Query 028957
Match_columns 201
No_of_seqs 184 out of 2494
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 08:05:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028957.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028957hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pxx_A Uncharacterized protein 99.9 1.2E-22 3.9E-27 154.7 14.0 160 1-162 43-202 (215)
2 4gek_A TRNA (CMO5U34)-methyltr 99.8 5.7E-19 2E-23 139.1 13.3 107 1-122 71-181 (261)
3 1pjz_A Thiopurine S-methyltran 99.8 1.8E-19 6E-24 136.9 8.8 105 1-119 23-140 (203)
4 1vl5_A Unknown conserved prote 99.8 6.2E-19 2.1E-23 138.3 11.6 105 1-121 38-142 (260)
5 4hg2_A Methyltransferase type 99.8 3.5E-19 1.2E-23 140.1 8.2 99 2-123 41-139 (257)
6 1xxl_A YCGJ protein; structura 99.8 2.4E-18 8.2E-23 133.5 11.9 106 1-122 22-127 (239)
7 2gb4_A Thiopurine S-methyltran 99.8 1.4E-18 4.9E-23 136.2 10.1 106 1-120 69-192 (252)
8 3jwh_A HEN1; methyltransferase 99.8 1.3E-17 4.4E-22 127.4 13.5 106 1-119 30-141 (217)
9 2xvm_A Tellurite resistance pr 99.8 9.7E-18 3.3E-22 125.9 12.6 105 1-120 33-137 (199)
10 3dh0_A SAM dependent methyltra 99.8 5.3E-18 1.8E-22 129.5 11.0 107 1-122 38-146 (219)
11 3g5l_A Putative S-adenosylmeth 99.7 7E-18 2.4E-22 131.7 11.2 103 1-121 45-147 (253)
12 3f4k_A Putative methyltransfer 99.7 1.1E-17 3.7E-22 130.7 12.1 104 1-120 47-151 (257)
13 3jwg_A HEN1, methyltransferase 99.7 2.1E-17 7.1E-22 126.3 13.2 106 1-119 30-141 (219)
14 3dtn_A Putative methyltransfer 99.7 1.3E-17 4.5E-22 128.6 12.0 107 1-123 45-152 (234)
15 3h2b_A SAM-dependent methyltra 99.7 6.9E-18 2.4E-22 127.5 9.9 104 1-123 42-145 (203)
16 4htf_A S-adenosylmethionine-de 99.7 9.3E-18 3.2E-22 133.3 11.2 105 1-121 69-175 (285)
17 2ex4_A Adrenal gland protein A 99.7 9.4E-18 3.2E-22 130.2 10.9 108 1-121 80-187 (241)
18 3kkz_A Uncharacterized protein 99.7 1.9E-17 6.5E-22 130.4 12.6 105 1-121 47-152 (267)
19 3mgg_A Methyltransferase; NYSG 99.7 1.4E-17 4.7E-22 131.6 11.4 105 1-120 38-143 (276)
20 1nkv_A Hypothetical protein YJ 99.7 1.1E-17 3.9E-22 130.6 10.8 104 1-120 37-141 (256)
21 3ujc_A Phosphoethanolamine N-m 99.7 1E-17 3.5E-22 131.2 10.5 106 1-122 56-162 (266)
22 1ve3_A Hypothetical protein PH 99.7 3.2E-17 1.1E-21 125.6 13.0 108 1-123 39-146 (227)
23 3ofk_A Nodulation protein S; N 99.7 1.1E-17 3.7E-22 127.6 10.3 104 2-121 53-156 (216)
24 2p7i_A Hypothetical protein; p 99.7 9.7E-18 3.3E-22 129.9 10.2 102 1-123 43-145 (250)
25 3m70_A Tellurite resistance pr 99.7 3.6E-17 1.2E-21 130.0 13.0 104 1-120 121-224 (286)
26 3sm3_A SAM-dependent methyltra 99.7 3.8E-17 1.3E-21 125.6 12.5 109 1-122 31-144 (235)
27 3ou2_A SAM-dependent methyltra 99.7 3E-17 1E-21 124.9 11.8 104 1-123 47-150 (218)
28 1xtp_A LMAJ004091AAA; SGPP, st 99.7 1.9E-17 6.5E-22 129.1 10.8 105 1-120 94-198 (254)
29 2o57_A Putative sarcosine dime 99.7 2.3E-17 8E-22 131.7 11.6 105 1-121 83-189 (297)
30 2p8j_A S-adenosylmethionine-de 99.7 3.3E-17 1.1E-21 124.1 11.8 109 1-124 24-133 (209)
31 3p9n_A Possible methyltransfer 99.7 4.7E-17 1.6E-21 121.8 12.4 108 1-122 45-156 (189)
32 3bus_A REBM, methyltransferase 99.7 2.7E-17 9.4E-22 129.6 11.6 106 1-121 62-168 (273)
33 3dlc_A Putative S-adenosyl-L-m 99.7 3E-17 1E-21 124.8 11.3 103 3-120 46-149 (219)
34 3hnr_A Probable methyltransfer 99.7 3E-17 1E-21 125.4 11.3 102 1-121 46-147 (220)
35 2yqz_A Hypothetical protein TT 99.7 3.2E-17 1.1E-21 128.3 11.7 101 1-118 40-140 (263)
36 2vdw_A Vaccinia virus capping 99.7 1.5E-17 5.3E-22 133.6 10.0 111 1-123 49-173 (302)
37 1ri5_A MRNA capping enzyme; me 99.7 5.3E-17 1.8E-21 129.3 12.8 111 1-122 65-177 (298)
38 3vc1_A Geranyl diphosphate 2-C 99.7 4.2E-17 1.4E-21 131.4 12.2 104 1-121 118-223 (312)
39 1yzh_A TRNA (guanine-N(7)-)-me 99.7 8.7E-17 3E-21 122.7 13.2 112 1-121 42-158 (214)
40 3l8d_A Methyltransferase; stru 99.7 3E-17 1E-21 127.0 10.5 103 1-122 54-156 (242)
41 3mti_A RRNA methylase; SAM-dep 99.7 7.3E-17 2.5E-21 120.2 11.9 113 1-121 23-137 (185)
42 3hem_A Cyclopropane-fatty-acyl 99.7 1.2E-16 3.9E-21 128.1 13.5 113 1-123 73-187 (302)
43 3i9f_A Putative type 11 methyl 99.7 7.5E-17 2.6E-21 118.5 11.3 99 1-123 18-116 (170)
44 2fca_A TRNA (guanine-N(7)-)-me 99.7 7.1E-17 2.4E-21 123.4 11.2 112 1-121 39-155 (213)
45 3pfg_A N-methyltransferase; N, 99.7 6.6E-17 2.2E-21 126.9 11.2 103 1-122 51-154 (263)
46 3lcc_A Putative methyl chlorid 99.7 3.6E-17 1.2E-21 126.3 9.4 106 2-122 68-174 (235)
47 3e23_A Uncharacterized protein 99.7 8.1E-17 2.8E-21 122.4 11.0 101 1-122 44-144 (211)
48 3bkw_A MLL3908 protein, S-aden 99.7 6.6E-17 2.3E-21 125.1 10.5 103 1-121 44-146 (243)
49 1y8c_A S-adenosylmethionine-de 99.7 1.1E-16 3.7E-21 123.8 11.6 106 1-121 38-144 (246)
50 2ift_A Putative methylase HI07 99.7 2.8E-16 9.5E-21 119.0 13.6 107 1-123 54-167 (201)
51 3g5t_A Trans-aconitate 3-methy 99.7 8.5E-17 2.9E-21 128.7 11.0 105 1-121 37-151 (299)
52 1zx0_A Guanidinoacetate N-meth 99.7 3.2E-17 1.1E-21 126.9 8.2 109 1-121 61-172 (236)
53 3g2m_A PCZA361.24; SAM-depende 99.7 1E-16 3.5E-21 128.2 11.2 109 2-125 84-196 (299)
54 3ocj_A Putative exported prote 99.7 1.1E-16 3.9E-21 128.4 11.2 110 1-123 119-231 (305)
55 2a14_A Indolethylamine N-methy 99.7 3.1E-17 1.1E-21 129.2 7.7 109 1-120 56-198 (263)
56 3dli_A Methyltransferase; PSI- 99.7 5.2E-17 1.8E-21 125.9 8.7 101 1-123 42-144 (240)
57 3g07_A 7SK snRNA methylphospha 99.7 9.8E-17 3.3E-21 128.2 10.4 110 1-119 47-220 (292)
58 3gu3_A Methyltransferase; alph 99.7 1.6E-16 5.6E-21 126.3 11.6 104 1-121 23-128 (284)
59 2kw5_A SLR1183 protein; struct 99.7 3E-16 1E-20 118.3 12.4 104 3-123 32-135 (202)
60 3e05_A Precorrin-6Y C5,15-meth 99.7 4.1E-16 1.4E-20 117.9 13.1 103 1-121 41-144 (204)
61 3dxy_A TRNA (guanine-N(7)-)-me 99.7 7.9E-17 2.7E-21 123.6 9.2 112 1-121 35-152 (218)
62 2p35_A Trans-aconitate 2-methy 99.7 1.9E-16 6.4E-21 123.7 11.2 100 1-121 34-134 (259)
63 2gs9_A Hypothetical protein TT 99.7 1E-16 3.5E-21 121.7 9.4 100 1-123 37-136 (211)
64 3thr_A Glycine N-methyltransfe 99.7 5.1E-17 1.7E-21 129.4 8.0 112 1-121 58-177 (293)
65 3bgv_A MRNA CAP guanine-N7 met 99.7 3.5E-16 1.2E-20 126.0 12.8 112 1-123 35-159 (313)
66 3ege_A Putative methyltransfer 99.7 5.1E-17 1.7E-21 127.7 7.7 101 1-124 35-135 (261)
67 3ccf_A Cyclopropane-fatty-acyl 99.7 1.6E-16 5.6E-21 125.8 10.5 100 1-122 58-157 (279)
68 1kpg_A CFA synthase;, cyclopro 99.7 2.3E-16 8E-21 125.3 11.4 105 1-122 65-171 (287)
69 2fk8_A Methoxy mycolic acid sy 99.7 4.8E-16 1.6E-20 125.3 13.0 107 1-124 91-199 (318)
70 3fpf_A Mtnas, putative unchara 99.7 3.8E-16 1.3E-20 124.3 11.7 100 1-120 123-223 (298)
71 3grz_A L11 mtase, ribosomal pr 99.7 3E-16 1E-20 118.7 10.2 102 1-122 61-162 (205)
72 3ckk_A TRNA (guanine-N(7)-)-me 99.7 3.2E-16 1.1E-20 121.6 10.4 111 2-121 48-170 (235)
73 3d2l_A SAM-dependent methyltra 99.7 7.7E-16 2.6E-20 119.0 12.4 105 1-121 34-139 (243)
74 1dus_A MJ0882; hypothetical pr 99.7 9.3E-16 3.2E-20 114.2 12.5 107 1-123 53-161 (194)
75 1wzn_A SAM-dependent methyltra 99.7 9.6E-16 3.3E-20 119.4 12.9 104 1-120 42-146 (252)
76 3ggd_A SAM-dependent methyltra 99.7 1.7E-16 6E-21 123.2 8.5 106 1-123 57-167 (245)
77 4fsd_A Arsenic methyltransfera 99.7 3.1E-16 1.1E-20 129.8 10.5 105 1-120 84-204 (383)
78 3dp7_A SAM-dependent methyltra 99.7 1.3E-15 4.3E-20 125.3 13.9 107 1-122 180-290 (363)
79 3bxo_A N,N-dimethyltransferase 99.7 5.7E-16 1.9E-20 119.5 11.0 104 1-123 41-145 (239)
80 3njr_A Precorrin-6Y methylase; 99.7 1.6E-15 5.6E-20 115.1 13.2 101 1-122 56-157 (204)
81 3q7e_A Protein arginine N-meth 99.7 5.2E-16 1.8E-20 127.0 11.1 103 1-116 67-170 (349)
82 3orh_A Guanidinoacetate N-meth 99.7 1.7E-16 5.9E-21 123.1 7.9 108 1-119 61-170 (236)
83 3eey_A Putative rRNA methylase 99.7 8.9E-16 3E-20 115.4 11.3 115 1-121 23-141 (197)
84 2fpo_A Methylase YHHF; structu 99.7 1.6E-15 5.4E-20 114.9 12.7 105 1-121 55-162 (202)
85 3cgg_A SAM-dependent methyltra 99.7 1.5E-15 5E-20 113.2 12.3 104 1-123 47-151 (195)
86 3evz_A Methyltransferase; NYSG 99.7 2.1E-15 7.2E-20 116.0 13.5 122 1-123 56-183 (230)
87 3tma_A Methyltransferase; thum 99.7 1E-15 3.5E-20 125.4 12.3 115 1-122 204-320 (354)
88 1xdz_A Methyltransferase GIDB; 99.7 5E-16 1.7E-20 120.6 10.0 100 1-119 71-174 (240)
89 2fyt_A Protein arginine N-meth 99.7 8.5E-16 2.9E-20 125.3 11.7 103 1-116 65-168 (340)
90 1jsx_A Glucose-inhibited divis 99.6 3.9E-15 1.3E-19 112.6 14.5 100 1-120 66-166 (207)
91 2esr_A Methyltransferase; stru 99.6 2.5E-15 8.7E-20 111.0 12.9 108 1-124 32-143 (177)
92 3dmg_A Probable ribosomal RNA 99.6 1.6E-15 5.3E-20 125.5 12.6 110 1-122 234-343 (381)
93 2i62_A Nicotinamide N-methyltr 99.6 4.9E-16 1.7E-20 121.6 9.2 109 2-121 58-200 (265)
94 3lbf_A Protein-L-isoaspartate 99.6 1.7E-15 5.9E-20 114.9 11.5 99 1-121 78-176 (210)
95 3i53_A O-methyltransferase; CO 99.6 3.3E-15 1.1E-19 121.2 13.7 106 2-123 171-278 (332)
96 3iv6_A Putative Zn-dependent a 99.6 1.2E-15 4.1E-20 119.9 10.4 99 1-120 46-149 (261)
97 3g89_A Ribosomal RNA small sub 99.6 1.2E-15 4E-20 119.4 9.9 101 1-120 81-185 (249)
98 3lec_A NADB-rossmann superfami 99.6 1E-14 3.5E-19 112.2 14.4 141 1-158 22-164 (230)
99 3hm2_A Precorrin-6Y C5,15-meth 99.6 2.7E-15 9.2E-20 110.6 10.8 103 1-123 26-131 (178)
100 2fhp_A Methylase, putative; al 99.6 3.6E-15 1.2E-19 110.8 11.4 108 1-124 45-159 (187)
101 2avn_A Ubiquinone/menaquinone 99.6 1.6E-15 5.6E-20 118.9 9.8 101 1-122 55-155 (260)
102 3e8s_A Putative SAM dependent 99.6 9.4E-16 3.2E-20 117.1 8.2 101 1-124 53-157 (227)
103 3r0q_C Probable protein argini 99.6 1.7E-15 5.9E-20 125.1 10.4 104 1-118 64-168 (376)
104 2g72_A Phenylethanolamine N-me 99.6 1.5E-15 5E-20 120.9 9.6 108 1-119 72-215 (289)
105 2aot_A HMT, histamine N-methyl 99.6 8E-16 2.7E-20 122.8 8.0 106 2-122 54-175 (292)
106 3fzg_A 16S rRNA methylase; met 99.6 9.8E-16 3.4E-20 114.0 7.7 133 1-151 50-194 (200)
107 2r3s_A Uncharacterized protein 99.6 4.6E-15 1.6E-19 120.3 12.2 108 1-123 166-275 (335)
108 3bkx_A SAM-dependent methyltra 99.6 1.9E-15 6.6E-20 119.1 9.7 108 1-123 44-163 (275)
109 2vdv_E TRNA (guanine-N(7)-)-me 99.6 1.8E-15 6.2E-20 117.9 9.3 109 2-119 51-173 (246)
110 3htx_A HEN1; HEN1, small RNA m 99.6 6.1E-15 2.1E-19 130.2 13.5 107 1-121 722-836 (950)
111 3lpm_A Putative methyltransfer 99.6 5E-15 1.7E-19 116.2 11.7 120 1-120 50-177 (259)
112 3gnl_A Uncharacterized protein 99.6 1.2E-14 4.1E-19 112.8 13.5 141 1-158 22-164 (244)
113 3kr9_A SAM-dependent methyltra 99.6 1.8E-14 6.2E-19 110.6 14.2 141 1-159 16-159 (225)
114 1g6q_1 HnRNP arginine N-methyl 99.6 3.6E-15 1.2E-19 121.0 11.0 103 1-116 39-142 (328)
115 3gwz_A MMCR; methyltransferase 99.6 1.1E-14 3.7E-19 120.0 13.9 107 1-123 203-311 (369)
116 1x19_A CRTF-related protein; m 99.6 9.7E-15 3.3E-19 119.7 13.5 107 1-123 191-299 (359)
117 2qe6_A Uncharacterized protein 99.6 6.1E-15 2.1E-19 116.8 11.7 106 2-122 79-199 (274)
118 2frn_A Hypothetical protein PH 99.6 1.7E-15 5.9E-20 120.2 8.4 102 1-122 126-228 (278)
119 3cc8_A Putative methyltransfer 99.6 4.3E-15 1.5E-19 113.6 10.1 99 1-122 33-133 (230)
120 1vlm_A SAM-dependent methyltra 99.6 3.6E-15 1.2E-19 114.0 9.6 95 1-122 48-142 (219)
121 1qzz_A RDMB, aclacinomycin-10- 99.6 9.7E-15 3.3E-19 120.2 12.8 104 1-120 183-288 (374)
122 1nt2_A Fibrillarin-like PRE-rR 99.6 7.9E-15 2.7E-19 111.8 11.2 99 1-119 58-161 (210)
123 1l3i_A Precorrin-6Y methyltran 99.6 5.3E-15 1.8E-19 109.9 9.8 102 1-122 34-137 (192)
124 4dcm_A Ribosomal RNA large sub 99.6 7.7E-15 2.6E-19 121.1 11.6 111 2-123 224-338 (375)
125 3gdh_A Trimethylguanosine synt 99.6 1.7E-16 5.9E-21 123.0 1.2 101 1-118 79-180 (241)
126 3mcz_A O-methyltransferase; ad 99.6 9.3E-15 3.2E-19 119.4 11.6 108 1-122 180-290 (352)
127 2y1w_A Histone-arginine methyl 99.6 1E-14 3.4E-19 119.4 11.3 102 1-117 51-153 (348)
128 4df3_A Fibrillarin-like rRNA/T 99.6 1.6E-14 5.4E-19 111.5 11.8 100 1-119 78-182 (233)
129 3ntv_A MW1564 protein; rossman 99.6 7.7E-15 2.6E-19 113.4 10.0 100 1-118 72-175 (232)
130 3uwp_A Histone-lysine N-methyl 99.6 5.2E-15 1.8E-19 122.2 9.2 107 1-123 174-292 (438)
131 1vbf_A 231AA long hypothetical 99.6 2.4E-14 8.3E-19 110.0 12.1 98 1-122 71-168 (231)
132 1dl5_A Protein-L-isoaspartate 99.6 1.2E-14 4E-19 117.5 10.7 99 1-120 76-176 (317)
133 1ws6_A Methyltransferase; stru 99.6 6.2E-15 2.1E-19 107.9 8.3 105 1-124 42-152 (171)
134 1tw3_A COMT, carminomycin 4-O- 99.6 2.2E-14 7.5E-19 117.5 12.4 105 1-121 184-290 (360)
135 3tfw_A Putative O-methyltransf 99.6 2.5E-14 8.7E-19 111.6 12.0 102 1-120 64-171 (248)
136 2ozv_A Hypothetical protein AT 99.6 1.5E-14 5.3E-19 113.7 10.7 119 1-120 37-171 (260)
137 2nxc_A L11 mtase, ribosomal pr 99.6 4.7E-15 1.6E-19 116.2 7.7 100 1-121 121-220 (254)
138 2ip2_A Probable phenazine-spec 99.6 1.4E-14 4.9E-19 117.4 10.7 105 2-122 169-275 (334)
139 1af7_A Chemotaxis receptor met 99.6 1.3E-14 4.4E-19 114.9 10.1 104 2-118 107-251 (274)
140 3mq2_A 16S rRNA methyltransfer 99.6 2.3E-15 7.9E-20 114.9 5.5 108 1-119 28-140 (218)
141 4hc4_A Protein arginine N-meth 99.6 1.3E-14 4.4E-19 119.5 10.3 102 1-116 84-186 (376)
142 2pjd_A Ribosomal RNA small sub 99.6 1E-14 3.5E-19 119.0 9.6 109 1-122 197-306 (343)
143 1o9g_A RRNA methyltransferase; 99.6 1.8E-14 6.3E-19 112.3 10.5 114 2-121 53-216 (250)
144 2yxe_A Protein-L-isoaspartate 99.6 2.7E-14 9.1E-19 108.7 11.2 101 1-122 78-180 (215)
145 3u81_A Catechol O-methyltransf 99.6 2.6E-14 9E-19 109.4 11.1 106 1-122 59-173 (221)
146 4dzr_A Protein-(glutamine-N5) 99.6 1.3E-15 4.4E-20 115.4 3.7 118 1-120 31-165 (215)
147 1fbn_A MJ fibrillarin homologu 99.6 2.6E-14 9E-19 110.1 11.1 98 1-118 75-177 (230)
148 2yxd_A Probable cobalt-precorr 99.6 2.9E-14 1E-18 105.2 10.9 100 1-123 36-135 (183)
149 2pwy_A TRNA (adenine-N(1)-)-me 99.6 1.7E-14 5.9E-19 112.5 9.7 102 1-122 97-201 (258)
150 3m33_A Uncharacterized protein 99.5 1E-14 3.5E-19 112.1 8.2 89 1-116 49-139 (226)
151 3dr5_A Putative O-methyltransf 99.5 1E-14 3.5E-19 112.1 7.9 99 2-118 58-162 (221)
152 3mb5_A SAM-dependent methyltra 99.5 1.6E-14 5.3E-19 112.8 8.6 100 1-121 94-196 (255)
153 1yb2_A Hypothetical protein TA 99.5 1.5E-14 5.3E-19 114.4 8.6 101 1-122 111-214 (275)
154 1ixk_A Methyltransferase; open 99.5 2.5E-14 8.6E-19 115.5 9.8 122 1-122 119-249 (315)
155 2b3t_A Protein methyltransfera 99.5 3.7E-14 1.3E-18 112.2 10.6 118 1-119 110-238 (276)
156 3bzb_A Uncharacterized protein 99.5 6.8E-14 2.3E-18 111.1 12.0 103 1-118 80-204 (281)
157 4azs_A Methyltransferase WBDD; 99.5 1.7E-14 5.7E-19 125.1 9.1 106 1-120 67-174 (569)
158 3b3j_A Histone-arginine methyl 99.5 3.5E-14 1.2E-18 120.6 10.4 102 1-117 159-261 (480)
159 3a27_A TYW2, uncharacterized p 99.5 2.7E-14 9.4E-19 113.0 9.2 102 1-122 120-222 (272)
160 1jg1_A PIMT;, protein-L-isoasp 99.5 7E-14 2.4E-18 108.0 11.1 100 1-122 92-192 (235)
161 2pbf_A Protein-L-isoaspartate 99.5 5E-14 1.7E-18 108.1 10.1 100 1-121 81-195 (227)
162 3duw_A OMT, O-methyltransferas 99.5 5.8E-14 2E-18 107.4 10.3 102 1-120 59-168 (223)
163 2igt_A SAM dependent methyltra 99.5 3.7E-14 1.3E-18 115.2 9.7 117 1-123 154-276 (332)
164 1u2z_A Histone-lysine N-methyl 99.5 6.2E-14 2.1E-18 117.2 11.2 103 1-119 243-359 (433)
165 3q87_B N6 adenine specific DNA 99.5 1.3E-14 4.5E-19 106.9 6.3 100 1-121 24-125 (170)
166 4a6d_A Hydroxyindole O-methylt 99.5 1.8E-13 6.3E-18 112.0 13.4 104 2-121 181-285 (353)
167 3p2e_A 16S rRNA methylase; met 99.5 1.2E-14 4.2E-19 111.9 5.9 108 1-119 25-139 (225)
168 4e2x_A TCAB9; kijanose, tetron 99.5 2.6E-15 8.9E-20 125.4 2.2 101 1-121 108-210 (416)
169 3tr6_A O-methyltransferase; ce 99.5 3.7E-14 1.3E-18 108.6 8.4 102 1-120 65-175 (225)
170 2b78_A Hypothetical protein SM 99.5 5.5E-14 1.9E-18 116.5 9.9 117 1-123 213-335 (385)
171 3ajd_A Putative methyltransfer 99.5 4.8E-14 1.6E-18 111.6 9.1 122 1-122 84-214 (274)
172 2gpy_A O-methyltransferase; st 99.5 4.5E-14 1.6E-18 108.8 8.8 101 1-119 55-160 (233)
173 1i1n_A Protein-L-isoaspartate 99.5 9.1E-14 3.1E-18 106.5 10.4 100 1-121 78-184 (226)
174 3tm4_A TRNA (guanine N2-)-meth 99.5 2.6E-13 8.8E-18 112.0 13.8 113 1-122 218-332 (373)
175 3reo_A (ISO)eugenol O-methyltr 99.5 5.7E-14 2E-18 115.7 9.8 99 2-123 205-304 (368)
176 3lst_A CALO1 methyltransferase 99.5 4.9E-14 1.7E-18 115.1 9.3 103 2-123 186-290 (348)
177 1p91_A Ribosomal RNA large sub 99.5 9.2E-14 3.1E-18 109.2 10.3 97 1-124 86-183 (269)
178 2ipx_A RRNA 2'-O-methyltransfe 99.5 1E-13 3.6E-18 106.9 10.2 101 1-120 78-183 (233)
179 1i9g_A Hypothetical protein RV 99.5 4.9E-14 1.7E-18 111.4 8.6 102 1-122 100-206 (280)
180 2qm3_A Predicted methyltransfe 99.5 2.4E-13 8.3E-18 112.1 12.7 102 1-119 173-278 (373)
181 3c3p_A Methyltransferase; NP_9 99.5 7.4E-14 2.5E-18 106.0 8.8 100 1-119 57-160 (210)
182 3p9c_A Caffeic acid O-methyltr 99.5 7.3E-14 2.5E-18 114.9 9.3 99 2-123 203-302 (364)
183 3adn_A Spermidine synthase; am 99.5 9.9E-14 3.4E-18 110.9 9.3 106 1-119 84-198 (294)
184 1o54_A SAM-dependent O-methylt 99.5 7.8E-14 2.7E-18 110.4 8.6 100 1-121 113-215 (277)
185 2as0_A Hypothetical protein PH 99.5 1.5E-13 5.1E-18 114.2 10.5 111 1-122 218-338 (396)
186 2yvl_A TRMI protein, hypotheti 99.5 1.8E-13 6.2E-18 106.1 10.3 101 1-122 92-193 (248)
187 3r3h_A O-methyltransferase, SA 99.5 1.5E-14 5.1E-19 112.6 3.8 102 1-120 61-171 (242)
188 1g8a_A Fibrillarin-like PRE-rR 99.5 3.6E-13 1.2E-17 103.3 11.3 99 1-118 74-177 (227)
189 3v97_A Ribosomal RNA large sub 99.5 1.5E-13 5E-18 121.7 10.1 117 1-121 540-659 (703)
190 1fp1_D Isoliquiritigenin 2'-O- 99.5 8.4E-14 2.9E-18 114.7 7.9 98 1-121 210-308 (372)
191 1ej0_A FTSJ; methyltransferase 99.5 4.1E-14 1.4E-18 103.6 5.3 103 1-124 23-141 (180)
192 3bwc_A Spermidine synthase; SA 99.5 1.5E-13 5.2E-18 110.4 8.9 108 1-121 96-212 (304)
193 2b25_A Hypothetical protein; s 99.5 2.1E-13 7.2E-18 110.8 9.8 102 1-122 106-222 (336)
194 3c0k_A UPF0064 protein YCCW; P 99.5 1.7E-13 5.8E-18 113.9 9.5 116 1-122 221-342 (396)
195 2zfu_A Nucleomethylin, cerebra 99.5 7.8E-14 2.7E-18 106.0 6.9 87 1-122 68-154 (215)
196 3id6_C Fibrillarin-like rRNA/T 99.5 6.3E-13 2.1E-17 102.6 11.8 100 1-119 77-181 (232)
197 2hnk_A SAM-dependent O-methylt 99.5 1.4E-13 4.9E-18 106.5 8.1 101 1-119 61-181 (239)
198 2plw_A Ribosomal RNA methyltra 99.5 2.6E-13 8.9E-18 102.0 9.1 108 1-123 23-158 (201)
199 1sui_A Caffeoyl-COA O-methyltr 99.5 1.5E-13 5E-18 107.3 7.9 101 1-119 80-190 (247)
200 1fp2_A Isoflavone O-methyltran 99.5 2E-13 6.7E-18 111.7 9.0 98 1-121 189-290 (352)
201 1r18_A Protein-L-isoaspartate( 99.4 1.4E-13 4.8E-18 105.7 7.3 99 1-121 85-196 (227)
202 2yxl_A PH0851 protein, 450AA l 99.4 3.3E-13 1.1E-17 113.9 10.2 122 1-122 260-392 (450)
203 1wy7_A Hypothetical protein PH 99.4 9.4E-13 3.2E-17 99.5 11.7 97 1-116 50-146 (207)
204 3gjy_A Spermidine synthase; AP 99.4 2.1E-13 7.1E-18 109.7 8.4 109 2-121 91-202 (317)
205 1ne2_A Hypothetical protein TA 99.4 6.9E-13 2.4E-17 99.8 10.7 88 1-109 52-139 (200)
206 3hp7_A Hemolysin, putative; st 99.4 6.4E-14 2.2E-18 111.5 5.1 95 1-118 86-184 (291)
207 3giw_A Protein of unknown func 99.4 3.2E-13 1.1E-17 106.3 8.6 110 2-123 80-204 (277)
208 1uir_A Polyamine aminopropyltr 99.4 2.6E-13 8.9E-18 109.5 8.4 110 1-119 78-195 (314)
209 2h00_A Methyltransferase 10 do 99.4 9E-14 3.1E-18 108.5 5.4 78 1-78 66-151 (254)
210 3cbg_A O-methyltransferase; cy 99.4 7.3E-13 2.5E-17 102.2 10.4 102 1-120 73-183 (232)
211 4dmg_A Putative uncharacterize 99.4 4.8E-13 1.6E-17 110.9 9.9 110 1-123 215-330 (393)
212 2avd_A Catechol-O-methyltransf 99.4 2.7E-13 9.3E-18 104.0 7.6 101 1-119 70-179 (229)
213 2frx_A Hypothetical protein YE 99.4 4.9E-13 1.7E-17 113.5 9.9 121 1-121 118-248 (479)
214 3dou_A Ribosomal RNA large sub 99.4 8.3E-14 2.8E-18 104.6 4.6 108 1-124 26-144 (191)
215 1wxx_A TT1595, hypothetical pr 99.4 1.7E-13 5.7E-18 113.4 6.8 111 1-122 210-328 (382)
216 1xj5_A Spermidine synthase 1; 99.4 3.7E-13 1.3E-17 109.4 8.6 107 1-118 121-234 (334)
217 3k6r_A Putative transferase PH 99.4 6.2E-13 2.1E-17 105.2 9.6 100 1-120 126-226 (278)
218 2i7c_A Spermidine synthase; tr 99.4 3.6E-13 1.2E-17 107.1 8.2 107 1-120 79-193 (283)
219 1inl_A Spermidine synthase; be 99.4 5.3E-13 1.8E-17 106.8 9.1 111 1-121 91-207 (296)
220 1mjf_A Spermidine synthase; sp 99.4 3.1E-13 1.1E-17 107.4 7.6 104 1-119 76-193 (281)
221 3c3y_A Pfomt, O-methyltransfer 99.4 6.7E-13 2.3E-17 102.8 9.3 101 1-119 71-181 (237)
222 2yx1_A Hypothetical protein MJ 99.4 5.7E-13 2E-17 108.4 8.8 99 1-123 196-295 (336)
223 1iy9_A Spermidine synthase; ro 99.4 4.5E-13 1.6E-17 106.1 8.0 109 1-120 76-190 (275)
224 2o07_A Spermidine synthase; st 99.4 4.3E-13 1.5E-17 107.7 7.9 109 1-120 96-210 (304)
225 3m6w_A RRNA methylase; rRNA me 99.4 3.9E-13 1.3E-17 113.4 7.7 120 1-121 102-231 (464)
226 2bm8_A Cephalosporin hydroxyla 99.4 2.4E-13 8.2E-18 105.4 5.7 96 1-119 82-187 (236)
227 1nv8_A HEMK protein; class I a 99.4 4.7E-12 1.6E-16 100.7 13.2 114 1-119 124-249 (284)
228 1zg3_A Isoflavanone 4'-O-methy 99.4 7.6E-13 2.6E-17 108.4 8.8 97 2-121 195-295 (358)
229 2pt6_A Spermidine synthase; tr 99.4 6.9E-13 2.4E-17 107.3 8.3 108 1-121 117-232 (321)
230 1zq9_A Probable dimethyladenos 99.4 1.2E-12 4E-17 104.3 9.1 75 1-78 29-104 (285)
231 2b2c_A Spermidine synthase; be 99.4 4.4E-13 1.5E-17 108.0 6.7 106 1-119 109-222 (314)
232 1sqg_A SUN protein, FMU protei 99.4 9.7E-13 3.3E-17 110.4 8.5 121 1-122 247-377 (429)
233 3sso_A Methyltransferase; macr 99.4 3.3E-13 1.1E-17 111.1 5.1 96 1-121 217-326 (419)
234 2nyu_A Putative ribosomal RNA 99.4 1.3E-12 4.3E-17 97.8 7.6 108 1-124 23-150 (196)
235 3frh_A 16S rRNA methylase; met 99.4 1.8E-11 6.2E-16 94.2 13.5 133 1-151 106-248 (253)
236 3m4x_A NOL1/NOP2/SUN family pr 99.4 7.7E-13 2.6E-17 111.4 6.4 122 1-122 106-237 (456)
237 3lcv_B Sisomicin-gentamicin re 99.3 3.8E-12 1.3E-16 98.9 8.3 135 1-151 133-278 (281)
238 2h1r_A Dimethyladenosine trans 99.3 9.9E-12 3.4E-16 99.5 10.8 75 1-78 43-117 (299)
239 2cmg_A Spermidine synthase; tr 99.3 1.5E-12 5.1E-17 102.4 5.1 96 1-120 73-172 (262)
240 2f8l_A Hypothetical protein LM 99.3 6.3E-12 2.2E-16 102.5 9.0 117 2-120 132-257 (344)
241 1uwv_A 23S rRNA (uracil-5-)-me 99.3 3E-11 1E-15 101.4 12.3 73 1-74 287-363 (433)
242 2b9e_A NOL1/NOP2/SUN domain fa 99.3 8.7E-11 3E-15 94.4 14.4 121 1-122 103-237 (309)
243 3ldg_A Putative uncharacterize 99.3 4.8E-11 1.6E-15 98.6 13.2 110 1-122 195-346 (384)
244 3opn_A Putative hemolysin; str 99.3 2.2E-12 7.5E-17 99.7 4.9 96 1-118 38-136 (232)
245 2wa2_A Non-structural protein 99.3 1.1E-12 3.6E-17 104.0 3.1 105 1-121 83-195 (276)
246 3ldu_A Putative methylase; str 99.3 3.1E-11 1.1E-15 99.8 12.0 110 1-122 196-347 (385)
247 3k0b_A Predicted N6-adenine-sp 99.3 3.2E-11 1.1E-15 100.0 11.8 110 1-122 202-353 (393)
248 2p41_A Type II methyltransfera 99.3 2.7E-12 9.3E-17 103.1 5.0 107 1-122 83-194 (305)
249 2oxt_A Nucleoside-2'-O-methylt 99.3 2.6E-12 8.8E-17 101.2 4.8 105 1-121 75-187 (265)
250 2jjq_A Uncharacterized RNA met 99.3 3.4E-11 1.2E-15 100.8 11.7 97 1-119 291-387 (425)
251 2qfm_A Spermine synthase; sper 99.3 1.6E-11 5.4E-16 100.0 8.6 112 1-121 189-316 (364)
252 2ld4_A Anamorsin; methyltransf 99.2 1.8E-12 6.2E-17 95.6 2.5 86 1-119 13-101 (176)
253 3gru_A Dimethyladenosine trans 99.2 5.4E-11 1.9E-15 94.9 9.6 75 1-78 51-125 (295)
254 3bt7_A TRNA (uracil-5-)-methyl 99.2 2.5E-11 8.5E-16 99.9 7.3 102 1-124 214-331 (369)
255 2dul_A N(2),N(2)-dimethylguano 99.2 3.3E-11 1.1E-15 99.5 6.3 100 1-119 48-164 (378)
256 3axs_A Probable N(2),N(2)-dime 99.1 7.8E-11 2.7E-15 97.4 7.9 100 1-119 53-158 (392)
257 2okc_A Type I restriction enzy 99.1 9.3E-11 3.2E-15 98.8 7.7 118 1-120 172-308 (445)
258 3tqs_A Ribosomal RNA small sub 99.1 7.1E-10 2.4E-14 86.7 11.2 72 1-76 30-105 (255)
259 3ll7_A Putative methyltransfer 99.1 1.6E-10 5.5E-15 95.9 7.9 73 1-74 94-170 (410)
260 2ih2_A Modification methylase 99.1 1.2E-10 4.2E-15 97.0 7.2 109 1-121 40-166 (421)
261 2xyq_A Putative 2'-O-methyl tr 99.1 2E-10 6.7E-15 91.4 8.0 103 1-124 64-176 (290)
262 1qam_A ERMC' methyltransferase 99.1 8.7E-10 3E-14 85.7 11.3 72 1-76 31-103 (244)
263 1yub_A Ermam, rRNA methyltrans 99.1 9.3E-12 3.2E-16 96.8 -1.1 101 1-119 30-145 (245)
264 3v97_A Ribosomal RNA large sub 99.0 1.7E-09 5.7E-14 95.8 12.2 110 1-121 191-349 (703)
265 3fut_A Dimethyladenosine trans 99.0 5.7E-10 2E-14 88.0 7.1 72 3-78 49-121 (271)
266 2r6z_A UPF0341 protein in RSP 99.0 1.8E-10 6E-15 90.4 2.8 76 1-77 84-171 (258)
267 3o4f_A Spermidine synthase; am 99.0 7.6E-09 2.6E-13 82.1 11.9 108 1-119 84-198 (294)
268 2ar0_A M.ecoki, type I restric 98.9 2E-09 6.8E-14 92.7 8.1 119 1-120 170-313 (541)
269 3lkd_A Type I restriction-modi 98.9 1.4E-08 4.8E-13 87.3 12.1 121 1-122 222-361 (542)
270 4fzv_A Putative methyltransfer 98.9 7.5E-09 2.6E-13 84.6 9.8 120 1-122 149-287 (359)
271 1m6y_A S-adenosyl-methyltransf 98.9 2.1E-09 7.3E-14 85.9 6.1 73 1-74 27-105 (301)
272 3cvo_A Methyltransferase-like 98.9 3.4E-08 1.2E-12 74.3 12.2 96 1-118 31-153 (202)
273 3uzu_A Ribosomal RNA small sub 98.9 1.2E-08 4.2E-13 80.7 9.8 59 1-64 43-105 (279)
274 3ftd_A Dimethyladenosine trans 98.8 5.9E-09 2E-13 81.2 7.3 70 1-74 32-102 (249)
275 3s1s_A Restriction endonucleas 98.8 4.3E-08 1.5E-12 86.9 10.4 115 1-122 322-468 (878)
276 4gqb_A Protein arginine N-meth 98.7 2.3E-08 7.8E-13 87.1 8.3 100 2-116 359-464 (637)
277 3ua3_A Protein arginine N-meth 98.7 1.3E-08 4.5E-13 88.8 6.7 100 3-116 412-531 (745)
278 1qyr_A KSGA, high level kasuga 98.7 7E-09 2.4E-13 80.9 3.5 71 1-76 22-99 (252)
279 3evf_A RNA-directed RNA polyme 98.7 7.5E-08 2.6E-12 75.2 9.3 110 1-121 75-186 (277)
280 3khk_A Type I restriction-modi 98.7 2.5E-08 8.5E-13 85.9 7.2 112 3-121 247-397 (544)
281 2oyr_A UPF0341 protein YHIQ; a 98.6 4.1E-08 1.4E-12 76.8 6.2 72 2-74 90-171 (258)
282 3b5i_A S-adenosyl-L-methionine 98.6 8E-08 2.7E-12 78.9 7.9 123 2-124 54-230 (374)
283 2efj_A 3,7-dimethylxanthine me 98.6 4.1E-07 1.4E-11 74.8 10.4 120 3-125 55-231 (384)
284 4auk_A Ribosomal RNA large sub 98.5 5.5E-07 1.9E-11 73.4 10.4 95 1-119 212-306 (375)
285 2qy6_A UPF0209 protein YFCK; s 98.5 2.3E-07 7.9E-12 72.5 6.7 103 2-117 62-211 (257)
286 1m6e_X S-adenosyl-L-methionnin 98.5 3.1E-07 1.1E-11 74.9 7.4 121 3-124 54-214 (359)
287 3c6k_A Spermine synthase; sper 98.5 4.8E-07 1.6E-11 74.0 8.5 110 1-119 206-331 (381)
288 3gcz_A Polyprotein; flavivirus 98.4 5.4E-08 1.9E-12 76.1 1.9 110 1-121 91-203 (282)
289 2wk1_A NOVP; transferase, O-me 98.3 2.3E-06 8E-11 67.6 8.7 103 1-120 107-245 (282)
290 2k4m_A TR8_protein, UPF0146 pr 98.2 9.7E-07 3.3E-11 62.5 4.5 87 1-123 36-125 (153)
291 3eld_A Methyltransferase; flav 98.2 6.2E-06 2.1E-10 65.0 9.3 110 1-121 82-193 (300)
292 1wg8_A Predicted S-adenosylmet 98.2 4E-06 1.4E-10 65.9 7.6 68 1-73 23-95 (285)
293 3ufb_A Type I restriction-modi 98.2 1.1E-05 3.8E-10 69.2 11.0 118 1-120 218-363 (530)
294 2zig_A TTHA0409, putative modi 98.0 1.3E-05 4.5E-10 63.7 7.5 45 1-46 236-280 (297)
295 2oo3_A Protein involved in cat 97.9 9.2E-06 3.1E-10 63.8 4.3 99 1-117 92-196 (283)
296 3p8z_A Mtase, non-structural p 97.9 1.1E-05 3.8E-10 61.5 4.4 111 1-124 79-191 (267)
297 2px2_A Genome polyprotein [con 97.9 6.4E-06 2.2E-10 63.6 3.1 109 1-122 74-186 (269)
298 3lkz_A Non-structural protein 97.8 5.2E-05 1.8E-09 59.7 7.1 110 1-122 95-207 (321)
299 2vz8_A Fatty acid synthase; tr 97.6 2.3E-05 8E-10 77.9 2.7 101 2-120 1242-1349(2512)
300 1i4w_A Mitochondrial replicati 97.5 0.00016 5.5E-09 58.8 6.8 57 2-61 60-117 (353)
301 3g7u_A Cytosine-specific methy 97.3 0.00042 1.4E-08 56.9 6.5 68 2-74 3-78 (376)
302 3r24_A NSP16, 2'-O-methyl tran 97.3 0.00094 3.2E-08 52.6 7.5 105 1-124 110-222 (344)
303 1g55_A DNA cytosine methyltran 97.1 0.00033 1.1E-08 56.8 3.6 68 2-74 3-75 (343)
304 2c7p_A Modification methylase 97.1 0.0013 4.4E-08 53.0 7.0 66 2-74 12-78 (327)
305 3tka_A Ribosomal RNA small sub 97.1 0.0015 5.2E-08 52.5 7.1 69 1-73 58-134 (347)
306 1rjd_A PPM1P, carboxy methyl t 96.9 0.013 4.4E-07 47.2 11.4 107 2-123 99-236 (334)
307 3ubt_Y Modification methylase 96.6 0.0041 1.4E-07 49.7 6.4 66 2-73 1-67 (331)
308 1f8f_A Benzyl alcohol dehydrog 96.4 0.011 3.8E-07 48.0 8.0 93 1-120 191-290 (371)
309 4h0n_A DNMT2; SAH binding, tra 96.3 0.0037 1.3E-07 50.4 4.7 68 2-74 4-76 (333)
310 2qrv_A DNA (cytosine-5)-methyl 96.3 0.011 3.6E-07 46.9 7.2 68 2-74 17-90 (295)
311 2py6_A Methyltransferase FKBM; 96.3 0.01 3.5E-07 49.1 7.3 59 1-59 227-292 (409)
312 3qv2_A 5-cytosine DNA methyltr 96.3 0.0045 1.5E-07 49.8 5.0 66 3-74 12-83 (327)
313 1boo_A Protein (N-4 cytosine-s 96.3 0.005 1.7E-07 49.4 5.1 46 1-47 253-298 (323)
314 2uyo_A Hypothetical protein ML 96.1 0.15 5.3E-06 40.4 12.9 105 2-121 104-220 (310)
315 3m6i_A L-arabinitol 4-dehydrog 96.1 0.042 1.4E-06 44.4 9.8 96 1-121 180-285 (363)
316 1eg2_A Modification methylase 96.0 0.0076 2.6E-07 48.3 4.9 44 1-45 243-289 (319)
317 3fpc_A NADP-dependent alcohol 96.0 0.021 7E-07 46.0 7.4 94 1-121 167-268 (352)
318 4ej6_A Putative zinc-binding d 95.9 0.039 1.3E-06 44.8 8.7 94 1-121 183-286 (370)
319 2dph_A Formaldehyde dismutase; 95.8 0.018 6.2E-07 47.2 6.3 106 1-120 186-300 (398)
320 3me5_A Cytosine-specific methy 95.7 0.011 3.8E-07 50.0 4.9 58 2-61 89-146 (482)
321 4dvj_A Putative zinc-dependent 95.5 0.0082 2.8E-07 48.7 3.3 90 2-118 173-269 (363)
322 3tos_A CALS11; methyltransfera 95.4 0.1 3.6E-06 40.3 9.1 105 2-123 71-221 (257)
323 1pl8_A Human sorbitol dehydrog 95.4 0.042 1.4E-06 44.3 7.3 93 1-120 172-274 (356)
324 3two_A Mannitol dehydrogenase; 95.2 0.02 6.9E-07 46.0 4.8 90 1-122 177-268 (348)
325 3fwz_A Inner membrane protein 95.2 0.18 6.2E-06 34.7 9.2 94 2-121 8-107 (140)
326 2b5w_A Glucose dehydrogenase; 95.2 0.045 1.5E-06 44.1 6.8 90 2-121 174-275 (357)
327 3goh_A Alcohol dehydrogenase, 95.2 0.023 7.9E-07 45.0 4.8 85 1-119 143-229 (315)
328 2zig_A TTHA0409, putative modi 95.2 0.033 1.1E-06 43.9 5.7 61 49-120 20-98 (297)
329 1kol_A Formaldehyde dehydrogen 95.1 0.08 2.7E-06 43.3 8.2 107 1-120 186-301 (398)
330 3uko_A Alcohol dehydrogenase c 95.1 0.045 1.5E-06 44.5 6.5 93 1-120 194-296 (378)
331 3ip1_A Alcohol dehydrogenase, 95.0 0.079 2.7E-06 43.5 7.9 99 1-121 214-320 (404)
332 3s2e_A Zinc-containing alcohol 94.8 0.06 2E-06 43.0 6.4 91 1-121 167-265 (340)
333 4dcm_A Ribosomal RNA large sub 94.8 0.3 1E-05 39.8 10.6 96 2-120 40-137 (375)
334 1e3j_A NADP(H)-dependent ketos 94.7 0.15 5E-06 41.0 8.5 92 1-120 169-272 (352)
335 1p0f_A NADP-dependent alcohol 94.7 0.084 2.9E-06 42.8 7.0 93 1-120 192-294 (373)
336 4a2c_A Galactitol-1-phosphate 94.7 0.17 5.8E-06 40.4 8.7 94 1-121 161-262 (346)
337 3vyw_A MNMC2; tRNA wobble urid 94.6 0.2 6.8E-06 39.7 8.9 102 3-117 99-224 (308)
338 2fzw_A Alcohol dehydrogenase c 94.6 0.11 3.7E-06 42.1 7.5 93 1-120 191-293 (373)
339 3oig_A Enoyl-[acyl-carrier-pro 94.5 0.48 1.6E-05 36.1 10.7 116 1-120 7-148 (266)
340 3o26_A Salutaridine reductase; 94.5 0.68 2.3E-05 35.8 11.7 74 2-77 13-101 (311)
341 3jv7_A ADH-A; dehydrogenase, n 94.5 0.068 2.3E-06 42.8 6.0 94 1-121 172-272 (345)
342 2cdc_A Glucose dehydrogenase g 94.4 0.092 3.1E-06 42.4 6.6 88 1-121 181-280 (366)
343 2d8a_A PH0655, probable L-thre 94.3 0.13 4.5E-06 41.2 7.3 91 1-120 168-268 (348)
344 1cdo_A Alcohol dehydrogenase; 94.1 0.1 3.4E-06 42.3 6.4 93 1-120 193-295 (374)
345 1e3i_A Alcohol dehydrogenase, 94.1 0.099 3.4E-06 42.4 6.3 93 1-120 196-298 (376)
346 3uog_A Alcohol dehydrogenase; 94.0 0.1 3.6E-06 42.1 6.3 92 1-121 190-289 (363)
347 2h6e_A ADH-4, D-arabinose 1-de 94.0 0.016 5.4E-07 46.6 1.3 91 1-120 171-270 (344)
348 1pqw_A Polyketide synthase; ro 94.0 0.097 3.3E-06 38.2 5.6 89 1-120 39-138 (198)
349 1boo_A Protein (N-4 cytosine-s 94.0 0.052 1.8E-06 43.4 4.4 61 49-120 13-85 (323)
350 2jhf_A Alcohol dehydrogenase E 94.0 0.13 4.6E-06 41.5 6.9 93 1-120 192-294 (374)
351 3fbg_A Putative arginate lyase 94.0 0.044 1.5E-06 44.0 3.9 91 1-119 151-248 (346)
352 1zkd_A DUF185; NESG, RPR58, st 93.9 0.19 6.3E-06 41.3 7.4 43 3-45 83-133 (387)
353 1rjw_A ADH-HT, alcohol dehydro 93.9 0.12 4E-06 41.4 6.2 89 1-120 165-262 (339)
354 1vj0_A Alcohol dehydrogenase, 93.8 0.11 3.6E-06 42.4 5.9 94 1-121 196-300 (380)
355 3nx4_A Putative oxidoreductase 93.8 0.16 5.6E-06 40.1 6.9 90 3-121 149-243 (324)
356 3llv_A Exopolyphosphatase-rela 93.7 0.76 2.6E-05 31.3 9.6 62 2-73 7-76 (141)
357 4eso_A Putative oxidoreductase 93.5 0.45 1.5E-05 36.2 8.8 106 1-119 8-138 (255)
358 3grk_A Enoyl-(acyl-carrier-pro 93.5 0.93 3.2E-05 35.3 10.7 114 1-120 31-170 (293)
359 3qwb_A Probable quinone oxidor 93.3 0.18 6.1E-06 40.1 6.3 91 1-120 149-248 (334)
360 1uuf_A YAHK, zinc-type alcohol 93.2 0.03 1E-06 45.5 1.6 90 1-120 195-289 (369)
361 3swr_A DNA (cytosine-5)-methyl 93.2 0.12 4.1E-06 47.4 5.6 51 3-58 542-593 (1002)
362 3jyn_A Quinone oxidoreductase; 93.1 0.18 6.3E-06 39.9 6.1 92 1-121 141-241 (325)
363 3c85_A Putative glutathione-re 93.1 0.69 2.4E-05 33.1 8.8 64 2-73 40-111 (183)
364 4eez_A Alcohol dehydrogenase 1 93.1 0.14 4.8E-06 40.9 5.4 96 1-121 164-265 (348)
365 1v3u_A Leukotriene B4 12- hydr 92.9 0.32 1.1E-05 38.5 7.4 89 1-120 146-245 (333)
366 3pxx_A Carveol dehydrogenase; 92.9 1.3 4.4E-05 34.0 10.7 111 1-119 10-153 (287)
367 4g81_D Putative hexonate dehyd 92.8 0.67 2.3E-05 35.6 8.7 75 1-77 9-96 (255)
368 4b7c_A Probable oxidoreductase 92.8 0.25 8.6E-06 39.2 6.5 90 1-120 150-249 (336)
369 3gms_A Putative NADPH:quinone 92.8 0.2 7E-06 39.9 6.0 92 1-121 145-245 (340)
370 4eye_A Probable oxidoreductase 92.6 0.22 7.5E-06 39.8 6.0 90 1-120 160-258 (342)
371 4fgs_A Probable dehydrogenase 92.6 0.4 1.4E-05 37.3 7.2 107 1-119 29-159 (273)
372 3l9w_A Glutathione-regulated p 92.6 0.62 2.1E-05 38.5 8.7 91 2-120 5-103 (413)
373 2hcy_A Alcohol dehydrogenase 1 92.5 0.19 6.5E-06 40.2 5.6 90 1-120 170-270 (347)
374 3ius_A Uncharacterized conserv 92.3 1.7 5.8E-05 33.1 10.6 62 2-75 6-71 (286)
375 2j3h_A NADP-dependent oxidored 92.3 0.22 7.4E-06 39.7 5.6 89 1-119 156-255 (345)
376 1jvb_A NAD(H)-dependent alcoho 92.2 0.26 9E-06 39.3 6.0 90 1-120 171-272 (347)
377 1eg2_A Modification methylase 92.2 0.18 6.2E-06 40.2 5.0 59 51-120 39-107 (319)
378 2dq4_A L-threonine 3-dehydroge 92.2 0.12 4E-06 41.4 3.9 90 1-120 165-263 (343)
379 4f3n_A Uncharacterized ACR, CO 92.1 0.28 9.5E-06 40.8 6.0 44 2-45 139-188 (432)
380 1g60_A Adenine-specific methyl 92.1 0.12 4.3E-06 39.7 3.7 57 51-118 5-73 (260)
381 3krt_A Crotonyl COA reductase; 92.0 0.65 2.2E-05 38.6 8.3 40 1-41 229-271 (456)
382 3is3_A 17BETA-hydroxysteroid d 91.7 1.4 4.8E-05 33.7 9.4 110 1-120 18-153 (270)
383 1id1_A Putative potassium chan 91.6 1.8 6.1E-05 29.9 9.2 94 2-120 4-106 (153)
384 3ek2_A Enoyl-(acyl-carrier-pro 91.3 1.3 4.3E-05 33.6 8.8 115 1-120 14-154 (271)
385 4ft4_B DNA (cytosine-5)-methyl 91.1 0.23 8E-06 44.4 5.0 53 2-59 213-271 (784)
386 2eih_A Alcohol dehydrogenase; 91.1 0.5 1.7E-05 37.6 6.5 89 1-120 167-266 (343)
387 3pvc_A TRNA 5-methylaminomethy 91.0 0.38 1.3E-05 42.3 6.2 102 3-117 61-209 (689)
388 3o38_A Short chain dehydrogena 90.9 1.2 4.2E-05 33.7 8.4 76 1-77 22-111 (266)
389 2cf5_A Atccad5, CAD, cinnamyl 90.9 0.033 1.1E-06 44.9 -0.6 92 1-120 181-276 (357)
390 3gaz_A Alcohol dehydrogenase s 90.9 0.49 1.7E-05 37.7 6.3 88 1-120 151-247 (343)
391 3edm_A Short chain dehydrogena 90.9 0.77 2.6E-05 34.9 7.2 111 1-119 8-143 (259)
392 1yqd_A Sinapyl alcohol dehydro 90.9 0.057 2E-06 43.7 0.7 92 1-120 188-283 (366)
393 3k31_A Enoyl-(acyl-carrier-pro 90.8 1.5 5.2E-05 34.0 9.0 114 1-120 30-169 (296)
394 3ado_A Lambda-crystallin; L-gu 90.8 1.1 3.7E-05 35.7 8.1 97 2-119 7-123 (319)
395 3v2g_A 3-oxoacyl-[acyl-carrier 90.8 2 6.9E-05 32.9 9.5 111 1-120 31-166 (271)
396 4fn4_A Short chain dehydrogena 90.7 1.1 3.9E-05 34.3 7.9 75 1-77 7-94 (254)
397 3tqh_A Quinone oxidoreductase; 90.6 0.92 3.2E-05 35.7 7.6 89 1-119 153-245 (321)
398 3l4b_C TRKA K+ channel protien 90.4 1.7 5.8E-05 32.0 8.5 90 2-118 1-98 (218)
399 3ijr_A Oxidoreductase, short c 90.3 2.3 7.9E-05 32.9 9.5 110 1-119 47-182 (291)
400 1yb5_A Quinone oxidoreductase; 90.2 0.68 2.3E-05 37.1 6.5 89 1-120 171-270 (351)
401 4dup_A Quinone oxidoreductase; 90.1 0.59 2E-05 37.4 6.1 89 1-120 168-266 (353)
402 2c0c_A Zinc binding alcohol de 90.0 0.77 2.6E-05 36.9 6.7 91 1-120 164-262 (362)
403 1e7w_A Pteridine reductase; di 89.6 3.6 0.00012 31.8 10.1 57 2-61 10-72 (291)
404 4a0s_A Octenoyl-COA reductase/ 89.2 1.6 5.3E-05 36.1 8.2 40 1-41 221-263 (447)
405 3r3s_A Oxidoreductase; structu 89.2 1.7 5.8E-05 33.7 8.0 111 1-120 49-186 (294)
406 2g1u_A Hypothetical protein TM 89.1 0.71 2.4E-05 32.2 5.3 67 1-74 19-91 (155)
407 1tt7_A YHFP; alcohol dehydroge 89.1 0.86 2.9E-05 36.0 6.3 89 3-120 153-248 (330)
408 1qor_A Quinone oxidoreductase; 88.9 0.75 2.6E-05 36.3 5.8 89 1-120 141-240 (327)
409 2j8z_A Quinone oxidoreductase; 88.9 0.95 3.3E-05 36.2 6.5 89 1-120 163-262 (354)
410 2ew2_A 2-dehydropantoate 2-red 88.8 4.7 0.00016 31.1 10.4 92 2-119 4-108 (316)
411 3pk0_A Short-chain dehydrogena 88.8 1.7 5.7E-05 33.1 7.5 75 1-77 10-98 (262)
412 3ucx_A Short chain dehydrogena 88.8 2.5 8.7E-05 32.0 8.6 74 1-76 11-97 (264)
413 3u5t_A 3-oxoacyl-[acyl-carrier 88.8 1.6 5.4E-05 33.4 7.4 111 1-120 27-162 (267)
414 3ps9_A TRNA 5-methylaminomethy 88.7 0.6 2.1E-05 40.9 5.5 102 3-117 69-217 (676)
415 1lss_A TRK system potassium up 88.6 3.9 0.00013 27.2 9.8 64 2-74 5-76 (140)
416 1wly_A CAAR, 2-haloacrylate re 88.3 1.2 4E-05 35.2 6.6 89 1-120 146-245 (333)
417 1zsy_A Mitochondrial 2-enoyl t 88.2 1.4 4.6E-05 35.3 7.0 91 1-119 168-270 (357)
418 3qiv_A Short-chain dehydrogena 88.2 2.1 7.1E-05 32.1 7.7 75 1-77 9-96 (253)
419 3gqv_A Enoyl reductase; medium 88.1 1.5 5.1E-05 35.3 7.2 90 1-119 165-263 (371)
420 2zb4_A Prostaglandin reductase 88.0 1.2 4.2E-05 35.5 6.6 90 2-120 162-261 (357)
421 1xa0_A Putative NADPH dependen 87.9 0.21 7.1E-06 39.6 1.9 91 3-120 152-247 (328)
422 3tjr_A Short chain dehydrogena 87.9 2.3 7.8E-05 33.1 7.9 75 1-77 31-118 (301)
423 1zcj_A Peroxisomal bifunctiona 87.8 6.4 0.00022 32.8 11.1 94 2-117 38-148 (463)
424 4g65_A TRK system potassium up 87.7 0.63 2.2E-05 39.0 4.8 63 2-73 4-74 (461)
425 3dmg_A Probable ribosomal RNA 87.7 2.7 9.1E-05 34.2 8.4 93 2-119 47-139 (381)
426 3ksu_A 3-oxoacyl-acyl carrier 87.7 2.4 8.3E-05 32.2 7.8 110 1-120 11-148 (262)
427 3zwc_A Peroxisomal bifunctiona 87.3 5.9 0.0002 35.3 10.9 97 2-120 317-430 (742)
428 3h7a_A Short chain dehydrogena 87.2 1.5 5E-05 33.2 6.3 75 1-77 7-93 (252)
429 3rkr_A Short chain oxidoreduct 87.0 2.3 8E-05 32.2 7.4 73 2-77 30-116 (262)
430 3ggo_A Prephenate dehydrogenas 86.9 3.5 0.00012 32.4 8.6 90 2-117 34-126 (314)
431 1xu9_A Corticosteroid 11-beta- 86.9 2.3 7.8E-05 32.7 7.3 72 1-74 28-113 (286)
432 2dpo_A L-gulonate 3-dehydrogen 86.7 4.5 0.00015 32.0 9.1 94 2-116 7-120 (319)
433 2eez_A Alanine dehydrogenase; 86.6 0.36 1.2E-05 39.1 2.6 100 1-120 166-267 (369)
434 3lf2_A Short chain oxidoreduct 86.4 3.4 0.00012 31.3 8.1 76 1-77 8-97 (265)
435 3gaf_A 7-alpha-hydroxysteroid 86.4 2.6 8.9E-05 31.9 7.3 74 1-77 12-99 (256)
436 4dkj_A Cytosine-specific methy 86.3 0.66 2.3E-05 38.2 4.1 43 3-45 12-60 (403)
437 3tfo_A Putative 3-oxoacyl-(acy 86.3 2.6 9E-05 32.2 7.4 74 1-77 4-91 (264)
438 1g0o_A Trihydroxynaphthalene r 86.3 5 0.00017 30.7 9.0 109 2-120 30-164 (283)
439 4fs3_A Enoyl-[acyl-carrier-pro 86.2 3.1 0.0001 31.6 7.7 76 1-77 6-96 (256)
440 3sju_A Keto reductase; short-c 85.9 3.3 0.00011 31.7 7.8 74 1-77 24-111 (279)
441 3imf_A Short chain dehydrogena 85.8 2.4 8.3E-05 32.0 6.9 73 1-76 6-92 (257)
442 3lyl_A 3-oxoacyl-(acyl-carrier 85.7 3.4 0.00011 30.8 7.6 74 1-77 5-92 (247)
443 3rih_A Short chain dehydrogena 85.5 1.6 5.6E-05 33.9 5.9 74 2-77 42-129 (293)
444 2vn8_A Reticulon-4-interacting 85.5 0.18 6.1E-06 40.8 0.3 89 1-119 184-280 (375)
445 4dry_A 3-oxoacyl-[acyl-carrier 85.4 2.1 7.2E-05 33.0 6.4 74 2-77 34-121 (281)
446 3v8b_A Putative dehydrogenase, 85.2 3.6 0.00012 31.6 7.7 73 2-77 29-115 (283)
447 3f9i_A 3-oxoacyl-[acyl-carrier 85.2 2.6 9E-05 31.5 6.8 71 1-77 14-94 (249)
448 3svt_A Short-chain type dehydr 85.1 3.9 0.00013 31.2 7.9 75 1-77 11-101 (281)
449 3i1j_A Oxidoreductase, short c 85.1 3.3 0.00011 30.8 7.3 75 1-77 14-104 (247)
450 1zej_A HBD-9, 3-hydroxyacyl-CO 85.1 6.8 0.00023 30.6 9.2 91 2-117 13-105 (293)
451 1qsg_A Enoyl-[acyl-carrier-pro 85.0 8.3 0.00028 29.0 9.7 73 2-77 10-97 (265)
452 3hwr_A 2-dehydropantoate 2-red 85.0 3.7 0.00013 32.2 7.8 95 2-120 20-121 (318)
453 3ioy_A Short-chain dehydrogena 85.0 4.5 0.00015 31.7 8.3 76 1-77 8-97 (319)
454 3l77_A Short-chain alcohol deh 84.9 3.2 0.00011 30.6 7.1 75 1-77 2-90 (235)
455 1iz0_A Quinone oxidoreductase; 84.9 0.38 1.3E-05 37.5 2.0 88 1-120 126-219 (302)
456 1pjc_A Protein (L-alanine dehy 84.9 0.31 1.1E-05 39.4 1.5 101 1-121 167-269 (361)
457 4hp8_A 2-deoxy-D-gluconate 3-d 84.9 4.1 0.00014 31.0 7.7 73 1-77 9-89 (247)
458 3av4_A DNA (cytosine-5)-methyl 84.8 1.2 4.2E-05 42.1 5.5 51 3-58 853-904 (1330)
459 1yb1_A 17-beta-hydroxysteroid 84.7 4.2 0.00015 30.9 7.9 73 1-76 31-117 (272)
460 3nyw_A Putative oxidoreductase 84.5 3.5 0.00012 31.0 7.3 74 2-77 8-97 (250)
461 3awd_A GOX2181, putative polyo 84.5 4.5 0.00015 30.2 7.9 72 2-76 14-99 (260)
462 4e12_A Diketoreductase; oxidor 84.5 3.5 0.00012 31.8 7.3 94 2-116 5-118 (283)
463 2f1k_A Prephenate dehydrogenas 84.5 6.9 0.00024 29.7 9.0 85 3-116 2-88 (279)
464 2vhw_A Alanine dehydrogenase; 84.4 0.58 2E-05 38.1 2.9 41 1-42 168-210 (377)
465 2jah_A Clavulanic acid dehydro 84.0 5.2 0.00018 29.9 8.0 74 1-77 7-94 (247)
466 4egf_A L-xylulose reductase; s 84.0 2.9 9.9E-05 31.8 6.6 74 2-77 21-108 (266)
467 3f1l_A Uncharacterized oxidore 83.7 3.4 0.00012 31.1 6.9 75 1-77 12-102 (252)
468 4fc7_A Peroxisomal 2,4-dienoyl 83.4 3.6 0.00012 31.5 7.0 74 1-76 27-114 (277)
469 3uve_A Carveol dehydrogenase ( 83.3 5.3 0.00018 30.5 7.9 75 1-77 11-114 (286)
470 3t7c_A Carveol dehydrogenase; 83.3 5.3 0.00018 30.9 8.0 75 1-77 28-127 (299)
471 3ce6_A Adenosylhomocysteinase; 83.2 1.4 4.9E-05 37.2 4.8 87 1-121 274-363 (494)
472 3pgx_A Carveol dehydrogenase; 83.2 5.4 0.00018 30.4 7.9 75 1-77 15-115 (280)
473 1zem_A Xylitol dehydrogenase; 83.2 5.4 0.00019 30.1 7.9 74 1-77 7-94 (262)
474 3k6j_A Protein F01G10.3, confi 83.2 14 0.00048 30.8 10.8 96 2-119 55-166 (460)
475 2ae2_A Protein (tropinone redu 83.1 5.3 0.00018 30.1 7.8 74 1-77 9-97 (260)
476 3mog_A Probable 3-hydroxybutyr 83.1 5.2 0.00018 33.6 8.2 96 2-119 6-120 (483)
477 3r1i_A Short-chain type dehydr 83.0 2.9 9.9E-05 32.1 6.3 74 1-77 32-119 (276)
478 2qhx_A Pteridine reductase 1; 83.0 7.5 0.00025 30.6 8.8 57 2-61 47-109 (328)
479 3sx2_A Putative 3-ketoacyl-(ac 83.0 5.1 0.00017 30.5 7.7 75 1-77 13-112 (278)
480 3g0o_A 3-hydroxyisobutyrate de 82.9 4.8 0.00016 31.3 7.6 90 2-119 8-102 (303)
481 1gu7_A Enoyl-[acyl-carrier-pro 82.7 1 3.5E-05 36.1 3.7 31 2-33 169-202 (364)
482 3l6e_A Oxidoreductase, short-c 82.6 5.7 0.0002 29.5 7.7 71 1-77 3-87 (235)
483 1ae1_A Tropinone reductase-I; 82.5 6.2 0.00021 30.0 8.0 73 2-77 22-109 (273)
484 2rhc_B Actinorhodin polyketide 82.4 6.2 0.00021 30.1 7.9 73 2-77 23-109 (277)
485 2pd4_A Enoyl-[acyl-carrier-pro 82.3 5.9 0.0002 30.1 7.8 74 1-77 6-94 (275)
486 2qq5_A DHRS1, dehydrogenase/re 82.2 4.7 0.00016 30.3 7.1 71 2-75 6-91 (260)
487 3ftp_A 3-oxoacyl-[acyl-carrier 82.1 4.4 0.00015 30.9 7.0 73 2-77 29-115 (270)
488 3ppi_A 3-hydroxyacyl-COA dehyd 82.0 3.9 0.00013 31.2 6.7 67 2-74 31-110 (281)
489 3tox_A Short chain dehydrogena 81.9 2.4 8.3E-05 32.6 5.5 73 1-76 8-94 (280)
490 4ibo_A Gluconate dehydrogenase 81.8 2.5 8.7E-05 32.3 5.5 74 1-77 26-113 (271)
491 2h7i_A Enoyl-[acyl-carrier-pro 81.8 2.2 7.5E-05 32.5 5.1 72 1-77 7-97 (269)
492 3c24_A Putative oxidoreductase 81.7 9.7 0.00033 29.1 8.9 83 3-116 13-98 (286)
493 1fmc_A 7 alpha-hydroxysteroid 81.5 5.7 0.00019 29.5 7.3 72 2-76 12-97 (255)
494 3v2h_A D-beta-hydroxybutyrate 81.4 5.1 0.00017 30.7 7.2 75 1-77 25-114 (281)
495 3rd5_A Mypaa.01249.C; ssgcid, 81.4 3 0.0001 32.1 5.9 71 1-77 16-96 (291)
496 3cxt_A Dehydrogenase with diff 81.3 6.3 0.00022 30.4 7.7 73 2-77 35-121 (291)
497 1geg_A Acetoin reductase; SDR 81.2 7.4 0.00025 29.1 7.9 73 1-76 2-88 (256)
498 1xkq_A Short-chain reductase f 81.0 6.4 0.00022 30.0 7.6 74 2-77 7-96 (280)
499 4da9_A Short-chain dehydrogena 80.8 7.5 0.00026 29.7 7.9 73 2-77 30-117 (280)
500 4imr_A 3-oxoacyl-(acyl-carrier 80.8 2.9 0.0001 32.0 5.6 74 1-77 33-119 (275)
No 1
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.89 E-value=1.2e-22 Score=154.67 Aligned_cols=160 Identities=38% Similarity=0.680 Sum_probs=140.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+..+++++|+++.+++.++++... .+++.++++|+..+++++++||+|+++.+++++
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 120 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFPSASFDVVLEKGTLDAL 120 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSCSSCEEEEEEESHHHHH
T ss_pred CCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCCCCcccEEEECcchhhh
Confidence 468999999999999999998766899999999999999998764 358999999999888778899999999999998
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcccccccccCCCCceEEEEEEeCCeeeEEEEEEEeCCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEWITFGDGFHYFFYILRKGKR 160 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (201)
......||....++..+..++++++.++|+|||.+++.++..++....++....+.|.......+++.+++++++++.+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (215)
T 2pxx_A 121 LAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAAPHFRTRHYAQAYYGWSLRHATYGSGFHFHLYLMHKGGK 200 (215)
T ss_dssp TTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCHHHHHHHHCCGGGCEEEEEEEESGGGCEEEEEEEETCC
T ss_pred ccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCCcHHHHHHHhccccCcEEEEEEecCcceEEEEEEEeCCC
Confidence 77778889887777888999999999999999999999998887777777666778988888888888999999988665
Q ss_pred Cc
Q 028957 161 SS 162 (201)
Q Consensus 161 ~~ 162 (201)
..
