Query 028960
Match_columns 201
No_of_seqs 142 out of 1471
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 08:10:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2q2g_A HSP40 protein, heat sho 100.0 3.6E-50 1.2E-54 316.9 25.5 177 6-183 2-179 (180)
2 3agx_A DNAJ homolog subfamily 100.0 3.4E-49 1.2E-53 311.6 25.3 176 7-183 2-179 (181)
3 1c3g_A Heat shock protein 40; 100.0 2.1E-47 7E-52 298.7 20.7 169 8-180 1-170 (170)
4 1nlt_A Protein YDJ1, mitochond 100.0 5.5E-47 1.9E-51 312.5 22.6 177 3-180 7-248 (248)
5 3lz8_A Putative chaperone DNAJ 100.0 9.6E-46 3.3E-50 315.8 23.8 178 4-185 137-316 (329)
6 3i38_A Putative chaperone DNAJ 100.0 1.2E-28 4.2E-33 178.9 13.1 96 87-186 2-97 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 3.8E-27 1.3E-31 174.1 12.1 95 91-186 1-99 (121)
8 3i38_A Putative chaperone DNAJ 99.5 9.7E-14 3.3E-18 100.2 7.6 78 5-96 9-86 (109)
9 1xao_A YDJ1, mitochondrial pro 99.4 7.9E-14 2.7E-18 102.5 5.1 82 5-98 4-90 (121)
10 3agx_A DNAJ homolog subfamily 99.2 2.1E-11 7.2E-16 95.5 8.4 78 5-94 90-169 (181)
11 2q2g_A HSP40 protein, heat sho 99.2 2.5E-11 8.6E-16 94.9 8.5 77 5-93 90-168 (180)
12 1c3g_A Heat shock protein 40; 99.2 1.6E-11 5.5E-16 95.2 6.7 77 5-93 84-162 (170)
13 1nlt_A Protein YDJ1, mitochond 99.2 1.5E-11 5.1E-16 100.8 6.8 82 5-98 159-245 (248)
14 3lz8_A Putative chaperone DNAJ 99.1 1.8E-10 6.3E-15 97.9 7.6 77 5-95 229-305 (329)
15 2ctt_A DNAJ homolog subfamily 96.6 4.9E-05 1.7E-09 53.7 -4.2 31 7-37 1-31 (104)
16 1msz_A DNA-binding protein smu 44.5 15 0.0005 24.5 2.5 23 164-186 35-57 (86)
17 2jnz_A PHL P 3 allergen; timot 43.3 78 0.0027 21.8 6.2 84 47-141 13-105 (108)
18 2hcz_X Beta-expansin 1A; domai 35.5 1.3E+02 0.0043 23.8 7.1 103 23-141 127-239 (245)
19 2pi2_E Replication protein A 1 34.7 1.3E+02 0.0044 21.7 9.0 66 112-184 58-128 (142)
20 3zxf_A Galectin-7; sugar bindi 29.2 76 0.0026 22.5 4.5 44 126-169 8-59 (138)
21 2wkk_A Galectin-2; sugar-bindi 28.1 1.4E+02 0.0047 21.5 5.8 43 127-169 10-58 (150)
22 1mli_A Muconolactone isomerase 26.9 80 0.0027 21.3 3.9 24 159-182 3-26 (96)
23 1n10_A PHL P I, pollen allerge 24.1 2.2E+02 0.0075 22.3 6.7 102 23-141 127-239 (241)
24 1sif_A Ubiquitin; hydrophobic 23.0 60 0.002 20.8 2.7 23 110-132 6-28 (88)
25 2da1_A Alpha-fetoprotein enhan 22.8 29 0.00099 21.4 1.0 18 170-187 13-30 (70)
26 3zsj_A Galectin-3; sugar bindi 22.7 1.1E+02 0.0036 21.7 4.2 22 49-70 6-27 (138)
27 3rkq_A Homeobox protein NKX-2. 22.7 24 0.00081 20.7 0.6 17 170-186 8-24 (58)
28 2r0h_A CGL3 lectin; galectin-r 22.6 2.4E+02 0.0081 20.8 6.6 44 126-169 9-67 (164)
29 3nv1_A Galectin-9, galectin 9 22.4 1.4E+02 0.0049 21.0 4.9 22 49-70 10-31 (138)
30 2ip6_A PAPB, PEDB; immunity pr 22.3 67 0.0023 22.1 2.8 29 170-198 75-103 (112)
31 1wh7_A ZF-HD homeobox family p 21.7 30 0.001 22.4 0.9 15 170-184 23-37 (80)
32 2ns6_A Mobilization protein A; 21.3 95 0.0032 23.4 3.9 31 155-185 66-97 (185)
33 4dny_A Metalloprotease STCE; m 20.9 62 0.0021 23.1 2.5 39 107-145 45-86 (126)
34 2da4_A Hypothetical protein DK 20.4 21 0.00072 22.8 -0.0 17 170-186 14-30 (80)
No 1
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.6e-50 Score=316.93 Aligned_cols=177 Identities=44% Similarity=0.716 Sum_probs=166.8
Q ss_pred CCCCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEEEEeEEEEEEeCCCCCCCCEEEEcccccc-CCCCCCeeEEEEE
Q 028960 6 KAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNV-QQNVKPADVVFIV 84 (201)
Q Consensus 6 kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~-~~~~~~GDl~v~i 84 (201)
+|+|+.++++|||+|||+|+++++.+.+.+.|++| .+.+.++++|+||+|+++|++|+++|+|++ .+++.+|||||.|
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g-~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i 80 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHK-VRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLII 80 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTE-EEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEE
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCc-eEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEE
Confidence 48999999999999999999999999999999886 678889999999999999999999999998 5666899999999
Q ss_pred EecCCCceEEeCCceEEEEEeCHHHHhCCCcEEEeCCCCcEEEEeeCCccCCCCEEEEcCCCccCCCCCCCCccEEEEEE
Q 028960 85 DEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNLKIKFN 164 (201)
