHHHHHHHHHcCCCEE
Q 028948 68 PKPFIEEVVKRAHQHDVYVS---TGDW------------------AEHLIRNGPSAFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 68 p~~~L~eKI~l~~~~gV~v~---~Gtl------------------fE~al~qg~~~~~eyl~~~k~lGFd~I 118 (201)
+++.+++-+++++++|+.+. .+.. -|. ..+ .+++++++|++.|+-+|
T Consensus 40 ~~~~~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~d~~~~~a~~~Gi~vi 107 (351)
T 3vup_A 40 NKNRIEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGT-MLD---DMKDLLDTAKKYNILVF 107 (351)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSC-HHH---HHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHH-HHH---HHHHHHHHHHHCCCeEE
Confidence 45568889999999998322 1111 011 122 57999999999999876
No 430
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=35.17 E-value=90 Score=26.79 Aligned_cols=70 Identities=14% Similarity=0.265 Sum_probs=35.1
Q ss_pred HHHHHHHHHHhCCc---eecCccHHHHHHHhCCchHHHHHHHHHHcCCCEE-Eec--CC--cccCChhHHHHHHHHHHHC
Q 028948 71 FIEEVVKRAHQHDV---YVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI-ELN--VG--SLEIPEETLLRYVRLVKSA 142 (201)
Q Consensus 71 ~L~eKI~l~~~~gV---~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~I-EIS--dG--ti~i~~~~r~~lI~~~~~~ 142 (201)
.+++-++.|++.|. .++-|+. + +.. +...+|++.+++.||.++ |+- ++ .-.++.++|.+.+++.-++
T Consensus 86 ~~~~yl~~~k~lGf~~iEiS~G~i-~--l~~--~~~~~~I~~~~~~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~~~LeA 160 (251)
T 1qwg_A 86 KFDEFLNECEKLGFEAVEISDGSS-D--ISL--EERNNAIKRAKDNGFMVLTEVGKKMPDKDKQLTIDDRIKLINFDLDA 160 (251)
T ss_dssp CHHHHHHHHHHHTCCEEEECCSSS-C--CCH--HHHHHHHHHHHHTTCEEEEEECCSSHHHHTTCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcCCCEEEECCCcc-c--CCH--HHHHHHHHHHHHCCCEEeeeccccCCcccCCCCHHHHHHHHHHHHHC
Confidence 45555666666554 3444431 1 011 134455566666666553 221 11 2345667777777776666
Q ss_pred CCe
Q 028948 143 GLK 145 (201)
Q Consensus 143 Gf~ 145 (201)
|-.
T Consensus 161 GA~ 163 (251)
T 1qwg_A 161 GAD 163 (251)
T ss_dssp TCS
T ss_pred CCc
Confidence 644
No 431
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure, crystallography, asthma,inhibitor, chitin degradation, methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens} PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A* 2ybu_A*
Probab=35.02 E-value=1e+02 Score=27.11 Aligned_cols=48 Identities=13% Similarity=0.342 Sum_probs=29.6
Q ss_pred HHHHHHHHhC--CceecC--ccHH------HHHHHhCCc----hHHHHHHHHHHcCCCEEEec
Q 028948 73 EEVVKRAHQH--DVYVST--GDWA------EHLIRNGPS----AFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 73 ~eKI~l~~~~--gV~v~~--Gtlf------E~al~qg~~----~~~eyl~~~k~lGFd~IEIS 121 (201)
.+.+..+++. +++|.. |||- ..++. .+. -++.-++.+++.|||.|.|.
T Consensus 56 ~~~~~~lK~~~p~lKvllSiGGw~~~s~~f~~~~~-~~~~R~~fi~siv~~l~~~gfDGiDiD 117 (395)
T 3fy1_A 56 YQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVS-TPENRQTFITSVIKFLRQYEFDGLDFD 117 (395)
T ss_dssp HHHHHHGGGSCTTCEEEEEEECGGGCSHHHHHHHT-SHHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEcCCCCCCchhhHHhC-CHHHHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3344444544 776665 7763 33331 111 36667788899999999995
No 432
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=34.99 E-value=21 Score=28.45 Aligned_cols=79 Identities=6% Similarity=0.005 Sum_probs=57.9
Q ss_pred EEEeeCccccccChhHHHHHHHHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH
Q 028948 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL 133 (201)
Q Consensus 56 ~lKfg~GTs~l~p~~~L~eKI~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~ 133 (201)
+-|-.+. +++..+ |.+ +++++|| .+. .|-..++|+.+- ..+ +.++||+++=++|.+-+.+.+...
T Consensus 104 i~K~~~s--af~~t~-L~~---~L~~~gi~~lvi~G~~t~~CV~~T--a~~-----a~~~G~~v~v~~Da~~~~~~~~~~ 170 (199)
T 3txy_A 104 VTKHQWG--AFTGTD-LDV---QLRRRGITDIVLTGIATNIGVEST--ARE-----AYENNYNVVVVSDAVSTWSTDAQT 170 (199)
T ss_dssp EEESSSS--SSTTSS-HHH---HHHHTTCCEEEEEEECTTTHHHHH--HHH-----HHHTTCEEEEEEEEEEBSCHHHHH
T ss_pred EECCCcC--ccccCc-HHH---HHHhCCCCEEEEEeeccCHHHHHH--HHH-----HHHCCCEEEEecHhhcCCCHHHHH
Confidence 5686554 344432 444 4567888 344 477889998885 443 568999999999999999999999
Q ss_pred HHHHHHHHCCCeEc
Q 028948 134 RYVRLVKSAGLKAK 147 (201)
Q Consensus 134 ~lI~~~~~~Gf~v~ 147 (201)
..++.....|-.|.
T Consensus 171 ~al~~~~~~~~~v~ 184 (199)
T 3txy_A 171 FALTQIFPKLGQVA 184 (199)
T ss_dssp HHHHHTHHHHSEEE
T ss_pred HHHHHHHhhceEEe
Confidence 99988887766653
No 433
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=34.87 E-value=15 Score=32.24 Aligned_cols=72 Identities=25% Similarity=0.384 Sum_probs=40.8
Q ss_pred ChhHHHHHHHHHHhC---C----ceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCccc-----CChhHHHHH
Q 028948 68 PKPFIEEVVKRAHQH---D----VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLE-----IPEETLLRY 135 (201)
Q Consensus 68 p~~~L~eKI~l~~~~---g----V~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~-----i~~~~r~~l 135 (201)
....+.|.|+-.++. + |++++.+|.+--+. .+.+.++.+.+.+. .|+|++|.|... .++....++
T Consensus 192 R~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g~~--~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~ 268 (343)
T 3kru_A 192 RARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGGIN--IDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKY 268 (343)
T ss_dssp HTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTSCC--HHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHH
T ss_pred HHHHHHHHHHHHHhcCCccCCeEEEeechhhhccCcc--HHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehH
Confidence 345677888887765 3 45666555431000 11344555666677 999999877542 233334456
Q ss_pred HHHHHHC
Q 028948 136 VRLVKSA 142 (201)
Q Consensus 136 I~~~~~~ 142 (201)
++.+++.
T Consensus 269 ~~~ir~~ 275 (343)
T 3kru_A 269 AETIKKR 275 (343)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666554
No 434
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=34.86 E-value=63 Score=27.62 Aligned_cols=68 Identities=12% Similarity=0.114 Sum_probs=50.0
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccC-CCCcccccccccccEEEecccCcCee
Q 028948 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFN-KSDIPSDRDRAFGAYVARAPRSTDKL 181 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~-~~dl~ag~~~a~g~~Vi~E~Res~~v 181 (201)
+.+++..|-|+|=+..-. ++.++..++++.+++.|+.+..|+.-... ...+.+|++ +|-+..|.-.+.
T Consensus 135 i~ea~~~GAD~VlLi~a~--L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~-----iIGinnr~l~t~ 203 (272)
T 3tsm_A 135 VYEARSWGADCILIIMAS--VDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSR-----LLGVNNRNLRSF 203 (272)
T ss_dssp HHHHHHTTCSEEEEETTT--SCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCS-----EEEEECBCTTTC
T ss_pred HHHHHHcCCCEEEEcccc--cCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCC-----EEEECCCCCccC
Confidence 667899999999987664 57888889999999999999888742211 123456666 887777765443
No 435
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=34.76 E-value=32 Score=32.43 Aligned_cols=89 Identities=15% Similarity=0.137 Sum_probs=58.9
Q ss_pred hcccccE--EEeeCccccccChhHHHHHHHHHHhCCceecC-c-cHHHHHHH----hCCchHHHHHHHHHHcCCCEEEec
Q 028948 50 MGQFVDG--LKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIR----NGPSAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 50 ag~yID~--lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~-G-tlfE~al~----qg~~~~~eyl~~~k~lGFd~IEIS 121 (201)
.|.-+|- .+||+-|..+-+... ..-+|.+++. | .+-+.... -.++.+++-++.+|++||++|-++
T Consensus 252 ~g~~~D~~~~~~G~R~i~~~~~~~-------f~lNGk~~~l~G~n~h~~~~~~G~~~~~~~~~~dl~~~k~~G~N~vR~~ 324 (667)
T 3cmg_A 252 DGKQIDSVTQPLGLRYYHTDPDKG-------FFLNGKHLPLHGVCRHQDRAEVGNALRPQHHEEDVALMREMGVNAIRLA 324 (667)
T ss_dssp TTEEEEEEEEEECCCCEEEETTTE-------EEETTEECCCEEEECCSCBTTTBTCCCHHHHHHHHHHHHHTTCCEEEET
T ss_pred CCEEEEEEEEeeeeEEEEEeCCCc-------EEECCEEEEEEEEEcCcCccccccCCCHHHHHHHHHHHHHCCCCEEEec
Confidence 3556674 578888887764321 2446667766 6 34221111 122367888999999999999998
Q ss_pred CCcccCChhHHHHHHHHHHHCCCeEccccc
Q 028948 122 VGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 122 dGti~i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
- -|++ .++.+.+.+.||.|..|.-
T Consensus 325 h----~p~~--~~~~~~cD~~Gl~V~~e~~ 348 (667)
T 3cmg_A 325 H----YPQA--TYMYDLMDKHGIVTWAEIP 348 (667)
T ss_dssp T----SCCC--HHHHHHHHHHTCEEEEECC
T ss_pred C----CCCC--HHHHHHHHHCCCEEEEccc
Confidence 3 2333 3688999999999988774
No 436
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC; 2.01A {Arabidopsis thaliana}
Probab=34.40 E-value=93 Score=26.80 Aligned_cols=65 Identities=11% Similarity=0.224 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHhCC--ceecC--ccH------HHHHHHhCCc----hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHH
Q 028948 70 PFIEEVVKRAHQHD--VYVST--GDW------AEHLIRNGPS----AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRY 135 (201)
Q Consensus 70 ~~L~eKI~l~~~~g--V~v~~--Gtl------fE~al~qg~~----~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~l 135 (201)
+.+++.++.+|+.+ +++.. ||| |..++. +++ -++.-++.+++.|||.|.|.=-... +++++..+
T Consensus 51 ~~~~~~~~~lk~~~~~lkvllsiGGw~~~~~~f~~~~~-~~~~r~~fi~siv~~~~~~~fDGiDiDwE~p~-~~~d~~n~ 128 (356)
T 3aqu_A 51 PKFSTFTQTVQRRNPSVKTLLSIGGGIADKTAYASMAS-NPTSRKSFIDSSIRVARSYGFHGLDLDWEYPS-SATEMTNF 128 (356)
T ss_dssp HHHHHHHHHHTTTCTTCEEEEEEECTTSCHHHHHHHHH-SHHHHHHHHHHHHHHHHHHTCSEEEEECSCCC-SHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCceEEEEECCCCCCcchHHHHhc-CHHHHHHHHHHHHHHHHHhCCCeEEEEEeecC-ChhHHHHH
Confidence 44677777788754 76654 765 333332 111 3667778889999999999732211 24555444
Q ss_pred H
Q 028948 136 V 136 (201)
Q Consensus 136 I 136 (201)
+
T Consensus 129 ~ 129 (356)
T 3aqu_A 129 G 129 (356)
T ss_dssp H
T ss_pred H
Confidence 3
No 437
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=34.40 E-value=70 Score=29.42 Aligned_cols=97 Identities=15% Similarity=0.172 Sum_probs=59.5
Q ss_pred HHHHHhhcccccEEEeeCcccc------ccChhHHHHHHHHHHhC--CceecCccHHHHHHHhC----C-chHHHHHHHH
Q 028948 44 EDIFESMGQFVDGLKFSGGSHS------LMPKPFIEEVVKRAHQH--DVYVSTGDWAEHLIRNG----P-SAFKEYVEDC 110 (201)
Q Consensus 44 ~DlLe~ag~yID~lKfg~GTs~------l~p~~~L~eKI~l~~~~--gV~v~~GtlfE~al~qg----~-~~~~eyl~~~ 110 (201)
-+.|..+| +|.+-.|||.+. +.+. =.+.++.+++. ++.+. .|.=..-..| | +.++.+++.+
T Consensus 36 a~~L~~~G--v~~IE~g~~atF~~~~r~~~~d--~~e~l~~i~~~~~~~~l~--~l~R~~N~~G~~~~~ddv~~~~v~~a 109 (464)
T 2nx9_A 36 AQQLDQIG--YWSLECWGGATFDSCIRFLGED--PWQRLRLLKQAMPNTPLQ--MLLRGQNLLGYRHYADDVVDTFVERA 109 (464)
T ss_dssp HHHHHTSC--CSEEEEEETTHHHHHHHTTCCC--HHHHHHHHHHHCSSSCEE--EEECGGGTTSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHcC--CCEEEeCcCccccchhhccCCC--HHHHHHHHHHhCCCCeEE--EEeccccccCcccccchhhHHHHHHH
Confidence 44555665 788999998762 2332 23334444432 33221 1100000001 1 2368899999
Q ss_pred HHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 111 KQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 111 k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
.+.|.+.|-|.+.+-++ +.-...|+.+++.|.+|..