T Consensus 201 ~~ 202 (215)
T 2pxx_A 201 LS 202 (215)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.80 E-value=5.7e-19 Score=139.15 Aligned_cols=107 Identities=21% Similarity=0.287 Sum_probs=91.5
Q ss_pred CCcEEEecCCCChhhHHHHhcC--CC-eEEEEECCHHHHHHHHHHHhhcC-CCceEEEEcccCCCCCCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG--IT-AITCIDLSAVAVEKMQERLLLKG-YKEVKVLEADMLDLPFSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~--~~-~v~~vD~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 76 (201)
|.+|||+|||+|..+..+++.. .. +|+|+|+|+.|++.|++++...+ ..+++++++|+.++++ +.||+|+++.+
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~--~~~d~v~~~~~ 148 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAI--ENASMVVLNFT 148 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCC--CSEEEEEEESC
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccccc--cccccceeeee
Confidence 5789999999999999998863 22 89999999999999999988766 3479999999988775 46999999999
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+|++ +.++..+++++++++|||||.+++.+...
T Consensus 149 l~~~-------------~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 149 LQFL-------------EPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp GGGS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred eeec-------------CchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 9887 34567789999999999999999876543
No 3
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.79 E-value=1.8e-19 Score=136.91 Aligned_cols=105 Identities=16% Similarity=0.161 Sum_probs=88.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc------------CCCceEEEEcccCCCCCCC-Cc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK------------GYKEVKVLEADMLDLPFSN-DC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~------------~~~~i~~~~~d~~~~~~~~-~~ 67 (201)
+.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.++++.... ..++++++++|+.++++.+ ++
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~ 101 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGH 101 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHS
T ss_pred CCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCC
Confidence 46899999999999999999887 9999999999999999876421 1257999999999887654 78
Q ss_pred eeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 68 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 68 ~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
||+|++..+++++ +.++..+++++++++|||||++++.+
T Consensus 102 fD~v~~~~~l~~l-------------~~~~~~~~l~~~~r~LkpgG~~~l~~ 140 (203)
T 1pjz_A 102 CAAFYDRAAMIAL-------------PADMRERYVQHLEALMPQACSGLLIT 140 (203)
T ss_dssp EEEEEEESCGGGS-------------CHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred EEEEEECcchhhC-------------CHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999998888876 34567789999999999999955444
No 4
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.79 E-value=6.2e-19 Score=138.31 Aligned_cols=105 Identities=17% Similarity=0.295 Sum_probs=93.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.++++....+.+++.++++|+..+++++++||+|++..++|++
T Consensus 38 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~ 116 (260)
T 1vl5_A 38 NEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHF 116 (260)
T ss_dssp CCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGC
T ss_pred CCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHhc
Confidence 46899999999999999998876 99999999999999999988777778999999999988888999999999999876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.+...+++++.++|+|||++++.+..
T Consensus 117 ---------------~d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 117 ---------------PNPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---------------CCHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 45679999999999999999987543
No 5
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.78 E-value=3.5e-19 Score=140.05 Aligned_cols=99 Identities=21% Similarity=0.327 Sum_probs=87.0
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccceee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLF 81 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~ 81 (201)
.+|||+|||+|.++..++..+. +|+|+|+|+.|++.+++ .+++.++++|+.++++++++||+|++..++|++
T Consensus 41 ~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~- 112 (257)
T 4hg2_A 41 GDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF- 112 (257)
T ss_dssp SEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCC------CTTEEEEECCTTCCCCCSSCEEEEEECSCCTTC-
T ss_pred CCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhh------cCCceeehhhhhhhcccCCcccEEEEeeehhHh-
Confidence 5799999999999999999876 99999999999987753 258999999999999999999999999988765
Q ss_pred ecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 82 VNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+..++++++.++|||||.+++..+..+
T Consensus 113 ---------------~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 113 ---------------DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp ---------------CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred ---------------hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 245799999999999999998876644
No 6
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.77 E-value=2.4e-18 Score=133.54 Aligned_cols=106 Identities=25% Similarity=0.331 Sum_probs=95.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.++++....+.+++.++++|+..+++++++||+|++..+++++
T Consensus 22 ~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 100 (239)
T 1xxl_A 22 EHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHF 100 (239)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGC
T ss_pred CCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhhc
Confidence 46899999999999999998876 99999999999999999988777778999999999888888899999999888776
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.+..++++++.++|+|||.+++.+...
T Consensus 101 ---------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 101 ---------------SDVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred ---------------cCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 456889999999999999999876543
No 7
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.77 E-value=1.4e-18 Score=136.21 Aligned_cols=106 Identities=12% Similarity=0.222 Sum_probs=88.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhh-----------------cCCCceEEEEcccCCCCC
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLL-----------------KGYKEVKVLEADMLDLPF 63 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~-----------------~~~~~i~~~~~d~~~~~~ 63 (201)
+.+|||+|||+|..+..+++.|. +|+|+|+|+.+++.++++... ....+++++++|+.+++.
T Consensus 69 ~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~ 147 (252)
T 2gb4_A 69 GLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR 147 (252)
T ss_dssp SCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG
T ss_pred CCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc
Confidence 46899999999999999999988 999999999999999876531 012579999999998876
Q ss_pred CC-CceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 64 SN-DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 64 ~~-~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.. ++||+|++..+++++ +.++..++++++.++|||||++++.++
T Consensus 148 ~~~~~FD~V~~~~~l~~l-------------~~~~~~~~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 148 ANIGKFDRIWDRGALVAI-------------NPGDHDRYADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp GCCCCEEEEEESSSTTTS-------------CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccCCCEEEEEEhhhhhhC-------------CHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 53 799999999888876 235677899999999999999876543
No 8
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.76 E-value=1.3e-17 Score=127.41 Aligned_cols=106 Identities=21% Similarity=0.298 Sum_probs=91.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-----ceEEEEcccCCCCCCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-----EVKVLEADMLDLPFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-----~i~~~~~d~~~~~~~~~~~D~v~~~ 74 (201)
+.+|||+|||+|.++..+++.++. +|+++|+++.+++.+++++...+.+ ++.++++|+...+.+.++||+|++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 109 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVI 109 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeH
Confidence 468999999999999999998653 9999999999999999998766644 7999999997766666799999999
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.+++++ ..++..++++++.++|+|||.+++..
T Consensus 110 ~~l~~~-------------~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 110 EVIEHL-------------DLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp SCGGGC-------------CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HHHHcC-------------CHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 999887 33567899999999999999766554
No 9
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.76 E-value=9.7e-18 Score=125.92 Aligned_cols=105 Identities=21% Similarity=0.407 Sum_probs=92.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +++++|+++.+++.++++....+.+++.++++|+.++++ .++||+|++..+++++
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~ 110 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFL 110 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGS
T ss_pred CCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhC
Confidence 46899999999999999998866 999999999999999999887776689999999998777 7899999999998876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..++..++++++.++|+|||.+++.+.
T Consensus 111 -------------~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 111 -------------EAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp -------------CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -------------CHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 335778999999999999999877653
No 10
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.75 E-value=5.3e-18 Score=129.50 Aligned_cols=107 Identities=22% Similarity=0.316 Sum_probs=95.4
Q ss_pred CCcEEEecCCCChhhHHHHhcC-CC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-IT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+ +. +|+++|+++.+++.+++++...+.+++.++++|+..++++.++||+|++..+++
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 117 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFH 117 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGG
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhh
Confidence 4689999999999999999885 33 999999999999999999988877789999999998888888999999999988
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
++ .+...+++++.++|+|||.+++.++..
T Consensus 118 ~~---------------~~~~~~l~~~~~~LkpgG~l~i~~~~~ 146 (219)
T 3dh0_A 118 EL---------------SEPLKFLEELKRVAKPFAYLAIIDWKK 146 (219)
T ss_dssp GC---------------SSHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred hc---------------CCHHHHHHHHHHHhCCCeEEEEEEecc
Confidence 76 456899999999999999999987653
No 11
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.75 E-value=7e-18 Score=131.69 Aligned_cols=103 Identities=21% Similarity=0.269 Sum_probs=91.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+..+|+++|+++.+++.++++.. ..++.++++|+..++++.++||+|++..+++++
T Consensus 45 ~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 121 (253)
T 3g5l_A 45 QKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYI 121 (253)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCCCCeEEEEEchhhhhh
Confidence 46899999999999999999977699999999999999998865 258999999999888888999999999998876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++..++++++.++|+|||.+++....
T Consensus 122 ---------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 122 ---------------ASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------------hhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 56789999999999999999987554
No 12
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=1.1e-17 Score=130.71 Aligned_cols=104 Identities=21% Similarity=0.281 Sum_probs=92.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCc-eEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.++.+|+++|+++.+++.++++....+.++ +.++++|+..+++++++||+|++..++++
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 126 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYN 126 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCC
T ss_pred CCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhh
Confidence 46899999999999999999865699999999999999999998877544 99999999988888899999999988876
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+ +..++++++.++|+|||++++.+.
T Consensus 127 ~----------------~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 127 I----------------GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp C----------------CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred c----------------CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 4 357899999999999999998864
No 13
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.75 E-value=2.1e-17 Score=126.33 Aligned_cols=106 Identities=20% Similarity=0.345 Sum_probs=90.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-----ceEEEEcccCCCCCCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-----EVKVLEADMLDLPFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-----~i~~~~~d~~~~~~~~~~~D~v~~~ 74 (201)
+.+|||+|||+|.++..+++.++. +|+++|+++.+++.+++++...+.+ ++.++++|+...+.+.++||+|++.
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~ 109 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVI 109 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEH
Confidence 468999999999999999988753 9999999999999999998765543 7999999997776667899999999
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.+++++ ..++..++++++.++|+|||.++...
T Consensus 110 ~~l~~~-------------~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 110 EVIEHL-------------DENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp SCGGGC-------------CHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred HHHHhC-------------CHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 999887 33466899999999999999666543
No 14
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.74 E-value=1.3e-17 Score=128.61 Aligned_cols=107 Identities=24% Similarity=0.346 Sum_probs=92.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++..+. +++++|+++.+++.+++++...+ ++.++++|+.+++++ ++||+|++..++++
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~ 121 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFE-EKYDMVVSALSIHH 121 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCC-SCEEEEEEESCGGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCC-CCceEEEEeCcccc
Confidence 468999999999999999988533 99999999999999999876654 899999999988776 89999999999987
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+ ......++++++.++|+|||.+++.++..+
T Consensus 122 ~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 122 L-------------EDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp S-------------CHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred C-------------CHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 7 334556799999999999999998876543
No 15
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.74 E-value=6.9e-18 Score=127.47 Aligned_cols=104 Identities=16% Similarity=0.200 Sum_probs=91.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.++++. +++.++++|+.++++++++||+|++..+++++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTH-----PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHM 115 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHC-----TTSEEECCCGGGGGGSCCCEEEEEEESSSTTC
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhC-----CCCeEEeCcccccccCCCCeEEEEehhhHhcC
Confidence 47899999999999999999877 9999999999999998873 47899999999888778999999999888876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
..++..++++++.++|+|||.+++..+...
T Consensus 116 -------------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 116 -------------GPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp -------------CTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred -------------CHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 234778999999999999999998876654
No 16
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.74 E-value=9.3e-18 Score=133.32 Aligned_cols=105 Identities=19% Similarity=0.338 Sum_probs=92.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCC-CCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLP-FSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~-~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.+++++...+. +++.++++|+..++ +.+++||+|++..+++
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 147 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLE 147 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGG
T ss_pred CCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhh
Confidence 46899999999999999999866 999999999999999999887775 68999999999876 6678999999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++ .+..++++++.++|+|||.+++..++
T Consensus 148 ~~---------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 148 WV---------------ADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp GC---------------SCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred cc---------------cCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 76 45678999999999999999988754
No 17
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.74 E-value=9.4e-18 Score=130.21 Aligned_cols=108 Identities=17% Similarity=0.250 Sum_probs=92.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.++++....+..++.++++|+..++++.++||+|++..+++++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 159 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHL 159 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhC
Confidence 46899999999999999988865599999999999999999887654346899999998888777799999999998876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
..+...++++++.++|+|||.+++.++.
T Consensus 160 -------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 160 -------------TDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp -------------CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -------------CHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 2344679999999999999999987654
No 18
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.74 E-value=1.9e-17 Score=130.36 Aligned_cols=105 Identities=18% Similarity=0.283 Sum_probs=92.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.+..+|+++|+++.+++.++++....+. +++.++++|+.+++++.++||+|++..++++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~ 126 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYN 126 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGG
T ss_pred CCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCcee
Confidence 478999999999999999998444999999999999999999888775 4599999999988888889999999988876
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+ +..++++++.++|+|||.+++.+..
T Consensus 127 ~----------------~~~~~l~~~~~~LkpgG~l~~~~~~ 152 (267)
T 3kkz_A 127 I----------------GFERGLNEWRKYLKKGGYLAVSECS 152 (267)
T ss_dssp T----------------CHHHHHHHHGGGEEEEEEEEEEEEE
T ss_pred c----------------CHHHHHHHHHHHcCCCCEEEEEEee
Confidence 4 3578999999999999999987653
No 19
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.74 E-value=1.4e-17 Score=131.62 Aligned_cols=105 Identities=32% Similarity=0.473 Sum_probs=94.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.++. +|+++|+++.+++.+++++...+.+++.++.+|+..++++.++||+|++..++++
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 117 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEH 117 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhh
Confidence 468999999999999999988543 9999999999999999999888877899999999998888899999999999987
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+ .+...+++++.++|+|||.+++.+.
T Consensus 118 ~---------------~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 118 L---------------QSPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp C---------------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred c---------------CCHHHHHHHHHHHcCCCcEEEEEEc
Confidence 6 4556899999999999999998764
No 20
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.74 E-value=1.1e-17 Score=130.56 Aligned_cols=104 Identities=21% Similarity=0.196 Sum_probs=90.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++....+|+++|+++.+++.++++....+. +++.++++|+.++++ +++||+|++..++++
T Consensus 37 ~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~ 115 (256)
T 1nkv_A 37 GTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGATWI 115 (256)
T ss_dssp TCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCChHh
Confidence 468999999999999999887433999999999999999999887765 479999999998776 789999999888876
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+ .+..++++++.++|||||++++.+.
T Consensus 116 ~---------------~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 116 A---------------GGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp T---------------SSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred c---------------CCHHHHHHHHHHHcCCCeEEEEecC
Confidence 5 3568899999999999999998754
No 21
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.74 E-value=1e-17 Score=131.25 Aligned_cols=106 Identities=19% Similarity=0.326 Sum_probs=93.6
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..++.. +. +|+++|+++.+++.++++.... +++.++++|+..++++.++||+|++..++++
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 132 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFPENNFDLIYSRDAILA 132 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCCTTCEEEEEEESCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCCCCcEEEEeHHHHHHh
Confidence 468999999999999999987 55 9999999999999999886554 5899999999998888899999999999887
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+ +..+...+++++.++|+|||.+++.++..
T Consensus 133 ~-------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 162 (266)
T 3ujc_A 133 L-------------SLENKNKLFQKCYKWLKPTGTLLITDYCA 162 (266)
T ss_dssp S-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred c-------------ChHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 6 34788999999999999999999887543
No 22
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.74 E-value=3.2e-17 Score=125.61 Aligned_cols=108 Identities=27% Similarity=0.368 Sum_probs=93.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.++ +++++|+++.+++.++++....+ +++.++++|+.+++++.++||+|+++.+++..
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 46899999999999999999887 99999999999999999987765 58999999999877777899999998885443
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+..+..++++++.++|+|||.+++.++..+
T Consensus 117 -------------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 146 (227)
T 1ve3_A 117 -------------EPLELNQVFKEVRRVLKPSGKFIMYFTDLR 146 (227)
T ss_dssp -------------CHHHHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred -------------CHHHHHHHHHHHHHHcCCCcEEEEEecChH
Confidence 346788999999999999999998876533
No 23
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.74 E-value=1.1e-17 Score=127.56 Aligned_cols=104 Identities=21% Similarity=0.370 Sum_probs=91.0
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccceee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLF 81 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~ 81 (201)
.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.... +++.++++|+.+++ +.++||+|+++.++|++
T Consensus 53 ~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~- 127 (216)
T 3ofk_A 53 SNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRW--SHISWAATDILQFS-TAELFDLIVVAEVLYYL- 127 (216)
T ss_dssp EEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTC--SSEEEEECCTTTCC-CSCCEEEEEEESCGGGS-
T ss_pred CcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccC--CCeEEEEcchhhCC-CCCCccEEEEccHHHhC-
Confidence 5899999999999999998875 9999999999999999987664 38999999999877 57899999999999887
Q ss_pred ecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 82 VNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
...+...++++++.++|+|||.+++.+..
T Consensus 128 -----------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 128 -----------EDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp -----------SSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred -----------CCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 23456678999999999999999987644
No 24
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.74 E-value=9.7e-18 Score=129.89 Aligned_cols=102 Identities=21% Similarity=0.262 Sum_probs=89.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++... ++.++++|+.++ .++++||+|++..+++++
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD----GITYIHSRFEDA-QLPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGC-CCSSCEEEEEEESCGGGC
T ss_pred CCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHc-CcCCcccEEEEhhHHHhh
Confidence 46899999999999999998877 899999999999999987643 789999999886 457899999999999876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHh-hcccCCcEEEEEecCCc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVH-RVLKPDGLFISVSFGQP 123 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~-~~L~~gG~l~~~~~~~~ 123 (201)
.+..++++++. ++|+|||.+++.+++..
T Consensus 117 ---------------~~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 117 ---------------DDPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp ---------------SSHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred ---------------cCHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 45689999999 99999999999876543
No 25
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.73 E-value=3.6e-17 Score=130.00 Aligned_cols=104 Identities=18% Similarity=0.259 Sum_probs=92.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.++++....+. ++.++++|+...+. .++||+|+++.++|++
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~ 197 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI-QENYDFIVSTVVFMFL 197 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC-CSCEEEEEECSSGGGS
T ss_pred CCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc-cCCccEEEEccchhhC
Confidence 46899999999999999999977 999999999999999999988776 89999999998766 6899999999999876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+.+....+++++.++|+|||.+++...
T Consensus 198 -------------~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 198 -------------NRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp -------------CGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred -------------CHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 346678999999999999999776543
No 26
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.73 E-value=3.8e-17 Score=125.64 Aligned_cols=109 Identities=25% Similarity=0.448 Sum_probs=94.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-----CceEEEEcccCCCCCCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-----KEVKVLEADMLDLPFSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-----~~i~~~~~d~~~~~~~~~~~D~v~~~~ 75 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.++++....+. .++.++++|+..++++.++||+|++..
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 109 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQA 109 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEES
T ss_pred CCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcc
Confidence 46899999999999999999966 999999999999999998876653 258999999998888889999999999
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+++++ .......++++++.++|+|||.+++.++..
T Consensus 110 ~l~~~------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (235)
T 3sm3_A 110 FLTSV------------PDPKERSRIIKEVFRVLKPGAYLYLVEFGQ 144 (235)
T ss_dssp CGGGC------------CCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred hhhcC------------CCHHHHHHHHHHHHHHcCCCeEEEEEECCc
Confidence 98876 233556699999999999999999987654
No 27
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.73 E-value=3e-17 Score=124.95 Aligned_cols=104 Identities=21% Similarity=0.265 Sum_probs=90.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.+++ .+.+++.++++|+.++ ++.++||+|++..++|++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~ 120 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHV 120 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSC-CCSSCEEEEEEESCGGGS
T ss_pred CCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCCCCeEEEecccccC-CCCCceeEEEEechhhcC
Confidence 46899999999999999999866 99999999999999987 3446899999999887 677899999999999887
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
..+....+++++.++|+|||.+++.++..+
T Consensus 121 -------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 121 -------------PDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp -------------CHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred -------------CHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 334568999999999999999999887653
No 28
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.73 E-value=1.9e-17 Score=129.05 Aligned_cols=105 Identities=16% Similarity=0.235 Sum_probs=92.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.++++.... +++.++++|+..++++.++||+|++..+++++
T Consensus 94 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 171 (254)
T 1xtp_A 94 TSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATLPPNTYDLIVIQWTAIYL 171 (254)
T ss_dssp CSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCCCSSCEEEEEEESCGGGS
T ss_pred CCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCCCCCCeEEEEEcchhhhC
Confidence 4689999999999999998886558999999999999999987654 57999999999888878899999999998876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..++..++++++.++|+|||.+++.+.
T Consensus 172 -------------~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 172 -------------TDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp -------------CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -------------CHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 335688999999999999999998875
No 29
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.73 E-value=2.3e-17 Score=131.67 Aligned_cols=105 Identities=20% Similarity=0.385 Sum_probs=93.3
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++. +. +|+++|+++.+++.++++....+. +++.++++|+..+++++++||+|++..+++
T Consensus 83 ~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 161 (297)
T 2o57_A 83 QAKGLDLGAGYGGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFL 161 (297)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGG
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhh
Confidence 468999999999999999887 55 999999999999999999877664 479999999999888889999999999988
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++ .+...+++++.++|+|||.+++.++.
T Consensus 162 ~~---------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 162 HS---------------PDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp GC---------------SCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hc---------------CCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 76 44689999999999999999988754
No 30
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.73 E-value=3.3e-17 Score=124.09 Aligned_cols=109 Identities=21% Similarity=0.324 Sum_probs=91.6
Q ss_pred CCcEEEecCCCChhhHH-HHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEG-LYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~-l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|..+.. ++..+. +|+++|+++.+++.++++....+ .++.++++|+..+++++++||+|++..++++
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVEDGY-KTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHHTTC-EEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CCEEEEECCCCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 46899999999998544 444455 99999999999999999887655 4789999999988887889999999888876
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
+ ..++..++++++.++|+|||.+++.+++.+.
T Consensus 102 ~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 102 M-------------RKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp S-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred C-------------CHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 5 3467899999999999999999998876543
No 31
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.73 E-value=4.7e-17 Score=121.81 Aligned_cols=108 Identities=12% Similarity=0.132 Sum_probs=91.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--CCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++...+.++++++++|+.+.. ++.++||+|+++..++
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~ 124 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYN 124 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTT
T ss_pred CCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCC
Confidence 46899999999999998888776689999999999999999998887778999999998753 4468899999876654
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhh--cccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHR--VLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~L~~gG~l~~~~~~~ 122 (201)
.. .++..++++.+.+ +|+|||.+++.....
T Consensus 125 ~~--------------~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 125 VD--------------SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp SC--------------HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred cc--------------hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 32 2678899999999 999999999876554
No 32
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.73 E-value=2.7e-17 Score=129.61 Aligned_cols=106 Identities=27% Similarity=0.405 Sum_probs=92.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++....+|+++|+++.+++.++++....+. +++.++++|+..+++++++||+|++..++++
T Consensus 62 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 141 (273)
T 3bus_A 62 GDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHH 141 (273)
T ss_dssp TCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTT
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhh
Confidence 468999999999999999886334999999999999999999887664 3699999999998888889999999988876
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+ .+..++++++.++|+|||++++.++.
T Consensus 142 ~---------------~~~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 142 M---------------PDRGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp S---------------SCHHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred C---------------CCHHHHHHHHHHHcCCCeEEEEEEee
Confidence 6 45589999999999999999987754
No 33
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.73 E-value=3e-17 Score=124.77 Aligned_cols=103 Identities=17% Similarity=0.305 Sum_probs=91.4
Q ss_pred cEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccceee
Q 028957 3 SVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEVLF 81 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~ 81 (201)
+|||+|||+|.++..+++....+++++|+++.+++.+++++...+. +++.++++|+.+++++.++||+|++..+++++
T Consensus 46 ~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~- 124 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW- 124 (219)
T ss_dssp EEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC-
T ss_pred EEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc-
Confidence 7999999999999999987222999999999999999999887764 47999999999988888999999999988876
Q ss_pred ecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 82 VNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.+..++++++.++|+|||.+++.+.
T Consensus 125 --------------~~~~~~l~~~~~~L~pgG~l~~~~~ 149 (219)
T 3dlc_A 125 --------------EDVATAFREIYRILKSGGKTYIGGG 149 (219)
T ss_dssp --------------SCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred --------------cCHHHHHHHHHHhCCCCCEEEEEec
Confidence 5668899999999999999998753
No 34
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.73 E-value=3e-17 Score=125.37 Aligned_cols=102 Identities=22% Similarity=0.293 Sum_probs=88.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +++++|+++.+++.++++.. .++.++++|+.+++++ ++||+|++..+++++
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~ 119 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHL 119 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC-SCCSEEEEESCGGGS
T ss_pred CCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC-CCeEEEEECcchhcC
Confidence 46899999999999999999866 99999999999999998865 3789999999998877 899999999999877
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.......+++++.++|+|||.+++.++.
T Consensus 120 -------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 120 -------------TDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp -------------CHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred -------------ChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 2233455999999999999999988644
No 35
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.72 E-value=3.2e-17 Score=128.30 Aligned_cols=101 Identities=25% Similarity=0.383 Sum_probs=89.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++ ....+++.++++|+..+++++++||+|++..++|++
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 117 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIARGY-RYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLV 117 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTTTC-EEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCEEEEeCCcCCHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCCCCeeEEEECCchhhc
Confidence 46899999999999999998865 9999999999999999987 333468999999999888878899999999998876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
.+..++++++.++|+|||.+++.
T Consensus 118 ---------------~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 118 ---------------PDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp ---------------TTHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---------------CCHHHHHHHHHHHCCCCcEEEEE
Confidence 46788999999999999998876
No 36
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.72 E-value=1.5e-17 Score=133.58 Aligned_cols=111 Identities=14% Similarity=0.187 Sum_probs=86.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCC------ceEEEEcccC------CC--CCCCC
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK------EVKVLEADML------DL--PFSND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~------~i~~~~~d~~------~~--~~~~~ 66 (201)
+.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|+++....+.. ++.+.+.|+. ++ +++.+
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~ 128 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFG 128 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSS
T ss_pred CCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 4689999999998777666665459999999999999999987665421 2567888872 22 24568
Q ss_pred ceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 67 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 67 ~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+||+|+|..++|+++ +.++..++++++.++|||||.+++.+++..
T Consensus 129 ~FD~V~~~~~lhy~~------------~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~ 173 (302)
T 2vdw_A 129 KFNIIDWQFAIHYSF------------HPRHYATVMNNLSELTASGGKVLITTMDGD 173 (302)
T ss_dssp CEEEEEEESCGGGTC------------STTTHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred CeeEEEECchHHHhC------------CHHHHHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 999999999998763 113457999999999999999998877543
No 37
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.72 E-value=5.3e-17 Score=129.25 Aligned_cols=111 Identities=23% Similarity=0.277 Sum_probs=95.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCC-CCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPF-SNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~-~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.++++....+. .++.++++|+...++ +.++||+|++..++|
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~ 144 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFH 144 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGG
T ss_pred CCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhh
Confidence 468999999999999998887655999999999999999999887653 468999999998776 578999999998887
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+.+ .+..+..++++++.++|+|||.+++..++.
T Consensus 145 ~~~-----------~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 145 YAF-----------STSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp GGG-----------SSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred hhc-----------CCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 642 245788999999999999999999887654
No 38
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.72 E-value=4.2e-17 Score=131.39 Aligned_cols=104 Identities=17% Similarity=0.259 Sum_probs=93.0
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++. +. +|+++|+++.+++.++++....++. ++.++++|+.+++++.++||+|++..+++
T Consensus 118 ~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~ 196 (312)
T 3vc1_A 118 DDTLVDAGCGRGGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTM 196 (312)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGG
T ss_pred CCEEEEecCCCCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchh
Confidence 468999999999999999987 65 8999999999999999999887754 79999999999888889999999998887
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++ +..++++++.++|+|||++++.+..
T Consensus 197 ~~----------------~~~~~l~~~~~~LkpgG~l~~~~~~ 223 (312)
T 3vc1_A 197 YV----------------DLHDLFSEHSRFLKVGGRYVTITGC 223 (312)
T ss_dssp GS----------------CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hC----------------CHHHHHHHHHHHcCCCcEEEEEEcc
Confidence 65 2789999999999999999987754
No 39
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.72 E-value=8.7e-17 Score=122.72 Aligned_cols=112 Identities=20% Similarity=0.304 Sum_probs=91.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--CCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|.++..++...+. +++++|+++.+++.++++....+.+++.++++|+..++ ++.++||+|+++.
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~-- 119 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNF-- 119 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEES--
T ss_pred CCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEEC--
Confidence 368999999999999999988654 99999999999999999998877778999999998865 6678899999752
Q ss_pred ceeeecCCCCCCCCCccHH--HHHHHHHHHhhcccCCcEEEEEecC
Q 028957 78 EVLFVNSGDPWNPQPETVT--KVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++||.+..+... ....+++++.++|+|||.+++.+..
T Consensus 120 -------~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 120 -------SDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp -------CCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred -------CCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 466755332222 2468999999999999999987643
No 40
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.72 E-value=3e-17 Score=127.02 Aligned_cols=103 Identities=27% Similarity=0.469 Sum_probs=90.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.. ..++.++++|+.++++++++||+|++..+++++
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGE---GPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTC---BTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcc---cCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 46899999999999999999976 99999999999999987742 257999999999988888999999999888776
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.+..++++++.++|+|||.+++.++..
T Consensus 130 ---------------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 156 (242)
T 3l8d_A 130 ---------------EEPLRALNEIKRVLKSDGYACIAILGP 156 (242)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ---------------cCHHHHHHHHHHHhCCCeEEEEEEcCC
Confidence 456789999999999999999887554
No 41
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.71 E-value=7.3e-17 Score=120.18 Aligned_cols=113 Identities=14% Similarity=0.132 Sum_probs=86.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-CCCCceeEEEeccc-cc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-FSNDCFDVVIEKAT-ME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~v~~~~~-l~ 78 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++...+.+++++++.++..+. +.+++||+|+++.. ++
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~ 101 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGLSK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLP 101 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC---
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCC
Confidence 57899999999999999998844 99999999999999999998877778999998877643 44678999987521 11
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
. .++.. ........++++++.++|||||++++..+.
T Consensus 102 ~-----~~~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 102 S-----ADKSV--ITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp ---------------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred C-----cchhc--ccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 1 00000 012355678899999999999999988765
No 42
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.71 E-value=1.2e-16 Score=128.12 Aligned_cols=113 Identities=12% Similarity=0.160 Sum_probs=93.9
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++. +. +|+++|+++.+++.++++....+.+ ++.++.+|+.++ +++||+|++..+++
T Consensus 73 ~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~ 148 (302)
T 3hem_A 73 GMTLLDIGCGWGSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFE 148 (302)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGG
T ss_pred cCEEEEeeccCcHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHH
Confidence 468999999999999999988 64 9999999999999999999887754 799999999876 68999999998888
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++ ++|+. ..+.+....+++++.++|+|||++++.++..+
T Consensus 149 ~~----~d~~~--~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 187 (302)
T 3hem_A 149 HF----ADGAG--DAGFERYDTFFKKFYNLTPDDGRMLLHTITIP 187 (302)
T ss_dssp GT----TCCSS--CCCTTHHHHHHHHHHHSSCTTCEEEEEEEECC
T ss_pred hc----Ccccc--ccchhHHHHHHHHHHHhcCCCcEEEEEEEecc
Confidence 76 12110 00235678999999999999999998876544
No 43
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.71 E-value=7.5e-17 Score=118.46 Aligned_cols=99 Identities=20% Similarity=0.445 Sum_probs=86.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +++++|+++.+++.++++ .+++.+..+| .+++.++||+|++..+++++
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK-----FDSVITLSDP---KEIPDNSVDFILFANSFHDM 88 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH-----CTTSEEESSG---GGSCTTCEEEEEEESCSTTC
T ss_pred CCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh-----CCCcEEEeCC---CCCCCCceEEEEEccchhcc
Confidence 35899999999999999999876 999999999999999987 3588999998 56667899999999888766
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++...+++++.++|+|||++++.++...
T Consensus 89 ---------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 116 (170)
T 3i9f_A 89 ---------------DDKQHVISEVKRILKDDGRVIIIDWRKE 116 (170)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred ---------------cCHHHHHHHHHHhcCCCCEEEEEEcCcc
Confidence 4568999999999999999999876543
No 44
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.71 E-value=7.1e-17 Score=123.38 Aligned_cols=112 Identities=17% Similarity=0.219 Sum_probs=91.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--CCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|.++..+++..+. +++|+|+++.+++.++++....+.+++.++++|+..++ ++.++||.|++.
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~--- 115 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLN--- 115 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEE---
T ss_pred CceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEE---
Confidence 358999999999999999987544 99999999999999999998888788999999998764 667789988752
Q ss_pred ceeeecCCCCCCCCCccHHH--HHHHHHHHhhcccCCcEEEEEecC
Q 028957 78 EVLFVNSGDPWNPQPETVTK--VMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+++||.+..+.... ...+++++.++|+|||.+++.+..
T Consensus 116 ------~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 116 ------FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp ------SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred ------CCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 35678654332222 368999999999999999987643
No 45
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.71 E-value=6.6e-17 Score=126.92 Aligned_cols=103 Identities=20% Similarity=0.254 Sum_probs=89.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecc-ccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA-TMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~-~l~~ 79 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.. ++.++++|+..+++ .++||+|++.. ++++
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~ 123 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSL-GRRFSAVTCMFSSIGH 123 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCC-SCCEEEEEECTTGGGG
T ss_pred CCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCc-cCCcCEEEEcCchhhh
Confidence 36899999999999999998876 89999999999999998743 78999999998776 68999999987 8887
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+ .+.++..++++++.++|+|||.+++..+..
T Consensus 124 ~------------~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 124 L------------AGQAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp S------------CHHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred c------------CCHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 6 244678899999999999999999875433
No 46
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.71 E-value=3.6e-17 Score=126.34 Aligned_cols=106 Identities=18% Similarity=0.264 Sum_probs=90.7
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC-CCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG-YKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
.+|||+|||+|.++..++..+. +|+++|+++.+++.++++....+ ..++.++++|+.+.+ +.++||+|++..+++++
T Consensus 68 ~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 145 (235)
T 3lcc_A 68 GRALVPGCGGGHDVVAMASPER-FVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWR-PTELFDLIFDYVFFCAI 145 (235)
T ss_dssp EEEEEETCTTCHHHHHHCBTTE-EEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCC-CSSCEEEEEEESSTTTS
T ss_pred CCEEEeCCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCC-CCCCeeEEEEChhhhcC
Confidence 4899999999999999987665 89999999999999999987543 357999999998866 34689999999988876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
..++..++++++.++|+|||.+++..+..
T Consensus 146 -------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 174 (235)
T 3lcc_A 146 -------------EPEMRPAWAKSMYELLKPDGELITLMYPI 174 (235)
T ss_dssp -------------CGGGHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred -------------CHHHHHHHHHHHHHHCCCCcEEEEEEecc
Confidence 33578899999999999999999877654
No 47
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.70 E-value=8.1e-17 Score=122.36 Aligned_cols=101 Identities=26% Similarity=0.366 Sum_probs=88.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++. ++.+..+|+..++ ..++||+|++..+++++
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~ 115 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL------GRPVRTMLFHQLD-AIDAYDAVWAHACLLHV 115 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC-CCSCEEEEEECSCGGGS
T ss_pred CCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc------CCceEEeeeccCC-CCCcEEEEEecCchhhc
Confidence 46899999999999999999876 9999999999999999886 4577889988877 67899999999999877
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
..++...+++++.++|+|||.+++.....
T Consensus 116 -------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 144 (211)
T 3e23_A 116 -------------PRDELADVLKLIWRALKPGGLFYASYKSG 144 (211)
T ss_dssp -------------CHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred -------------CHHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 34578899999999999999999876543
No 48
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.70 E-value=6.6e-17 Score=125.07 Aligned_cols=103 Identities=20% Similarity=0.334 Sum_probs=90.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+..+|+++|+++.+++.++++... .++.++++|+..++++.++||+|++..+++++
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 120 (243)
T 3bkw_A 44 GLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLPQDSFDLAYSSLALHYV 120 (243)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCCTTCEEEEEEESCGGGC
T ss_pred CCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCCCCCceEEEEecccccc
Confidence 468999999999999999988665899999999999999887643 37899999999888778899999999888766
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.+..++++++.++|+|||.+++.+..
T Consensus 121 ---------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 121 ---------------EDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ---------------chHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 45689999999999999999987754
No 49
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.70 E-value=1.1e-16 Score=123.84 Aligned_cols=106 Identities=20% Similarity=0.306 Sum_probs=92.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecc-ccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA-TMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~-~l~~ 79 (201)
+.+|||+|||+|.++..+++.+. +++++|+++.+++.++++....+. ++.++++|+..++++ ++||+|++.. ++++
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~ 114 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNIN-RKFDLITCCLDSTNY 114 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCS-CCEEEEEECTTGGGG
T ss_pred CCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCcc-CCceEEEEcCccccc
Confidence 46899999999999999998876 899999999999999999877654 789999999887766 8899999988 8887
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+ ...++..++++++.++|+|||.+++....
T Consensus 115 ~------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 144 (246)
T 1y8c_A 115 I------------IDSDDLKKYFKAVSNHLKEGGVFIFDINS 144 (246)
T ss_dssp C------------CSHHHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred c------------CCHHHHHHHHHHHHHhcCCCcEEEEEecC
Confidence 6 23467889999999999999999986554
No 50
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.70 E-value=2.8e-16 Score=119.00 Aligned_cols=107 Identities=17% Similarity=0.220 Sum_probs=87.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC--CceEEEEcccCCCC--CCCCc-eeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY--KEVKVLEADMLDLP--FSNDC-FDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~--~~~~~-~D~v~~~~ 75 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++...+. ++++++++|+.+.. .+.++ ||+|+++.
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 133 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDP 133 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECC
T ss_pred CCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECC
Confidence 468999999999999988877766999999999999999999988876 68999999987643 23578 99999865
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHH--hhcccCCcEEEEEecCCc
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGV--HRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~L~~gG~l~~~~~~~~ 123 (201)
.++ ......+++.+ .++|+|||.+++......
T Consensus 134 ~~~----------------~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 134 PFH----------------FNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CSS----------------SCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCC----------------CccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 532 13556778888 678999999998765543
No 51
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.70 E-value=8.5e-17 Score=128.72 Aligned_cols=105 Identities=16% Similarity=0.212 Sum_probs=89.8
Q ss_pred CCcEEEecCCCChhhHHHHhc--CCCeEEEEECCHHHHHHHHHHHhhc--CCCceEEEEcccCCCCCCC------CceeE
Q 028957 1 MTSVLELGCGNSRLSEGLYND--GITAITCIDLSAVAVEKMQERLLLK--GYKEVKVLEADMLDLPFSN------DCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~~~~~~~~~--~~~~i~~~~~d~~~~~~~~------~~~D~ 70 (201)
+.+|||+|||+|..+..+++. ...+|+++|+++.+++.++++.... ..+++.++++|+.+++++. ++||+
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 116 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDM 116 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeE
Confidence 468999999999999999963 2339999999999999999998775 2468999999999887666 79999
Q ss_pred EEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
|++..++|++ +..++++++.++|+|||.+++.++.
T Consensus 117 V~~~~~l~~~----------------~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 117 ITAVECAHWF----------------DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp EEEESCGGGS----------------CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeHhhHHHHh----------------CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999888754 4578999999999999999885544
No 52
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.70 E-value=3.2e-17 Score=126.93 Aligned_cols=109 Identities=16% Similarity=0.186 Sum_probs=88.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC--CCCCCceeEEEe-cccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL--PFSNDCFDVVIE-KATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~v~~-~~~l 77 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.++++....+ .++.++++|+.++ ++++++||+|++ .+.+
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~ 139 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEecCHHHhhcccCCCceEEEEECCccc
Confidence 35899999999999999987665599999999999999999887665 5799999999887 788889999998 4443
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+.- + .+......+++++.++|||||++++.+..
T Consensus 140 ~~~--~---------~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 140 SEE--T---------WHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp BGG--G---------TTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred chh--h---------hhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 110 0 12345678899999999999999977543
No 53
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.70 E-value=1e-16 Score=128.24 Aligned_cols=109 Identities=21% Similarity=0.321 Sum_probs=92.6
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC---CceEEEEcccCCCCCCCCceeEEEec-ccc
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY---KEVKVLEADMLDLPFSNDCFDVVIEK-ATM 77 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~---~~i~~~~~d~~~~~~~~~~~D~v~~~-~~l 77 (201)
.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++....+. .++.++++|+.++++ .++||+|++. .++
T Consensus 84 ~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~ 161 (299)
T 3g2m_A 84 GPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSI 161 (299)
T ss_dssp SCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHH
T ss_pred CcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCccc
Confidence 5899999999999999999876 899999999999999999877652 479999999998876 6889999865 555
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCccc
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHF 125 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~ 125 (201)
|++ ..++..++++++.++|+|||.+++..+.....
T Consensus 162 ~~~-------------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 162 NEL-------------DEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp TTS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred ccC-------------CHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 543 34568899999999999999999988776543
No 54
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.69 E-value=1.1e-16 Score=128.41 Aligned_cols=110 Identities=15% Similarity=0.174 Sum_probs=92.3
Q ss_pred CCcEEEecCCCChhhHHHH-hcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLY-NDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~-~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|..+..++ ...+. +|+++|+++.+++.++++....+.. +++++++|+.+++++ ++||+|+++.++
T Consensus 119 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~ 197 (305)
T 3ocj_A 119 GCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLN 197 (305)
T ss_dssp TCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSG
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChh
Confidence 4689999999999999885 33323 9999999999999999998877643 499999999998877 899999999988
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+++ .......++++++.++|+|||++++.++..+
T Consensus 198 ~~~------------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 231 (305)
T 3ocj_A 198 IYE------------PDDARVTELYRRFWQALKPGGALVTSFLTPP 231 (305)
T ss_dssp GGC------------CCHHHHHHHHHHHHHHEEEEEEEEEECCCCC
T ss_pred hhc------------CCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 876 2335566799999999999999999876544
No 55
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.69 E-value=3.1e-17 Score=129.17 Aligned_cols=109 Identities=23% Similarity=0.274 Sum_probs=86.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC--C---------------------------Cce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG--Y---------------------------KEV 51 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~--~---------------------------~~i 51 (201)
|++|||+|||+|.++..++..+..+|+|+|+|+.+++.+++++.... . .++
T Consensus 56 g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (263)
T 2a14_A 56 GDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAV 135 (263)
T ss_dssp EEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHE
T ss_pred CceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhh
Confidence 35899999999988887777776689999999999999998765431 0 124
Q ss_pred E-EEEcccCCC-CC---CCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 52 K-VLEADMLDL-PF---SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 52 ~-~~~~d~~~~-~~---~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
. ++++|+... ++ ..++||+|+++.++|++. .+.++..+++++++++|||||.+++...
T Consensus 136 ~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~-----------~~~~~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 136 KRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECAC-----------CSLDAYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp EEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC-----------SSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred heEEeccccCCCCCCccccCCCCEeeehHHHHHhc-----------CCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 3 889998873 32 256899999999998752 1346788999999999999999998864
No 56
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.69 E-value=5.2e-17 Score=125.91 Aligned_cols=101 Identities=18% Similarity=0.311 Sum_probs=87.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC--CCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL--PFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++ +.++.+|+.+. ++++++||+|++..+++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~ 112 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLPDKYLDGVMISHFVE 112 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSCTTCBSEEEEESCGG
T ss_pred CCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcCCCCeeEEEECCchh
Confidence 47899999999999999998877 899999999999998764 68888888774 67789999999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++ ..++...+++++.++|||||.+++.++...
T Consensus 113 ~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 144 (240)
T 3dli_A 113 HL-------------DPERLFELLSLCYSKMKYSSYIVIESPNPT 144 (240)
T ss_dssp GS-------------CGGGHHHHHHHHHHHBCTTCCEEEEEECTT
T ss_pred hC-------------CcHHHHHHHHHHHHHcCCCcEEEEEeCCcc
Confidence 87 334678999999999999999998876643
No 57
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.69 E-value=9.8e-17 Score=128.22 Aligned_cols=110 Identities=15% Similarity=0.215 Sum_probs=87.2
Q ss_pred CCcEEEecCCCChhhHHHHhcC-CCeEEEEECCHHHHHHHHHHHhhcCC-------------------------------
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-ITAITCIDLSAVAVEKMQERLLLKGY------------------------------- 48 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~~~~~~~~~~~------------------------------- 48 (201)
+++|||+|||+|.++..++... ..+|+|+|+++.+++.|++++...+.
T Consensus 47 ~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (292)
T 3g07_A 47 GRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCF 126 (292)
T ss_dssp TSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC------------------------------------
T ss_pred CCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccccc
Confidence 4789999999999999999873 34999999999999999987654321
Q ss_pred ---------------------------CceEEEEcccCCCC-----CCCCceeEEEeccccceeeecCCCCCCCCCccHH
Q 028957 49 ---------------------------KEVKVLEADMLDLP-----FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVT 96 (201)
Q Consensus 49 ---------------------------~~i~~~~~d~~~~~-----~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~ 96 (201)
.++.++++|+.... +..++||+|+|..+++++..+ .+.+
T Consensus 127 p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~---------~~~~ 197 (292)
T 3g07_A 127 PASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLN---------WGDE 197 (292)
T ss_dssp ---------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHH---------HHHH
T ss_pred cchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhc---------CCHH
Confidence 37999999987643 457899999999988665111 1345
Q ss_pred HHHHHHHHHhhcccCCcEEEEEe
Q 028957 97 KVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 97 ~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
...+++++++++|+|||.+++..
T Consensus 198 ~~~~~l~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 198 GLKRMFRRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCcEEEEec
Confidence 78899999999999999998753
No 58
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.69 E-value=1.6e-16 Score=126.27 Aligned_cols=104 Identities=23% Similarity=0.298 Sum_probs=91.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++..+ .+|+++|+++.+++.++++....+. +++++++|+.+++++ ++||+|++..+++
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIELN-DKYDIAICHAFLL 100 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCCS-SCEEEEEEESCGG
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCcC-CCeeEEEECChhh
Confidence 46899999999999999988743 3999999999999999999876654 899999999987774 6899999999888
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++ .+..++++++.++|+|||.+++.++.
T Consensus 101 ~~---------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 101 HM---------------TTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp GC---------------SSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cC---------------CCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 76 45679999999999999999988765
No 59
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.69 E-value=3e-16 Score=118.34 Aligned_cols=104 Identities=23% Similarity=0.336 Sum_probs=89.7
Q ss_pred cEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccceeee
Q 028957 3 SVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLFV 82 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~ 82 (201)
+|||+|||+|.++..+++.+. +|+++|+++.+++.++++....+. ++.++++|+..++++.++||+|++... ++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~-- 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDIVADAWEGIVSIFC--HL-- 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSCCTTTCSEEEEECC--CC--
T ss_pred CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCCCcCCccEEEEEhh--cC--
Confidence 899999999999999998876 999999999999999999877664 789999999988877789999998421 11
Q ss_pred cCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 83 NSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+..+..++++++.++|+|||.+++.++...
T Consensus 106 -----------~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 106 -----------PSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp -----------CHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred -----------CHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 346788999999999999999999877644
No 60
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.69 E-value=4.1e-16 Score=117.95 Aligned_cols=103 Identities=16% Similarity=0.099 Sum_probs=87.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.++. +|+++|+++.+++.++++....+.++++++++|+........+||+|++...++
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~- 119 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG- 119 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT-
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc-
Confidence 468999999999999999998743 999999999999999999988777789999999876433346799999866542
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+..++++++.++|+|||++++....
T Consensus 120 -----------------~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 120 -----------------MLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp -----------------CHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred -----------------CHHHHHHHHHHhcCCCeEEEEEecc
Confidence 4578999999999999999987654
No 61
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.69 E-value=7.9e-17 Score=123.65 Aligned_cols=112 Identities=17% Similarity=0.233 Sum_probs=91.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-C--CCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-P--FSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~--~~~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|.++..++...+. .|+|+|+++.+++.++++....+.+++.++++|+..+ + +++++||.|++.
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~-- 112 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLF-- 112 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEE--
T ss_pred CCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEe--
Confidence 358999999999999999988665 8999999999999999999888888999999998874 3 667899999863
Q ss_pred cceeeecCCCCCCCCCccHHH--HHHHHHHHhhcccCCcEEEEEecC
Q 028957 77 MEVLFVNSGDPWNPQPETVTK--VMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+++||.+....... ...+++++.++|||||.+++.+..
T Consensus 113 -------~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 113 -------FPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp -------SCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred -------CCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 34678654332211 136999999999999999987643
No 62
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=1.9e-16 Score=123.71 Aligned_cols=100 Identities=21% Similarity=0.256 Sum_probs=87.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..++...+ .+++++|+++.+++.++++ .+++.++++|+..++ ++++||+|+++.++|+
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~ 107 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK-PAQKADLLYANAVFQW 107 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC-CSSCEEEEEEESCGGG
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC-ccCCcCEEEEeCchhh
Confidence 46899999999999999988732 2899999999999999887 247899999998877 6789999999999887
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+ .+..++++++.++|+|||.+++.++.
T Consensus 108 ~---------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 108 V---------------PDHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp S---------------TTHHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred C---------------CCHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 6 56789999999999999999988754
No 63
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.68 E-value=1e-16 Score=121.73 Aligned_cols=100 Identities=26% Similarity=0.322 Sum_probs=87.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+ +..+++++|+++.+++.++++. +++.++++|+..+++++++||+|++..+++++
T Consensus 37 ~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTC
T ss_pred CCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCCCcEEEEEEcChhhhc
Confidence 468999999999999877 3348999999999999999875 47899999999888888899999999888766
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++..++++++.++|+|||.+++.++...
T Consensus 109 ---------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 136 (211)
T 2gs9_A 109 ---------------EDVERVLLEARRVLRPGGALVVGVLEAL 136 (211)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred ---------------CCHHHHHHHHHHHcCCCCEEEEEecCCc
Confidence 4568999999999999999999887654
No 64
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.68 E-value=5.1e-17 Score=129.39 Aligned_cols=112 Identities=21% Similarity=0.290 Sum_probs=91.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC----CCceEEEEcccCCCC---CCCCceeEEEe
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG----YKEVKVLEADMLDLP---FSNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~----~~~i~~~~~d~~~~~---~~~~~~D~v~~ 73 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.++++..... ..++.+..+|+..++ ++.++||+|++
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 136 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVIC 136 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEE
Confidence 46899999999999999999987 99999999999999998763322 246788999988876 67889999999
Q ss_pred c-cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 74 K-ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 74 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
. .+++++.. + ....++..++++++.++|+|||.+++...+
T Consensus 137 ~g~~l~~~~~----~----~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 137 LGNSFAHLPD----S----KGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp CTTCGGGSCC----S----SSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cChHHhhcCc----c----ccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 8 78887610 0 011356889999999999999999987654
No 65
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.68 E-value=3.5e-16 Score=126.00 Aligned_cols=112 Identities=25% Similarity=0.349 Sum_probs=92.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc-------CCCceEEEEcccCCCC----CC--CCc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK-------GYKEVKVLEADMLDLP----FS--NDC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~-------~~~~i~~~~~d~~~~~----~~--~~~ 67 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.++++.... ...++.++++|+...+ ++ .++
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 114 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMC 114 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCC
T ss_pred CCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCC
Confidence 4689999999999999998765459999999999999999987653 2347899999998865 43 458
Q ss_pred eeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 68 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 68 ~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
||+|+++.++|+++ .+.++...+++++.++|+|||.+++.++...
T Consensus 115 fD~V~~~~~l~~~~-----------~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (313)
T 3bgv_A 115 FDICSCQFVCHYSF-----------ESYEQADMMLRNACERLSPGGYFIGTTPNSF 159 (313)
T ss_dssp EEEEEEETCGGGGG-----------GSHHHHHHHHHHHHTTEEEEEEEEEEEECHH
T ss_pred EEEEEEecchhhcc-----------CCHHHHHHHHHHHHHHhCCCcEEEEecCChH
Confidence 99999999998763 2446778999999999999999998877643
No 66
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=5.1e-17 Score=127.68 Aligned_cols=101 Identities=17% Similarity=0.314 Sum_probs=87.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++. ++.++++|+.++++++++||+|++..++|++
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 107 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALANQGL-FVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLALPDKSVDGVISILAIHHF 107 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHTTTC-EEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCSCTTCBSEEEEESCGGGC
T ss_pred CCEEEEEcCcccHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCCCCCCEeEEEEcchHhhc
Confidence 46899999999999999998665 9999999999988775432 7899999999988888999999999998876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
.+..++++++.++|| ||++++.++..+.
T Consensus 108 ---------------~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~ 135 (261)
T 3ege_A 108 ---------------SHLEKSFQEMQRIIR-DGTIVLLTFDIRL 135 (261)
T ss_dssp ---------------SSHHHHHHHHHHHBC-SSCEEEEEECGGG
T ss_pred ---------------cCHHHHHHHHHHHhC-CcEEEEEEcCCch
Confidence 567899999999999 9998888876443
No 67
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.68 E-value=1.6e-16 Score=125.82 Aligned_cols=100 Identities=24% Similarity=0.405 Sum_probs=87.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.++++. +++.+.++|+..+++ .++||+|++..+++++
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~ 130 (279)
T 3ccf_A 58 GEFILDLGCGTGQLTEKIAQSGA-EVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRV-DKPLDAVFSNAMLHWV 130 (279)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCC-SSCEEEEEEESCGGGC
T ss_pred CCEEEEecCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCc-CCCcCEEEEcchhhhC
Confidence 46899999999999999998655 9999999999999998774 478999999998776 5789999999999876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.+..++++++.++|+|||++++..+..
T Consensus 131 ---------------~d~~~~l~~~~~~LkpgG~l~~~~~~~ 157 (279)
T 3ccf_A 131 ---------------KEPEAAIASIHQALKSGGRFVAEFGGK 157 (279)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred ---------------cCHHHHHHHHHHhcCCCcEEEEEecCC
Confidence 456789999999999999999877654
No 68
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.68 E-value=2.3e-16 Score=125.28 Aligned_cols=105 Identities=17% Similarity=0.265 Sum_probs=89.9
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++. +. +|+++|+++.+++.+++++...+. +++.++.+|+.+++ ++||+|++..+++
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~ 140 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFE 140 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred cCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchh
Confidence 468999999999999999844 55 999999999999999999887663 47999999997764 7899999999887
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
++ ..++...+++++.++|||||.+++.++..
T Consensus 141 ~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 141 HF-------------GHERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp GT-------------CTTTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred hc-------------ChHHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 76 22567899999999999999999877654
No 69
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.68 E-value=4.8e-16 Score=125.30 Aligned_cols=107 Identities=15% Similarity=0.204 Sum_probs=92.3
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++. +. +|+++|+++.+++.++++....+. +++.++++|+.+++ ++||+|++..+++
T Consensus 91 ~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~ 166 (318)
T 2fk8_A 91 GMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFE 166 (318)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGG
T ss_pred cCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHH
Confidence 468999999999999999887 66 999999999999999999887664 46999999998764 7899999999888
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
++ ..++..++++++.++|+|||++++.++..+.
T Consensus 167 ~~-------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 167 HF-------------GHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp GT-------------CGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred hc-------------CHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 76 2357889999999999999999988776543
No 70
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.67 E-value=3.8e-16 Score=124.26 Aligned_cols=100 Identities=16% Similarity=0.162 Sum_probs=83.0
Q ss_pred CCcEEEecCCCChhhHH-HHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEG-LYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~-l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
|++|||+|||+|.++.. +++....+|+++|+++++++.|+++++..+..+++++++|+..++ +++||+|++....
T Consensus 123 g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~~-- 198 (298)
T 3fpf_A 123 GERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAALA-- 198 (298)
T ss_dssp TCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTTC--
T ss_pred cCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCCc--
Confidence 57999999999987654 444322399999999999999999998777778999999998865 6889999975431
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++..++++++.++|||||++++...
T Consensus 199 ----------------~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 199 ----------------EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp ----------------SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred ----------------cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 4567899999999999999998764
No 71
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=3e-16 Score=118.74 Aligned_cols=102 Identities=18% Similarity=0.304 Sum_probs=87.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++++...+..++.++++|+... ..++||+|+++..++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~fD~i~~~~~~~-- 136 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD--VDGKFDLIVANILAE-- 136 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT--CCSCEEEEEEESCHH--
T ss_pred CCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc--CCCCceEEEECCcHH--
Confidence 4689999999999999998876569999999999999999999888776699999998764 358899999876553
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
...++++++.++|+|||++++.++..
T Consensus 137 ----------------~~~~~l~~~~~~L~~gG~l~~~~~~~ 162 (205)
T 3grz_A 137 ----------------ILLDLIPQLDSHLNEDGQVIFSGIDY 162 (205)
T ss_dssp ----------------HHHHHGGGSGGGEEEEEEEEEEEEEG
T ss_pred ----------------HHHHHHHHHHHhcCCCCEEEEEecCc
Confidence 35789999999999999999875543
No 72
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.67 E-value=3.2e-16 Score=121.60 Aligned_cols=111 Identities=18% Similarity=0.273 Sum_probs=83.1
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhh------cCCCceEEEEcccCC-CC--CCCCceeEE
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLL------KGYKEVKVLEADMLD-LP--FSNDCFDVV 71 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~------~~~~~i~~~~~d~~~-~~--~~~~~~D~v 71 (201)
.+|||+|||+|.++..++...+. .|+|+|+++.+++.+++++.. .+.+++.++++|+.. ++ ++.++||.|
T Consensus 48 ~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v 127 (235)
T 3ckk_A 48 VEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKM 127 (235)
T ss_dssp EEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEE
T ss_pred CeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEE
Confidence 47999999999999999988554 899999999999999887653 345789999999986 55 667899998
Q ss_pred EeccccceeeecCCCCCCCCCccHHH--HHHHHHHHhhcccCCcEEEEEecC
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTK--VMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++. +++||.+..++... ...+++++.++|+|||.+++.+..
T Consensus 128 ~~~---------~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 128 FFL---------FPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEE---------SCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEe---------CCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 752 35677654432222 257999999999999999987643
No 73
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.67 E-value=7.7e-16 Score=119.02 Aligned_cols=105 Identities=21% Similarity=0.329 Sum_probs=89.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecc-ccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA-TMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~-~l~~ 79 (201)
+.+|||+|||+|.++..+++. .+++++|+++.+++.++++....+ .++.++++|+.+++++ ++||+|++.. ++++
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 109 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELELP-EPVDAITILCDSLNY 109 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCCS-SCEEEEEECTTGGGG
T ss_pred CCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCCC-CCcCEEEEeCCchhh
Confidence 368999999999999999887 499999999999999999987655 4789999999887765 7899999875 7776
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+ .+.++..++++++.++|+|||.+++...+
T Consensus 110 ~------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 110 L------------QTEADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp C------------CSHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c------------CCHHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 5 24467889999999999999999876544
No 74
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.67 E-value=9.3e-16 Score=114.24 Aligned_cols=107 Identities=18% Similarity=0.343 Sum_probs=90.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCc--eEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE--VKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~--i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+. +++++|+++.+++.+++++...+.++ +.++++|+.+ ..+.++||+|+++..++
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~v~~~~~~~ 130 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADEVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-NVKDRKYNKIITNPPIR 130 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-TCTTSCEEEEEECCCST
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-ccccCCceEEEECCCcc
Confidence 46899999999999999988844 99999999999999999998877666 9999999887 34467899999876654
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+ .......+++++.++|+|||.+++......
T Consensus 131 ~--------------~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 161 (194)
T 1dus_A 131 A--------------GKEVLHRIIEEGKELLKDNGEIWVVIQTKQ 161 (194)
T ss_dssp T--------------CHHHHHHHHHHHHHHEEEEEEEEEEEESTH
T ss_pred c--------------chhHHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 3 236778999999999999999999887653
No 75
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.66 E-value=9.6e-16 Score=119.36 Aligned_cols=104 Identities=22% Similarity=0.396 Sum_probs=87.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccc-cce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKAT-MEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~-l~~ 79 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++....+. ++.++++|+.+++.+ ++||+|++... +++
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~ 118 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAFK-NEFDAVTMFFSTIMY 118 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCCC-SCEEEEEECSSGGGG
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcccC-CCccEEEEcCCchhc
Confidence 36899999999999999999876 999999999999999999877654 789999999987654 68999998643 332
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
. +.++..++++++.++|+|||.+++...
T Consensus 119 ~-------------~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 119 F-------------DEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp S-------------CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-------------CHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 2 346788999999999999999887543
No 76
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.66 E-value=1.7e-16 Score=123.16 Aligned_cols=106 Identities=14% Similarity=0.107 Sum_probs=89.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCC-----CceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-----DCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~~D~v~~~~ 75 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.. ..++.++++|+.+++... ..||+|++..
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~ 132 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENT---AANISYRLLDGLVPEQAAQIHSEIGDANIYMRT 132 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSC---CTTEEEEECCTTCHHHHHHHHHHHCSCEEEEES
T ss_pred CCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCc---ccCceEEECcccccccccccccccCccEEEEcc
Confidence 46899999999999999999888 89999999999999998863 247999999998754221 2489999999
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++|++ ..++..++++++.++|+|||++++.++..+
T Consensus 133 ~~~~~-------------~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 167 (245)
T 3ggd_A 133 GFHHI-------------PVEKRELLGQSLRILLGKQGAMYLIELGTG 167 (245)
T ss_dssp SSTTS-------------CGGGHHHHHHHHHHHHTTTCEEEEEEECTT
T ss_pred hhhcC-------------CHHHHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 98876 335788999999999999999998877643
No 77
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.66 E-value=3.1e-16 Score=129.83 Aligned_cols=105 Identities=22% Similarity=0.326 Sum_probs=90.2
Q ss_pred CCcEEEecCCCChhhHHHHhcC-CC-eEEEEECCHHHHHHHHHHHhhc-----C---CCceEEEEcccCCC------CCC
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-IT-AITCIDLSAVAVEKMQERLLLK-----G---YKEVKVLEADMLDL------PFS 64 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~~-~v~~vD~~~~~~~~~~~~~~~~-----~---~~~i~~~~~d~~~~------~~~ 64 (201)
+.+|||+|||+|.++..+++.. +. +|+++|+++.+++.+++++... + .+++.++++|+.++ +++
T Consensus 84 ~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~ 163 (383)
T 4fsd_A 84 GATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVP 163 (383)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCC
T ss_pred CCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCC
Confidence 4689999999999999998862 33 9999999999999999987543 1 25899999999886 788
Q ss_pred CCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 65 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 65 ~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++||+|+++.+++++ .+..++++++.++|||||++++.+.
T Consensus 164 ~~~fD~V~~~~~l~~~---------------~d~~~~l~~~~r~LkpgG~l~i~~~ 204 (383)
T 4fsd_A 164 DSSVDIVISNCVCNLS---------------TNKLALFKEIHRVLRDGGELYFSDV 204 (383)
T ss_dssp TTCEEEEEEESCGGGC---------------SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEEEEccchhcC---------------CCHHHHHHHHHHHcCCCCEEEEEEe
Confidence 8899999999998876 4568999999999999999998754
No 78
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.66 E-value=1.3e-15 Score=125.32 Aligned_cols=107 Identities=18% Similarity=0.245 Sum_probs=92.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCC--CCCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDL--PFSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~--~~~~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++++...+. ++++++.+|+.+. +++ ++||+|++..+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~v 257 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQF 257 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESC
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEech
Confidence 368999999999999999987655 9999999 9999999999877664 5799999999875 355 78999999999
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+|++ +.++..++++++++.|+|||++++.+...
T Consensus 258 lh~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (363)
T 3dp7_A 258 LDCF-------------SEEEVISILTRVAQSIGKDSKVYIMETLW 290 (363)
T ss_dssp STTS-------------CHHHHHHHHHHHHHHCCTTCEEEEEECCT
T ss_pred hhhC-------------CHHHHHHHHHHHHHhcCCCcEEEEEeecc
Confidence 9876 44677899999999999999999887644
No 79
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.66 E-value=5.7e-16 Score=119.50 Aligned_cols=104 Identities=20% Similarity=0.355 Sum_probs=88.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEec-cccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEK-ATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~-~~l~~ 79 (201)
+.+|||+|||+|.++..+++.+. +++++|+++.+++.++++. +++.++++|+.+++. .++||+|+|. .++++
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGY 113 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC-SSCEEEEEECTTGGGG
T ss_pred CCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc-CCCCcEEEEcCchHhh
Confidence 46899999999999999998877 9999999999999998874 468999999988776 6789999964 47776
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+ .+.++..++++++.++|+|||.+++.++..+
T Consensus 114 ~------------~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (239)
T 3bxo_A 114 L------------KTTEELGAAVASFAEHLEPGGVVVVEPWWFP 145 (239)
T ss_dssp C------------CSHHHHHHHHHHHHHTEEEEEEEEECCCCCT
T ss_pred c------------CCHHHHHHHHHHHHHhcCCCeEEEEEeccCc
Confidence 6 2446788999999999999999998765443
No 80
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.66 E-value=1.6e-15 Score=115.06 Aligned_cols=101 Identities=12% Similarity=0.102 Sum_probs=84.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++....+.+ ++.++++|+.........||+|++...+
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~-- 132 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLAGG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG-- 132 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC--
T ss_pred CCEEEEecCCCCHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc--
Confidence 46899999999999999999844 9999999999999999999888877 8999999998732233579999975432
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+.. +++++.++|+|||++++.....
T Consensus 133 -----------------~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 133 -----------------SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp -----------------CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred -----------------cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 234 9999999999999999877654
No 81
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.66 E-value=5.2e-16 Score=127.05 Aligned_cols=103 Identities=17% Similarity=0.232 Sum_probs=88.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCc-eEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+++|||+|||+|.++..+++.+..+|+++|++ ++++.++++....+.++ +.++++|+.+++++.++||+|++..+.+.
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~ 145 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYC 145 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHTTCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBT
T ss_pred CCEEEEEeccchHHHHHHHHCCCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccccc
Confidence 46899999999999999999976699999999 49999999988877544 99999999998888889999999765554
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
+ ........+++++.++|+|||.++
T Consensus 146 l------------~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 146 L------------FYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp B------------TBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred c------------cCchhHHHHHHHHHHhCCCCCEEc
Confidence 4 133567889999999999999986
No 82
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.66 E-value=1.7e-16 Score=123.09 Aligned_cols=108 Identities=16% Similarity=0.170 Sum_probs=86.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC--CCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL--PFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~v~~~~~l~ 78 (201)
|.+|||||||+|..+..+++..+.+++++|+++.+++.++++....+ .++.++.+|+... ++++++||.|+......
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~ 139 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL 139 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEESCHHHHGGGSCTTCEEEEEECCCCC
T ss_pred CCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCC-CceEEEeehHHhhcccccccCCceEEEeeeec
Confidence 56999999999999999988766699999999999999999887765 4788999998753 46788999998532211
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.. ...+..+...+++++.++|||||+|++..
T Consensus 140 ~~----------~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 140 SE----------ETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp BG----------GGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cc----------chhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 10 00244678899999999999999998753
No 83
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.65 E-value=8.9e-16 Score=115.36 Aligned_cols=115 Identities=17% Similarity=0.206 Sum_probs=89.9
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCC-CCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLP-FSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~-~~~~~~D~v~~~~~ 76 (201)
+++|||+|||+|.++..+++. ++ .+|+++|+++.+++.+++++...+. ++++++++|+..++ ...++||+|+++..
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 102 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLG 102 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEES
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCC
Confidence 468999999999999999887 33 3999999999999999999988775 68999999988764 55688999998654
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+ + ...+.+. .....+..++++++.++|+|||++++..+.