Q Consensus 85 ~v~~~~~f~r~g~dL~~~~~i~~~~al~G~~~~i~~l~G~~~~i~vp~~~~~g~~~~i~g~G~p~~~~~~~~GDL~v~~~ 164 (201)
++++|+.|+|+|+||+++++|++++|++|++++|+|+||+.+.|++|+++++|++++|+|+|||..++++.+|||||+|+
T Consensus 81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (180)
T 2q2g_A 81 QTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFD 160 (180)
T ss_dssp EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEE
T ss_pred EEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999988999999999999999999999998765567999999999
Q ss_pred EECCCCCCHHHHHHHHHHH
Q 028960 165 IKFPPSLTAEQKAGIKFLQ 183 (201)
Q Consensus 165 v~~P~~l~~~~~~~l~~~~ 183 (201)
|.||++||++|+++|++++
T Consensus 161 V~~P~~Ls~~q~~~l~~~~ 179 (180)
T 2q2g_A 161 ICFPKSLTPEQKKLIKEAL 179 (180)
T ss_dssp EECCSCCCHHHHHHHHHHC
T ss_pred EECCCCCCHHHHHHHHHhc
Confidence 9999999999999999875
No 2
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=3.4e-49 Score=311.57 Aligned_cols=176 Identities=41% Similarity=0.779 Sum_probs=162.3
Q ss_pred CCCeEEEEeeehHhHhcCcEEEEEEeEEEEc--cCCcEEEEeEEEEEEeCCCCCCCCEEEEccccccCCCCCCeeEEEEE
Q 028960 7 APPIENRLPCTLEELYKGTTKKIKISREIVD--INGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIV 84 (201)
Q Consensus 7 g~di~~~l~isL~e~~~G~~~~v~~~r~~~~--g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDl~v~i 84 (201)
++|+.++++|||+|||+|+++++.+.+.+.. |+| ++.+.++++|+||+|+++|++|+++|+|++++++.+|||||.|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g-~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i 80 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKS-IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVL 80 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSC-EEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCce-EEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEE
Confidence 5799999999999999999999999987643 555 7888899999999999999999999999998877899999999
Q ss_pred EecCCCceEEeCCceEEEEEeCHHHHhCCCcEEEeCCCCcEEEEeeCCccCCCCEEEEcCCCccCCCCCCCCccEEEEEE
Q 028960 85 DEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNLKIKFN 164 (201)
Q Consensus 85 ~v~~~~~f~r~g~dL~~~~~i~~~~al~G~~~~i~~l~G~~~~i~vp~~~~~g~~~~i~g~G~p~~~~~~~~GDL~v~~~ 164 (201)
++++|+.|+|+|+||+++++||+++|++|++++|+|+||+.+.|++|+++++|++++|+|+|||..++++.+|||||+|+
T Consensus 81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (181)
T 3agx_A 81 KDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFE 160 (181)
T ss_dssp EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEE
T ss_pred EEeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999988999999999999999999999998754567999999999
Q ss_pred EECCCCCCHHHHHHHHHHH
Q 028960 165 IKFPPSLTAEQKAGIKFLQ 183 (201)
Q Consensus 165 v~~P~~l~~~~~~~l~~~~ 183 (201)
|.||++||++|+++|++++
T Consensus 161 V~~P~~ls~~q~~~l~~~~ 179 (181)
T 3agx_A 161 VIFPERIPQTSRTVLEQVL 179 (181)
T ss_dssp EECCSCCCHHHHHHHHHHS
T ss_pred EECCCCCCHHHHHHHHHhc
Confidence 9999999999999999985
No 3
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=2.1e-47 Score=298.67 Aligned_cols=169 Identities=36% Similarity=0.715 Sum_probs=156.5
Q ss_pred CCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEEEEeEEEEEEeCCCCCCCCEEEEccccccC-CCCCCeeEEEEEEe
Q 028960 8 PPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQ-QNVKPADVVFIVDE 86 (201)
Q Consensus 8 ~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDl~v~i~v 86 (201)
+|+.++++|||+|||+|+++++.+.+. +++|+. +.++++|+||+|+.+|++|+++|+|++. +++.+|||||.|++
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~--~~~G~~--~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v 76 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--GPHGAS--EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE 76 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEE--ETTTEE--EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEe--cCCCcE--EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEE
Confidence 489999999999999999999999987 456743 7889999999999999999999999964 45589999999999
Q ss_pred cCCCceEEeCCceEEEEEeCHHHHhCCCcEEEeCCCCcEEEEeeCCccCCCCEEEEcCCCccCCCCCCCCccEEEEEEEE
Q 028960 87 KPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNLKIKFNIK 166 (201)
Q Consensus 87 ~~~~~f~r~g~dL~~~~~i~~~~al~G~~~~i~~l~G~~~~i~vp~~~~~g~~~~i~g~G~p~~~~~~~~GDL~v~~~v~ 166 (201)
++|+.|+|+|+||+++++|++++|++|++++|+|+||+.++|++|+++++|++++|+|+|||..++++.+|||||+|+|.