T Consensus 110 ~~~Gvd~i~if~~~sd~--~ni~~~i~~ak~~G~~v~~ 145 (464)
T 2nx9_A 110 VKNGMDVFRVFDAMNDV--RNMQQALQAVKKMGAHAQG 145 (464)
T ss_dssp HHTTCCEEEECCTTCCT--HHHHHHHHHHHHTTCEEEE
T ss_pred HhCCcCEEEEEEecCHH--HHHHHHHHHHHHCCCEEEE
Confidence 99999999999887776 4556899999999999843
No 438
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=34.25 E-value=22 Score=24.00 Aligned_cols=19 Identities=11% Similarity=0.174 Sum_probs=16.6
Q ss_pred ChhHHHHHHHHHHHCCCeE
Q 028948 128 PEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 128 ~~~~r~~lI~~~~~~Gf~v 146 (201)
-..+|.++|.+|++.||..
T Consensus 11 ~d~ewl~LI~~Ak~lGlsl 29 (57)
T 1b0n_B 11 LDQEWVELMVEAKEANISP 29 (57)
T ss_dssp CCHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHHcCCCH
Confidence 3578999999999999975
No 439
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=34.22 E-value=26 Score=28.73 Aligned_cols=63 Identities=13% Similarity=0.035 Sum_probs=50.1
Q ss_pred HHHHhCCc-ee-cCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeE
Q 028948 77 KRAHQHDV-YV-STGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 77 ~l~~~~gV-~v-~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
++++++|| .+ ..|-..++|+.+- . ..+.++||+++=++|.+-+.+.+.....++.+...|=.|
T Consensus 131 ~~L~~~gi~~lii~G~~t~~CV~~T--a-----~da~~~Gy~v~vv~Da~as~~~~~h~~aL~~~~~~~a~v 195 (223)
T 3tg2_A 131 DWLRETGRDQLIITGVYAHIGILST--A-----LDAFMFDIQPFVIGDGVADFSLSDHEFSLRYISGRTGAV 195 (223)
T ss_dssp HHHHHHTCCEEEEEEECTTTHHHHH--H-----HHHHHTTCEEEEEEEEEECSSHHHHHHHHHHHHHHTCEE
T ss_pred HHHHhcCcCceEEeecccChHHHHH--H-----HHHHHCCCEEEEeCcccCCCCHHHHHHHHHHHHHcCCEE
Confidence 45577788 33 3477888888885 3 346789999999999999999999999999988776555
No 440
>3hvb_A Protein FIMX; EAL phosphodiesterase, biofilm, C-DI-GMP, hydrolase; 2.99A {Pseudomonas aeruginosa PAO1}
Probab=34.09 E-value=58 Score=28.31 Aligned_cols=92 Identities=9% Similarity=-0.048 Sum_probs=59.4
Q ss_pred cccccChhHHHHHHHHHHhCCceecC-c-cHHHHHHHhCCchHHHHHHHHHHcCC----------------------CEE
Q 028948 63 SHSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIRNGPSAFKEYVEDCKQVGF----------------------DTI 118 (201)
Q Consensus 63 Ts~l~p~~~L~eKI~l~~~~gV~v~~-G-tlfE~al~qg~~~~~eyl~~~k~lGF----------------------d~I 118 (201)
...|..++.+....++.+++++.+.- - -+-|..+..+.+.+.+.++.++++|| |.|
T Consensus 282 ~~~l~~~~~~~~l~~~l~~~~~~~~~l~lEitE~~~~~~~~~~~~~l~~l~~~G~~ialDDfG~g~ssl~~L~~l~~d~i 361 (437)
T 3hvb_A 282 SASLQDPGLLPWLGVALKAARLPPESLVFQISEADATSYLKQAKQLTQGLATLHCQAAISQFGCSLNPFNALKHLTVQFI 361 (437)
T ss_dssp HHHHHCTTHHHHHHHHHHTTTCCTTCEEEEEEHHHHHHTHHHHHHHHHHHHHTTCEEEEEEETCSSSHHHHHTTSCCSEE
T ss_pred HHHhCCchHHHHHHHHHHHcCCChhhEEEEEEchhhhhCHHHHHHHHHHHHHCCCEEEEcCCCCCccHHHHHhhCCCCEE
Confidence 33456666777777888888865332 1 24566666655566777777776665 666
Q ss_pred EecCCccc-CChh----HHHHHHHHHHHCCCeEccccccccC
Q 028948 119 ELNVGSLE-IPEE----TLLRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 119 EISdGti~-i~~~----~r~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
-|+-.++. +..+ .-..+|..+++.|.+|..| |+...
T Consensus 362 KiD~~~i~~~~~~~~~~~~~~~i~~~~~~~~~viae-gVEt~ 402 (437)
T 3hvb_A 362 KIDGSFVQDLNQVENQEILKGLIAELHEQQKLSIVP-FVESA 402 (437)
T ss_dssp EECGGGSSCCSSHHHHHHHHHHHHHHHHTTCEEEEC-CCCSH
T ss_pred EECHHHHHhHhhCcHHHHHHHHHHHHHHcCCCEEee-eeCCH
Confidence 66655542 3332 2346788889999999888 77654
No 441
>3l3e_A DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, cell cycle checkpoints, acetylation, cytoplasm, cytoskeleton, DNA damage; HET: DNA; 1.26A {Homo sapiens} PDB: 3pd7_A* 3jve_A*
Probab=33.98 E-value=41 Score=23.91 Aligned_cols=74 Identities=14% Similarity=0.130 Sum_probs=51.9
Q ss_pred CCCceeEecCCCCCCcchhHHHHHHHhhcccc-cEEEeeCccccccChhH--HHHHHHHHHhCCceecCccHHHHHHHhC
Q 028948 23 RFGVTEMRSPHYTLSSSHNVLEDIFESMGQFV-DGLKFSGGSHSLMPKPF--IEEVVKRAHQHDVYVSTGDWAEHLIRNG 99 (201)
Q Consensus 23 ~~GlTmV~DkG~s~~~g~~~l~DlLe~ag~yI-D~lKfg~GTs~l~p~~~--L~eKI~l~~~~gV~v~~GtlfE~al~qg 99 (201)
=.|++.++.-.++ . ....++++++..|.-+ +-+- .--|+.+..++. --.|...|++.||++..=.|++.++.++
T Consensus 16 l~g~~i~isg~~~-~-~r~~l~~li~~~Gg~v~~~~s-~~~THlI~~~~~~~~~~K~~~A~~~gi~IV~~~Wl~~c~~~~ 92 (107)
T 3l3e_A 16 LHKVVVCVSKKLS-K-KQSELNGIAASLGADYRRSFD-ETVTHFIYQGRPNDTNREYKSVKERGVHIVSEHWLLDCAQEC 92 (107)
T ss_dssp TTTCEEEECGGGG-G-GHHHHHHHHHHTTCEEESSCC-TTCCEEECCCCTTCCCHHHHHHHHTTCEEECHHHHHHHHHHT
T ss_pred CCCeEEEEeCCCh-H-hHHHHHHHHHHcCCEEecccc-CCceEEEecCCCCCCCHHHHHHHHCCCeEecHHHHHHHHHhC
Confidence 3589999885543 3 6788999999886533 2111 223566663221 1378899999999998889999999987
No 442
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=33.91 E-value=74 Score=26.43 Aligned_cols=17 Identities=29% Similarity=0.284 Sum_probs=11.6
Q ss_pred hHHHHHHHHHHcCCCEE
Q 028948 102 AFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~I 118 (201)
.+++.++.|++.|+-+|
T Consensus 81 ~ld~~v~~a~~~Gi~Vi 97 (303)
T 7a3h_A 81 KVKEAVEAAIDLDIYVI 97 (303)
T ss_dssp HHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
Confidence 56677777777777655
No 443
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=33.81 E-value=52 Score=28.83 Aligned_cols=19 Identities=26% Similarity=0.618 Sum_probs=14.1
Q ss_pred HHHHHHHHHHcCCCEEEec
Q 028948 103 FKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEIS 121 (201)
|-+--+.+++.|||.|||.