T Consensus 103 ~--~--~~~~~~~--~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 103 Y--L--PSGDHSI--STRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp B--C--TTSCTTC--BCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred c--c--cCccccc--ccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 4 0 0011100 012345678999999999999999988754
No 84
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.65 E-value=1.6e-15 Score=114.90 Aligned_cols=105 Identities=11% Similarity=0.104 Sum_probs=85.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC-CCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++...+.++++++++|+.+ ++...++||+|+++..++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~- 133 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR- 133 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS-
T ss_pred CCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC-
Confidence 468999999999999988888766999999999999999999988877789999999876 444567899999865432
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhh--cccCCcEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHR--VLKPDGLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~L~~gG~l~~~~~~ 121 (201)
......+++.+.+ +|+|||.+++....
T Consensus 134 ---------------~~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 134 ---------------RGLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp ---------------TTTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred ---------------CCcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 1344567777755 59999999877654
No 85
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.65 E-value=1.5e-15 Score=113.24 Aligned_cols=104 Identities=21% Similarity=0.325 Sum_probs=88.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEec-cccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEK-ATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~-~~l~~ 79 (201)
+.+|||+|||+|.++..++..+. +++++|+++.+++.++++. +++.++++|+...+++.++||+|+++ .++++
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 46899999999999999998866 9999999999999998875 36899999999877777899999997 56665
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+ ..++..++++++.++|+|||.+++......
T Consensus 121 ~-------------~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~ 151 (195)
T 3cgg_A 121 L-------------AEDGREPALANIHRALGADGRAVIGFGAGR 151 (195)
T ss_dssp S-------------CHHHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred c-------------ChHHHHHHHHHHHHHhCCCCEEEEEeCCCC
Confidence 4 345678999999999999999998766543
No 86
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.65 E-value=2.1e-15 Score=115.95 Aligned_cols=122 Identities=12% Similarity=0.069 Sum_probs=89.1
Q ss_pred CCcEEEecCC-CChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-CCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCG-NSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-PFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G-~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+||| +|.++..++.....+|+++|+++.+++.+++++...+. +++++++|+..+ +++.++||+|+++..++
T Consensus 56 ~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~~fD~I~~npp~~ 134 (230)
T 3evz_A 56 GEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVVEGTFDVIFSAPPYY 134 (230)
T ss_dssp SCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTCCSCEEEEEECCCCC
T ss_pred CCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcccCceeEEEECCCCc
Confidence 4789999999 99999999988323999999999999999999988876 899999997543 35568999999875543
Q ss_pred eeeec----CCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 79 VLFVN----SGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 79 ~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
..-.. ....|...........++++++.++|+|||++++.....+
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 183 (230)
T 3evz_A 135 DKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE 183 (230)
T ss_dssp ---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH
T ss_pred CCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH
Confidence 32000 0000000111223458899999999999999998765543
No 87
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.65 E-value=1e-15 Score=125.44 Aligned_cols=115 Identities=17% Similarity=0.152 Sum_probs=91.7
Q ss_pred CCcEEEecCCCChhhHHHHhcC-CC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-IT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++.+++..+ +. +++|+|+++.+++.+++++...+++++++.++|+.+++.+...||+|+++..++
T Consensus 204 ~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg 283 (354)
T 3tma_A 204 GMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHG 283 (354)
T ss_dssp TCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSC
T ss_pred CCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCc
Confidence 4689999999999999999875 33 999999999999999999998887789999999998876667799999865543
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.... ..........++++++.++|+|||.+++.+...
T Consensus 284 ~r~~-------~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~~ 320 (354)
T 3tma_A 284 LRLG-------RKEGLFHLYWDFLRGALALLPPGGRVALLTLRP 320 (354)
T ss_dssp C-----------CHHHHHHHHHHHHHHHHTSCTTCEEEEEESCH
T ss_pred CccC-------CcccHHHHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 3210 001112335789999999999999999987654
No 88
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.65 E-value=5e-16 Score=120.58 Aligned_cols=100 Identities=13% Similarity=0.178 Sum_probs=84.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCC---CCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFS---NDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|..+..++..... +|+++|+++.+++.++++....+.++++++++|+.+++.. .++||+|++..+
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~ 150 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARAV 150 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEECC
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEecc
Confidence 468999999999999999864333 9999999999999999998888777899999999876543 578999998542
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.+...+++.+.++|+|||.+++..
T Consensus 151 -------------------~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 151 -------------------ARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp -------------------SCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred -------------------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 346789999999999999998764
No 89
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.65 E-value=8.5e-16 Score=125.34 Aligned_cols=103 Identities=17% Similarity=0.236 Sum_probs=87.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+++|||+|||+|.++..+++.+..+|+++|+++ +++.+++++...+. +++.++++|+.+++++.++||+|++..+.+.
T Consensus 65 ~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 143 (340)
T 2fyt_A 65 DKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYF 143 (340)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTT
T ss_pred CCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhh
Confidence 468999999999999999998766999999996 99999999888775 6899999999988887789999998764333
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
+ .+......++.++.++|+|||.++
T Consensus 144 l------------~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 144 L------------LFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp B------------TTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred c------------cCHHHHHHHHHHHHhhcCCCcEEE
Confidence 3 133567889999999999999987
No 90
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.65 E-value=3.9e-15 Score=112.56 Aligned_cols=100 Identities=17% Similarity=0.176 Sum_probs=84.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..++...+. +++++|+++.+++.++++....+.+++.++++|+.+.+ +.++||+|+++..
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRAF--- 141 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSCS---
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEecc---
Confidence 468999999999999999887433 99999999999999999998887767999999998765 4578999997432
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.....+++++.++|+|||.+++...
T Consensus 142 ----------------~~~~~~l~~~~~~L~~gG~l~~~~~ 166 (207)
T 1jsx_A 142 ----------------ASLNDMVSWCHHLPGEQGRFYALKG 166 (207)
T ss_dssp ----------------SSHHHHHHHHTTSEEEEEEEEEEES
T ss_pred ----------------CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2357899999999999999988754
No 91
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.65 E-value=2.5e-15 Score=110.99 Aligned_cols=108 Identities=15% Similarity=0.215 Sum_probs=85.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCC-CCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLD-LPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~-~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++++...+. +++.++++|+.+ ++...++||+|+++..++
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYA 111 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSH
T ss_pred CCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCC
Confidence 468999999999999999988655999999999999999999987775 379999999876 333346799999865442
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHh--hcccCCcEEEEEecCCcc
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVH--RVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~L~~gG~l~~~~~~~~~ 124 (201)
......+++.+. ++|+|||.+++.......
T Consensus 112 ----------------~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 112 ----------------KETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp ----------------HHHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred ----------------cchHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 234456667776 999999999987765443
No 92
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.64 E-value=1.6e-15 Score=125.50 Aligned_cols=110 Identities=21% Similarity=0.269 Sum_probs=92.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++..++. +++++++|+.+...+.++||+|+++..+|+.
T Consensus 234 ~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~-~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~ 311 (381)
T 3dmg_A 234 GRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANAL-KAQALHSDVDEALTEEARFDIIVTNPPFHVG 311 (381)
T ss_dssp TCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTTSCTTCCEEEEEECCCCCTT
T ss_pred CCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCC-CeEEEEcchhhccccCCCeEEEEECCchhhc
Confidence 36899999999999999999876 999999999999999999988775 4899999998876656899999998877652
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
. ........++++++.++|+|||.++++....
T Consensus 312 ~----------~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 312 G----------AVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp C----------SSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred c----------cccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 0 0123677899999999999999999876543
No 93
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.64 E-value=4.9e-16 Score=121.62 Aligned_cols=109 Identities=16% Similarity=0.232 Sum_probs=88.9
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-----------------------------Cce-
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-----------------------------KEV- 51 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-----------------------------~~i- 51 (201)
.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++...+. .++
T Consensus 58 ~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~ 137 (265)
T 2i62_A 58 ELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIK 137 (265)
T ss_dssp EEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEE
T ss_pred CEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhhe
Confidence 58999999999999998887666899999999999999988765320 127
Q ss_pred EEEEcccCCCC-CCC---CceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 52 KVLEADMLDLP-FSN---DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 52 ~~~~~d~~~~~-~~~---~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.++++|+.+.. ++. ++||+|++..++|++. .+..+..++++++.++|+|||.+++.+..
T Consensus 138 ~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~-----------~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 138 QVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAAC-----------PDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp EEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHC-----------SSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred eEEEeeeccCCCCCccccCCccEEEEhhhhhhhc-----------CChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 89999998754 244 7899999999998551 13367889999999999999999987643
No 94
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.64 E-value=1.7e-15 Score=114.87 Aligned_cols=99 Identities=16% Similarity=0.100 Sum_probs=85.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++...+.+++.++.+|+.......++||+|++..+++++
T Consensus 78 ~~~vLdiG~G~G~~~~~la~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 156 (210)
T 3lbf_A 78 QSRVLEIGTGSGYQTAILAHLVQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEI 156 (210)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhhh
Confidence 46899999999999999998854 99999999999999999998888778999999998765556789999998887665
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
. +++.+.|+|||++++....
T Consensus 157 ---------------~------~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 157 ---------------P------TALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ---------------C------THHHHTEEEEEEEEEEECS
T ss_pred ---------------h------HHHHHhcccCcEEEEEEcC
Confidence 1 1578999999999987654
No 95
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.64 E-value=3.3e-15 Score=121.22 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=91.1
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++++...+. ++++++.+|+. .+.+. +||+|++.+++|+
T Consensus 171 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~ 247 (332)
T 3i53_A 171 GHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVLHD 247 (332)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCGGG
T ss_pred CEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhhcc
Confidence 58999999999999999987655 8999999 9999999999887664 57999999997 35544 8999999999987
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+ ..++..++++++++.|+|||++++.+...+
T Consensus 248 ~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 278 (332)
T 3i53_A 248 W-------------DDLSAVAILRRCAEAAGSGGVVLVIEAVAG 278 (332)
T ss_dssp S-------------CHHHHHHHHHHHHHHHTTTCEEEEEECCCC
T ss_pred C-------------CHHHHHHHHHHHHHhcCCCCEEEEEeecCC
Confidence 6 345678999999999999999999876544
No 96
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.63 E-value=1.2e-15 Score=119.88 Aligned_cols=99 Identities=19% Similarity=0.271 Sum_probs=79.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC-----CCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF-----SNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-----~~~~~D~v~~~~ 75 (201)
+.+|||+|||+|.++..+++.+. +|+++|+|+.|++.++++.... .++.++.++.. ..++||+|+++.
T Consensus 46 g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~~~~~~~~~fD~Vv~~~ 118 (261)
T 3iv6_A 46 GSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAEIPKELAGHFDFVLNDR 118 (261)
T ss_dssp TCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSCCCGGGTTCCSEEEEES
T ss_pred cCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhc------cceeeeeecccccccccCCCccEEEEhh
Confidence 46899999999999999999877 9999999999999999987543 23333333322 146899999999
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++|++ ..++...+++++.++| |||++++...
T Consensus 119 ~l~~~-------------~~~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 119 LINRF-------------TTEEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp CGGGS-------------CHHHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred hhHhC-------------CHHHHHHHHHHHHHhC-cCcEEEEEec
Confidence 88876 3467788999999999 9999987643
No 97
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.63 E-value=1.2e-15 Score=119.36 Aligned_cols=101 Identities=16% Similarity=0.148 Sum_probs=85.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCC---CCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFS---NDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|..+..++...+. +|+++|+++.+++.++++....+..+++++++|+.+++.. .++||+|++..+
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~ 160 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV 160 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS
T ss_pred CCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc
Confidence 468999999999999999887444 9999999999999999999988877899999999876532 478999998543
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.+...+++.+.++|+|||++++...
T Consensus 161 -------------------~~~~~ll~~~~~~LkpgG~l~~~~g 185 (249)
T 3g89_A 161 -------------------APLCVLSELLLPFLEVGGAAVAMKG 185 (249)
T ss_dssp -------------------CCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred -------------------CCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2346899999999999999887653
No 98
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.62 E-value=1e-14 Score=112.24 Aligned_cols=141 Identities=14% Similarity=0.103 Sum_probs=103.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
|.+|+|+|||+|.++..++..++. +|+++|+++.+++.|++++..+++. ++.+.++|+.....+..+||+|+..+.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGm-- 99 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGM-- 99 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE--
T ss_pred CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCC--
Confidence 468999999999999999998765 8999999999999999999988864 599999999875444347999875433
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcccccccccCCCCceEEEEEEeCCeeeEEEEEEEeC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEWITFGDGFHYFFYILRKG 158 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (201)
....+..+++...+.|+++|++++...........++...++....+.-...++..|-.....++
T Consensus 100 ---------------Gg~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~~ 164 (230)
T 3lec_A 100 ---------------GGRLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLAANDFEIVAEDILTENDKRYEILVVKHG 164 (230)
T ss_dssp ---------------CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEEC
T ss_pred ---------------chHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 22457889999999999999999877655443334444444443333333445555555555555
No 99
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.62 E-value=2.7e-15 Score=110.63 Aligned_cols=103 Identities=11% Similarity=0.195 Sum_probs=83.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCC-CCCCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLD-LPFSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~-~~~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|.++..++...+. +|+++|+++.+++.+++++...+.+ ++ ++.+|+.. ++...++||+|++...+
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~ 104 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGL 104 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-T
T ss_pred CCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCcc
Confidence 358999999999999999888533 9999999999999999999887766 78 88888754 33222789999987665
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++ ..+++++.++|+|||++++.....+
T Consensus 105 ~~-------------------~~~l~~~~~~L~~gG~l~~~~~~~~ 131 (178)
T 3hm2_A 105 TA-------------------PGVFAAAWKRLPVGGRLVANAVTVE 131 (178)
T ss_dssp TC-------------------TTHHHHHHHTCCTTCEEEEEECSHH
T ss_pred cH-------------------HHHHHHHHHhcCCCCEEEEEeeccc
Confidence 32 4689999999999999998776543
No 100
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.62 E-value=3.6e-15 Score=110.77 Aligned_cols=108 Identities=16% Similarity=0.229 Sum_probs=85.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCC----CCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLP----FSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~----~~~~~~D~v~~~~ 75 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++...+. ++++++++|+.+.. ...++||+|+++.
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~ 124 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDP 124 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECC
Confidence 468999999999999998887655999999999999999999887764 47999999987632 1257899999876
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHH--hhcccCCcEEEEEecCCcc
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGV--HRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~L~~gG~l~~~~~~~~~ 124 (201)
.++. ......++.+ .++|+|||.+++.......
T Consensus 125 ~~~~----------------~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 159 (187)
T 2fhp_A 125 PYAK----------------QEIVSQLEKMLERQLLTNEAVIVCETDKTVK 159 (187)
T ss_dssp CGGG----------------CCHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred CCCc----------------hhHHHHHHHHHHhcccCCCCEEEEEeCCccc
Confidence 5431 2234555556 8899999999987765544
No 101
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.62 E-value=1.6e-15 Score=118.90 Aligned_cols=101 Identities=30% Similarity=0.419 Sum_probs=84.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++.. . .++++|+..++++.++||+|++..++.++
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~----~--~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGV----K--NVVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTC----S--CEEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcC----C--CEEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 46899999999999999998876 89999999999999988753 1 28899998888878899999997655433
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
. .+..++++++.++|+|||.+++..++.
T Consensus 128 ~--------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 128 V--------------ENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp C--------------SCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred c--------------ccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 1 337899999999999999999877653
No 102
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.62 E-value=9.4e-16 Score=117.07 Aligned_cols=101 Identities=20% Similarity=0.330 Sum_probs=83.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC---CCC-CCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL---PFS-NDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~-~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++ .++.+...|+.++ +.. ..+||+|++..+
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPVGKDYDLICANFA 125 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred CCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh------cccccchhhHHhhcccccccCCCccEEEECch
Confidence 46899999999999999999876 999999999999999876 3667888887765 433 345999999888
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
++ . .+..++++++.++|+|||.+++.++....
T Consensus 126 l~-~---------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 126 LL-H---------------QDIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp CC-S---------------SCCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred hh-h---------------hhHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 86 3 34578999999999999999998876543
No 103
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.62 E-value=1.7e-15 Score=125.12 Aligned_cols=104 Identities=18% Similarity=0.269 Sum_probs=88.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+++|||+|||+|.++..+++.+..+|+++|++ .+++.+++++...+.. ++.++++|+.+++++ ++||+|++....+.
T Consensus 64 ~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~ 141 (376)
T 3r0q_C 64 GKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYF 141 (376)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTT
T ss_pred CCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhhc
Confidence 47899999999999999999977799999999 9999999998887753 499999999988776 88999999765555
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
+ .+......+++.+.++|+|||.+++.
T Consensus 142 l------------~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 142 L------------LRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp B------------TTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred c------------cchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 4 12245778999999999999998753
No 104
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.62 E-value=1.5e-15 Score=120.94 Aligned_cols=108 Identities=16% Similarity=0.243 Sum_probs=80.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC--------------C----------------Cc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG--------------Y----------------KE 50 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~--------------~----------------~~ 50 (201)
+.+|||+|||+|..+..++.....+|+++|+++.+++.+++++.... . ..
T Consensus 72 ~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 151 (289)
T 2g72_A 72 GRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARV 151 (289)
T ss_dssp CSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHE
T ss_pred CCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhh
Confidence 46899999999996554444333499999999999999988654211 0 01
Q ss_pred eEEEEcccCC-CCC-----CCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 51 VKVLEADMLD-LPF-----SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 51 i~~~~~d~~~-~~~-----~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
+.++.+|+.. +++ +.++||+|+++.+++++. ...++..++++++.++|||||++++..
T Consensus 152 ~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~-----------~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 152 KRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVS-----------PDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp EEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHC-----------SSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ceEEecccCCCCCccccccCCCCCCEEEehhhhhhhc-----------CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 4677778877 443 346799999999998741 113678999999999999999999864
No 105
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.62 E-value=8e-16 Score=122.77 Aligned_cols=106 Identities=14% Similarity=0.184 Sum_probs=80.4
Q ss_pred CcEEEecCCCChhhHHHH----hcCCC-eE--EEEECCHHHHHHHHHHHhhc-CCCceEE--EEcccCCCC------CCC
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGIT-AI--TCIDLSAVAVEKMQERLLLK-GYKEVKV--LEADMLDLP------FSN 65 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~-~v--~~vD~~~~~~~~~~~~~~~~-~~~~i~~--~~~d~~~~~------~~~ 65 (201)
.+|||+|||+|.++..++ ...+. .+ +++|+|++|++.++++.... +.+++.+ ..+++..++ +++
T Consensus 54 ~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 133 (292)
T 2aot_A 54 IKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKEL 133 (292)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCC
T ss_pred CeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCC
Confidence 479999999998765432 32222 33 99999999999999987653 3455554 455554332 457
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
++||+|++..++|++ ++..+++++++++|||||++++.....
T Consensus 134 ~~fD~V~~~~~l~~~---------------~d~~~~l~~~~r~LkpgG~l~i~~~~~ 175 (292)
T 2aot_A 134 QKWDFIHMIQMLYYV---------------KDIPATLKFFHSLLGTNAKMLIIVVSG 175 (292)
T ss_dssp CCEEEEEEESCGGGC---------------SCHHHHHHHHHHTEEEEEEEEEEEECT
T ss_pred CceeEEEEeeeeeec---------------CCHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 899999999999887 567899999999999999999876543
No 106
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.62 E-value=9.8e-16 Score=114.00 Aligned_cols=133 Identities=14% Similarity=0.215 Sum_probs=98.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..++...+. +|+++|+|+.|++.+++++...+.. ++.+ .|.... .+.++||+|++..++|
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~-~~~~~~DvVLa~k~LH 126 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESD-VYKGTYDVVFLLKMLP 126 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHH-HTTSEEEEEEEETCHH
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--eccccc-CCCCCcChhhHhhHHH
Confidence 468999999999999999888554 9999999999999999999988865 4555 555443 3468899999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe---cCCcc------ccccccc-CCCCceEEEEEEeCCee
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS---FGQPH------FRRPFFN-APQFTWSVEWITFGDGF 148 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~---~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~ 148 (201)
++ ++.+..+.++.+.|+|||.++-.. ...+. ....+.. .....|.......++.+
T Consensus 127 lL---------------~~~~~al~~v~~~L~pggvfISfptksl~Gr~~gm~~~Y~~~~~~~~~~~~~~~~~~~~~nEl 191 (200)
T 3fzg_A 127 VL---------------KQQDVNILDFLQLFHTQNFVISFPIKSLSGKEKGMEENYQLWFESFTKGWIKILDSKVIGNEL 191 (200)
T ss_dssp HH---------------HHTTCCHHHHHHTCEEEEEEEEEECCCCC--CTTCCCCHHHHHHHHTTTTSCEEEEEEETTEE
T ss_pred hh---------------hhhHHHHHHHHHHhCCCCEEEEeChHHhcCCCcchhhhHHHHHHHhccCcceeeeeeeeCceE
Confidence 77 566677779999999999877543 11111 1111111 24556888888888877
Q ss_pred eEE
Q 028957 149 HYF 151 (201)
Q Consensus 149 ~~~ 151 (201)
.|.
T Consensus 192 ~y~ 194 (200)
T 3fzg_A 192 VYI 194 (200)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 107
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.61 E-value=4.6e-15 Score=120.26 Aligned_cols=108 Identities=15% Similarity=0.268 Sum_probs=91.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++..+. +++++|++ .+++.+++++...+.. +++++.+|+.+.+++. .||+|++..++|
T Consensus 166 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~v~~~~~l~ 243 (335)
T 2r3s_A 166 PLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGN-DYDLVLLPNFLH 243 (335)
T ss_dssp CSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCS-CEEEEEEESCGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCC-CCcEEEEcchhc
Confidence 368999999999999999988544 99999999 9999999998776643 6999999998766654 499999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++ ..++..++++++.++|+|||++++.+...+
T Consensus 244 ~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 275 (335)
T 2r3s_A 244 HF-------------DVATCEQLLRKIKTALAVEGKVIVFDFIPN 275 (335)
T ss_dssp GS-------------CHHHHHHHHHHHHHHEEEEEEEEEEECCCC
T ss_pred cC-------------CHHHHHHHHHHHHHhCCCCcEEEEEeecCC
Confidence 76 346778999999999999999998876544
No 108
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.61 E-value=1.9e-15 Score=119.08 Aligned_cols=108 Identities=19% Similarity=0.200 Sum_probs=87.6
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHH------HHHHHHHHHhhcCC-CceEEEEcc---cCCCCCCCCce
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAV------AVEKMQERLLLKGY-KEVKVLEAD---MLDLPFSNDCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~------~~~~~~~~~~~~~~-~~i~~~~~d---~~~~~~~~~~~ 68 (201)
+.+|||+|||+|.++..+++. ++ .+|+++|+++. +++.+++++...+. +++.++++| ...++++.++|
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~f 123 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHF 123 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCC
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCE
Confidence 468999999999999999988 44 39999999997 99999999887664 579999998 33445667899
Q ss_pred eEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 69 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
|+|++..+++++ .+...+++.+.++++|||++++.++..+
T Consensus 124 D~v~~~~~l~~~---------------~~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 124 DRVVLAHSLWYF---------------ASANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp SEEEEESCGGGS---------------SCHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred EEEEEccchhhC---------------CCHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 999999998876 2334577777777788999999876643
No 109
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.61 E-value=1.8e-15 Score=117.89 Aligned_cols=109 Identities=19% Similarity=0.364 Sum_probs=84.7
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhc--------CCCceEEEEcccCC-CC--CCCCcee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLK--------GYKEVKVLEADMLD-LP--FSNDCFD 69 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~--------~~~~i~~~~~d~~~-~~--~~~~~~D 69 (201)
.+|||+|||+|.++..++..++. .|+|+|+++.+++.+++++... +.+++.++++|+.+ ++ ++.+++|
T Consensus 51 ~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d 130 (246)
T 2vdv_E 51 VTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLS 130 (246)
T ss_dssp EEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEE
T ss_pred CEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccC
Confidence 57999999999999999998765 8999999999999999987765 56789999999986 44 6677888
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHH--HHHHHHHHhhcccCCcEEEEEe
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTK--VMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.|+.. +++||.+....... ...+++++.++|+|||.+++.+
T Consensus 131 ~v~~~---------~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 131 KMFFC---------FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEE---------SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEE---------CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 88742 24677543322111 1589999999999999999865
No 110
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.61 E-value=6.1e-15 Score=130.23 Aligned_cols=107 Identities=18% Similarity=0.316 Sum_probs=90.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhc------CCCceEEEEcccCCCCCCCCceeEEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLK------GYKEVKVLEADMLDLPFSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~------~~~~i~~~~~d~~~~~~~~~~~D~v~ 72 (201)
+.+|||+|||+|.++..+++.+. .+|+|+|+++.+++.|++++... +.+++.++++|+..+++..++||+|+
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV 801 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGT 801 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEE
Confidence 46899999999999999999873 39999999999999999876532 45689999999999888889999999
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+..+++++ .......+++++.++|+|| .+++.+++
T Consensus 802 ~~eVLeHL-------------~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 802 CLEVIEHM-------------EEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp EESCGGGS-------------CHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred EeCchhhC-------------ChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 99999887 3345668999999999998 76666543
No 111
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.61 E-value=5e-15 Score=116.22 Aligned_cols=120 Identities=12% Similarity=0.143 Sum_probs=87.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCC--CCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLP--FSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~--~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.+++++...+.. +++++++|+.+.. ++.++||+|+++..+
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy 129 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPY 129 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC
T ss_pred CCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCC
Confidence 4689999999999999999886669999999999999999999887754 6999999998764 456899999997554
Q ss_pred ceee-ecCCCCCCC----CCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 78 EVLF-VNSGDPWNP----QPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 78 ~~~~-~~~~~~~~~----~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
...- .....|... .-........+++.+.++|+|||+++++..
T Consensus 130 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 177 (259)
T 3lpm_A 130 FATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR 177 (259)
T ss_dssp -----------------------HHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc
Confidence 2210 000000000 000113467899999999999999998653
No 112
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.61 E-value=1.2e-14 Score=112.75 Aligned_cols=141 Identities=13% Similarity=0.084 Sum_probs=102.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
|.+|||+|||+|.++..++..++. +|+++|+++.+++.|++++..+++. ++.+.++|+.....+..+||+|+..+.
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm-- 99 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM-- 99 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE--
T ss_pred CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC--
Confidence 468999999999999999998765 8999999999999999999988864 599999999875433335999886432
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcccccccccCCCCceEEEEEEeCCeeeEEEEEEEeC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEWITFGDGFHYFFYILRKG 158 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (201)
..+.+..+++...+.|+++|++++............+...++....+.....++..|......++
T Consensus 100 ---------------Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~~~ 164 (244)
T 3gnl_A 100 ---------------GGTLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLAPS 164 (244)
T ss_dssp ---------------CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEEEC
T ss_pred ---------------chHHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEeC
Confidence 22557889999999999999999876554333333444444433333333445555555555554
No 113
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.61 E-value=1.8e-14 Score=110.61 Aligned_cols=141 Identities=16% Similarity=0.148 Sum_probs=101.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCC-ceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSND-CFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~-~~D~v~~~~~l 77 (201)
|.+|||+|||+|.++..++..++. +|+++|+++.+++.|++++..+++. ++.+..+|+.. +++.+ +||+|+..+.
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-~l~~~~~~D~IviaG~- 93 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAGM- 93 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-GCCGGGCCCEEEEEEE-
T ss_pred CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-hcccCcCCCEEEEcCC-
Confidence 468999999999999999998765 8999999999999999999998865 59999999865 23333 6998886432
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcccccccccCCCCceEEEEEEeCCeeeEEEEEEEe
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPHFRRPFFNAPQFTWSVEWITFGDGFHYFFYILRK 157 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (201)
....+..+++...+.|+++|++++............+...++....+.-...++..|-.....+
T Consensus 94 ----------------Gg~~i~~Il~~~~~~L~~~~~lVlq~~~~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~~ 157 (225)
T 3kr9_A 94 ----------------GGRLIARILEEGLGKLANVERLILQPNNREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVEA 157 (225)
T ss_dssp ----------------CHHHHHHHHHHTGGGCTTCCEEEEEESSCHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ----------------ChHHHHHHHHHHHHHhCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEe
Confidence 2244688999999999999999886654433333344444443333333334555555555555
Q ss_pred CC
Q 028957 158 GK 159 (201)
Q Consensus 158 ~~ 159 (201)
|.
T Consensus 158 ~~ 159 (225)
T 3kr9_A 158 GQ 159 (225)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 114
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.61 E-value=3.6e-15 Score=121.02 Aligned_cols=103 Identities=22% Similarity=0.321 Sum_probs=87.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+++|||+|||+|.++..+++.+..+|+++|++ .+++.+++++..++. +++.++.+|+.+++++.++||+|++....+.
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~ 117 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYF 117 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTT
T ss_pred CCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhh
Confidence 46899999999999999999876699999999 589999999887775 4699999999988777789999999765554
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
+ .+......++.++.++|+|||.++
T Consensus 118 l------------~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 118 L------------LYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp B------------STTCCHHHHHHHHHHHEEEEEEEE
T ss_pred c------------ccHHHHHHHHHHHHhhcCCCeEEE
Confidence 4 123456789999999999999987
No 115
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.61 E-value=1.1e-14 Score=120.01 Aligned_cols=107 Identities=17% Similarity=0.245 Sum_probs=91.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++++...+. ++++++.+|+. .+++. .||+|++..++|
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh 279 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVLH 279 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCGG
T ss_pred CcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhhc
Confidence 368999999999999999988655 9999999 9999999999887663 57999999998 35554 799999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++ ..+...++++++++.|+|||++++.+...+
T Consensus 280 ~~-------------~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 280 DW-------------DDDDVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp GS-------------CHHHHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred cC-------------CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 76 445667999999999999999999876543
No 116
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.61 E-value=9.7e-15 Score=119.72 Aligned_cols=107 Identities=13% Similarity=0.203 Sum_probs=91.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++++...+.+ +++++.+|+.+.+++. +|+|++..++|
T Consensus 191 ~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~D~v~~~~vlh 267 (359)
T 1x19_A 191 VKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE--ADAVLFCRILY 267 (359)
T ss_dssp CCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC--CSEEEEESCGG
T ss_pred CCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC--CCEEEEechhc
Confidence 468999999999999999988654 9999999 99999999998876644 5999999998876553 39999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++ ..+...++++++.++|+|||++++.+...+
T Consensus 268 ~~-------------~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 268 SA-------------NEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp GS-------------CHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred cC-------------CHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 76 335688999999999999999988876543
No 117
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.60 E-value=6.1e-15 Score=116.85 Aligned_cols=106 Identities=15% Similarity=0.185 Sum_probs=86.7
Q ss_pred CcEEEecCCC---ChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----------CCCC
Q 028957 2 TSVLELGCGN---SRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----------FSND 66 (201)
Q Consensus 2 ~~vLDlG~G~---G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----------~~~~ 66 (201)
.+|||||||+ |.++..+.+..+. +|+++|+|+.|++.+++++... +++.++++|+.+.. ++..
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~--~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKD--PNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTC--TTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCC--CCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 5899999999 9887766665443 9999999999999999988543 47999999997521 3335
Q ss_pred ceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 67 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 67 ~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+||+|++..++|++ ..++..++++++.++|+|||++++.+...
T Consensus 157 ~~d~v~~~~vlh~~-------------~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 157 RPAAIMLVGMLHYL-------------SPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp SCCEEEETTTGGGS-------------CTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCEEEEEechhhhC-------------CcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 89999999999987 22357899999999999999999887664
No 118
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.60 E-value=1.7e-15 Score=120.24 Aligned_cols=102 Identities=13% Similarity=0.135 Sum_probs=86.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCc-eEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
|.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++++..++..+ ++++++|+.+... .++||+|+++..
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p--- 201 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV--- 201 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC---
T ss_pred CCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc---
Confidence 57899999999999999999877579999999999999999998887654 8999999998765 678999997422
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.....+++++.++|+|||.+++.++..
T Consensus 202 ----------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 202 ----------------VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp ----------------SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ----------------hhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 122568889999999999999887763
No 119
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.60 E-value=4.3e-15 Score=113.60 Aligned_cols=99 Identities=26% Similarity=0.457 Sum_probs=84.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC--CCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD--LPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+ .+++++|+++.+++.++++. .+++++|+.. .++++++||+|++..+++
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~ 104 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYEEEQFDCVIFGDVLE 104 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSCTTCEEEEEEESCGG
T ss_pred CCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCCCCccCEEEECChhh
Confidence 4689999999999999999885 49999999999999887653 3788899876 456678999999998887
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
++ .+...+++++.++|+|||.+++..+..
T Consensus 105 ~~---------------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 133 (230)
T 3cc8_A 105 HL---------------FDPWAVIEKVKPYIKQNGVILASIPNV 133 (230)
T ss_dssp GS---------------SCHHHHHHHTGGGEEEEEEEEEEEECT
T ss_pred hc---------------CCHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence 76 345789999999999999999887654
No 120
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.60 E-value=3.6e-15 Score=114.03 Aligned_cols=95 Identities=23% Similarity=0.317 Sum_probs=82.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++.. +++|+++.+++.++++ ++.++++|+..++++.++||+|++..+++++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 115 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR-------GVFVLKGTAENLPLKDESFDFALMVTTICFV 115 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT-------TCEEEECBTTBCCSCTTCEEEEEEESCGGGS
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc-------CCEEEEcccccCCCCCCCeeEEEEcchHhhc
Confidence 478999999999999888654 9999999999999875 5789999998888777899999999888765
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.+..++++++.++|+|||.+++.....
T Consensus 116 ---------------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 142 (219)
T 1vlm_A 116 ---------------DDPERALKEAYRILKKGGYLIVGIVDR 142 (219)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred ---------------cCHHHHHHHHHHHcCCCcEEEEEEeCC
Confidence 456789999999999999999887654
No 121
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.60 E-value=9.7e-15 Score=120.15 Aligned_cols=104 Identities=24% Similarity=0.363 Sum_probs=88.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++++...+.. +++++.+|+.+ +++. .||+|++..++|
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~ 259 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLPV-TADVVLLSFVLL 259 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSC-CEEEEEEESCGG
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCCC-CCCEEEEecccc
Confidence 468999999999999999988654 9999999 99999999998877653 79999999876 3443 499999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++ ..+...++++++.++|+|||++++.+.
T Consensus 260 ~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 260 NW-------------SDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp GS-------------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CC-------------CHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 75 334567999999999999999998876
No 122
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.60 E-value=7.9e-15 Score=111.82 Aligned_cols=99 Identities=17% Similarity=0.149 Sum_probs=77.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC----CCCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL----PFSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~~D~v~~~~ 75 (201)
|.+|||+|||+|.++..+++... .+|+|+|+++.+++.+.+..... +++.++.+|+... ++. ++||+|+++.
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~ 134 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIV-EKVDLIYQDI 134 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTC-CCEEEEEECC
T ss_pred CCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccc-cceeEEEEec
Confidence 46899999999999999988742 39999999999887776655443 4788888998763 343 7899999862
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
. .......+++++.++|||||++++..
T Consensus 135 ~-----------------~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 135 A-----------------QKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp C-----------------STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-----------------ChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 1 11344567999999999999999874
No 123
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.59 E-value=5.3e-15 Score=109.93 Aligned_cols=102 Identities=19% Similarity=0.312 Sum_probs=85.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCC-CceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSN-DCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~-~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..++..+ .+|+++|+++.+++.+++++...+. +++.+.++|+.. .++. ++||+|++...++
T Consensus 34 ~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~ 111 (192)
T 1l3i_A 34 NDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGSGG 111 (192)
T ss_dssp TCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCCTT
T ss_pred CCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCchH
Confidence 4689999999999999999888 5999999999999999999887775 689999999876 2222 5899999876543
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
....+++++.++|+|||.+++..+..
T Consensus 112 ------------------~~~~~l~~~~~~l~~gG~l~~~~~~~ 137 (192)
T 1l3i_A 112 ------------------ELQEILRIIKDKLKPGGRIIVTAILL 137 (192)
T ss_dssp ------------------CHHHHHHHHHHTEEEEEEEEEEECBH
T ss_pred ------------------HHHHHHHHHHHhcCCCcEEEEEecCc
Confidence 34789999999999999999877643
No 124
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.59 E-value=7.7e-15 Score=121.14 Aligned_cols=111 Identities=18% Similarity=0.215 Sum_probs=88.4
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC---ceEEEEcccCCCCCCCCceeEEEecccc
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK---EVKVLEADMLDLPFSNDCFDVVIEKATM 77 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~---~i~~~~~d~~~~~~~~~~~D~v~~~~~l 77 (201)
.+|||+|||+|.++..+++.++. +|+++|+++.+++.+++++..++.. +++++.+|+.+ +++.++||+|+++..+
T Consensus 224 ~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppf 302 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPF 302 (375)
T ss_dssp SEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCCC
T ss_pred CeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCCc
Confidence 68999999999999999998644 9999999999999999999887643 58889999887 4566799999998887
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
|... +. ......++++++.++|+|||+++++.....
T Consensus 303 h~~~------~~----~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 303 HQQH------AL----TDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp -----------------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred ccCc------cc----CHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 6430 00 112345799999999999999998765543
No 125
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.59 E-value=1.7e-16 Score=123.00 Aligned_cols=101 Identities=20% Similarity=0.215 Sum_probs=84.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.+++++...++ +++.++++|+.+.+ +.++||+|+++..+++
T Consensus 79 ~~~vLD~gcG~G~~~~~la~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~ 156 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFALTGM-RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGG 156 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSS
T ss_pred CCEEEECccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCC
Confidence 46899999999999999999875 999999999999999999988876 58999999998765 4578999999877765
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
. ......+.++.++|+|||.+++.
T Consensus 157 ~---------------~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 157 P---------------DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp G---------------GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred c---------------chhhhHHHHHHhhcCCcceeHHH
Confidence 4 23333666788999999986643
No 126
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.59 E-value=9.3e-15 Score=119.40 Aligned_cols=108 Identities=15% Similarity=0.272 Sum_probs=91.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCC-CCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLP-FSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~-~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|.++..+++..+. +++++|+ +.+++.++++....+. ++++++.+|+.+.+ +..+.||+|++..++
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 468999999999999999988655 9999999 8899999998877664 46999999998765 134669999999999
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
|++ ..++..++++++++.|+|||++++.+...
T Consensus 259 h~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 290 (352)
T 3mcz_A 259 HYF-------------DAREAREVIGHAAGLVKPGGALLILTMTM 290 (352)
T ss_dssp GGS-------------CHHHHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred ccC-------------CHHHHHHHHHHHHHHcCCCCEEEEEEecc
Confidence 876 44567899999999999999999887543
No 127
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.58 E-value=1e-14 Score=119.36 Aligned_cols=102 Identities=18% Similarity=0.294 Sum_probs=85.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+++|||+|||+|.++..+++.+..+|+++|+++ +++.++++++..+. ++++++.+|+.+++++ ++||+|++...+++
T Consensus 51 ~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~ 128 (348)
T 2y1w_A 51 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYM 128 (348)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTT
T ss_pred cCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhc
Confidence 468999999999999999988766999999996 88999998887775 6799999999887655 68999999877665
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 117 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 117 (201)
+ ..+.....+.++.+.|+|||.+++
T Consensus 129 ~-------------~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 129 L-------------FNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp B-------------TTTSHHHHHHHGGGGEEEEEEEES
T ss_pred C-------------ChHHHHHHHHHHHhhcCCCeEEEE
Confidence 5 124456778889999999999884
No 128
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.58 E-value=1.6e-14 Score=111.48 Aligned_cols=100 Identities=9% Similarity=0.104 Sum_probs=81.7
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC---CCCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL---PFSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~~~~D~v~~~~ 75 (201)
|++|||+|||+|.++..++.. |+. +|+++|+++++++.++++.... +++..+.+|+... +....++|+|++..
T Consensus 78 G~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~ 155 (233)
T 4df3_A 78 GDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARFPEKYRHLVEGVDGLYADV 155 (233)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccCccccccccceEEEEEEec
Confidence 689999999999999999987 665 9999999999999998887654 4899999988753 34567899888532
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
. ...+...++.++.+.|||||++++..
T Consensus 156 ~-----------------~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 156 A-----------------QPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp C-----------------CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred c-----------------CChhHHHHHHHHHHhccCCCEEEEEE
Confidence 1 12456789999999999999988764
No 129
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.58 E-value=7.7e-15 Score=113.37 Aligned_cols=100 Identities=18% Similarity=0.309 Sum_probs=83.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCC-C-CCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL-P-FSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~-~-~~~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|..+..++...+. +|+++|+++.+++.+++++...+.. ++.++++|+... + ...++||+|++...
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~ 151 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDAA 151 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETT
T ss_pred CCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcCc
Confidence 478999999999999999985433 9999999999999999999887754 899999999764 2 22578999996432
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
. .....+++.+.++|+|||.+++.
T Consensus 152 ~------------------~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 152 K------------------AQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp S------------------SSHHHHHHHHGGGEEEEEEEEEE
T ss_pred H------------------HHHHHHHHHHHHhcCCCeEEEEe
Confidence 1 34678999999999999999873
No 130
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.58 E-value=5.2e-15 Score=122.17 Aligned_cols=107 Identities=13% Similarity=0.084 Sum_probs=84.6
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHH-------hhcCC--CceEEEEcccCCCCCCC--Cce
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERL-------LLKGY--KEVKVLEADMLDLPFSN--DCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~-------~~~~~--~~i~~~~~d~~~~~~~~--~~~ 68 (201)
+.+|||||||+|.++..++.. +..+|+|+|+++.+++.|+++. ...+. .++.++++|+.++++.. ..+
T Consensus 174 gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~a 253 (438)
T 3uwp_A 174 DDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANT 253 (438)
T ss_dssp TCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTC
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCc
Confidence 468999999999999999865 4447999999999999988754 22332 58999999998876533 469
Q ss_pred eEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 69 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
|+|+++..++ .++..+.|.+++++|||||+|++.+...+
T Consensus 254 DVVf~Nn~~F----------------~pdl~~aL~Ei~RvLKPGGrIVssE~f~p 292 (438)
T 3uwp_A 254 SVIFVNNFAF----------------GPEVDHQLKERFANMKEGGRIVSSKPFAP 292 (438)
T ss_dssp SEEEECCTTC----------------CHHHHHHHHHHHTTSCTTCEEEESSCSSC
T ss_pred cEEEEccccc----------------CchHHHHHHHHHHcCCCCcEEEEeecccC
Confidence 9999876542 15778888999999999999998765443
No 131
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.57 E-value=2.4e-14 Score=110.03 Aligned_cols=98 Identities=17% Similarity=0.064 Sum_probs=82.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.++++....+ ++.++++|+.......++||+|++..+++++
T Consensus 71 ~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 147 (231)
T 1vbf_A 71 GQKVLEIGTGIGYYTALIAEIVD-KVVSVEINEKMYNYASKLLSYYN--NIKLILGDGTLGYEEEKPYDRVVVWATAPTL 147 (231)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTCS--SEEEEESCGGGCCGGGCCEEEEEESSBBSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHcC-EEEEEeCCHHHHHHHHHHHhhcC--CeEEEECCcccccccCCCccEEEECCcHHHH
Confidence 46899999999999999998874 99999999999999999987665 8999999988732235789999998888765
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
. +++.++|+|||++++.....
T Consensus 148 ---------------~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 148 ---------------L------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp ---------------C------HHHHHTEEEEEEEEEEECSS
T ss_pred ---------------H------HHHHHHcCCCcEEEEEEcCC
Confidence 1 35788999999999886543
No 132
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.57 E-value=1.2e-14 Score=117.45 Aligned_cols=99 Identities=17% Similarity=0.085 Sum_probs=84.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+. .+|+++|+++++++.+++++...+.+++.++.+|+.+.....++||+|++..+++
T Consensus 76 ~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 76 GMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVD 155 (317)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBS
T ss_pred cCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCHH
Confidence 47899999999999999998754 2699999999999999999988887789999999987544457899999988887
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++ . +++.+.|+|||++++...
T Consensus 156 ~~---------------~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 156 EV---------------P------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp CC---------------C------HHHHHHEEEEEEEEEEBC
T ss_pred HH---------------H------HHHHHhcCCCcEEEEEEC
Confidence 65 1 467889999999998753
No 133
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.57 E-value=6.2e-15 Score=107.87 Aligned_cols=105 Identities=13% Similarity=0.205 Sum_probs=82.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-C-C--CCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-P-F--SNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~--~~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|.++..+++.++ .|+++|+++.+++.+++++...+. +++++++|+.+. + . ..++||+|+++..
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 119 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFMAPP 119 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEECCC
Confidence 46899999999999999999987 599999999999999999887776 889999998763 2 1 1247999998765
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHh--hcccCCcEEEEEecCCcc
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVH--RVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~L~~gG~l~~~~~~~~~ 124 (201)
++ - ...++++.+. ++|+|||.+++.......
T Consensus 120 ~~-~----------------~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 120 YA-M----------------DLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp TT-S----------------CTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred Cc-h----------------hHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 53 1 1123444444 999999999987765544
No 134
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.57 E-value=2.2e-14 Score=117.52 Aligned_cols=105 Identities=19% Similarity=0.319 Sum_probs=89.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++++...+.. +++++.+|+.+ +++. .||+|++..++|
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~-~~D~v~~~~vl~ 260 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLPR-KADAIILSFVLL 260 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCSS-CEEEEEEESCGG
T ss_pred CcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCCC-CccEEEEccccc
Confidence 368999999999999999988655 8999999 99999999998877653 79999999876 3433 499999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++ ..++..++++++.++|+|||++++.+..
T Consensus 261 ~~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 261 NW-------------PDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp GS-------------CHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CC-------------CHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 75 3355679999999999999999988765
No 135
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.57 E-value=2.5e-14 Score=111.59 Aligned_cols=102 Identities=20% Similarity=0.197 Sum_probs=83.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCC-CCCC--CCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLD-LPFS--NDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~-~~~~--~~~~D~v~~~ 74 (201)
+.+|||+|||+|..+..++...+ .+|+++|+++.+++.+++++...+.. +++++++|+.. ++.. .++||+|++.
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d 143 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFID 143 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEEC
T ss_pred CCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEEC
Confidence 47899999999999999998743 39999999999999999999887754 79999999875 2221 3489999974
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.. ......+++++.++|+|||.+++...
T Consensus 144 ~~------------------~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 144 AD------------------KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp SC------------------GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred Cc------------------hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 32 24567899999999999999887544
No 136
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=1.5e-14 Score=113.65 Aligned_cols=119 Identities=17% Similarity=0.167 Sum_probs=85.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhh---cCCC-ceEEEEcccCCC-------CCCCCce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLL---KGYK-EVKVLEADMLDL-------PFSNDCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~---~~~~-~i~~~~~d~~~~-------~~~~~~~ 68 (201)
+.+|||+|||+|.++..++...+. +|+++|+++.+++.+++++.. .+.. ++.++++|+.+. .++.++|
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~f 116 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHF 116 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCE
T ss_pred CCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCc
Confidence 358999999999999999988654 999999999999999999887 6654 599999999876 2456789
Q ss_pred eEEEeccccceeeecCCCCCC--CCC--ccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 69 DVVIEKATMEVLFVNSGDPWN--PQP--ETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~~~~--~~~--~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
|+|+++..+...- ....|.. ... ........+++.+.++|+|||+++++..
T Consensus 117 D~Vv~nPPy~~~~-~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 117 HHVIMNPPYNDAG-DRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp EEEEECCCC----------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEECCCCcCCC-CCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 9999874432110 0000000 000 0112367899999999999999987653
No 137
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.57 E-value=4.7e-15 Score=116.22 Aligned_cols=100 Identities=17% Similarity=0.215 Sum_probs=85.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++...++.. +.+.++|+... ++.++||+|+++...
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~-~~~~~fD~Vv~n~~~--- 194 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAA-LPFGPFDLLVANLYA--- 194 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHH-GGGCCEEEEEEECCH---
T ss_pred CCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhc-CcCCCCCEEEECCcH---
Confidence 46899999999999999999888 9999999999999999999887765 89999998762 335789999986543
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.....+++++.++|+|||++++....
T Consensus 195 ---------------~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 195 ---------------ELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp ---------------HHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---------------HHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 34578999999999999999987554
No 138
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.56 E-value=1.4e-14 Score=117.44 Aligned_cols=105 Identities=14% Similarity=0.191 Sum_probs=88.8
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcC-CCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKG-YKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
.+|||+|||+|..+..+++..+. +++++|+ +.+++.+++++...+ .++++++.+|+.+ +++ ++||+|++..++|+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~ 245 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGD 245 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGG
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccC
Confidence 48999999999999999987554 9999999 999999998876544 2479999999987 554 67999999999987
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+ ..+...++++++.+.|+|||++++.+...
T Consensus 246 ~-------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 246 L-------------DEAASLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp C-------------CHHHHHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred C-------------CHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 5 34566799999999999999999987653
No 139
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.56 E-value=1.3e-14 Score=114.85 Aligned_cols=104 Identities=19% Similarity=0.292 Sum_probs=81.3
Q ss_pred CcEEEecCCCCh----hhHHHHhc-C--C--CeEEEEECCHHHHHHHHHHHhh-----------------------cC--
Q 028957 2 TSVLELGCGNSR----LSEGLYND-G--I--TAITCIDLSAVAVEKMQERLLL-----------------------KG-- 47 (201)
Q Consensus 2 ~~vLDlG~G~G~----~~~~l~~~-~--~--~~v~~vD~~~~~~~~~~~~~~~-----------------------~~-- 47 (201)
.+|||+|||+|. ++..+++. + . .+|+|+|+|+.+++.|+++.-. .+
T Consensus 107 ~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~ 186 (274)
T 1af7_A 107 YRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLV 186 (274)
T ss_dssp EEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEE
T ss_pred cEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCce
Confidence 489999999998 55555554 2 1 2899999999999999986410 00
Q ss_pred ------CCceEEEEcccCCCCCC-CCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 48 ------YKEVKVLEADMLDLPFS-NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 48 ------~~~i~~~~~d~~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
..++.|.++|+.+.+++ .++||+|+|.++++++ ..+...++++++++.|+|||.+++.
T Consensus 187 ~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf-------------~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 187 RVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYF-------------DKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGS-------------CHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred eechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhC-------------CHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 02689999999886554 5789999999998776 3456789999999999999999863
No 140
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.56 E-value=2.3e-15 Score=114.89 Aligned_cols=108 Identities=18% Similarity=0.220 Sum_probs=79.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHH----HhhcCCCceEEEEcccCCCCCCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQER----LLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~----~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 75 (201)
+.+|||+|||+|.++..+++..+. +|+++|+++.+++.+.++ ....+.+++.++++|+.+++++.++ |.+....
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~ 106 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLM 106 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEES
T ss_pred CCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEc
Confidence 468999999999999999998544 999999999988864333 3334566899999999998877666 7776322
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
...... .++..+..++++++.++|||||.+++..
T Consensus 107 ~~~~~~----------~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 107 PWGSLL----------RGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp CCHHHH----------HHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhhh----------hhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 111100 0011233789999999999999998753
No 141
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.56 E-value=1.3e-14 Score=119.46 Aligned_cols=102 Identities=21% Similarity=0.294 Sum_probs=85.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
|++|||||||+|.++..+++.|..+|+++|.++ +++.|+++++.++. ++|.++.+|+..+.++ .++|+|++-..-..
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~ 161 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYG 161 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTT
T ss_pred CCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeeccccc
Confidence 578999999999999999999988999999986 88999999888875 4699999999988776 68999998654443
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
++ +...+..++....+.|+|||.++
T Consensus 162 l~------------~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 162 LL------------HESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp BT------------TTCSHHHHHHHHHHHEEEEEEEE
T ss_pred cc------------ccchhhhHHHHHHhhCCCCceEC
Confidence 32 22456788888899999999977
No 142
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.56 E-value=1e-14 Score=119.01 Aligned_cols=109 Identities=24% Similarity=0.340 Sum_probs=89.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.++. +|+++|+++.+++.+++++...+. .++++.+|+.... .++||+|+++..+|.
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~-~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~ 273 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGV-EGEVFASNVFSEV--KGRFDMIISNPPFHD 273 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTC-CCEEEECSTTTTC--CSCEEEEEECCCCCS
T ss_pred CCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCC-CCEEEEccccccc--cCCeeEEEECCCccc
Confidence 358999999999999999998765 999999999999999999887764 4678888887643 678999999888874
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
... .+.....++++++.++|+|||.+++.....
T Consensus 274 g~~----------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 306 (343)
T 2pjd_A 274 GMQ----------TSLDAAQTLIRGAVRHLNSGGELRIVANAF 306 (343)
T ss_dssp SSH----------HHHHHHHHHHHHHGGGEEEEEEEEEEEETT
T ss_pred Ccc----------CCHHHHHHHHHHHHHhCCCCcEEEEEEcCC
Confidence 210 133567899999999999999999887543
No 143
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.56 E-value=1.8e-14 Score=112.33 Aligned_cols=114 Identities=17% Similarity=0.218 Sum_probs=84.3
Q ss_pred CcEEEecCCCChhhHHHHhc--CCC-eEEEEECCHHHHHHHHHHHhhc---CCCc-------------------------
Q 028957 2 TSVLELGCGNSRLSEGLYND--GIT-AITCIDLSAVAVEKMQERLLLK---GYKE------------------------- 50 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~--~~~-~v~~vD~~~~~~~~~~~~~~~~---~~~~------------------------- 50 (201)
.+|||+|||+|.++..++.. ... +|+++|+++.+++.+++++... +..+
T Consensus 53 ~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (250)
T 1o9g_A 53 VTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAAR 132 (250)
T ss_dssp EEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhhh
Confidence 58999999999999999876 322 8999999999999999887654 3211
Q ss_pred -eE-------------EEEcccCCCCC-----CCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccC
Q 028957 51 -VK-------------VLEADMLDLPF-----SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP 111 (201)
Q Consensus 51 -i~-------------~~~~d~~~~~~-----~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 111 (201)
+. +.++|+.+... ...+||+|+++..++.. ..|.. ........++++++.++|+|
T Consensus 133 ~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~-----~~~~~-~~~~~~~~~~l~~~~~~Lkp 206 (250)
T 1o9g_A 133 RLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGER-----THWEG-QVPGQPVAGLLRSLASALPA 206 (250)
T ss_dssp HHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGS-----SSSSS-CCCHHHHHHHHHHHHHHSCT
T ss_pred hhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecc-----ccccc-cccccHHHHHHHHHHHhcCC
Confidence 56 99999876321 34589999997665432 11100 01246678999999999999
Q ss_pred CcEEEEEecC
Q 028957 112 DGLFISVSFG 121 (201)
Q Consensus 112 gG~l~~~~~~ 121 (201)
||++++....
T Consensus 207 gG~l~~~~~~ 216 (250)
T 1o9g_A 207 HAVIAVTDRS 216 (250)
T ss_dssp TCEEEEEESS
T ss_pred CcEEEEeCcc
Confidence 9999985443
No 144
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.56 E-value=2.7e-14 Score=108.65 Aligned_cols=101 Identities=21% Similarity=0.097 Sum_probs=83.5
Q ss_pred CCcEEEecCCCChhhHHHHhcC-C-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-I-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+ + .+|+++|+++.+++.+++++...+.+++.+..+|+.......++||+|++..+++
T Consensus 78 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~ 157 (215)
T 2yxe_A 78 GMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGP 157 (215)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBBS
T ss_pred CCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCchH
Confidence 4689999999999999998875 3 3999999999999999999887777789999999854322256899999988887
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
++ . +++.++|+|||++++.....
T Consensus 158 ~~---------------~------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 158 KI---------------P------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp SC---------------C------HHHHHTEEEEEEEEEEESSS
T ss_pred HH---------------H------HHHHHHcCCCcEEEEEECCC
Confidence 55 1 37889999999999876543
No 145
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.56 E-value=2.6e-14 Score=109.45 Aligned_cols=106 Identities=17% Similarity=0.183 Sum_probs=83.4
Q ss_pred CCcEEEecCCCChhhHHHHhcC--CCeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCC-CC-CC----CCceeEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG--ITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLD-LP-FS----NDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~-~~-~~----~~~~D~v 71 (201)
+.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++...+.. +++++++|+.. ++ .. .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V 138 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMV 138 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEE
Confidence 4689999999999999999862 239999999999999999999887754 59999999855 22 22 2689999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
++....+.. ....++++.+ ++|+|||.+++.....
T Consensus 139 ~~d~~~~~~---------------~~~~~~~~~~-~~LkpgG~lv~~~~~~ 173 (221)
T 3u81_A 139 FLDHWKDRY---------------LPDTLLLEKC-GLLRKGTVLLADNVIV 173 (221)
T ss_dssp EECSCGGGH---------------HHHHHHHHHT-TCCCTTCEEEESCCCC
T ss_pred EEcCCcccc---------------hHHHHHHHhc-cccCCCeEEEEeCCCC
Confidence 986554332 4455677777 9999999998765543
No 146
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.56 E-value=1.3e-15 Score=115.37 Aligned_cols=118 Identities=14% Similarity=0.071 Sum_probs=67.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCC-----CceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-----DCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~~D~v~~~ 74 (201)
+.+|||+|||+|.++..+++.++. +++++|+++.+++.+++++...+. +++++++|+.+ +++. ++||+|+++
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~-~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIE-WLIERAERGRPWHAIVSN 108 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC--------------------CCHHHHHH-HHHHHHHTTCCBSEEEEC
T ss_pred CCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHh-hhhhhhhccCcccEEEEC
Confidence 468999999999999999998655 999999999999999999877665 78889999876 4433 789999996
Q ss_pred cccceeeecC-CCC----------CCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 75 ATMEVLFVNS-GDP----------WNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 75 ~~l~~~~~~~-~~~----------~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..++..-... ..+ +...........++++++.++|+|||++++...
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 5543220000 000 000001112237899999999999999544443
No 147
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.56 E-value=2.6e-14 Score=110.12 Aligned_cols=98 Identities=11% Similarity=0.152 Sum_probs=80.1
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC----CCCCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD----LPFSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~----~~~~~~~~D~v~~~~ 75 (201)
+.+|||+|||+|.++..+++. +..+|+++|+++.+++.++++.... +++.++.+|+.. .++. ++||+|+.
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~-~~~D~v~~-- 149 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIV-EKVDVIYE-- 149 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTS-CCEEEEEE--
T ss_pred CCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccC-ccEEEEEE--
Confidence 468999999999999999987 4249999999999999999887654 589999999987 5555 78999983
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
.+ ........+++++.++|+|||.+++.
T Consensus 150 ---~~------------~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 150 ---DV------------AQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ---CC------------CSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ---ec------------CChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 11 01234577899999999999999885
No 148
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.56 E-value=2.9e-14 Score=105.17 Aligned_cols=100 Identities=14% Similarity=0.209 Sum_probs=83.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++...+.+++.++++|+.+ +++.++||+|++..+
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~---- 109 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAKR-CKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT---- 109 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHTT-SSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC----
T ss_pred CCEEEEeCCCCCHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc----
Confidence 468999999999999999983 33999999999999999999988877789999999887 555578999998654
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
.....+++++.++ |||.+++......
T Consensus 110 ---------------~~~~~~l~~~~~~--~gG~l~~~~~~~~ 135 (183)
T 2yxd_A 110 ---------------KNIEKIIEILDKK--KINHIVANTIVLE 135 (183)
T ss_dssp ---------------SCHHHHHHHHHHT--TCCEEEEEESCHH
T ss_pred ---------------ccHHHHHHHHhhC--CCCEEEEEecccc
Confidence 2346788888888 9999998876543
No 149
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.55 E-value=1.7e-14 Score=112.52 Aligned_cols=102 Identities=17% Similarity=0.178 Sum_probs=86.0
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhc-CCCceEEEEcccCCCCCCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLK-GYKEVKVLEADMLDLPFSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|.++..+++. ++ .+|+++|+++.+++.+++++... +.+++.+..+|+.+.+++.++||+|++..
T Consensus 97 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~~-- 174 (258)
T 2pwy_A 97 GMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDL-- 174 (258)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEES--
T ss_pred CCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEECC--
Confidence 468999999999999999988 53 39999999999999999998776 55689999999988767778899999721
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.+..++++++.++|+|||.+++.....
T Consensus 175 ------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 175 ------------------MEPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp ------------------SCGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred ------------------cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 122468999999999999999887654
No 150
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.55 E-value=1e-14 Score=112.08 Aligned_cols=89 Identities=19% Similarity=0.307 Sum_probs=76.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccC-CCCCC-CCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADML-DLPFS-NDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~-~~~~~-~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++ .+++.++++|+. .++++ +++||+|+++.
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~--- 119 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGLGAPFGLIVSRR--- 119 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTCCCCEEEEEEES---
T ss_pred CCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcCCCCEEEEEeCC---
Confidence 46899999999999999999866 999999999999999987 247899999994 56776 78999999851
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
+...+++++.++|+|||.++
T Consensus 120 ------------------~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 120 ------------------GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp ------------------CCSGGGGGHHHHEEEEEEEE
T ss_pred ------------------CHHHHHHHHHHHcCCCcEEE
Confidence 22467889999999999998
No 151
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.55 E-value=1e-14 Score=112.06 Aligned_cols=99 Identities=19% Similarity=0.336 Sum_probs=81.9
Q ss_pred CcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCC--ceEEEEcccCCC--CCCCCceeEEEecc
Q 028957 2 TSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYK--EVKVLEADMLDL--PFSNDCFDVVIEKA 75 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~--~i~~~~~d~~~~--~~~~~~~D~v~~~~ 75 (201)
.+|||+|||+|..+..++...+ .+|+++|+++.+++.+++++...+.. +++++++|+.+. .++.++||+|++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~ 137 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQV 137 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcC
Confidence 3899999999999999988632 39999999999999999999887754 799999998763 23357899999743
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
.. .....+++++.++|+|||.+++.
T Consensus 138 ~~------------------~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 138 SP------------------MDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CT------------------TTHHHHHHHHHHHEEEEEEEEET
T ss_pred cH------------------HHHHHHHHHHHHHcCCCcEEEEe
Confidence 21 34567899999999999999974
No 152
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.54 E-value=1.6e-14 Score=112.80 Aligned_cols=100 Identities=20% Similarity=0.285 Sum_probs=83.9
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCC-eEEEEECCHHHHHHHHHHHhhcCCCc-eEEEEcccCCCCCCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLDLPFSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|.++..++.. ++. +++++|+++.+++.+++++...+.++ ++++++|+.+. ++.++||+|+++.
T Consensus 94 ~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~~-- 170 (255)
T 3mb5_A 94 GDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILDL-- 170 (255)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEECS--
T ss_pred CCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEECC--
Confidence 468999999999999999988 533 99999999999999999998877655 99999999864 5667899999731
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.+...+++++.++|+|||.+++....
T Consensus 171 ------------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 171 ------------------PQPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp ------------------SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred ------------------CCHHHHHHHHHHHcCCCCEEEEEECC
Confidence 12246899999999999999987654
No 153
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.54 E-value=1.5e-14 Score=114.40 Aligned_cols=101 Identities=17% Similarity=0.227 Sum_probs=84.6
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhc-CCCceEEEEcccCCCCCCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLK-GYKEVKVLEADMLDLPFSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|.++..+++. ++ .+|+++|+++.+++.+++++... +.+++.++++|+.+ +++.++||+|++..
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~~~-- 187 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIADI-- 187 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEECC--
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEEcC--
Confidence 468999999999999999987 33 39999999999999999999877 66789999999987 55567899999721
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.+..++++++.++|+|||++++.+...
T Consensus 188 ------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 188 ------------------PDPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp ------------------SCGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred ------------------cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 122478999999999999999887654
No 154
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.54 E-value=2.5e-14 Score=115.47 Aligned_cols=122 Identities=19% Similarity=0.194 Sum_probs=88.0
Q ss_pred CCcEEEecCCCChhhHHHHhcC-C-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccc-
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-I-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATM- 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l- 77 (201)
|.+|||+|||+|..+..++... . .+|+++|+++.+++.+++++...+.+++.++++|+..++...++||+|++....
T Consensus 119 g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcs 198 (315)
T 1ixk_A 119 GEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCT 198 (315)
T ss_dssp TCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCC
Confidence 4689999999999999999863 2 389999999999999999998888778999999998765445689999974321
Q ss_pred --ceeeecCCCCCCCCCcc----HHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 78 --EVLFVNSGDPWNPQPET----VTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 78 --~~~~~~~~~~~~~~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
..+..+.+..|...++. .....++++++.++|||||++++.+++.
T Consensus 199 g~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 199 GSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp STTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 11100111111111111 1123689999999999999999887653
No 155
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.54 E-value=3.7e-14 Score=112.21 Aligned_cols=118 Identities=14% Similarity=0.229 Sum_probs=87.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..++...+. +|+++|+++.+++.++++....+.+++.++++|+... ++.++||+|+++..++.
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~~ 188 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPYID 188 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCCBC
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCCCC
Confidence 368999999999999999876433 9999999999999999999887777899999998763 33578999998744321
Q ss_pred e----------eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 80 L----------FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 80 ~----------~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
. ...+...+............+++++.+.|+|||.+++..
T Consensus 189 ~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 189 EQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp TTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred ccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 1 000000000001112457889999999999999988764
No 156
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.53 E-value=6.8e-14 Score=111.13 Aligned_cols=103 Identities=18% Similarity=0.208 Sum_probs=80.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEEC-CHHHHHHHHHHH-----hhcCC-----CceEEEEcccCCCC--C----
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDL-SAVAVEKMQERL-----LLKGY-----KEVKVLEADMLDLP--F---- 63 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~-~~~~~~~~~~~~-----~~~~~-----~~i~~~~~d~~~~~--~---- 63 (201)
+++|||+|||+|.++..++..+..+|+++|+ ++.+++.++++. ...+. +++.+...|+.+.. +
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 159 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCT 159 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHH
T ss_pred CCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhc
Confidence 4689999999999999999887659999999 899999999998 44443 26788877765421 1
Q ss_pred CCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhccc---C--CcEEEEE
Q 028957 64 SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLK---P--DGLFISV 118 (201)
Q Consensus 64 ~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~---~--gG~l~~~ 118 (201)
+.++||+|++..++++. .....+++.+.++|+ | ||.+++.
T Consensus 160 ~~~~fD~Ii~~dvl~~~---------------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 160 GLQRFQVVLLADLLSFH---------------QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp SCSSBSEEEEESCCSCG---------------GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred cCCCCCEEEEeCcccCh---------------HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 35789999987666433 667899999999999 9 9987665
No 157
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.53 E-value=1.7e-14 Score=125.13 Aligned_cols=106 Identities=14% Similarity=0.164 Sum_probs=84.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC--CCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL--PFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~v~~~~~l~ 78 (201)
|.+|||||||+|.++..+++.|. .|+|+|+++.+++.|+.+....+..++++.++++.++ ...+++||+|+|..+++
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~e 145 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFH 145 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHH
T ss_pred CCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchh
Confidence 35899999999999999999998 8999999999999999998877645899999999876 35678999999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
|+ .+ ......+..+.+.|+++|..++...
T Consensus 146 hv------------~~-~~~~~~~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 146 HI------------VH-LHGIDEVKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp HH------------HH-HHCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred cC------------CC-HHHHHHHHHHHHHhccccceeeEEe
Confidence 87 11 1112223456677777777665544
No 158
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.53 E-value=3.5e-14 Score=120.63 Aligned_cols=102 Identities=18% Similarity=0.294 Sum_probs=85.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+++|||+|||+|.++..+++.+..+|+++|+++ +++.+++++...++ ++++++.+|+.+++++ ++||+|+++..+++
T Consensus 159 ~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~ 236 (480)
T 3b3j_A 159 DKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYM 236 (480)
T ss_dssp TCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHH
T ss_pred CCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHh
Confidence 468999999999999999887656999999998 99999999888775 5799999999887654 58999999876555
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 117 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 117 (201)
+ ..+.....+.++.+.|+|||.+++
T Consensus 237 ~-------------~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 237 L-------------FNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp H-------------TCHHHHHHHHHGGGGEEEEEEEES
T ss_pred c-------------CcHHHHHHHHHHHHhcCCCCEEEE
Confidence 4 224556777889999999999884
No 159
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=2.7e-14 Score=112.96 Aligned_cols=102 Identities=20% Similarity=0.161 Sum_probs=85.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+++|||+|||+|.++..+++.+. .+|+++|+++.+++.+++++..++++++.++++|+.+.+. .++||+|++....
T Consensus 120 ~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~-- 196 (272)
T 3a27_A 120 NEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH-- 196 (272)
T ss_dssp TCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS--
T ss_pred CCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc--
Confidence 46899999999999999998843 3999999999999999999998888889999999988733 5689999974321
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
....++..+.+.|+|||.+++.++..
T Consensus 197 -----------------~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 197 -----------------KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp -----------------SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred -----------------cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 33568888999999999999876643
No 160
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.53 E-value=7e-14 Score=108.02 Aligned_cols=100 Identities=24% Similarity=0.180 Sum_probs=81.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCC-ceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSND-CFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.+..+|+++|+++.+++.+++++...+.+++.+..+|+. .+++.. +||+|++..+++.
T Consensus 92 ~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 92 GMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGS-KGFPPKAPYDVIIVTAGAPK 170 (235)
T ss_dssp TCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGG-GCCGGGCCEEEEEECSBBSS
T ss_pred CCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcc-cCCCCCCCccEEEECCcHHH
Confidence 46899999999999999988753589999999999999999998887778999999973 344333 5999999877765
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+ .+++.+.|+|||++++.....
T Consensus 171 ~---------------------~~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 171 I---------------------PEPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp C---------------------CHHHHHTEEEEEEEEEEECSS
T ss_pred H---------------------HHHHHHhcCCCcEEEEEEecC
Confidence 4 136788999999999876543
No 161
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.52 E-value=5e-14 Score=108.06 Aligned_cols=100 Identities=14% Similarity=0.125 Sum_probs=82.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCC------CeEEEEECCHHHHHHHHHHHhhcC-----CCceEEEEcccCCCC----CCC
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI------TAITCIDLSAVAVEKMQERLLLKG-----YKEVKVLEADMLDLP----FSN 65 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~------~~v~~vD~~~~~~~~~~~~~~~~~-----~~~i~~~~~d~~~~~----~~~ 65 (201)
+.+|||+|||+|.++..+++... .+|+++|+++.+++.+++++...+ .+++.++.+|+.... ...