T Consensus 77 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~ 156 (170)
T 1c3g_A 77 KSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156 (170)
T ss_dssp CCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCB
T ss_pred ccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEE
Confidence 99999999999999999999999999999999999998799999999999999999999999876556799999999999
Q ss_pred CCCCCCHHHHHHHH
Q 028960 167 FPPSLTAEQKAGIK 180 (201)
Q Consensus 167 ~P~~l~~~~~~~l~ 180 (201)
||++||++|+++|+
T Consensus 157 ~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 157 YPISLNDAQKRAID 170 (170)
T ss_dssp CCSSCCTTHHHHTC
T ss_pred CCCCCCHHHHHhhC
Confidence 99999999998863
No 4
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=5.5e-47 Score=312.46 Aligned_cols=177 Identities=37% Similarity=0.611 Sum_probs=152.7
Q ss_pred CCCCCCCeEEEEeeehHhHhcCcEEEEEEeEEEEc----cCC----------------c---------------------
Q 028960 3 GPKKAPPIENRLPCTLEELYKGTTKKIKISREIVD----ING----------------N--------------------- 41 (201)
Q Consensus 3 ~p~kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~----g~G----------------~--------------------- 41 (201)
+|++|+|+.++|+|||+|||+|++++|.+.+.+.| |+| .
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C 86 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC 86 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence 36789999999999999999999999999998765 222 1
Q ss_pred --------------------EEEEeEEEEEEeCCCCCCCCEEEEccccccCCCCCCeeEEEEEEecCCCceEEeCCceEE
Q 028960 42 --------------------TIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIV 101 (201)
Q Consensus 42 --------------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDl~v~i~v~~~~~f~r~g~dL~~ 101 (201)
++.+.++++|+||+|+.+|++|+|+|+|++.+++.+|||||.|++++|+.|+|+|+|||+
T Consensus 87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~ 166 (248)
T 1nlt_A 87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVY 166 (248)
T ss_dssp SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEE
T ss_pred CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEE
Confidence 355678999999999999999999999999887889999999999999999999999999
Q ss_pred EEEeCHHHHhCCCcEEEeCCCCcEEEEeeCCc--cCCCCEEEEcCCCccCCCCCCCCccEEEEEEEECCCC--CCHHHHH
Q 028960 102 TRTITLGEALEGYPVRLTTLDGRSLNIPIDNV--IHPNYEETVPREGMPIQNEPSKRGNLKIKFNIKFPPS--LTAEQKA 177 (201)
Q Consensus 102 ~~~i~~~~al~G~~~~i~~l~G~~~~i~vp~~--~~~g~~~~i~g~G~p~~~~~~~~GDL~v~~~v~~P~~--l~~~~~~ 177 (201)
+++|+|++|++|++++|+|+||+.+.|++|++ +++|++++|+|+|||..+++ .+|||||+|+|.||++ ||++|++
T Consensus 167 ~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~~ 245 (248)
T 1nlt_A 167 EAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENLK 245 (248)
T ss_dssp EEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC----------
T ss_pred EEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHHH
Confidence 99999999999999999999998899999987 99999999999999986543 6899999999999999 9999998
Q ss_pred HHH
Q 028960 178 GIK 180 (201)
Q Consensus 178 ~l~ 180 (201)
+|+
T Consensus 246 ~l~ 248 (248)
T 1nlt_A 246 KLE 248 (248)
T ss_dssp ---
T ss_pred hhC
Confidence 874
No 5
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=9.6e-46 Score=315.82 Aligned_cols=178 Identities=19% Similarity=0.271 Sum_probs=165.3
Q ss_pred CCCCCCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEE-EEeEEEEEEeCCCCCCCCEEEEccccccCCCC-CCeeEE
Q 028960 4 PKKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTI-KVEEILTVDVKPGWKKGTRITFEEKGNVQQNV-KPADVV 81 (201)
Q Consensus 4 p~kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~-~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDl~ 81 (201)