T Consensus 145 f~~AA~~a~~aGfDgVEih 163 (343)
T 3kru_A 145 FGEAAKRANLAGYDVVEIH 163 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHhhccccCCceEEEe
Confidence 3344455678899999998
No 444
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=33.60 E-value=51 Score=29.96 Aligned_cols=70 Identities=17% Similarity=0.079 Sum_probs=42.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHC--CCeEcc-cc-ccccCCCCcccccccccccEEEecccC
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSA--GLKAKP-KF-AVMFNKSDIPSDRDRAFGAYVARAPRS 177 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~--Gf~v~p-E~-g~k~~~~dl~ag~~~a~g~~Vi~E~Re 177 (201)
...+.++.+.+.|++.|+|.-..-. .+...++|+.+++. ++.|.. ++ .......-.++|++ +|++ +.+
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~--~~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad-----~I~v-g~~ 326 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGN--SVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVD-----GLRV-GMG 326 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCC--SHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCS-----EEEE-CSS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCc--chhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCC-----EEEE-CCC
Confidence 3567778889999999999433211 13345788888887 777654 12 11112233557777 8877 544
Q ss_pred cC
Q 028948 178 TD 179 (201)
Q Consensus 178 s~ 179 (201)
.|
T Consensus 327 ~G 328 (514)
T 1jcn_A 327 CG 328 (514)
T ss_dssp CS
T ss_pred CC
Confidence 44
No 445
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=33.59 E-value=1.3e+02 Score=25.09 Aligned_cols=100 Identities=13% Similarity=0.206 Sum_probs=58.1
Q ss_pred HHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCCc---eecCccHHHHHH--HhCCc-hHH---HHHHHHHH
Q 028948 42 VLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV---YVSTGDWAEHLI--RNGPS-AFK---EYVEDCKQ 112 (201)
Q Consensus 42 ~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV---~v~~GtlfE~al--~qg~~-~~~---eyl~~~k~ 112 (201)
.+.++++.+.+.-...++..-|... .|.+.++.++++|+ .++.-|+-+..+ ..+.. .++ +-++.+++
T Consensus 82 ~l~~li~~~~~~~~~~~i~i~TNG~----ll~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~ 157 (340)
T 1tv8_A 82 DLDVLIAKLNQIDGIEDIGLTTNGL----LLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATS 157 (340)
T ss_dssp THHHHHHHHTTCTTCCEEEEEECST----THHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHhCCCCCeEEEEeCcc----chHHHHHHHHHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 4678888777652222455444332 35567777777775 445533322111 22223 454 44566788
Q ss_pred cCCCEEEecCCcc-cCChhHHHHHHHHHHHCCCeE
Q 028948 113 VGFDTIELNVGSL-EIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 113 lGFd~IEISdGti-~i~~~~r~~lI~~~~~~Gf~v 146 (201)
.|+ .|.++-=.+ ....++..++++.+++.|+.+
T Consensus 158 ~g~-~v~i~~vv~~g~n~~ei~~~~~~~~~~g~~~ 191 (340)
T 1tv8_A 158 IGL-NVKVNVVIQKGINDDQIIPMLEYFKDKHIEI 191 (340)
T ss_dssp TTC-EEEEEEEECTTTTGGGHHHHHHHHHHTTCCE
T ss_pred CCC-CEEEEEEEeCCCCHHHHHHHHHHHHhcCCeE
Confidence 898 565543222 246778899999999999864
No 446
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=33.23 E-value=44 Score=31.00 Aligned_cols=47 Identities=11% Similarity=0.124 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeE-ccccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA-KPKFA 151 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v-~pE~g 151 (201)
.+.+-+++|-+.|..+|=||+|+- .++-.++.+.+++.|+++ =|-.|
T Consensus 48 ~v~~~v~e~~~~Gv~~viis~Gf~---~~~~~~l~~~A~~~g~rliGPNcG 95 (480)
T 3dmy_A 48 YAAELANQALDRNLNVMMFSDNVT---LEDEIQLKTRAREKGLLVMGPDCG 95 (480)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCCC---HHHHHHHHHHHHHTTCCEECSSCC
T ss_pred HHHHHHHHHHhcCCCEEEECCCCC---HHHHHHHHHHHHHcCCEEEecCcc
Confidence 577888999999999999999984 667779999999999997 34443
No 447
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=32.99 E-value=1.3e+02 Score=25.30 Aligned_cols=57 Identities=11% Similarity=0.172 Sum_probs=41.8
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCCCCcccccc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD 164 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~~dl~ag~~ 164 (201)
++-++.+.+.|.|+|||. ||..+..+.-.++++++++..+.+.-+.+- . .-+..|+|
T Consensus 26 ~~~l~~~~~~GtDaI~vG-gs~gvt~~~~~~~v~~ik~~~~Piil~p~~--~-~~~~~gaD 82 (235)
T 3w01_A 26 DDDLDAICMSQTDAIMIG-GTDDVTEDNVIHLMSKIRRYPLPLVLEISN--I-ESVMPGFD 82 (235)
T ss_dssp HHHHHHHHTSSCSEEEEC-CSSCCCHHHHHHHHHHHTTSCSCEEEECCC--S-TTCCTTCS
T ss_pred HHHHHHHHHcCCCEEEEC-CcCCcCHHHHHHHHHHhcCcCCCEEEecCC--H-HHhhcCCC
Confidence 455666789999999997 488889999999999999976666555552 1 23444555
No 448
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=32.96 E-value=45 Score=27.41 Aligned_cols=62 Identities=10% Similarity=0.024 Sum_probs=42.5
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccccccc-CCCCcccccccccccEEEec
Q 028948 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMF-NKSDIPSDRDRAFGAYVARA 174 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~-~~~dl~ag~~~a~g~~Vi~E 174 (201)
++++.+.|.|.|-+... .-..++...++++.+++.|+.+.+++.-.. ...-.++|++ +|.+.
T Consensus 94 i~~~~~~Gad~V~l~~~-~~~~p~~l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~Gad-----~Ig~~ 156 (232)
T 3igs_A 94 VDALAQAGAAIIAVDGT-ARQRPVAVEALLARIHHHHLLTMADCSSVDDGLACQRLGAD-----IIGTT 156 (232)
T ss_dssp HHHHHHHTCSEEEEECC-SSCCSSCHHHHHHHHHHTTCEEEEECCSHHHHHHHHHTTCS-----EEECT
T ss_pred HHHHHHcCCCEEEECcc-ccCCHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHhCCCC-----EEEEc
Confidence 57789999999977554 334446777999999999999987654221 1233456777 77643
No 449
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=32.91 E-value=1.3e+02 Score=25.14 Aligned_cols=57 Identities=18% Similarity=0.192 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccCCCCcccccc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFNKSDIPSDRD 164 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~~~dl~ag~~ 164 (201)
.+.++.+.+-|.|+|||-- |..+..+.-.++++++++....+.-+-... ..+.+|.|
T Consensus 23 ~~~~~~l~~~GaD~IelG~-S~g~t~~~~~~~v~~ir~~~~Pivl~~y~~---n~i~~gvD 79 (234)
T 2f6u_A 23 DEIIKAVADSGTDAVMISG-TQNVTYEKARTLIEKVSQYGLPIVVEPSDP---SNVVYDVD 79 (234)
T ss_dssp HHHHHHHHTTTCSEEEECC-CTTCCHHHHHHHHHHHTTSCCCEEECCSSC---CCCCCCSS
T ss_pred HHHHHHHHHcCCCEEEECC-CCCCCHHHHHHHHHHhcCCCCCEEEecCCc---chhhcCCC
Confidence 4557788889999999964 566778888899999987443332222221 34577777
No 450
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=32.70 E-value=73 Score=28.46 Aligned_cols=20 Identities=15% Similarity=0.333 Sum_probs=17.2
Q ss_pred hHHHHHHHHHHcCCCEEEec
Q 028948 102 AFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEIS 121 (201)
-++..++.+++.|||.|.|.
T Consensus 98 fi~siv~~l~~~gfDGiDiD 117 (445)
T 1wb0_A 98 FVNSAIRFLRKYSFDGLDLD 117 (445)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCeEEEe
Confidence 46777888999999999996
No 451
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=32.52 E-value=58 Score=24.09 Aligned_cols=66 Identities=14% Similarity=0.034 Sum_probs=45.7
Q ss_pred CCCceeEecCCCCCCcchhHHHHHHHhhccc--------ccEEEeeCccccccChhHHHHHHHHHHhCCceecCccHHHH
Q 028948 23 RFGVTEMRSPHYTLSSSHNVLEDIFESMGQF--------VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEH 94 (201)
Q Consensus 23 ~~GlTmV~DkG~s~~~g~~~l~DlLe~ag~y--------ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~GtlfE~ 94 (201)
-.|.|.|+-=-++-+ ...+++++++..|-- .|+|=.|- +.-..|++-|+++||++..=.||-.
T Consensus 33 l~G~~~v~TG~l~~~-~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~--------~~g~sK~~kA~~lgI~Ii~E~~f~~ 103 (109)
T 2k6g_A 33 LEGLIFVITGVLESI-ERDEAKSLIERYGGKVTGNVSKKTNYLVMGR--------DSGQSKSDKAAALGTKIIDEDGLLN 103 (109)
T ss_dssp TTTCEEEEESBCSSC-CHHHHHHHHHHTTCEEESSCCTTCCEEEECB--------CCCHHHHHHHHHHTCEEECHHHHHH
T ss_pred CCCCEEEEeeeCCCC-CHHHHHHHHHHcCCEeeCcccCCceEEEECC--------CCChHHHHHHHHcCCeEEeHHHHHH
Confidence 468899887555444 788999999988764 45655542 1113688889999999988655544
Q ss_pred HHH
Q 028948 95 LIR 97 (201)
Q Consensus 95 al~ 97 (201)
++.
T Consensus 104 ll~ 106 (109)
T 2k6g_A 104 LIR 106 (109)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 452
>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1
Probab=32.47 E-value=23 Score=35.31 Aligned_cols=68 Identities=21% Similarity=0.222 Sum_probs=48.6
Q ss_pred ChhHHHHHHHHHHhCCceec--CccHHHHHHHhCCchHHHHHHHHHHcCCCEE------------------------Eec
Q 028948 68 PKPFIEEVVKRAHQHDVYVS--TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTI------------------------ELN 121 (201)
Q Consensus 68 p~~~L~eKI~l~~~~gV~v~--~GtlfE~al~qg~~~~~eyl~~~k~lGFd~I------------------------EIS 121 (201)
+++..++-|+.+|++||.+. +|+=-+.|..= ++++|++.- +=.
T Consensus 536 ~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aI-----------A~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~ 604 (920)
T 1mhs_A 536 PRHDTYKTVCEAKTLGLSIKMLTGDAVGIARET-----------SRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAA 604 (920)
T ss_dssp CCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHH-----------HHHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTT
T ss_pred ccccHHHHHHHHhhcCceEEEEcCCCHHHHHHH-----------HHHcCCCccccCccceeecCcccCCHHHHHHHHhhC
Confidence 45678999999999999665 68755555332 477787521 001
Q ss_pred CCcccCChhHHHHHHHHHHHCCCeE
Q 028948 122 VGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 122 dGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
+.+-.+.+++|.++|+..++.|-.|
T Consensus 605 ~V~arv~P~~K~~iV~~Lq~~g~~V 629 (920)
T 1mhs_A 605 DGFAEVFPQHKYNVVEILQQRGYLV 629 (920)