T Consensus 81 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 160 (227)
T 2pbf_A 81 GSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKEL 160 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccC
Confidence 46899999999999999988743 299999999999999999988765 468999999998754 445
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++||+|++...++.+ ++++.+.|+|||++++....
T Consensus 161 ~~fD~I~~~~~~~~~---------------------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 161 GLFDAIHVGASASEL---------------------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp CCEEEEEECSBBSSC---------------------CHHHHHHEEEEEEEEEEEEE
T ss_pred CCcCEEEECCchHHH---------------------HHHHHHhcCCCcEEEEEEcc
Confidence 789999987766433 36778999999999887653
No 162
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.52 E-value=5.8e-14 Score=107.43 Aligned_cols=102 Identities=16% Similarity=0.152 Sum_probs=82.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCC-C-C---CCCceeEEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL-P-F---SNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~-~-~---~~~~~D~v~ 72 (201)
+.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...+.. +++++++|+... + + ..++||+|+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~ 138 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIF 138 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEE
T ss_pred CCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEE
Confidence 47899999999999999998843 29999999999999999999877754 599999998653 1 1 125799999
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+.... .....+++++.++|+|||.+++...
T Consensus 139 ~d~~~------------------~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 139 IDADK------------------QNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp ECSCG------------------GGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred EcCCc------------------HHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 74332 4557899999999999998887543
No 163
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.52 E-value=3.7e-14 Score=115.24 Aligned_cols=117 Identities=16% Similarity=0.123 Sum_probs=87.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCC--ceEEEEcccCCCCC----CCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK--EVKVLEADMLDLPF----SNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~--~i~~~~~d~~~~~~----~~~~~D~v~~~ 74 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.+++++..+++. ++.++++|+.+... ..++||+|+++
T Consensus 154 ~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~d 232 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTD 232 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEEC
T ss_pred CCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEEC
Confidence 35899999999999999999887 9999999999999999999887765 38999999876421 14689999985
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
......- +-..-.....+...+++++.++|+|||.+++......
T Consensus 233 PP~~~~~-----~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~ 276 (332)
T 2igt_A 233 PPKFGRG-----THGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSI 276 (332)
T ss_dssp CCSEEEC-----TTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCT
T ss_pred CccccCC-----chHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCC
Confidence 3311100 0000001345678999999999999999776654433
No 164
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.52 E-value=6.2e-14 Score=117.23 Aligned_cols=103 Identities=15% Similarity=0.081 Sum_probs=82.2
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHH-------HHHHhhcC--CCceEEEEcccCCCC--C--CCC
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKM-------QERLLLKG--YKEVKVLEADMLDLP--F--SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~-------~~~~~~~~--~~~i~~~~~d~~~~~--~--~~~ 66 (201)
+.+|||+|||+|.++..++.. +..+|+|+|+++.+++.| ++++...+ ..++.++++|....+ + ..+
T Consensus 243 g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~ 322 (433)
T 1u2z_A 243 GDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIP 322 (433)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGG
T ss_pred CCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccC
Confidence 468999999999999999986 444899999999999888 88887777 568999988654321 1 246
Q ss_pred ceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 67 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 67 ~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
+||+|+++..+. . ++..++++++.+.|+|||++++..
T Consensus 323 ~FDvIvvn~~l~-~---------------~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 323 QCDVILVNNFLF-D---------------EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp GCSEEEECCTTC-C---------------HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred CCCEEEEeCccc-c---------------ccHHHHHHHHHHhCCCCeEEEEee
Confidence 899999865541 1 566788999999999999999864
No 165
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.52 E-value=1.3e-14 Score=106.92 Aligned_cols=100 Identities=19% Similarity=0.243 Sum_probs=76.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+ +|+++|+++.+++. .++++++++|+.. +++.++||+|+++..++..
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~---------~~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~ 91 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES---------HRGGNLVRADLLC-SINQESVDVVVFNPPYVPD 91 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT---------CSSSCEEECSTTT-TBCGGGCSEEEECCCCBTT
T ss_pred CCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc---------ccCCeEEECChhh-hcccCCCCEEEECCCCccC
Confidence 4689999999999999999887 99999999999987 2478999999987 5556899999998766532
Q ss_pred eecCCCC--CCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 81 FVNSGDP--WNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.++ |. ...+...+++++.+.+ |||.+++....
T Consensus 92 ----~~~~~~~----~~~~~~~~~~~~~~~l-pgG~l~~~~~~ 125 (170)
T 3q87_B 92 ----TDDPIIG----GGYLGREVIDRFVDAV-TVGMLYLLVIE 125 (170)
T ss_dssp ----CCCTTTB----CCGGGCHHHHHHHHHC-CSSEEEEEEEG
T ss_pred ----Ccccccc----CCcchHHHHHHHHhhC-CCCEEEEEEec
Confidence 010 10 1122345777788888 99999987654
No 166
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.52 E-value=1.8e-13 Score=112.03 Aligned_cols=104 Identities=18% Similarity=0.215 Sum_probs=88.7
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
.+|+|+|||+|.++..+++..+. +++..|. +.+++.++++....+.++++++.+|++..+.+ .+|++++..++|.+
T Consensus 181 ~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh~~ 257 (353)
T 4a6d_A 181 PLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLHDW 257 (353)
T ss_dssp SEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGGGS
T ss_pred CeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeecccC
Confidence 58999999999999999999776 8888887 88999999887666667899999999875543 57999999999876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+.++..++|+++++.|+|||++++.+..
T Consensus 258 -------------~d~~~~~iL~~~~~al~pgg~lli~e~~ 285 (353)
T 4a6d_A 258 -------------ADGKCSHLLERIYHTCKPGGGILVIESL 285 (353)
T ss_dssp -------------CHHHHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred -------------CHHHHHHHHHHHHhhCCCCCEEEEEEee
Confidence 4577889999999999999999998764
No 167
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.51 E-value=1.2e-14 Score=111.93 Aligned_cols=108 Identities=20% Similarity=0.210 Sum_probs=75.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECC-HHHHHHH---HHHHhhcCCCceEEEEcccCCCCCC-CCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLS-AVAVEKM---QERLLLKGYKEVKVLEADMLDLPFS-NDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~-~~~~~~~---~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~D~v~~~ 74 (201)
+.+|||+|||+|.++..+++..+. +|+|+|+| +.+++.| +++....+.+++.++++|+..++.. .+.+|.+.++
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~ 104 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISIL 104 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEe
Confidence 458999999999999999866444 89999999 6666665 7777666777899999999887421 1334444432
Q ss_pred cccceeeecCCCCCCCCCcc-HHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 75 ATMEVLFVNSGDPWNPQPET-VTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
. ||.....+ ..+...+++++.++|||||++++..
T Consensus 105 ~-----------~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~ 139 (225)
T 3p2e_A 105 F-----------PWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVT 139 (225)
T ss_dssp S-----------CCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEE
T ss_pred C-----------CCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEE
Confidence 2 12100000 0112568999999999999998843
No 168
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.51 E-value=2.6e-15 Score=125.38 Aligned_cols=101 Identities=22% Similarity=0.311 Sum_probs=81.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCce--EEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEV--KVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i--~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++ +.+.. .+...++..+++++++||+|++..+++
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~ 182 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRTEGPANVIYAANTLC 182 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGG
T ss_pred CCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccCCCCEEEEEECChHH
Confidence 46899999999999999999877 999999999999998865 22111 122334444455568999999999998
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++ .+...+++++.++|+|||.+++....
T Consensus 183 h~---------------~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 183 HI---------------PYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp GC---------------TTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hc---------------CCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 77 57889999999999999999987643
No 169
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.51 E-value=3.7e-14 Score=108.57 Aligned_cols=102 Identities=12% Similarity=0.087 Sum_probs=82.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCC-C-CC----CCceeEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL-P-FS----NDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~-~-~~----~~~~D~v 71 (201)
+.+|||+|||+|..+..++...+ .+|+++|+++.+++.+++++...+.. ++.++++|+... + .. .++||+|
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v 144 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLI 144 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEE
Confidence 46899999999999999998732 39999999999999999999887754 599999998653 1 11 1689999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++... ......+++++.++|+|||.+++...
T Consensus 145 ~~~~~------------------~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 145 YIDAD------------------KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp EECSC------------------GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EECCC------------------HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 96432 24567899999999999999987544
No 170
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.51 E-value=5.5e-14 Score=116.46 Aligned_cols=117 Identities=15% Similarity=0.136 Sum_probs=89.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCC--ceEEEEcccCCC-C-C--CCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK--EVKVLEADMLDL-P-F--SNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~--~i~~~~~d~~~~-~-~--~~~~~D~v~~~ 74 (201)
+++|||+|||+|.++..++..+..+|+++|+++.+++.+++++..+++. ++.++++|+.+. + . ...+||+|++.
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~D 292 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIID 292 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEEC
Confidence 5789999999999999999877669999999999999999999988876 899999998762 2 1 23589999974
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
...... + . .........+.+++..+.+.|+|||.+++.+....
T Consensus 293 PP~~~~---~-~--~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~ 335 (385)
T 2b78_A 293 PPSFAR---N-K--KEVFSVSKDYHKLIRQGLEILSENGLIIASTNAAN 335 (385)
T ss_dssp CCCC-----------CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCCCCC---C-h--hhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCc
Confidence 322100 0 0 00112345677889999999999999998776543
No 171
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.51 E-value=4.8e-14 Score=111.64 Aligned_cols=122 Identities=12% Similarity=0.117 Sum_probs=87.3
Q ss_pred CCcEEEecCCCChhhHHHHhc--CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC----CCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYND--GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF----SNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D~v~~~ 74 (201)
|.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++...+.+++.++++|+..++. ..++||+|++.
T Consensus 84 g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d 163 (274)
T 3ajd_A 84 DDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLD 163 (274)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEE
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEc
Confidence 468999999999999999875 324999999999999999999998887789999999877543 25689999975
Q ss_pred ccccee-eecCCCCCCC--CCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 75 ATMEVL-FVNSGDPWNP--QPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 75 ~~l~~~-~~~~~~~~~~--~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
...... .....+.|.+ -........++++++.++|||||++++.+++.
T Consensus 164 ~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 164 APCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp ECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 322110 0000000100 00001235789999999999999999877653
No 172
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.51 E-value=4.5e-14 Score=108.85 Aligned_cols=101 Identities=19% Similarity=0.245 Sum_probs=83.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCC-CCC--CCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDL-PFS--NDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~-~~~--~~~~D~v~~~~ 75 (201)
+.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...+. +++.++.+|+... +.. .++||+|++..
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~ 134 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDA 134 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEG
T ss_pred CCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECC
Confidence 46899999999999999998753 3999999999999999999987775 4699999998763 321 46899999855
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.. .....+++.+.++|+|||.+++.+
T Consensus 135 ~~------------------~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 135 AK------------------GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp GG------------------SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred CH------------------HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 43 345789999999999999998864
No 173
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.51 E-value=9.1e-14 Score=106.53 Aligned_cols=100 Identities=19% Similarity=0.154 Sum_probs=81.8
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCC-eEEEEECCHHHHHHHHHHHhhcC-----CCceEEEEcccCCCCCCCCceeEEEe
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKG-----YKEVKVLEADMLDLPFSNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~-~v~~vD~~~~~~~~~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~D~v~~ 73 (201)
+.+|||+|||+|..+..+++. ++. +|+++|+++.+++.+++++...+ .+++.++++|+.......++||+|++
T Consensus 78 ~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~ 157 (226)
T 1i1n_A 78 GAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHV 157 (226)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEE
Confidence 468999999999999999887 443 99999999999999999887643 35799999998865444578999998
Q ss_pred ccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
...++.+ ++++.++|+|||++++....
T Consensus 158 ~~~~~~~---------------------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 158 GAAAPVV---------------------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CSBBSSC---------------------CHHHHHTEEEEEEEEEEESC
T ss_pred CCchHHH---------------------HHHHHHhcCCCcEEEEEEec
Confidence 7766433 35788999999999987654
No 174
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.51 E-value=2.6e-13 Score=111.96 Aligned_cols=113 Identities=17% Similarity=0.172 Sum_probs=87.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..++..+.. +|+|+|+++.+++.+++++...++ +++++.++|+.+++.+.++||+|+++..++
T Consensus 218 ~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg 297 (373)
T 3tm4_A 218 GGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYG 297 (373)
T ss_dssp SCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC
T ss_pred CCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCC
Confidence 468999999999999999998764 899999999999999999988876 579999999999887778999999975544
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
....+ ...-.....++++.+.++| +|.+++++.+.
T Consensus 298 ~r~~~-------~~~~~~ly~~~~~~l~r~l--~g~~~~i~~~~ 332 (373)
T 3tm4_A 298 LKIGK-------KSMIPDLYMKFFNELAKVL--EKRGVFITTEK 332 (373)
T ss_dssp -------------CCHHHHHHHHHHHHHHHE--EEEEEEEESCH
T ss_pred cccCc-------chhHHHHHHHHHHHHHHHc--CCeEEEEECCH
Confidence 32110 0011122478889999988 56666665543
No 175
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.51 E-value=5.7e-14 Score=115.66 Aligned_cols=99 Identities=17% Similarity=0.279 Sum_probs=83.5
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++ .++++++.+|+.+ +++.+ |+|++..++|++
T Consensus 205 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~ 274 (368)
T 3reo_A 205 TTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------FSGVEHLGGDMFD-GVPKG--DAIFIKWICHDW 274 (368)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCCC--SEEEEESCGGGB
T ss_pred CEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------cCCCEEEecCCCC-CCCCC--CEEEEechhhcC
Confidence 68999999999999999988665 8999999 888776643 2589999999987 66544 999999999876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+.++..+++++++++|+|||++++.+...+
T Consensus 275 -------------~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 275 -------------SDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp -------------CHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred -------------CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 456778999999999999999999876543
No 176
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.51 E-value=4.9e-14 Score=115.13 Aligned_cols=103 Identities=20% Similarity=0.219 Sum_probs=80.7
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcC-CCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKG-YKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
.+|||+|||+|.++..+++..+. +++++|+ +.++. +++....+ .++++++.+|+. .+.+ +||+|++..++|+
T Consensus 186 ~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~ 259 (348)
T 3lst_A 186 GTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILHN 259 (348)
T ss_dssp EEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGGG
T ss_pred ceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhccC
Confidence 58999999999999999988666 8999999 44444 22222222 247999999997 3444 8999999999987
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+ ..++..+++++++++|||||++++.+...+
T Consensus 260 ~-------------~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 260 W-------------GDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp S-------------CHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred C-------------CHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 6 345668999999999999999999876433
No 177
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.50 E-value=9.2e-14 Score=109.24 Aligned_cols=97 Identities=29% Similarity=0.457 Sum_probs=81.2
Q ss_pred CCcEEEecCCCChhhHHHHhcC-CCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-ITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.. ..+|+++|+++.+++.++++. +++.+..+|+..+++++++||+|++..+.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~~-- 158 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPFSDTSMDAIIRIYAP-- 158 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSBCTTCEEEEEEESCC--
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCCCCCceeEEEEeCCh--
Confidence 4689999999999999999873 239999999999999998764 36799999998888778899999975331
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
.+++++.++|+|||.+++.++...+
T Consensus 159 --------------------~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 159 --------------------CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp --------------------CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred --------------------hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 2578899999999999998876544
No 178
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.50 E-value=1e-13 Score=106.86 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=80.0
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC---CCCCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD---LPFSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~---~~~~~~~~D~v~~~~ 75 (201)
+.+|||+|||+|.++..+++. ++ .+|+++|+++.+++.+.++.... +++.++++|+.+ ++...++||+|++..
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~ 155 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMVDVIFADV 155 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCEEEEEECC
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcEEEEEEcC
Confidence 468999999999999999987 33 39999999999888887776654 589999999987 334467899999743
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
. .......++.++.++|+|||.+++...
T Consensus 156 ~-----------------~~~~~~~~~~~~~~~LkpgG~l~i~~~ 183 (233)
T 2ipx_A 156 A-----------------QPDQTRIVALNAHTFLRNGGHFVISIK 183 (233)
T ss_dssp C-----------------CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred C-----------------CccHHHHHHHHHHHHcCCCeEEEEEEc
Confidence 2 113445678899999999999998543
No 179
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.50 E-value=4.9e-14 Score=111.41 Aligned_cols=102 Identities=19% Similarity=0.251 Sum_probs=84.7
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhc-C--CCceEEEEcccCCCCCCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLK-G--YKEVKVLEADMLDLPFSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~-~--~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 75 (201)
+.+|||+|||+|.++..++.. ++ .+|+++|+++.+++.+++++... + .+++.++.+|+...+++.++||+|++..
T Consensus 100 ~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 179 (280)
T 1i9g_A 100 GARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLDM 179 (280)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEES
T ss_pred CCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEECC
Confidence 468999999999999999985 43 39999999999999999998766 4 5689999999988777678899999721
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.+..++++++.++|+|||.+++.+...
T Consensus 180 --------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 206 (280)
T 1i9g_A 180 --------------------LAPWEVLDAVSRLLVAGGVLMVYVATV 206 (280)
T ss_dssp --------------------SCGGGGHHHHHHHEEEEEEEEEEESSH
T ss_pred --------------------cCHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 112368999999999999999877653
No 180
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.50 E-value=2.4e-13 Score=112.11 Aligned_cols=102 Identities=18% Similarity=0.224 Sum_probs=84.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC-CCC-CCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LPF-SNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~-~~~~~D~v~~~~~l 77 (201)
|++|||+| |+|.++..++..++ .+|+++|+++.+++.+++++...+..+++++++|+.. ++. ..++||+|+++..+
T Consensus 173 ~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~ 251 (373)
T 2qm3_A 173 NKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPE 251 (373)
T ss_dssp TCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCS
T ss_pred CCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCC
Confidence 46899999 99999999998876 4999999999999999999988776689999999988 553 34689999986544
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEE-EEEe
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLF-ISVS 119 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l-~~~~ 119 (201)
+. .....+++++.++|+|||++ ++..
T Consensus 252 ~~----------------~~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 252 TL----------------EAIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp SH----------------HHHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred ch----------------HHHHHHHHHHHHHcccCCeEEEEEE
Confidence 22 23588999999999999954 4443
No 181
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.49 E-value=7.4e-14 Score=106.00 Aligned_cols=100 Identities=23% Similarity=0.220 Sum_probs=81.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCC-CCCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDL-PFSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~-~~~~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|..+..++...+ .+|+++|+++.+++.+++++...+. ++++++++|+... +...+ ||+|++...
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~ 135 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD 135 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC
Confidence 46899999999999999998743 3999999999999999999877664 3699999998753 43345 999997522
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
......+++++.++|+|||.+++..
T Consensus 136 ------------------~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 136 ------------------VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ------------------TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred ------------------hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 1345789999999999999988743
No 182
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.49 E-value=7.3e-14 Score=114.86 Aligned_cols=99 Identities=15% Similarity=0.218 Sum_probs=83.6
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++ .++++++.+|+.+ +++.+ |+|++..++|++
T Consensus 203 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~ 272 (364)
T 3p9c_A 203 GTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-EVPSG--DTILMKWILHDW 272 (364)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCCC--SEEEEESCGGGS
T ss_pred CEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-CCCCC--CEEEehHHhccC
Confidence 68999999999999999988665 8999999 887766643 2589999999987 66644 999999999876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
..++..++++++++.|+|||++++.+...+
T Consensus 273 -------------~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 273 -------------SDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp -------------CHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred -------------CHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 456788999999999999999999876543
No 183
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.49 E-value=9.9e-14 Score=110.90 Aligned_cols=106 Identities=25% Similarity=0.419 Sum_probs=80.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhc-----CCCceEEEEcccCCC-CCCCCceeEEEe
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLK-----GYKEVKVLEADMLDL-PFSNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~-~~~~~~~D~v~~ 73 (201)
+++|||+|||+|..+..+++... .+|+++|+++.+++.+++++... .-++++++.+|+... ....++||+|++
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~ 163 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEE
Confidence 47899999999999999998743 48999999999999999987643 235899999998764 334678999997
Q ss_pred ccccceeeecCCCCCCCCCccHHHH--HHHHHHHhhcccCCcEEEEEe
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~ 119 (201)
... +|+.+ .... ..+++.+.+.|+|||.+++..
T Consensus 164 D~~---------~p~~~----~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 164 DCT---------DPIGP----GESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CC-----------------------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCC---------CccCc----chhccHHHHHHHHHHhcCCCCEEEEec
Confidence 432 22211 1122 689999999999999999865
No 184
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.48 E-value=7.8e-14 Score=110.37 Aligned_cols=100 Identities=15% Similarity=0.209 Sum_probs=83.5
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCC-eEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~-~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l 77 (201)
+.+|||+|||+|.++..+++. ++. +|+++|+++.+++.+++++...+. +++.++.+|+.+. ++.++||+|+++.
T Consensus 113 ~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~~-- 189 (277)
T 1o54_A 113 GDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLDV-- 189 (277)
T ss_dssp TCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEECC--
T ss_pred CCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEECC--
Confidence 468999999999999999987 543 999999999999999999887775 5799999998875 5567899999731
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.+...+++++.++|+|||.+++.+..
T Consensus 190 ------------------~~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 190 ------------------PDPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp ------------------SCGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred ------------------cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 12246889999999999999988764
No 185
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.48 E-value=1.5e-13 Score=114.17 Aligned_cols=111 Identities=18% Similarity=0.178 Sum_probs=88.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCC----CCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPF----SNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~----~~~~~D~v~~~~ 75 (201)
+++|||+|||+|.++..++..+..+|+++|+++.+++.+++++..+++. ++.++++|+.+... ...+||+|++..
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dp 297 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDP 297 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECC
Confidence 4689999999999999999886669999999999999999999988876 89999999876421 246899999742
Q ss_pred ccceeeecCCCCCCCCC-----ccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 76 TMEVLFVNSGDPWNPQP-----ETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
. ..... ........++.++.++|+|||.+++.+++.
T Consensus 298 P-----------~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 298 P-----------AFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp C-----------CSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred C-----------CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 2 11100 112457789999999999999998887764
No 186
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.48 E-value=1.8e-13 Score=106.07 Aligned_cols=101 Identities=20% Similarity=0.169 Sum_probs=83.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.+ .+++++|+++.+++.++++....+. +++.+..+|+.+...+.++||+|++..
T Consensus 92 ~~~vldiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~---- 166 (248)
T 2yvl_A 92 EKRVLEFGTGSGALLAVLSEVA-GEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV---- 166 (248)
T ss_dssp TCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS----
T ss_pred CCEEEEeCCCccHHHHHHHHhC-CEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC----
Confidence 4689999999999999999883 4999999999999999999887765 679999999887433567899999631
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.+...+++++.++|+|||++++.....
T Consensus 167 ----------------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 193 (248)
T 2yvl_A 167 ----------------REPWHYLEKVHKSLMEGAPVGFLLPTA 193 (248)
T ss_dssp ----------------SCGGGGHHHHHHHBCTTCEEEEEESSH
T ss_pred ----------------cCHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 122467899999999999999887643
No 187
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.48 E-value=1.5e-14 Score=112.60 Aligned_cols=102 Identities=17% Similarity=0.119 Sum_probs=83.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCC-CC-----CCceeEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLP-FS-----NDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~-~~-----~~~~D~v 71 (201)
+++|||+|||+|..+..++...+ .+|+++|+++.+++.+++++...+. ++++++++|+.... .. .++||+|
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V 140 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFI 140 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEE
T ss_pred cCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEE
Confidence 46899999999999999998632 3999999999999999999988775 47999999987532 11 4789999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++... ......+++++.++|+|||.+++...
T Consensus 141 ~~d~~------------------~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 141 FIDAD------------------KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp EEESC------------------GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred EEcCC------------------hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 97432 24567899999999999999997543
No 188
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.47 E-value=3.6e-13 Score=103.34 Aligned_cols=99 Identities=17% Similarity=0.172 Sum_probs=78.7
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC---CCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---FSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~v~~~~ 75 (201)
+.+|||+|||+|.++..+++. ++ .+|+++|+++.+++.++++.... +++.++++|+.... ...++||+|++..
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~ 151 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVIFEDV 151 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEEECC
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEEEECC
Confidence 468999999999999999977 43 39999999999999999887654 58999999998632 1235899999643
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
. .......+++++.++|+|||.+++.
T Consensus 152 ~-----------------~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 152 A-----------------QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp C-----------------STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred C-----------------CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 2 1123345699999999999998886
No 189
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.47 E-value=1.5e-13 Score=121.69 Aligned_cols=117 Identities=19% Similarity=0.217 Sum_probs=89.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCC--ceEEEEcccCC-CCCCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYK--EVKVLEADMLD-LPFSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~--~i~~~~~d~~~-~~~~~~~~D~v~~~~~l 77 (201)
|++|||+|||+|.++..++..+..+|+++|+|+.+++.+++++..+++. +++++++|+.+ ++...++||+|++....
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~ 619 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPT 619 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCS
T ss_pred CCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCcc
Confidence 5789999999999999999887768999999999999999999988865 79999999987 33335789999974321
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
..- +.. -...........+++..+.++|+|||.+++.+..
T Consensus 620 f~~---~~~-~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 620 FSN---SKR-MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp BC-----------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred ccC---Ccc-chhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 000 000 0000134467889999999999999999976654
No 190
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.47 E-value=8.4e-14 Score=114.72 Aligned_cols=98 Identities=22% Similarity=0.321 Sum_probs=82.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++ .++++++.+|+.+ +++. ||+|++..++|+
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~ 279 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-SVPQ--GDAMILKAVCHN 279 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCCC--EEEEEEESSGGG
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-CCCC--CCEEEEeccccc
Confidence 368999999999999999998765 8999999 888876653 2479999999987 5553 999999999987
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+ ..+...+++++++++|+|||++++.+..
T Consensus 280 ~-------------~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 280 W-------------SDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp S-------------CHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C-------------CHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 6 3345669999999999999999988654
No 191
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.46 E-value=4.1e-14 Score=103.58 Aligned_cols=103 Identities=24% Similarity=0.267 Sum_probs=79.4
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--------CCCCceeE
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~~D~ 70 (201)
+.+|||+|||+|.++..+++. ++ .+++++|+++ +++. +++.++++|+.+.+ ++.++||+
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~ 91 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI----------VGVDFLQGDFRDELVMKALLERVGDSKVQV 91 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC----------TTEEEEESCTTSHHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc----------CcEEEEEcccccchhhhhhhccCCCCceeE
Confidence 468999999999999999887 44 3999999998 6432 47899999998765 56679999
Q ss_pred EEeccccceeeecCCCCCCCCCccHHH------HHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTK------VMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
|+++..++.. +. ...+. ..++++++.++|+|||.+++..+..+.
T Consensus 92 i~~~~~~~~~----~~------~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 92 VMSDMAPNMS----GT------PAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp EEECCCCCCC----SC------HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred EEECCCcccc----CC------CccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 9998776543 00 01111 268999999999999999987765543
No 192
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.46 E-value=1.5e-13 Score=110.37 Aligned_cols=108 Identities=22% Similarity=0.300 Sum_probs=81.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhh----cCCCceEEEEcccCCCCC--CCCceeEEEe
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLL----KGYKEVKVLEADMLDLPF--SNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~----~~~~~i~~~~~d~~~~~~--~~~~~D~v~~ 73 (201)
+++|||+|||+|.++..+++... .+|+++|+++.+++.+++++.. ...++++++.+|+..... +.++||+|++
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~ 175 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVII 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEE
Confidence 46899999999999999998743 3999999999999999998742 123579999999876432 4678999998
Q ss_pred ccccceeeecCCCCCCCCCccHHHH--HHHHHHHhhcccCCcEEEEEecC
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
....+.. ....+ .++++++.++|+|||.+++...+
T Consensus 176 d~~~~~~-------------~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 176 DTTDPAG-------------PASKLFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp ECC----------------------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCCCccc-------------cchhhhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 5433211 01112 68999999999999999987543
No 193
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.46 E-value=2.1e-13 Score=110.84 Aligned_cols=102 Identities=18% Similarity=0.161 Sum_probs=78.8
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhcC-----------CCceEEEEcccCCC--CCCC
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKG-----------YKEVKVLEADMLDL--PFSN 65 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~~-----------~~~i~~~~~d~~~~--~~~~ 65 (201)
|.+|||+|||+|.++..++.. ++ .+|+++|+++.+++.+++++...+ ..++.++.+|+.+. +++.
T Consensus 106 g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~ 185 (336)
T 2b25_A 106 GDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKS 185 (336)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-----
T ss_pred CCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCC
Confidence 578999999999999999987 55 399999999999999999987521 25799999999875 4556
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
++||+|++... .|| .+++++.++|+|||.+++.....
T Consensus 186 ~~fD~V~~~~~---------~~~-----------~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 186 LTFDAVALDML---------NPH-----------VTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp --EEEEEECSS---------STT-----------TTHHHHGGGEEEEEEEEEEESSH
T ss_pred CCeeEEEECCC---------CHH-----------HHHHHHHHhcCCCcEEEEEeCCH
Confidence 78999997421 222 37899999999999999876543
No 194
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.46 E-value=1.7e-13 Score=113.86 Aligned_cols=116 Identities=14% Similarity=0.154 Sum_probs=88.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-C-ceEEEEcccCCCCC----CCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-K-EVKVLEADMLDLPF----SNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~-~i~~~~~d~~~~~~----~~~~~D~v~~~ 74 (201)
+++|||+|||+|.++..++..+..+|+++|+++.+++.+++++..+++ + ++.++++|+.+... ...+||+|++.
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~d 300 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMD 300 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEEC
Confidence 578999999999999999998766999999999999999999998887 5 89999999876421 14689999974
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
...... +.. .-.........++.++.+.|+|||.+++.+...
T Consensus 301 pP~~~~---~~~---~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 301 PPKFVE---NKS---QLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp CSSTTT---CSS---SSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCC---Chh---HHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 221000 000 000122567889999999999999999877654
No 195
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.46 E-value=7.8e-14 Score=106.04 Aligned_cols=87 Identities=29% Similarity=0.576 Sum_probs=73.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++ .+++++|+++. ++.++++|+.+++++.++||+|++..++|+
T Consensus 68 ~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~---------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~- 127 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR----NPVHCFDLASL---------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG- 127 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC----SCEEEEESSCS---------------STTEEESCTTSCSCCTTCEEEEEEESCCCS-
T ss_pred CCeEEEECCcCCHHHHHhh----ccEEEEeCCCC---------------CceEEEeccccCCCCCCCEeEEEEehhccc-
Confidence 3689999999999988773 38999999886 457789999888887889999999887752
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.+...+++++.++|+|||.+++.++..
T Consensus 128 ---------------~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 128 ---------------TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp ---------------SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred ---------------cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 356789999999999999999887654
No 196
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.46 E-value=6.3e-13 Score=102.64 Aligned_cols=100 Identities=16% Similarity=0.073 Sum_probs=73.8
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC---CCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---FSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~v~~~~ 75 (201)
|.+|||+|||+|.++..++.. +.. +|+++|+++.+++.+.+..... .++.++.+|+.... ...++||+|++..
T Consensus 77 g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~ 154 (232)
T 3id6_C 77 GTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDVLYVDI 154 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEEEECC
T ss_pred CCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEEEEecC
Confidence 578999999999999999876 433 9999999999876665544433 48999999987632 1246899999764
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.. ......+...+.+.|||||++++..
T Consensus 155 a~-----------------~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 155 AQ-----------------PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp CC-----------------TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CC-----------------hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 32 1223344556667999999998763
No 197
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.46 E-value=1.4e-13 Score=106.52 Aligned_cols=101 Identities=18% Similarity=0.206 Sum_probs=82.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCC-C--------------
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL-P-------------- 62 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~-~-------------- 62 (201)
+.+|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...+.. ++.++.+|+... +
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~ 140 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASD 140 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccccccc
Confidence 46899999999999999998742 39999999999999999998877754 499999997642 1
Q ss_pred CCC--CceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 63 FSN--DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 63 ~~~--~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
++. ++||+|++.... .....+++++.++|+|||.+++..
T Consensus 141 f~~~~~~fD~I~~~~~~------------------~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 141 FAFGPSSIDLFFLDADK------------------ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp TCCSTTCEEEEEECSCG------------------GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCCCcCEEEEeCCH------------------HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 222 789999975332 455788999999999999999865
No 198
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.45 E-value=2.6e-13 Score=102.01 Aligned_cols=108 Identities=10% Similarity=0.198 Sum_probs=75.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCC---CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC---------------
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI---TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------------- 62 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~---~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------------- 62 (201)
+.+|||+|||+|.++..+++..+ .+|+++|+++.. ..+++.++++|+.+.+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~ 91 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNN 91 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC-----------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhccccccccccc
Confidence 35899999999999999998743 399999999831 1357899999998765
Q ss_pred ----------CCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 63 ----------FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 63 ----------~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
++.++||+|+++..++..- .+..+.........++++++.++|+|||.+++..+..+
T Consensus 92 ~~~~~~~~~~~~~~~fD~v~~~~~~~~~g----~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 158 (201)
T 2plw_A 92 NSVDYKLKEILQDKKIDIILSDAAVPCIG----NKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGS 158 (201)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCCCCCS----CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECST
T ss_pred hhhHHHHHhhcCCCcccEEEeCCCcCCCC----CcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCC
Confidence 4567899999977665420 00000000001123588999999999999998766543
No 199
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.45 E-value=1.5e-13 Score=107.29 Aligned_cols=101 Identities=12% Similarity=0.103 Sum_probs=82.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCC-C-C-----CCCceeE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDL-P-F-----SNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~-~-~-----~~~~~D~ 70 (201)
+++|||+|||+|..+..++...+ .+|+++|+++.+++.+++++...+. ++++++.+|+... + + ..++||+
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 159 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDF 159 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSE
T ss_pred cCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEE
Confidence 46899999999999999988732 3999999999999999999987775 4799999998653 2 1 1478999
Q ss_pred EEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
|++... ......+++++.++|+|||.+++..
T Consensus 160 V~~d~~------------------~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 160 IFVDAD------------------KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp EEECSC------------------STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEcCc------------------hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 997432 1356789999999999999998753
No 200
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.45 E-value=2e-13 Score=111.68 Aligned_cols=98 Identities=14% Similarity=0.216 Sum_probs=81.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++ .++++++.+|+.. +++ .||+|++..++|+
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~p--~~D~v~~~~~lh~ 258 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-SIP--NADAVLLKYILHN 258 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-CCC--CCSEEEEESCGGG
T ss_pred CceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-CCC--CccEEEeehhhcc
Confidence 368999999999999999987554 8999999 988877654 2469999999976 554 3999999999987
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccC---CcEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP---DGLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~ 121 (201)
+ ......+++++++++|+| ||++++.+..
T Consensus 259 ~-------------~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 290 (352)
T 1fp2_A 259 W-------------TDKDCLRILKKCKEAVTNDGKRGKVTIIDMV 290 (352)
T ss_dssp S-------------CHHHHHHHHHHHHHHHSGGGCCCEEEEEECE
T ss_pred C-------------CHHHHHHHHHHHHHhCCCCCCCcEEEEEEee
Confidence 6 334566999999999999 9999988754
No 201
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.45 E-value=1.4e-13 Score=105.74 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=80.5
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC------CeEEEEECCHHHHHHHHHHHhhcC-----CCceEEEEcccCCCCCCC-Cc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI------TAITCIDLSAVAVEKMQERLLLKG-----YKEVKVLEADMLDLPFSN-DC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~------~~v~~vD~~~~~~~~~~~~~~~~~-----~~~i~~~~~d~~~~~~~~-~~ 67 (201)
+.+|||+|||+|.++..+++. +. .+|+++|+++.+++.+++++...+ .+++.++.+|+.. +++. ++
T Consensus 85 ~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~ 163 (227)
T 1r18_A 85 GARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAP 163 (227)
T ss_dssp TCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCS
T ss_pred CCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCC
Confidence 468999999999999999885 32 389999999999999999887654 4589999999887 3333 68
Q ss_pred eeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 68 FDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 68 ~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
||+|++...++++ .+++.+.|+|||++++....
T Consensus 164 fD~I~~~~~~~~~---------------------~~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 164 YNAIHVGAAAPDT---------------------PTELINQLASGGRLIVPVGP 196 (227)
T ss_dssp EEEEEECSCBSSC---------------------CHHHHHTEEEEEEEEEEESC
T ss_pred ccEEEECCchHHH---------------------HHHHHHHhcCCCEEEEEEec
Confidence 9999988777544 25788999999999987643
No 202
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.45 E-value=3.3e-13 Score=113.94 Aligned_cols=122 Identities=19% Similarity=0.262 Sum_probs=89.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--CCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~v~~~~~ 76 (201)
|.+|||+|||+|..+..++.... .+|+++|+++.+++.+++++...+.+++.++++|+...+ ++.++||+|++...
T Consensus 260 g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~P 339 (450)
T 2yxl_A 260 GETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAP 339 (450)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECC
T ss_pred cCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCC
Confidence 46899999999999999988632 399999999999999999999888878999999998765 44478999996321
Q ss_pred ---cceeeecCCCCCCCCCccHHH----HHHHHHHHhhcccCCcEEEEEecCC
Q 028957 77 ---MEVLFVNSGDPWNPQPETVTK----VMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 77 ---l~~~~~~~~~~~~~~~~~~~~----~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
...+-.+.+..|...+..... ..++++++.++|||||++++.+++.
T Consensus 340 csg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 340 CTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp CCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred CCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 111100111112111222211 2678999999999999999887764
No 203
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.45 E-value=9.4e-13 Score=99.45 Aligned_cols=97 Identities=22% Similarity=0.256 Sum_probs=77.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.++++....+. ++.++++|+.+++ .+||+|+++..++..
T Consensus 50 ~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 125 (207)
T 1wy7_A 50 GKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN---SRVDIVIMNPPFGSQ 125 (207)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC---CCCSEEEECCCCSSS
T ss_pred cCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC---CCCCEEEEcCCCccc
Confidence 468999999999999999988766899999999999999999887776 8999999998863 489999987665433
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
.......+++++.+++ |+.++
T Consensus 126 -------------~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 126 -------------RKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp -------------STTTTHHHHHHHHHHC--SEEEE
T ss_pred -------------cCCchHHHHHHHHHhc--CcEEE
Confidence 1122356788888888 45443
No 204
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=2.1e-13 Score=109.66 Aligned_cols=109 Identities=20% Similarity=0.239 Sum_probs=83.6
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC--CCCCCceeEEEeccccc
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL--PFSNDCFDVVIEKATME 78 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~D~v~~~~~l~ 78 (201)
.+|||||||+|.++..+++..+. +++++|+++.+++.+++++....-++++++.+|+... ..+.++||+|++....+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~ 170 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAG 170 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTT
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCc
Confidence 38999999999999999985333 9999999999999999988654446899999998764 34467899999753322
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+.. +.+ -....+++.++++|+|||.+++....
T Consensus 171 ---------~~~-~~~-L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 171 ---------AIT-PQN-FTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp ---------SCC-CGG-GSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ---------ccc-chh-hhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 110 001 11268999999999999999887654
No 205
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.44 E-value=6.9e-13 Score=99.80 Aligned_cols=88 Identities=22% Similarity=0.299 Sum_probs=70.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..++..+..+|+++|+++.+++.++++.. +++++++|+..++ ++||+|+++..+|+.
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~---~~~D~v~~~~p~~~~ 123 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS---GKYDTWIMNPPFGSV 123 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC---CCEEEEEECCCC---
T ss_pred CCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC---CCeeEEEECCCchhc
Confidence 46899999999999999998865589999999999999998864 6899999998864 689999998877765
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcc
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVL 109 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 109 (201)
......++++++.+.+
T Consensus 124 -------------~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 124 -------------VKHSDRAFIDKAFETS 139 (200)
T ss_dssp -----------------CHHHHHHHHHHE
T ss_pred -------------cCchhHHHHHHHHHhc
Confidence 1122357888888888
No 206
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.44 E-value=6.4e-14 Score=111.45 Aligned_cols=95 Identities=9% Similarity=0.203 Sum_probs=71.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEE-EcccCCCC---CCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVL-EADMLDLP---FSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~-~~d~~~~~---~~~~~~D~v~~~~~ 76 (201)
|.+|||+|||||.++..+++.+..+|+++|+++.|++.+.++- +++... ..|+..+. ++..+||+|++..+
T Consensus 86 g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~-----~rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~s 160 (291)
T 3hp7_A 86 DMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD-----DRVRSMEQYNFRYAEPVDFTEGLPSFASIDVS 160 (291)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC-----TTEEEECSCCGGGCCGGGCTTCCCSEEEECCS
T ss_pred ccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC-----cccceecccCceecchhhCCCCCCCEEEEEee
Confidence 4689999999999999999987779999999999998754321 233222 23443332 34446999998776
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
++.+ ..++.++.++|+|||.+++.
T Consensus 161 f~sl------------------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 161 FISL------------------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp SSCG------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred HhhH------------------HHHHHHHHHHcCcCCEEEEE
Confidence 6533 67999999999999999887
No 207
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.43 E-value=3.2e-13 Score=106.30 Aligned_cols=110 Identities=15% Similarity=0.148 Sum_probs=82.8
Q ss_pred CcEEEecCCC--ChhhHHHHhc-CCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----CC--CCcee--
Q 028957 2 TSVLELGCGN--SRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FS--NDCFD-- 69 (201)
Q Consensus 2 ~~vLDlG~G~--G~~~~~l~~~-~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~--~~~~D-- 69 (201)
.+|||||||+ +..+..+++. .+. +|+++|.|+.|+..+++++......++.++++|+.+.. .+ ...||
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~ 159 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLT 159 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcC
Confidence 4799999997 4445555543 333 99999999999999999887644347999999998742 01 23454
Q ss_pred ---EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 70 ---VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 70 ---~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
.|+++.+||++ ...++...+++++.+.|+|||+|++......
T Consensus 160 ~p~av~~~avLH~l------------~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 160 RPVALTVIAIVHFV------------LDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp SCCEEEEESCGGGS------------CGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred CcchHHhhhhHhcC------------CchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 68889999988 1223367899999999999999998876653
No 208
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.43 E-value=2.6e-13 Score=109.46 Aligned_cols=110 Identities=19% Similarity=0.250 Sum_probs=82.7
Q ss_pred CCcEEEecCCCChhhHHHHhcC-CCeEEEEECCHHHHHHHHHHHhh--cC---CCceEEEEcccCC-CCCCCCceeEEEe
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-ITAITCIDLSAVAVEKMQERLLL--KG---YKEVKVLEADMLD-LPFSNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~~~~~~~~--~~---~~~i~~~~~d~~~-~~~~~~~~D~v~~ 73 (201)
+++|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++.. .+ .++++++.+|+.. ++...++||+|++
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVII 157 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEE
Confidence 4689999999999999999874 33999999999999999998754 11 3589999999876 3334578999998
Q ss_pred ccccceeeecCCCCC-CCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 74 KATMEVLFVNSGDPW-NPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.... |+ ...+.......++++++.++|+|||.+++..
T Consensus 158 d~~~---------~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 158 DLTD---------PVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp ECCC---------CBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCC---------cccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 5432 22 0000011114789999999999999998764
No 209
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.43 E-value=9e-14 Score=108.51 Aligned_cols=78 Identities=10% Similarity=0.112 Sum_probs=63.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCC---CCC---CCceeEEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL---PFS---NDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~---~~~---~~~~D~v~ 72 (201)
+.+|||+|||+|.++..++...+ .+|+++|+++.+++.+++++...+.. +++++++|+.+. +++ +++||+|+
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~ 145 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCM 145 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEE
T ss_pred CCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEE
Confidence 35899999999999998887632 39999999999999999999887754 499999997652 333 25899999
Q ss_pred eccccc
Q 028957 73 EKATME 78 (201)
Q Consensus 73 ~~~~l~ 78 (201)
++..++
T Consensus 146 ~npp~~ 151 (254)
T 2h00_A 146 CNPPFF 151 (254)
T ss_dssp ECCCCC
T ss_pred ECCCCc
Confidence 976554
No 210
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.43 E-value=7.3e-13 Score=102.25 Aligned_cols=102 Identities=16% Similarity=0.104 Sum_probs=82.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCC----CCCC--CceeEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDL----PFSN--DCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~----~~~~--~~~D~v 71 (201)
+++|||+|||+|..+..++...+ .+|+++|+++.+++.+++++...+. +++.++.+|+... +... ++||+|
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V 152 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLI 152 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEE
Confidence 46899999999999999998743 2999999999999999999887765 4699999997542 2222 689999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++... ......+++++.++|+|||.+++...
T Consensus 153 ~~d~~------------------~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 153 FIDAD------------------KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp EECSC------------------GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred EECCC------------------HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 97432 24567899999999999999997543
No 211
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.43 E-value=4.8e-13 Score=110.94 Aligned_cols=110 Identities=16% Similarity=0.165 Sum_probs=84.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-CCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-FSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~v~~~~~l~~ 79 (201)
|++|||+|||+|.++..++..+. .|+++|+|+.+++.+++++..++.. ..+.++|+.+.. ...+.||+|+++.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~-~~~~~~D~~~~l~~~~~~fD~Ii~dp---- 288 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLR-VDIRHGEALPTLRGLEGPFHHVLLDP---- 288 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCC-CEEEESCHHHHHHTCCCCEEEEEECC----
T ss_pred CCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCC-CcEEEccHHHHHHHhcCCCCEEEECC----
Confidence 57899999999999999999887 5999999999999999999888764 467799987632 1123499999742
Q ss_pred eeecCCCCCCC-CCc----cHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 80 LFVNSGDPWNP-QPE----TVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 80 ~~~~~~~~~~~-~~~----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
|... ... ......++++.+.++|+|||.+++.+++..
T Consensus 289 -------P~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 289 -------PTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp -------CCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred -------CcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 2211 111 123457889999999999999997776654
No 212
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.43 E-value=2.7e-13 Score=103.99 Aligned_cols=101 Identities=16% Similarity=0.150 Sum_probs=81.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCC--CCC----CCceeEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDL--PFS----NDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~--~~~----~~~~D~v 71 (201)
+++|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++...+. ++++++.+|+... .+. .++||+|
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v 149 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVA 149 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEE
Confidence 46899999999999999998732 3999999999999999999887765 5799999998653 111 1689999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
++... ......+++++.++|+|||.+++..
T Consensus 150 ~~d~~------------------~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 150 VVDAD------------------KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EECSC------------------STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCC------------------HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 97432 1455789999999999999998754
No 213
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.43 E-value=4.9e-13 Score=113.49 Aligned_cols=121 Identities=16% Similarity=0.184 Sum_probs=88.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC-CCCceeEEEeccc-
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF-SNDCFDVVIEKAT- 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~v~~~~~- 76 (201)
|.+|||+|||+|..+..++.... ..|+++|+++.+++.+++++...++.++.++++|+..++. ..++||+|++...
T Consensus 118 g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~Pc 197 (479)
T 2frx_A 118 PQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPC 197 (479)
T ss_dssp CSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCC
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCc
Confidence 46899999999999999998632 3999999999999999999998888789999999987542 3578999997321
Q ss_pred --cceeeecCCCCCCCCCccH----HHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 77 --MEVLFVNSGDPWNPQPETV----TKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 77 --l~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
...+-.+.+..|.-.++.. ....++++++.++|||||++++.+++
T Consensus 198 Sg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 198 SGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp CCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred CCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 1111011111111111111 12457899999999999999988765
No 214
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.43 E-value=8.3e-14 Score=104.63 Aligned_cols=108 Identities=19% Similarity=0.227 Sum_probs=75.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC--------C---CCcee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF--------S---NDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--------~---~~~~D 69 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++. ...+++.++++|+.+.+. . .++||
T Consensus 26 g~~VLDlG~G~G~~s~~la~~~~-~V~gvD~~~~-----------~~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D 93 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSLAR-KIISIDLQEM-----------EEIAGVRFIRCDIFKETIFDDIDRALREEGIEKVD 93 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTTCS-EEEEEESSCC-----------CCCTTCEEEECCTTSSSHHHHHHHHHHHHTCSSEE
T ss_pred CCEEEEEeecCCHHHHHHHHcCC-cEEEEecccc-----------ccCCCeEEEEccccCHHHHHHHHHHhhcccCCcce
Confidence 47899999999999999998844 9999999874 123589999999987541 1 14899
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
+|+++...... +.+..+..........+++.+.++|+|||.+++..+..+.
T Consensus 94 ~Vlsd~~~~~~----g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~ 144 (191)
T 3dou_A 94 DVVSDAMAKVS----GIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDM 144 (191)
T ss_dssp EEEECCCCCCC----SCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTH
T ss_pred EEecCCCcCCC----CCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCC
Confidence 99986533211 0000000011223467889999999999999988876554
No 215
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.42 E-value=1.7e-13 Score=113.43 Aligned_cols=111 Identities=21% Similarity=0.263 Sum_probs=87.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC----CCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF----SNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~D~v~~~~~ 76 (201)
+++|||+|||+|.++..++.. ..+|+++|+++.+++.+++++..++..++.++++|+.+... ...+||+|++...
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP 288 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPP 288 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCC
T ss_pred CCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCC
Confidence 358999999999999999988 44999999999999999999998887779999999876421 1468999997322
Q ss_pred cceeeecCCCCCCCCC----ccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 77 MEVLFVNSGDPWNPQP----ETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
. |.... ........++..+.++|+|||.+++.+++.
T Consensus 289 ~----------~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 328 (382)
T 1wxx_A 289 A----------FAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSH 328 (382)
T ss_dssp C----------SCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred C----------CCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1 00101 112456789999999999999999887654
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.42 E-value=3.7e-13 Score=109.38 Aligned_cols=107 Identities=19% Similarity=0.309 Sum_probs=81.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhc--C--CCceEEEEcccCCC--CCCCCceeEEEe
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLK--G--YKEVKVLEADMLDL--PFSNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~--~--~~~i~~~~~d~~~~--~~~~~~~D~v~~ 73 (201)
+++|||+|||+|.++..+++... .+|+++|+++.+++.+++++... + -++++++.+|+... ..+.++||+|++
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~ 200 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIV 200 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEE
T ss_pred CCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEE
Confidence 46899999999999999998743 39999999999999999987642 1 25899999998763 234578999997
Q ss_pred ccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
... +|+.. ........+++++.++|+|||.+++.
T Consensus 201 d~~---------~p~~~--~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 201 DSS---------DPIGP--AKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp CCC---------CTTSG--GGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC---------CccCc--chhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 432 22211 01111478999999999999999975
No 217
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.42 E-value=6.2e-13 Score=105.24 Aligned_cols=100 Identities=13% Similarity=0.145 Sum_probs=82.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
|.+|||+|||+|.++..++..+..+|+++|+++.+++.+++|++.+++ +++.++++|+.++.. .+.||.|+++...
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-~~~~D~Vi~~~p~-- 202 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYVV-- 202 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCCS--
T ss_pred CCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-ccCCCEEEECCCC--
Confidence 578999999999999999998766999999999999999999999885 458999999988653 4789999864221
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
....++..+.+.|++||.+.+.++
T Consensus 203 -----------------~~~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 203 -----------------RTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp -----------------SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred -----------------cHHHHHHHHHHHcCCCCEEEEEee
Confidence 123567777889999999876554
No 218
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.42 E-value=3.6e-13 Score=107.14 Aligned_cols=107 Identities=20% Similarity=0.285 Sum_probs=82.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcC----CCceEEEEcccCCC-CCCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKG----YKEVKVLEADMLDL-PFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~----~~~i~~~~~d~~~~-~~~~~~~D~v~~~ 74 (201)
+++|||+|||+|..+..+++..+ .+++++|+++.+++.+++++...+ .++++++.+|+... +...++||+|++.
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 158 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 158 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEc
Confidence 46899999999999999998753 399999999999999999876432 35899999998763 2225789999974
Q ss_pred cccceeeecCCCCCCCCCccHHHH--HHHHHHHhhcccCCcEEEEEec
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.. +|+. ..... ..+++.+.+.|+|||.+++...
T Consensus 159 ~~---------~~~~----~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 159 SS---------DPIG----PAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp CC---------CTTT----GGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred CC---------CCCC----cchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 32 2221 11222 6899999999999999997754
No 219
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.42 E-value=5.3e-13 Score=106.78 Aligned_cols=111 Identities=18% Similarity=0.212 Sum_probs=81.1
Q ss_pred CCcEEEecCCCChhhHHHHhcC-CCeEEEEECCHHHHHHHHHHHhh----cCCCceEEEEcccCC-CCCCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-ITAITCIDLSAVAVEKMQERLLL----KGYKEVKVLEADMLD-LPFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~~~~~~~~----~~~~~i~~~~~d~~~-~~~~~~~~D~v~~~ 74 (201)
+.+|||+|||+|..+..+++.. ..+|+++|+++.+++.+++++.. ...++++++.+|+.. ++...++||+|++.
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d 170 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIID 170 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEc
Confidence 4689999999999999999873 34999999999999999998753 113589999999875 33335789999974
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.. +||.... ......++++++.+.|+|||.+++...+
T Consensus 171 ~~---------~~~~~~~-~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 207 (296)
T 1inl_A 171 ST---------DPTAGQG-GHLFTEEFYQACYDALKEDGVFSAETED 207 (296)
T ss_dssp C--------------------CCSHHHHHHHHHHEEEEEEEEEECCC
T ss_pred CC---------CcccCch-hhhhHHHHHHHHHHhcCCCcEEEEEccC
Confidence 32 1221100 0012368999999999999999987543
No 220
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.42 E-value=3.1e-13 Score=107.37 Aligned_cols=104 Identities=17% Similarity=0.307 Sum_probs=79.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc-----------CCCceEEEEcccCCC-CCCCCce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK-----------GYKEVKVLEADMLDL-PFSNDCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~-----------~~~~i~~~~~d~~~~-~~~~~~~ 68 (201)
+++|||+|||+|.++..+++.+..+|+++|+++.+++.+++++ .. ..++++++.+|+... .. .++|
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~f 153 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGF 153 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCCe
Confidence 4689999999999999999884449999999999999999987 32 235799999998652 22 5789
Q ss_pred eEEEeccccceeeecCCCCCCCCCccHHH--HHHHHHHHhhcccCCcEEEEEe
Q 028957 69 DVVIEKATMEVLFVNSGDPWNPQPETVTK--VMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
|+|++... +|+.+ ... ...+++++.++|+|||.+++..
T Consensus 154 D~Ii~d~~---------~~~~~----~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 154 DVIIADST---------DPVGP----AKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp EEEEEECC---------CCC---------TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCC---------CCCCc----chhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99997432 22211 112 3688999999999999998764
No 221
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.42 E-value=6.7e-13 Score=102.83 Aligned_cols=101 Identities=17% Similarity=0.127 Sum_probs=82.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCC-C-C-----CCCceeE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDL-P-F-----SNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~-~-~-----~~~~~D~ 70 (201)
+++|||+|||+|..+..+++..+ .+++++|+++.+++.+++++...+.. +++++.+|+... + + +.++||+
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~ 150 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDF 150 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCE
Confidence 46899999999999999998732 39999999999999999999877754 699999998753 2 1 2478999
Q ss_pred EEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
|++... ......+++.+.++|+|||.+++..
T Consensus 151 I~~d~~------------------~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 151 GFVDAD------------------KPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEECSC------------------GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEECCc------------------hHHHHHHHHHHHHhcCCCeEEEEec
Confidence 996421 2456789999999999999988754
No 222
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.41 E-value=5.7e-13 Score=108.41 Aligned_cols=99 Identities=14% Similarity=0.211 Sum_probs=82.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
|.+|||+|||+|.++.. +. +..+|+++|+++.+++.+++++..++. +++.++++|+.+.. ++||+|+++..
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP--- 267 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLP--- 267 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCT---
T ss_pred CCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCc---
Confidence 46899999999999999 77 445999999999999999999998886 57999999998764 78999997321
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
.....+++.+.++|+|||.+++.++...
T Consensus 268 ----------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 268 ----------------KFAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ----------------TTGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ----------------HhHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 1123788899999999999998776653
No 223
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.41 E-value=4.5e-13 Score=106.12 Aligned_cols=109 Identities=21% Similarity=0.319 Sum_probs=82.4
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhh----cCCCceEEEEcccCC-CCCCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLL----KGYKEVKVLEADMLD-LPFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~----~~~~~i~~~~~d~~~-~~~~~~~~D~v~~~ 74 (201)
+++|||+|||+|.++..+++. +..+|+++|+++.+++.+++++.. ...++++++.+|+.. ++...++||+|++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d 155 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVD 155 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEES
T ss_pred CCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEEC
Confidence 468999999999999999987 445999999999999999998753 123589999999875 33335789999974
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
... |+.+.. + -....+++++.+.|+|||.+++...
T Consensus 156 ~~~---------~~~~~~-~-l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 156 STE---------PVGPAV-N-LFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp CSS---------CCSCCC-C-CSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CCC---------CCCcch-h-hhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 322 221110 0 1125789999999999999988753
No 224
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.41 E-value=4.3e-13 Score=107.72 Aligned_cols=109 Identities=17% Similarity=0.242 Sum_probs=80.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhc--C--CCceEEEEcccCC-CCCCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLK--G--YKEVKVLEADMLD-LPFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~--~--~~~i~~~~~d~~~-~~~~~~~~D~v~~~ 74 (201)
+++|||+|||+|..+..+++... .+|+++|+++.+++.+++++... + .++++++.+|+.. ++...++||+|++.
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d 175 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITD 175 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEEC
Confidence 46899999999999999998853 49999999999999999987641 1 3589999999875 33345789999975
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
... |+.+. .......+++++.++|+|||.+++...
T Consensus 176 ~~~---------~~~~~--~~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 176 SSD---------PMGPA--ESLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp CC----------------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCC---------CCCcc--hhhhHHHHHHHHHhccCCCeEEEEecC
Confidence 332 22110 011235789999999999999987653
No 225
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.40 E-value=3.9e-13 Score=113.36 Aligned_cols=120 Identities=17% Similarity=0.137 Sum_probs=87.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-CCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-FSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~v~~~~~l 77 (201)
|.+|||+|||+|..+..++.... ..|+++|+++.+++.+++++...++. +.++++|+..++ ...++||+|++....
T Consensus 102 g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 102 GERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLDAPC 180 (464)
T ss_dssp TCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEECCC
T ss_pred CCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEECCCc
Confidence 57899999999999999997632 38999999999999999999988877 999999987754 235789999963211
Q ss_pred ---ceeeecCCCCCCCCCccHH----HHHHHHHHHhhcccCCcEEEEEecC
Q 028957 78 ---EVLFVNSGDPWNPQPETVT----KVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 78 ---~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
..+-.+.+..|...+.... ...++++++.++|||||++++.+++
T Consensus 181 Sg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 181 SGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp CCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESC
T ss_pred CCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 1110111111111111221 2378999999999999999987765
No 226
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.40 E-value=2.4e-13 Score=105.38 Aligned_cols=96 Identities=15% Similarity=0.198 Sum_probs=75.3
Q ss_pred CCcEEEecCCCChhhHHHHhc----CCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC---CC-CCCceeEE
Q 028957 1 MTSVLELGCGNSRLSEGLYND----GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL---PF-SNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~----~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~-~~~~~D~v 71 (201)
+.+|||+|||+|..+..+++. ++. +|+++|+++.+++.++. . .++++++++|+... +. ...+||+|
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~-~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D-MENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G-CTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c-CCceEEEECcchhHHHHHhhccCCCCEE
Confidence 468999999999999999886 333 99999999999887761 1 25899999999874 43 23479999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhh-cccCCcEEEEEe
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHR-VLKPDGLFISVS 119 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~L~~gG~l~~~~ 119 (201)
++... | .+..+++.++.+ +|+|||++++.+
T Consensus 157 ~~d~~-~-----------------~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 157 FIDNA-H-----------------ANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEESS-C-----------------SSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred EECCc-h-----------------HhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 97443 1 245678999997 999999999864
No 227
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.40 E-value=4.7e-12 Score=100.70 Aligned_cols=114 Identities=13% Similarity=0.141 Sum_probs=81.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCCCCCCce---eEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLPFSNDCF---DVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~---D~v~~~~ 75 (201)
+.+|||+|||+|.++..++.. +. +|+++|+|+.+++.++++....+.. ++.++++|+... ++ ++| |+|+++.
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~IvsnP 200 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSNP 200 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEECC
T ss_pred CCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEcC
Confidence 368999999999999999988 43 9999999999999999999888765 499999999873 22 578 9999863
Q ss_pred ccceeeecCCCCCCCCCccH------HHHHHHHHHHh-hcccCCcEEEEEe
Q 028957 76 TMEVLFVNSGDPWNPQPETV------TKVMAMLEGVH-RVLKPDGLFISVS 119 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~------~~~~~~l~~~~-~~L~~gG~l~~~~ 119 (201)
.+...-. ...|... -+.. .+...+++++. +.|+|||.+++..
T Consensus 201 Pyi~~~~-~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 201 PYVKSSA-HLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp CCBCGGG-SCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred CCCCccc-ccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 3211000 0000000 0000 01126899999 9999999998754
No 228
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.39 E-value=7.6e-13 Score=108.42 Aligned_cols=97 Identities=15% Similarity=0.245 Sum_probs=81.1
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
.+|||+|||+|.++..+++..+. +++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++..++|++
T Consensus 195 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~ 264 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SIP--SADAVLLKWVLHDW 264 (358)
T ss_dssp SEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CCC--CCSEEEEESCGGGS
T ss_pred CEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CCC--CceEEEEcccccCC
Confidence 68999999999999999988665 8999999 777766543 2469999999987 554 49999999999876
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccC---CcEEEEEecC
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKP---DGLFISVSFG 121 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~---gG~l~~~~~~ 121 (201)
..+...+++++++++|+| ||++++.+..
T Consensus 265 -------------~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~ 295 (358)
T 1zg3_A 265 -------------NDEQSLKILKNSKEAISHKGKDGKVIIIDIS 295 (358)
T ss_dssp -------------CHHHHHHHHHHHHHHTGGGGGGCEEEEEECE
T ss_pred -------------CHHHHHHHHHHHHHhCCCCCCCcEEEEEEec
Confidence 334566999999999999 9999987754
No 229
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.39 E-value=6.9e-13 Score=107.27 Aligned_cols=108 Identities=20% Similarity=0.318 Sum_probs=82.6
Q ss_pred CCcEEEecCCCChhhHHHHhcC-CCeEEEEECCHHHHHHHHHHHhhc--C--CCceEEEEcccCCC-CCCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG-ITAITCIDLSAVAVEKMQERLLLK--G--YKEVKVLEADMLDL-PFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~-~~~v~~vD~~~~~~~~~~~~~~~~--~--~~~i~~~~~d~~~~-~~~~~~~D~v~~~ 74 (201)
+.+|||+|||+|.++..+++.. ..+|+++|+++.+++.+++++... + .++++++.+|+... +...++||+|+++
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d 196 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVD 196 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEEC
Confidence 4689999999999999999873 349999999999999999987652 1 25799999998752 2235789999974
Q ss_pred cccceeeecCCCCCCCCCccHHHH--HHHHHHHhhcccCCcEEEEEecC
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.. +|+. ..... .++++++.+.|+|||.+++...+
T Consensus 197 ~~---------~p~~----~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 197 SS---------DPIG----PAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp CC---------CSSS----GGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred Cc---------CCCC----cchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 31 2321 11122 78999999999999999986543
No 230
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.39 E-value=1.2e-12 Score=104.27 Aligned_cols=75 Identities=20% Similarity=0.351 Sum_probs=64.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++....+. ++++++++|+.+.+++ +||+|+++..++
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy~ 104 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLPYQ 104 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECCGG
T ss_pred CCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecCcc
Confidence 46899999999999999999876 999999999999999998866543 5799999999887654 799999976654
No 231
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.39 E-value=4.4e-13 Score=108.05 Aligned_cols=106 Identities=21% Similarity=0.345 Sum_probs=78.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhc--C--CCceEEEEcccCC-CCCCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLK--G--YKEVKVLEADMLD-LPFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~--~--~~~i~~~~~d~~~-~~~~~~~~D~v~~~ 74 (201)
+++|||+|||+|..+..+++..+ .+|+++|+++.+++.+++++... + .++++++.+|+.. ++...++||+|++.
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d 188 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITD 188 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEEC
T ss_pred CCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEc
Confidence 46899999999999999998743 39999999999999999987643 1 3579999999875 23345789999975
Q ss_pred cccceeeecCCCCCCCCCccHHH-H-HHHHHHHhhcccCCcEEEEEe
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTK-V-MAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~-~-~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.. +|+.+ ... . ..+++++.++|+|||.+++..
T Consensus 189 ~~---------~~~~~----~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 189 SS---------DPVGP----AESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CC--------------------------HHHHHHHHEEEEEEEEEEC
T ss_pred CC---------CCCCc----chhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 42 12211 111 1 689999999999999999764
No 232
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.38 E-value=9.7e-13 Score=110.40 Aligned_cols=121 Identities=13% Similarity=0.205 Sum_probs=87.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--CCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~D~v~~~~~l 77 (201)
|.+|||+|||+|..+..++..+. .+|+++|+++.+++.+++++...+. ++.++++|+...+ ++.++||+|++....
T Consensus 247 g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~-~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pc 325 (429)
T 1sqg_A 247 GEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGM-KATVKQGDGRYPSQWCGEQQFDRILLDAPC 325 (429)
T ss_dssp TCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTC-CCEEEECCTTCTHHHHTTCCEEEEEEECCC
T ss_pred cCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCC-CeEEEeCchhhchhhcccCCCCEEEEeCCC
Confidence 46899999999999999998765 3999999999999999999988776 5789999998764 445789999963211
Q ss_pred ---ceeeecCCCCCCCCCccHH----HHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 78 ---EVLFVNSGDPWNPQPETVT----KVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 78 ---~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
..+-.+++..|...+.... ...++++++.++|||||++++.+++.
T Consensus 326 sg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 326 SATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp CCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred CcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 1110000111111111111 13688999999999999999987654
No 233
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.37 E-value=3.3e-13 Score=111.14 Aligned_cols=96 Identities=20% Similarity=0.317 Sum_probs=75.4
Q ss_pred CCcEEEecCC------CChhhHHHHhc-CCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCC------CC
Q 028957 1 MTSVLELGCG------NSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFS------ND 66 (201)
Q Consensus 1 ~~~vLDlG~G------~G~~~~~l~~~-~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~------~~ 66 (201)
+.+||||||| +|..+..+++. .+. +|+++|+++.+. . ..++++++++|+.++++. .+
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~-------~--~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH-------V--DELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG-------G--CBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh-------h--cCCCcEEEEecccccchhhhhhcccC
Confidence 4689999999 67777777654 233 999999999862 1 235899999999887655 58
Q ss_pred ceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 67 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 67 ~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+||+|++... |+. .+..+++++++++|||||.+++.+..
T Consensus 288 sFDlVisdgs-H~~---------------~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 288 PFDIVIDDGS-HIN---------------AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp CEEEEEECSC-CCH---------------HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred CccEEEECCc-ccc---------------hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 9999998653 332 67789999999999999999987654
No 234
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.37 E-value=1.3e-12 Score=97.78 Aligned_cols=108 Identities=16% Similarity=0.220 Sum_probs=75.2
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC---------CeEEEEECCHHHHHHHHHHHhhcCCCceEEE-EcccCCCC-------
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI---------TAITCIDLSAVAVEKMQERLLLKGYKEVKVL-EADMLDLP------- 62 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~---------~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~-~~d~~~~~------- 62 (201)
+.+|||+|||+|.++..+++. +. .+|+++|+++.. ..+++.++ .+|+....
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHHHHH
Confidence 468999999999999999987 42 489999999831 13467888 88876532
Q ss_pred -CCCCceeEEEeccccceeeecCCCCCC-CCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 63 -FSNDCFDVVIEKATMEVLFVNSGDPWN-PQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 63 -~~~~~~D~v~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
++.++||+|++...++... +|. +..........+++++.++|+|||++++..+....
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATG-----FRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCS-----CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred hcCCCCCcEEEeCCCCCCCC-----CcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 2346899999976554321 000 00000011258899999999999999988776543
No 235
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.35 E-value=1.8e-11 Score=94.24 Aligned_cols=133 Identities=17% Similarity=0.182 Sum_probs=95.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|-++..++ +...|+++|+++.+++.+++++...+ .+..+...|....+.+ ++||+|++.-++|++
T Consensus 106 p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~L 181 (253)
T 3frh_A 106 PRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAPPA-EAGDLALIFKLLPLL 181 (253)
T ss_dssp CSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSCCC-CBCSEEEEESCHHHH
T ss_pred CCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCCCC-CCcchHHHHHHHHHh
Confidence 4689999999999999887 33499999999999999999988776 4788999998876654 589999998888877
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe---cCCc------cccccccc-CCCCceEEEEEEeCCeeeE
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS---FGQP------HFRRPFFN-APQFTWSVEWITFGDGFHY 150 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~---~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 150 (201)
++ ......+ ++.+.|+++|.++-.. .+.+ .....+.. .....|......+++.+.|
T Consensus 182 ------------E~-q~~~~~~-~ll~aL~~~~vvVsfPtksl~Gr~~gm~~~Y~~~~e~~~~~~~~~~~~~~~~nEl~~ 247 (253)
T 3frh_A 182 ------------ER-EQAGSAM-ALLQSLNTPRMAVSFPTRSLGGRGKGMEANYAAWFEGGLPAEFEIEDKKTIGTELIY 247 (253)
T ss_dssp ------------HH-HSTTHHH-HHHHHCBCSEEEEEEECC-----------CHHHHHHHHSCTTEEEEEEEEETTEEEE
T ss_pred ------------hh-hchhhHH-HHHHHhcCCCEEEEcChHHhcCCCcchhhHHHHHHHHHhhccchhhhheecCceEEE
Confidence 22 2223444 8888999988766543 1111 11111111 2455677777778887666
Q ss_pred E
Q 028957 151 F 151 (201)
Q Consensus 151 ~ 151 (201)
.