|++|+|+.++++|||+|+|+|+++++.+.+.++|+.|+.. .+.++++|+||+|+++|++|+++|+|++.+++ .+||||
T Consensus 137 ~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~ 216 (329)
T 3lz8_A 137 AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLW 216 (329)
T ss_dssp CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEE
T ss_pred cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEE
Confidence 6789999999999999999999999999999999988643 33678999999999999999999999987654 799999
Q ss_pred EEEEecCCCceEEeCCceEEEEEeCHHHHhCCCcEEEeCCCCcEEEEeeCCccCCCCEEEEcCCCccCCCCCCCCccEEE
Q 028960 82 FIVDEKPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNLKI 161 (201)
Q Consensus 82 v~i~v~~~~~f~r~g~dL~~~~~i~~~~al~G~~~~i~~l~G~~~~i~vp~~~~~g~~~~i~g~G~p~~~~~~~~GDL~v 161 (201)
|+|++++|+.|+|+|+||+++++|++++|++|++++|+|+||+ ++|+||+++++|++++|+|+|||.. +.+|||||
T Consensus 217 v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v 292 (329)
T 3lz8_A 217 LVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFA 292 (329)
T ss_dssp EEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEE
T ss_pred EEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEE
Confidence 9999999999999999999999999999999999999999997 8999999999999999999999975 46999999
Q ss_pred EEEEECCCCCCHHHHHHHHHHHhh
Q 028960 162 KFNIKFPPSLTAEQKAGIKFLQLL 185 (201)
Q Consensus 162 ~~~v~~P~~l~~~~~~~l~~~~~~ 185 (201)
+|+|.||++||++|+++|++++++
T Consensus 293 ~~~V~~P~~l~~~q~~~l~~~~~~ 316 (329)
T 3lz8_A 293 VIKIVMPTKPDEKARELWQQLAAA 316 (329)
T ss_dssp EEEECCCSSCCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHhh
Confidence 999999999999999999999983
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.96 E-value=1.2e-28 Score=178.85 Aligned_cols=96 Identities=17% Similarity=0.217 Sum_probs=90.1
Q ss_pred cCCCceEEeCCceEEEEEeCHHHHhCCCcEEEeCCCCcEEEEeeCCccCCCCEEEEcCCCccCCCCCCCCccEEEEEEEE
Q 028960 87 KPHSVFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNVIHPNYEETVPREGMPIQNEPSKRGNLKIKFNIK 166 (201)
Q Consensus 87 ~~~~~f~r~g~dL~~~~~i~~~~al~G~~~~i~~l~G~~~~i~vp~~~~~g~~~~i~g~G~p~~~~~~~~GDL~v~~~v~ 166 (201)
++|+.|+|+|+||+++++|++.+|++|++++|+|+||+ +.|++|+++++|++++|+|+|||. . +.+|||||+|+|.
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g~~~G~~~rl~G~G~p~-~--~~~GDL~v~~~V~ 77 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVS-K--THTGDLFAVIKIV 77 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBC-S--SCBCCEEEEEEEC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCCcCcCeEEEECCccCCC-C--CCCcCEEEEEEEE
Confidence 68999999999999999999999999999999999995 999999999999999999999997 3 3799999999999
Q ss_pred CCCCCCHHHHHHHHHHHhhc
Q 028960 167 FPPSLTAEQKAGIKFLQLLN 186 (201)
Q Consensus 167 ~P~~l~~~~~~~l~~~~~~~ 186 (201)
||++||++|+++|++++++.
T Consensus 78 ~P~~Ls~~q~~~l~~l~~~~ 97 (109)
T 3i38_A 78 MPTKPDEKARELWQQLAAAE 97 (109)
T ss_dssp CCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHhhc
Confidence 99999999999999999873
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.95 E-value=3.8e-27 Score=174.08 Aligned_cols=95 Identities=33% Similarity=0.475 Sum_probs=85.3
Q ss_pred ceEEeCCceEEEEEeCHHHHhCCCcEEEeCCCCcEEEEeeCCc--cCCCCEEEEcCCCccCCCCCCCCccEEEEEEEECC
Q 028960 91 VFTRDGNDLIVTRTITLGEALEGYPVRLTTLDGRSLNIPIDNV--IHPNYEETVPREGMPIQNEPSKRGNLKIKFNIKFP 168 (201)
Q Consensus 91 ~f~r~g~dL~~~~~i~~~~al~G~~~~i~~l~G~~~~i~vp~~--~~~g~~~~i~g~G~p~~~~~~~~GDL~v~~~v~~P 168 (201)
.|+|+|+||+++++|++.+|++|++++|+|+||+.+.|++|++ +++|++++|+|+|||..+++ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4899999999999999999999999999999998899999988 99999999999999987643 78999999999999
Q ss_pred CC--CCHHHHHHHHHHHhhc
Q 028960 169 PS--LTAEQKAGIKFLQLLN 186 (201)
Q Consensus 169 ~~--l~~~~~~~l~~~~~~~ 186 (201)
++ |+++|+++|++++...