T ss_dssp SCEESCCSTHHHHHHHHHHTTTCCC
T ss_pred eEEEEeCHHHHHHHHHHHHhCCCeE
Confidence 2466789999999999999998544
No 453
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A*
Probab=32.46 E-value=49 Score=29.51 Aligned_cols=50 Identities=12% Similarity=0.097 Sum_probs=32.7
Q ss_pred hHHHHHHHHH-HcCCCEEEec----CC-------------cccCChhHHHHHHHHHHHCCCeEccccc
Q 028948 102 AFKEYVEDCK-QVGFDTIELN----VG-------------SLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 102 ~~~eyl~~~k-~lGFd~IEIS----dG-------------ti~i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
.+++-++.++ ++||++|-++ |+ .........-++++.+++.|+++...++
T Consensus 34 ~~~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~~~~n~~~~D~~~~~~~~~Gi~p~v~l~ 101 (503)
T 1w91_A 34 EYLDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMKPFYNFTYIDRIVDSYLALNIRPFIEFG 101 (503)
T ss_dssp HHHHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEEEEECCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCceeeccHHHHHHHHHHHHCCCEEEEEEc
Confidence 4555666664 7888888877 22 1111234456789999999999877665
No 454
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=32.35 E-value=1.1e+02 Score=26.01 Aligned_cols=16 Identities=31% Similarity=0.434 Sum_probs=10.8
Q ss_pred HHHHHHHHHHHCCCeE
Q 028948 131 TLLRYVRLVKSAGLKA 146 (201)
Q Consensus 131 ~r~~lI~~~~~~Gf~v 146 (201)
+..+.|+++++.|..+
T Consensus 261 ~~~~~i~~~~~~gv~v 276 (430)
T 1ra0_A 261 YTSRLFRLLKMSGINF 276 (430)
T ss_dssp HHHHHHHHHHHHTCEE
T ss_pred hHHHHHHHHHHcCCEE
Confidence 3445777777777765
No 455
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=32.22 E-value=73 Score=27.09 Aligned_cols=17 Identities=41% Similarity=0.530 Sum_probs=11.8
Q ss_pred hHHHHHHHHHHcCCCEE
Q 028948 102 AFKEYVEDCKQVGFDTI 118 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~I 118 (201)
.+++.++.|++.|+-+|
T Consensus 106 ~ld~~v~~a~~~Gi~Vi 122 (327)
T 3pzt_A 106 KVKEAVEAAKELGIYVI 122 (327)
T ss_dssp HHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHCCCEEE
Confidence 56777777777777665
No 456
>2ebu_A Replication factor C subunit 1; A/B/A 3 layers, parallel beta-sheet, DNA replication, clamp loader, RFC1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.95 E-value=1.1e+02 Score=22.87 Aligned_cols=78 Identities=17% Similarity=0.073 Sum_probs=52.7
Q ss_pred CCCCCCCCCCCCCceeEecCCCCCCcchhHHHHHHHhhccc--------ccEEEeeCccccccChhHHHHHHHHHHhCCc
Q 028948 13 EYEDRAEKPRRFGVTEMRSPHYTLSSSHNVLEDIFESMGQF--------VDGLKFSGGSHSLMPKPFIEEVVKRAHQHDV 84 (201)
Q Consensus 13 ~~~~R~~KPR~~GlTmV~DkG~s~~~g~~~l~DlLe~ag~y--------ID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV 84 (201)
++|.-...| -.|+|.|+-=-++-+ ...+++++++..|-- .|+|=.|- +.-..|++-|+++||
T Consensus 14 ~~P~~~~~~-l~G~~~v~TG~l~~~-~R~e~~~~i~~~Ggkv~~sVSkkTd~LV~G~--------~~g~sKl~KA~~lgI 83 (112)
T 2ebu_A 14 EIPKGAENC-LEGLIFVITGVLESI-ERDEAKSLIERYGGKVTGNVSKKTNYLVMGR--------DSGQSKSDKAAALGT 83 (112)
T ss_dssp CCCCCCSSS-STTCEEEECSCCSSS-CHHHHHHHHHHTTCEECSSCCSSCCEEEECS--------SCCSHHHHHHHHHTC
T ss_pred cCCCCCCCC-cCCCEEEEeeeCCCC-CHHHHHHHHHHcCCEEeccccCCeeEEEecC--------CCChHHHHHHHHcCC
Confidence 344333333 468999988666555 788999999987754 45555542 111258888999999
Q ss_pred eecCccHHHHHHHhCC
Q 028948 85 YVSTGDWAEHLIRNGP 100 (201)
Q Consensus 85 ~v~~GtlfE~al~qg~ 100 (201)
++..=.||-.++.+.|
T Consensus 84 ~IisE~~f~~ll~~~~ 99 (112)
T 2ebu_A 84 KIIDEDGLLNLIRTMP 99 (112)
T ss_dssp EEEEHHHHHHHHHHSC
T ss_pred eEEeHHHHHHHHhhCC
Confidence 9998766666666654
No 457
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=31.94 E-value=1.4e+02 Score=22.96 Aligned_cols=85 Identities=15% Similarity=0.069 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHhCCceecCc-cHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCc----ccCChhHHHHHHHHHHHCCC
Q 028948 70 PFIEEVVKRAHQHDVYVSTG-DWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGS----LEIPEETLLRYVRLVKSAGL 144 (201)
Q Consensus 70 ~~L~eKI~l~~~~gV~v~~G-tlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGt----i~i~~~~r~~lI~~~~~~Gf 144 (201)
+.+++-++.++++|+.+ | ++. .++...+-++.+.++|.|+|-+.-+. ...+..+ +.|+.+....+
T Consensus 90 ~~~~~~~~~~~~~g~~~--gv~~~------s~~~p~~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~--~~i~~~~~~~~ 159 (207)
T 3ajx_A 90 STIAGAVKAAQAHNKGV--VVDLI------GIEDKATRAQEVRALGAKFVEMHAGLDEQAKPGFDLN--GLLAAGEKARV 159 (207)
T ss_dssp HHHHHHHHHHHHHTCEE--EEECT------TCSSHHHHHHHHHHTTCSEEEEECCHHHHTSTTCCTH--HHHHHHHHHTS
T ss_pred HHHHHHHHHHHHcCCce--EEEEe------cCCChHHHHHHHHHhCCCEEEEEecccccccCCCchH--HHHHHhhCCCC
Confidence 34556666666666653 3 220 11122333445566789998443222 1122222 44555554234
Q ss_pred eEccccccc--cCCCCcccccc
Q 028948 145 KAKPKFAVM--FNKSDIPSDRD 164 (201)
Q Consensus 145 ~v~pE~g~k--~~~~dl~ag~~ 164 (201)
.+...-|++ ....-+++|++
T Consensus 160 pi~v~GGI~~~~~~~~~~aGad 181 (207)
T 3ajx_A 160 PFSVAGGVKVATIPAVQKAGAE 181 (207)
T ss_dssp CEEEESSCCGGGHHHHHHTTCS
T ss_pred CEEEECCcCHHHHHHHHHcCCC
Confidence 444444665 33344677777
No 458
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=31.92 E-value=47 Score=29.73 Aligned_cols=114 Identities=13% Similarity=0.096 Sum_probs=68.9
Q ss_pred chhHHHHHHHhhccc--ccEEEeeCccccccC-----------hhHHHHHHHHHHhCCceecC----cc------HHHHH
Q 028948 39 SHNVLEDIFESMGQF--VDGLKFSGGSHSLMP-----------KPFIEEVVKRAHQHDVYVST----GD------WAEHL 95 (201)
Q Consensus 39 g~~~l~DlLe~ag~y--ID~lKfg~GTs~l~p-----------~~~L~eKI~l~~~~gV~v~~----Gt------lfE~a 95 (201)
....++.+|+.|-+- ==+|.++-|+...+. .....-...++++++|+|.. |. |++-+
T Consensus 30 n~e~~~Avl~AAee~~sPvIlq~s~g~~~y~~g~~~~~~v~g~~~~a~~v~~~A~~~~VPVaLHlDHg~~~~ld~~~~~~ 109 (349)
T 3elf_A 30 SSETVNAAIKGFADAGSDGIIQFSTGGAEFGSGLGVKDMVTGAVALAEFTHVIAAKYPVNVALHTDHCPKDKLDSYVRPL 109 (349)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHTTSSSCEEEEECCCCGGGGGGTHHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhHHhhcCcchhhhhhhhHHHHHHHHHHHHHHCCCCEEEECCCCCCcccchhhhhh
Confidence 555666666655332 114555544433221 11233445678899999985 42 44444
Q ss_pred HHhCCchHHHHHHHHHHcCCCEEEecCCcccCChh--HHHHHHHHHHHCCCeEccccccccCC
Q 028948 96 IRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEE--TLLRYVRLVKSAGLKAKPKFAVMFNK 156 (201)
Q Consensus 96 l~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~--~r~~lI~~~~~~Gf~v~pE~g~k~~~ 156 (201)
+.. ..++++.+-+.||+.|=|.--.+++.+- .=.+++++++..|.-|-.|+|.==+.
T Consensus 110 l~~----~~~~i~~~i~~GFtSVMiDgS~lp~eENi~~Tk~vv~~ah~~gvsVEaElG~iGG~ 168 (349)
T 3elf_A 110 LAI----SAQRVSKGGNPLFQSHMWDGSAVPIDENLAIAQELLKAAAAAKIILEIEIGVVGGE 168 (349)
T ss_dssp HHH----HHHHHHTTCCCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCBC-
T ss_pred HHH----HHHHHHHHhhcCCCEEEecCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeccccc
Confidence 322 3566777778899999995554444321 22378889999999999999965443
No 459
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=31.43 E-value=3.3e+02 Score=25.45 Aligned_cols=96 Identities=19% Similarity=0.258 Sum_probs=68.5
Q ss_pred HHHhhcccccEEEeeCccccccChhHHHHHHHHHHhC-CceecCcc----HHHHHHHh--CC----------chHHHHHH
Q 028948 46 IFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQH-DVYVSTGD----WAEHLIRN--GP----------SAFKEYVE 108 (201)
Q Consensus 46 lLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~-gV~v~~Gt----lfE~al~q--g~----------~~~~eyl~ 108 (201)
+++.-+++|| +|-|...+-.++.+++.+...++. +++++--| -+|.++.. |. +++++.++
T Consensus 349 ~v~~GAdiID---Igpg~~~v~~~ee~~rvv~~i~~~~~vpisIDT~~~~v~eaal~~~~G~~iINdis~~~~~~~~~~~ 425 (566)
T 1q7z_A 349 QVEKGAEVLD---VNFGIESQIDVRYVEKIVQTLPYVSNVPLSLDIQNVDLTERALRAYPGRSLFNSAKVDEEELEMKIN 425 (566)
T ss_dssp HHHTTCSEEE---EECSSGGGSCHHHHHHHHHHHHHHTCSCEEEECCCHHHHHHHHHHCSSCCEEEEEESCHHHHHHHHH
T ss_pred HHHCCCCEEE---ECCCCCCCCHHHHHHHHHHHHHhhCCceEEEeCCCHHHHHHHHHhcCCCCEEEECCcchhhHHHHHH
Confidence 3344455555 567888888899999999888765 88888753 68888877 43 24578899
Q ss_pred HHHHcCCCEEEecCCcccCCh------hHHHHHHHHHHHCCCe
Q 028948 109 DCKQVGFDTIELNVGSLEIPE------ETLLRYVRLVKSAGLK 145 (201)
Q Consensus 109 ~~k~lGFd~IEISdGti~i~~------~~r~~lI~~~~~~Gf~ 145 (201)
.+++.|...|=....-- +|. +...+.++++.+.|+.
T Consensus 426 ~~~~~g~~vV~m~~~~~-~p~t~~~~~~~l~~~~~~a~~~Gi~ 467 (566)
T 1q7z_A 426 LLKKYGGTLIVLLMGKD-VPKSFEERKEYFEKALKILERHDFS 467 (566)
T ss_dssp HHHHHCCEEEEESCSSS-CCCSHHHHHHHHHHHHHHHHHTTCG
T ss_pred HHHHhCCeEEEEeCCCC-CcCCHHHHHHHHHHHHHHHHHCCCC
Confidence 99999998887653221 332 3345678888999984
No 460
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=31.42 E-value=2.3e+02 Score=23.57 Aligned_cols=91 Identities=16% Similarity=0.165 Sum_probs=54.3
Q ss_pred chhHHHHHHHhh-cccccEEEeeC--c--c------ccccChhHHHHHHHHHHhCCceecC--ccHHHHHHHhCCchHHH
Q 028948 39 SHNVLEDIFESM-GQFVDGLKFSG--G--S------HSLMPKPFIEEVVKRAHQHDVYVST--GDWAEHLIRNGPSAFKE 105 (201)
Q Consensus 39 g~~~l~DlLe~a-g~yID~lKfg~--G--T------s~l~p~~~L~eKI~l~~~~gV~v~~--GtlfE~al~qg~~~~~e 105 (201)
.+..++.+++.+ ..-.|.+|+-. | + ...++.+.+++.+++++++|+++.. .+-- .
T Consensus 164 ~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~---------~--- 231 (408)
T 3be7_A 164 SPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLI---------G--- 231 (408)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHH---------H---
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHH---------H---
Confidence 455666666533 22358889852 1 1 2356778899999999999998865 2210 1
Q ss_pred HHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccc
Q 028948 106 YVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPK 149 (201)
Q Consensus 106 yl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE 149 (201)
++.+.+.|++.|+=.. .++ .+.++++++.|..+.|.