T Consensus 248 ~ 248 (253)
T 3frh_A 248 L 248 (253)
T ss_dssp E
T ss_pred E
Confidence 4
No 236
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.35 E-value=7.7e-13 Score=111.41 Aligned_cols=122 Identities=15% Similarity=0.106 Sum_probs=86.6
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-CCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-FSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~D~v~~~~~l 77 (201)
|.+|||+|||+|..+..++.. +. ..|+++|+++.+++.+++++...++.++.++++|+..+. ...++||+|++....
T Consensus 106 g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPC 185 (456)
T 3m4x_A 106 GEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPC 185 (456)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCC
T ss_pred CCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCC
Confidence 578999999999999999876 22 389999999999999999999988888999999987653 234789999974321
Q ss_pred ---ceeeecCCCCCCCCCccH----HHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 78 ---EVLFVNSGDPWNPQPETV----TKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 78 ---~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
..+-.+.+..|...+... ....++++++.++|||||++++.+++.
T Consensus 186 Sg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 186 SGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp CCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 000000000000000011 123488999999999999999877653
No 237
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.32 E-value=3.8e-12 Score=98.92 Aligned_cols=135 Identities=17% Similarity=0.222 Sum_probs=96.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||||||+|-++..++...+. .|+++|+++.+++.+++++...+. +..+...|....+ +.++||++++.-++|+
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~-~~~~~v~D~~~~~-p~~~~DvaL~lkti~~ 210 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNV-PHRTNVADLLEDR-LDEPADVTLLLKTLPC 210 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTC-CEEEEECCTTTSC-CCSCCSEEEETTCHHH
T ss_pred CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEeeecccC-CCCCcchHHHHHHHHH
Confidence 468999999999999999887555 999999999999999999988886 4788888877644 4578999999988887
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec---CCc--c----ccccccc-CCCCceEEEEEEeCCeee
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF---GQP--H----FRRPFFN-APQFTWSVEWITFGDGFH 149 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~---~~~--~----~~~~~~~-~~~~~~~~~~~~~~~~~~ 149 (201)
+ ..+.....+ ++.+.|+++|.++-..- ..+ . ....+.. .....|......+++.+.
T Consensus 211 L-------------e~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~Grs~gm~~~Y~~~~e~~~~~~g~~~~~~~~~nEl~ 276 (281)
T 3lcv_B 211 L-------------ETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQRSKGMFQNYSQSFESQARERSCRIQRLEIGNELI 276 (281)
T ss_dssp H-------------HHHSTTHHH-HHHHHSSCSEEEEEEECC-------CHHHHHHHHHHHHHHHHTCCEEEEEETTEEE
T ss_pred h-------------hhhhhHHHH-HHHHHhCCCCEEEeccchhhcCCCcchhhHHHHHHHHHHHhcCCceeeeeecCeeE
Confidence 7 222233555 89999999998775432 111 1 1111111 122456667777777666
Q ss_pred EE
Q 028957 150 YF 151 (201)
Q Consensus 150 ~~ 151 (201)
|.
T Consensus 277 y~ 278 (281)
T 3lcv_B 277 YV 278 (281)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 238
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.32 E-value=9.9e-12 Score=99.54 Aligned_cols=75 Identities=28% Similarity=0.515 Sum_probs=60.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++...+.++++++++|+..+++ .+||+|+++..++
T Consensus 43 ~~~VLDiG~G~G~lt~~La~~~~-~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~--~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLPLAK-KVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVF--PKFDVCTANIPYK 117 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTTTSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCC--CCCSEEEEECCGG
T ss_pred cCEEEEEcCcCcHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCc--ccCCEEEEcCCcc
Confidence 46899999999999999998865 999999999999999999876666789999999988664 4799999875554
No 239
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.30 E-value=1.5e-12 Score=102.43 Aligned_cols=96 Identities=19% Similarity=0.218 Sum_probs=77.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc----CCCceEEEEcccCCCCCCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK----GYKEVKVLEADMLDLPFSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~----~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~ 76 (201)
+++|||+|||+|..+..+++.+ .+|+++|+++.+++.+++++... .-++++++.+|+.... ++||+|++..
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d~- 147 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCLQ- 147 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEESS-
T ss_pred CCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEECC-
Confidence 4689999999999999998885 79999999999999998876431 1357999999998753 7899999741
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.+| ..+++.+.+.|+|||.+++...
T Consensus 148 --------~dp-----------~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 148 --------EPD-----------IHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp --------CCC-----------HHHHHHHHTTEEEEEEEEEEEE
T ss_pred --------CCh-----------HHHHHHHHHhcCCCcEEEEEcC
Confidence 111 2389999999999999987643
No 240
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.30 E-value=6.3e-12 Score=102.48 Aligned_cols=117 Identities=19% Similarity=0.207 Sum_probs=84.1
Q ss_pred CcEEEecCCCChhhHHHHhcCC------CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecc
Q 028957 2 TSVLELGCGNSRLSEGLYNDGI------TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 75 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~------~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 75 (201)
.+|||+|||+|.++..+++... .+++|+|+++.+++.|+.++...+. ++.++++|.... ....+||+|+++.
T Consensus 132 ~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~-~~~i~~~D~l~~-~~~~~fD~Ii~NP 209 (344)
T 2f8l_A 132 VSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ-KMTLLHQDGLAN-LLVDPVDVVISDL 209 (344)
T ss_dssp EEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-CCEEEESCTTSC-CCCCCEEEEEEEC
T ss_pred CEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-CceEEECCCCCc-cccCCccEEEECC
Confidence 5899999999999999887632 3899999999999999999887765 689999998763 3357899999987
Q ss_pred ccceeeecC-CCCCCCC-CccHH-HHHHHHHHHhhcccCCcEEEEEec
Q 028957 76 TMEVLFVNS-GDPWNPQ-PETVT-KVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 76 ~l~~~~~~~-~~~~~~~-~~~~~-~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.++.+-.+. ..-|.+. +.... ....+++++.+.|+|||+++++..
T Consensus 210 Pfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 210 PVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp CCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 765430000 0000000 00011 123689999999999999888764
No 241
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.28 E-value=3e-11 Score=101.44 Aligned_cols=73 Identities=23% Similarity=0.371 Sum_probs=63.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC----CCCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL----PFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~~~~~~D~v~~~ 74 (201)
+.+|||+|||+|.++..++..+. +|+++|+++.+++.|+++...++.+++.++++|+.+. ++..++||+|+++
T Consensus 287 ~~~VLDlgcG~G~~~~~la~~~~-~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~d 363 (433)
T 1uwv_A 287 EDRVLDLFCGMGNFTLPLATQAA-SVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLD 363 (433)
T ss_dssp TCEEEEESCTTTTTHHHHHTTSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEEC
T ss_pred CCEEEECCCCCCHHHHHHHhhCC-EEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEEC
Confidence 36899999999999999998854 9999999999999999999888877999999999872 2345689999973
No 242
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.28 E-value=8.7e-11 Score=94.40 Aligned_cols=121 Identities=13% Similarity=0.054 Sum_probs=82.7
Q ss_pred CCcEEEecCCCChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCC---CceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN---DCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~~D~v~~~~ 75 (201)
|.+|||+|||+|..+..++.. +. .+|+++|+++.+++.+++++...++.++.++.+|+..+.... .+||.|++..
T Consensus 103 g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~ 182 (309)
T 2b9e_A 103 GSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDP 182 (309)
T ss_dssp TCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECC
T ss_pred CCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcC
Confidence 578999999999999999885 22 399999999999999999999888888999999998764322 4799999632
Q ss_pred c---cceeeecCCCCCCC--CCccHH----HHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 76 T---MEVLFVNSGDPWNP--QPETVT----KVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 76 ~---l~~~~~~~~~~~~~--~~~~~~----~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
. ...+-.+.+.+|.. .++... ...++++.+.++++ ||++++.+++.
T Consensus 183 PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 183 SCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp CCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred CcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 1 11111112233321 111222 23467888888886 89988877653
No 243
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.28 E-value=4.8e-11 Score=98.63 Aligned_cols=110 Identities=15% Similarity=0.172 Sum_probs=86.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCC---------------------------------------CeEEEEECCHHHHHHHHH
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI---------------------------------------TAITCIDLSAVAVEKMQE 41 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~---------------------------------------~~v~~vD~~~~~~~~~~~ 41 (201)
+..|||.+||+|+++++++..+. .+++|+|+++.+++.+++
T Consensus 195 ~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~ 274 (384)
T 3ldg_A 195 DKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIARK 274 (384)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHHH
Confidence 35799999999999999886532 159999999999999999
Q ss_pred HHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccC--CcEEEEE
Q 028957 42 RLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP--DGLFISV 118 (201)
Q Consensus 42 ~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~--gG~l~~~ 118 (201)
|+...++. .+.+.++|+.+++.+ .+||+|+++ +||........+...+.+.+.+.|++ ||.++++
T Consensus 275 Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~N-----------PPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 342 (384)
T 3ldg_A 275 NAREVGLEDVVKLKQMRLQDFKTN-KINGVLISN-----------PPYGERLLDDKAVDILYNEMGETFAPLKTWSQFIL 342 (384)
T ss_dssp HHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEEC-----------CCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHcCCCCceEEEECChHHCCcc-CCcCEEEEC-----------CchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEE
Confidence 99988864 599999999987654 489999985 34433333445677787777777766 9998888
Q ss_pred ecCC
Q 028957 119 SFGQ 122 (201)
Q Consensus 119 ~~~~ 122 (201)
+...
T Consensus 343 t~~~ 346 (384)
T 3ldg_A 343 TNDT 346 (384)
T ss_dssp ESCT
T ss_pred ECCH
Confidence 7643
No 244
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.28 E-value=2.2e-12 Score=99.73 Aligned_cols=96 Identities=9% Similarity=0.108 Sum_probs=63.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC---CCceEEEEcccCCCCCCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG---YKEVKVLEADMLDLPFSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~---~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l 77 (201)
+++|||+|||+|.++..+++.+..+|+|+|+++.|++.++++..... ..++.+... .+ ++...+|.+.+..++
T Consensus 38 g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~d~~~~D~v~ 113 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVL--AD--FEQGRPSFTSIDVSF 113 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCG--GG--CCSCCCSEEEECCSS
T ss_pred CCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCH--hH--cCcCCCCEEEEEEEh
Confidence 46899999999999999999976699999999999998776432110 011212211 11 111123444432222
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
.. ...+++++.++|||||.+++.
T Consensus 114 ~~------------------l~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 114 IS------------------LDLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp SC------------------GGGTHHHHHHHSCTTCEEEEE
T ss_pred hh------------------HHHHHHHHHHhccCCCEEEEE
Confidence 11 156999999999999999886
No 245
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.28 E-value=1.1e-12 Score=104.00 Aligned_cols=105 Identities=15% Similarity=0.169 Sum_probs=72.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHh-hcCC-CceEEE--EcccCCCCCCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLL-LKGY-KEVKVL--EADMLDLPFSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~-~~~~-~~i~~~--~~d~~~~~~~~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|.++..+++. .+|+++|+++ ++..++++.. .... .++.++ ++|+..++ +++||+|+|...
T Consensus 83 g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 83 KGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG 157 (276)
T ss_dssp CEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC
T ss_pred CCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC
Confidence 468999999999999999988 4899999998 5322221100 0000 168888 89998765 678999999765
Q ss_pred cceeeecCCCCCCCCCccHHHH--HHHHHHHhhcccCCc--EEEEEecC
Q 028957 77 MEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDG--LFISVSFG 121 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~L~~gG--~l~~~~~~ 121 (201)
+.. +.| ..+.. .++++.+.++|+||| .+++..+.
T Consensus 158 -~~~----~~~------~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 158 -ESN----PTA------AVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp -CCC----SCH------HHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred -cCC----Cch------hhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 321 111 01111 247899999999999 98887776
No 246
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.28 E-value=3.1e-11 Score=99.85 Aligned_cols=110 Identities=13% Similarity=0.177 Sum_probs=85.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCC---------------------------------------CeEEEEECCHHHHHHHHH
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI---------------------------------------TAITCIDLSAVAVEKMQE 41 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~---------------------------------------~~v~~vD~~~~~~~~~~~ 41 (201)
+.+|||++||+|.++++++..+. .+|+|+|+++.+++.|++
T Consensus 196 ~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~ 275 (385)
T 3ldu_A 196 GRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIARE 275 (385)
T ss_dssp TSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHH
Confidence 36899999999999999876532 269999999999999999
Q ss_pred HHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccC--CcEEEEE
Q 028957 42 RLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP--DGLFISV 118 (201)
Q Consensus 42 ~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~--gG~l~~~ 118 (201)
++...++. ++++.++|+.+++.+ .+||+|+++-. |.......++..++.+.+.+.|++ |+.++++
T Consensus 276 Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPP-----------yg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 343 (385)
T 3ldu_A 276 NAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPP-----------YGERLEDKDSVKQLYKELGYAFRKLKNWSYYLI 343 (385)
T ss_dssp HHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCC-----------CCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEE
T ss_pred HHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCC-----------CcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEE
Confidence 99888764 699999999987654 58999998643 332222335567777777777776 8888887
Q ss_pred ecCC
Q 028957 119 SFGQ 122 (201)
Q Consensus 119 ~~~~ 122 (201)
+...
T Consensus 344 t~~~ 347 (385)
T 3ldu_A 344 TSYE 347 (385)
T ss_dssp ESCT
T ss_pred ECCH
Confidence 7643
No 247
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.28 E-value=3.2e-11 Score=100.03 Aligned_cols=110 Identities=15% Similarity=0.140 Sum_probs=83.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCC---------------------------------------CeEEEEECCHHHHHHHHH
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI---------------------------------------TAITCIDLSAVAVEKMQE 41 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~---------------------------------------~~v~~vD~~~~~~~~~~~ 41 (201)
+..|||.+||+|+++++++..+. .+|+|+|+++.+++.|++
T Consensus 202 ~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHHH
Confidence 35799999999999999886532 159999999999999999
Q ss_pred HHhhcCCC-ceEEEEcccCCCCCCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccC--CcEEEEE
Q 028957 42 RLLLKGYK-EVKVLEADMLDLPFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKP--DGLFISV 118 (201)
Q Consensus 42 ~~~~~~~~-~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~--gG~l~~~ 118 (201)
++...++. ++.+.++|+.+++.+ .+||+|+++-. |............+.+.+.+.|++ ||.++++
T Consensus 282 Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPP-----------Yg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ii 349 (393)
T 3k0b_A 282 NAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPP-----------YGERLEDEEAVRQLYREMGIVYKRMPTWSVYVL 349 (393)
T ss_dssp HHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCC-----------CCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEE
T ss_pred HHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCC-----------CccccCCchhHHHHHHHHHHHHhcCCCCEEEEE
Confidence 99988864 599999999987654 58999998633 322212234566677777666665 8998888
Q ss_pred ecCC
Q 028957 119 SFGQ 122 (201)
Q Consensus 119 ~~~~ 122 (201)
+...
T Consensus 350 t~~~ 353 (393)
T 3k0b_A 350 TSYE 353 (393)
T ss_dssp ECCT
T ss_pred ECCH
Confidence 7643
No 248
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.27 E-value=2.7e-12 Score=103.05 Aligned_cols=107 Identities=15% Similarity=0.163 Sum_probs=72.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEEC----CHHHHHHHHHHHhhcCCCceEEEEc-ccCCCCCCCCceeEEEecc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDL----SAVAVEKMQERLLLKGYKEVKVLEA-DMLDLPFSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~----~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~D~v~~~~ 75 (201)
|.+|||+|||+|.++..+++. . +|+++|+ ++.++..+. ....+.+++.++++ |+..++ ..+||+|+|..
T Consensus 83 g~~VLDlGcG~G~~s~~la~~-~-~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~l~--~~~fD~V~sd~ 156 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL-K-NVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFFIP--PERCDTLLCDI 156 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS-T-TEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTTSC--CCCCSEEEECC
T ss_pred CCEEEEEcCCCCHHHHHHHhc-C-CEEEEeccccCchhHHHHHH--hhhcCCCCeEEEeccccccCC--cCCCCEEEECC
Confidence 468999999999999999988 3 7999998 454331110 11111257899998 887654 56899999976
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.++.. . |. ........+++.+.++|+|||.+++..+..
T Consensus 157 ~~~~g-----~-~~---~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 157 GESSP-----N-PT---VEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CCCCS-----S-HH---HHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred ccccC-----c-ch---hhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 65311 0 00 001111257889999999999998876654
No 249
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.27 E-value=2.6e-12 Score=101.22 Aligned_cols=105 Identities=17% Similarity=0.172 Sum_probs=72.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhh-cCC-CceEEE--EcccCCCCCCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLL-KGY-KEVKVL--EADMLDLPFSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~-~~~-~~i~~~--~~d~~~~~~~~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|.++..+++. .+|+++|+++ ++..+++.... ... .++.++ ++|+..++ +++||+|+|...
T Consensus 75 g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~ 149 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG 149 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC
T ss_pred CCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc
Confidence 468999999999999999988 4899999988 43222111000 000 167888 88998765 678999999765
Q ss_pred cceeeecCCCCCCCCCccHHHH--HHHHHHHhhcccCCc--EEEEEecC
Q 028957 77 MEVLFVNSGDPWNPQPETVTKV--MAMLEGVHRVLKPDG--LFISVSFG 121 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~L~~gG--~l~~~~~~ 121 (201)
+.. ++| ..+.. .++++.+.++|+||| .+++..+.
T Consensus 150 -~~~----~~~------~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 150 -ESS----PKW------SVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp -CCC----SCH------HHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred -ccC----Ccc------chhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 322 110 11111 248899999999999 98887776
No 250
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.27 E-value=3.4e-11 Score=100.83 Aligned_cols=97 Identities=14% Similarity=0.172 Sum_probs=75.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++..++.+ +.++++|+.+... .+||+|+++....
T Consensus 291 ~~~VLDlgcG~G~~sl~la~~~~-~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~--~~fD~Vv~dPPr~-- 364 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAKRGF-NVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSV--KGFDTVIVDPPRA-- 364 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCC--TTCSEEEECCCTT--
T ss_pred CCEEEEeeccchHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCc--cCCCEEEEcCCcc--
Confidence 46899999999999999998865 9999999999999999999888776 9999999987642 2899999732211
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
. ....+++.+. .|+|+|.+++..
T Consensus 365 -------------g--~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 365 -------------G--LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp -------------C--SCHHHHHHHH-HHCCSEEEEEES
T ss_pred -------------c--hHHHHHHHHH-hcCCCcEEEEEC
Confidence 0 0123455444 489999888654
No 251
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.25 E-value=1.6e-11 Score=100.02 Aligned_cols=112 Identities=21% Similarity=0.265 Sum_probs=80.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC---C-----CceEEEEcccCCCCC----CCCce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG---Y-----KEVKVLEADMLDLPF----SNDCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~---~-----~~i~~~~~d~~~~~~----~~~~~ 68 (201)
+++||++|||+|..+.++++.+..+|+++|+++.+++.+++++.... . ++++++.+|+...-. ..++|
T Consensus 189 pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~f 268 (364)
T 2qfm_A 189 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREF 268 (364)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCE
T ss_pred CCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCc
Confidence 47999999999999999998876799999999999999999875321 1 269999999986321 35789
Q ss_pred eEEEeccccceeeecCCC-CCCCCCc---cHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 69 DVVIEKATMEVLFVNSGD-PWNPQPE---TVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~-~~~~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
|+|++... + |....|. ..+-...+++.+.++|+|||.+++...+
T Consensus 269 DvII~D~~---------d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 269 DYVINDLT---------AVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp EEEEEECC---------SSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred eEEEECCC---------CcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 99996321 1 2221121 1223344444449999999999876544
No 252
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.25 E-value=1.8e-12 Score=95.56 Aligned_cols=86 Identities=16% Similarity=0.137 Sum_probs=69.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC---CCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF---SNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~v~~~~~l 77 (201)
|.+|||+|||. + ++|+++.|++.++++... ++++.++|+.++++ ++++||+|++..++
T Consensus 13 g~~vL~~~~g~--------------v-~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l 73 (176)
T 2ld4_A 13 GQFVAVVWDKS--------------S-PVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDIILSGLVP 73 (176)
T ss_dssp TSEEEEEECTT--------------S-CHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEEEEECCST
T ss_pred CCEEEEecCCc--------------e-eeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeEEEECChh
Confidence 46777887774 2 399999999999988643 48999999998776 78899999999888
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
|++. .+..+++++++++|||||++++..
T Consensus 74 ~~~~--------------~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 74 GSTT--------------LHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp TCCC--------------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhcc--------------cCHHHHHHHHHHHCCCCEEEEEEc
Confidence 7651 234789999999999999999854
No 253
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.21 E-value=5.4e-11 Score=94.93 Aligned_cols=75 Identities=20% Similarity=0.316 Sum_probs=65.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+++|||+|||+|.++..+++.+. +|+++|+++.+++.+++++.. .++++++++|+.+++++..+||+|+++..++
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~~~-~V~aVEid~~li~~a~~~~~~--~~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKNAK-KVYVIEIDKSLEPYANKLKEL--YNNIEIIWGDALKVDLNKLDFNKVVANLPYQ 125 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS-EEEEEESCGGGHHHHHHHHHH--CSSEEEEESCTTTSCGGGSCCSEEEEECCGG
T ss_pred cCEEEEECCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhcc--CCCeEEEECchhhCCcccCCccEEEEeCccc
Confidence 46899999999999999999865 999999999999999998873 3589999999998877767899999876553
No 254
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.20 E-value=2.5e-11 Score=99.92 Aligned_cols=102 Identities=13% Similarity=0.210 Sum_probs=77.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--CCC-------------
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--FSN------------- 65 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~------------- 65 (201)
+.+|||+|||+|.++..++.... +|+++|+++.+++.+++++..+++++++++++|+.+.. ...
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~~-~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~ 292 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNFD-RVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLK 292 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGSS-EEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGG
T ss_pred CCEEEEccCCCCHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccc
Confidence 36899999999999999887544 99999999999999999999888888999999987531 111
Q ss_pred -CceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 66 -DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 66 -~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
.+||+|++. +|. . .+..++.+.|+++|.+++++++...
T Consensus 293 ~~~fD~Vv~d-----------PPr-----~-----g~~~~~~~~l~~~g~ivyvsc~p~t 331 (369)
T 3bt7_A 293 SYQCETIFVD-----------PPR-----S-----GLDSETEKMVQAYPRILYISCNPET 331 (369)
T ss_dssp GCCEEEEEEC-----------CCT-----T-----CCCHHHHHHHTTSSEEEEEESCHHH
T ss_pred cCCCCEEEEC-----------cCc-----c-----ccHHHHHHHHhCCCEEEEEECCHHH
Confidence 379999862 221 0 1234455666789998888876543
No 255
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.16 E-value=3.3e-11 Score=99.45 Aligned_cols=100 Identities=19% Similarity=0.179 Sum_probs=79.3
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhc---------------CCCceEEEEcccCCCC-C
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLK---------------GYKEVKVLEADMLDLP-F 63 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~---------------~~~~i~~~~~d~~~~~-~ 63 (201)
+.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++|+..+ +..++.++++|+..+. .
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~ 127 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE 127 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHh
Confidence 468999999999999999987 4348999999999999999999887 7656999999987642 1
Q ss_pred CCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 64 SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 64 ~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
..++||+|+.. |. -....+++.+.+.|++||.+++..
T Consensus 128 ~~~~fD~I~lD------------P~-------~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 128 RHRYFHFIDLD------------PF-------GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp STTCEEEEEEC------------CS-------SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccCCCCEEEeC------------CC-------CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 13579999952 11 012578888899999999877653
No 256
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.15 E-value=7.8e-11 Score=97.43 Aligned_cols=100 Identities=17% Similarity=0.141 Sum_probs=79.6
Q ss_pred CCcEEEecCCCChhhHHHHhc--CCCeEEEEECCHHHHHHHHHHHhhcCCCc--eEEEEcccCCCC--CCCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYND--GITAITCIDLSAVAVEKMQERLLLKGYKE--VKVLEADMLDLP--FSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~~~~~~~~~~~~~--i~~~~~d~~~~~--~~~~~~D~v~~~ 74 (201)
|.+|||++||+|.++..++.. +..+|+++|+++.+++.+++|++.+++.+ +.++++|+.... ...++||+|++.
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lD 132 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLD 132 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEEC
T ss_pred CCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEEC
Confidence 468999999999999999985 43599999999999999999999988755 999999987631 124579999963
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
|+ .....+++.+.+.|++||.+++..
T Consensus 133 ------------P~-------g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 133 ------------PF-------GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ------------CS-------SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ------------CC-------cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 21 112458888899999999877654
No 257
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.13 E-value=9.3e-11 Score=98.76 Aligned_cols=118 Identities=19% Similarity=0.189 Sum_probs=84.4
Q ss_pred CCcEEEecCCCChhhHHHHhcC--------------CCeEEEEECCHHHHHHHHHHHhhcCCC--ceEEEEcccCCCCCC
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG--------------ITAITCIDLSAVAVEKMQERLLLKGYK--EVKVLEADMLDLPFS 64 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~--------------~~~v~~vD~~~~~~~~~~~~~~~~~~~--~i~~~~~d~~~~~~~ 64 (201)
+.+|||.|||+|.++..+++.. ...++|+|+++.+++.|+.++...+.. ++.+.++|....+..
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~ 251 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS 251 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc
Confidence 3689999999999999887641 127999999999999999998877754 678899998775543
Q ss_pred CCceeEEEeccccceeeecCCCCCCCC---CccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 65 NDCFDVVIEKATMEVLFVNSGDPWNPQ---PETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 65 ~~~~D~v~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.+||+|+++..+...... ..++... .........+++++.+.|+|||++.++.+
T Consensus 252 -~~fD~Iv~NPPf~~~~~~-~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 252 -TLVDVILANPPFGTRPAG-SVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp -SCEEEEEECCCSSCCCTT-CCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred -CCcCEEEECCCCCCcccc-cchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 489999998766543100 0000000 00011235789999999999999887764
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.10 E-value=7.1e-10 Score=86.73 Aligned_cols=72 Identities=18% Similarity=0.343 Sum_probs=60.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCC----CCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFS----NDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~D~v~~~~~ 76 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++.. .++++++++|+.+++++ .++|| |+++..
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~~~-~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTECD-NLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTTSS-EEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGGSCCSSCEE-EEEECC
T ss_pred cCEEEEEcccccHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHHhccCCCeE-EEecCC
Confidence 46899999999999999999875 999999999999999998865 35899999999987643 34688 665543
No 259
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.10 E-value=1.6e-10 Score=95.90 Aligned_cols=73 Identities=18% Similarity=0.135 Sum_probs=62.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc--CCCceEEEEcccCCC-CC-CCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK--GYKEVKVLEADMLDL-PF-SNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~--~~~~i~~~~~d~~~~-~~-~~~~~D~v~~~ 74 (201)
|.+|||+|||+|..+..++..+. +|+++|+++.+++.+++++... +..+++++++|+.+. +. +.++||+|++.
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g~-~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKAS-QGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTCS-EEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred CCEEEEeCCCchHHHHHHHhcCC-EEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 57899999999999999988876 9999999999999999999877 667899999999874 21 23579999974
No 260
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.10 E-value=1.2e-10 Score=96.96 Aligned_cols=109 Identities=18% Similarity=0.235 Sum_probs=75.3
Q ss_pred CCcEEEecCCCChhhHHHHhc--CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND--GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|||+|||+|.++..+++. ...+++|+|+++.+++.+ .++.++++|+..... .++||+|+++-.+.
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~~D~~~~~~-~~~fD~Ii~NPPy~ 109 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGILADFLLWEP-GEAFDLILGNPPYG 109 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEESCGGGCCC-SSCEEEEEECCCCC
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEeCChhhcCc-cCCCCEEEECcCcc
Confidence 358999999999999999875 223999999999988766 378999999987543 46899999864332
Q ss_pred eeeecCCCCCC-CCCccH---------------HHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWN-PQPETV---------------TKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~-~~~~~~---------------~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
..-. ..++. ..+... .....+++.+.++|+|||+++++...
T Consensus 110 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 110 IVGE--ASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CBSC--TTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred Cccc--ccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 1100 00000 000000 01236799999999999999887654
No 261
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.10 E-value=2e-10 Score=91.43 Aligned_cols=103 Identities=13% Similarity=0.065 Sum_probs=70.0
Q ss_pred CCcEEEecCCC------ChhhHHHHhc-CC-CeEEEEECCHHHHHHHHHHHhhcCCCceEE-EEcccCCCCCCCCceeEE
Q 028957 1 MTSVLELGCGN------SRLSEGLYND-GI-TAITCIDLSAVAVEKMQERLLLKGYKEVKV-LEADMLDLPFSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~------G~~~~~l~~~-~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~-~~~d~~~~~~~~~~~D~v 71 (201)
|.+|||+|||+ |. ..+++. +. .+|+++|+++. ++++.+ +++|+.+++++ ++||+|
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~-~~fD~V 127 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTA-NKWDLI 127 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCS-SCEEEE
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCcc-CcccEE
Confidence 46899999955 55 334443 32 39999999987 136788 99999887654 689999
Q ss_pred EeccccceeeecCCCCC-CCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 72 IEKATMEVLFVNSGDPW-NPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
+++...+.. + .| .+..........+++++.++|||||.+++..+....
T Consensus 128 vsn~~~~~~----g-~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~ 176 (290)
T 2xyq_A 128 ISDMYDPRT----K-HVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 176 (290)
T ss_dssp EECCCCCC--------CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred EEcCCcccc----c-cccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 986432211 0 01 011122345678999999999999999987665443
No 262
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.10 E-value=8.7e-10 Score=85.67 Aligned_cols=72 Identities=17% Similarity=0.388 Sum_probs=59.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCC-CceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-DCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~D~v~~~~~ 76 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.+++++... ++++++++|+.+++++. ..| .|+++..
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~--~~v~~~~~D~~~~~~~~~~~~-~vv~nlP 103 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQRCN-FVTAIEIDHKLCKTTENKLVDH--DNFQVLNKDILQFKFPKNQSY-KIFGNIP 103 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHHSS-EEEEECSCHHHHHHHHHHTTTC--CSEEEECCCGGGCCCCSSCCC-EEEEECC
T ss_pred CCEEEEEeCCchHHHHHHHHcCC-eEEEEECCHHHHHHHHHhhccC--CCeEEEEChHHhCCcccCCCe-EEEEeCC
Confidence 46899999999999999999875 9999999999999999987643 58999999999887653 345 4555433
No 263
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.06 E-value=9.3e-12 Score=96.81 Aligned_cols=101 Identities=20% Similarity=0.308 Sum_probs=74.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCC-CceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-DCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~D~v~~~~~l~~ 79 (201)
+.+|||+|||+|.++..+++.+. +|+++|+++.+++.++++... .++++++++|+.+++++. ++| .|+++..++.
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~~~-~v~~id~~~~~~~~a~~~~~~--~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~ 105 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKISK-QVTSIELDSHLFNLSSEKLKL--NTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHL 105 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHHSS-EEEESSSSCSSSSSSSCTTTT--CSEEEECCSCCTTTTCCCSSEE-EEEEECCSSS
T ss_pred CCEEEEEeCCCCHHHHHHHHhCC-eEEEEECCHHHHHHHHHHhcc--CCceEEEECChhhcCcccCCCc-EEEEeCCccc
Confidence 35899999999999999999874 999999999999988877652 357999999999887653 678 6666533221
Q ss_pred eeecCCCCCCCCCccHHHHHHH----------H----HHHhhcccCCcEEEEEe
Q 028957 80 LFVNSGDPWNPQPETVTKVMAM----------L----EGVHRVLKPDGLFISVS 119 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~----------l----~~~~~~L~~gG~l~~~~ 119 (201)
.......+ + +.+.++|+|||.+.+..
T Consensus 106 --------------~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 106 --------------STQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp --------------CHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred --------------cHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 01122222 2 56889999999977644
No 264
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.04 E-value=1.7e-09 Score=95.84 Aligned_cols=110 Identities=14% Similarity=0.120 Sum_probs=79.8
Q ss_pred CCcEEEecCCCChhhHHHHhcC------------------------------------------C-CeEEEEECCHHHHH
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG------------------------------------------I-TAITCIDLSAVAVE 37 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~------------------------------------------~-~~v~~vD~~~~~~~ 37 (201)
+.+|||.+||+|.++++++..+ . ..++|+|+++.+++
T Consensus 191 ~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~ 270 (703)
T 3v97_A 191 GTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQ 270 (703)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHH
T ss_pred CCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHHH
Confidence 3579999999999999887642 1 27999999999999
Q ss_pred HHHHHHhhcCCCc-eEEEEcccCCCCCC--CCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHH---HhhcccC
Q 028957 38 KMQERLLLKGYKE-VKVLEADMLDLPFS--NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEG---VHRVLKP 111 (201)
Q Consensus 38 ~~~~~~~~~~~~~-i~~~~~d~~~~~~~--~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~L~~ 111 (201)
.|++|+...++.+ +.+.++|+.++..+ .++||+|+++-. |............+.+. +.+.+.|
T Consensus 271 ~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPP-----------YG~Rlg~~~~l~~ly~~l~~~lk~~~~ 339 (703)
T 3v97_A 271 RARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPP-----------YGERLDSEPALIALHSLLGRIMKNQFG 339 (703)
T ss_dssp HHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCC-----------CCC---CCHHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCC-----------ccccccchhHHHHHHHHHHHHHHhhCC
Confidence 9999999888654 89999999886432 338999998643 32211122344444444 4445568
Q ss_pred CcEEEEEecC
Q 028957 112 DGLFISVSFG 121 (201)
Q Consensus 112 gG~l~~~~~~ 121 (201)
||.+++++..
T Consensus 340 g~~~~ilt~~ 349 (703)
T 3v97_A 340 GWNLSLFSAS 349 (703)
T ss_dssp TCEEEEEESC
T ss_pred CCeEEEEeCC
Confidence 9999988754
No 265
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.01 E-value=5.7e-10 Score=87.98 Aligned_cols=72 Identities=21% Similarity=0.284 Sum_probs=61.5
Q ss_pred cEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCC-CceeEEEeccccc
Q 028957 3 SVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-DCFDVVIEKATME 78 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~D~v~~~~~l~ 78 (201)
+|||+|||+|.++..+++.+. +|+++|+++++++.+++++.. .+++++++|+.+++++. ..+|.|+++..++
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~-~V~avEid~~~~~~l~~~~~~---~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGA-EVTAIEKDLRLRPVLEETLSG---LPVRLVFQDALLYPWEEVPQGSLLVANLPYH 121 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTTT---SSEEEEESCGGGSCGGGSCTTEEEEEEECSS
T ss_pred eEEEEeCchHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCC---CCEEEEECChhhCChhhccCccEEEecCccc
Confidence 799999999999999999975 899999999999999998763 48999999998876543 2689998875543
No 266
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.97 E-value=1.8e-10 Score=90.35 Aligned_cols=76 Identities=13% Similarity=0.113 Sum_probs=61.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCH-------HHHHHHHHHHhhcCCC-ceEEEEcccCCC-C-CCC--Cce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSA-------VAVEKMQERLLLKGYK-EVKVLEADMLDL-P-FSN--DCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~-------~~~~~~~~~~~~~~~~-~i~~~~~d~~~~-~-~~~--~~~ 68 (201)
+.+|||+|||+|.++..++..+. +|+++|+++ .+++.++++...+++. +++++++|+... + +++ ++|
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~f 162 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKP 162 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCC
T ss_pred cCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCc
Confidence 46899999999999999999876 899999999 9999998877665543 499999998763 2 333 689
Q ss_pred eEEEecccc
Q 028957 69 DVVIEKATM 77 (201)
Q Consensus 69 D~v~~~~~l 77 (201)
|+|+++..+
T Consensus 163 D~V~~dP~~ 171 (258)
T 2r6z_A 163 DIVYLDPMY 171 (258)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCC
Confidence 999975443
No 267
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.96 E-value=7.6e-09 Score=82.12 Aligned_cols=108 Identities=24% Similarity=0.382 Sum_probs=82.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhc-----CCCceEEEEcccCCC-CCCCCceeEEEe
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLK-----GYKEVKVLEADMLDL-PFSNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~-~~~~~~~D~v~~ 73 (201)
+++||-+|.|.|..+.++++... .+|+.+|+++.+++.+++.+... .-++++++.+|+... ....++||+|+.
T Consensus 84 pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~ 163 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIIS 163 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEE
T ss_pred CCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEE
Confidence 47899999999999999998743 49999999999999999887432 136899999999874 344678999995
Q ss_pred ccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
. ..+|+.+.. .--...+++.+++.|+|||.++...
T Consensus 164 D---------~~dp~~~~~--~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 164 D---------CTDPIGPGE--SLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp S---------CCCCCCTTC--CSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred e---------CCCcCCCch--hhcCHHHHHHHHHHhCCCCEEEEec
Confidence 3 223432211 1123579999999999999988754
No 268
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.93 E-value=2e-09 Score=92.69 Aligned_cols=119 Identities=12% Similarity=0.003 Sum_probs=82.7
Q ss_pred CCcEEEecCCCChhhHHHHhc----C---------------CCeEEEEECCHHHHHHHHHHHhhcCCCc-----eEEEEc
Q 028957 1 MTSVLELGCGNSRLSEGLYND----G---------------ITAITCIDLSAVAVEKMQERLLLKGYKE-----VKVLEA 56 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~----~---------------~~~v~~vD~~~~~~~~~~~~~~~~~~~~-----i~~~~~ 56 (201)
+.+|||.|||+|.++..+++. . ...++|+|+++.+++.|+.++...+... ..+.++
T Consensus 170 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~g 249 (541)
T 2ar0_A 170 REVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRLG 249 (541)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEES
T ss_pred CCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEeC
Confidence 468999999999999888754 1 1279999999999999999987777654 788999
Q ss_pred ccCCCC-CCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 57 DMLDLP-FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 57 d~~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
|....+ ....+||+|+++-.+....... ..+............+++.+.+.|+|||++.++.+
T Consensus 250 DtL~~~~~~~~~fD~Vv~NPPf~~~~~~~-~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 250 NTLGSDGENLPKAHIVATNPPFGSAAGTN-ITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CTTSHHHHTSCCEEEEEECCCCTTCSSCC-CCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcccccccccCCeEEEECCCcccccchh-hHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 976532 3346899999976554321000 00000000012234789999999999999887764
No 269
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.90 E-value=1.4e-08 Score=87.33 Aligned_cols=121 Identities=19% Similarity=0.201 Sum_probs=85.7
Q ss_pred CCcEEEecCCCChhhHHHHhcC----CCeEEEEECCHHHHHHHHHHHhhcCC--CceEEEEcccCCC--C-CCCCceeEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDG----ITAITCIDLSAVAVEKMQERLLLKGY--KEVKVLEADMLDL--P-FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~----~~~v~~vD~~~~~~~~~~~~~~~~~~--~~i~~~~~d~~~~--~-~~~~~~D~v 71 (201)
+.+|+|.+||+|.+...+++.. ...++|+|+++.+...|+.++...+. +++.+.++|.... + ....+||+|
T Consensus 222 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~I 301 (542)
T 3lkd_A 222 GFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGV 301 (542)
T ss_dssp TCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEE
T ss_pred CCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEE
Confidence 3589999999999998887762 23899999999999999999887776 5688999998765 3 345789999
Q ss_pred EeccccceeeecC----CCC-C---C-CCCccHHHHHHHHHHHhhccc-CCcEEEEEecCC
Q 028957 72 IEKATMEVLFVNS----GDP-W---N-PQPETVTKVMAMLEGVHRVLK-PDGLFISVSFGQ 122 (201)
Q Consensus 72 ~~~~~l~~~~~~~----~~~-~---~-~~~~~~~~~~~~l~~~~~~L~-~gG~l~~~~~~~ 122 (201)
+++-.+..-.... .++ | . ..+....+ -.+++.+.+.|+ +||++.++.+..
T Consensus 302 vaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~-~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 302 LMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKAD-FAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp EECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCH-HHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred EecCCcCCccccchhhhhhhhhhhhhhcCCCchhh-HHHHHHHHHHhCCCceeEEEEecch
Confidence 9986654211000 000 0 0 00111111 258999999999 999988876543
No 270
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.89 E-value=7.5e-09 Score=84.60 Aligned_cols=120 Identities=18% Similarity=0.143 Sum_probs=85.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCC------CceEEEEcccCCCC-CCCCceeEEE
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGY------KEVKVLEADMLDLP-FSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~------~~i~~~~~d~~~~~-~~~~~~D~v~ 72 (201)
|.+|||++||+|+-+..++..+.. .+++.|+++..++.+++++...+. .++.+...|+..++ ...+.||.|+
T Consensus 149 g~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VL 228 (359)
T 4fzv_A 149 GDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVL 228 (359)
T ss_dssp TEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEE
T ss_pred CCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEE
Confidence 568999999999999999988665 899999999999999999876543 46788888887653 3457899999
Q ss_pred eccccc----eeeecCCCCCCCCCccHH-------HHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 73 EKATME----VLFVNSGDPWNPQPETVT-------KVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 73 ~~~~l~----~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+...-. .+.- .+|......... ...++|.+..+.|||||+|+..+++-
T Consensus 229 lDaPCSg~g~g~~r--~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 229 VDVPCTTDRHSLHE--EENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp EECCCCCHHHHTTC--CTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred ECCccCCCCCcccc--cChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 532110 0100 111111111111 13578899999999999999888764
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.88 E-value=2.1e-09 Score=85.95 Aligned_cols=73 Identities=14% Similarity=0.181 Sum_probs=61.3
Q ss_pred CCcEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--C---CCCceeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--F---SNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~---~~~~~D~v~~~ 74 (201)
+.+|||+|||+|..+..+++..+ .+|+++|.++.+++.+++++...+ .++.++++|+..++ + ...+||.|++.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D 105 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTLGIEKVDGILMD 105 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHTTCSCEEEEEEE
T ss_pred CCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhcCCCCCCEEEEc
Confidence 46899999999999999998753 399999999999999999988776 68999999987753 1 12579999864
No 272
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.88 E-value=3.4e-08 Score=74.33 Aligned_cols=96 Identities=14% Similarity=0.021 Sum_probs=71.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC---CCceEEEEcccCCC---------------C
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG---YKEVKVLEADMLDL---------------P 62 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~---~~~i~~~~~d~~~~---------------~ 62 (201)
+++|||+|| |+-+..+++....+|+.+|.+++..+.++++++..+ ..++.++.+|+... +
T Consensus 31 a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~ 108 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYP 108 (202)
T ss_dssp CSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTT
T ss_pred CCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHH
Confidence 368999998 566777776522399999999999999999999877 35799999996532 1
Q ss_pred --------C-CCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 63 --------F-SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 63 --------~-~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
. ..++||+|+..+- .....+..+.+.|+|||.+++-
T Consensus 109 ~~~~~i~~~~~~~~fDlIfIDg~--------------------k~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 109 DYPLAVWRTEGFRHPDVVLVDGR--------------------FRVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp HHHHGGGGCTTCCCCSEEEECSS--------------------SHHHHHHHHHHHCSSCEEEEET
T ss_pred HHhhhhhccccCCCCCEEEEeCC--------------------CchhHHHHHHHhcCCCeEEEEe
Confidence 1 1367999996331 1135566677999999998653
No 273
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.86 E-value=1.2e-08 Score=80.72 Aligned_cols=59 Identities=15% Similarity=0.300 Sum_probs=51.5
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCe----EEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCC
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITA----ITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFS 64 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~----v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 64 (201)
+.+|||+|||+|.++..+++.+. . |+++|+++.+++.++++. .++++++++|+.+++++
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~~~-~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIARLA-TPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDFG 105 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHHHC-BTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCGG
T ss_pred cCEEEEEccccHHHHHHHHHhCC-CcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCChh
Confidence 46899999999999999998865 4 999999999999999884 24899999999987643
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.84 E-value=5.9e-09 Score=81.23 Aligned_cols=70 Identities=21% Similarity=0.311 Sum_probs=55.7
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCc-eeEEEec
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDC-FDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~D~v~~~ 74 (201)
+.+|||+|||+|.++..+++.+..+|+++|+++.+++.++++ . ..+++++++|+.+++++... ...|+++
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~---~~~v~~i~~D~~~~~~~~~~~~~~vv~N 102 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G---DERLEVINEDASKFPFCSLGKELKVVGN 102 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C---CTTEEEECSCTTTCCGGGSCSSEEEEEE
T ss_pred cCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c---CCCeEEEEcchhhCChhHccCCcEEEEE
Confidence 468999999999999999998645999999999999999876 2 24899999999987654311 2255554
No 275
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.75 E-value=4.3e-08 Score=86.91 Aligned_cols=115 Identities=13% Similarity=0.077 Sum_probs=75.8
Q ss_pred CCcEEEecCCCChhhHHHHhcCC----CeEEEEECCHHHHHHH--HHHHhh----cCCCceEEEEcccCCCC-CCCCcee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGI----TAITCIDLSAVAVEKM--QERLLL----KGYKEVKVLEADMLDLP-FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~----~~v~~vD~~~~~~~~~--~~~~~~----~~~~~i~~~~~d~~~~~-~~~~~~D 69 (201)
+.+|||.|||+|.++..++.... ..++|+|+++.+++.| +.++.. .+.....+...|..... ....+||
T Consensus 322 g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFD 401 (878)
T 3s1s_A 322 DEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVS 401 (878)
T ss_dssp TCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEE
T ss_pred CCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCC
Confidence 35899999999999999887642 2899999999999999 444433 22333355555555422 2346899
Q ss_pred EEEeccccceeeecCCCCCCCCC---------------------ccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQP---------------------ETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~---------------------~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
+|+++-.+... +.... ........+++.+.+.|++||++.++.+..
T Consensus 402 VVIgNPPYg~~-------~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s 468 (878)
T 3s1s_A 402 VVVMNPPYVSG-------VTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQ 468 (878)
T ss_dssp EEEECCBCCSS-------CCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETH
T ss_pred EEEECCCcccc-------ccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEEChH
Confidence 99997444110 00000 000113457889999999999999887653
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.74 E-value=2.3e-08 Score=87.06 Aligned_cols=100 Identities=17% Similarity=0.223 Sum_probs=71.9
Q ss_pred CcEEEecCCCChhhHHHHhc---CCC--eEEEEECCHHHHHHHHHHHhhcC-CCceEEEEcccCCCCCCCCceeEEEecc
Q 028957 2 TSVLELGCGNSRLSEGLYND---GIT--AITCIDLSAVAVEKMQERLLLKG-YKEVKVLEADMLDLPFSNDCFDVVIEKA 75 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~---~~~--~v~~vD~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 75 (201)
..|||+|||+|-++...+++ +.. +|+++|-++ +...+++....++ -++|+++.+|++++..+ .++|+|++=+
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEw 436 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSEL 436 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCC
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEc
Confidence 36999999999995555444 322 799999997 4556666666665 35699999999998765 6899999743
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
.=..++ + +....++....+.|||||.++
T Consensus 437 MG~fLl------------~-E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 437 LGSFAD------------N-ELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CBTTBG------------G-GCHHHHHHHHGGGEEEEEEEE
T ss_pred Cccccc------------c-cCCHHHHHHHHHhcCCCcEEc
Confidence 222221 1 233467788889999999976
No 277
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.74 E-value=1.3e-08 Score=88.82 Aligned_cols=100 Identities=18% Similarity=0.268 Sum_probs=71.5
Q ss_pred cEEEecCCCChhhHHHHhc----C---------CC-eEEEEECCHHHHHHHHHHHhhcC-CCceEEEEcccCCCCCC---
Q 028957 3 SVLELGCGNSRLSEGLYND----G---------IT-AITCIDLSAVAVEKMQERLLLKG-YKEVKVLEADMLDLPFS--- 64 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~----~---------~~-~v~~vD~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~--- 64 (201)
.|||+|||+|-++...+.+ + .. +|+++|.++.++..++.+.. ++ -++|+++.+|++++..+
T Consensus 412 VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~~~ 490 (745)
T 3ua3_A 412 VIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIAKD 490 (745)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHHHH
T ss_pred EEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccccc
Confidence 6999999999997543222 2 22 99999999977766665554 34 34699999999987653
Q ss_pred --CCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 65 --NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 65 --~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
.+++|+|++=+.=.++ ..+....++..+.+.|||||.++
T Consensus 491 ~~~ekVDIIVSElmGsfl-------------~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 491 RGFEQPDIIVSELLGSFG-------------DNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TTCCCCSEEEECCCBTTB-------------GGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CCCCcccEEEEecccccc-------------chhccHHHHHHHHHhCCCCcEEE
Confidence 4789999974331111 12345668888889999999876
No 278
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.70 E-value=7e-09 Score=80.94 Aligned_cols=71 Identities=18% Similarity=0.257 Sum_probs=55.4
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCe--EEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCC-----CceeEEEe
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITA--ITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-----DCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~--v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~~D~v~~ 73 (201)
+.+|||+|||+|.++. +.. +. + |+++|+++.+++.+++++... ++++++++|+..++++. +..+.|++
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~~~~~~~~~~~vvs 96 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGELAEKMGQPLRVFG 96 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHHHHHHHTSCEEEEE
T ss_pred cCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHHhhcccCCceEEEE
Confidence 4689999999999999 654 44 6 999999999999999876543 48999999998876432 13467777
Q ss_pred ccc
Q 028957 74 KAT 76 (201)
Q Consensus 74 ~~~ 76 (201)
+..
T Consensus 97 NlP 99 (252)
T 1qyr_A 97 NLP 99 (252)
T ss_dssp ECC
T ss_pred CCC
Confidence 644
No 279
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.70 E-value=7.5e-08 Score=75.22 Aligned_cols=110 Identities=14% Similarity=0.112 Sum_probs=70.6
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||||||+|.++..++.. +...+.++|+..++....... ...+ .++..+..++....++..++|+|+|....+
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g-~~ii~~~~~~dv~~l~~~~~DlVlsD~apn- 151 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLG-WNIITFKDKTDIHRLEPVKCDTLLCDIGES- 151 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTT-GGGEEEECSCCTTTSCCCCCSEEEECCCCC-
T ss_pred CCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCC-CCeEEEeccceehhcCCCCccEEEecCccC-
Confidence 357999999999999988776 444788888874321000000 0001 145556666554556678999999976554
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCC-cEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~ 121 (201)
++.+|.+ ......+++.+.++|+|| |.+++-.+.
T Consensus 152 ----sG~~~~D----~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 152 ----SSSSVTE----GERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp ----CSCHHHH----HHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ----cCchHHH----HHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 2333321 111224578889999999 999998887
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.70 E-value=2.5e-08 Score=85.87 Aligned_cols=112 Identities=12% Similarity=0.091 Sum_probs=78.9
Q ss_pred cEEEecCCCChhhHHHHhcC----------------CCeEEEEECCHHHHHHHHHHHhhcCCC-ceEEEEcccCCCC-CC
Q 028957 3 SVLELGCGNSRLSEGLYNDG----------------ITAITCIDLSAVAVEKMQERLLLKGYK-EVKVLEADMLDLP-FS 64 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~~----------------~~~v~~vD~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~-~~ 64 (201)
+|||.+||+|.+...+++.. ...++|+|+++.+++.|+.++...++. ++.+.++|....+ .+
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~ 326 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHP 326 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCT
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccc
Confidence 79999999999988875431 128999999999999999998777642 3334777766543 44
Q ss_pred CCceeEEEeccccceeeecCCCCCCC---------------------CCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 65 NDCFDVVIEKATMEVLFVNSGDPWNP---------------------QPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 65 ~~~~D~v~~~~~l~~~~~~~~~~~~~---------------------~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
..+||+|+++-.+..- .|.. .+.. ...-.+++.+.+.|+|||++.++.+.
T Consensus 327 ~~~fD~Iv~NPPf~~~------~~~~~~~~~d~r~~~g~~~~~~~~~~~~~-~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 327 DLRADFVMTNPPFNMK------DWWHEKLADDPRWTINTNGEKRILTPPTG-NANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp TCCEEEEEECCCSSCC------SCCCGGGTTCGGGEECCC--CEECCCCTT-CTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred cccccEEEECCCcCCc------cccchhhhhhhhhhcCcccccccccCCCc-chhHHHHHHHHHHhccCceEEEEecc
Confidence 5789999997655421 0110 0111 11126899999999999998877654
No 281
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.64 E-value=4.1e-08 Score=76.79 Aligned_cols=72 Identities=17% Similarity=0.169 Sum_probs=55.5
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc-------C-C-CceEEEEcccCCC-CCCCCceeEE
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK-------G-Y-KEVKVLEADMLDL-PFSNDCFDVV 71 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~-------~-~-~~i~~~~~d~~~~-~~~~~~~D~v 71 (201)
.+|||+|||+|..+..++..+. +|+++|.++.+...+++++... + + .+++++++|+.+. +....+||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 7899999999999999999877 8999999998766666654321 1 2 4789999998763 3222469999
Q ss_pred Eec
Q 028957 72 IEK 74 (201)
Q Consensus 72 ~~~ 74 (201)
++.
T Consensus 169 ~lD 171 (258)
T 2oyr_A 169 YLD 171 (258)
T ss_dssp EEC
T ss_pred EEc
Confidence 863
No 282
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.63 E-value=8e-08 Score=78.89 Aligned_cols=123 Identities=13% Similarity=0.151 Sum_probs=76.7
Q ss_pred CcEEEecCCCChhhHHHHhc------------C---CC-eEEEEECCHHHHHHHHHHHhhcC------------CCceEE
Q 028957 2 TSVLELGCGNSRLSEGLYND------------G---IT-AITCIDLSAVAVEKMQERLLLKG------------YKEVKV 53 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~------------~---~~-~v~~vD~~~~~~~~~~~~~~~~~------------~~~i~~ 53 (201)
.+|+|+|||+|..+..+... + +. +|+..|+....-...-+.+.... ..+-.+
T Consensus 54 ~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~f 133 (374)
T 3b5i_A 54 FTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSYF 133 (374)
T ss_dssp EEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCSE
T ss_pred eEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCceE
Confidence 47999999999988877321 1 34 89999987665555544443211 001123
Q ss_pred ---EEcccCCCCCCCCceeEEEeccccceeeecC-------CCCCCCCC----------------ccHHHHHHHHHHHhh
Q 028957 54 ---LEADMLDLPFSNDCFDVVIEKATMEVLFVNS-------GDPWNPQP----------------ETVTKVMAMLEGVHR 107 (201)
Q Consensus 54 ---~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~-------~~~~~~~~----------------~~~~~~~~~l~~~~~ 107 (201)
+.+....-.++.+++|+|+++.++|++---. ..+|++.- --..+...+|+...+
T Consensus 134 ~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~ 213 (374)
T 3b5i_A 134 VAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAA 213 (374)
T ss_dssp EEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333347889999999999998762000 01122110 001256678999999
Q ss_pred cccCCcEEEEEecCCcc
Q 028957 108 VLKPDGLFISVSFGQPH 124 (201)
Q Consensus 108 ~L~~gG~l~~~~~~~~~ 124 (201)
.|+|||++++.....+.
T Consensus 214 eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 214 EVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HEEEEEEEEEEEEECCC
T ss_pred HhCCCCEEEEEEecCCC
Confidence 99999999988775543
No 283
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.56 E-value=4.1e-07 Score=74.85 Aligned_cols=120 Identities=15% Similarity=0.065 Sum_probs=76.0
Q ss_pred cEEEecCCCChhhHHHHhc-----------------CCC-eEEEEECC-----------HHHHHHHHHHHhhcC-CCceE
Q 028957 3 SVLELGCGNSRLSEGLYND-----------------GIT-AITCIDLS-----------AVAVEKMQERLLLKG-YKEVK 52 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~-----------------~~~-~v~~vD~~-----------~~~~~~~~~~~~~~~-~~~i~ 52 (201)
+|+|+||++|..+..+... .+. .|+..|+. +...+.+.+. .+ ..+-.
T Consensus 55 ~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~g~~~~~~ 131 (384)
T 2efj_A 55 KVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---NGRKIGSC 131 (384)
T ss_dssp EEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---TCCCTTSE
T ss_pred EEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---ccCCCCce
Confidence 6999999999988877654 133 88889976 3333332221 11 01235
Q ss_pred EEEcccCC---CCCCCCceeEEEeccccceeeecC-------CCCCCCCC--------c---------cHHHHHHHHHHH
Q 028957 53 VLEADMLD---LPFSNDCFDVVIEKATMEVLFVNS-------GDPWNPQP--------E---------TVTKVMAMLEGV 105 (201)
Q Consensus 53 ~~~~d~~~---~~~~~~~~D~v~~~~~l~~~~~~~-------~~~~~~~~--------~---------~~~~~~~~l~~~ 105 (201)
|+.+...+ -.++.+++|+|+++.++|++---+ ..||++.. . -..+...+|+..
T Consensus 132 f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~R 211 (384)
T 2efj_A 132 LIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIH 211 (384)
T ss_dssp EEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555444 348899999999999999862110 11233211 0 012345568888
Q ss_pred hhcccCCcEEEEEecCCccc
Q 028957 106 HRVLKPDGLFISVSFGQPHF 125 (201)
Q Consensus 106 ~~~L~~gG~l~~~~~~~~~~ 125 (201)
.+.|+|||++++.....+..
T Consensus 212 a~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 212 SEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHEEEEEEEEEEEECCCTT
T ss_pred HHHhccCCeEEEEEecCCCc
Confidence 99999999999988766543
No 284
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.54 E-value=5.5e-07 Score=73.40 Aligned_cols=95 Identities=12% Similarity=0.050 Sum_probs=67.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
|++|||+||.+|+++..+++++. .|++||..+ +-. .+.. .+++.++++|+.....+.+.+|+|+|..+.
T Consensus 212 G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~-l~~----~l~~--~~~V~~~~~d~~~~~~~~~~~D~vvsDm~~--- 280 (375)
T 4auk_A 212 GMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP-MAQ----SLMD--TGQVTWLREDGFKFRPTRSNISWMVCDMVE--- 280 (375)
T ss_dssp TCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC-CCH----HHHT--TTCEEEECSCTTTCCCCSSCEEEEEECCSS---
T ss_pred CCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh-cCh----hhcc--CCCeEEEeCccccccCCCCCcCEEEEcCCC---
Confidence 67899999999999999999987 999999754 111 1112 258999999999877667789999986553
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
+......++.........++.++..-
T Consensus 281 -------------~p~~~~~l~~~wl~~~~~~~aI~~lK 306 (375)
T 4auk_A 281 -------------KPAKVAALMAQWLVNGWCRETIFNLK 306 (375)
T ss_dssp -------------CHHHHHHHHHHHHHTTSCSEEEEEEE
T ss_pred -------------ChHHhHHHHHHHHhccccceEEEEEE
Confidence 22444455555444444445555443
No 285
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.49 E-value=2.3e-07 Score=72.48 Aligned_cols=103 Identities=12% Similarity=0.153 Sum_probs=67.2
Q ss_pred CcEEEecCCCChhhHHHHhc-------CC------CeEEEEECCH---HHHH-----------HHHHHHhhc--------
Q 028957 2 TSVLELGCGNSRLSEGLYND-------GI------TAITCIDLSA---VAVE-----------KMQERLLLK-------- 46 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~-------~~------~~v~~vD~~~---~~~~-----------~~~~~~~~~-------- 46 (201)
.+|||+|+|+|..+..++.. .+ .+++++|..+ +.+. .+++.+..+
T Consensus 62 ~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~~ 141 (257)
T 2qy6_A 62 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 141 (257)
T ss_dssp EEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEEE
T ss_pred CEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccchh
Confidence 47999999999988776543 23 2899999876 4444 445544431
Q ss_pred ------CCCceEEEEcccCC-CC-CCC---CceeEEEeccccceeeecCCCCCCCCCccHHH-HHHHHHHHhhcccCCcE
Q 028957 47 ------GYKEVKVLEADMLD-LP-FSN---DCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-VMAMLEGVHRVLKPDGL 114 (201)
Q Consensus 47 ------~~~~i~~~~~d~~~-~~-~~~---~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~L~~gG~ 114 (201)
+..+++++.+|+.+ ++ .+. ..||+|+.. +|-+.. +.+- ...+++.+.+.|+|||+
T Consensus 142 r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD------------~fsp~~-~p~lw~~~~l~~l~~~L~pGG~ 208 (257)
T 2qy6_A 142 RLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLD------------GFAPAK-NPDMWTQNLFNAMARLARPGGT 208 (257)
T ss_dssp EEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEEC------------SSCTTT-CGGGCCHHHHHHHHHHEEEEEE
T ss_pred heeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEEC------------CCCccc-ChhhcCHHHHHHHHHHcCCCcE
Confidence 12367789999876 33 222 279999852 222111 1111 36799999999999999
Q ss_pred EEE
Q 028957 115 FIS 117 (201)
Q Consensus 115 l~~ 117 (201)
++.
T Consensus 209 l~t 211 (257)
T 2qy6_A 209 LAT 211 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 874
No 286
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.47 E-value=3.1e-07 Score=74.91 Aligned_cols=121 Identities=12% Similarity=0.106 Sum_probs=81.2
Q ss_pred cEEEecCCCChhhHHHHhc----------------CCC-eEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCC---C
Q 028957 3 SVLELGCGNSRLSEGLYND----------------GIT-AITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLD---L 61 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~----------------~~~-~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~---~ 61 (201)
+|+|+||++|..+..+... .+. .|+..|+....-..+.+.+..... .+..++.+...+ -
T Consensus 54 ~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy~r 133 (359)
T 1m6e_X 54 AIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFYGR 133 (359)
T ss_dssp CCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSSSC
T ss_pred EEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhhhc
Confidence 6899999999888766544 223 899999988777777766543110 022444444433 4
Q ss_pred CCCCCceeEEEeccccceeeecCCCCCCC-----------CC--------ccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 62 PFSNDCFDVVIEKATMEVLFVNSGDPWNP-----------QP--------ETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 62 ~~~~~~~D~v~~~~~l~~~~~~~~~~~~~-----------~~--------~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
.++.+++|+|+++.++|++- ..+....+ ++ --..+...+|+...+.|+|||++++.....
T Consensus 134 lfp~~S~d~v~Ss~aLHWls-~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~gr 212 (359)
T 1m6e_X 134 LFPRNTLHFIHSSYSLMWLS-QVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTILGR 212 (359)
T ss_dssp CSCTTCBSCEEEESCTTBCS-SCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEEEC
T ss_pred cCCCCceEEEEehhhhhhcc-cCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEecC
Confidence 58899999999999998762 11101000 00 013467788999999999999999887765
Q ss_pred cc
Q 028957 123 PH 124 (201)
Q Consensus 123 ~~ 124 (201)
+.
T Consensus 213 ~~ 214 (359)
T 1m6e_X 213 RS 214 (359)
T ss_dssp SS
T ss_pred CC
Confidence 44
No 287
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.47 E-value=4.8e-07 Score=74.02 Aligned_cols=110 Identities=21% Similarity=0.224 Sum_probs=79.0
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC--------CCceEEEEcccCCCC----CCCCce
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG--------YKEVKVLEADMLDLP----FSNDCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~--------~~~i~~~~~d~~~~~----~~~~~~ 68 (201)
+++||-+|.|.|..+.++++....+++.+|+++.+++.+++.+.... .++++++.+|+...- -..++|
T Consensus 206 pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~y 285 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREF 285 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCE
T ss_pred CCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCce
Confidence 47899999999999999998766699999999999999998764321 135889999986521 124679
Q ss_pred eEEEeccccceeeecCCCCCC-CCCc---cHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 69 DVVIEKATMEVLFVNSGDPWN-PQPE---TVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~~~~-~~~~---~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
|+|+.... +|.. ..|. ...-.+.+++.+++.|+|||.++...
T Consensus 286 DvIIvDl~---------D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 286 DYVINDLT---------AVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp EEEEEECC---------SSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred eEEEECCC---------CCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 99995321 1111 1111 12234688999999999999988643
No 288
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.43 E-value=5.4e-08 Score=76.15 Aligned_cols=110 Identities=15% Similarity=0.068 Sum_probs=68.2
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+.+|||||||+|.+++.++.. +...|.++|+...+...+... ...+ .++.....++....++..++|+|+|....+
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g-~~ii~~~~~~dv~~l~~~~~DvVLSDmApn- 167 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLG-WNLIRFKDKTDVFNMEVIPGDTLLCDIGES- 167 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTT-GGGEEEECSCCGGGSCCCCCSEEEECCCCC-
T ss_pred CCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCC-CceEEeeCCcchhhcCCCCcCEEEecCccC-
Confidence 358999999999999988865 444899999976432111100 0001 133344433332335568899999976654
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCC--cEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD--GLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g--G~l~~~~~~ 121 (201)
++.++.+ ......+++-+.++|+|| |.+++-.+.
T Consensus 168 ----sG~~~~D----~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 168 ----SPSIAVE----EQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp ----CSCHHHH----HHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ----CCChHHH----HHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 2332211 111224577788999999 999998887
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.31 E-value=2.3e-06 Score=67.57 Aligned_cols=103 Identities=14% Similarity=0.084 Sum_probs=76.3
Q ss_pred CCcEEEecCCCChhhHHHHhc----C--CCeEEEEECCHH--------------------------HHHHHHHHHhhcCC
Q 028957 1 MTSVLELGCGNSRLSEGLYND----G--ITAITCIDLSAV--------------------------AVEKMQERLLLKGY 48 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~----~--~~~v~~vD~~~~--------------------------~~~~~~~~~~~~~~ 48 (201)
+..|||+|+..|..+..++.. + ..+++++|..+. .++.++++++..++
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 358999999999988887653 1 238999996321 36678888888775
Q ss_pred --CceEEEEcccCC-CC-CCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 49 --KEVKVLEADMLD-LP-FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 49 --~~i~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++++++.+|+.+ ++ .+.++||+|+...- ..+.....++.+.+.|+|||.+++-..
T Consensus 187 ~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD-----------------~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD-----------------LYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CSTTEEEEESCHHHHSTTCCCCCEEEEEECCC-----------------SHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC-----------------ccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 689999999875 33 44567898885321 124456889999999999999887554
No 290
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.25 E-value=9.7e-07 Score=62.50 Aligned_cols=87 Identities=13% Similarity=0.154 Sum_probs=60.1
Q ss_pred CCcEEEecCCCC-hhhHHHHh-cCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCC-CceeEEEecccc
Q 028957 1 MTSVLELGCGNS-RLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSN-DCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G-~~~~~l~~-~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~D~v~~~~~l 77 (201)
+.+|||+|||+| ..+..+++ .+. .|+++|+++..++ +++.|+++..... ..||+|.+..
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~---------------~v~dDiF~P~~~~Y~~~DLIYsir-- 97 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG---------------IVRDDITSPRMEIYRGAALIYSIR-- 97 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT---------------EECCCSSSCCHHHHTTEEEEEEES--
T ss_pred CCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc---------------eEEccCCCCcccccCCcCEEEEcC--
Confidence 358999999999 69999987 777 8999999886443 7889988733211 3799997632
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
...++...+.++.+.. |.-+++......
T Consensus 98 ----------------PP~El~~~i~~lA~~v--~adliI~pL~~E 125 (153)
T 2k4m_A 98 ----------------PPAEIHSSLMRVADAV--GARLIIKPLTGE 125 (153)
T ss_dssp ----------------CCTTTHHHHHHHHHHH--TCEEEEECBTTB
T ss_pred ----------------CCHHHHHHHHHHHHHc--CCCEEEEcCCCC
Confidence 2245555555555543 456776665543
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.23 E-value=6.2e-06 Score=64.96 Aligned_cols=110 Identities=17% Similarity=0.193 Sum_probs=66.4
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+++||||||++|.++..+++. +...|.++|+...+...... ....+ .++.....++....+....+|+|++....+
T Consensus 82 g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~-~~iv~~~~~~di~~l~~~~~DlVlsD~APn- 158 (300)
T 3eld_A 82 TGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLG-WNIVKFKDKSNVFTMPTEPSDTLLCDIGES- 158 (300)
T ss_dssp CEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTT-GGGEEEECSCCTTTSCCCCCSEEEECCCCC-
T ss_pred CCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccC-CceEEeecCceeeecCCCCcCEEeecCcCC-
Confidence 468999999999999999976 44489999986532100000 00001 123333333322334567899999865543
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCC-cEEEEEecC
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSFG 121 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~ 121 (201)
++.+.. .......+++-+.++|+|| |.|++-.+.
T Consensus 159 ----sG~~~~----D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 159 ----SSNPLV----ERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp ----CSSHHH----HHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred ----CCCHHH----HHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 122110 0111235577788999999 999998887
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.20 E-value=4e-06 Score=65.86 Aligned_cols=68 Identities=16% Similarity=0.264 Sum_probs=57.1
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----CCCCceeEEEe
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FSNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D~v~~ 73 (201)
+..++|++||.|+.+..+++.+. +|+|+|.++.+++.+++ +.. +++.+++++..++. ...+++|.|++
T Consensus 23 gg~~VD~T~G~GGHS~~il~~~g-~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILERGG-RVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALGVERVDGILA 95 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCEEEEeCCCCcHHHHHHHHCCC-EEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcCCCCcCEEEe
Confidence 46799999999999999999843 99999999999999998 654 48999999988753 22357999985
No 293
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.19 E-value=1.1e-05 Score=69.18 Aligned_cols=118 Identities=21% Similarity=0.215 Sum_probs=77.5
Q ss_pred CCcEEEecCCCChhhHHHHhc----C----------CCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----
Q 028957 1 MTSVLELGCGNSRLSEGLYND----G----------ITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---- 62 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~----~----------~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---- 62 (201)
+.+|+|-+||+|++...+.+. . ...++|+|+++.+...++.++...+.....+..+|....+
T Consensus 218 ~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~ 297 (530)
T 3ufb_A 218 GESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREM 297 (530)
T ss_dssp TCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGC
T ss_pred CCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhhh
Confidence 468999999999998877653 1 1269999999999999999887777666677888866533
Q ss_pred CCCCceeEEEeccccceeeec---CCCCCCCCCccHHHHHHHHHHHhhccc-------CCcEEEEEec
Q 028957 63 FSNDCFDVVIEKATMEVLFVN---SGDPWNPQPETVTKVMAMLEGVHRVLK-------PDGLFISVSF 120 (201)
Q Consensus 63 ~~~~~~D~v~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~L~-------~gG~l~~~~~ 120 (201)
.+..+||+|+++-.+..-.-. ...|. ..........+++.+.+.|+ +||++.++.+
T Consensus 298 ~~~~~fD~Il~NPPf~~~~~~~~~~~~~~--~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 298 GDKDRVDVILTNPPFGGEEEKGILGNFPE--DMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp CGGGCBSEEEECCCSSCBCCHHHHTTSCG--GGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred cccccceEEEecCCCCccccccccccCch--hcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 223579999997555321000 00000 00011123456777777776 7999887754
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.02 E-value=1.3e-05 Score=63.74 Aligned_cols=45 Identities=16% Similarity=0.040 Sum_probs=41.2
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK 46 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~ 46 (201)
|+.|||++||+|..+..++..+. +++|+|+++.+++.+++++...