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~ 99 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPR 99 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCC
T ss_pred CCCCCCHHHHHHHHHHcccc
Confidence 99 9999999999998643
No 8
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.47 E-value=9.7e-14 Score=100.20 Aligned_cols=78 Identities=18% Similarity=0.212 Sum_probs=68.4
Q ss_pred CCCCCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEEEEeEEEEEEeCCCCCCCCEEEEccccccCCCCCCeeEEEEE
Q 028960 5 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIV 84 (201)
Q Consensus 5 ~kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDl~v~i 84 (201)
|+|+|+.++++|||.||+.|++++|... .| .++|+||+|+++|++++++|+|++.. +.+|||||++
T Consensus 9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl------dG-------~~~v~ip~g~~~G~~~rl~G~G~p~~-~~~GDL~v~~ 74 (109)
T 3i38_A 9 IVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAVI 74 (109)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEEE
T ss_pred EECCEEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEeeCCCcCcCeEEEECCccCCCC-CCCcCEEEEE
Confidence 5799999999999999999999998886 67 58999999999999999999999874 3789999999
Q ss_pred EecCCCceEEeC
Q 028960 85 DEKPHSVFTRDG 96 (201)
Q Consensus 85 ~v~~~~~f~r~g 96 (201)
.+.-+...+.+.
T Consensus 75 ~V~~P~~Ls~~q 86 (109)
T 3i38_A 75 KIVMPTKPDEKA 86 (109)
T ss_dssp EECCCSSCCHHH
T ss_pred EEECCCCCCHHH
Confidence 998776555443
No 9
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.44 E-value=7.9e-14 Score=102.50 Aligned_cols=82 Identities=16% Similarity=0.171 Sum_probs=67.9
Q ss_pred CCCCCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEEEEeEEEEEEeCCC--CCCCCEEEEccccccCCCC-CCeeEE
Q 028960 5 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPG--WKKGTRITFEEKGNVQQNV-KPADVV 81 (201)
Q Consensus 5 ~kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~~-~~GDl~ 81 (201)
|+|.|++++++|||.||++|++++|... .| +.++|+||+| +++|++++++|+|++..++ .+||||
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~ 71 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI 71 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT------TS------CEEEEEECTTSCCCTTCEEEETTCSCC------CCCEE
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC------CC------CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEE
Confidence 5799999999999999999999999877 67 4799999999 9999999999999986654 689999
Q ss_pred EEEEecCCCc--eEEeCCc
Q 028960 82 FIVDEKPHSV--FTRDGND 98 (201)
Q Consensus 82 v~i~v~~~~~--f~r~g~d 98 (201)
|++.+.-+.. ++.+..+
T Consensus 72 V~~~V~~P~~~~ls~~q~~ 90 (121)
T 1xao_A 72 IKFTIKFPENHFTSEENLK 90 (121)
T ss_dssp EEEEEECCCTTCSCHHHHH
T ss_pred EEEEEECCCCCCCCHHHHH
Confidence 9999987665 5544433
No 10
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=99.24 E-value=2.1e-11 Score=95.45 Aligned_cols=78 Identities=15% Similarity=0.154 Sum_probs=68.1
Q ss_pred CCCCCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEEEEeEEEEEEeCCCCCCCCEEEEccccccCCC--CCCeeEEE
Q 028960 5 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQN--VKPADVVF 82 (201)
Q Consensus 5 ~kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDl~v 82 (201)
|+|+|++++++|||.||++|++++|... +| +.++|.+|+|+++|+.++++|+|++..+ +.+|||||
T Consensus 90 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V 157 (181)
T 3agx_A 90 RDGSDVIYPARISLREALCGCTVNVPTL------DG------RTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLII 157 (181)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT------TS------CEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEE
T ss_pred eeCCcEEEEEEcCHHHHhCCCEEEeECC------CC------CEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEE
Confidence 4699999999999999999999999887 77 4789999999999999999999998654 35899999
Q ss_pred EEEecCCCceEE
Q 028960 83 IVDEKPHSVFTR 94 (201)
Q Consensus 83 ~i~v~~~~~f~r 94 (201)
++.+.-+..++.