T Consensus 232 -i~~~~~~g~~~i~H~~---~~~----~~~i~~~~~~g~~v~~~ 267 (408)
T 3be7_A 232 -IKAAIKAGVDSVEHAS---FID----DETIDMAIKNNTVLSMD 267 (408)
T ss_dssp -HHHHHHHTCSEEEECT---TCC----HHHHHHHHHTTCEEECC
T ss_pred -HHHHHHcCCCEEEECC---CCC----HHHHHHHHHCCCEEeee
Confidence 2223345776655332 122 34567777788877655
No 461
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=31.42 E-value=75 Score=26.86 Aligned_cols=40 Identities=20% Similarity=0.210 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHH
Q 028948 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKS 141 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdG---ti~i~~~~r~~lI~~~~~ 141 (201)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+
T Consensus 21 ~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~ 63 (293)
T 1w3i_A 21 KLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYD 63 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 3445555555555555554332 234555566555555554
No 462
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=31.30 E-value=53 Score=28.35 Aligned_cols=62 Identities=10% Similarity=0.062 Sum_probs=40.0
Q ss_pred CceeEecCCCCCCcchhHHHHHHHhhcccccEEEe--eC-ccccccChhHHHHHHHHHHhCCceecCccHHHHHH
Q 028948 25 GVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKF--SG-GSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLI 96 (201)
Q Consensus 25 GlTmV~DkG~s~~~g~~~l~DlLe~ag~yID~lKf--g~-GTs~l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al 96 (201)
++-.+.|=.+ . ++..++++++.- -+|++-+ +. |. +. ..++.+++|++||+.+++|+++|..+
T Consensus 242 ~iPI~~dE~~--~-~~~~~~~~i~~~--~~d~v~ik~~~~GG--i~---~~~~i~~~A~~~gi~~~~h~~~~a~~ 306 (371)
T 2ovl_A 242 GHTIAGGENL--H-TLYDFHNAVRAG--SLTLPEPDVSNIGG--YT---TFRKVAALAEANNMLLTSHGVHDLTV 306 (371)
T ss_dssp CSCEEECTTC--C-SHHHHHHHHHHT--CCSEECCCTTTTTS--HH---HHHHHHHHHHHTTCCEEECSCHHHHH
T ss_pred CCCEEeCCCC--C-CHHHHHHHHHcC--CCCEEeeCccccCC--HH---HHHHHHHHHHHcCCeEccccHHHHHH
Confidence 3445555433 3 667778887653 3565533 22 11 22 26788999999999999998888554
No 463
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=31.23 E-value=2.5e+02 Score=24.13 Aligned_cols=101 Identities=18% Similarity=0.199 Sum_probs=68.1
Q ss_pred ccEEEeeCcc-----ccccChhHHHHHH---HHHHh-CCceecCcc----HHHHHHHhCCc---------hHHHHHHHHH
Q 028948 54 VDGLKFSGGS-----HSLMPKPFIEEVV---KRAHQ-HDVYVSTGD----WAEHLIRNGPS---------AFKEYVEDCK 111 (201)
Q Consensus 54 ID~lKfg~GT-----s~l~p~~~L~eKI---~l~~~-~gV~v~~Gt----lfE~al~qg~~---------~~~eyl~~~k 111 (201)
-|+|.+|.-+ ..+.+++.+++.+ +..++ .+++++--| -+|.|+..|.+ ..++.++.++
T Consensus 77 AdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~aGa~iINdvsg~~~d~~m~~~aa 156 (297)
T 1tx2_A 77 AHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAA 156 (297)
T ss_dssp CSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHHHTCCEEEETTTTSSCTHHHHHHH
T ss_pred CCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence 5677778533 4556677777766 54454 499988753 68888877541 2567899999
Q ss_pred HcCCCEEEecCCcccCCh---------hHHHHHHHHHHHCCCe---EccccccccCC
Q 028948 112 QVGFDTIELNVGSLEIPE---------ETLLRYVRLVKSAGLK---AKPKFAVMFNK 156 (201)
Q Consensus 112 ~lGFd~IEISdGti~i~~---------~~r~~lI~~~~~~Gf~---v~pE~g~k~~~ 156 (201)
+.|...|=.... ..|. +...+.++.+.+.|++ ..-.-|+-|++
T Consensus 157 ~~g~~vVlmh~~--G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gfgk 211 (297)
T 1tx2_A 157 HYDVPIILMHNR--DNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAK 211 (297)
T ss_dssp HHTCCEEEECCC--SCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSC
T ss_pred HhCCcEEEEeCC--CCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCcCC
Confidence 999999887652 1222 5566788999999997 44444555543
No 464
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=31.14 E-value=70 Score=27.53 Aligned_cols=39 Identities=21% Similarity=0.187 Sum_probs=17.0
Q ss_pred HHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHH
Q 028948 103 FKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKS 141 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdG---ti~i~~~~r~~lI~~~~~ 141 (201)
+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+
T Consensus 45 l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~ 86 (315)
T 3si9_A 45 FCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVE 86 (315)
T ss_dssp HHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHH
Confidence 444444444445555432221 124455555555544443
No 465
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=30.88 E-value=91 Score=27.31 Aligned_cols=82 Identities=11% Similarity=0.109 Sum_probs=48.9
Q ss_pred eCccccccChhHHHHHHHHHHhCC---ceecCccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHH
Q 028948 60 SGGSHSLMPKPFIEEVVKRAHQHD---VYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYV 136 (201)
Q Consensus 60 g~GTs~l~p~~~L~eKI~l~~~~g---V~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI 136 (201)
..-|..++-+..+++--+.++++| +.+.+|.- ....| ..++..+.+++.|++++.+++..-+=+.+.-.+++
T Consensus 7 ~~p~~i~~G~g~~~~l~~~~~~~g~~~~liVtd~~---~~~~g--~~~~v~~~L~~~gi~~~~~~~v~~~p~~~~v~~~~ 81 (383)
T 3ox4_A 7 YIPFVNEMGEGSLEKAIKDLNGSGFKNALIVSDAF---MNKSG--VVKQVADLLKAQGINSAVYDGVMPNPTVTAVLEGL 81 (383)
T ss_dssp ECCSEEEESTTHHHHHHHTTTTSCCCEEEEEEEHH---HHHTT--HHHHHHHHHHTTTCEEEEEEEECSSCBHHHHHHHH
T ss_pred cCCCeEEECCCHHHHHHHHHHHcCCCEEEEEECCc---hhhCc--hHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHH
Confidence 333444455555666556666665 33444531 12334 56666666677777777777666666667777777
Q ss_pred HHHHHCCCeE
Q 028948 137 RLVKSAGLKA 146 (201)
Q Consensus 137 ~~~~~~Gf~v 146 (201)
+.+++.+..+
T Consensus 82 ~~~~~~~~D~ 91 (383)
T 3ox4_A 82 KILKDNNSDF 91 (383)
T ss_dssp HHHHHHTCSE
T ss_pred HHHHhcCcCE
Confidence 7777776655
No 466
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria ochroleuca} PDB: 3g6l_A*
Probab=30.73 E-value=1.1e+02 Score=26.88 Aligned_cols=49 Identities=24% Similarity=0.380 Sum_probs=31.2
Q ss_pred HHHHHHHHHhC-CceecC--ccHH-----HHHH-----HhCCchHHHHHHHHHHcCCCEEEecC
Q 028948 72 IEEVVKRAHQH-DVYVST--GDWA-----EHLI-----RNGPSAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 72 L~eKI~l~~~~-gV~v~~--Gtlf-----E~al-----~qg~~~~~eyl~~~k~lGFd~IEISd 122 (201)
+++...+-+++ +++|.. |||- ..++ ++. -++.-++.+++.|||.|.|.=
T Consensus 92 ~~~~~~lk~~~~~lKvllsiGGw~~s~~fs~~~~~~~~R~~--fi~siv~~l~~~gfDGiDiDw 153 (406)
T 3g6m_A 92 VKQLYKLKKANRSLKIMLSIGGWTWSTNFPAAASTEATRAT--FAKTAVEFMKDWGFDGIDVDW 153 (406)
T ss_dssp HHHHHHHHHHCTTCEEEEEEECSSSCTTHHHHTSSHHHHHH--HHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHCCCCeEEEEEcCCCCCchHHHHhCCHHHHHH--HHHHHHHHHHHcCCcEEEEEE
Confidence 55555554443 777665 7653 2222 122 466778888999999999983
No 467
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=30.73 E-value=71 Score=26.72 Aligned_cols=47 Identities=11% Similarity=0.004 Sum_probs=34.4
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcc
Q 028948 99 GPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 99 g~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~p 148 (201)
|....+++++.|++.|+++|=|+|=..--. ..++.+.+++.|+++.+
T Consensus 15 g~~~~~elv~~A~~~Gl~~iaiTDH~~~~g---~~~~~~~~~~~gi~vi~ 61 (292)
T 2yb1_A 15 GALTPTEVIDRAAARAPALLALTDHDCTGG---LAEAAAAAARRGIPFLN 61 (292)
T ss_dssp CSSCHHHHHHHHHTTCCSEEEECCBTCCTT---HHHHHHHHHHTTCCEEE
T ss_pred CCCCHHHHHHHHHHCCCCEEEEecCCcccc---HHHHHHHHHHcCCEEEE
Confidence 455789999999999999999998643211 23455666778988865
No 468
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=30.70 E-value=46 Score=30.62 Aligned_cols=67 Identities=9% Similarity=0.043 Sum_probs=52.9
Q ss_pred HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccccccC-CCCcccccccccccEEEecccCcCe
Q 028948 107 VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAVMFN-KSDIPSDRDRAFGAYVARAPRSTDK 180 (201)
Q Consensus 107 l~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~k~~-~~dl~ag~~~a~g~~Vi~E~Res~~ 180 (201)
+.+++..|-|+|=+.... ++.++..++++.+++.|+.+..|+.-... ...+++|++ .|-+..|.-.+
T Consensus 123 i~ea~~~GAD~ILLi~a~--l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~-----iIGinnr~L~t 190 (452)
T 1pii_A 123 IYLARYYQADACLLMLSV--LDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAK-----VVGINNRDLRD 190 (452)
T ss_dssp HHHHHHTTCSEEEEETTT--CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCS-----EEEEESEETTT
T ss_pred HHHHHHcCCCEEEEEccc--CCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCC-----EEEEeCCCCCC
Confidence 455899999999998885 56788999999999999999998864432 234667777 88888886544
No 469
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=30.58 E-value=30 Score=27.60 Aligned_cols=78 Identities=18% Similarity=0.151 Sum_probs=57.1
Q ss_pred EEEeeCccccccChhHHHHHHHHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHH
Q 028948 56 GLKFSGGSHSLMPKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLL 133 (201)
Q Consensus 56 ~lKfg~GTs~l~p~~~L~eKI~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~ 133 (201)
+-|-.+ |+++..+ |. ++++++|| .+. .|-..++|+.+- .. .+.++||+++=++|.+-+.+++...
T Consensus 98 i~K~~~--saF~~t~-L~---~~L~~~gi~~lvi~G~~T~~CV~~T--a~-----dA~~~Gy~V~vv~Da~as~~~~~h~ 164 (204)
T 3hb7_A 98 VQKRRH--SGFAHTD-LD---LYLKEEGIDTVVLTGVWTNVCVRST--AT-----DALANAYKVITLSDGTASKTEEMHE 164 (204)
T ss_dssp EEESSS--STTTTSS-HH---HHHHHTTCCEEEEEEECTTTHHHHH--HH-----HHHHTTCEEEEEEEEEECSSHHHHH
T ss_pred EeCCcc--CCccCcc-HH---HHHHHCCCCEEEEEeecccHHHHHH--HH-----HHHHCCCEEEEechhccCCCHHHHH
Confidence 557544 3344332 43 45577898 344 477889998885 43 4678899999999999999999999
Q ss_pred HHHHHHHHCCCeEc
Q 028948 134 RYVRLVKSAGLKAK 147 (201)
Q Consensus 134 ~lI~~~~~~Gf~v~ 147 (201)
..++..+ .|-.|.
T Consensus 165 ~al~~l~-~~a~v~ 177 (204)
T 3hb7_A 165 YGLNDLS-IFTKVM 177 (204)
T ss_dssp HHHHHHH-HHSEEE
T ss_pred HHHHHHH-hCCEEe
Confidence 9999888 777763
No 470
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=30.57 E-value=1e+02 Score=25.94 Aligned_cols=49 Identities=18% Similarity=0.152 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHcCCCEEEecC-----------CcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNV-----------GSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISd-----------Gti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.+.++++...+.|.+.|.+-. |....+.++..++++.+++.|+.+....
T Consensus 177 ~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~ 236 (418)
T 2qs8_A 177 EVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVHA 236 (418)
T ss_dssp HHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 345566666667888888742 3456888999999999999999985554
No 471
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=30.56 E-value=72 Score=27.30 Aligned_cols=40 Identities=10% Similarity=0.130 Sum_probs=0.0
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcc----cCChhHHHHHHHHHHH
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGSL----EIPEETLLRYVRLVKS 141 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGti----~i~~~~r~~lI~~~~~ 141 (201)
+.+.++++++-+-|.+.| +-.||. .|+.++|.++++.+.+
T Consensus 29 ~~l~~lv~~li~~Gv~Gl-~v~GtTGE~~~Lt~~Er~~v~~~~v~ 72 (313)
T 3dz1_A 29 VSIDRLTDFYAEVGCEGV-TVLGILGEAPKLDAAEAEAVATRFIK 72 (313)
T ss_dssp HHHHHHHHHHHHTTCSEE-EESTGGGTGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEE-EeCccCcChhhCCHHHHHHHHHHHHH
No 472
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=30.53 E-value=1.1e+02 Score=25.56 Aligned_cols=91 Identities=12% Similarity=0.026 Sum_probs=0.0
Q ss_pred CCceeEecCCCCCCcchhHHHHHHHhhcccccEEEeeCccccccChhHHHHHHHHHHhCC-ceecC-ccHHHHHHHhCCc
Q 028948 24 FGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHD-VYVST-GDWAEHLIRNGPS 101 (201)
Q Consensus 24 ~GlTmV~DkG~s~~~g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~g-V~v~~-GtlfE~al~qg~~ 101 (201)
.|+|-++|.+. ........+.++..++.+++++ +.+++ |++---.-.....