T Consensus 236 ~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 236 GDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp TCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 57899999999999999998887 9999999999999999998654
No 295
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.89 E-value=9.2e-06 Score=63.84 Aligned_cols=99 Identities=11% Similarity=0.089 Sum_probs=73.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC-CC---CCCCceeEEEeccc
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LP---FSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~---~~~~~~D~v~~~~~ 76 (201)
+..+||+-+|||.++.++++.+ .+++.+|.++...+..++++.. .++++++..|+.. +. .+..+||+|++
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~~-d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi--- 165 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRSQ-DRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFI--- 165 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCTT-SEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEE---
T ss_pred CCCceeEeCCcHHHHHHHcCCC-CeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEE---
Confidence 3568999999999999999855 6999999999999999998865 2579999999754 21 23346999996
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhh--cccCCcEEEE
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHR--VLKPDGLFIS 117 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~L~~gG~l~~ 117 (201)
++|+- ...+..++++.+.+ .+.++|.+++
T Consensus 166 --------DPPYe----~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 166 --------DPSYE----RKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp --------CCCCC----STTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred --------CCCCC----CCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 34452 12456666666655 3468888765
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.88 E-value=1.1e-05 Score=61.52 Aligned_cols=111 Identities=20% Similarity=0.223 Sum_probs=70.0
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEc-ccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA-DMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+|+||||++|.++..++.. +..+|+++|+...-.+.-+ .....+.+.+.+.++ |+..++ ..++|+|+|...=
T Consensus 79 g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~gwn~v~fk~gvDv~~~~--~~~~DtllcDIge- 154 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYGWNIVKLMSGKDVFYLP--PEKCDTLLCDIGE- 154 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTTTTSEEEECSCCGGGCC--CCCCSEEEECCCC-
T ss_pred CCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcCcCceEEEeccceeecC--CccccEEEEecCC-
Confidence 358999999999999977665 5559999998653211000 011223457899999 986654 3669999985321
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
.++.|+. ......++|+-+.+.|++ |.+++-.+.+..
T Consensus 155 ----Ss~~~~v----E~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 155 ----SSPSPTV----EESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp ----CCSCHHH----HHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred ----CCCChhh----hhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 1122211 111223477777899998 777777666544
No 297
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.88 E-value=6.4e-06 Score=63.60 Aligned_cols=109 Identities=17% Similarity=0.186 Sum_probs=61.6
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhh-cCCCceEEEEc-ccCCCCCCCCceeEEEecccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLL-KGYKEVKVLEA-DMLDLPFSNDCFDVVIEKATM 77 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~-~~~~~i~~~~~-d~~~~~~~~~~~D~v~~~~~l 77 (201)
|.+|+||||++|.+++.+++. +...|.|.++..+. ........ .+..-+.+.++ |+..++ ..++|+|+|...-
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~--~~~P~~~~~~Gv~~i~~~~G~Df~~~~--~~~~DvVLSDMAP 149 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG--HEEPMLMQSYGWNIVTMKSGVDVFYKP--SEISDTLLCDIGE 149 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT--SCCCCCCCSTTGGGEEEECSCCGGGSC--CCCCSEEEECCCC
T ss_pred CCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc--ccCCCcccCCCceEEEeeccCCccCCC--CCCCCEEEeCCCC
Confidence 568999999999999999886 11133444432220 00000000 11112355557 988743 4579999985432
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCc-EEEEEecCC
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDG-LFISVSFGQ 122 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG-~l~~~~~~~ 122 (201)
. ++.+..+ + .....+++-+.++|+||| .+++-.+..
T Consensus 150 n-----SG~~~vD---~-~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 150 S-----SPSAEIE---E-QRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp C-----CSCHHHH---H-HHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred C-----CCccHHH---H-HHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 1 2221100 1 111125677778999999 888888874
No 298
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.80 E-value=5.2e-05 Score=59.65 Aligned_cols=110 Identities=18% Similarity=0.246 Sum_probs=67.8
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEc-ccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA-DMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+.+||||||++|.++..++.. +...|+|+|+...--+.-+ .....+.+-+.++.+ |+..++. ..+|+|+|... .
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~ql~w~lV~~~~~~Dv~~l~~--~~~D~ivcDig-e 170 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQSYGWNIVTMKSGVDVFYRPS--ECCDTLLCDIG-E 170 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCBTTGGGEEEECSCCTTSSCC--CCCSEEEECCC-C
T ss_pred CCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhhcCCcceEEEeccCHhhCCC--CCCCEEEEECc-c
Confidence 358999999999999966655 5558999998653110000 000111234777777 8766553 56999998533 1
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCC-cEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~~ 122 (201)
.++.|+. ......++|+-+.+.|++| |-+++-.+.+
T Consensus 171 ----Ss~~~~v----e~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 171 ----SSSSAEV----EEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp ----CCSCHHH----HHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred ----CCCChhh----hhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 1222221 1112234777778899988 8888877766
No 299
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.58 E-value=2.3e-05 Score=77.87 Aligned_cols=101 Identities=19% Similarity=0.168 Sum_probs=52.4
Q ss_pred CcEEEecCCCChhhHHHHhc-C-----CCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-CCCCCceeEEEec
Q 028957 2 TSVLELGCGNSRLSEGLYND-G-----ITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-PFSNDCFDVVIEK 74 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~-~-----~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~D~v~~~ 74 (201)
.+|||+|+|+|..+..+... + ..+++.+|+++...+.++++++.. .+.....|..+. ++....||+|++.
T Consensus 1242 ~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~---di~~~~~d~~~~~~~~~~~ydlvia~ 1318 (2512)
T 2vz8_A 1242 MKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL---HVTQGQWDPANPAPGSLGKADLLVCN 1318 (2512)
T ss_dssp EEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---TEEEECCCSSCCCC-----CCEEEEE
T ss_pred ceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---ccccccccccccccCCCCceeEEEEc
Confidence 37999999999877665443 1 238999999988777777766542 222222233221 2345679999999
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++|.. .+....+.+++++|+|||.+++.+.
T Consensus 1319 ~vl~~t---------------~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1319 CALATL---------------GDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp CC-----------------------------------CCEEEEEEC
T ss_pred cccccc---------------ccHHHHHHHHHHhcCCCcEEEEEec
Confidence 988765 5667899999999999999888653
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.55 E-value=0.00016 Score=58.82 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=48.9
Q ss_pred CcEEEecCCCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC
Q 028957 2 TSVLELGCGNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL 61 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 61 (201)
+.|||+|+|.|.+|..+++. .+.+|+++|+++..+...++.+ . .++++++.+|+.++
T Consensus 60 ~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~--~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 60 LKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E--GSPLQILKRDPYDW 117 (353)
T ss_dssp CEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T--TSSCEEECSCTTCH
T ss_pred CEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c--CCCEEEEECCccch
Confidence 67999999999999999986 3448999999999999998876 2 35899999999654
No 301
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.31 E-value=0.00042 Score=56.91 Aligned_cols=68 Identities=18% Similarity=0.207 Sum_probs=55.6
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC---C-----CCCceeEEEe
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---F-----SNDCFDVVIE 73 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~-----~~~~~D~v~~ 73 (201)
.++|||.||.|.++..+.++|...+.++|+++.+++..+.|+ ++..++++|+.++. + ....+|+++.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 479999999999999999999878889999999998888775 35577888988753 1 2457899985
Q ss_pred c
Q 028957 74 K 74 (201)
Q Consensus 74 ~ 74 (201)
.
T Consensus 78 g 78 (376)
T 3g7u_A 78 G 78 (376)
T ss_dssp C
T ss_pred c
Confidence 3
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.25 E-value=0.00094 Score=52.62 Aligned_cols=105 Identities=11% Similarity=0.017 Sum_probs=66.3
Q ss_pred CCcEEEecC------CCChhhHHHHhcCCC--eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEE
Q 028957 1 MTSVLELGC------GNSRLSEGLYNDGIT--AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~------G~G~~~~~l~~~~~~--~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~ 72 (201)
|++|||+|| -+|.. .+.+.++. .|+++|+.+-. .... .++++|...... .++||+|+
T Consensus 110 gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~-----------sda~-~~IqGD~~~~~~-~~k~DLVI 174 (344)
T 3r24_A 110 NMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV-----------SDAD-STLIGDCATVHT-ANKWDLII 174 (344)
T ss_dssp TCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB-----------CSSS-EEEESCGGGEEE-SSCEEEEE
T ss_pred CCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc-----------cCCC-eEEEcccccccc-CCCCCEEE
Confidence 579999997 45653 23333443 89999996521 0112 459999766433 47899999
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCcc
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQPH 124 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 124 (201)
+...-.. ++.--.+..+...-.+.+++-+.+.|+|||.|++-.+....
T Consensus 175 SDMAPNt----TG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg 222 (344)
T 3r24_A 175 SDMYDPR----TKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 222 (344)
T ss_dssp ECCCCTT----SCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred ecCCCCc----CCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCC
Confidence 7533211 11111111123335677888889999999999998887665
No 303
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.07 E-value=0.00033 Score=56.77 Aligned_cols=68 Identities=21% Similarity=0.317 Sum_probs=53.8
Q ss_pred CcEEEecCCCChhhHHHHhcC--CCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC---CCCceeEEEec
Q 028957 2 TSVLELGCGNSRLSEGLYNDG--ITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF---SNDCFDVVIEK 74 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~D~v~~~ 74 (201)
.+|||+.||.|.++..+.+.| ...|.++|+++.+++..+.|+. +..++.+|+.++.. +...+|+++..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~g 75 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILMS 75 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEEC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEEc
Confidence 479999999999999999988 4489999999999999988864 33567888877531 11258999864
No 304
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.07 E-value=0.0013 Score=52.96 Aligned_cols=66 Identities=15% Similarity=0.101 Sum_probs=52.3
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC-CCCceeEEEec
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF-SNDCFDVVIEK 74 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~v~~~ 74 (201)
.+++|+.||.|.++..+.+.|...+.++|+++.+++..+.++.... .+|+.++.. ....+|+++..
T Consensus 12 ~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~~-------~~Di~~~~~~~~~~~D~l~~g 78 (327)
T 2c7p_A 12 LRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEKP-------EGDITQVNEKTIPDHDILCAG 78 (327)
T ss_dssp CEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCCC-------BSCGGGSCGGGSCCCSEEEEE
T ss_pred CcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCCC-------cCCHHHcCHhhCCCCCEEEEC
Confidence 5799999999999999999998789999999999999998874321 577776531 11358999864
No 305
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.05 E-value=0.0015 Score=52.51 Aligned_cols=69 Identities=12% Similarity=0.079 Sum_probs=53.7
Q ss_pred CCcEEEecCCCChhhHHHHhc-CCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----CC-CCceeEEE
Q 028957 1 MTSVLELGCGNSRLSEGLYND-GIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-NDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~-~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~-~~~~D~v~ 72 (201)
|..++|..||.|+.+..+++. ++. +|+|+|.++.+++.++ ++. .+++.++.++...+. .. .+++|.|+
T Consensus 58 ggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~---~~Rv~lv~~nF~~l~~~L~~~g~~~~vDgIL 133 (347)
T 3tka_A 58 DGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID---DPRFSIIHGPFSALGEYVAERDLIGKIDGIL 133 (347)
T ss_dssp TCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC---CTTEEEEESCGGGHHHHHHHTTCTTCEEEEE
T ss_pred CCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc---CCcEEEEeCCHHHHHHHHHhcCCCCcccEEE
Confidence 467999999999999999987 444 9999999999999884 442 258899999877642 11 13588888
Q ss_pred e
Q 028957 73 E 73 (201)
Q Consensus 73 ~ 73 (201)
.
T Consensus 134 f 134 (347)
T 3tka_A 134 L 134 (347)
T ss_dssp E
T ss_pred E
Confidence 5
No 306
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=96.89 E-value=0.013 Score=47.22 Aligned_cols=107 Identities=20% Similarity=0.195 Sum_probs=75.5
Q ss_pred CcEEEecCCCChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcC---------------------CCceEEEEcccC
Q 028957 2 TSVLELGCGNSRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKG---------------------YKEVKVLEADML 59 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~---------------------~~~i~~~~~d~~ 59 (201)
..|+.||||.......+...+.. .++=+|. +++++.-++.+...+ .++..++..|+.
T Consensus 99 ~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~DL~ 177 (334)
T 1rjd_A 99 VQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACDLN 177 (334)
T ss_dssp EEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECCTT
T ss_pred cEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecCCC
Confidence 46999999999988888765333 6677776 777777666665531 247889999987
Q ss_pred CCC--------C-CCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCCc
Q 028957 60 DLP--------F-SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQP 123 (201)
Q Consensus 60 ~~~--------~-~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 123 (201)
+.. . ......++++-.++.++ ..+...++++.+.... |+|.+++.+...+
T Consensus 178 d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL-------------~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 178 DITETTRLLDVCTKREIPTIVISECLLCYM-------------HNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp CHHHHHHHHHTTCCTTSCEEEEEESCGGGS-------------CHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred CcHHHHHHHHhcCCCCCCEEEEEcchhhCC-------------CHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 631 1 23456788887888776 5577889999988876 7788766554433
No 307
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.59 E-value=0.0041 Score=49.73 Aligned_cols=66 Identities=15% Similarity=0.206 Sum_probs=53.0
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC-CCCceeEEEe
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF-SNDCFDVVIE 73 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~D~v~~ 73 (201)
.+||||.||.|+++.-+.+.|...+.++|+++.+++.-+.|.. -.++.+|+.++.. .-...|+++.
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~------~~~~~~DI~~i~~~~~~~~D~l~g 67 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS------AKLIKGDISKISSDEFPKCDGIIG 67 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC------SEEEESCGGGCCGGGSCCCSEEEC
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC------CCcccCChhhCCHhhCCcccEEEe
Confidence 4799999999999999988998888999999999888887752 2567889887642 1235798885
No 308
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.41 E-value=0.011 Score=47.99 Aligned_cols=93 Identities=16% Similarity=0.193 Sum_probs=60.9
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC----C-CCCCCceeEEEe
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD----L-PFSNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~----~-~~~~~~~D~v~~ 73 (201)
|++||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. +.. .++..+-.+ + ....+.+|+|+.
T Consensus 191 g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~--~vi~~~~~~~~~~~~~~~~gg~D~vid 264 (371)
T 1f8f_A 191 ASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL----GAT--HVINSKTQDPVAAIKEITDGGVNFALE 264 (371)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH----TCS--EEEETTTSCHHHHHHHHTTSCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc----CCC--EEecCCccCHHHHHHHhcCCCCcEEEE
Confidence 57899999876 7777777775 554799999999988887653 221 122211111 0 111236999985
Q ss_pred ccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
... ....++...+.|+++|++++...
T Consensus 265 ~~g---------------------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 265 STG---------------------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp CSC---------------------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCC---------------------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 321 13467788899999999887654
No 309
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.34 E-value=0.0037 Score=50.37 Aligned_cols=68 Identities=18% Similarity=0.312 Sum_probs=52.6
Q ss_pred CcEEEecCCCChhhHHHHhcCC--CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC---CCCCceeEEEec
Q 028957 2 TSVLELGCGNSRLSEGLYNDGI--TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---FSNDCFDVVIEK 74 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~--~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~v~~~ 74 (201)
.+++|+.||.|.++..+.+.|. ..+.++|+++.+++..+.|+. ...++.+|+.++. ++...+|+++..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEec
Confidence 3799999999999999988886 478999999999988888764 3345678887653 222358998853
No 310
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.32 E-value=0.011 Score=46.89 Aligned_cols=68 Identities=19% Similarity=0.069 Sum_probs=53.2
Q ss_pred CcEEEecCCCChhhHHHHhcCCCe--EEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC---C-CCceeEEEec
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITA--ITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF---S-NDCFDVVIEK 74 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~--v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~-~~~~D~v~~~ 74 (201)
.+++|+.||.|.++..+.+.|... |.++|+++..++..+.+.. ...++.+|+.++.. + .+.+|+++..
T Consensus 17 ~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~-----~~~~~~~DI~~i~~~~i~~~~~~Dll~gg 90 (295)
T 2qrv_A 17 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ-----GKIMYVGDVRSVTQKHIQEWGPFDLVIGG 90 (295)
T ss_dssp EEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT-----TCEEEECCGGGCCHHHHHHTCCCSEEEEC
T ss_pred CEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC-----CCceeCCChHHccHHHhcccCCcCEEEec
Confidence 479999999999999999998864 7999999999888777642 34678889887641 1 1368999864
No 311
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.31 E-value=0.01 Score=49.12 Aligned_cols=59 Identities=12% Similarity=0.142 Sum_probs=47.1
Q ss_pred CCcEEEecCCCChhhHHHH-hcCC--CeEEEEECCHHHHHHHHHHHhh---cCC-CceEEEEcccC
Q 028957 1 MTSVLELGCGNSRLSEGLY-NDGI--TAITCIDLSAVAVEKMQERLLL---KGY-KEVKVLEADML 59 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~-~~~~--~~v~~vD~~~~~~~~~~~~~~~---~~~-~~i~~~~~d~~ 59 (201)
+..|+|+||+.|..+..++ ..+. .+|+++|+++...+.+++++.. ++. +++.++..-+.
T Consensus 227 ~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 227 SEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp SCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 4689999999999999887 4432 4999999999999999999886 235 67777665544
No 312
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.30 E-value=0.0045 Score=49.76 Aligned_cols=66 Identities=14% Similarity=0.135 Sum_probs=51.3
Q ss_pred cEEEecCCCChhhHHHHhcCC--CeE-EEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC---CCCCceeEEEec
Q 028957 3 SVLELGCGNSRLSEGLYNDGI--TAI-TCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---FSNDCFDVVIEK 74 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~~~--~~v-~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~~~~~D~v~~~ 74 (201)
+++|+.||.|.++..+.+.|. ..+ .++|+++.+++..+.|+... ++.+|+.++. ++...+|+++..
T Consensus 12 ~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~------~~~~DI~~~~~~~i~~~~~Dil~gg 83 (327)
T 3qv2_A 12 NVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE------VQVKNLDSISIKQIESLNCNTWFMS 83 (327)
T ss_dssp EEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC------CBCCCTTTCCHHHHHHTCCCEEEEC
T ss_pred EEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC------cccCChhhcCHHHhccCCCCEEEec
Confidence 799999999999999998885 467 79999999999998887432 4567777653 222258998863
No 313
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.27 E-value=0.005 Score=49.36 Aligned_cols=46 Identities=11% Similarity=0.018 Sum_probs=40.9
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG 47 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~ 47 (201)
|+.|||..||+|+.+....+.+. +++++|+++...+.+++++...+
T Consensus 253 ~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 253 DDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp TCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcc
Confidence 57899999999999999888887 99999999999999998876543
No 314
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.10 E-value=0.15 Score=40.43 Aligned_cols=105 Identities=11% Similarity=0.052 Sum_probs=73.0
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcC---CCceEEEEcccCCCC---------CCCCcee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKG---YKEVKVLEADMLDLP---------FSNDCFD 69 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~---~~~i~~~~~d~~~~~---------~~~~~~D 69 (201)
..|++||||-=.....+.......++=+| .+.+++..++.+...+ ..+..++..|+.+ . +.....=
T Consensus 104 ~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt 181 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSART 181 (310)
T ss_dssp CEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSCE
T ss_pred CeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCCE
Confidence 46899999876554444321112788888 5999988888886432 2467889999876 2 2223344
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
++++-++++++ ..+...++++.+...+.||+.+++....
T Consensus 182 ~~i~Egvl~Yl-------------~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 182 AWLAEGLLMYL-------------PATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp EEEECSCGGGS-------------CHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred EEEEechHhhC-------------CHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 66677788776 4467889999999998899888876544
No 315
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.09 E-value=0.042 Score=44.36 Aligned_cols=96 Identities=15% Similarity=0.119 Sum_probs=62.3
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEE-----cccCC-C--CCCCCceeE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE-----ADMLD-L--PFSNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~-----~d~~~-~--~~~~~~~D~ 70 (201)
|++||-.|+|. |.++..+++. |...|+++|.+++..+.+++. ... -+.+.. .|... + ......+|+
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~---~~~~~~~~~~~~~~~~~v~~~t~g~g~Dv 255 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE---VVTHKVERLSAEESAKKIVESFGGIEPAV 255 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT---CEEEECCSCCHHHHHHHHHHHTSSCCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh---cccccccccchHHHHHHHHHHhCCCCCCE
Confidence 57899999876 7777777776 553599999999999988865 221 122221 11110 0 012347899
Q ss_pred EEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
|+-...- ...++...+.|+++|++++....
T Consensus 256 vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 256 ALECTGV---------------------ESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp EEECSCC---------------------HHHHHHHHHHSCTTCEEEECCCC
T ss_pred EEECCCC---------------------hHHHHHHHHHhcCCCEEEEEccC
Confidence 9853211 24677788999999999887543
No 316
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=96.00 E-value=0.0076 Score=48.26 Aligned_cols=44 Identities=18% Similarity=0.159 Sum_probs=38.6
Q ss_pred CCcEEEecCCCChhhHHHHhcCCCeEEEEECCH---HHHHHHHHHHhh
Q 028957 1 MTSVLELGCGNSRLSEGLYNDGITAITCIDLSA---VAVEKMQERLLL 45 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~---~~~~~~~~~~~~ 45 (201)
|+.|||..||+|+.+......+. +.+++|+++ ..++.+++++..
T Consensus 243 ~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 243 GSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp TCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHH
Confidence 57899999999999999988887 999999999 999999888754
No 317
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.97 E-value=0.021 Score=46.04 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=61.1
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-----C-CCCCceeEEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----P-FSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~-~~~~~~D~v~ 72 (201)
|++||-+|+|. |.++..+++. |..+|+++|.+++.++.+++. +.. .++..+-.+. . .....+|+|+
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~v~~~t~g~g~D~v~ 240 (352)
T 3fpc_A 167 GDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY----GAT--DIINYKNGDIVEQILKATDGKGVDKVV 240 (352)
T ss_dssp TCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH----TCC--EEECGGGSCHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh----CCc--eEEcCCCcCHHHHHHHHcCCCCCCEEE
Confidence 57899999876 7778888776 444899999999888877653 221 1221111110 0 1234699998
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
....- ...++...+.|+++|+++.....
T Consensus 241 d~~g~---------------------~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 241 IAGGD---------------------VHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp ECSSC---------------------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred ECCCC---------------------hHHHHHHHHHHhcCCEEEEeccc
Confidence 53211 13677788899999999877543
No 318
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.85 E-value=0.039 Score=44.79 Aligned_cols=94 Identities=23% Similarity=0.256 Sum_probs=61.1
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEE---cccCC-C-C---CCCCceeE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE---ADMLD-L-P---FSNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~---~d~~~-~-~---~~~~~~D~ 70 (201)
|++||-.|+|. |..+..+++. |..+|+++|.+++..+.+++. +... ++. .|... + . ...+.+|+
T Consensus 183 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----Ga~~--vi~~~~~~~~~~i~~~~~~~~gg~Dv 256 (370)
T 4ej6_A 183 GSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV----GATA--TVDPSAGDVVEAIAGPVGLVPGGVDV 256 (370)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCSE--EECTTSSCHHHHHHSTTSSSTTCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCCE--EECCCCcCHHHHHHhhhhccCCCCCE
Confidence 57899999876 7777777776 555899999999988877653 3221 111 11100 0 1 22347999
Q ss_pred EEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
|+-... ....++...+.|+++|++++....
T Consensus 257 vid~~G---------------------~~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 257 VIECAG---------------------VAETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp EEECSC---------------------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred EEECCC---------------------CHHHHHHHHHHhccCCEEEEEecc
Confidence 985321 134677888999999999876543
No 319
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.75 E-value=0.018 Score=47.24 Aligned_cols=106 Identities=11% Similarity=0.123 Sum_probs=61.0
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC------C-CCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL------P-FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~------~-~~~~~~D~v 71 (201)
|++||.+|||. |.++..+++. |..+|+++|.+++.++.+++ .+. .++..+-.+. . .....+|+|
T Consensus 186 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa---~~i~~~~~~~~~~~~~~~~~g~g~Dvv 258 (398)
T 2dph_A 186 GSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD----AGF---ETIDLRNSAPLRDQIDQILGKPEVDCG 258 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT----TTC---EEEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCC---cEEcCCCcchHHHHHHHHhCCCCCCEE
Confidence 57899999976 7788888775 55589999999988877753 232 2222111111 0 112369999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+....-.... . .+ ..........++...+.|+++|++++...
T Consensus 259 id~~g~~~~~-~-----~~-~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 259 VDAVGFEAHG-L-----GD-EANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EECSCTTCBC-S-----GG-GTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred EECCCCcccc-c-----cc-cccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 8532211000 0 00 00000012367788899999999886643
No 320
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=95.70 E-value=0.011 Score=49.96 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=46.0
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL 61 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 61 (201)
-+++|+.||.|+++.-+.+.|...|.++|+++.+++.-+.++... +...++.+|+.++
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~--p~~~~~~~DI~~i 146 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCD--PATHHFNEDIRDI 146 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCC--TTTCEEESCTHHH
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccC--CCcceeccchhhh
Confidence 369999999999999998888877999999999988888775321 2345677887654
No 321
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.51 E-value=0.0082 Score=48.73 Aligned_cols=90 Identities=11% Similarity=0.213 Sum_probs=58.7
Q ss_pred CcEEEec-CCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEc--ccC-CC-CCCCCceeEEEec
Q 028957 2 TSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA--DML-DL-PFSNDCFDVVIEK 74 (201)
Q Consensus 2 ~~vLDlG-~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~--d~~-~~-~~~~~~~D~v~~~ 74 (201)
++||-.| +|. |..+..+++. +..+|++++.+++.++.+++ .+.+. ++.. |.. .+ ....+.+|+|+..
T Consensus 173 ~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~----lGad~--vi~~~~~~~~~v~~~~~~g~Dvvid~ 246 (363)
T 4dvj_A 173 PAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS----LGAHH--VIDHSKPLAAEVAALGLGAPAFVFST 246 (363)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH----TTCSE--EECTTSCHHHHHHTTCSCCEEEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH----cCCCE--EEeCCCCHHHHHHHhcCCCceEEEEC
Confidence 5788888 554 8888888875 44499999999988887764 23221 1111 110 00 1234579998853
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
.. ....++.+.+.|+++|+++++
T Consensus 247 ~g---------------------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 247 TH---------------------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp SC---------------------HHHHHHHHHHHSCTTCEEEEC
T ss_pred CC---------------------chhhHHHHHHHhcCCCEEEEE
Confidence 21 134677888999999999876
No 322
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.43 E-value=0.1 Score=40.30 Aligned_cols=105 Identities=13% Similarity=0.145 Sum_probs=68.2
Q ss_pred CcEEEecCCCChhhHHHHhc-------CC-CeEEEEE-----CCH----------------------HHHHHHHH---HH
Q 028957 2 TSVLELGCGNSRLSEGLYND-------GI-TAITCID-----LSA----------------------VAVEKMQE---RL 43 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~-------~~-~~v~~vD-----~~~----------------------~~~~~~~~---~~ 43 (201)
..|+|+|+-.|..+..++.. +. .+++++| ..+ +.++...+ +.
T Consensus 71 G~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~ 150 (257)
T 3tos_A 71 GVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECS 150 (257)
T ss_dssp SEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTT
T ss_pred CeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhh
Confidence 56999999999988776542 22 3999999 221 11222111 11
Q ss_pred hhcC--CCceEEEEcccCCC-C-----CCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEE
Q 028957 44 LLKG--YKEVKVLEADMLDL-P-----FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLF 115 (201)
Q Consensus 44 ~~~~--~~~i~~~~~d~~~~-~-----~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l 115 (201)
...+ .+++.++.+++.+. + .+..++|++....- ..+.....++.+...|+|||.+
T Consensus 151 ~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D-----------------~Y~~t~~~le~~~p~l~~GGvI 213 (257)
T 3tos_A 151 DFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD-----------------LYEPTKAVLEAIRPYLTKGSIV 213 (257)
T ss_dssp STTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC-----------------CHHHHHHHHHHHGGGEEEEEEE
T ss_pred hhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc-----------------ccchHHHHHHHHHHHhCCCcEE
Confidence 1222 26799999998752 2 23457899885321 1245677899999999999999
Q ss_pred EEEecCCc
Q 028957 116 ISVSFGQP 123 (201)
Q Consensus 116 ~~~~~~~~ 123 (201)
++-++..+
T Consensus 214 v~DD~~~~ 221 (257)
T 3tos_A 214 AFDELDNP 221 (257)
T ss_dssp EESSTTCT
T ss_pred EEcCCCCC
Confidence 98776543
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.42 E-value=0.042 Score=44.27 Aligned_cols=93 Identities=22% Similarity=0.213 Sum_probs=59.8
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcc------cC-CC-CCCCCceeE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD------ML-DL-PFSNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d------~~-~~-~~~~~~~D~ 70 (201)
|++||-+|+|. |..+..+++. |..+|+++|.+++..+.+++ .+.+ .++..+ .. .+ ......+|+
T Consensus 172 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~vi~~~~~~~~~~~~~i~~~~~~g~D~ 245 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----IGAD--LVLQISKESPQEIARKVEGQLGCKPEV 245 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTCS--EEEECSSCCHHHHHHHHHHHHTSCCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----hCCC--EEEcCcccccchHHHHHHHHhCCCCCE
Confidence 57899999876 7777777775 54489999999988877764 2332 222211 10 00 001146899
Q ss_pred EEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
|+..... ...++...+.|+++|+++....
T Consensus 246 vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 246 TIECTGA---------------------EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp EEECSCC---------------------HHHHHHHHHHSCTTCEEEECSC
T ss_pred EEECCCC---------------------hHHHHHHHHHhcCCCEEEEEec
Confidence 9853211 2456778899999999987654
No 324
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.23 E-value=0.02 Score=46.00 Aligned_cols=90 Identities=16% Similarity=0.150 Sum_probs=60.3
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
|++||-+|+|. |..+..+++. |. +|++++.+++..+.+++ .+... ++ .+...+ . ..+|+|+....-
T Consensus 177 g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~~--v~-~~~~~~--~-~~~D~vid~~g~- 244 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS----MGVKH--FY-TDPKQC--K-EELDFIISTIPT- 244 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH----TTCSE--EE-SSGGGC--C-SCEEEEEECCCS-
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh----cCCCe--ec-CCHHHH--h-cCCCEEEECCCc-
Confidence 57899999876 7777777775 55 99999999888877754 33322 22 333222 2 278999853221
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecCC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFGQ 122 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 122 (201)
...++...+.|+++|+++......
T Consensus 245 --------------------~~~~~~~~~~l~~~G~iv~~G~~~ 268 (348)
T 3two_A 245 --------------------HYDLKDYLKLLTYNGDLALVGLPP 268 (348)
T ss_dssp --------------------CCCHHHHHTTEEEEEEEEECCCCC
T ss_pred --------------------HHHHHHHHHHHhcCCEEEEECCCC
Confidence 124567788999999999875443
No 325
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.23 E-value=0.18 Score=34.75 Aligned_cols=94 Identities=19% Similarity=0.258 Sum_probs=56.4
Q ss_pred CcEEEecCCC-Chh-hHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----CCCCceeEEEecc
Q 028957 2 TSVLELGCGN-SRL-SEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIEKA 75 (201)
Q Consensus 2 ~~vLDlG~G~-G~~-~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~v~~~~ 75 (201)
.+|+=+|+|. |.. +..+...|. .|+++|.+++.++.+++ . .+.++.+|..+.. ..-..+|++++..
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~---g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----R---GVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----T---TCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----c---CCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 4688888865 332 223333455 89999999998877764 1 5578889876532 2235688888532
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
. . ......+-...+.+.|+..++.....
T Consensus 80 ~-----------------~-~~~n~~~~~~a~~~~~~~~iiar~~~ 107 (140)
T 3fwz_A 80 P-----------------N-GYEAGEIVASARAKNPDIEIIARAHY 107 (140)
T ss_dssp S-----------------C-HHHHHHHHHHHHHHCSSSEEEEEESS
T ss_pred C-----------------C-hHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 1 1 11122233345666788887765543
No 326
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.23 E-value=0.045 Score=44.11 Aligned_cols=90 Identities=19% Similarity=0.293 Sum_probs=57.7
Q ss_pred CcEEEecCCC-Chhh-HHHH-hc-CCCeEEEEECCHH---HHHHHHHHHhhcCCCceEEEEcccCCCCCC-----CCcee
Q 028957 2 TSVLELGCGN-SRLS-EGLY-ND-GITAITCIDLSAV---AVEKMQERLLLKGYKEVKVLEADMLDLPFS-----NDCFD 69 (201)
Q Consensus 2 ~~vLDlG~G~-G~~~-~~l~-~~-~~~~v~~vD~~~~---~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-----~~~~D 69 (201)
++||-+|+|. |.++ ..++ +. |..+|++++.+++ ..+.+++ .+. ..+ |..+..+. .+.+|
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~----lGa---~~v--~~~~~~~~~i~~~~gg~D 244 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE----LDA---TYV--DSRQTPVEDVPDVYEQMD 244 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH----TTC---EEE--ETTTSCGGGHHHHSCCEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH----cCC---ccc--CCCccCHHHHHHhCCCCC
Confidence 7899999865 7777 7777 65 5535999999887 7777653 232 222 32211100 13689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+|+-...- ...++...+.|+++|+++.....
T Consensus 245 vvid~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 245 FIYEATGF---------------------PKHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp EEEECSCC---------------------HHHHHHHHHHEEEEEEEEECCCC
T ss_pred EEEECCCC---------------------hHHHHHHHHHHhcCCEEEEEeCC
Confidence 98853211 23567788999999998876543
No 327
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=95.16 E-value=0.023 Score=44.95 Aligned_cols=85 Identities=15% Similarity=0.313 Sum_probs=55.1
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
|++||-.|+|. |..+..+++. |. +|++++ +++..+.+++. +.. .++ .|...+ ...+|+|+-...
T Consensus 143 g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l----Ga~--~v~-~d~~~v---~~g~Dvv~d~~g-- 208 (315)
T 3goh_A 143 QREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR----GVR--HLY-REPSQV---TQKYFAIFDAVN-- 208 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH----TEE--EEE-SSGGGC---CSCEEEEECC----
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc----CCC--EEE-cCHHHh---CCCccEEEECCC--
Confidence 57899999965 7777777776 66 999999 88878777653 221 222 242222 467999984211
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
...+....+.|+++|+++...
T Consensus 209 --------------------~~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 209 --------------------SQNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp -------------------------TTGGGEEEEEEEEEEC
T ss_pred --------------------chhHHHHHHHhcCCCEEEEEe
Confidence 012356788999999988774
No 328
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.15 E-value=0.033 Score=43.88 Aligned_cols=61 Identities=18% Similarity=0.285 Sum_probs=41.4
Q ss_pred CceEEEEcccCC-CC-CCCCceeEEEeccccceeeecCCCCCCCCCc----------------cHHHHHHHHHHHhhccc
Q 028957 49 KEVKVLEADMLD-LP-FSNDCFDVVIEKATMEVLFVNSGDPWNPQPE----------------TVTKVMAMLEGVHRVLK 110 (201)
Q Consensus 49 ~~i~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~~~L~ 110 (201)
.++.++++|+.+ +. +++++||+|+++ +||..... ....+..+++++.++|+
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtd-----------PPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk 88 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTS-----------PPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLV 88 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEEC-----------CCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEEC-----------CCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcC
Confidence 467899999876 22 556899999985 44432110 01124567889999999
Q ss_pred CCcEEEEEec
Q 028957 111 PDGLFISVSF 120 (201)
Q Consensus 111 ~gG~l~~~~~ 120 (201)
|||.+++...
T Consensus 89 ~~G~l~i~~~ 98 (297)
T 2zig_A 89 PGGRLVIVVG 98 (297)
T ss_dssp EEEEEEEEEC
T ss_pred CCcEEEEEEC
Confidence 9999887643
No 329
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.14 E-value=0.08 Score=43.28 Aligned_cols=107 Identities=11% Similarity=0.166 Sum_probs=61.8
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC-----C-C-CCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-----L-P-FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-----~-~-~~~~~~D~v 71 (201)
|++||-+|+|. |.++..+++. |...|+++|.+++.++.+++ .+. ..+...-.+ + . .....+|+|
T Consensus 186 g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~----lGa---~~i~~~~~~~~~~~v~~~t~g~g~Dvv 258 (398)
T 1kol_A 186 GSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA----QGF---EIADLSLDTPLHEQIAALLGEPEVDCA 258 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----TTC---EEEETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH----cCC---cEEccCCcchHHHHHHHHhCCCCCCEE
Confidence 57899999876 7788888776 55479999999998888764 232 222211001 0 0 112368999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+-........ ..+ ...+.......++...+.|+++|++++...
T Consensus 259 id~~G~~~~~----~~~--~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 259 VDAVGFEARG----HGH--EGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EECCCTTCBC----SST--TGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred EECCCCcccc----ccc--ccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 8543211000 000 000001123467788899999999887643
No 330
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.09 E-value=0.045 Score=44.52 Aligned_cols=93 Identities=14% Similarity=0.170 Sum_probs=60.2
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcc--cCCC-----CCCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD--MLDL-----PFSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d--~~~~-----~~~~~~~D~v 71 (201)
|++||-+|+|. |.++..+++. |..+|+++|.+++.++.+++ .+.+ .++... -.++ ....+.+|+|
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~vi~~~~~~~~~~~~i~~~~~gg~D~v 267 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK----FGVN--EFVNPKDHDKPIQEVIVDLTDGGVDYS 267 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT----TTCC--EEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----cCCc--EEEccccCchhHHHHHHHhcCCCCCEE
Confidence 57899999875 7777777776 55589999999988887753 2322 122111 0010 1123479999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCC-cEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 120 (201)
+-... ....++...+.|+++ |+++++..
T Consensus 268 id~~g---------------------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 268 FECIG---------------------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp EECSC---------------------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred EECCC---------------------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 85321 134677888999997 99887654
No 331
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.05 E-value=0.079 Score=43.48 Aligned_cols=99 Identities=14% Similarity=0.110 Sum_probs=58.0
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-----C-CCCCceeEEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----P-FSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~-~~~~~~D~v~ 72 (201)
|++||-+|+|. |..+..+++. |..+|+++|.+++.++.+++. +.. .++..+-.++ . .....+|+|+
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~i~~~t~g~g~D~vi 287 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL----GAD--HVIDPTKENFVEAVLDYTNGLGAKLFL 287 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH----TCS--EEECTTTSCHHHHHHHHTTTCCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc----CCC--EEEcCCCCCHHHHHHHHhCCCCCCEEE
Confidence 56899999875 7777777765 555899999999988888653 221 1221110110 0 1233699998
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
-...- .......+++.+.+.++++|+++++...
T Consensus 288 d~~g~----------------~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 288 EATGV----------------PQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp ECSSC----------------HHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred ECCCC----------------cHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 53211 0012233333334555999999887543
No 332
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.81 E-value=0.06 Score=43.03 Aligned_cols=91 Identities=11% Similarity=0.112 Sum_probs=60.1
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC------CCCceeEEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF------SNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------~~~~~D~v~ 72 (201)
|++||-.|+|. |..+..+++. |. +|+++|.+++..+.+++ .+.. .++ |..+..+ ..+.+|+|+
T Consensus 167 g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~--~~i--~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR----LGAE--VAV--NARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS--EEE--ETTTSCHHHHHHHHHSSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH----cCCC--EEE--eCCCcCHHHHHHHhCCCCCEEE
Confidence 56889999976 7888888776 55 99999999998887765 2322 122 2111110 113688887
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.... ....++...+.|+++|+++.....
T Consensus 238 d~~g---------------------~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 238 VTAV---------------------SPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp ESSC---------------------CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred EeCC---------------------CHHHHHHHHHHhccCCEEEEeCCC
Confidence 5321 134677888999999999876543
No 333
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=94.76 E-value=0.3 Score=39.75 Aligned_cols=96 Identities=26% Similarity=0.222 Sum_probs=68.3
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCc--eEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKE--VKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~--i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
.+||.++.+.|.++..++... ++.+.-|--....++.|+..++++. +.+... . .-....+|+|+...
T Consensus 40 ~~~~~~~d~~gal~~~~~~~~---~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~--~~~~~~~~~v~~~l---- 108 (375)
T 4dcm_A 40 GPVLILNDAFGALSCALAEHK---PYSIGDSYISELATRENLRLNGIDESSVKFLDS--T--ADYPQQPGVVLIKV---- 108 (375)
T ss_dssp SCEEEECCSSSHHHHHTGGGC---CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--T--SCCCSSCSEEEEEC----
T ss_pred CCEEEECCCCCHHHHhhccCC---ceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--c--cccccCCCEEEEEc----
Confidence 579999999999998887553 3444446666677888888877543 444322 1 12246789988521
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
|++.......+..+...|++|+.+++..-
T Consensus 109 ------------pk~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 109 ------------PKTLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp ------------CSCHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred ------------CCCHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 24667889999999999999999887654
No 334
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.72 E-value=0.15 Score=40.96 Aligned_cols=92 Identities=20% Similarity=0.185 Sum_probs=58.5
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEccc-CCC----C--CC---CCce
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM-LDL----P--FS---NDCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~-~~~----~--~~---~~~~ 68 (201)
|++||-.|+|. |..+..+++. |. +|+++|.+++..+.+++ .+.+ .++..+- .+. . .. ...+
T Consensus 169 g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~--~~~~~~~~~~~~~~i~~~~~~~~g~g~ 241 (352)
T 1e3j_A 169 GTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN----CGAD--VTLVVDPAKEEESSIIERIRSAIGDLP 241 (352)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH----TTCS--EEEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH----hCCC--EEEcCcccccHHHHHHHHhccccCCCC
Confidence 57899999875 6777777765 55 69999999988887764 2332 2221110 110 0 11 2468
Q ss_pred eEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 69 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
|+|+..... ...++...+.|+++|+++....
T Consensus 242 D~vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 242 NVTIDCSGN---------------------EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SEEEECSCC---------------------HHHHHHHHHHSCTTCEEEECSC
T ss_pred CEEEECCCC---------------------HHHHHHHHHHHhcCCEEEEEec
Confidence 999853211 2356778889999999987654
No 335
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.66 E-value=0.084 Score=42.76 Aligned_cols=93 Identities=14% Similarity=0.138 Sum_probs=59.6
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcc-----cCC-C-CCCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD-----MLD-L-PFSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d-----~~~-~-~~~~~~~D~v 71 (201)
|++||-+|+|. |..+..+++. |..+|+++|.+++..+.+++ .+.+ .++..+ +.. + ....+.+|+|
T Consensus 192 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~vi~~~~~~~~~~~~i~~~t~gg~Dvv 265 (373)
T 1p0f_A 192 GSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE----LGAT--ECLNPKDYDKPIYEVICEKTNGGVDYA 265 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH----TTCS--EEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH----cCCc--EEEecccccchHHHHHHHHhCCCCCEE
Confidence 57899999876 7777777775 55489999999988877764 2322 122111 100 0 0112478999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCC-cEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 120 (201)
+.... ....++...+.|+++ |+++....
T Consensus 266 id~~g---------------------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 266 VECAG---------------------RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp EECSC---------------------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred EECCC---------------------CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 85321 134677888999999 99887654
No 336
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.66 E-value=0.17 Score=40.36 Aligned_cols=94 Identities=18% Similarity=0.213 Sum_probs=58.5
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC------CCCCceeEEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~~D~v~ 72 (201)
|++||-.|+|. |.++..+++. |...++++|.+++.++.+++. +.. .++..+-.+.. .....+|+|+
T Consensus 161 g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l----Ga~--~~i~~~~~~~~~~~~~~~~~~g~d~v~ 234 (346)
T 4a2c_A 161 NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF----GAM--QTFNSSEMSAPQMQSVLRELRFNQLIL 234 (346)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----TCS--EEEETTTSCHHHHHHHHGGGCSSEEEE
T ss_pred CCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc----CCe--EEEeCCCCCHHHHHHhhcccCCccccc
Confidence 56889999876 5666666665 555789999999988877652 322 22211111100 1124578877
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.... ....++...+.|+++|++++....
T Consensus 235 d~~G---------------------~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 235 ETAG---------------------VPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp ECSC---------------------SHHHHHHHHHHCCTTCEEEECCCC
T ss_pred cccc---------------------ccchhhhhhheecCCeEEEEEecc
Confidence 4321 134677788999999998876543
No 337
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.65 E-value=0.2 Score=39.73 Aligned_cols=102 Identities=17% Similarity=0.161 Sum_probs=56.7
Q ss_pred cEEEecCCCChhhHHHHh----cCCC---eEEEEECC------------HHHHHHHHHHHhhcCCC--ceEEEEcccCC-
Q 028957 3 SVLELGCGNSRLSEGLYN----DGIT---AITCIDLS------------AVAVEKMQERLLLKGYK--EVKVLEADMLD- 60 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~----~~~~---~v~~vD~~------------~~~~~~~~~~~~~~~~~--~i~~~~~d~~~- 60 (201)
+|||+|=|+|........ ..+. +++.+|.. .+..+...+......-. .+.+..+|+..
T Consensus 99 ~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~~~ 178 (308)
T 3vyw_A 99 RILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDARKR 178 (308)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHHHH
T ss_pred EEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHHHH
Confidence 699999999986543322 2332 66777742 11112221111111112 34567888865
Q ss_pred CC-CCCCceeEEEeccccceeeecCCCCCCCCCccHHH-HHHHHHHHhhcccCCcEEEE
Q 028957 61 LP-FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-VMAMLEGVHRVLKPDGLFIS 117 (201)
Q Consensus 61 ~~-~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~L~~gG~l~~ 117 (201)
++ +....+|+++. +.. ... .+++- -..+++.+++.++|||++.-
T Consensus 179 l~~l~~~~~Da~fl----DgF-sP~--------kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 179 IKEVENFKADAVFH----DAF-SPY--------KNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp GGGCCSCCEEEEEE----CCS-CTT--------TSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HhhhcccceeEEEe----CCC-Ccc--------cCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 32 44457899884 221 111 11121 26899999999999998763
No 338
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.59 E-value=0.11 Score=42.05 Aligned_cols=93 Identities=13% Similarity=0.173 Sum_probs=59.3
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcc-----cCC-C-CCCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD-----MLD-L-PFSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d-----~~~-~-~~~~~~~D~v 71 (201)
|++||-+|+|. |.++..+++. |..+|+++|.+++..+.+++. +.. .++... +.. + ....+.+|+|
T Consensus 191 g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~~~v~~~~~~g~D~v 264 (373)
T 2fzw_A 191 GSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF----GAT--ECINPQDFSKPIQEVLIEMTDGGVDYS 264 (373)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH----TCS--EEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc----CCc--eEeccccccccHHHHHHHHhCCCCCEE
Confidence 57899999865 6777777765 554899999999888877643 322 122111 100 0 0112368999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCC-cEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 120 (201)
+..... ...++...+.|+++ |+++....
T Consensus 265 id~~g~---------------------~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 265 FECIGN---------------------VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp EECSCC---------------------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred EECCCc---------------------HHHHHHHHHhhccCCcEEEEEec
Confidence 853211 24677888999999 99887654
No 339
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.50 E-value=0.48 Score=36.11 Aligned_cols=116 Identities=9% Similarity=0.117 Sum_probs=66.1
Q ss_pred CCcEEEecCC--CC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CC
Q 028957 1 MTSVLELGCG--NS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 65 (201)
Q Consensus 1 ~~~vLDlG~G--~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 65 (201)
++++|-.|++ .| .++..+++.|. +|++++.+....+.+.+.....+..++.++..|+.+.. + ..
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 4678888876 33 24445556677 89999988766665555544444336889999988642 0 01
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHHH-----------HHHHHHHhhcccCCcEEEEEec
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKV-----------MAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+..|+++.+......- ....+... ...+.. ..+++.+.+.++++|.++.+..
T Consensus 86 g~id~li~~Ag~~~~~-~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 86 GVIHGIAHCIAFANKE-ELVGEYLN--TNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp SCCCEEEECCCCCCGG-GGSSCGGG--CCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CCeeEEEEcccccccc-ccccchhh--ccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 3678888765432100 00000000 011222 2356677778888899887653
No 340
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=94.48 E-value=0.68 Score=35.84 Aligned_cols=74 Identities=14% Similarity=0.160 Sum_probs=50.4
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-C--------C--CCC
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-P--------F--SND 66 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~--------~--~~~ 66 (201)
++||--|++ |.++..+ ++.|. +|++++.+....+.+.+.+...+-.++.++..|+.+. . . ..+
T Consensus 13 k~vlITGas-~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 13 RCAVVTGGN-KGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp CEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred cEEEEecCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 456666655 5454444 44566 8999999998887777776655445789999998774 2 0 014
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 91 ~iD~lv~nAg~ 101 (311)
T 3o26_A 91 KLDILVNNAGV 101 (311)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 68999976554
No 341
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.47 E-value=0.068 Score=42.80 Aligned_cols=94 Identities=13% Similarity=0.244 Sum_probs=61.0
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcc--cCC-C-CC-CCCceeEEEe
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD--MLD-L-PF-SNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d--~~~-~-~~-~~~~~D~v~~ 73 (201)
|++||-.|+|. |..+..+++. +..+|+++|.+++..+.+++ .+.+. ++..+ ..+ + .. ....+|+|+-
T Consensus 172 g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~----lGa~~--~i~~~~~~~~~v~~~t~g~g~d~v~d 245 (345)
T 3jv7_A 172 GSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE----VGADA--AVKSGAGAADAIRELTGGQGATAVFD 245 (345)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH----TTCSE--EEECSTTHHHHHHHHHGGGCEEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----cCCCE--EEcCCCcHHHHHHHHhCCCCCeEEEE
Confidence 56899999876 7777777775 34599999999998887765 23222 22111 100 0 01 1236899885
Q ss_pred ccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
...- ...++...+.|+++|++++....
T Consensus 246 ~~G~---------------------~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 246 FVGA---------------------QSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp SSCC---------------------HHHHHHHHHHEEEEEEEEECSCC
T ss_pred CCCC---------------------HHHHHHHHHHHhcCCEEEEECCC
Confidence 3211 24677888999999999877543
No 342
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=94.36 E-value=0.092 Score=42.44 Aligned_cols=88 Identities=19% Similarity=0.231 Sum_probs=55.5
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCH---HHHHHHHHHHhhcCCCceEEEEcccCCCCCC------CCcee
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSA---VAVEKMQERLLLKGYKEVKVLEADMLDLPFS------NDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~---~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~------~~~~D 69 (201)
|++||-.|+|. |..+..+++. |. +|++++.++ +..+.+++. +. ..+ | .+ .+. .+.+|
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~----ga---~~v--~-~~-~~~~~~~~~~~~~d 248 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEET----KT---NYY--N-SS-NGYDKLKDSVGKFD 248 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHH----TC---EEE--E-CT-TCSHHHHHHHCCEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHh----CC---cee--c-hH-HHHHHHHHhCCCCC
Confidence 46899999854 5555566554 66 999999987 766666542 32 222 2 22 111 14589
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHH-HHHhhcccCCcEEEEEecC
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAML-EGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~L~~gG~l~~~~~~ 121 (201)
+|+..... ...+ +...+.|+++|+++.....
T Consensus 249 ~vid~~g~---------------------~~~~~~~~~~~l~~~G~iv~~g~~ 280 (366)
T 2cdc_A 249 VIIDATGA---------------------DVNILGNVIPLLGRNGVLGLFGFS 280 (366)
T ss_dssp EEEECCCC---------------------CTHHHHHHGGGEEEEEEEEECSCC
T ss_pred EEEECCCC---------------------hHHHHHHHHHHHhcCCEEEEEecC
Confidence 99854221 1245 7788999999998876543
No 343
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=94.28 E-value=0.13 Score=41.16 Aligned_cols=91 Identities=20% Similarity=0.203 Sum_probs=58.4
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--------CCCCceeE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~~D~ 70 (201)
|++||-+|+|. |..+..+++. |..+|++++.+++..+.+++. +.. .++ |..+.. .....+|+
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~----Ga~--~~~--~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKV----GAD--YVI--NPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHH----TCS--EEE--CTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh----CCC--EEE--CCCCcCHHHHHHHHcCCCCCCE
Confidence 57899999964 6667777665 444899999999888777642 221 112 211110 11236899
Q ss_pred EEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
|+..... ...++...+.|+++|+++....
T Consensus 240 vid~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 240 FLEFSGA---------------------PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEECSCC---------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCC---------------------HHHHHHHHHHHhcCCEEEEEcc
Confidence 9853211 2466778889999999887654
No 344
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.15 E-value=0.1 Score=42.31 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=58.9
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEccc--CCC-----CCCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM--LDL-----PFSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~--~~~-----~~~~~~~D~v 71 (201)
|++||-+|+|. |..+..+++. |..+|+++|.+++.++.+++ .+.. .++...- .++ ....+.+|+|
T Consensus 193 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~~~~~~~~~~g~D~v 266 (374)
T 1cdo_A 193 GSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV----FGAT--DFVNPNDHSEPISQVLSKMTNGGVDFS 266 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCC--EEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH----hCCc--eEEeccccchhHHHHHHHHhCCCCCEE
Confidence 57899999865 7777777775 44489999999988887764 2322 1221110 000 0112368999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCC-cEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 120 (201)
+..... ...++...+.|+++ |+++....
T Consensus 267 id~~g~---------------------~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 267 LECVGN---------------------VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp EECSCC---------------------HHHHHHHHHTBCTTTCEEEECSC
T ss_pred EECCCC---------------------HHHHHHHHHHhhcCCcEEEEEcC
Confidence 853211 24677888999999 99887654
No 345
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=94.12 E-value=0.099 Score=42.37 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=59.0
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcc-----cCC-C-CCCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD-----MLD-L-PFSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d-----~~~-~-~~~~~~~D~v 71 (201)
|++||-+|+|. |.++..+++. |..+|+++|.+++..+.+++ .+.. .++..+ +.. + ....+.+|+|
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~vi~~~~~~~~~~~~v~~~~~~g~Dvv 269 (376)
T 1e3i_A 196 GSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA----LGAT--DCLNPRELDKPVQDVITELTAGGVDYS 269 (376)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS--EEECGGGCSSCHHHHHHHHHTSCBSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc--EEEccccccchHHHHHHHHhCCCccEE
Confidence 57899999875 7777777775 54489999999988877754 2322 122111 100 0 0112368999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCC-cEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 120 (201)
+-... ....++...+.|+++ |++++...
T Consensus 270 id~~G---------------------~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 270 LDCAG---------------------TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp EESSC---------------------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred EECCC---------------------CHHHHHHHHHHhhcCCCEEEEECC
Confidence 85321 134677888999999 99887654
No 346
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.04 E-value=0.1 Score=42.08 Aligned_cols=92 Identities=16% Similarity=0.139 Sum_probs=59.4
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-----C-CCCCceeEEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----P-FSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~-~~~~~~D~v~ 72 (201)
|++||-+|+|. |..+..+++. |. +|++++.+++.++.+++. +.. .++..+..++ . .....+|+|+
T Consensus 190 g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~--~vi~~~~~~~~~~v~~~~~g~g~D~vi 262 (363)
T 3uog_A 190 GDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFAL----GAD--HGINRLEEDWVERVYALTGDRGADHIL 262 (363)
T ss_dssp TCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TCS--EEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHc----CCC--EEEcCCcccHHHHHHHHhCCCCceEEE
Confidence 57899999876 7777777775 55 999999999888887653 322 2222111111 0 1223699998
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.... ...++...+.|+++|++++....
T Consensus 263 d~~g----------------------~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 263 EIAG----------------------GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EETT----------------------SSCHHHHHHHEEEEEEEEEECCC
T ss_pred ECCC----------------------hHHHHHHHHHhhcCCEEEEEecC
Confidence 5322 12456677899999999887543
No 347
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.03 E-value=0.016 Score=46.59 Aligned_cols=91 Identities=19% Similarity=0.192 Sum_probs=58.8
Q ss_pred CCcEEEecCCC-ChhhHHHHhc---CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEE----cccC-CCCCCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND---GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE----ADML-DLPFSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~---~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~----~d~~-~~~~~~~~~D~v 71 (201)
|++||-+|+|. |..+..+++. |. +|++++.+++..+.+++. +... ++. .|.. .+. ....+|+|
T Consensus 171 g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~~--vi~~~~~~~~~~~~~-~g~g~D~v 242 (344)
T 2h6e_A 171 EPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL----GADY--VSEMKDAESLINKLT-DGLGASIA 242 (344)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH----TCSE--EECHHHHHHHHHHHH-TTCCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh----CCCE--EeccccchHHHHHhh-cCCCccEE
Confidence 57899999965 6677777665 45 899999999888877652 2221 121 1111 111 12369999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+..... ...++...+.|+++|+++....
T Consensus 243 id~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 243 IDLVGT---------------------EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EESSCC---------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC---------------------hHHHHHHHHHhhcCCEEEEeCC
Confidence 853221 2367778899999999887654
No 348
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.03 E-value=0.097 Score=38.21 Aligned_cols=89 Identities=19% Similarity=0.137 Sum_probs=54.4
Q ss_pred CCcEEEecCC--CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--------CCCCcee
Q 028957 1 MTSVLELGCG--NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~G--~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~~D 69 (201)
|++||..|++ .|..+..++.. |. +|++++.+++..+.+++ .+.. ..+ |..+.. .....+|
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~----~g~~--~~~--d~~~~~~~~~~~~~~~~~~~D 109 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSR----LGVE--YVG--DSRSVDFADEILELTDGYGVD 109 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHT----TCCS--EEE--ETTCSTHHHHHHHHTTTCCEE
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----cCCC--EEe--eCCcHHHHHHHHHHhCCCCCe
Confidence 4689999853 35555555443 66 89999999887766543 2321 111 322211 1123689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++.+.. ...++...+.|+++|+++....
T Consensus 110 ~vi~~~g----------------------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 110 VVLNSLA----------------------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp EEEECCC----------------------THHHHHHHHTEEEEEEEEECSC
T ss_pred EEEECCc----------------------hHHHHHHHHHhccCCEEEEEcC
Confidence 9985321 1356778899999999887643
No 349
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.03 E-value=0.052 Score=43.36 Aligned_cols=61 Identities=25% Similarity=0.384 Sum_probs=42.8
Q ss_pred CceEEEEcccCC-CC-CCCCceeEEEeccccceeeecCCCCCCCCCc----------cHHHHHHHHHHHhhcccCCcEEE
Q 028957 49 KEVKVLEADMLD-LP-FSNDCFDVVIEKATMEVLFVNSGDPWNPQPE----------TVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 49 ~~i~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
....++++|+.. +. ++++++|+|++. +||..... -...+...++++.++|+|||.++
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tD-----------PPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~ 81 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTS-----------PPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFV 81 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEEC-----------CCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEEC-----------CCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEE
Confidence 357889999865 33 567899999973 45543210 11246788999999999999988
Q ss_pred EEec
Q 028957 117 SVSF 120 (201)
Q Consensus 117 ~~~~ 120 (201)
+...
T Consensus 82 i~~~ 85 (323)
T 1boo_A 82 VDFG 85 (323)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7643
No 350
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.02 E-value=0.13 Score=41.54 Aligned_cols=93 Identities=16% Similarity=0.186 Sum_probs=58.7
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcc-----cCC-C-CCCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD-----MLD-L-PFSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d-----~~~-~-~~~~~~~D~v 71 (201)
|++||-+|+|. |..+..+++. |..+|+++|.+++..+.+++ .+.. .++..+ +.. + ....+.+|+|
T Consensus 192 g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~~~~~~~~~~g~D~v 265 (374)
T 2jhf_A 192 GSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE----VGAT--ECVNPQDYKKPIQEVLTEMSNGGVDFS 265 (374)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH----TTCS--EEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----hCCc--eEecccccchhHHHHHHHHhCCCCcEE
Confidence 57899999876 7777777765 54489999999888877754 2322 122111 100 0 0112368999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCC-cEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPD-GLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~ 120 (201)
+..... ...++...+.|+++ |+++....
T Consensus 266 id~~g~---------------------~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 266 FEVIGR---------------------LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp EECSCC---------------------HHHHHHHHHHBCTTTCEEEECSC
T ss_pred EECCCC---------------------HHHHHHHHHHhhcCCcEEEEecc
Confidence 853211 24677788999999 99887653
No 351
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.00 E-value=0.044 Score=43.98 Aligned_cols=91 Identities=15% Similarity=0.277 Sum_probs=56.6
Q ss_pred CCcEEEe-cCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEc--ccCC-C-CCCCCceeEEEe
Q 028957 1 MTSVLEL-GCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA--DMLD-L-PFSNDCFDVVIE 73 (201)
Q Consensus 1 ~~~vLDl-G~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~--d~~~-~-~~~~~~~D~v~~ 73 (201)
|++||-. |+|. |..+..+++. |. +|++++.+++.++.+++. +.+. ++.. |... + ......+|+|+.
T Consensus 151 g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~~--vi~~~~~~~~~~~~~~~~g~Dvv~d 223 (346)
T 3fbg_A 151 GKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKM----GADI--VLNHKESLLNQFKTQGIELVDYVFC 223 (346)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHH----TCSE--EECTTSCHHHHHHHHTCCCEEEEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCcE--EEECCccHHHHHHHhCCCCccEEEE
Confidence 4678888 4544 6677777665 55 999999999888887763 2221 1111 1000 0 012346999885
Q ss_pred ccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
... ....++.+.+.|+++|+++...
T Consensus 224 ~~g---------------------~~~~~~~~~~~l~~~G~iv~~~ 248 (346)
T 3fbg_A 224 TFN---------------------TDMYYDDMIQLVKPRGHIATIV 248 (346)
T ss_dssp SSC---------------------HHHHHHHHHHHEEEEEEEEESS
T ss_pred CCC---------------------chHHHHHHHHHhccCCEEEEEC
Confidence 321 1346677889999999987653
No 352
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.86 E-value=0.19 Score=41.27 Aligned_cols=43 Identities=16% Similarity=0.250 Sum_probs=34.1
Q ss_pred cEEEecCCCChhhHHHHhc---C----CC-eEEEEECCHHHHHHHHHHHhh
Q 028957 3 SVLELGCGNSRLSEGLYND---G----IT-AITCIDLSAVAVEKMQERLLL 45 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~---~----~~-~v~~vD~~~~~~~~~~~~~~~ 45 (201)
.|+|+|+|+|.++..+++. . .. +++.||+|+...+.-++.+..
T Consensus 83 ~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 83 RLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred EEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 5999999999998888653 1 12 899999999988877766644
No 353
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.85 E-value=0.12 Score=41.35 Aligned_cols=89 Identities=15% Similarity=0.191 Sum_probs=57.5
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-------CCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-------FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~~D~v 71 (201)
|++||-.|+|. |..+..+++. |. +|++++.+++.++.+++ .+.. .+ .|..+.. .. +.+|+|
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~--~~--~d~~~~~~~~~~~~~~-~~~d~v 234 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE----LGAD--LV--VNPLKEDAAKFMKEKV-GGVHAA 234 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTCS--EE--ECTTTSCHHHHHHHHH-SSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH----CCCC--EE--ecCCCccHHHHHHHHh-CCCCEE
Confidence 57899999864 6666666654 55 99999999988887754 2322 11 1222111 01 468998
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+..... ...++...+.|+++|+++....
T Consensus 235 id~~g~---------------------~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 235 VVTAVS---------------------KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp EESSCC---------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC---------------------HHHHHHHHHHhhcCCEEEEecc
Confidence 853221 2466778889999999887654
No 354
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.77 E-value=0.11 Score=42.36 Aligned_cols=94 Identities=14% Similarity=0.098 Sum_probs=59.4
Q ss_pred CCcEEEecCCC-ChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcc------cC-CC-C-CCCCcee
Q 028957 1 MTSVLELGCGN-SRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEAD------ML-DL-P-FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d------~~-~~-~-~~~~~~D 69 (201)
|++||-.|+|. |..+..+++... .+|++++.+++.++.+++ .+.. .++..+ +. .+ . .....+|
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~~~~v~~~~~g~g~D 269 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE----IGAD--LTLNRRETSVEERRKAIMDITHGRGAD 269 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHHHHTTTSCEE
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH----cCCc--EEEeccccCcchHHHHHHHHhCCCCCc
Confidence 57899999765 777777777633 499999999988887764 2322 222211 10 01 0 1223699
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+|+..... ...++...+.|+++|+++.....
T Consensus 270 vvid~~g~---------------------~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 270 FILEATGD---------------------SRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp EEEECSSC---------------------TTHHHHHHHHEEEEEEEEECCCC
T ss_pred EEEECCCC---------------------HHHHHHHHHHHhcCCEEEEEecC
Confidence 99853211 13567778899999998876543
No 355
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=93.77 E-value=0.16 Score=40.08 Aligned_cols=90 Identities=13% Similarity=0.245 Sum_probs=57.9
Q ss_pred cEEEecC-C-CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEE-cccCCC-CCCCCceeEEEecccc
Q 028957 3 SVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE-ADMLDL-PFSNDCFDVVIEKATM 77 (201)
Q Consensus 3 ~vLDlG~-G-~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~-~d~~~~-~~~~~~~D~v~~~~~l 77 (201)
+||-.|+ | .|..+..+++. |. +|++++.+++..+.+++. +.+. ++. .+.... ....+.+|+|+-...
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~~--vi~~~~~~~~~~~~~~~~d~v~d~~g- 220 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSL----GANR--ILSRDEFAESRPLEKQLWAGAIDTVG- 220 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHH----TCSE--EEEGGGSSCCCSSCCCCEEEEEESSC-
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCCE--EEecCCHHHHHhhcCCCccEEEECCC-
Confidence 4888887 4 37777777776 55 999999999888888652 3221 121 111111 123357898874211
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
...++...+.|+++|+++.+...
T Consensus 221 ---------------------~~~~~~~~~~l~~~G~iv~~G~~ 243 (324)
T 3nx4_A 221 ---------------------DKVLAKVLAQMNYGGCVAACGLA 243 (324)
T ss_dssp ---------------------HHHHHHHHHTEEEEEEEEECCCT
T ss_pred ---------------------cHHHHHHHHHHhcCCEEEEEecC
Confidence 12778888999999999876543
No 356
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.75 E-value=0.76 Score=31.30 Aligned_cols=62 Identities=18% Similarity=0.247 Sum_probs=41.6
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----CCCCceeEEEe
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIE 73 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~v~~ 73 (201)
++|+-+|+|. ++..++ ..|. +|+++|.+++.++.+.+. .+.++.+|..+.. .....+|+|+.
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~-------~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE-------GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT-------TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC-------CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 4788888854 444443 3466 899999999887766542 4577888876531 22346788886
No 357
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=93.52 E-value=0.45 Score=36.21 Aligned_cols=106 Identities=14% Similarity=0.279 Sum_probs=62.9
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-C---------CCC
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-F---------SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~---------~~~ 66 (201)
|+++|--|++. .++.. +++.|. +|++++.+++.++...+.+. .++.++..|+.+.. . ..+
T Consensus 8 gk~~lVTGas~-gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 8 GKKAIVIGGTH-GMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFG----PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TCEEEEETCSS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHG----GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhC----CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 35677777654 44444 445576 89999999888777666542 36788999987632 0 114
Q ss_pred ceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEe
Q 028957 67 CFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 67 ~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
..|+++.+...... .|... ...++ .-.+.+.+.+.++++|.++.+.
T Consensus 82 ~id~lv~nAg~~~~-----~~~~~--~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 82 AIDLLHINAGVSEL-----EPFDQ--VSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SEEEEEECCCCCCC-----BCGGG--CCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCC-----CChhh--CCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 68998876543211 01000 01122 2234566667777788887664
No 358
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=93.49 E-value=0.93 Score=35.27 Aligned_cols=114 Identities=11% Similarity=0.142 Sum_probs=64.4
Q ss_pred CCcEEEecCCCC-----hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CC
Q 028957 1 MTSVLELGCGNS-----RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 65 (201)
Q Consensus 1 ~~~vLDlG~G~G-----~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 65 (201)
++++|--|+++| .++..+++.|. +|+.++.++...+.+.+.....+ ++.++..|+.+.. + ..
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHhc
Confidence 467888887643 24445556677 89999998765555554444333 6788899987632 0 12
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEec
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+..|+++.+......- ....|+.. ...++ ...+.+.+.+.++++|.++.+..