T Consensus 158 ~~~V~~P~~ls~ 169 (181)
T 3agx_A 158 EFEVIFPERIPQ 169 (181)
T ss_dssp EEEEECCSCCCH
T ss_pred EEEEECCCCCCH
Confidence 999987665443
No 11
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=99.23 E-value=2.5e-11 Score=94.92 Aligned_cols=77 Identities=16% Similarity=0.120 Sum_probs=67.6
Q ss_pred CCCCCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEEEEeEEEEEEeCCCCCCCCEEEEccccccCCC--CCCeeEEE
Q 028960 5 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQN--VKPADVVF 82 (201)
Q Consensus 5 ~kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDl~v 82 (201)
|+|+|++++++|||.||++|++++|... +| +.++|.+|+|+++|++++++|+|++... +.+|||||
T Consensus 90 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V 157 (180)
T 2q2g_A 90 RDDCHLIMKVTIPLVRALTGFTCPVTTL------DN------RNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLIL 157 (180)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT------TC------CEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEE
T ss_pred EcCCEEEEEEEcCHHHHhCCCEEEeeCC------CC------CEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEE
Confidence 4699999999999999999999999887 77 4789999999999999999999998653 35899999
Q ss_pred EEEecCCCceE
Q 028960 83 IVDEKPHSVFT 93 (201)
Q Consensus 83 ~i~v~~~~~f~ 93 (201)
++.+.-+..++
T Consensus 158 ~~~V~~P~~Ls 168 (180)
T 2q2g_A 158 EFDICFPKSLT 168 (180)
T ss_dssp EEEEECCSCCC
T ss_pred EEEEECCCCCC
Confidence 99998665544
No 12
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=99.22 E-value=1.6e-11 Score=95.21 Aligned_cols=77 Identities=13% Similarity=0.184 Sum_probs=67.5
Q ss_pred CCCCCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEEEEeEEEEEEeCCCCCCCCEEEEccccccCCCC--CCeeEEE
Q 028960 5 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNV--KPADVVF 82 (201)
Q Consensus 5 ~kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~--~~GDl~v 82 (201)
|+|.|++++++|||.||++|++++|... +| +.++|++|+|+++|+.++++|+|++..++ .+|||||
T Consensus 84 R~G~DL~~~~~Isl~eAllG~~~~v~tl------dG------~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V 151 (170)
T 1c3g_A 84 RDGDDLIYTLPLSFKESLLGFSKTIQTI------DG------RTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIV 151 (170)
T ss_dssp EETTEEEEEECCBHHHHHHCEEEEEECS------SS------CEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEE
T ss_pred EeCCcEeEEEEcCHHHHhCCCeEEeeCC------CC------CEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEE
Confidence 4699999999999999999999999887 67 46899999999999999999999986533 5799999
Q ss_pred EEEecCCCceE
Q 028960 83 IVDEKPHSVFT 93 (201)
Q Consensus 83 ~i~v~~~~~f~ 93 (201)
++.+.-++.++
T Consensus 152 ~~~V~~P~~Ls 162 (170)
T 1c3g_A 152 KYKVDYPISLN 162 (170)
T ss_dssp EECCBCCSSCC
T ss_pred EEEEECCCCCC
Confidence 99998666544
No 13
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.22 E-value=1.5e-11 Score=100.84 Aligned_cols=82 Identities=16% Similarity=0.184 Sum_probs=66.8
Q ss_pred CCCCCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEEEEeEEEEEEeCCC--CCCCCEEEEccccccCCCC-CCeeEE
Q 028960 5 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPG--WKKGTRITFEEKGNVQQNV-KPADVV 81 (201)
Q Consensus 5 ~kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~~-~~GDl~ 81 (201)
|+|+||+++++|||.||++|.+++|+.. +| +.++|+||+| +++|+.++++|+|++.... .+||||
T Consensus 159 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~ 226 (248)
T 1nlt_A 159 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI 226 (248)
T ss_dssp EETTEEEEEEEEEHHHHHHCBCCEEECS------SS------CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEE
T ss_pred eeCCEEEEEEEeCHHHHhcCCEEEEeCC------CC------CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEE
Confidence 5699999999999999999999999887 77 4699999999 9999999999999986544 689999
Q ss_pred EEEEecCCCc--eEEeCCc
Q 028960 82 FIVDEKPHSV--FTRDGND 98 (201)
Q Consensus 82 v~i~v~~~~~--f~r~g~d 98 (201)
|+|.|.-+.. ++.+..+
T Consensus 227 V~~~V~~P~~~~Ls~~q~~ 245 (248)
T 1nlt_A 227 IKFTIKDPENHFTSEENLK 245 (248)
T ss_dssp EEEEEECCC----------
T ss_pred EEEEEECCCCCCCCHHHHH
Confidence 9999987665 5544433
No 14
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.08 E-value=1.8e-10 Score=97.94 Aligned_cols=77 Identities=18% Similarity=0.213 Sum_probs=67.6