T Consensus 79 ~GvTt~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (426)
T 2z00_A 79 GGYTDLVSMPN---------------------------TKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLT 131 (426)
T ss_dssp TTEEEEEECSC---------------------------SSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBC
T ss_pred CCccEEEecCC---------------------------CCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHH
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeE
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
.++++++. |...+-- ++....+.+...++++.+++.|+.+
T Consensus 132 ~~~~l~~~----g~~~i~~-~~~~~~~~~~l~~~~~~a~~~g~~v 171 (426)
T 2z00_A 132 PAGLLREA----GAVLLTD-DGRTNEDAGVLAAGLLMAAPLGLPV 171 (426)
T ss_dssp CHHHHHHH----TCCEEEC-TTSCCCCHHHHHHHHHHHGGGTCCE
T ss_pred HHHHHHHc----CCEEEEC-CCcCCCCHHHHHHHHHHHHhhCCEE
No 473
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=30.51 E-value=1.2e+02 Score=26.11 Aligned_cols=106 Identities=15% Similarity=0.249 Sum_probs=65.3
Q ss_pred CCCCCCcchhHHHHHHHhh--cccc---cEEEeeCccccccChhHHHHHHHHHHhC--Ccee--cCccHHHHHHHhCCch
Q 028948 32 PHYTLSSSHNVLEDIFESM--GQFV---DGLKFSGGSHSLMPKPFIEEVVKRAHQH--DVYV--STGDWAEHLIRNGPSA 102 (201)
Q Consensus 32 kG~s~~~g~~~l~DlLe~a--g~yI---D~lKfg~GTs~l~p~~~L~eKI~l~~~~--gV~v--~~GtlfE~al~qg~~~ 102 (201)
|.+|+. .-...++..+++ |.-| -.=. --|..++ +.+..++-++..+++ |+.+ .+|++.+. .
T Consensus 27 P~lPvT-peEia~~A~~a~~AGAaivHlHvRd-~~G~ps~-d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~-------~ 96 (282)
T 2y7e_A 27 PNLPIT-PEEQAKEAKACFEAGARVIHLHIRE-DDGRPSQ-RLDRFQEAISAIREVVPEIIIQISTGGAVGE-------S 96 (282)
T ss_dssp TTCCCS-HHHHHHHHHHHHHHTEEEEEECEEC-TTSCEEC-CHHHHHHHHHHHHHHCTTSEEEECSSCSTTC-------C
T ss_pred CCCCCC-HHHHHHHHHHHHHcCCcEEEEeecC-CCCCcCC-CHHHHHHHHHHHHHHCCCeEEEeCCCCCCCC-------C
Confidence 455444 445555555542 3221 1111 2344444 445689999998876 6744 45655431 3
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCCh-------hHHHHHHHHHHHCCCeEcc
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLEIPE-------ETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~i~~-------~~r~~lI~~~~~~Gf~v~p 148 (201)
.++=+... ++.=|..-++-||+.+++ +.-.++.+.+++.|.++..
T Consensus 97 ~eeR~~~~-~~~Pe~asl~~gs~Nf~~~v~~n~~~~~~~~~~~~~e~Gv~pE~ 148 (282)
T 2y7e_A 97 FDKRLAPL-ALKPEMATLNAGTLNFGDDIFINHPADIIRLAEAFKQYNVVPEV 148 (282)
T ss_dssp HHHHHGGG-GGCCSEEEEECCCEEETTEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHh-hcCCCEEEecccccccccccccCCHHHHHHHHHHHHHcCCeEEE
Confidence 34444444 577799999999888776 7778899999999887733
No 474
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=30.50 E-value=1e+02 Score=26.26 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=71.0
Q ss_pred hHHHHHHHhhcccccEEE-ee---CccccccChhHHHHHHHHHHhCCceecCccHHHHHHHhCCchHHHHHHHHHHcCCC
Q 028948 41 NVLEDIFESMGQFVDGLK-FS---GGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPSAFKEYVEDCKQVGFD 116 (201)
Q Consensus 41 ~~l~DlLe~ag~yID~lK-fg---~GTs~l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~~~~eyl~~~k~lGFd 116 (201)
.+.++.++.-++=||++= +| -|..-.+- +.|++..+.++++|+.+ =-.+|.++...++.+..-.+.|.+.|-|
T Consensus 89 ~E~~~Av~~GAdEIDmVinig~l~~g~~~~v~-~ei~~v~~a~~~~g~~l--KvIlEt~~L~d~e~i~~a~~ia~eaGAD 165 (260)
T 1p1x_A 89 AETRAAIAYGADEVDVVFPYRALMAGNEQVGF-DLVKACKEACAAANVLL--KVIIETGELKDEALIRKASEISIKAGAD 165 (260)
T ss_dssp HHHHHHHHHTCSEEEEECCHHHHHTTCCHHHH-HHHHHHHHHHHHTTCEE--EEECCHHHHCSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEeccHHhhhCCCHHHHH-HHHHHHHHHhcccCCeE--EEEEecccCCcHHHHHHHHHHHHHhCCC
Confidence 577888998899999874 44 22222222 23777778888776531 1135777777644477889999999999
Q ss_pred EEEecCCcccC--ChhHHHHHHHHH-HH----CCCeEcccccccc
Q 028948 117 TIELNVGSLEI--PEETLLRYVRLV-KS----AGLKAKPKFAVMF 154 (201)
Q Consensus 117 ~IEISdGti~i--~~~~r~~lI~~~-~~----~Gf~v~pE~g~k~ 154 (201)
.|--|.|+..- +.++= ++.+++ ++ ....||+-=|++.
T Consensus 166 fVKTSTGf~~~gAt~e~v-~lm~~~I~~~~~g~~v~VKaaGGIrt 209 (260)
T 1p1x_A 166 FIKTSTGKVAVNATPESA-RIMMEVIRDMGVEKTVGFKPAGGVRT 209 (260)
T ss_dssp EEECCCSCSSCCCCHHHH-HHHHHHHHHHTCTTTCEEECBSSCCS
T ss_pred EEEeCCCCCCCCCCHHHH-HHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 99999999754 55533 333333 32 2355555556654
No 475
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=30.48 E-value=1.1e+02 Score=26.59 Aligned_cols=45 Identities=4% Similarity=0.046 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeE
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKA 146 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v 146 (201)
..++..+.+++.|+++++++++.-+=+.+.-.++++.+++.+..+
T Consensus 51 ~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~~~d~ 95 (387)
T 3bfj_A 51 AVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRREQCDI 95 (387)
T ss_dssp SHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhcCCCE
Confidence 455555556667777777776666666677777777777776655
No 476
>3olc_X DNA topoisomerase 2-binding protein 1; BRCT domain, DNA repair, RAD9, DNA binding protein; HET: DNA; 2.40A {Homo sapiens} PDB: 2xnk_A* 2xnh_A*
Probab=30.45 E-value=32 Score=29.41 Aligned_cols=121 Identities=15% Similarity=0.055 Sum_probs=76.1
Q ss_pred CCCceeEecCCCCCCcchhHHHHHHHhhcccccEEEee-CccccccChhHHHHHHHHHHhCCceecCccHHHHHHHhCCc
Q 028948 23 RFGVTEMRSPHYTLSSSHNVLEDIFESMGQFVDGLKFS-GGSHSLMPKPFIEEVVKRAHQHDVYVSTGDWAEHLIRNGPS 101 (201)
Q Consensus 23 ~~GlTmV~DkG~s~~~g~~~l~DlLe~ag~yID~lKfg-~GTs~l~p~~~L~eKI~l~~~~gV~v~~GtlfE~al~qg~~ 101 (201)
-.|++.+.. |++.. ....+.++++.+|.-+-- .+. --|+.+... .--.|...|.+.||++..=.|++.++.++
T Consensus 106 l~g~~~~~t-G~~~~-~r~~l~~~i~~~GG~v~~-~~t~~tTHLI~~~-~~t~Ky~~A~~~gi~IV~~~Wl~~c~~~~-- 179 (298)
T 3olc_X 106 MSDVTISCT-SLEKE-KREEVHKYVQMMGGRVYR-DLNVSVTHLIAGE-VGSKKYLVAANLKKPILLPSWIKTLWEKS-- 179 (298)
T ss_dssp TTTCEEEEE-SCCHH-HHHHHHHHHHHTTCEECS-SCCTTCCEEEESS-SCSHHHHHHHHTTCCEECHHHHHHHHHHH--
T ss_pred cCCeEEEeC-CCcHH-hHHHHHHHHHHCCCEEec-CcCCCeeEEEEeC-CCChHHHHHHHCCCeEeeHHHHHHHHHcC--
Confidence 358888884 65333 456778888887654321 122 223344433 23478889999999999989999999886
Q ss_pred hHH---HH----HHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEccccc
Q 028948 102 AFK---EY----VEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 102 ~~~---ey----l~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
+.- .| ++.-+..-|..+-|.-. .++..+|.++.+.+...|=++.+.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~f~g~~i~~t--G~~~~~r~~l~~li~~~GG~~~~~ls 234 (298)
T 3olc_X 180 QEKKITRYTDINMEDFKCPIFLGCIICVT--GLCGLDRKEVQQLTVKHGGQYMGQLK 234 (298)
T ss_dssp HTTCCSSGGGSCGGGGBCCTTTTCEEEEC--SCCHHHHHHHHHHHHHTTCEECSSCC
T ss_pred CcCCcccccccccccccccccCCeEEEEe--CCCCccHHHHHHHHHHcCCEEeceec
Confidence 211 11 11112222444443322 24566899999999999999988765
No 477
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=30.35 E-value=84 Score=26.40 Aligned_cols=74 Identities=12% Similarity=0.081 Sum_probs=35.8
Q ss_pred ChhHHHHHHHHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCe
Q 028948 68 PKPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK 145 (201)
Q Consensus 68 p~~~L~eKI~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~ 145 (201)
+.+.+++-++.+-++|| -++ .||=-|.+.... +.-.+.++.+.+.-=. |=.|+-..+.++=.++.+.+++.|..
T Consensus 17 D~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~-~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gad 92 (286)
T 2r91_A 17 DPELFANHVKNITSKGVDVVFVAGTTGLGPALSL-QEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAE 92 (286)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCH-HHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECccccChhhCCH-HHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCC
Confidence 34456666776666666 222 354444332211 1223333333332111 33455555566666666666666654
No 478
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=30.33 E-value=83 Score=26.77 Aligned_cols=50 Identities=12% Similarity=0.125 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHHC---CCeEccccc
Q 028948 102 AFKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKSA---GLKAKPKFA 151 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdG---ti~i~~~~r~~lI~~~~~~---Gf~v~pE~g 151 (201)
.+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+. ...|..-+|
T Consensus 33 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg 88 (303)
T 2wkj_A 33 SLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG 88 (303)
T ss_dssp HHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC
Confidence 5666777777777777766432 3367777777777776653 244544333
No 479
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=30.32 E-value=63 Score=29.48 Aligned_cols=39 Identities=26% Similarity=0.296 Sum_probs=24.8
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCe
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK 145 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~ 145 (201)
-++.+.+.++||+.||+. +-..++.++ +.++.+.+.+++
T Consensus 64 l~Ia~~L~~~Gv~~IEvG--~P~asp~d~-~~~~~i~~~~~~ 102 (423)
T 3ivs_A 64 IQIAKALDNFGVDYIELT--SPVASEQSR-QDCEAICKLGLK 102 (423)
T ss_dssp HHHHHHHHHHTCSEEEEC--CTTSCHHHH-HHHHHHHTSCCS
T ss_pred HHHHHHHHHcCCCEEEEe--ecccCHHHH-HHHHHHHhcCCC
Confidence 456666777888888883 334445554 566666666655
No 480
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.26 E-value=71 Score=27.47 Aligned_cols=40 Identities=18% Similarity=0.147 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHcCCCEEEecCCc---ccCChhHHHHHHHHHHH
Q 028948 102 AFKEYVEDCKQVGFDTIELNVGS---LEIPEETLLRYVRLVKS 141 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEISdGt---i~i~~~~r~~lI~~~~~ 141 (201)
.++++++++-+-|.+.|=+.-.| ..|+.++|.++++.+.+
T Consensus 45 ~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~ 87 (314)
T 3qze_A 45 SLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVD 87 (314)
T ss_dssp HHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 45666666666677766553222 35667777777666554
No 481
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=30.11 E-value=32 Score=25.96 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=34.0
Q ss_pred chHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEc
Q 028948 101 SAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAK 147 (201)
Q Consensus 101 ~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~ 147 (201)
+...+.+++|.+.|...|=++.|+.+ .++.+.++++|+++.