T Consensus 108 g~iD~lVnnAG~~~~~-~~~~~~~~--~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKD-ELTGRYID--TSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp SCCSEEEECCCCCCHH-HHTSCGGG--CCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCCCEEEECCccCCcc-cccccccc--cCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 4689998765432100 00000000 01122 22455666677778899887653
No 359
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.26 E-value=0.18 Score=40.08 Aligned_cols=91 Identities=18% Similarity=0.199 Sum_probs=56.9
Q ss_pred CCcEEEecC-C-CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-----C-CCCCceeEE
Q 028957 1 MTSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----P-FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~-G-~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~-~~~~~~D~v 71 (201)
|++||-.|+ | .|..+..+++. |. +|++++.+++.++.+++. +.. .++..+-.+. . .....+|+|
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----ga~--~~~~~~~~~~~~~~~~~~~~~g~D~v 221 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEY----GAE--YLINASKEDILRQVLKFTNGKGVDAS 221 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT----TCS--EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCc--EEEeCCCchHHHHHHHHhCCCCceEE
Confidence 568899984 3 36666666665 55 999999999888776542 321 2222111111 0 123469999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+....- ..++...+.|+++|+++....
T Consensus 222 id~~g~----------------------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 222 FDSVGK----------------------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EECCGG----------------------GGHHHHHHHEEEEEEEEECCC
T ss_pred EECCCh----------------------HHHHHHHHHhccCCEEEEEcC
Confidence 853221 356677889999999887654
No 360
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.21 E-value=0.03 Score=45.53 Aligned_cols=90 Identities=20% Similarity=0.285 Sum_probs=57.6
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEc---ccCCCCCCCCceeEEEecc
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA---DMLDLPFSNDCFDVVIEKA 75 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~---d~~~~~~~~~~~D~v~~~~ 75 (201)
|++||-+|+|. |..+..+++. |. +|++++.+++.++.+++. +.. .++.. |... ... +.+|+|+...
T Consensus 195 g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~l----Ga~--~vi~~~~~~~~~-~~~-~g~Dvvid~~ 265 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKAL----GAD--EVVNSRNADEMA-AHL-KSFDFILNTV 265 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TCS--EEEETTCHHHHH-TTT-TCEEEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCc--EEeccccHHHHH-Hhh-cCCCEEEECC
Confidence 57899999875 7777777765 55 799999999888877652 322 12211 1100 111 4689998532
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.- ...++...+.|+++|+++....
T Consensus 266 g~---------------------~~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 266 AA---------------------PHNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp SS---------------------CCCHHHHHTTEEEEEEEEECCC
T ss_pred CC---------------------HHHHHHHHHHhccCCEEEEecc
Confidence 21 1135567789999999887643
No 361
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=93.16 E-value=0.12 Score=47.45 Aligned_cols=51 Identities=24% Similarity=0.300 Sum_probs=41.6
Q ss_pred cEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEccc
Q 028957 3 SVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM 58 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~ 58 (201)
++|||.||.|+++.-+.++|. ..+.++|+++.+.+..+.|+. ...++..|+
T Consensus 542 ~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI 593 (1002)
T 3swr_A 542 RTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP-----GSTVFTEDC 593 (1002)
T ss_dssp EEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT-----TSEEECSCH
T ss_pred eEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC-----CCccccccH
Confidence 689999999999999988887 578999999999888877753 345555554
No 362
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.11 E-value=0.18 Score=39.89 Aligned_cols=92 Identities=14% Similarity=0.088 Sum_probs=57.7
Q ss_pred CCcEEEec-CCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-----C-CCCCceeEE
Q 028957 1 MTSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----P-FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG-~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~-~~~~~~D~v 71 (201)
|++||-.| +|. |..+..+++. |. +|++++.+++.++.+++. +.. .++..+-.+. . .....+|+|
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----Ga~--~~~~~~~~~~~~~~~~~~~~~g~Dvv 213 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKAL----GAW--ETIDYSHEDVAKRVLELTDGKKCPVV 213 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TCS--EEEETTTSCHHHHHHHHTTTCCEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCC--EEEeCCCccHHHHHHHHhCCCCceEE
Confidence 56888888 333 6677666665 66 899999999888877653 221 1221111110 0 123469999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+....- ..+....+.|+++|+++.....
T Consensus 214 id~~g~----------------------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 214 YDGVGQ----------------------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp EESSCG----------------------GGHHHHHTTEEEEEEEEECCCT
T ss_pred EECCCh----------------------HHHHHHHHHhcCCCEEEEEecC
Confidence 853221 2556778899999999887543
No 363
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.07 E-value=0.69 Score=33.11 Aligned_cols=64 Identities=20% Similarity=0.254 Sum_probs=39.4
Q ss_pred CcEEEecCCC-Chh-hHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC----CC-CCCceeEEEe
Q 028957 2 TSVLELGCGN-SRL-SEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL----PF-SNDCFDVVIE 73 (201)
Q Consensus 2 ~~vLDlG~G~-G~~-~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~----~~-~~~~~D~v~~ 73 (201)
++|+-+|+|. |.. +..+... +. .|+++|.+++.++.+++ . .+.++.+|..+. .. ....+|+|+.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~----~---g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRS----E---GRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHH----T---TCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHH----C---CCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 5788888764 322 2333344 55 89999999987766543 2 345666776542 11 2346898886
No 364
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=93.06 E-value=0.14 Score=40.87 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=56.7
Q ss_pred CCcEEEecCCC-ChhhHHHHh-cCCCeEEEEECCHHHHHHHHHHHhhcCCCc-eEEEEcccCC-C-C-CCCCceeEEEec
Q 028957 1 MTSVLELGCGN-SRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKE-VKVLEADMLD-L-P-FSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~-~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~-i~~~~~d~~~-~-~-~~~~~~D~v~~~ 74 (201)
|++||-+|+|+ |.++..+++ .+..+|+++|.+++.++.+++. +... +.....|..+ + . .....+|.++..
T Consensus 164 g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~----Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~ 239 (348)
T 4eez_A 164 GDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI----GADVTINSGDVNPVDEIKKITGGLGVQSAIVC 239 (348)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT----TCSEEEEC-CCCHHHHHHHHTTSSCEEEEEEC
T ss_pred CCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc----CCeEEEeCCCCCHHHHhhhhcCCCCceEEEEe
Confidence 57899999987 445555554 3444999999999887776643 2211 1111122111 0 0 122346666642
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.. -...+....+.|+++|++++....
T Consensus 240 ~~---------------------~~~~~~~~~~~l~~~G~~v~~g~~ 265 (348)
T 4eez_A 240 AV---------------------ARIAFEQAVASLKPMGKMVAVAVP 265 (348)
T ss_dssp CS---------------------CHHHHHHHHHTEEEEEEEEECCCC
T ss_pred cc---------------------CcchhheeheeecCCceEEEEecc
Confidence 11 135677788999999998876543
No 365
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.95 E-value=0.32 Score=38.52 Aligned_cols=89 Identities=13% Similarity=0.121 Sum_probs=55.7
Q ss_pred CCcEEEecC--CCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC-CC-------CCCCcee
Q 028957 1 MTSVLELGC--GNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LP-------FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~--G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~-------~~~~~~D 69 (201)
|++||-.|| |.|..+..++.. |. +|+++|.+++.++.+++ + +.. .. .|..+ .. ...+.+|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~-~---g~~--~~--~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQ-I---GFD--AA--FNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH-T---TCS--EE--EETTSCSCHHHHHHHHCTTCEE
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh-c---CCc--EE--EecCCHHHHHHHHHHHhCCCCe
Confidence 568999997 335555555554 66 89999999888777733 2 221 11 23322 11 1124689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++.+.. ...++...+.|+++|++++...
T Consensus 217 ~vi~~~g----------------------~~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 217 CYFDNVG----------------------GEFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp EEEESSC----------------------HHHHHHHHTTEEEEEEEEECCC
T ss_pred EEEECCC----------------------hHHHHHHHHHHhcCCEEEEEec
Confidence 9886422 1246778899999999887653
No 366
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.93 E-value=1.3 Score=33.98 Aligned_cols=111 Identities=19% Similarity=0.229 Sum_probs=64.1
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECC------------HHHHHHHHHHHhhcCCCceEEEEcccCCCC---
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLS------------AVAVEKMQERLLLKGYKEVKVLEADMLDLP--- 62 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~------------~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--- 62 (201)
|+++|--|++.| .++..+++.|. +|+.+|.+ .+.++.+...+...+ .++.++..|+.+..
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~ 87 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-RKAYTAEVDVRDRAAVS 87 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT-SCEEEEECCTTCHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcC-CceEEEEccCCCHHHHH
Confidence 356777776544 23334445576 89999987 666666665555444 47888999987632
Q ss_pred --C-----CCCceeEEEeccccceeeecCCCCCCCCCccHHH--------HHHHHHHHhhcccCCcEEEEEe
Q 028957 63 --F-----SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTK--------VMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 63 --~-----~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
+ ..+..|+++.+...... . .. ...+..+. ...+++.+.+.++.+|.++.+.
T Consensus 88 ~~~~~~~~~~g~id~lv~nAg~~~~----~-~~-~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 88 RELANAVAEFGKLDVVVANAGICPL----G-AH-LPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCC----C-TT-CCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHcCCCCEEEECCCcCcc----c-Cc-CCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 0 01368999876554211 0 00 11111111 2344566777778888887654
No 367
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=92.83 E-value=0.67 Score=35.65 Aligned_cols=75 Identities=21% Similarity=0.260 Sum_probs=50.8
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----------CCCCc
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSNDC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~~ 67 (201)
|+++|--|++.| ..+..+++.|. +|+.+|.+++.++.+.+.+...+ .++..++.|+.+.. -..+.
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKG-YDAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT-CCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 355565565544 23344445577 89999999998888877776665 36788888987631 12367
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 87 iDiLVNNAG~ 96 (255)
T 4g81_D 87 VDILINNAGI 96 (255)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 8999987654
No 368
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.80 E-value=0.25 Score=39.22 Aligned_cols=90 Identities=13% Similarity=0.117 Sum_probs=57.2
Q ss_pred CCcEEEecCC--CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-------CCCCceeE
Q 028957 1 MTSVLELGCG--NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-------FSNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G--~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~~D~ 70 (201)
|++||-.|++ .|..+..+++. |. +|++++.+++..+.+.+. .+.. .++ |..+.. ...+.+|+
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~---~g~~--~~~--~~~~~~~~~~~~~~~~~~~d~ 221 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEE---LGFD--GAI--DYKNEDLAAGLKRECPKGIDV 221 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT---TCCS--EEE--ETTTSCHHHHHHHHCTTCEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHH---cCCC--EEE--ECCCHHHHHHHHHhcCCCceE
Confidence 5789999983 36666666655 55 999999999877776332 2321 112 221111 11346899
Q ss_pred EEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++.+.. ...++...+.|+++|++++...
T Consensus 222 vi~~~g----------------------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 222 FFDNVG----------------------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp EEESSC----------------------HHHHHHHHTTEEEEEEEEECCC
T ss_pred EEECCC----------------------cchHHHHHHHHhhCCEEEEEee
Confidence 885321 1367788899999999887643
No 369
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.78 E-value=0.2 Score=39.90 Aligned_cols=92 Identities=16% Similarity=0.210 Sum_probs=56.5
Q ss_pred CCcEEEecCCC--ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-----C-CCCCceeEE
Q 028957 1 MTSVLELGCGN--SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----P-FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~--G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~-~~~~~~D~v 71 (201)
|++||-.|+|+ |..+..+++. |. +|++++.+++.++.+++. +.. .++...-.+. . .....+|+|
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----ga~--~~~~~~~~~~~~~~~~~~~~~g~Dvv 217 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL----GAA--YVIDTSTAPLYETVMELTNGIGADAA 217 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHH----TCS--EEEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhC----CCc--EEEeCCcccHHHHHHHHhCCCCCcEE
Confidence 57899999874 6677777665 66 999999998888777653 221 1221111110 0 123479999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
+....- . ......+.|+++|+++.+...
T Consensus 218 id~~g~------------------~----~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 218 IDSIGG------------------P----DGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp EESSCH------------------H----HHHHHHHTEEEEEEEEECCCT
T ss_pred EECCCC------------------h----hHHHHHHHhcCCCEEEEEeec
Confidence 863221 1 123344789999999877543
No 370
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.64 E-value=0.22 Score=39.80 Aligned_cols=90 Identities=20% Similarity=0.270 Sum_probs=56.4
Q ss_pred CCcEEEecC-C-CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-----C-CCCCceeEE
Q 028957 1 MTSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----P-FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~-G-~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~-~~~~~~D~v 71 (201)
|++||-.|+ | .|..+..+++. |. +|++++.+++..+.+++. +.. .++..+ .+. . .....+|+|
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----ga~--~v~~~~-~~~~~~v~~~~~~~g~Dvv 231 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSV----GAD--IVLPLE-EGWAKAVREATGGAGVDMV 231 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHH----TCS--EEEESS-TTHHHHHHHHTTTSCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCc--EEecCc-hhHHHHHHHHhCCCCceEE
Confidence 578999997 3 37777777665 55 999999998888777653 322 222222 111 0 123369999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+....- ..++...+.|+++|++++...
T Consensus 232 id~~g~----------------------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 232 VDPIGG----------------------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EESCC------------------------CHHHHHHTEEEEEEEEEC--
T ss_pred EECCch----------------------hHHHHHHHhhcCCCEEEEEEc
Confidence 853221 245677889999999987653
No 371
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.56 E-value=0.4 Score=37.34 Aligned_cols=107 Identities=10% Similarity=0.078 Sum_probs=64.6
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----------CCCCc
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSNDC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~~ 67 (201)
|+.+|--|++.| ..+..+++.|. +|+.+|.+++.++.+.+.+. .+...++.|+.+.. -..+.
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIG----GGAVGIQADSANLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcC----CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 355666676555 23444455577 89999999988877765542 25677888987632 11257
Q ss_pred eeEEEeccccceeeecCCCCCCCCCccHHHH-----------HHHHHHHhhcccCCcEEEEEe
Q 028957 68 FDVVIEKATMEVLFVNSGDPWNPQPETVTKV-----------MAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 68 ~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~~~~ 119 (201)
.|+++.+...... .|..+ -..++. -.+.+.+.+.|+.+|.++.+.
T Consensus 104 iDiLVNNAG~~~~-----~~~~~--~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 104 IDVLFVNAGGGSM-----LPLGE--VTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp EEEEEECCCCCCC-----CCTTS--CCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCEEEECCCCCCC-----CChhh--ccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 8999877654221 12211 112222 234556667788888877654
No 372
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.55 E-value=0.62 Score=38.46 Aligned_cols=91 Identities=15% Similarity=0.170 Sum_probs=58.1
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----CCCCceeEEEe
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIE 73 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~v~~ 73 (201)
.+|+=+|+|. ++..++ ..+. .|+++|.+++.++.+++. .+.++.+|+.+.. ..-...|+|++
T Consensus 5 ~~viIiG~Gr--~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~-------g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 5 MRVIIAGFGR--FGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF-------GMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT-------TCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CeEEEECCCH--HHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC-------CCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 4688888764 444443 3355 899999999998887642 4567889987632 22356788876
Q ss_pred ccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
... .......+-...+.+.|+..++....
T Consensus 75 ~~~------------------~~~~n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 75 AID------------------DPQTNLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp CCS------------------SHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCC------------------ChHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 321 12333444555666778878776544
No 373
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.55 E-value=0.19 Score=40.19 Aligned_cols=90 Identities=18% Similarity=0.136 Sum_probs=56.6
Q ss_pred CCcEEEecCC--CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC-CC-------CCCCcee
Q 028957 1 MTSVLELGCG--NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LP-------FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~G--~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~-------~~~~~~D 69 (201)
|++||-.|++ .|..+..++.. |. +|++++.+++..+.+++ .+.. .++ |..+ .. ...+.+|
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~----~g~~--~~~--d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRS----IGGE--VFI--DFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHH----TTCC--EEE--ETTTCSCHHHHHHHHHTSCEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHH----cCCc--eEE--ecCccHhHHHHHHHHhCCCCC
Confidence 5789999983 46666666554 65 89999998877766653 2321 112 3321 01 0112689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++.+... ...++...+.|+++|+++....
T Consensus 241 ~vi~~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 241 GVINVSVS---------------------EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEECSSC---------------------HHHHHHHTTSEEEEEEEEECCC
T ss_pred EEEECCCc---------------------HHHHHHHHHHHhcCCEEEEEeC
Confidence 98864221 2467888899999999887654
No 374
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.34 E-value=1.7 Score=33.15 Aligned_cols=62 Identities=13% Similarity=0.067 Sum_probs=44.4
Q ss_pred CcEEEecCCCChhhHHHHhc----CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecc
Q 028957 2 TSVLELGCGNSRLSEGLYND----GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKA 75 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~----~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~ 75 (201)
++||-.|| |.++..+++. |. +|++++.++........ .+++++.+|+.++. ...+|+|+...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC--CTTCCEEEECC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhh-------CCCeEEEecccccc--cCCCCEEEECC
Confidence 57899995 7777766553 55 89999998765443332 26899999998865 45689988643
No 375
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.33 E-value=0.22 Score=39.74 Aligned_cols=89 Identities=16% Similarity=0.181 Sum_probs=56.5
Q ss_pred CCcEEEecC-C-CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-C-------CCCCcee
Q 028957 1 MTSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-P-------FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~-G-~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-------~~~~~~D 69 (201)
|++||-.|+ | .|..+..+++. |. +|++++.+++.++.+++.+ +.. ..+ |..+. . ...+.+|
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~---g~~--~~~--d~~~~~~~~~~~~~~~~~~~d 227 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKF---GFD--DAF--NYKEESDLTAALKRCFPNGID 227 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTS---CCS--EEE--ETTSCSCSHHHHHHHCTTCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CCc--eEE--ecCCHHHHHHHHHHHhCCCCc
Confidence 578999997 3 36666666654 65 8999999988777765322 321 112 22211 0 1124689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
+++.+.. ...++...+.|+++|++++..
T Consensus 228 ~vi~~~g----------------------~~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 228 IYFENVG----------------------GKMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEESSC----------------------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEEECCC----------------------HHHHHHHHHHHhcCCEEEEEc
Confidence 9885321 136778889999999988764
No 376
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.24 E-value=0.26 Score=39.35 Aligned_cols=90 Identities=20% Similarity=0.313 Sum_probs=57.1
Q ss_pred CCcEEEecCCC--ChhhHHHHhc--CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-------CCC-Cce
Q 028957 1 MTSVLELGCGN--SRLSEGLYND--GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-------FSN-DCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~--G~~~~~l~~~--~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------~~~-~~~ 68 (201)
|++||-.|+|+ |..+..+++. |. +|+++|.+++..+.+++. +.. .++ |..+.. ... +.+
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~----g~~--~~~--~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA----GAD--YVI--NASMQDPLAEIRRITESKGV 241 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH----TCS--EEE--ETTTSCHHHHHHHHTTTSCE
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh----CCC--EEe--cCCCccHHHHHHHHhcCCCc
Confidence 57899999874 5555555544 55 899999999888777542 221 112 211111 111 478
Q ss_pred eEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 69 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
|+++....- ...++...+.|+++|+++....
T Consensus 242 d~vi~~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 242 DAVIDLNNS---------------------EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEEEESCCC---------------------HHHHTTGGGGEEEEEEEEECCS
T ss_pred eEEEECCCC---------------------HHHHHHHHHHHhcCCEEEEECC
Confidence 998854221 2467778899999999887654
No 377
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.21 E-value=0.18 Score=40.16 Aligned_cols=59 Identities=24% Similarity=0.309 Sum_probs=41.1
Q ss_pred eEEE-EcccCCC--CCCCCceeEEEeccccceeeecCCCCCCCC-------CccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 51 VKVL-EADMLDL--PFSNDCFDVVIEKATMEVLFVNSGDPWNPQ-------PETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 51 i~~~-~~d~~~~--~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..++ ++|+... .++.+++|+|++ ++||... ..-.......+.++.++|+|+|.+++...
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~t-----------DPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIIC-----------DPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEE-----------CCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEE-----------CCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 5677 9998652 255678999997 4555432 11123467888899999999999887643
No 378
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=92.20 E-value=0.12 Score=41.39 Aligned_cols=90 Identities=17% Similarity=0.159 Sum_probs=56.6
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-------CCCCceeEE
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-------FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~~D~v 71 (201)
|++||-+|+|. |..+..+++. |..+|++++.+++.++.+++. . . .++ |..+.. .....+|+|
T Consensus 165 g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a----~--~v~--~~~~~~~~~~~~~~~~~g~D~v 235 (343)
T 2dq4_A 165 GKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-A----D--RLV--NPLEEDLLEVVRRVTGSGVEVL 235 (343)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-C----S--EEE--CTTTSCHHHHHHHHHSSCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-H----H--hcc--CcCccCHHHHHHHhcCCCCCEE
Confidence 57899999864 6677777765 443899999998877666432 1 1 111 211100 012468999
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+....- ...++...+.|+++|+++....
T Consensus 236 id~~g~---------------------~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 236 LEFSGN---------------------EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EECSCC---------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EECCCC---------------------HHHHHHHHHHHhcCCEEEEEec
Confidence 853211 2456778889999999887654
No 379
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=92.07 E-value=0.28 Score=40.77 Aligned_cols=44 Identities=30% Similarity=0.510 Sum_probs=35.4
Q ss_pred CcEEEecCCCChhhHHHHhc----C--CCeEEEEECCHHHHHHHHHHHhh
Q 028957 2 TSVLELGCGNSRLSEGLYND----G--ITAITCIDLSAVAVEKMQERLLL 45 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~----~--~~~v~~vD~~~~~~~~~~~~~~~ 45 (201)
-+|+|+|+|+|.+...+++. + ..+++.||+|+...+.-++++..
T Consensus 139 ~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 139 RRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 47999999999998888653 2 23899999999888877777654
No 380
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.05 E-value=0.12 Score=39.70 Aligned_cols=57 Identities=16% Similarity=0.264 Sum_probs=38.4
Q ss_pred eEEEEcccCCC--CCCCCceeEEEeccccceeeecCCCCCCCCCc------cH----HHHHHHHHHHhhcccCCcEEEEE
Q 028957 51 VKVLEADMLDL--PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPE------TV----TKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 51 i~~~~~d~~~~--~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~------~~----~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
..++++|+... .++.+++|+|++ ++||..... .. ......++++.++|+|+|.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~-----------DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVI-----------DPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEE-----------CCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEE-----------CCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 35677887542 244678999996 466654311 11 23567888889999999998876
No 381
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=91.95 E-value=0.65 Score=38.64 Aligned_cols=40 Identities=20% Similarity=0.226 Sum_probs=30.7
Q ss_pred CCcEEEecC-CC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHH
Q 028957 1 MTSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQE 41 (201)
Q Consensus 1 ~~~vLDlG~-G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~ 41 (201)
|++||-+|+ |. |.++..+++. |. ++++++.+++.++.+++
T Consensus 229 g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 229 GDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRA 271 (456)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHh
Confidence 568899987 43 7777777776 55 89999989988887765
No 382
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=91.71 E-value=1.4 Score=33.65 Aligned_cols=110 Identities=17% Similarity=0.211 Sum_probs=62.3
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEEC-CHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CC
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDL-SAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 65 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~-~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 65 (201)
++++|--|++. .++.. +++.|. +|+.++. +.+..+...+.+...+ .++.++..|+.+.. + ..
T Consensus 18 ~k~~lVTGas~-gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 18 GKVALVTGSGR-GIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TCEEEESCTTS-HHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35667666554 44444 445576 7888775 4555666655555544 36888999987632 0 11
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEec
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+..|+++.+...... .|... ...++ .-.+.+.+.+.++++|.++.+..
T Consensus 95 g~id~lvnnAg~~~~-----~~~~~--~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 95 GHLDIAVSNSGVVSF-----GHLKD--VTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp SCCCEEECCCCCCCC-----CCGGG--CCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCCCEEEECCCCCCC-----CCccc--CCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 367998866543211 01000 01122 22445667777888899887654
No 383
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=91.60 E-value=1.8 Score=29.93 Aligned_cols=94 Identities=15% Similarity=0.091 Sum_probs=55.2
Q ss_pred CcEEEecCCCChhhHHHHh----cCCCeEEEEECC-HHHHHHHHHHHhhcCCCceEEEEcccCCCC----CCCCceeEEE
Q 028957 2 TSVLELGCGNSRLSEGLYN----DGITAITCIDLS-AVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVI 72 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~----~~~~~v~~vD~~-~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~v~ 72 (201)
.+|+=+|+ |..+..+++ .+. .|+++|.+ ++..+...+... ..+.++.+|..+.. ..-...|+|+
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLG----DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHC----TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhc----CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 46777776 455554443 355 89999997 555554443322 24688899976521 1234678888
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+... .......+....+.+.|...++....
T Consensus 77 ~~~~------------------~d~~n~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 77 ALSD------------------NDADNAFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp ECSS------------------CHHHHHHHHHHHHHHTSSSCEEEECS
T ss_pred EecC------------------ChHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 6321 12334455556666667777776543
No 384
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.30 E-value=1.3 Score=33.63 Aligned_cols=115 Identities=17% Similarity=0.196 Sum_probs=62.7
Q ss_pred CCcEEEecCC-CChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CC
Q 028957 1 MTSVLELGCG-NSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 65 (201)
Q Consensus 1 ~~~vLDlG~G-~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 65 (201)
+++||-.|++ +|.++..+ ++.|. +|++++.+....+.+++.....+ ++.++..|+.+.. + ..
T Consensus 14 ~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 14 GKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG--SELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC--CcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4678888875 24444444 45576 89999988655554444433332 5788899987632 0 12
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEec
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+..|+++.+......-......+. ....++ ...+++.+.+.++++|.++.+..
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 154 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLD--GLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSY 154 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTT--TCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CCCCEEEECCccCccccccCcccc--ccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEec
Confidence 468999976554211000001110 001122 22345666677777888776653
No 385
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=91.13 E-value=0.23 Score=44.36 Aligned_cols=53 Identities=17% Similarity=0.253 Sum_probs=41.8
Q ss_pred CcEEEecCCCChhhHHHHhcC------CCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccC
Q 028957 2 TSVLELGCGNSRLSEGLYNDG------ITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADML 59 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~------~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~ 59 (201)
.+||||.||.|+++.-+.+.| +..+.++|+++.+++.-+.|.. ...+.+.|+.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp-----~~~~~~~di~ 271 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP-----QTEVRNEKAD 271 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT-----TSEEEESCHH
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC-----CCceecCcHH
Confidence 379999999999998887765 4478999999999988887753 4456666653
No 386
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.10 E-value=0.5 Score=37.61 Aligned_cols=89 Identities=16% Similarity=0.144 Sum_probs=57.1
Q ss_pred CCcEEEecC--CCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--------CCCCcee
Q 028957 1 MTSVLELGC--GNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~--G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~~D 69 (201)
|++||-.|+ |.|..+..+++. |. +|++++.+++.++.+++. +... ++ |..+.. .....+|
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----ga~~--~~--d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKAL----GADE--TV--NYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCSE--EE--ETTSTTHHHHHHHHTTTTCEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhc----CCCE--EE--cCCcccHHHHHHHHhCCCCce
Confidence 468999998 346666666664 55 899999999888877642 2221 22 222111 1124689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++.... ...++.+.+.|+++|+++....
T Consensus 238 ~vi~~~g----------------------~~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 238 KVVDHTG----------------------ALYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp EEEESSC----------------------SSSHHHHHHHEEEEEEEEESSC
T ss_pred EEEECCC----------------------HHHHHHHHHhhccCCEEEEEec
Confidence 9986432 1245667788999999887654
No 387
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.05 E-value=0.38 Score=42.28 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=60.1
Q ss_pred cEEEecCCCChhhHHHHhcC------------CC-eEEEEEC---CHHHHHHHHHH-----------HhhcC--------
Q 028957 3 SVLELGCGNSRLSEGLYNDG------------IT-AITCIDL---SAVAVEKMQER-----------LLLKG-------- 47 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~~------------~~-~v~~vD~---~~~~~~~~~~~-----------~~~~~-------- 47 (201)
+|+|+|-|+|.....+.+.. .. +++.+|. +.+.+..+... +..+.
T Consensus 61 ~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r 140 (689)
T 3pvc_A 61 IFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCHR 140 (689)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEEE
T ss_pred EEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCceE
Confidence 79999999998777665431 11 7999998 55555543221 11111
Q ss_pred ------CCceEEEEcccCC-CC-CC---CCceeEEEeccccceeeecCCCCCCCCCccHHH-HHHHHHHHhhcccCCcEE
Q 028957 48 ------YKEVKVLEADMLD-LP-FS---NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-VMAMLEGVHRVLKPDGLF 115 (201)
Q Consensus 48 ------~~~i~~~~~d~~~-~~-~~---~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~L~~gG~l 115 (201)
.-.+.+..+|+.. ++ +. ...+|+++..... .+-+| +. ...++..+.++++|||++
T Consensus 141 ~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~-----p~~np--------~~w~~~~~~~l~~~~~~g~~~ 207 (689)
T 3pvc_A 141 ILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFA-----PAKNP--------DMWNEQLFNAMARMTRPGGTF 207 (689)
T ss_dssp EEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSC-----C--CC--------TTCSHHHHHHHHHHEEEEEEE
T ss_pred EEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCC-----CCCCh--------hhhhHHHHHHHHHHhCCCCEE
Confidence 0135567778764 22 21 3578888853211 00000 11 257889999999999986
Q ss_pred EE
Q 028957 116 IS 117 (201)
Q Consensus 116 ~~ 117 (201)
..
T Consensus 208 ~t 209 (689)
T 3pvc_A 208 ST 209 (689)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 388
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=90.95 E-value=1.2 Score=33.73 Aligned_cols=76 Identities=16% Similarity=0.228 Sum_probs=51.9
Q ss_pred CCcEEEecC-CCC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGC-GNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~-G~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|-.|+ |.| .++..+++.|. +|++++.+.+.++...+.+...+..++.++..|+.+.. + ..+
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 456777776 454 24445556677 89999999988887777775554457899999987632 0 013
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 101 ~id~li~~Ag~ 111 (266)
T 3o38_A 101 RLDVLVNNAGL 111 (266)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 67999876553
No 389
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.94 E-value=0.033 Score=44.94 Aligned_cols=92 Identities=23% Similarity=0.267 Sum_probs=55.0
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEc-ccCCC-CCCCCceeEEEeccc
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA-DMLDL-PFSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~-~~~~~~~D~v~~~~~ 76 (201)
|++||-+|+|. |..+..+++. |. +|++++.+++..+.+++. .+...+ +.. +...+ .. .+.+|+|+....
T Consensus 181 g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~---lGa~~v--i~~~~~~~~~~~-~~g~D~vid~~g 253 (357)
T 2cf5_A 181 GLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQD---LGADDY--VIGSDQAKMSEL-ADSLDYVIDTVP 253 (357)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTT---SCCSCE--EETTCHHHHHHS-TTTEEEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHH---cCCcee--eccccHHHHHHh-cCCCCEEEECCC
Confidence 56899999865 6666666665 66 899999988776666522 232221 111 10001 11 136899985322
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
-. ..++...+.|+++|+++....
T Consensus 254 ~~---------------------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 254 VH---------------------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp SC---------------------CCSHHHHTTEEEEEEEEECSC
T ss_pred Ch---------------------HHHHHHHHHhccCCEEEEeCC
Confidence 10 124556788999999887643
No 390
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=90.92 E-value=0.49 Score=37.73 Aligned_cols=88 Identities=16% Similarity=0.179 Sum_probs=55.1
Q ss_pred CCcEEEecC-CC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC------CCCCceeEE
Q 028957 1 MTSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDCFDVV 71 (201)
Q Consensus 1 ~~~vLDlG~-G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~~D~v 71 (201)
|++||-.|+ |. |..+..+++. |. +|+++ .+++.++.+++. +.. .+. +-.+.. .....+|+|
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~l----Ga~---~i~-~~~~~~~~~~~~~~~~g~D~v 220 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDL----GAT---PID-ASREPEDYAAEHTAGQGFDLV 220 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHH----TSE---EEE-TTSCHHHHHHHHHTTSCEEEE
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHc----CCC---Eec-cCCCHHHHHHHHhcCCCceEE
Confidence 578999994 43 7777777765 55 89999 788877766542 322 122 111110 123468998
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+.... ...+....+.|+++|+++.+..
T Consensus 221 id~~g----------------------~~~~~~~~~~l~~~G~iv~~g~ 247 (343)
T 3gaz_A 221 YDTLG----------------------GPVLDASFSAVKRFGHVVSCLG 247 (343)
T ss_dssp EESSC----------------------THHHHHHHHHEEEEEEEEESCC
T ss_pred EECCC----------------------cHHHHHHHHHHhcCCeEEEEcc
Confidence 85321 1356777889999999887643
No 391
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.90 E-value=0.77 Score=34.94 Aligned_cols=111 Identities=9% Similarity=0.097 Sum_probs=61.8
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEE-ECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCI-DLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~v-D~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++.| .++..+++.|. +|+.+ +.+.+..+...+.+...+ .++.++..|+.+.. + ..+
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLG-RSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTT-SCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 456777776554 23344445577 77777 666666666665555444 36788999987632 0 013
Q ss_pred ceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEe
Q 028957 67 CFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 67 ~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
..|+++.+...... ..|... ...++ .-.+.+.+.+.++++|.++.+.
T Consensus 86 ~id~lv~nAg~~~~----~~~~~~--~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 86 EIHGLVHVAGGLIA----RKTIAE--MDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp SEEEEEECCCCCCC----CCCTTT--CCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCccCC----CCChhh--CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 68998876542111 011111 01122 2344556667777788877654
No 392
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.87 E-value=0.057 Score=43.72 Aligned_cols=92 Identities=20% Similarity=0.220 Sum_probs=54.1
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEc-ccCCC-CCCCCceeEEEeccc
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA-DMLDL-PFSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~-~~~~~~~D~v~~~~~ 76 (201)
|++||-+|+|. |..+..+++. |. +|++++.+++..+.+.+. .+.. .++.. +...+ .. .+.+|+|+....
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~---lGa~--~v~~~~~~~~~~~~-~~~~D~vid~~g 260 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKN---FGAD--SFLVSRDQEQMQAA-AGTLDGIIDTVS 260 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHT---SCCS--EEEETTCHHHHHHT-TTCEEEEEECCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh---cCCc--eEEeccCHHHHHHh-hCCCCEEEECCC
Confidence 46888999765 6666666655 55 899999988777666532 2322 12211 10001 11 136899985422
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.. ..++...+.|+++|+++....
T Consensus 261 ~~---------------------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 261 AV---------------------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp SC---------------------CCSHHHHHHEEEEEEEEECCC
T ss_pred cH---------------------HHHHHHHHHHhcCCEEEEEcc
Confidence 11 123456678899999887654
No 393
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=90.83 E-value=1.5 Score=34.04 Aligned_cols=114 Identities=11% Similarity=0.173 Sum_probs=63.5
Q ss_pred CCcEEEecCCC-Ch----hhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CC
Q 028957 1 MTSVLELGCGN-SR----LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 65 (201)
Q Consensus 1 ~~~vLDlG~G~-G~----~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 65 (201)
++++|-.|+++ .. ++..+++.|. +|++++.++...+.+.+.....+ .+.++..|+.+.. + ..
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46788888754 23 4444555677 89999998765555554444333 4678889987632 1 01
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEec
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+..|+++.+......- ....|... ...++ ...+.+.+.+.++.+|.++.+..
T Consensus 107 g~iD~lVnnAG~~~~~-~~~~~~~~--~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 107 GSLDFVVHAVAFSDKN-ELKGRYVD--TSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp SCCSEEEECCCCCCHH-HHTSCGGG--CCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CCCCEEEECCCcCCcc-cccCChhh--CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 4689998765432100 00000000 01122 23445666777778899887653
No 394
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=90.83 E-value=1.1 Score=35.71 Aligned_cols=97 Identities=13% Similarity=0.189 Sum_probs=61.9
Q ss_pred CcEEEecCCC-C-hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc-------C-C----------CceEEEEcccCCC
Q 028957 2 TSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK-------G-Y----------KEVKVLEADMLDL 61 (201)
Q Consensus 2 ~~vLDlG~G~-G-~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~-------~-~----------~~i~~~~~d~~~~ 61 (201)
.+|--+|+|+ | .++..++..|. .|+..|++++.++.+.+++... + . .++.+ ..|+.+.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~l~~i~~-~~~l~~a 84 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISS-CTNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEE-ECCHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCCccCHHHHHhhccc-ccchHhH
Confidence 4688899987 3 45566677787 8999999999888776654321 1 0 01222 1222110
Q ss_pred CCCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 62 PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 62 ~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
-...|+|+-. + +++.+-.+++++++-++++|+..+.-.+
T Consensus 85 ---~~~ad~ViEa-----v-----------~E~l~iK~~lf~~l~~~~~~~aIlaSNT 123 (319)
T 3ado_A 85 ---VEGVVHIQEC-----V-----------PENLDLKRKIFAQLDSIVDDRVVLSSSS 123 (319)
T ss_dssp ---TTTEEEEEEC-----C-----------CSCHHHHHHHHHHHHTTCCSSSEEEECC
T ss_pred ---hccCcEEeec-----c-----------ccHHHHHHHHHHHHHHHhhhcceeehhh
Confidence 1345777742 1 1566778899999999999987765444
No 395
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=90.81 E-value=2 Score=32.88 Aligned_cols=111 Identities=16% Similarity=0.219 Sum_probs=62.3
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECC-HHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLS-AVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~-~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++.| .++..+++.|. +|+.++.+ .+..+...+.+...+ .++.++..|+.+.. + ..+
T Consensus 31 gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 31 GKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAG-GRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 356777776544 23344455576 78888654 455665555555444 36788999987632 0 113
Q ss_pred ceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEec
Q 028957 67 CFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 67 ~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..|+++.+...... .|... ...++ ...+++.+.+.++++|.++.+..
T Consensus 109 ~iD~lvnnAg~~~~-----~~~~~--~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 109 GLDILVNSAGIWHS-----APLEE--TTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp CCCEEEECCCCCCC-----CCGGG--CCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCcEEEECCCCCCC-----CChhh--CCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 68998876543211 11100 01122 22456666777888898887643
No 396
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=90.70 E-value=1.1 Score=34.29 Aligned_cols=75 Identities=19% Similarity=0.236 Sum_probs=52.4
Q ss_pred CCcEEEecCCCCh---hhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----------CCCCc
Q 028957 1 MTSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSNDC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G~---~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~~ 67 (201)
|+.+|--|++.|- .+..+++.|. +|+.+|.+++.++.+.+.+...+ .++.+++.|+.+.. -.-+.
T Consensus 7 gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g-~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 84 (254)
T 4fn4_A 7 NKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMG-KEVLGVKADVSKKKDVEEFVRRTFETYSR 84 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4566666765552 3344455677 89999999999988888777665 37888999987632 11257
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 85 iDiLVNNAGi 94 (254)
T 4fn4_A 85 IDVLCNNAGI 94 (254)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8999977653
No 397
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.64 E-value=0.92 Score=35.69 Aligned_cols=89 Identities=20% Similarity=0.155 Sum_probs=52.2
Q ss_pred CCcEEEec-CCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCC-CCCCCCceeEEEeccc
Q 028957 1 MTSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLD-LPFSNDCFDVVIEKAT 76 (201)
Q Consensus 1 ~~~vLDlG-~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~D~v~~~~~ 76 (201)
|++||-.| +|. |..+..+++. |. +|++++ +++..+.+++ .+.+. ++..+-.+ ..-....+|+|+....
T Consensus 153 g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~----lGa~~--~i~~~~~~~~~~~~~g~D~v~d~~g 224 (321)
T 3tqh_A 153 GDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKA----LGAEQ--CINYHEEDFLLAISTPVDAVIDLVG 224 (321)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHH----HTCSE--EEETTTSCHHHHCCSCEEEEEESSC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHH----cCCCE--EEeCCCcchhhhhccCCCEEEECCC
Confidence 56888886 554 7777777776 55 888887 4544555543 33322 22211111 1111146899885321
Q ss_pred cceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 77 MEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 77 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
...+....+.|+++|+++...
T Consensus 225 ----------------------~~~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 225 ----------------------GDVGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp ----------------------HHHHHHHGGGEEEEEEEEECC
T ss_pred ----------------------cHHHHHHHHhccCCCEEEEeC
Confidence 112377889999999988764
No 398
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.39 E-value=1.7 Score=32.03 Aligned_cols=90 Identities=13% Similarity=0.068 Sum_probs=54.2
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----CCCCceeEEEe
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIE 73 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~v~~ 73 (201)
++|+=+|+| .++..++ +.+. .|+++|.+++.++...+.. .+.++.+|+.+.. ..-..+|+|++
T Consensus 1 M~iiIiG~G--~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~------~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 1 MKVIIIGGE--TTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKL------KATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CCEEEECCH--HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHS------SSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHc------CCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 367777765 4444443 3455 8999999998877654331 4578889987631 12346788886
Q ss_pred ccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEE
Q 028957 74 KATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISV 118 (201)
Q Consensus 74 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~ 118 (201)
... .......+....+.+.+...++..
T Consensus 72 ~~~------------------~d~~n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 72 LTP------------------RDEVNLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp CCS------------------CHHHHHHHHHHHHHTSCCCEEEEC
T ss_pred ecC------------------CcHHHHHHHHHHHHHcCCCeEEEE
Confidence 321 122334455555555666666654
No 399
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.30 E-value=2.3 Score=32.90 Aligned_cols=110 Identities=13% Similarity=0.180 Sum_probs=61.1
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEECCHH-HHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CC
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDLSAV-AVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 65 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~-~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 65 (201)
|+++|--|++. .++.. +++.|. +|+.++.+.. ..+...+.....+ .++.++..|+.+.. + ..
T Consensus 47 gk~vlVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 47 GKNVLITGGDS-GIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTT-CCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35677777654 44444 445576 8999998754 3444444444433 37888999987632 0 11
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEe
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
+..|+++.+...... ..+... ...++ ...+++.+.+.++.+|.++.+.
T Consensus 124 g~iD~lvnnAg~~~~----~~~~~~--~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 124 GSLNILVNNVAQQYP----QQGLEY--ITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SSCCEEEECCCCCCC----CSSGGG--CCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCC----CCCccc--CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 367998876433110 000000 01122 2345666777788889887664
No 400
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.16 E-value=0.68 Score=37.09 Aligned_cols=89 Identities=18% Similarity=0.172 Sum_probs=55.2
Q ss_pred CCcEEEecCC--CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--------CCCCcee
Q 028957 1 MTSVLELGCG--NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~G--~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~~D 69 (201)
|++||-.|++ .|..+..+++. |. +|++++.+++..+.+++ .+.. .++ |..+.. .....+|
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~--~~~--d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQ----NGAH--EVF--NHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS--EEE--ETTSTTHHHHHHHHHCTTCEE
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH----cCCC--EEE--eCCCchHHHHHHHHcCCCCcE
Confidence 4688999972 35566556554 55 89999999887776543 2321 112 222111 1123689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++.+.. ...+....+.|+++|+++....
T Consensus 242 ~vi~~~G----------------------~~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 242 IIIEMLA----------------------NVNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp EEEESCH----------------------HHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCC----------------------hHHHHHHHHhccCCCEEEEEec
Confidence 9985321 1246677899999999887653
No 401
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=90.09 E-value=0.59 Score=37.41 Aligned_cols=89 Identities=19% Similarity=0.168 Sum_probs=55.8
Q ss_pred CCcEEEecC-C-CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-------CCCCceeE
Q 028957 1 MTSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-------FSNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~-G-~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~~D~ 70 (201)
|++||-.|+ | .|..+..+++. |. +|++++.+++.++.+++. +.. .++ |..+.. .....+|+
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l----Ga~--~~~--~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL----GAK--RGI--NYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS--EEE--ETTTSCHHHHHHHHHSSCEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc----CCC--EEE--eCCchHHHHHHHHHhCCCceE
Confidence 467888853 3 36666666665 55 899999999988877653 221 122 211111 11346899
Q ss_pred EEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 71 VIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 71 v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
++....- ..++...+.|+++|+++....
T Consensus 239 vid~~g~----------------------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 239 ILDMIGA----------------------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEESCCG----------------------GGHHHHHHTEEEEEEEEECCC
T ss_pred EEECCCH----------------------HHHHHHHHHhccCCEEEEEEe
Confidence 9864221 145667889999999887654
No 402
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.03 E-value=0.77 Score=36.91 Aligned_cols=91 Identities=18% Similarity=0.162 Sum_probs=57.1
Q ss_pred CCcEEEec-CC-CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-----CCCCCceeEEE
Q 028957 1 MTSVLELG-CG-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----PFSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG-~G-~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~~D~v~ 72 (201)
|++||-.| +| .|..+..+++. |. +|++++.+++.++.+++ .+.. .++..+-.++ ......+|+|+
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~~~~~~~~g~D~vi 236 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS----LGCD--RPINYKTEPVGTVLKQEYPEGVDVVY 236 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH----cCCc--EEEecCChhHHHHHHHhcCCCCCEEE
Confidence 56889999 34 47777777765 55 89999999888877764 2322 1221111110 01124689988
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.... ...++.+.+.|+++|+++....
T Consensus 237 d~~g----------------------~~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 237 ESVG----------------------GAMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp ECSC----------------------THHHHHHHHHEEEEEEEEECCC
T ss_pred ECCC----------------------HHHHHHHHHHHhcCCEEEEEeC
Confidence 5321 1366778899999999887643
No 403
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=89.57 E-value=3.6 Score=31.77 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=37.6
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEE-CCHHHHHHHHHHHh-hcCCCceEEEEcccCCC
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCID-LSAVAVEKMQERLL-LKGYKEVKVLEADMLDL 61 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD-~~~~~~~~~~~~~~-~~~~~~i~~~~~d~~~~ 61 (201)
+++|--|+ +|.++..++ +.|. +|++++ .+++.++.+.+.+. ..+ .++.++..|+.+.
T Consensus 10 k~~lVTGa-s~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 10 PVALVTGA-AKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNV 72 (291)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSS
T ss_pred CEEEEECC-CchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcC-CeeEEEEeecCCc
Confidence 45665555 455555544 4566 899999 88887776666554 223 3688899998764
No 404
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=89.25 E-value=1.6 Score=36.13 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=29.9
Q ss_pred CCcEEEecC-CC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHH
Q 028957 1 MTSVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQE 41 (201)
Q Consensus 1 ~~~vLDlG~-G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~ 41 (201)
|++||-.|+ |. |..+..+++. |. ++++++.+++.++.+++
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 578998987 43 6677777665 54 89999999888877754
No 405
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=89.23 E-value=1.7 Score=33.70 Aligned_cols=111 Identities=14% Similarity=0.129 Sum_probs=61.8
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECC--HHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----C
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLS--AVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----S 64 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~--~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~ 64 (201)
++++|--|++ |.++..+ ++.|. +|+.++.+ ....+...+.....+ .++.++..|+.+.. + .
T Consensus 49 ~k~vlVTGas-~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 49 DRKALVTGGD-SGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECG-RKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTT-CCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcC-CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3567777755 4444444 44576 88888876 344555554444443 36788888887632 0 0
Q ss_pred CCceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEec
Q 028957 65 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 65 ~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.+..|+++.+....... .+... ...++ ...+++.+.+.++++|.++.+..
T Consensus 126 ~g~iD~lv~nAg~~~~~----~~~~~--~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAI----PEIKD--LTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCCCC----SSGGG--CCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCCC----CCccc--CCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 14689988765432110 00000 01122 23456667778888899887643
No 406
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.12 E-value=0.71 Score=32.16 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=37.6
Q ss_pred CCcEEEecCCC-Chhh-HHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----CCCCceeEEEec
Q 028957 1 MTSVLELGCGN-SRLS-EGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~-~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~v~~~ 74 (201)
+++|+-+|+|. |... ..+...+. +|+++|.+++.++.+++ . ....++.+|..+.. .....+|+|+..
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~---~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~ 91 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---E---FSGFTVVGDAAEFETLKECGMEKADMVFAF 91 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---T---CCSEEEESCTTSHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---c---CCCcEEEecCCCHHHHHHcCcccCCEEEEE
Confidence 36788888765 3322 22333465 89999998865543321 1 13456666654311 112468988863
No 407
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=89.07 E-value=0.86 Score=35.95 Aligned_cols=89 Identities=18% Similarity=0.272 Sum_probs=55.5
Q ss_pred cEEEecC-CC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEc-cc--CCC-CCCCCceeEEEecc
Q 028957 3 SVLELGC-GN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEA-DM--LDL-PFSNDCFDVVIEKA 75 (201)
Q Consensus 3 ~vLDlG~-G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~-d~--~~~-~~~~~~~D~v~~~~ 75 (201)
+||-.|+ |. |..+..+++. |. +|++++.+++.++.+++. +... ++.. +. ... ......+|+|+...
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~l----Ga~~--v~~~~~~~~~~~~~~~~~~~d~vid~~ 225 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQL----GASE--VISREDVYDGTLKALSKQQWQGAVDPV 225 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHH----TCSE--EEEHHHHCSSCCCSSCCCCEEEEEESC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCcE--EEECCCchHHHHHHhhcCCccEEEECC
Confidence 7899997 43 6677777665 66 799999987777777542 3222 1211 11 111 12234689988532
Q ss_pred ccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 76 TMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 76 ~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
. . ..+....+.|+++|+++....
T Consensus 226 g--------------------~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 226 G--------------------G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp C--------------------T--HHHHHHHTTEEEEEEEEECCC
T ss_pred c--------------------H--HHHHHHHHhhcCCCEEEEEec
Confidence 1 1 257778899999999887654
No 408
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=88.92 E-value=0.75 Score=36.25 Aligned_cols=89 Identities=15% Similarity=0.090 Sum_probs=55.5
Q ss_pred CCcEEEecC--CCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--------CCCCcee
Q 028957 1 MTSVLELGC--GNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~--G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~~D 69 (201)
|++||-.|+ |.|..+..++.. |. +|++++.+++..+.+++. +.. ..+ |..+.. .....+|
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~----g~~--~~~--~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKA----GAW--QVI--NYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHH----TCS--EEE--ETTTSCHHHHHHHHTTTCCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CCC--EEE--ECCCccHHHHHHHHhCCCCce
Confidence 467888884 335555555554 66 899999998888777652 221 112 222111 1123689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++.+.. ...++.+.+.|+++|+++....
T Consensus 212 ~vi~~~g----------------------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 212 VVYDSVG----------------------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEECSC----------------------GGGHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCc----------------------hHHHHHHHHHhcCCCEEEEEec
Confidence 9986432 1356777889999999887654
No 409
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=88.89 E-value=0.95 Score=36.20 Aligned_cols=89 Identities=12% Similarity=0.035 Sum_probs=54.4
Q ss_pred CCcEEEecC--CCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--------CCCCcee
Q 028957 1 MTSVLELGC--GNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~--G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~~D 69 (201)
|++||-.|+ |.|..+..++.. |. +|++++.+++.++.+++. +.. ..+ |..+.. .....+|
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~----g~~--~~~--~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKL----GAA--AGF--NYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH----TCS--EEE--ETTTSCHHHHHHHHTTTSCEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHc----CCc--EEE--ecCChHHHHHHHHHhcCCCce
Confidence 467888884 235555555554 55 899999999888777432 221 112 221111 1224689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++....- ..++...+.|+++|+++....
T Consensus 234 ~vi~~~G~----------------------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 234 LILDCIGG----------------------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEESSCG----------------------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEEECCCc----------------------hHHHHHHHhccCCCEEEEEec
Confidence 99864321 135666788999999887654
No 410
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=88.79 E-value=4.7 Score=31.09 Aligned_cols=92 Identities=16% Similarity=0.270 Sum_probs=53.6
Q ss_pred CcEEEecCCC-C-hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEE--------cccCCC-CCCC--Cce
Q 028957 2 TSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLE--------ADMLDL-PFSN--DCF 68 (201)
Q Consensus 2 ~~vLDlG~G~-G-~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~--------~d~~~~-~~~~--~~~ 68 (201)
++|.=+|+|. | .++..+++.|. +|+++|.+++.++.+.+. + +.... .++.+. .... ...
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~----g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKN----G---LIADFNGEEVVANLPIFSPEEIDHQNEQV 75 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHH----C---EEEEETTEEEEECCCEECGGGCCTTSCCC
T ss_pred CeEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhC----C---EEEEeCCCeeEecceeecchhhcccCCCC
Confidence 4688888875 2 33444555566 899999998877766543 1 11111 000010 1111 257
Q ss_pred eEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 69 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
|+|+..- .......+++.+...++++..++...
T Consensus 76 d~vi~~v------------------~~~~~~~v~~~l~~~l~~~~~iv~~~ 108 (316)
T 2ew2_A 76 DLIIALT------------------KAQQLDAMFKAIQPMITEKTYVLCLL 108 (316)
T ss_dssp SEEEECS------------------CHHHHHHHHHHHGGGCCTTCEEEECC
T ss_pred CEEEEEe------------------ccccHHHHHHHHHHhcCCCCEEEEec
Confidence 9888632 12356778888888888877665443
No 411
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.76 E-value=1.7 Score=33.09 Aligned_cols=75 Identities=20% Similarity=0.196 Sum_probs=49.9
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++ |.++..+ ++.|. +|+.++.+++.++.+.+.+...+..++.++..|+.+.. + ..+
T Consensus 10 ~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 10 GRSVVVTGGT-KGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 3556666654 5454444 44576 89999999988887777766554347889999987632 0 113
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 88 ~id~lvnnAg~ 98 (262)
T 3pk0_A 88 GIDVVCANAGV 98 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999876543
No 412
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.76 E-value=2.5 Score=32.03 Aligned_cols=74 Identities=19% Similarity=0.236 Sum_probs=50.8
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
++++|--|++.| .++..+++.|. +|+.++.+++.++.+.+.+...+ .++.++..|+.+.. + ..+.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTG-RRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 356777777655 23444555677 89999999988888777766554 37888999987632 0 1246
Q ss_pred eeEEEeccc
Q 028957 68 FDVVIEKAT 76 (201)
Q Consensus 68 ~D~v~~~~~ 76 (201)
.|+++.+..
T Consensus 89 id~lv~nAg 97 (264)
T 3ucx_A 89 VDVVINNAF 97 (264)
T ss_dssp CSEEEECCC
T ss_pred CcEEEECCC
Confidence 899887653
No 413
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=88.76 E-value=1.6 Score=33.39 Aligned_cols=111 Identities=19% Similarity=0.227 Sum_probs=61.1
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEE-CCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCID-LSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD-~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++.| .++..+++.|. +|+.++ .+.+..+...+.+...+ .++.++..|+.+.. + ..+
T Consensus 27 ~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 104 (267)
T 3u5t_A 27 NKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAG-GKALTAQADVSDPAAVRRLFATAEEAFG 104 (267)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356676666544 23334445577 777764 45556666555555444 36788899987632 0 114
Q ss_pred ceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEec
Q 028957 67 CFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 67 ~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..|+++.+...... .|... ...++ ...+++.+.+.++++|.++.+..
T Consensus 105 ~iD~lvnnAG~~~~-----~~~~~--~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 105 GVDVLVNNAGIMPL-----TTIAE--TGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp CEEEEEECCCCCCC-----CCGGG--CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCEEEECCCCCCC-----CChhh--CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 68999876554211 11100 01111 22345566677777888887653
No 414
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=88.72 E-value=0.6 Score=40.88 Aligned_cols=102 Identities=11% Similarity=0.121 Sum_probs=60.2
Q ss_pred cEEEecCCCChhhHHHHhc------------CCC-eEEEEEC---CHHHHHHHHHH-----------HhhcC--C-----
Q 028957 3 SVLELGCGNSRLSEGLYND------------GIT-AITCIDL---SAVAVEKMQER-----------LLLKG--Y----- 48 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~------------~~~-~v~~vD~---~~~~~~~~~~~-----------~~~~~--~----- 48 (201)
+|+|+|-|+|.......+. ... +++++|. +.+.+..+... ...+. +
T Consensus 69 ~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 148 (676)
T 3ps9_A 69 VVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHR 148 (676)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEEE
T ss_pred EEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCceE
Confidence 7999999999876665443 112 7999998 77777644331 11111 1
Q ss_pred -------CceEEEEcccCC-CC-CC---CCceeEEEeccccceeeecCCCCCCCCCccHHH-HHHHHHHHhhcccCCcEE
Q 028957 49 -------KEVKVLEADMLD-LP-FS---NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-VMAMLEGVHRVLKPDGLF 115 (201)
Q Consensus 49 -------~~i~~~~~d~~~-~~-~~---~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~L~~gG~l 115 (201)
-.+.+..+|+.+ ++ +. ...+|+++..... .. .+.+. ...++..+.+.++|||++
T Consensus 149 ~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~-----p~--------~np~~w~~~~~~~l~~~~~~g~~~ 215 (676)
T 3ps9_A 149 LLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFA-----PA--------KNPDMWTQNLFNAMARLARPGGTL 215 (676)
T ss_dssp EEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSC-----GG--------GCGGGSCHHHHHHHHHHEEEEEEE
T ss_pred EEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCC-----Cc--------CChhhhhHHHHHHHHHHhCCCCEE
Confidence 123456666654 11 11 3568888843211 00 11111 367899999999999997
Q ss_pred EE
Q 028957 116 IS 117 (201)
Q Consensus 116 ~~ 117 (201)
..
T Consensus 216 ~t 217 (676)
T 3ps9_A 216 AT 217 (676)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 415
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.59 E-value=3.9 Score=27.19 Aligned_cols=64 Identities=20% Similarity=0.278 Sum_probs=38.6
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----CCCCceeEEEe
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIE 73 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~v~~ 73 (201)
++|+=+|+| .++..++ +.+. +|+++|.+++.++.+.+.. .+.++.+|..+.. .....+|+|+.
T Consensus 5 m~i~IiG~G--~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 5 MYIIIAGIG--RVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEI------DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHC------SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhc------CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 567888775 4444443 3455 8999999988766554321 3456667654321 11246798886
Q ss_pred c
Q 028957 74 K 74 (201)
Q Consensus 74 ~ 74 (201)
.
T Consensus 76 ~ 76 (140)
T 1lss_A 76 V 76 (140)
T ss_dssp C
T ss_pred e
Confidence 3
No 416
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=88.33 E-value=1.2 Score=35.23 Aligned_cols=89 Identities=15% Similarity=0.157 Sum_probs=55.6
Q ss_pred CCcEEEecC--CCChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--------CCCCcee
Q 028957 1 MTSVLELGC--GNSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------FSNDCFD 69 (201)
Q Consensus 1 ~~~vLDlG~--G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~~~~~~D 69 (201)
|++||-.|+ |.|..+..++.. |. +|++++.+++.++.+++. +.. ..+ |..+.. .....+|
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~----g~~--~~~--d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKL----GCH--HTI--NYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH----TCS--EEE--ETTTSCHHHHHHHHHTTCCEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHc----CCC--EEE--ECCCHHHHHHHHHHhCCCCCe
Confidence 467888885 346666655554 65 999999998887777542 221 112 222111 1123689
Q ss_pred EEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 70 VVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 70 ~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+++.+..- ..++...+.|+++|+++....
T Consensus 217 ~vi~~~g~----------------------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 217 VVYDSIGK----------------------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEEECSCT----------------------TTHHHHHHTEEEEEEEEECCC
T ss_pred EEEECCcH----------------------HHHHHHHHhhccCCEEEEEec
Confidence 98854221 346777889999999887654
No 417
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=88.25 E-value=1.4 Score=35.30 Aligned_cols=91 Identities=11% Similarity=0.105 Sum_probs=48.4
Q ss_pred CCcEEEecC-C-CChhhHHHHhc-CCCeEEEEECCHH---HHHHHHHHHhhcCCCceEEEEc------ccCCCCCCCCce
Q 028957 1 MTSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAV---AVEKMQERLLLKGYKEVKVLEA------DMLDLPFSNDCF 68 (201)
Q Consensus 1 ~~~vLDlG~-G-~G~~~~~l~~~-~~~~v~~vD~~~~---~~~~~~~~~~~~~~~~i~~~~~------d~~~~~~~~~~~ 68 (201)
|++||-.|+ | .|.++..+++. |...+..++.++. ..+.++ ..+... ++.. ++....-..+.+
T Consensus 168 g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~----~lGa~~--vi~~~~~~~~~~~~~~~~~~~~ 241 (357)
T 1zsy_A 168 GDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK----SLGAEH--VITEEELRRPEMKNFFKDMPQP 241 (357)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH----HTTCSE--EEEHHHHHSGGGGGTTSSSCCC
T ss_pred CCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH----hcCCcE--EEecCcchHHHHHHHHhCCCCc
Confidence 578999997 4 37777788775 6534445554432 233333 334322 2221 111111111148
Q ss_pred eEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 69 DVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 69 D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
|+|+-... .. ......+.|+++|+++...
T Consensus 242 Dvvid~~g------------------~~----~~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 242 RLALNCVG------------------GK----SSTELLRQLARGGTMVTYG 270 (357)
T ss_dssp SEEEESSC------------------HH----HHHHHHTTSCTTCEEEECC
T ss_pred eEEEECCC------------------cH----HHHHHHHhhCCCCEEEEEe
Confidence 99885321 11 1235678999999988763
No 418
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=88.22 E-value=2.1 Score=32.12 Aligned_cols=75 Identities=20% Similarity=0.312 Sum_probs=49.6
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
++++|-.|++.| .++..+++.|. +|++++.+++..+.+.+.+...+ .++.++..|+.+.. + ..+.
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 356777776543 23444445576 89999999988887777765544 36788999987632 0 0136
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 87 id~li~~Ag~ 96 (253)
T 3qiv_A 87 IDYLVNNAAI 96 (253)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999876543
No 419
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=88.10 E-value=1.5 Score=35.31 Aligned_cols=90 Identities=12% Similarity=0.199 Sum_probs=53.7
Q ss_pred CCcEEEecCC--CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCC-----CCCCCceeEEE
Q 028957 1 MTSVLELGCG--NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDL-----PFSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G--~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~~~~~~~D~v~ 72 (201)
|++||-.|++ .|..+..+++. |. +|+++. +++..+.+++ .+.. .++...-.++ ....+.+|+|+
T Consensus 165 g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~----lGa~--~vi~~~~~~~~~~v~~~t~g~~d~v~ 236 (371)
T 3gqv_A 165 PVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKS----RGAE--EVFDYRAPNLAQTIRTYTKNNLRYAL 236 (371)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHH----TTCS--EEEETTSTTHHHHHHHHTTTCCCEEE
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHH----cCCc--EEEECCCchHHHHHHHHccCCccEEE
Confidence 4678999983 47788888776 55 788885 7776666653 3322 2222111110 11224589998
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcc-cCCcEEEEEe
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVL-KPDGLFISVS 119 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L-~~gG~l~~~~ 119 (201)
-...- ...++...+.| +++|+++.+.
T Consensus 237 d~~g~---------------------~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 237 DCITN---------------------VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp ESSCS---------------------HHHHHHHHHHSCTTCEEEEESS
T ss_pred ECCCc---------------------hHHHHHHHHHhhcCCCEEEEEe
Confidence 53211 24566677788 6999988764
No 420
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=88.02 E-value=1.2 Score=35.53 Aligned_cols=90 Identities=10% Similarity=0.097 Sum_probs=55.5
Q ss_pred CcEEEecCC--CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-------CCCCceeEE
Q 028957 2 TSVLELGCG--NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-------FSNDCFDVV 71 (201)
Q Consensus 2 ~~vLDlG~G--~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-------~~~~~~D~v 71 (201)
++||-.|++ .|..+..++.. |..+|++++.+++..+.+++.+ +.. ..+ |..+.. ...+.+|++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~---g~~--~~~--d~~~~~~~~~~~~~~~~~~d~v 234 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSEL---GFD--AAI--NYKKDNVAEQLRESCPAGVDVY 234 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTS---CCS--EEE--ETTTSCHHHHHHHHCTTCEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc---CCc--eEE--ecCchHHHHHHHHhcCCCCCEE
Confidence 788999873 35566666554 5448999999987777665422 321 112 222111 111268998
Q ss_pred EeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 72 IEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 72 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
+.+.. ...++...+.|+++|+++++..
T Consensus 235 i~~~G----------------------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 235 FDNVG----------------------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp EESCC----------------------HHHHHHHHHTEEEEEEEEECCC
T ss_pred EECCC----------------------HHHHHHHHHHhccCcEEEEECC
Confidence 85321 1467788899999999887643
No 421
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.93 E-value=0.21 Score=39.56 Aligned_cols=91 Identities=16% Similarity=0.217 Sum_probs=53.9
Q ss_pred cEEEecC-C-CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCce-EEEEcccCCC-CCCCCceeEEEecccc
Q 028957 3 SVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEV-KVLEADMLDL-PFSNDCFDVVIEKATM 77 (201)
Q Consensus 3 ~vLDlG~-G-~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i-~~~~~d~~~~-~~~~~~~D~v~~~~~l 77 (201)
+||-.|+ | .|..+..+++. |. +|++++.+++.++.+++ .+...+ .....+.... ....+.+|+|+....-
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~d~vid~~g~ 226 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRV----LGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGG 226 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHH----TTCSEEEECC---------CCSCCEEEEEECSTT
T ss_pred eEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH----cCCcEEEecCCcHHHHHHHhcCCcccEEEECCcH
Confidence 7899997 3 37777777765 55 89999998877777754 232221 1111110001 1223468988853210
Q ss_pred ceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 78 EVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..++...+.|+++|++++...
T Consensus 227 ----------------------~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 227 ----------------------RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp ----------------------TTHHHHHHTEEEEEEEEECSC
T ss_pred ----------------------HHHHHHHHhhccCCEEEEEee
Confidence 245677889999999887643
No 422
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=87.87 E-value=2.3 Score=33.11 Aligned_cols=75 Identities=17% Similarity=0.162 Sum_probs=50.5
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
|++||-.|++.| .++..+++.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. + ..+.
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQG-FDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 356777776644 23344445576 89999999998888877776554 37888999987632 0 0136
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 109 id~lvnnAg~ 118 (301)
T 3tjr_A 109 VDVVFSNAGI 118 (301)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8998876543
No 423
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=87.83 E-value=6.4 Score=32.79 Aligned_cols=94 Identities=14% Similarity=0.285 Sum_probs=56.5
Q ss_pred CcEEEecCCC-C-hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhh-------cC------C--CceEEEEcccCCCCCC
Q 028957 2 TSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLL-------KG------Y--KEVKVLEADMLDLPFS 64 (201)
Q Consensus 2 ~~vLDlG~G~-G-~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~-------~~------~--~~i~~~~~d~~~~~~~ 64 (201)
++|.-+|+|. | .++..++..|. .|+++|.+++.++.+.+.... .+ . ....+ ..|...
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~-~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~---- 111 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKE---- 111 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGG----
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHH----
Confidence 3578889886 3 35555566676 899999999888776653211 00 0 01222 444322
Q ss_pred CCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEE
Q 028957 65 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 117 (201)
Q Consensus 65 ~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 117 (201)
-...|+|+..-. +...-...+++++...++++..++.
T Consensus 112 ~~~aDlVIeaVp----------------e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 112 LSTVDLVVEAVF----------------EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp GTTCSEEEECCC----------------SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred HCCCCEEEEcCC----------------CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 135699885321 2223456788888888888766553
No 424
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=87.73 E-value=0.63 Score=38.98 Aligned_cols=63 Identities=16% Similarity=0.322 Sum_probs=43.5
Q ss_pred CcEEEecCCCChhhHHHHhc----CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----CCCCceeEEEe
Q 028957 2 TSVLELGCGNSRLSEGLYND----GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----FSNDCFDVVIE 73 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~----~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~D~v~~ 73 (201)
++|+=+||| ..+..+++. +. .|+.+|.+++.++.+.+.+ .+..+.+|+.+.. ..-...|++++
T Consensus 4 M~iiI~G~G--~vG~~la~~L~~~~~-~v~vId~d~~~~~~~~~~~------~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 4 MKIIILGAG--QVGGTLAENLVGENN-DITIVDKDGDRLRELQDKY------DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEEECCS--HHHHHHHHHTCSTTE-EEEEEESCHHHHHHHHHHS------SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHhc------CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 567777775 455555543 33 8999999999998877653 5688999987632 22345788875
No 425
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=87.68 E-value=2.7 Score=34.22 Aligned_cols=93 Identities=23% Similarity=0.246 Sum_probs=58.4
Q ss_pred CcEEEecCCCChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccceee
Q 028957 2 TSVLELGCGNSRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVLF 81 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~ 81 (201)
.+||.++.+.|.++..++.. ..+..+.-+...... +..++++. .. . .........||+|+...
T Consensus 47 ~~~l~~n~~~g~~~~~~~~~--~~~~~~~~~~~~~~~----l~~~~~~~-~~--~--~~~~~~~~~~d~v~~~~------ 109 (381)
T 3dmg_A 47 ERALDLNPGVGWGSLPLEGR--MAVERLETSRAAFRC----LTASGLQA-RL--A--LPWEAAAGAYDLVVLAL------ 109 (381)
T ss_dssp SEEEESSCTTSTTTGGGBTT--BEEEEEECBHHHHHH----HHHTTCCC-EE--C--CGGGSCTTCEEEEEEEC------
T ss_pred CcEEEecCCCCccccccCCC--CceEEEeCcHHHHHH----HHHcCCCc-cc--c--CCccCCcCCCCEEEEEC------
Confidence 57999999999887766422 267777655544433 44445432 11 1 11222356799998521
Q ss_pred ecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 82 VNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
++.+........|.++.+.|+|||.+++..
T Consensus 110 --------Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 110 --------PAGRGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp --------CGGGCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --------CcchhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 111222457889999999999999998765
No 426
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=87.65 E-value=2.4 Score=32.18 Aligned_cols=110 Identities=13% Similarity=0.208 Sum_probs=60.3
Q ss_pred CCcEEEecCCCChhhHHHHh----cCCCeEEEEECC---HHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----
Q 028957 1 MTSVLELGCGNSRLSEGLYN----DGITAITCIDLS---AVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F----- 63 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~~----~~~~~v~~vD~~---~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~----- 63 (201)
++++|--|++ |.++..+++ .|. +|+.++.+ .+.++.+.+.+...+ .++.++..|+.+.. +
T Consensus 11 ~k~vlVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 11 NKVIVIAGGI-KNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQG-AKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTT-CEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3567766655 445554444 465 88888754 445555555554443 36888999987632 1
Q ss_pred CCCceeEEEeccccceeeecCCCCCCCCCccHHH-----------HHHHHHHHhhcccCCcEEEEEec
Q 028957 64 SNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTK-----------VMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 64 ~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..+..|+++.+...... .|... ...++ .-.+.+.+.+.|+++|.++.+..