Q ss_pred CCCCCeEEEEeeehHhHhcCcEEEEEEeEEEEccCCcEEEEeEEEEEEeCCCCCCCCEEEEccccccCCCCCCeeEEEEE
Q 028960 5 KKAPPIENRLPCTLEELYKGTTKKIKISREIVDINGNTIKVEEILTVDVKPGWKKGTRITFEEKGNVQQNVKPADVVFIV 84 (201)
Q Consensus 5 ~kg~di~~~l~isL~e~~~G~~~~v~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDl~v~i 84 (201)
|+|.|+.++++|||.||++|++++|+.. .| .++|+||+|+++|++++++|+|++.. +.+|||||+|
T Consensus 229 R~G~DL~~~~~Isl~eAllG~~v~VptL------dG-------~v~l~ip~gt~~g~~~rl~G~GmP~~-~~rGDL~v~~ 294 (329)
T 3lz8_A 229 IVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAVI 294 (329)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEEE
T ss_pred EcCCcEEEEEECCHHHHcCCCeEEEECC------CC-------CEEEEECCCCCCCCEEEEcCCCCCCC-CCCCCEEEEE
Confidence 4689999999999999999999999888 78 47999999999999999999999865 4689999999
Q ss_pred EecCCCceEEe
Q 028960 85 DEKPHSVFTRD 95 (201)
Q Consensus 85 ~v~~~~~f~r~ 95 (201)
.|.-++..+.+
T Consensus 295 ~V~~P~~l~~~ 305 (329)
T 3lz8_A 295 KIVMPTKPDEK 305 (329)
T ss_dssp EECCCSSCCHH
T ss_pred EEECCCCCCHH
Confidence 99866655433
No 15
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.62 E-value=4.9e-05 Score=53.67 Aligned_cols=31 Identities=13% Similarity=0.108 Sum_probs=29.2
Q ss_pred CCCeEEEEeeehHhHhcCcEEEEEEeEEEEc
Q 028960 7 APPIENRLPCTLEELYKGTTKKIKISREIVD 37 (201)
Q Consensus 7 g~di~~~l~isL~e~~~G~~~~v~~~r~~~~ 37 (201)
|.|+.++|+|||+|||+|.+++|.+.+.+.|
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C 31 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTC 31 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEEC
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeEC
Confidence 6789999999999999999999999999887
No 16
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=44.54 E-value=15 Score=24.54 Aligned_cols=23 Identities=22% Similarity=0.520 Sum_probs=20.5
Q ss_pred EEECCCCCCHHHHHHHHHHHhhc
Q 028960 164 NIKFPPSLTAEQKAGIKFLQLLN 186 (201)
Q Consensus 164 ~v~~P~~l~~~~~~~l~~~~~~~ 186 (201)
.+.||..|+..|+..+-++++.-
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA~~~ 57 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIAEEH 57 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHT
T ss_pred EEEcCCCCCHHHHHHHHHHHHHc
Confidence 68899999999999999998754
No 17
>2jnz_A PHL P 3 allergen; timothy grass pollen; NMR {Phleum pratense}
Probab=43.33 E-value=78 Score=21.82 Aligned_cols=84 Identities=12% Similarity=0.121 Sum_probs=49.8
Q ss_pred EEEEEEeCCCCCCCCEEE-EccccccCCCCCCeeEEEEEEecC--CCce---EEeCCceEEEEEeCHHHHhCC-CcEEEe
Q 028960 47 EILTVDVKPGWKKGTRIT-FEEKGNVQQNVKPADVVFIVDEKP--HSVF---TRDGNDLIVTRTITLGEALEG-YPVRLT 119 (201)
Q Consensus 47 ~~~~V~Ip~G~~~G~~i~-l~g~G~~~~~~~~GDl~v~i~v~~--~~~f---~r~g~dL~~~~~i~~~~al~G-~~~~i~ 119 (201)
..++++|..|-.+..-.. +...|. .||+ ..++++. ...| +|. ...+.. .- ...|.| .+++|.
T Consensus 13 ~~v~f~V~~~snp~~l~VlV~nv~G------~GdI-~~V~Ik~~~~~~W~~M~rn-Ga~W~~-~s--~~~L~GplSfRvt 81 (108)
T 2jnz_A 13 VQVTFTVQKGSDPKKLVLDIKYTRP------GDSL-AEVELRQHGSEEWEPLTKK-GNVWEV-KS--SKPLVGPFNFRFM 81 (108)
T ss_dssp CEEEEEECTTCCSSEEEEEEEEEBT------TBCE-EEEEEECTTCCCCEECEEE-TTEEEE-EC--SSCCCSSEEEEEE
T ss_pred ccEEEEEecCCCccEEEEEEEEeCC------CCCE-EEEEEEeCCCCcEeEcccc-CCEeEe-CC--CCCCCCCEEEEEE
Confidence 578888888877665533 333332 3664 6666664 2223 455 444432 11 123555 478888
Q ss_pred CCCCcEEEEe--eCCccCCCCEEE
Q 028960 120 TLDGRSLNIP--IDNVIHPNYEET 141 (201)
Q Consensus 120 ~l~G~~~~i~--vp~~~~~g~~~~ 141 (201)
+-||+.+... +|+.=++|+.+.
T Consensus 82 ts~G~~~va~nViPa~W~~Gqty~ 105 (108)
T 2jnz_A 82 SKGGMRNVFDEVIPTAFSIGKTYK 105 (108)
T ss_dssp ETTTEEEEEEEEECSSCCTTCEEC
T ss_pred EcCCcEEEECeEECCCCCCCCEEe
Confidence 9999866554 688888888763
No 18
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=35.52 E-value=1.3e+02 Score=23.82 Aligned_cols=103 Identities=13% Similarity=0.213 Sum_probs=56.6
Q ss_pred cCcEEEEEEeEEEEcc-CCcEEEEeEEEEEEeCCCCCCCCE-EEEccccccCCCCCCeeEEEEEEecCCC--ce---EEe
Q 028960 23 KGTTKKIKISREIVDI-NGNTIKVEEILTVDVKPGWKKGTR-ITFEEKGNVQQNVKPADVVFIVDEKPHS--VF---TRD 95 (201)
Q Consensus 23 ~G~~~~v~~~r~~~~g-~G~~~~~~~~~~V~Ip~G~~~G~~-i~l~g~G~~~~~~~~GDl~v~i~v~~~~--~f---~r~ 95 (201)
....+.|.+.| +.|. .| ...+++.|..|...... +.+.+.+. .+| +..++++... .| +|.