T Consensus 81 ~~~~~v~~~~~~~gi~~i~~~~g~~~------~~~~~~a~~~Gir~v 121 (140)
T 1iuk_A 81 SALMDHLPEVLALRPGLVWLQSGIRH------PEFEKALKEAGIPVV 121 (140)
T ss_dssp HHHTTTHHHHHHHCCSCEEECTTCCC------HHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCcCH------HHHHHHHHHcCCEEE
Confidence 36778888999999999988888862 578889999999874
No 482
>3ie7_A LIN2199 protein; phosphofructokinases, transferase, glycero ION, PSI-II, NYSGXRC, kinase, structural genomics, structure initiative; HET: ATP; 1.60A {Listeria innocua} PDB: 3hic_A* 3jul_A* 3q1y_A
Probab=29.89 E-value=1.1e+02 Score=25.03 Aligned_cols=62 Identities=10% Similarity=0.164 Sum_probs=39.9
Q ss_pred ceeEecCCCCCCcchhHHHHHHHh---hcccccEEEeeCccccccChhHHHHHHHHHHhCCceecCc
Q 028948 26 VTEMRSPHYTLSSSHNVLEDIFES---MGQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVSTG 89 (201)
Q Consensus 26 lTmV~DkG~s~~~g~~~l~DlLe~---ag~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~G 89 (201)
-|++.++|.. . .+..++++++. .-.-.|++-+.+-...-.+.+.+.+.++.++++|++++.-
T Consensus 105 ~~~~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~a~~~g~~v~~D 169 (320)
T 3ie7_A 105 STMIPEAGFT-V-SQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKATGAFLGCD 169 (320)
T ss_dssp CEEEECCCCC-C-CHHHHHHHHHHHHHHCCTTCEEEEESCCCTTCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred eEEEeCCCCC-C-CHHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCEEEEE
Confidence 4667777742 2 34455555443 2334688888543333345678999999999999988753
No 483
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A {Bacillus circulans} SCOP: c.1.8.5 d.26.3.1
Probab=29.51 E-value=1.7e+02 Score=25.85 Aligned_cols=49 Identities=16% Similarity=0.305 Sum_probs=30.7
Q ss_pred HHHHHHHHHh-CCceecC--ccH-----HHHHHHhCC----chHHHHHHHHHHcCCCEEEec
Q 028948 72 IEEVVKRAHQ-HDVYVST--GDW-----AEHLIRNGP----SAFKEYVEDCKQVGFDTIELN 121 (201)
Q Consensus 72 L~eKI~l~~~-~gV~v~~--Gtl-----fE~al~qg~----~~~~eyl~~~k~lGFd~IEIS 121 (201)
+++..+|-++ .+++|.. ||| |..++. .+ .-++.-++.+++.|||.|.|.
T Consensus 110 ~~~l~~lk~~~p~lKvllsiGGw~~s~~fs~~~~-~~~~R~~Fi~s~v~~l~~~~fDGiDiD 170 (419)
T 1itx_A 110 INQLNKLKQTNPNLKTIISVGGWTWSNRFSDVAA-TAATREVFANSAVDFLRKYNFDGVDLD 170 (419)
T ss_dssp HHHHHHHHHHSTTCEEEEEEECSSSCTTHHHHHT-SHHHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEEcCCCCcchhhHHhc-CHHHHHHHHHHHHHHHHHcCCCceEEe
Confidence 5555555444 4676654 766 333321 11 146677888999999999996
No 484
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=29.42 E-value=84 Score=30.52 Aligned_cols=17 Identities=24% Similarity=0.339 Sum_probs=9.5
Q ss_pred HHHHHHHHHHhCCceec
Q 028948 71 FIEEVVKRAHQHDVYVS 87 (201)
Q Consensus 71 ~L~eKI~l~~~~gV~v~ 87 (201)
.+++.++.|+++||.|.
T Consensus 187 ei~elv~yA~~rgI~vv 203 (716)
T 2cho_A 187 QLQELVAVANENEVDFV 203 (716)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCEEE
Confidence 35556666666666443
No 485
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=29.36 E-value=56 Score=28.74 Aligned_cols=50 Identities=14% Similarity=0.064 Sum_probs=36.6
Q ss_pred CCchHHHHHHHHHHcCCCEEEecCCccc------CCh---hHHHHHHHHHHHCCCeEcc
Q 028948 99 GPSAFKEYVEDCKQVGFDTIELNVGSLE------IPE---ETLLRYVRLVKSAGLKAKP 148 (201)
Q Consensus 99 g~~~~~eyl~~~k~lGFd~IEISdGti~------i~~---~~r~~lI~~~~~~Gf~v~p 148 (201)
|....+++++.|++.|++.|=|+|=... +.+ ....++.+.+++.|+++.|
T Consensus 32 g~~~~~elv~~A~~~Gl~~iaiTDH~~~~~~~~~~~~d~~~g~~~~~~~a~~~gi~vi~ 90 (343)
T 3e38_A 32 GLVWPTVRVDEAYRDGLDAISLTEHIEYRPHKQDVVSDHNRSFDLCREQAEKLGILLIK 90 (343)
T ss_dssp CSBCHHHHHHHHHHTTCSEECCEEESSCCTTTTTBCCCTTHHHHHHHHHHHHHTCEECC
T ss_pred CCCCHHHHHHHHHHcCCCEEEECCCCcccccccccchhHHHHHHHHHHHHHhCCCEEEE
Confidence 4557889999999999999999887322 211 3344566677788999976
No 486
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=29.24 E-value=49 Score=30.73 Aligned_cols=86 Identities=9% Similarity=0.008 Sum_probs=54.3
Q ss_pred cccccE--EEeeCccccccChhHHHHHHHHHHhCCceecC-c-cHHHHHHHh----CCchHHHHHHHHHHcCCCEEEecC
Q 028948 51 GQFVDG--LKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST-G-DWAEHLIRN----GPSAFKEYVEDCKQVGFDTIELNV 122 (201)
Q Consensus 51 g~yID~--lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~-G-tlfE~al~q----g~~~~~eyl~~~k~lGFd~IEISd 122 (201)
|.-+|- .+||+-|..+-... ..=+|.+++. | .+-+..... .++.+.+=++.+|++||++|.+|-
T Consensus 294 g~~~D~~~~~~G~R~i~~~~~~--------f~lNG~~~~l~G~~~h~~~~~~g~~~~~~~~~~d~~~~k~~G~N~vR~~h 365 (613)
T 3hn3_A 294 GPVSDFYTLPVGIRTVAVTKSQ--------FLINGKPFYFHGVNKHEDADIRGKGFDWPLLVKDFNLLRWLGANAFRTSH 365 (613)
T ss_dssp EEEEEEEEEEECCCCEEECSSC--------EEETTEEECEEEEECCSCBTTTBTCCCHHHHHHHHHHHHHHTCCEEECTT
T ss_pred CceEEEEEeccCceEEEEECCE--------EEECCEEeeeceeeecCCccccCccCCHHHHHHHHHHHHHcCCCEEEccC
Confidence 566775 47888888776431 2235666665 5 243321111 112455567889999999999852
Q ss_pred CcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 123 GSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 123 Gti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.|.++ ++.+.+-+.||.|..|.
T Consensus 366 ----~p~~~--~~~~~cD~~Gi~V~~e~ 387 (613)
T 3hn3_A 366 ----YPYAE--EVMQMCDRYGIVVIDEC 387 (613)
T ss_dssp ----SCCCH--HHHHHHHHHTCEEEEEC
T ss_pred ----CCChH--HHHHHHHHCCCEEEEec
Confidence 34333 57888999999997765
No 487
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=29.24 E-value=38 Score=28.49 Aligned_cols=81 Identities=17% Similarity=0.176 Sum_probs=51.5
Q ss_pred HHHHHHHhh-cccccEEEeeCccccccChhHHHHHHHHHHhCCceecC------ccHHHHHHHhCCchHHHHHHHHHHcC
Q 028948 42 VLEDIFESM-GQFVDGLKFSGGSHSLMPKPFIEEVVKRAHQHDVYVST------GDWAEHLIRNGPSAFKEYVEDCKQVG 114 (201)
Q Consensus 42 ~l~DlLe~a-g~yID~lKfg~GTs~l~p~~~L~eKI~l~~~~gV~v~~------GtlfE~al~qg~~~~~eyl~~~k~lG 114 (201)
.++..++.. .+|||+= . -.++ .+++.++.+|++++++-- +|.- . +.+.+.++.+.++|
T Consensus 105 ll~~~~~~g~~d~iDvE---l----~~~~-~~~~l~~~~~~~~~kvI~S~Hdf~~tP~-----~--~el~~~~~~~~~~g 169 (257)
T 2yr1_A 105 LIEAICRSGAIDLVDYE---L----AYGE-RIADVRRMTEECSVWLVVSRHYFDGTPR-----K--ETLLADMRQAERYG 169 (257)
T ss_dssp HHHHHHHHTCCSEEEEE---G----GGTT-HHHHHHHHHHHTTCEEEEEEEESSCCCC-----H--HHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCCEEEEE---C----CCCh-hHHHHHHHHHhCCCEEEEEecCCCCCcC-----H--HHHHHHHHHHHhcC
Confidence 344445544 6677762 1 2244 688999999999986532 3321 1 25677788999999
Q ss_pred CCEEEecCCcccCChhHHHHHHHHH
Q 028948 115 FDTIELNVGSLEIPEETLLRYVRLV 139 (201)
Q Consensus 115 Fd~IEISdGti~i~~~~r~~lI~~~ 139 (201)
.|.+-|--=. -+.+|=+++.+..
T Consensus 170 aDivKia~~a--~s~~D~l~ll~~~ 192 (257)
T 2yr1_A 170 ADIAKVAVMP--KSPEDVLVLLQAT 192 (257)
T ss_dssp CSEEEEEECC--SSHHHHHHHHHHH
T ss_pred CCEEEEEecc--CCHHHHHHHHHHH
Confidence 9999986533 3455556666543
No 488
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=29.19 E-value=26 Score=28.66 Aligned_cols=37 Identities=14% Similarity=0.003 Sum_probs=29.8
Q ss_pred chhHHHHHHHhhcccccEEEeeCccccccChhHHHHH
Q 028948 39 SHNVLEDIFESMGQFVDGLKFSGGSHSLMPKPFIEEV 75 (201)
Q Consensus 39 g~~~l~DlLe~ag~yID~lKfg~GTs~l~p~~~L~eK 75 (201)
.+....++++..++++|++|+|.+-+.-+..+.+++.