T Consensus 88 ~~g~iD~lvnnAg~~~~-----~~~~~--~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLK-----KPIVE--TSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHCSEEEEEECCCCCCS-----SCGGG--CCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HcCCCCEEEECCCCCCC-----CCccc--CCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 11468998876543211 11100 01122 22345556666777888877643
No 427
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=87.33 E-value=5.9 Score=35.26 Aligned_cols=97 Identities=15% Similarity=0.288 Sum_probs=62.7
Q ss_pred CcEEEecCCC--ChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc-----------C----CCceEEEEcccCCCCCC
Q 028957 2 TSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK-----------G----YKEVKVLEADMLDLPFS 64 (201)
Q Consensus 2 ~~vLDlG~G~--G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~-----------~----~~~i~~~~~d~~~~~~~ 64 (201)
++|--+|+|+ +.++..++..|. .|+..|++++.++.+++..... . ..++ ....|...+
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~aG~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~l--- 391 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARVGI-SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKL-RFSSSTKEL--- 391 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCE-EEESCGGGG---
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-chhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhh-cccCcHHHH---
Confidence 4677889987 345556666777 9999999999888777654221 0 1111 122222222
Q ss_pred CCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 65 NDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 65 ~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
...|+|+-. + +++.+-.+++++++-++++|+..+.-.+.
T Consensus 392 -~~aDlVIEA-----V-----------~E~l~iK~~vf~~le~~~~~~aIlASNTS 430 (742)
T 3zwc_A 392 -STVDLVVEA-----V-----------FEDMNLKKKVFAELSALCKPGAFLCTNTS 430 (742)
T ss_dssp -GSCSEEEEC-----C-----------CSCHHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred -hhCCEEEEe-----c-----------cccHHHHHHHHHHHhhcCCCCceEEecCC
Confidence 346888842 2 15667788999999999999877664443
No 428
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=87.17 E-value=1.5 Score=33.23 Aligned_cols=75 Identities=11% Similarity=0.177 Sum_probs=49.7
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C----CCCce
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F----SNDCF 68 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~----~~~~~ 68 (201)
++++|-.|++.| .++..+++.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. + ..+..
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 356777776554 23334445577 89999999888877777666554 37889999987632 0 01468
Q ss_pred eEEEecccc
Q 028957 69 DVVIEKATM 77 (201)
Q Consensus 69 D~v~~~~~l 77 (201)
|+++.+...
T Consensus 85 d~lv~nAg~ 93 (252)
T 3h7a_A 85 EVTIFNVGA 93 (252)
T ss_dssp EEEEECCCC
T ss_pred eEEEECCCc
Confidence 998876553
No 429
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=87.03 E-value=2.3 Score=32.18 Aligned_cols=73 Identities=11% Similarity=0.185 Sum_probs=49.1
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
++||-.|++ |.++..+ ++.|. +|++++.+++.++...+.+...+ .++.++..|+.+.. + ..+.
T Consensus 30 k~vlITGas-~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 30 QVAVVTGAS-RGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG-GEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp CEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC-CceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 566666654 5555444 44566 89999999988887777766554 36888999987632 0 1136
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 107 id~lv~~Ag~ 116 (262)
T 3rkr_A 107 CDVLVNNAGV 116 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8998876543
No 430
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=86.88 E-value=3.5 Score=32.44 Aligned_cols=90 Identities=17% Similarity=0.259 Sum_probs=54.0
Q ss_pred CcEEEecCCC--ChhhHHHHhcCCC-eEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 2 TSVLELGCGN--SRLSEGLYNDGIT-AITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 2 ~~vLDlG~G~--G~~~~~l~~~~~~-~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
++|.=+|+|. +.++..+.+.|.. +|+++|.+++.++.+.+ .+. +.....|.... .-...|+|+..-.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~--~~~~~~~~~~~--~~~~aDvVilavp-- 103 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGI--IDEGTTSIAKV--EDFSPDFVMLSSP-- 103 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTS--CSEEESCTTGG--GGGCCSEEEECSC--
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCC--cchhcCCHHHH--hhccCCEEEEeCC--
Confidence 4677788775 3445555556654 89999999988776653 221 11122232220 1235699885321
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEE
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 117 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 117 (201)
......+++++...++++..++-
T Consensus 104 ----------------~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 104 ----------------VRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp ----------------GGGHHHHHHHHHHHSCTTCEEEE
T ss_pred ----------------HHHHHHHHHHHhhccCCCcEEEE
Confidence 13456788889888988776553
No 431
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=86.87 E-value=2.3 Score=32.67 Aligned_cols=72 Identities=15% Similarity=0.206 Sum_probs=46.8
Q ss_pred CCcEEEecCCCChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----CC-----CC
Q 028957 1 MTSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-----ND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 66 (201)
+++||-.|+ +|.++..++ +.|. +|++++.+++.++...+.+...+..++.++..|+.+.. +. .+
T Consensus 28 ~k~vlITGa-sggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 28 GKKVIVTGA-SKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 356776665 455555444 4566 89999999888777665554444346888999987631 00 13
Q ss_pred ceeEEEec
Q 028957 67 CFDVVIEK 74 (201)
Q Consensus 67 ~~D~v~~~ 74 (201)
..|+++.+
T Consensus 106 ~iD~li~n 113 (286)
T 1xu9_A 106 GLDMLILN 113 (286)
T ss_dssp SCSEEEEC
T ss_pred CCCEEEEC
Confidence 68998865
No 432
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=86.72 E-value=4.5 Score=32.02 Aligned_cols=94 Identities=11% Similarity=0.144 Sum_probs=57.1
Q ss_pred CcEEEecCCC--ChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHh-------hcCC-----------CceEEEEcccCCC
Q 028957 2 TSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLL-------LKGY-----------KEVKVLEADMLDL 61 (201)
Q Consensus 2 ~~vLDlG~G~--G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~-------~~~~-----------~~i~~~~~d~~~~ 61 (201)
++|--+|+|. +.++..++..|. +|++.|.+++.++.+.+... ..+. .++.+. .|....
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~ea 84 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF-RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAEA 84 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHHH
Confidence 4567788875 345556666777 89999999999888765421 1121 123322 232211
Q ss_pred CCCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 62 PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 62 ~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
-...|+|+..-. +...-...+++++...++|+..++
T Consensus 85 ---v~~aDlVieavp----------------e~~~~k~~v~~~l~~~~~~~~Ii~ 120 (319)
T 2dpo_A 85 ---VEGVVHIQECVP----------------ENLDLKRKIFAQLDSIVDDRVVLS 120 (319)
T ss_dssp ---TTTEEEEEECCC----------------SCHHHHHHHHHHHHTTCCSSSEEE
T ss_pred ---HhcCCEEEEecc----------------CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 135699885321 233445678889999998877554
No 433
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=86.61 E-value=0.36 Score=39.14 Aligned_cols=100 Identities=17% Similarity=0.209 Sum_probs=50.9
Q ss_pred CCcEEEecCCC-ChhhHHHHh-cCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGN-SRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~-~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+++|+-+|+|. |......+. .|. +|+++|.+++.++.+.+.+ +. .+.....+..++.-.-..+|+|+......
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~---g~-~~~~~~~~~~~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVF---GG-RVITLTATEANIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---TT-SEEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhc---Cc-eEEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence 46788899853 333333332 366 9999999998777665432 21 22221111111110013579988643221
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
.. ....-+.+...+.+++||.++.+..
T Consensus 241 ~~---------------~~~~li~~~~l~~mk~gg~iV~v~~ 267 (369)
T 2eez_A 241 GA---------------KAPKLVTRDMLSLMKEGAVIVDVAV 267 (369)
T ss_dssp --------------------CCSCHHHHTTSCTTCEEEECC-
T ss_pred cc---------------ccchhHHHHHHHhhcCCCEEEEEec
Confidence 00 0001124556777899998776543
No 434
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=86.41 E-value=3.4 Score=31.32 Aligned_cols=76 Identities=14% Similarity=0.115 Sum_probs=49.2
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhh-cCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLL-KGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~-~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++.| .++..+++.|. +|+.++.+++.++.+.+.+.. .+..++.++..|+.+.. + ..+
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 356777776554 23344445577 899999999888777766654 33335888999987632 0 114
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 87 ~id~lvnnAg~ 97 (265)
T 3lf2_A 87 CASILVNNAGQ 97 (265)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 67998876554
No 435
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=86.35 E-value=2.6 Score=31.85 Aligned_cols=74 Identities=15% Similarity=0.217 Sum_probs=49.0
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++ |.++..+ ++.|. +|+.++.+++..+...+.+...+ .++.++..|+.+.. + ..+
T Consensus 12 ~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 12 DAVAIVTGAA-AGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAG-GKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TCEEEECSCS-SHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3556666654 4444444 44577 89999999988877777666544 47888999987632 0 013
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 89 ~id~lv~nAg~ 99 (256)
T 3gaf_A 89 KITVLVNNAGG 99 (256)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999876554
No 436
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=86.33 E-value=0.66 Score=38.21 Aligned_cols=43 Identities=14% Similarity=-0.070 Sum_probs=36.6
Q ss_pred cEEEecCCCChhhHHHHhcCC--Ce----EEEEECCHHHHHHHHHHHhh
Q 028957 3 SVLELGCGNSRLSEGLYNDGI--TA----ITCIDLSAVAVEKMQERLLL 45 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~~~--~~----v~~vD~~~~~~~~~~~~~~~ 45 (201)
+|+|+.||.|+++..+.+.|. .- |.++|+++.+++.-+.+...
T Consensus 12 rvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 12 KVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred eEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 799999999999999988763 34 88999999999888887754
No 437
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=86.31 E-value=2.6 Score=32.18 Aligned_cols=74 Identities=18% Similarity=0.168 Sum_probs=49.0
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++. .++..+ ++.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. + ..+
T Consensus 4 ~k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 4 DKVILITGASG-GIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAG-GTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCcc-HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35666666554 444444 44576 89999999988887777766554 36788888987632 0 114
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 438
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=86.26 E-value=5 Score=30.68 Aligned_cols=109 Identities=12% Similarity=0.153 Sum_probs=58.4
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEECCHH-HHHHHHHHHhhcCCCceEEEEcccCCCC-----CC-----CC
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCIDLSAV-AVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-----ND 66 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~-~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 66 (201)
+++|-.|+ +|.++..++ +.|. +|++++.+.. ..+.+.+.+...+ .++.++..|+.+.. +. .+
T Consensus 30 k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 30 KVALVTGA-GRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNG-SDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp CEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCC-CcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhC-CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45665555 455555554 4466 8999988754 3444444444333 36788888886532 00 13
Q ss_pred ceeEEEeccccceeeecCCCCCCCCCccHHHH-----------HHHHHHHhhcccCCcEEEEEec
Q 028957 67 CFDVVIEKATMEVLFVNSGDPWNPQPETVTKV-----------MAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 67 ~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~-----------~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..|+++.+...... .|... ...++. ..+++.+.+.|+.+|.++.+..
T Consensus 107 ~iD~lv~~Ag~~~~-----~~~~~--~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 164 (283)
T 1g0o_A 107 KLDIVCSNSGVVSF-----GHVKD--VTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS 164 (283)
T ss_dssp CCCEEEECCCCCCC-----CCGGG--CCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred CCCEEEECCCcCCC-----CCccc--CCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEec
Confidence 67998876543211 00000 011222 2344566666777788877643
No 439
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=86.25 E-value=3.1 Score=31.58 Aligned_cols=76 Identities=13% Similarity=0.083 Sum_probs=53.0
Q ss_pred CCcEEEecCCC--C---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----------CCC
Q 028957 1 MTSVLELGCGN--S---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSN 65 (201)
Q Consensus 1 ~~~vLDlG~G~--G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~~~ 65 (201)
|+++|--|+++ | ..+..+++.|. +|+.++.+++.++.+.+.+...+-.++.+++.|+.+.. -..
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 56788888643 3 24455566687 89999999888888877776655457888999987632 112
Q ss_pred CceeEEEecccc
Q 028957 66 DCFDVVIEKATM 77 (201)
Q Consensus 66 ~~~D~v~~~~~l 77 (201)
+..|+++.+..+
T Consensus 85 G~iD~lvnnAg~ 96 (256)
T 4fs3_A 85 GNIDGVYHSIAF 96 (256)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEecccc
Confidence 578988876543
No 440
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=85.89 E-value=3.3 Score=31.74 Aligned_cols=74 Identities=16% Similarity=0.155 Sum_probs=49.1
Q ss_pred CCcEEEecCCCChhhH----HHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSE----GLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~----~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++. .++. .+++.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. + ..+
T Consensus 24 ~k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 24 PQTAFVTGVSS-GIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAG-HDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp -CEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35677777554 4444 4445576 89999999988887777666544 36888999987632 0 113
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 101 ~id~lv~nAg~ 111 (279)
T 3sju_A 101 PIGILVNSAGR 111 (279)
T ss_dssp SCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 67998876543
No 441
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=85.82 E-value=2.4 Score=32.01 Aligned_cols=73 Identities=14% Similarity=0.213 Sum_probs=48.5
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|-.|++ |.++..+ ++.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. + ..+
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFP-GQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCST-TCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3556666654 4444444 44576 89999999988888777665443 36888999987632 0 013
Q ss_pred ceeEEEeccc
Q 028957 67 CFDVVIEKAT 76 (201)
Q Consensus 67 ~~D~v~~~~~ 76 (201)
..|+++.+..
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6799887654
No 442
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=85.71 E-value=3.4 Score=30.82 Aligned_cols=74 Identities=19% Similarity=0.265 Sum_probs=49.4
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----------CCCC
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~ 66 (201)
++++|-.|++ |.++.. +++.|. +|++++.+++..+...+.+...+ .++.++..|+.+.. -..+
T Consensus 5 ~k~vlITGas-~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 5 EKVALVTGAS-RGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKG-FKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3566666654 444444 445576 89999999988887777666554 37888999987632 1124
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 443
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=85.52 E-value=1.6 Score=33.93 Aligned_cols=74 Identities=22% Similarity=0.210 Sum_probs=48.8
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
+++|--|++ |.++..+ ++.|. +|+.++.+++.++.+.+.+...+..++.++..|+.+.. + ..+.
T Consensus 42 k~vlVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 42 RSVLVTGGT-KGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 456666654 4444444 45577 89999999887777776665544347888999987632 0 1146
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 120 iD~lvnnAg~ 129 (293)
T 3rih_A 120 LDVVCANAGI 129 (293)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7998876543
No 444
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=85.48 E-value=0.18 Score=40.84 Aligned_cols=89 Identities=17% Similarity=0.163 Sum_probs=52.2
Q ss_pred CCcEEEec-CCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----CCCCceeEEE
Q 028957 1 MTSVLELG-CGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG-~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D~v~ 72 (201)
|++||-.| +|. |..+..+++. |. +|++++ +++..+.+++ .+.+ .++ |..+.. .....+|+|+
T Consensus 184 g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~----lGa~--~v~--~~~~~~~~~~~~~~~g~D~vi 253 (375)
T 2vn8_A 184 GKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRK----LGAD--DVI--DYKSGSVEEQLKSLKPFDFIL 253 (375)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHH----TTCS--EEE--ETTSSCHHHHHHTSCCBSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHH----cCCC--EEE--ECCchHHHHHHhhcCCCCEEE
Confidence 46889998 443 7777777665 55 899988 6665555532 3322 122 211110 0114689988
Q ss_pred eccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 73 EKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 73 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
....- ....++...+.|+++|+++.+.
T Consensus 254 d~~g~--------------------~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 254 DNVGG--------------------STETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp ESSCT--------------------THHHHGGGGBCSSSCCEEEESC
T ss_pred ECCCC--------------------hhhhhHHHHHhhcCCcEEEEeC
Confidence 53221 0124566778899999988764
No 445
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=85.36 E-value=2.1 Score=32.96 Aligned_cols=74 Identities=15% Similarity=0.209 Sum_probs=47.4
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
+++|-.|++ |.++..+ ++.|. +|++++.+++.++.+.+.+...+...+.++..|+.+.. + ..+.
T Consensus 34 k~~lVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 34 RIALVTGGG-TGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCC-CHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 456666654 5555444 44566 89999999888777766654433234588999987632 0 1146
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 112 iD~lvnnAG~ 121 (281)
T 4dry_A 112 LDLLVNNAGS 121 (281)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 7999876543
No 446
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=85.18 E-value=3.6 Score=31.63 Aligned_cols=73 Identities=22% Similarity=0.369 Sum_probs=48.7
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
+++|--|++. .++..+ ++.|. +|+.++.+.+.++.+.+.+...+ .++.++..|+.+.. + ..+.
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 29 PVALITGAGS-GIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAG-GQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4566666554 444444 44576 89999999988887777665544 36888999987632 0 1146
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 106 iD~lVnnAg~ 115 (283)
T 3v8b_A 106 LDIVVANAGI 115 (283)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999876554
No 447
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=85.15 E-value=2.6 Score=31.47 Aligned_cols=71 Identities=10% Similarity=0.144 Sum_probs=45.9
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC------CCCCceeE
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP------FSNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~~D~ 70 (201)
+++||-.|++ |.++..+ ++.|. +|++++.+++.++...+.+. .++.+...|+.+.. -..+..|+
T Consensus 14 ~k~vlVTGas-~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 14 GKTSLITGAS-SGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 4567766655 4444444 44566 89999999888777665543 36788888876531 11246899
Q ss_pred EEecccc
Q 028957 71 VIEKATM 77 (201)
Q Consensus 71 v~~~~~l 77 (201)
++.+...
T Consensus 88 li~~Ag~ 94 (249)
T 3f9i_A 88 LVCNAGI 94 (249)
T ss_dssp EEECCC-
T ss_pred EEECCCC
Confidence 9876543
No 448
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=85.13 E-value=3.9 Score=31.23 Aligned_cols=75 Identities=16% Similarity=0.163 Sum_probs=49.2
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEECCHHHHHHHHHHHhhcCC--CceEEEEcccCCCC-----C-----C
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDLSAVAVEKMQERLLLKGY--KEVKVLEADMLDLP-----F-----S 64 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~-----~-----~ 64 (201)
++++|--|++ |.++.. +++.|. +|+.++.+++.++.+.+.+...+. .++.++..|+.+.. + .
T Consensus 11 ~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 11 DRTYLVTGGG-SGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 3567767655 444444 445576 899999999888877777665442 26788999987632 0 0
Q ss_pred CCceeEEEecccc
Q 028957 65 NDCFDVVIEKATM 77 (201)
Q Consensus 65 ~~~~D~v~~~~~l 77 (201)
.+..|+++.+...
T Consensus 89 ~g~id~lv~nAg~ 101 (281)
T 3svt_A 89 HGRLHGVVHCAGG 101 (281)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 1367988876543
No 449
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=85.09 E-value=3.3 Score=30.83 Aligned_cols=75 Identities=8% Similarity=0.184 Sum_probs=48.4
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccC--CCC-----C-----C
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADML--DLP-----F-----S 64 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~--~~~-----~-----~ 64 (201)
++++|-.|++ |.++..+ ++.|. +|+.++.+++.++...+.+...+.++..++..|+. +.. + .
T Consensus 14 ~k~vlITGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 14 GRVILVTGAA-RGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 3566666654 5554444 44576 89999999998888877776655456778887763 211 0 0
Q ss_pred CCceeEEEecccc
Q 028957 65 NDCFDVVIEKATM 77 (201)
Q Consensus 65 ~~~~D~v~~~~~l 77 (201)
.+..|+++.+...
T Consensus 92 ~g~id~lv~nAg~ 104 (247)
T 3i1j_A 92 FGRLDGLLHNASI 104 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 1367988876543
No 450
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=85.08 E-value=6.8 Score=30.61 Aligned_cols=91 Identities=18% Similarity=0.258 Sum_probs=55.1
Q ss_pred CcEEEecCCC--ChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 2 TSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 2 ~~vLDlG~G~--G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
++|--+|+|. +.++..++ .|. .|++.|.+++.++.+.+.+......++.+ ..|... -...|+|+..-.
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~~~~~~~~~~~l~~~~~~~i~~-~~~~~~----~~~aDlVieavp--- 82 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVSEKALEAAREQIPEELLSKIEF-TTTLEK----VKDCDIVMEAVF--- 82 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCHHHHHHHHHHSCGGGGGGEEE-ESSCTT----GGGCSEEEECCC---
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHhCCeEE-eCCHHH----HcCCCEEEEcCc---
Confidence 4677788886 35667777 777 89999999999988877621111113332 233321 245699986321
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFIS 117 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~ 117 (201)
+...-...++.++... |+..+..
T Consensus 83 -------------e~~~vk~~l~~~l~~~--~~~Ilas 105 (293)
T 1zej_A 83 -------------EDLNTKVEVLREVERL--TNAPLCS 105 (293)
T ss_dssp -------------SCHHHHHHHHHHHHTT--CCSCEEE
T ss_pred -------------CCHHHHHHHHHHHhcC--CCCEEEE
Confidence 2333345666776665 7665543
No 451
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=85.05 E-value=8.3 Score=29.04 Aligned_cols=73 Identities=15% Similarity=0.165 Sum_probs=40.5
Q ss_pred CcEEEecCCC-ChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC----------CCCC
Q 028957 2 TSVLELGCGN-SRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSND 66 (201)
Q Consensus 2 ~~vLDlG~G~-G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~ 66 (201)
+++|-.|+++ |.++..++ +.|. +|++++.++...+.+.+.....+ ...++..|+.+.. -..+
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5677777652 55555544 4566 89999987621122222111112 3467888877531 1124
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 87 ~iD~lv~~Ag~ 97 (265)
T 1qsg_A 87 KFDGFVHSIGF 97 (265)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999876543
No 452
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=84.99 E-value=3.7 Score=32.23 Aligned_cols=95 Identities=16% Similarity=0.112 Sum_probs=55.3
Q ss_pred CcEEEecCCC-C-hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEE-----EEcccCCCCCCCCceeEEEec
Q 028957 2 TSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKV-----LEADMLDLPFSNDCFDVVIEK 74 (201)
Q Consensus 2 ~~vLDlG~G~-G-~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~-----~~~d~~~~~~~~~~~D~v~~~ 74 (201)
.+|.-+|+|. | .++..+++.|. .|+.+ .+++.++..++.-.....+...+ ...|... ...+|+|+..
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~-~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~D~vila 93 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGH-EVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPSA----VQGADLVLFC 93 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC-EEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGGG----GTTCSEEEEC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCC-eEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHHH----cCCCCEEEEE
Confidence 5788888886 3 45555556666 88888 88887777665310000011111 0112111 2467988853
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
-- ......+++.+...++++..++....
T Consensus 94 vk------------------~~~~~~~l~~l~~~l~~~~~iv~~~n 121 (318)
T 3hwr_A 94 VK------------------STDTQSAALAMKPALAKSALVLSLQN 121 (318)
T ss_dssp CC------------------GGGHHHHHHHHTTTSCTTCEEEEECS
T ss_pred cc------------------cccHHHHHHHHHHhcCCCCEEEEeCC
Confidence 21 13567888999999998877665543
No 453
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=84.98 E-value=4.5 Score=31.71 Aligned_cols=76 Identities=18% Similarity=0.208 Sum_probs=50.6
Q ss_pred CCcEEEecCCCCh---hhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCC-CceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSR---LSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGY-KEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~---~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
+++||--|++.|. ++..+++.|. +|++++.+++.++.+.+.+...+. .++.++..|+.+.. + ..+
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 3567777766552 3444455577 899999999888877766654431 26888999987632 0 124
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 87 ~id~lv~nAg~ 97 (319)
T 3ioy_A 87 PVSILCNNAGV 97 (319)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 67999876554
No 454
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=84.94 E-value=3.2 Score=30.64 Aligned_cols=75 Identities=23% Similarity=0.213 Sum_probs=48.1
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----CC-----CC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-----ND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~ 66 (201)
++++|-.|++ |.++..+ ++.|. +|+.++.+.+.++.+.+.+....-.++.++..|+.+.. +. .+
T Consensus 2 ~k~vlITGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGAS-RGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 3567767654 4444444 44576 89999999888777666554221247888999987632 11 13
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 68998876554
No 455
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=84.93 E-value=0.38 Score=37.55 Aligned_cols=88 Identities=13% Similarity=0.111 Sum_probs=54.5
Q ss_pred CCcEEEecC-C-CChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEccc-CCC--CCCCCceeEEEec
Q 028957 1 MTSVLELGC-G-NSRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM-LDL--PFSNDCFDVVIEK 74 (201)
Q Consensus 1 ~~~vLDlG~-G-~G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~-~~~--~~~~~~~D~v~~~ 74 (201)
|++||-.|+ | .|..+..+++. |. +|++++.+++..+.+++ .+.. .++..+- .+. .. +.+|+|+.
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~----~ga~--~~~~~~~~~~~~~~~--~~~d~vid- 195 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLA----LGAE--EAATYAEVPERAKAW--GGLDLVLE- 195 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHH----TTCS--EEEEGGGHHHHHHHT--TSEEEEEE-
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh----cCCC--EEEECCcchhHHHHh--cCceEEEE-
Confidence 578999997 3 36667777665 55 99999998887777654 2322 1222110 010 01 46899885
Q ss_pred cccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEec
Q 028957 75 ATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSF 120 (201)
Q Consensus 75 ~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 120 (201)
..- ..++...+.|+++|+++....
T Consensus 196 ~g~----------------------~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 196 VRG----------------------KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp CSC----------------------TTHHHHHTTEEEEEEEEEC--
T ss_pred CCH----------------------HHHHHHHHhhccCCEEEEEeC
Confidence 221 245677889999999887543
No 456
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=84.91 E-value=0.31 Score=39.40 Aligned_cols=101 Identities=12% Similarity=0.166 Sum_probs=54.0
Q ss_pred CCcEEEecCCC-ChhhHHHHh-cCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGN-SRLSEGLYN-DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~-~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
+++|+-+|+|. |..+..++. .|. +|+++|.+++..+.+.+.... .+.....+..++.-.-..+|+|+......
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGS----RVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG----GSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCc----eeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 36889999864 444444433 366 999999999888887765432 22222211111100012579998533221
Q ss_pred eeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 121 (201)
.. ..| .-+.+...+.++++|.++-+...
T Consensus 242 ~~----~~~-----------~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 242 GR----RAP-----------ILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp TS----SCC-----------CCBCHHHHTTSCTTCEEEETTCT
T ss_pred CC----CCC-----------eecCHHHHhhCCCCCEEEEEecC
Confidence 00 000 00123455778999988765543
No 457
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=84.87 E-value=4.1 Score=31.04 Aligned_cols=73 Identities=21% Similarity=0.368 Sum_probs=43.5
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----CCCCceeEEE
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FSNDCFDVVI 72 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~D~v~ 72 (201)
|+++|-=|++.| ..+..+++.|. +|+.+|.+.. +.+.+.+...+ .++..++.|+.+.. +..+..|+++
T Consensus 9 GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~--~~~~~~~~~~g-~~~~~~~~Dv~d~~~v~~~~~~g~iDiLV 84 (247)
T 4hp8_A 9 GRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP--DETLDIIAKDG-GNASALLIDFADPLAAKDSFTDAGFDILV 84 (247)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC--HHHHHHHHHTT-CCEEEEECCTTSTTTTTTSSTTTCCCEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH--HHHHHHHHHhC-CcEEEEEccCCCHHHHHHHHHhCCCCEEE
Confidence 345555555544 23344455577 8999998742 22233333334 36788899987632 3456789988
Q ss_pred ecccc
Q 028957 73 EKATM 77 (201)
Q Consensus 73 ~~~~l 77 (201)
.+...
T Consensus 85 NNAGi 89 (247)
T 4hp8_A 85 NNAGI 89 (247)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 77554
No 458
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=84.81 E-value=1.2 Score=42.13 Aligned_cols=51 Identities=24% Similarity=0.305 Sum_probs=41.1
Q ss_pred cEEEecCCCChhhHHHHhcCC-CeEEEEECCHHHHHHHHHHHhhcCCCceEEEEccc
Q 028957 3 SVLELGCGNSRLSEGLYNDGI-TAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM 58 (201)
Q Consensus 3 ~vLDlG~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~ 58 (201)
++|||.||.|+++.-+.+.|. ..+.++|+++.+++..+.|+. ...++..|+
T Consensus 853 ~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p-----~~~~~~~DI 904 (1330)
T 3av4_A 853 RTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP-----GTTVFTEDC 904 (1330)
T ss_dssp EEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT-----TSEEECSCH
T ss_pred eEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC-----CCcEeeccH
Confidence 689999999999999998886 478999999999988877753 334555553
No 459
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.74 E-value=4.2 Score=30.88 Aligned_cols=73 Identities=12% Similarity=0.068 Sum_probs=47.8
Q ss_pred CCcEEEecCCCChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
+++||-.|+ +|.++..++ +.|. +|++++.+++..+...+.+...+ .++.++..|+.+.. + ..+
T Consensus 31 ~k~vlITGa-sggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 31 GEIVLITGA-GHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLG-AKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEECC-CchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcC-CeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 356776665 455555554 4466 89999999887776666555443 36888999987632 0 113
Q ss_pred ceeEEEeccc
Q 028957 67 CFDVVIEKAT 76 (201)
Q Consensus 67 ~~D~v~~~~~ 76 (201)
..|+++.+..
T Consensus 108 ~iD~li~~Ag 117 (272)
T 1yb1_A 108 DVSILVNNAG 117 (272)
T ss_dssp CCSEEEECCC
T ss_pred CCcEEEECCC
Confidence 6799887654
No 460
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=84.52 E-value=3.5 Score=31.00 Aligned_cols=74 Identities=22% Similarity=0.320 Sum_probs=48.6
Q ss_pred CcEEEecCCCChhhHH----HHhcCCCeEEEEECCHHHHHHHHHHHhhc--CCCceEEEEcccCCCC-----C-----CC
Q 028957 2 TSVLELGCGNSRLSEG----LYNDGITAITCIDLSAVAVEKMQERLLLK--GYKEVKVLEADMLDLP-----F-----SN 65 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~~~~~~~~~~~~~--~~~~i~~~~~d~~~~~-----~-----~~ 65 (201)
+++|--|++. .++.. +++.|. +|+.++.+++.++.+.+.+... +..++.++..|+.+.. + ..
T Consensus 8 k~~lVTGas~-GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 8 GLAIITGASQ-GIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 5667666654 44444 445577 8999999998887777665543 2246788999987632 0 11
Q ss_pred CceeEEEecccc
Q 028957 66 DCFDVVIEKATM 77 (201)
Q Consensus 66 ~~~D~v~~~~~l 77 (201)
+..|+++.+...
T Consensus 86 g~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 GAVDILVNAAAM 97 (250)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999876554
No 461
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=84.50 E-value=4.5 Score=30.22 Aligned_cols=72 Identities=17% Similarity=0.250 Sum_probs=46.4
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----CC-----CCc
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-----NDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~~ 67 (201)
++||-.|+ +|.++..++ +.|. +|++++.++...+...+.+...+ .++.++..|+.+.. +. .+.
T Consensus 14 k~vlItGa-sggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 14 RVAIVTGG-AQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEG-HDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCC-CchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 45676665 455555554 4566 89999999877766655554433 36888999987632 10 135
Q ss_pred eeEEEeccc
Q 028957 68 FDVVIEKAT 76 (201)
Q Consensus 68 ~D~v~~~~~ 76 (201)
.|+++.+..
T Consensus 91 id~vi~~Ag 99 (260)
T 3awd_A 91 VDILVACAG 99 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 799887654
No 462
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=84.46 E-value=3.5 Score=31.80 Aligned_cols=94 Identities=20% Similarity=0.269 Sum_probs=56.3
Q ss_pred CcEEEecCCC-C-hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhc---------CC---------CceEEEEcccCCC
Q 028957 2 TSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLK---------GY---------KEVKVLEADMLDL 61 (201)
Q Consensus 2 ~~vLDlG~G~-G-~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~---------~~---------~~i~~~~~d~~~~ 61 (201)
++|.-+|+|. | .++..++..|. +|+.+|.+++.++.+.+.+... +. .++.. ..|....
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHHH
Confidence 4677788875 2 34444555677 8999999999888777653211 00 11222 2232211
Q ss_pred CCCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 62 PFSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 62 ~~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
-...|+|+..-. +..+....+++++...++|+..++
T Consensus 83 ---~~~aDlVi~av~----------------~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 83 ---VKDADLVIEAVP----------------ESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp ---TTTCSEEEECCC----------------SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred ---hccCCEEEEecc----------------CcHHHHHHHHHHHHhhCCCCcEEE
Confidence 134699885321 233456778889999998877654
No 463
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=84.45 E-value=6.9 Score=29.75 Aligned_cols=85 Identities=16% Similarity=0.230 Sum_probs=50.9
Q ss_pred cEEEecCCC-C-hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEecccccee
Q 028957 3 SVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEVL 80 (201)
Q Consensus 3 ~vLDlG~G~-G-~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 80 (201)
+|.=+|||. | .++..+++.+. +|+++|.+++..+.+.+ .+... . ...|.... ...|+|+..-
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~----~g~~~-~-~~~~~~~~----~~~D~vi~av----- 65 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVE----RQLVD-E-AGQDLSLL----QTAKIIFLCT----- 65 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTSCS-E-EESCGGGG----TTCSEEEECS-----
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHh----CCCCc-c-ccCCHHHh----CCCCEEEEEC-----
Confidence 577788775 2 33344445566 89999999887766542 22211 1 12333222 3579988532
Q ss_pred eecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 81 FVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
.......+++++...++++..++
T Consensus 66 -------------~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 66 -------------PIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp -------------CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred -------------CHHHHHHHHHHHHhhCCCCCEEE
Confidence 12355678888888888876554
No 464
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.40 E-value=0.58 Score=38.08 Aligned_cols=41 Identities=17% Similarity=0.351 Sum_probs=28.5
Q ss_pred CCcEEEecCCC-ChhhHHHHh-cCCCeEEEEECCHHHHHHHHHH
Q 028957 1 MTSVLELGCGN-SRLSEGLYN-DGITAITCIDLSAVAVEKMQER 42 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~-~~~~~v~~vD~~~~~~~~~~~~ 42 (201)
|++|+-+|+|. |......+. .|. +|+++|.+++.++.+.+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~ 210 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAE 210 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHh
Confidence 57899999854 433333333 366 899999999887777654
No 465
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=84.02 E-value=5.2 Score=29.94 Aligned_cols=74 Identities=22% Similarity=0.311 Sum_probs=47.9
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|-.|++ |.++..+ ++.|. +|++++.+++.++...+.+...+ .++.++..|+.+.. + ..+
T Consensus 7 ~k~~lVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 7 GKVALITGAS-SGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAG-AKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3567777655 4454444 44566 89999999887777666555433 36788899987632 0 013
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 466
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=84.00 E-value=2.9 Score=31.79 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=47.7
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC----------CCCc
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF----------SNDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----------~~~~ 67 (201)
+++|--|++ |.++..+ ++.|. +|+.++.+++.++.+.+.+....-.++.++..|+.+... ..+.
T Consensus 21 k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 98 (266)
T 4egf_A 21 KRALITGAT-KGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG 98 (266)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 456666654 4444444 44566 899999998888777666544211378899999887430 0136
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 99 id~lv~nAg~ 108 (266)
T 4egf_A 99 LDVLVNNAGI 108 (266)
T ss_dssp CSEEEEECCC
T ss_pred CCEEEECCCc
Confidence 8998876543
No 467
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=83.71 E-value=3.4 Score=31.07 Aligned_cols=75 Identities=9% Similarity=0.110 Sum_probs=47.8
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEccc--CCCC----------CC
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADM--LDLP----------FS 64 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~--~~~~----------~~ 64 (201)
++++|--|++ |.++.. +++.|. +|++++.+++.++.+.+.+...+..++.++..|+ .+.. -.
T Consensus 12 ~k~vlVTGas-~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 12 DRIILVTGAS-DGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 3566766655 444444 445576 8999999988887776665544333678888888 3321 01
Q ss_pred CCceeEEEecccc
Q 028957 65 NDCFDVVIEKATM 77 (201)
Q Consensus 65 ~~~~D~v~~~~~l 77 (201)
.+..|+++.+...
T Consensus 90 ~g~id~lv~nAg~ 102 (252)
T 3f1l_A 90 YPRLDGVLHNAGL 102 (252)
T ss_dssp CSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2468999876553
No 468
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=83.42 E-value=3.6 Score=31.46 Aligned_cols=74 Identities=16% Similarity=0.112 Sum_probs=46.7
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++. .++..+ ++.|. +|+.++.+.+..+.+.+.+....-.++.++..|+.+.. + ..+
T Consensus 27 ~k~~lVTGas~-GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 27 DKVAFITGGGS-GIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCc-hHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35677777654 444444 44566 89999999877766655543321136888999987632 0 114
Q ss_pred ceeEEEeccc
Q 028957 67 CFDVVIEKAT 76 (201)
Q Consensus 67 ~~D~v~~~~~ 76 (201)
..|+++.+..
T Consensus 105 ~id~lv~nAg 114 (277)
T 4fc7_A 105 RIDILINCAA 114 (277)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 6899887654
No 469
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=83.29 E-value=5.3 Score=30.54 Aligned_cols=75 Identities=13% Similarity=0.234 Sum_probs=47.6
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECC----------------HHHHHHHHHHHhhcCCCceEEEEcccCCC
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLS----------------AVAVEKMQERLLLKGYKEVKVLEADMLDL 61 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~----------------~~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 61 (201)
|+++|--|++.| .++..+++.|. +|+++|.+ .+.++...+.+...+ .++.++..|+.+.
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~ 88 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHN-RRIVTAEVDVRDY 88 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTT-CCEEEEECCTTCH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcC-CceEEEEcCCCCH
Confidence 356777776554 23444455577 89999987 666666665555444 3788899998763
Q ss_pred C-----C-----CCCceeEEEecccc
Q 028957 62 P-----F-----SNDCFDVVIEKATM 77 (201)
Q Consensus 62 ~-----~-----~~~~~D~v~~~~~l 77 (201)
. + ..+..|+++.+...
T Consensus 89 ~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 89 DALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 2 0 11468998876554
No 470
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=83.26 E-value=5.3 Score=30.90 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=47.7
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECC------------HHHHHHHHHHHhhcCCCceEEEEcccCCCC---
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLS------------AVAVEKMQERLLLKGYKEVKVLEADMLDLP--- 62 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~------------~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--- 62 (201)
|+++|--|++.| .++..+++.|. +|+++|.+ ++.++...+.+...+ .++.++..|+.+..
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-RRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHH
Confidence 356777776554 23344455577 89999986 666666665555544 37888999987632
Q ss_pred --C-----CCCceeEEEecccc
Q 028957 63 --F-----SNDCFDVVIEKATM 77 (201)
Q Consensus 63 --~-----~~~~~D~v~~~~~l 77 (201)
+ ..+..|+++.+...
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHhCCCCEEEECCCC
Confidence 1 11468998876553
No 471
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.24 E-value=1.4 Score=37.23 Aligned_cols=87 Identities=11% Similarity=0.193 Sum_probs=51.0
Q ss_pred CCcEEEecCCC-ChhhHHHHhc-CCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccc
Q 028957 1 MTSVLELGCGN-SRLSEGLYND-GITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATME 78 (201)
Q Consensus 1 ~~~vLDlG~G~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~ 78 (201)
|++|+-+|+|. |......++. |. +|+++|.++...+.+.+ .+. .+ .++... -...|+|+....-.
T Consensus 274 GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~----~Ga---~~--~~l~e~---l~~aDvVi~atgt~ 340 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMM----EGF---DV--VTVEEA---IGDADIVVTATGNK 340 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH----TTC---EE--CCHHHH---GGGCSEEEECSSSS
T ss_pred cCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH----cCC---EE--ecHHHH---HhCCCEEEECCCCH
Confidence 57889999865 4444444443 55 99999999987666543 232 22 122221 13579998632111
Q ss_pred eeeecCCCCCCCCCccHHHHHHHH-HHHhhcccCCcEEEEEecC
Q 028957 79 VLFVNSGDPWNPQPETVTKVMAML-EGVHRVLKPDGLFISVSFG 121 (201)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~L~~gG~l~~~~~~ 121 (201)
. ++ .+..+.|++||+++.+...
T Consensus 341 ~---------------------~i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 341 D---------------------IIMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp C---------------------SBCHHHHHHSCTTCEEEECSSS
T ss_pred H---------------------HHHHHHHHhcCCCcEEEEeCCC
Confidence 1 11 2455678999998866543
No 472
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=83.22 E-value=5.4 Score=30.42 Aligned_cols=75 Identities=17% Similarity=0.186 Sum_probs=47.7
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEEC-------------CHHHHHHHHHHHhhcCCCceEEEEcccCCCC--
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDL-------------SAVAVEKMQERLLLKGYKEVKVLEADMLDLP-- 62 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~-------------~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-- 62 (201)
|+++|--|++.| .++..+++.|. +|+++|. +++.++.+.+.+...+ .++.++..|+.+..
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG-RKALTRVLDVRDDAAL 92 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHH
Confidence 356676766544 23334445576 8999997 6777777666665544 46888999987632
Q ss_pred ---C-----CCCceeEEEecccc
Q 028957 63 ---F-----SNDCFDVVIEKATM 77 (201)
Q Consensus 63 ---~-----~~~~~D~v~~~~~l 77 (201)
+ ..+..|+++.+...
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 0 01368998876543
No 473
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=83.22 E-value=5.4 Score=30.06 Aligned_cols=74 Identities=22% Similarity=0.277 Sum_probs=47.4
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|-.|++ |.++..+ ++.|. +|++++.+++.++...+.+...+ .++.++..|+.+.. + ..+
T Consensus 7 ~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 7 GKVCLVTGAG-GNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKG-VEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3567766654 4444444 44566 89999999887776666555433 36788889987632 0 013
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 67998876543
No 474
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=83.20 E-value=14 Score=30.83 Aligned_cols=96 Identities=14% Similarity=0.169 Sum_probs=55.9
Q ss_pred CcEEEecCCC--ChhhHHHHhcCCCeEEEEECCHHHH-HHHHHH---HhhcC-C---------CceEEEEcccCCCCCCC
Q 028957 2 TSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAV-EKMQER---LLLKG-Y---------KEVKVLEADMLDLPFSN 65 (201)
Q Consensus 2 ~~vLDlG~G~--G~~~~~l~~~~~~~v~~vD~~~~~~-~~~~~~---~~~~~-~---------~~i~~~~~d~~~~~~~~ 65 (201)
++|--||+|. +.++..+++.|. .|++.|.+++.. ....++ +...+ + .++.+ ..|... -
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~dl~a----l 128 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGI-ETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TSDFHK----L 128 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ESCGGG----C
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eCCHHH----H
Confidence 4677788886 455666677777 999999998721 111111 11112 1 12333 234322 2
Q ss_pred CceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 66 DCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 66 ~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
...|+|+..-. +...-...+++++.+.++|+..+...+
T Consensus 129 ~~aDlVIeAVp----------------e~~~vk~~v~~~l~~~~~~~aIlasnT 166 (460)
T 3k6j_A 129 SNCDLIVESVI----------------EDMKLKKELFANLENICKSTCIFGTNT 166 (460)
T ss_dssp TTCSEEEECCC----------------SCHHHHHHHHHHHHTTSCTTCEEEECC
T ss_pred ccCCEEEEcCC----------------CCHHHHHHHHHHHHhhCCCCCEEEecC
Confidence 35699985311 233445678899999999987765443
No 475
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=83.13 E-value=5.3 Score=30.06 Aligned_cols=74 Identities=12% Similarity=0.162 Sum_probs=47.5
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----CC-----C-
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-----N- 65 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~- 65 (201)
++++|--|+ +|.++..+ ++.|. +|++++.+++.++...+.+...+ .++.++..|+.+.. +. .
T Consensus 9 ~k~vlVTGa-s~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 9 GCTALVTGG-SRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TCEEEEESC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 356776665 45555444 44566 89999999887776655554433 36788889987632 10 1
Q ss_pred CceeEEEecccc
Q 028957 66 DCFDVVIEKATM 77 (201)
Q Consensus 66 ~~~D~v~~~~~l 77 (201)
+..|+++.+...
T Consensus 86 g~id~lv~~Ag~ 97 (260)
T 2ae2_A 86 GKLNILVNNAGI 97 (260)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 568999876543
No 476
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=83.08 E-value=5.2 Score=33.64 Aligned_cols=96 Identities=23% Similarity=0.326 Sum_probs=59.0
Q ss_pred CcEEEecCCC--ChhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhh-------cC-C---------CceEEEEcccCCCC
Q 028957 2 TSVLELGCGN--SRLSEGLYNDGITAITCIDLSAVAVEKMQERLLL-------KG-Y---------KEVKVLEADMLDLP 62 (201)
Q Consensus 2 ~~vLDlG~G~--G~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~-------~~-~---------~~i~~~~~d~~~~~ 62 (201)
++|--+|+|. +.++..+++.|. .|++.|.+++.++.+.+.... .+ . .++.+ ..|...
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~-~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~-~~~~~~-- 81 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGH-QVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP-VTDIHA-- 81 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE-ECCGGG--
T ss_pred CEEEEECcCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE-eCCHHH--
Confidence 3677788876 345556666777 899999999999887764321 11 0 12332 233322
Q ss_pred CCCCceeEEEeccccceeeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEEEEe
Q 028957 63 FSNDCFDVVIEKATMEVLFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFISVS 119 (201)
Q Consensus 63 ~~~~~~D~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 119 (201)
-...|+|+..-. +...-...+++++.+.++++..+...+
T Consensus 82 --~~~aDlVIeAVp----------------e~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 82 --LAAADLVIEAAS----------------ERLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp --GGGCSEEEECCC----------------CCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred --hcCCCEEEEcCC----------------CcHHHHHHHHHHHHHhhccCcEEEecC
Confidence 235699885311 233445688899999998877654433
No 477
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=83.02 E-value=2.9 Score=32.08 Aligned_cols=74 Identities=11% Similarity=0.154 Sum_probs=48.7
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++. .++.. +++.|. +|++++.+++.++...+.+...+ .++.++..|+.+.. + ..+
T Consensus 32 gk~~lVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 32 GKRALITGAST-GIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVG-GKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35677666654 44444 445576 89999999887777766665544 36788999987632 1 113
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 109 ~iD~lvnnAg~ 119 (276)
T 3r1i_A 109 GIDIAVCNAGI 119 (276)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999876543
No 478
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=82.99 E-value=7.5 Score=30.60 Aligned_cols=57 Identities=19% Similarity=0.261 Sum_probs=37.5
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEE-CCHHHHHHHHHHHh-hcCCCceEEEEcccCCC
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCID-LSAVAVEKMQERLL-LKGYKEVKVLEADMLDL 61 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD-~~~~~~~~~~~~~~-~~~~~~i~~~~~d~~~~ 61 (201)
+++|-.|+ +|.++..++ +.|. +|++++ .+++.++.+.+.+. ..+ .++.++..|+.+.
T Consensus 47 k~~lVTGa-s~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~d~ 109 (328)
T 2qhx_A 47 PVALVTGA-AKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRP-NSAITVQADLSNV 109 (328)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSS
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcC-CeEEEEEeeCCCc
Confidence 45565554 455555554 4466 899999 88887776666554 222 3688899998764
No 479
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=82.99 E-value=5.1 Score=30.47 Aligned_cols=75 Identities=19% Similarity=0.221 Sum_probs=47.1
Q ss_pred CCcEEEecCCCC---hhhHHHHhcCCCeEEEEECC------------HHHHHHHHHHHhhcCCCceEEEEcccCCCC---
Q 028957 1 MTSVLELGCGNS---RLSEGLYNDGITAITCIDLS------------AVAVEKMQERLLLKGYKEVKVLEADMLDLP--- 62 (201)
Q Consensus 1 ~~~vLDlG~G~G---~~~~~l~~~~~~~v~~vD~~------------~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--- 62 (201)
|+++|--|++.| .++..+++.|. +|+++|.+ .+.++...+.+...+ .++.++..|+.+..
T Consensus 13 gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 13 GKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-SRIVARQADVRDRESLS 90 (278)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT-CCEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcC-CeEEEEeCCCCCHHHHH
Confidence 356777775543 23344445577 89999976 666666655554444 37889999987632
Q ss_pred --C-----CCCceeEEEecccc
Q 028957 63 --F-----SNDCFDVVIEKATM 77 (201)
Q Consensus 63 --~-----~~~~~D~v~~~~~l 77 (201)
+ ..+..|+++.+...
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 1 01368999876554
No 480
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=82.88 E-value=4.8 Score=31.27 Aligned_cols=90 Identities=19% Similarity=0.262 Sum_probs=51.6
Q ss_pred CcEEEecCCC-C-hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 2 TSVLELGCGN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 2 ~~vLDlG~G~-G-~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
++|--+|+|. | .++..+++.|. +|++.|.+++.++.+.+. +. .....+.... -...|+|+..-.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~----g~---~~~~~~~~e~---~~~aDvvi~~vp--- 73 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAE----GA---CGAAASAREF---AGVVDALVILVV--- 73 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHT----TC---SEEESSSTTT---TTTCSEEEECCS---
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHc----CC---ccccCCHHHH---HhcCCEEEEECC---
Confidence 3577787765 2 34444455566 899999999877766542 21 1123333322 134699886311
Q ss_pred eeecCCCCCCCCCccHHHHHHHH---HHHhhcccCCcEEEEEe
Q 028957 80 LFVNSGDPWNPQPETVTKVMAML---EGVHRVLKPDGLFISVS 119 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~L~~gG~l~~~~ 119 (201)
.....+.++ +.+...+++|..++-.+
T Consensus 74 --------------~~~~~~~v~~~~~~l~~~l~~g~ivv~~s 102 (303)
T 3g0o_A 74 --------------NAAQVRQVLFGEDGVAHLMKPGSAVMVSS 102 (303)
T ss_dssp --------------SHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred --------------CHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence 112345555 66677788876665443
No 481
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=82.70 E-value=1 Score=36.06 Aligned_cols=31 Identities=3% Similarity=-0.021 Sum_probs=21.7
Q ss_pred CcEEEecC-CC-ChhhHHHHhc-CCCeEEEEECCH
Q 028957 2 TSVLELGC-GN-SRLSEGLYND-GITAITCIDLSA 33 (201)
Q Consensus 2 ~~vLDlG~-G~-G~~~~~l~~~-~~~~v~~vD~~~ 33 (201)
++||-.|+ |. |.++..+++. |. +++++.-+.
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~ 202 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDR 202 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCC
T ss_pred cEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCc
Confidence 78898887 43 7777777775 55 777776443
No 482
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=82.56 E-value=5.7 Score=29.49 Aligned_cols=71 Identities=17% Similarity=0.195 Sum_probs=46.7
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++. .++.. +++.|. +|++++.+++.++...+.+.. ++.++..|+.+.. + ..+
T Consensus 3 ~k~vlVTGas~-GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~~g 76 (235)
T 3l6e_A 3 LGHIIVTGAGS-GLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGN----AVIGIVADLAHHEDVDVAFAAAVEWGG 76 (235)
T ss_dssp CCEEEEESTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG----GEEEEECCTTSHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcC----CceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 35677777654 44444 445576 899999998888777665532 5788999987632 0 013
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 77 ~id~lvnnAg~ 87 (235)
T 3l6e_A 77 LPELVLHCAGT 87 (235)
T ss_dssp SCSEEEEECCC
T ss_pred CCcEEEECCCC
Confidence 67998876544
No 483
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=82.49 E-value=6.2 Score=29.98 Aligned_cols=73 Identities=15% Similarity=0.168 Sum_probs=47.3
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CC-C
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN-D 66 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~-~ 66 (201)
+++|-.|+ +|.++..+ ++.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. + .. +
T Consensus 22 k~vlVTGa-s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 22 TTALVTGG-SKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKG-LNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp CEEEEESC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CEEEEECC-cchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 55676665 45555444 44566 89999999887776665554433 36788899987532 1 01 5
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 99 ~id~lv~nAg~ 109 (273)
T 1ae1_A 99 KLNILVNNAGV 109 (273)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 78999876543
No 484
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=82.36 E-value=6.2 Score=30.10 Aligned_cols=73 Identities=16% Similarity=0.195 Sum_probs=47.0
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
+++|-.|++ |.++..+ ++.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. + ..+.
T Consensus 23 k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 23 EVALVTGAT-SGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAG-VEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp CEEEEETCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 567767654 4454444 44566 89999999887776665554433 36788889987532 0 1236
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 100 iD~lv~~Ag~ 109 (277)
T 2rhc_B 100 VDVLVNNAGR 109 (277)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8998876543
No 485
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=82.29 E-value=5.9 Score=30.11 Aligned_cols=74 Identities=18% Similarity=0.247 Sum_probs=42.3
Q ss_pred CCcEEEecCC-CChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CC
Q 028957 1 MTSVLELGCG-NSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SN 65 (201)
Q Consensus 1 ~~~vLDlG~G-~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~ 65 (201)
++++|-.|++ +|.++..++ +.|. +|++++.+++ .+...+.+.... .++.++..|+.+.. + ..
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~-~~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNES-LEKRVRPIAQEL-NSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTT-THHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHH-HHHHHHHHHHhc-CCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4578888875 255555554 4466 8999998765 222222222211 24677888887632 0 12
Q ss_pred CceeEEEecccc
Q 028957 66 DCFDVVIEKATM 77 (201)
Q Consensus 66 ~~~D~v~~~~~l 77 (201)
+..|+++.+...
T Consensus 83 g~id~lv~nAg~ 94 (275)
T 2pd4_A 83 GSLDFIVHSVAF 94 (275)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 468999876543
No 486
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=82.16 E-value=4.7 Score=30.34 Aligned_cols=71 Identities=11% Similarity=0.164 Sum_probs=46.2
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC--------C---CCC
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP--------F---SND 66 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--------~---~~~ 66 (201)
+++|--|+ +|.++..++ +.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. . ..+
T Consensus 6 k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 6 QVCVVTGA-SRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLG-GQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp CEEEESST-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHS-SEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CEEEEeCC-CchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcC-CceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 45666664 455555554 4566 89999999887776665554433 36788899987632 0 035
Q ss_pred ceeEEEecc
Q 028957 67 CFDVVIEKA 75 (201)
Q Consensus 67 ~~D~v~~~~ 75 (201)
..|+++.+.
T Consensus 83 ~id~lvnnA 91 (260)
T 2qq5_A 83 RLDVLVNNA 91 (260)
T ss_dssp CCCEEEECC
T ss_pred CceEEEECC
Confidence 679998776
No 487
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=82.13 E-value=4.4 Score=30.92 Aligned_cols=73 Identities=11% Similarity=0.172 Sum_probs=47.5
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
+++|--|+ +|.++..+ ++.|. +|++++.+++..+...+.+...+ .++.++..|+.+.. + ..+.
T Consensus 29 k~~lVTGa-s~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (270)
T 3ftp_A 29 QVAIVTGA-SRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAG-LEGRGAVLNVNDATAVDALVESTLKEFGA 105 (270)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHT-CCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 45665554 45554444 44576 89999999888877776665544 36788888987632 0 1136
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 106 iD~lvnnAg~ 115 (270)
T 3ftp_A 106 LNVLVNNAGI 115 (270)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8998876543
No 488
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=81.96 E-value=3.9 Score=31.16 Aligned_cols=67 Identities=16% Similarity=0.215 Sum_probs=44.9
Q ss_pred CcEEEecCCCChhhHH----HHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC---------CCCCce
Q 028957 2 TSVLELGCGNSRLSEG----LYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP---------FSNDCF 68 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---------~~~~~~ 68 (201)
+++|-.|++. .++.. +++.|. +|++++.+.+.++.+.+.+. .++.++..|+.+.. ...+..
T Consensus 31 k~vlVTGas~-GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i 104 (281)
T 3ppi_A 31 ASAIVSGGAG-GLGEATVRRLHADGL-GVVIADLAAEKGKALADELG----NRAEFVSTNVTSEDSVLAAIEAANQLGRL 104 (281)
T ss_dssp EEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHC----TTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhC----CceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4567667654 44444 445576 89999999888777666552 36889999987632 122467
Q ss_pred eEEEec
Q 028957 69 DVVIEK 74 (201)
Q Consensus 69 D~v~~~ 74 (201)
|+++.+
T Consensus 105 d~lv~~ 110 (281)
T 3ppi_A 105 RYAVVA 110 (281)
T ss_dssp EEEEEC
T ss_pred CeEEEc
Confidence 888865
No 489
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=81.94 E-value=2.4 Score=32.63 Aligned_cols=73 Identities=14% Similarity=0.203 Sum_probs=47.8
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|--|++. .++.. +++.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. + ..+
T Consensus 8 gk~vlVTGas~-GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 8 GKIAIVTGASS-GIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGG-GEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTT-CCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 35566666554 44444 445576 89999999988877777665443 36788888887632 0 114
Q ss_pred ceeEEEeccc
Q 028957 67 CFDVVIEKAT 76 (201)
Q Consensus 67 ~~D~v~~~~~ 76 (201)
..|+++.+..
T Consensus 85 ~iD~lvnnAg 94 (280)
T 3tox_A 85 GLDTAFNNAG 94 (280)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899887654
No 490
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=81.81 E-value=2.5 Score=32.30 Aligned_cols=74 Identities=15% Similarity=0.195 Sum_probs=48.8
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
|+++|--|++ |.++..+ ++.|. +|+.++.+++.++...+.+...+ .++.++..|+.+.. + ..+
T Consensus 26 gk~~lVTGas-~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 26 GRTALVTGSS-RGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVG-HDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTT-CCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 3556666654 4444444 44576 89999999988887777666544 36788888887632 0 123
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 103 ~iD~lv~nAg~ 113 (271)
T 4ibo_A 103 DVDILVNNAGI 113 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999876553
No 491
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=81.81 E-value=2.2 Score=32.47 Aligned_cols=72 Identities=14% Similarity=0.217 Sum_probs=43.3
Q ss_pred CCcEEEecC-CCChhhHHHHh----cCCCeEEEEECCHHH-HHHHHHHHhhcCCCceEEEEcccCCCC-----CC-----
Q 028957 1 MTSVLELGC-GNSRLSEGLYN----DGITAITCIDLSAVA-VEKMQERLLLKGYKEVKVLEADMLDLP-----FS----- 64 (201)
Q Consensus 1 ~~~vLDlG~-G~G~~~~~l~~----~~~~~v~~vD~~~~~-~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~----- 64 (201)
++++|-.|+ |+|.++..+++ .|. +|++++.+++. ++...+. .+ .++.++..|+.+.. +.
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDR---LP-AKAPLLELDVQNEEHLASLAGRVTEA 81 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTT---SS-SCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHh---cC-CCceEEEccCCCHHHHHHHHHHHHHH
Confidence 356888887 36666655544 466 89999987643 2333221 12 25678888887632 00
Q ss_pred CC---ceeEEEecccc
Q 028957 65 ND---CFDVVIEKATM 77 (201)
Q Consensus 65 ~~---~~D~v~~~~~l 77 (201)
.+ ..|+++.+...
T Consensus 82 ~g~~~~iD~lv~nAg~ 97 (269)
T 2h7i_A 82 IGAGNKLDGVVHSIGF 97 (269)
T ss_dssp HCTTCCEEEEEECCCC
T ss_pred hCCCCCceEEEECCcc
Confidence 12 68999876543
No 492
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=81.75 E-value=9.7 Score=29.14 Aligned_cols=83 Identities=18% Similarity=0.305 Sum_probs=50.2
Q ss_pred cEEEecC-CC-C-hhhHHHHhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCCCCCceeEEEeccccce
Q 028957 3 SVLELGC-GN-S-RLSEGLYNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPFSNDCFDVVIEKATMEV 79 (201)
Q Consensus 3 ~vLDlG~-G~-G-~~~~~l~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~l~~ 79 (201)
+|.=+|+ |. | .++..++..+. +|+++|.+++..+.+.+ .+. .. .+.... ....|+|+..-
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~----~g~---~~--~~~~~~---~~~aDvVi~av---- 75 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQG----MGI---PL--TDGDGW---IDEADVVVLAL---- 75 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHH----TTC---CC--CCSSGG---GGTCSEEEECS----
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHh----cCC---Cc--CCHHHH---hcCCCEEEEcC----
Confidence 6778888 75 2 34444555566 89999999887766654 222 11 121111 13579988532
Q ss_pred eeecCCCCCCCCCccHHHHHHHHHHHhhcccCCcEEE
Q 028957 80 LFVNSGDPWNPQPETVTKVMAMLEGVHRVLKPDGLFI 116 (201)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~ 116 (201)
.......+++.+...++++..++
T Consensus 76 --------------~~~~~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 76 --------------PDNIIEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp --------------CHHHHHHHHHHHGGGSCTTCEEE
T ss_pred --------------CchHHHHHHHHHHHhCCCCCEEE
Confidence 12346778888888888766544
No 493
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=81.49 E-value=5.7 Score=29.52 Aligned_cols=72 Identities=13% Similarity=0.205 Sum_probs=46.2
Q ss_pred CcEEEecCCCChhhHHHHh----cCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----CC-----CCc
Q 028957 2 TSVLELGCGNSRLSEGLYN----DGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----FS-----NDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~~----~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~-----~~~ 67 (201)
++||-.| |+|.++..+++ .|. +|++++.+++..+...+.+...+ .++.++.+|+.+.. +. .+.
T Consensus 12 ~~vlVtG-asggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 12 KCAIITG-AGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLG-GQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CEEEETT-TTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CEEEEEC-CccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4566555 55666655544 465 89999999887766655554433 36788889987532 10 136
Q ss_pred eeEEEeccc
Q 028957 68 FDVVIEKAT 76 (201)
Q Consensus 68 ~D~v~~~~~ 76 (201)
.|+++.+..
T Consensus 89 ~d~vi~~Ag 97 (255)
T 1fmc_A 89 VDILVNNAG 97 (255)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899886544
No 494
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=81.43 E-value=5.1 Score=30.71 Aligned_cols=75 Identities=13% Similarity=0.109 Sum_probs=47.4
Q ss_pred CCcEEEecCCCChhhHH----HHhcCCCeEEEEEC-CHHHHHHHHHHHhhcCCCceEEEEcccCCCC----------CCC
Q 028957 1 MTSVLELGCGNSRLSEG----LYNDGITAITCIDL-SAVAVEKMQERLLLKGYKEVKVLEADMLDLP----------FSN 65 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~-~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~~~ 65 (201)
++++|--|++. .++.. +++.|. +|+.++. +++.++...+.+....-.++.++..|+.+.. -..
T Consensus 25 ~k~~lVTGas~-GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 25 TKTAVITGSTS-GIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TCEEEEETCSS-HHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 35677777654 44444 445576 8999998 6666666666555432347888889987632 012
Q ss_pred CceeEEEecccc
Q 028957 66 DCFDVVIEKATM 77 (201)
Q Consensus 66 ~~~D~v~~~~~l 77 (201)
+..|+++.+...
T Consensus 103 g~iD~lv~nAg~ 114 (281)
T 3v2h_A 103 GGADILVNNAGV 114 (281)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999876554
No 495
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=81.35 E-value=3 Score=32.08 Aligned_cols=71 Identities=23% Similarity=0.220 Sum_probs=45.6
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-CCCceeE
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-SNDCFDV 70 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-~~~~~D~ 70 (201)
|+++|--|++ |.++..+ ++.|. +|++++.+++..+.+.+.+ + .++.++..|+.+.. + .-+..|+
T Consensus 16 gk~vlVTGas-~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 16 QRTVVITGAN-SGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTM---A-GQVEVRELDLQDLSSVRRFADGVSGADV 89 (291)
T ss_dssp TCEEEEECCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS---S-SEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh---c-CCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 3566766655 5554444 44566 8999999987766654433 2 36889999987632 0 1146899
Q ss_pred EEecccc
Q 028957 71 VIEKATM 77 (201)
Q Consensus 71 v~~~~~l 77 (201)
++.+...
T Consensus 90 lv~nAg~ 96 (291)
T 3rd5_A 90 LINNAGI 96 (291)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9876554
No 496
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=81.32 E-value=6.3 Score=30.41 Aligned_cols=73 Identities=15% Similarity=0.187 Sum_probs=46.9
Q ss_pred CcEEEecCCCChhhHHHH----hcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCCc
Q 028957 2 TSVLELGCGNSRLSEGLY----NDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SNDC 67 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l~----~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~~ 67 (201)
+++|-.|++ |.++..++ +.|. +|++++.+++.++.+.+.+...+ .++.++..|+.+.. + ..+.
T Consensus 35 k~vlVTGas-~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (291)
T 3cxt_A 35 KIALVTGAS-YGIGFAIASAYAKAGA-TIVFNDINQELVDRGMAAYKAAG-INAHGYVCDVTDEDGIQAMVAQIESEVGI 111 (291)
T ss_dssp CEEEEETCS-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 566766654 55555444 4566 89999999887776665554433 36788889987632 1 1245
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 112 iD~lvnnAg~ 121 (291)
T 3cxt_A 112 IDILVNNAGI 121 (291)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCc
Confidence 8999876543
No 497
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=81.21 E-value=7.4 Score=29.15 Aligned_cols=73 Identities=19% Similarity=0.351 Sum_probs=47.0
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
++++|-.|++ |.++..+ ++.|. +|++++.+++..+...+.+...+ .++.++..|+.+.. + ..+
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 2 KKVALVTGAG-QGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAG-GHAVAVKVDVSDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT-CCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3566766654 4454444 44566 89999999887766655554433 36788889987632 0 113
Q ss_pred ceeEEEeccc
Q 028957 67 CFDVVIEKAT 76 (201)
Q Consensus 67 ~~D~v~~~~~ 76 (201)
..|+++.+..
T Consensus 79 ~id~lv~nAg 88 (256)
T 1geg_A 79 GFDVIVNNAG 88 (256)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899987654
No 498
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.95 E-value=6.4 Score=30.01 Aligned_cols=74 Identities=20% Similarity=0.286 Sum_probs=46.9
Q ss_pred CcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCC--CceEEEEcccCCCC-----CC-----C
Q 028957 2 TSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGY--KEVKVLEADMLDLP-----FS-----N 65 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~-----~~-----~ 65 (201)
+++|-.|+ +|.++..+ ++.|. +|++++.+++.++...+.+...+. .++.++..|+.+.. +. .
T Consensus 7 k~vlVTGa-s~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 7 KTVIITGS-SNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp CEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECC-CChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 45666665 45555444 44566 899999998877766665544331 16788999987632 10 1
Q ss_pred CceeEEEecccc
Q 028957 66 DCFDVVIEKATM 77 (201)
Q Consensus 66 ~~~D~v~~~~~l 77 (201)
+..|+++.+...
T Consensus 85 g~iD~lv~nAg~ 96 (280)
T 1xkq_A 85 GKIDVLVNNAGA 96 (280)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 367999876543
No 499
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=80.79 E-value=7.5 Score=29.72 Aligned_cols=73 Identities=23% Similarity=0.298 Sum_probs=46.5
Q ss_pred CcEEEecCCCChhhHH----HHhcCCCeEEEEEC-CHHHHHHHHHHHhhcCCCceEEEEcccCCCC-----C-----CCC
Q 028957 2 TSVLELGCGNSRLSEG----LYNDGITAITCIDL-SAVAVEKMQERLLLKGYKEVKVLEADMLDLP-----F-----SND 66 (201)
Q Consensus 2 ~~vLDlG~G~G~~~~~----l~~~~~~~v~~vD~-~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~-----~~~ 66 (201)
+++|--|++. .++.. +++.|. +|+.++. +++.++...+.+...+ .++.++..|+.+.. + ..+
T Consensus 30 k~~lVTGas~-GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 30 PVAIVTGGRR-GIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLG-ARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTT-CCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CEEEEecCCC-HHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4566666554 44444 445576 8999985 7777766666655544 37889999987642 0 013
Q ss_pred ceeEEEecccc
Q 028957 67 CFDVVIEKATM 77 (201)
Q Consensus 67 ~~D~v~~~~~l 77 (201)
..|+++.+...
T Consensus 107 ~iD~lvnnAg~ 117 (280)
T 4da9_A 107 RIDCLVNNAGI 117 (280)
T ss_dssp CCCEEEEECC-
T ss_pred CCCEEEECCCc
Confidence 68999876554
No 500
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=80.77 E-value=2.9 Score=32.02 Aligned_cols=74 Identities=14% Similarity=0.224 Sum_probs=48.1
Q ss_pred CCcEEEecCCCChhhHHH----HhcCCCeEEEEECCHHHHHHHHHHHhhcCCCceEEEEcccCCCCC---------CCCc
Q 028957 1 MTSVLELGCGNSRLSEGL----YNDGITAITCIDLSAVAVEKMQERLLLKGYKEVKVLEADMLDLPF---------SNDC 67 (201)
Q Consensus 1 ~~~vLDlG~G~G~~~~~l----~~~~~~~v~~vD~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---------~~~~ 67 (201)
|+++|--|++ |.++..+ ++.|. +|++++.+++..+.+.+.+...+ .++.++..|+.+... ..+.
T Consensus 33 gk~~lVTGas-~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 33 GRTALVTGSS-RGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG-GTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT-CCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 3556666654 4444444 44576 89999998877776666665544 478889999876420 0146
Q ss_pred eeEEEecccc
Q 028957 68 FDVVIEKATM 77 (201)
Q Consensus 68 ~D~v~~~~~l 77 (201)
.|+++.+...
T Consensus 110 iD~lvnnAg~ 119 (275)
T 4imr_A 110 VDILVINASA 119 (275)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8998876553
Done!