T Consensus 16 ~~~~a~~~~~~~~~~~~~ikvg~~lf~~~G~~~v~~l 52 (221)
T 3exr_A 16 NLKGAITAAVSVGNEVDVIEAGTVCLLQVGSELVEVL 52 (221)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECHHHHHHHCTHHHHHH
T ss_pred CHHHHHHHHHhhCCCceEEEECHHHHHhcCHHHHHHH
Confidence 6678889999999999999999887766666666554
No 489
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=29.15 E-value=70 Score=28.29 Aligned_cols=40 Identities=20% Similarity=0.270 Sum_probs=26.9
Q ss_pred HHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCe
Q 028948 103 FKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK 145 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~ 145 (201)
.-++.+.+.++||+.||+ |+-..++.++ +.++.+++.+++
T Consensus 27 k~~ia~~L~~~Gv~~IE~--g~p~~~~~~~-~~~~~i~~~~~~ 66 (382)
T 2ztj_A 27 KVEIAKALDEFGIEYIEV--TTPVASPQSR-KDAEVLASLGLK 66 (382)
T ss_dssp HHHHHHHHHHHTCSEEEE--CCTTSCHHHH-HHHHHHHTSCCS
T ss_pred HHHHHHHHHHcCcCEEEE--cCCcCCHHHH-HHHHHHHhcCCC
Confidence 445677778889999999 3433445554 667777777665
No 490
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=29.11 E-value=97 Score=25.89 Aligned_cols=48 Identities=21% Similarity=0.257 Sum_probs=38.8
Q ss_pred HHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 104 KEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 104 ~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
++.++.+.+.|.|+|||. ||..+..+.-.++++++++..+.+.-+-+-
T Consensus 21 ~~~~~~~~~~GtD~i~vG-Gs~gvt~~~~~~~v~~ik~~~~Pvvlfp~~ 68 (228)
T 3vzx_A 21 DEQLEILCESGTDAVIIG-GSDGVTEDNVLRMMSKVRRFLVPCVLEVSA 68 (228)
T ss_dssp TTHHHHHHTSSCSEEEEC-CCSCCCHHHHHHHHHHHTTSSSCEEEECSC
T ss_pred HHHHHHHHHcCCCEEEEC-CcCCCCHHHHHHHHHHhhccCCCEEEeCCC
Confidence 356677789999999997 588889999999999999877777555554
No 491
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=29.03 E-value=78 Score=26.70 Aligned_cols=39 Identities=13% Similarity=0.164 Sum_probs=16.8
Q ss_pred HHHHHHHHHHcCCCEEEecCC---cccCChhHHHHHHHHHHH
Q 028948 103 FKEYVEDCKQVGFDTIELNVG---SLEIPEETLLRYVRLVKS 141 (201)
Q Consensus 103 ~~eyl~~~k~lGFd~IEISdG---ti~i~~~~r~~lI~~~~~ 141 (201)
+.++++++-+-|.+.|=+.-. +..|+.++|.++++.+.+
T Consensus 22 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~ 63 (288)
T 2nuw_A 22 LKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYD 63 (288)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHH
Confidence 344444444444444443322 123444444444444443
No 492
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=28.92 E-value=98 Score=26.66 Aligned_cols=83 Identities=13% Similarity=0.144 Sum_probs=52.0
Q ss_pred cccChhHHHHHHHHHHhCCceecC--c--cHHH--------HHHHhC----C-----chHHHHHHHHHHcCCCEEEecCC
Q 028948 65 SLMPKPFIEEVVKRAHQHDVYVST--G--DWAE--------HLIRNG----P-----SAFKEYVEDCKQVGFDTIELNVG 123 (201)
Q Consensus 65 ~l~p~~~L~eKI~l~~~~gV~v~~--G--tlfE--------~al~qg----~-----~~~~eyl~~~k~lGFd~IEISdG 123 (201)
...+.+.+++-++.++++|+.+.. - .+.+ .....+ | ..+.+.+..++..|.. +.|+-
T Consensus 153 ~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~-~~i~H- 230 (424)
T 3gri_A 153 GVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCH-YHVCH- 230 (424)
T ss_dssp CCCSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCC-EEECS-
T ss_pred CcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCc-EEEEe-
Confidence 445677888999999999876653 1 2211 000000 0 1355566778888875 44433
Q ss_pred cccCChhHHHHHHHHHHHCCCeEcccccc
Q 028948 124 SLEIPEETLLRYVRLVKSAGLKAKPKFAV 152 (201)
Q Consensus 124 ti~i~~~~r~~lI~~~~~~Gf~v~pE~g~ 152 (201)
++..+-.++|+.+++.|+.|..|.-.
T Consensus 231 ---~s~~~~~~~i~~ak~~G~~v~~e~~p 256 (424)
T 3gri_A 231 ---VSTKESVRVIRDAKRAGIHVTAEVTP 256 (424)
T ss_dssp ---CCCHHHHHHHHHHHHTTCCEEEEECH
T ss_pred ---CCCHHHHHHHHHHHHcCCCEEEEecH
Confidence 34566679999999999998666543
No 493
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=28.89 E-value=1.6e+02 Score=26.24 Aligned_cols=77 Identities=8% Similarity=0.101 Sum_probs=57.3
Q ss_pred cChhHHHHHHHHHHhCCceecC---c-cHHHHHHHhCCchH---------HHHHHHHHHcCCCEEEecCCcccCChhHHH
Q 028948 67 MPKPFIEEVVKRAHQHDVYVST---G-DWAEHLIRNGPSAF---------KEYVEDCKQVGFDTIELNVGSLEIPEETLL 133 (201)
Q Consensus 67 ~p~~~L~eKI~l~~~~gV~v~~---G-tlfE~al~qg~~~~---------~eyl~~~k~lGFd~IEISdGti~i~~~~r~ 133 (201)
++.+.+++..+.+++.|+.+.+ . .=+|.+...+.+.+ -.+|+++.+.|-..| +|.|. . +.+++.
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPvi-LstGm-s-tl~Ei~ 151 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVV-ASTAG-A-RREDID 151 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEE-EECTT-C-CHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEE-EECCC-C-CHHHHH
Confidence 7888899999999999997665 3 33444433322111 258999999999888 99997 4 889999
Q ss_pred HHHHHHHHCCCeE
Q 028948 134 RYVRLVKSAGLKA 146 (201)
Q Consensus 134 ~lI~~~~~~Gf~v 146 (201)
..++.+.+.|=.+
T Consensus 152 ~Ave~i~~~g~~v 164 (350)
T 3g8r_A 152 KVVSFMLHRGKDL 164 (350)
T ss_dssp HHHHHHHTTTCCE
T ss_pred HHHHHHHHcCCCE
Confidence 9999998877433
No 494
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=28.84 E-value=81 Score=26.59 Aligned_cols=38 Identities=11% Similarity=0.213 Sum_probs=16.8
Q ss_pred HHHHHHHHHH-cCCCEEEecCC---cccCChhHHHHHHHHHH
Q 028948 103 FKEYVEDCKQ-VGFDTIELNVG---SLEIPEETLLRYVRLVK 140 (201)
Q Consensus 103 ~~eyl~~~k~-lGFd~IEISdG---ti~i~~~~r~~lI~~~~ 140 (201)
+.++++++-+ -|.+.|=+.-. +..|+.++|.++++.+.
T Consensus 26 l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~ 67 (293)
T 1f6k_A 26 LRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAK 67 (293)
T ss_dssp HHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHH
Confidence 3444444444 45554444322 12345555555544444
No 495
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=28.71 E-value=50 Score=28.69 Aligned_cols=34 Identities=15% Similarity=0.278 Sum_probs=18.8
Q ss_pred HHHH-HHHHcCCCEEEecCCcccCChhHHHHHHHHHHH
Q 028948 105 EYVE-DCKQVGFDTIELNVGSLEIPEETLLRYVRLVKS 141 (201)
Q Consensus 105 eyl~-~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~ 141 (201)
++.+ .+.++|++.||+ |+-..+++++ +.|+++++
T Consensus 45 ~i~~~~L~~~Gv~~IE~--g~~~~~~~~~-~~v~~~~~ 79 (337)
T 3ble_A 45 NIAKFLLQKLNVDRVEI--ASARVSKGEL-ETVQKIME 79 (337)
T ss_dssp HHHHHHHHTTCCSEEEE--EETTSCTTHH-HHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEE--eCCCCChhHH-HHHHHHHh
Confidence 4455 666778888887 3333344444 34444444
No 496
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=28.63 E-value=1.3e+02 Score=25.14 Aligned_cols=49 Identities=16% Similarity=0.236 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHcCCCEEEec-C----------CcccCChhHHHHHHHHHHHCCCeEcccc
Q 028948 102 AFKEYVEDCKQVGFDTIELN-V----------GSLEIPEETLLRYVRLVKSAGLKAKPKF 150 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEIS-d----------Gti~i~~~~r~~lI~~~~~~Gf~v~pE~ 150 (201)
.+.++++++.+.|.+.|.+- + |....+.++..++++.+++.|+.+....
T Consensus 167 ~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~ 226 (408)
T 3be7_A 167 EARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHA 226 (408)
T ss_dssp HHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 45566676777888888764 1 2356788889999999999999985543
No 497
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=28.55 E-value=60 Score=26.22 Aligned_cols=45 Identities=16% Similarity=0.059 Sum_probs=34.4
Q ss_pred HHHH-HHcCCCEEEecCCc--ccCChhHHHHHHHHHHHCCCeEccccc
Q 028948 107 VEDC-KQVGFDTIELNVGS--LEIPEETLLRYVRLVKSAGLKAKPKFA 151 (201)
Q Consensus 107 l~~~-k~lGFd~IEISdGt--i~i~~~~r~~lI~~~~~~Gf~v~pE~g 151 (201)
+++| +++||..||+.-.. ..+..+....+++.+++.|+.|....+
T Consensus 109 l~~~~~~~g~~gi~~~~~~~~~~~~~~~~~~~~~~a~~~~lpv~iH~~ 156 (307)
T 2f6k_A 109 VQQALDQDGALGVTVPTNSRGLYFGSPVLERVYQELDARQAIVALHPN 156 (307)
T ss_dssp HHHHHHTSCCSEEEEESEETTEETTCGGGHHHHHHHHTTTCEEEEECC
T ss_pred HHHHHhccCCcEEEEeccCCCCCCCcHhHHHHHHHHHHcCCeEEECCC
Confidence 4444 56899999997543 466778888999999999999866555
No 498
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=28.53 E-value=1.4e+02 Score=26.32 Aligned_cols=49 Identities=12% Similarity=0.235 Sum_probs=36.2
Q ss_pred HHHHHHHHcCCCEEEecCCcccCChhHH----HHHHHHHHHCCCeEccccccccC
Q 028948 105 EYVEDCKQVGFDTIELNVGSLEIPEETL----LRYVRLVKSAGLKAKPKFAVMFN 155 (201)
Q Consensus 105 eyl~~~k~lGFd~IEISdGti~i~~~~r----~~lI~~~~~~Gf~v~pE~g~k~~ 155 (201)
+.+..|-+.||+.|=|.--. +|.++= .++++.++..|..|-.|+|.=-+
T Consensus 89 e~i~~ai~~GFtSVMiDgS~--~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg 141 (323)
T 2isw_A 89 ESVKMAIDLGFSSVMIDASH--HPFDENVRITKEVVAYAHARSVSVEAELGTLGG 141 (323)
T ss_dssp HHHHHHHHTTCSEEEECCTT--SCHHHHHHHHHHHHHHHHTTTCEEEEEESCC--
T ss_pred HHHHHHHHcCCCeEEecCCC--CCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccC
Confidence 45777889999999886544 454443 36788899999999999997543
No 499
>4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A*
Probab=28.45 E-value=1e+02 Score=28.15 Aligned_cols=46 Identities=17% Similarity=0.265 Sum_probs=34.6
Q ss_pred hHHHHHHHHHHcCCCEEEec--------CCcccCChhHH---HHHHHHHHHCCCeEc
Q 028948 102 AFKEYVEDCKQVGFDTIELN--------VGSLEIPEETL---LRYVRLVKSAGLKAK 147 (201)
Q Consensus 102 ~~~eyl~~~k~lGFd~IEIS--------dGti~i~~~~r---~~lI~~~~~~Gf~v~ 147 (201)
++++=++.++++||+++-+| +|.-.+.++.. .++|+.++++|+++.
T Consensus 59 ry~eDi~l~~~lG~~~~R~si~W~Ri~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~ 115 (444)
T 4hz8_A 59 RYEQDLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPM 115 (444)
T ss_dssp HHHHHHHHHHHHTCSEEEEECCHHHHSCSTTCCCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hHHHHHHHHHhcCCCEEEEeccHHHcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEE
Confidence 46777889999999999887 34334444433 688999999999984
No 500
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=28.33 E-value=87 Score=26.38 Aligned_cols=76 Identities=12% Similarity=0.062 Sum_probs=33.0
Q ss_pred hhHHHHHHHHHHhCCc-eec-CccHHHHHHHhCCchHHHHHHHHHHcCCCEEEecCCcccCChhHHHHHHHHHHHCCCe
Q 028948 69 KPFIEEVVKRAHQHDV-YVS-TGDWAEHLIRNGPSAFKEYVEDCKQVGFDTIELNVGSLEIPEETLLRYVRLVKSAGLK 145 (201)
Q Consensus 69 ~~~L~eKI~l~~~~gV-~v~-~GtlfE~al~qg~~~~~eyl~~~k~lGFd~IEISdGti~i~~~~r~~lI~~~~~~Gf~ 145 (201)
.+.+++-++.+-++|| -++ .||=-|.+.... +.-.+.++.+.+.-=..+-|=.|+-..+.++=.++.+.+++.|..
T Consensus 21 ~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~-~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gad 98 (291)
T 3a5f_A 21 FDKLSELIEWHIKSKTDAIIVCGTTGEATTMTE-TERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVD 98 (291)
T ss_dssp HHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCH-HHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEECccccChhhCCH-HHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCC
Confidence 3446666666666666 222 254444432211 112222222222100112233444455555556666666666654
Done!