T Consensus 127 ~~Gii~V~yrr-V~C~~~g-----g~ni~f~v~~Gs~~~~~avlv~n~~g------~g~-V~~V~ik~~~~~~W~~m~r~ 193 (245)
T 2hcz_X 127 HCGIMDVEFRR-VRCKYPA-----GQKIVFHIEKGCNPNYLAVLVKYVAD------DGD-IVLMEIQDKLSAEWKPMKLS 193 (245)
T ss_dssp TTCCEEEEEEE-ECCCCST-----TCCCEEEECCCCSSSCCCEEEECCCT------TCC-EEEEEBCCSSSCSCBCCEEE
T ss_pred cCCEEEEEEEE-EecCCCC-----CCcEEEEEcCCCCcceEEEEEEecCC------CCC-EEEEEEEeCCCCceeECccC
Confidence 34567777765 3442 21 02577777776554432 33444331 244 4777887653 33 333
Q ss_pred CCceEEEEEeCHHHHhCC-CcEEEeCCCCcEEEEe--eCCccCCCCEEE
Q 028960 96 GNDLIVTRTITLGEALEG-YPVRLTTLDGRSLNIP--IDNVIHPNYEET 141 (201)
Q Consensus 96 g~dL~~~~~i~~~~al~G-~~~~i~~l~G~~~~i~--vp~~~~~g~~~~ 141 (201)
-...+. ++-...|.| .+++|.+.+|+.+... +|+.-++|+.+.
T Consensus 194 ~G~~W~---~~~~~~l~gpls~RvT~~~G~~v~~~nViP~~w~~g~ty~ 239 (245)
T 2hcz_X 194 WGAIWR---MDTAKALKGPFSIRLTSESGKKVIAKDVIPANWRPDAVYT 239 (245)
T ss_dssp ETTEEE---CSCCSSCCSSCCEEEEETTSCEEEESCSCCSSCCTTCEEE
T ss_pred CCCEEE---ECCCCCCCCCEEEEEEEeCCcEEEEeeeecCCCCCCCEEe
Confidence 222232 111111334 5899999999987766 577778888774
No 19
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=34.70 E-value=1.3e+02 Score=21.72 Aligned_cols=66 Identities=9% Similarity=-0.029 Sum_probs=48.1
Q ss_pred CCCcEEEeCCCCcEEEEeeCC--ccCCCCEEEEcCCCccCCCCCCCCccEEEEEEEECCCC---CCHHHHHHHHHHHh
Q 028960 112 EGYPVRLTTLDGRSLNIPIDN--VIHPNYEETVPREGMPIQNEPSKRGNLKIKFNIKFPPS---LTAEQKAGIKFLQL 184 (201)
Q Consensus 112 ~G~~~~i~~l~G~~~~i~vp~--~~~~g~~~~i~g~G~p~~~~~~~~GDL~v~~~v~~P~~---l~~~~~~~l~~~~~ 184 (201)
.|.++.+.+.||..++|..++ ....+..+-+-|+-- ..+.+-..--+.|..+ ++.+.-+.+-++..
T Consensus 58 ~G~~~~l~s~Dg~~VtV~l~~pL~~~~~~~VEViG~V~-------~~~tI~~~~~~~fGd~~~~fD~~~yn~lv~l~~ 128 (142)
T 2pi2_E 58 TGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVGRVT-------AKATILCTSYVQFKEDSHPFDLGLYNEAVKIIH 128 (142)
T ss_dssp TSSEEEEECTTSCEEEEECSSCCSSCCCSEEEEEEEEC-------TTSCEEEEEEEECCCSSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEeCCCCCccCCCEEEEEEEEC-------CCCcEEEEEEEecCCCccccCHHHHHHHHHHHH
Confidence 578899999999889998865 345677888887742 2466777778899887 77766665555543
No 20
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=29.19 E-value=76 Score=22.46 Aligned_cols=44 Identities=11% Similarity=0.142 Sum_probs=30.3
Q ss_pred EEEeeCCccCCCCEEEEcCCCccCCCC--------CCCCccEEEEEEEECCC
Q 028960 126 LNIPIDNVIHPNYEETVPREGMPIQNE--------PSKRGNLKIKFNIKFPP 169 (201)
Q Consensus 126 ~~i~vp~~~~~g~~~~i~g~G~p~~~~--------~~~~GDL~v~~~v~~P~ 169 (201)
..-.+|.+.++|+.++|.|.=.+..++ .+...|+-++|++.|.+
T Consensus 8 ~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~ 59 (138)
T 3zxf_A 8 HKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 (138)
T ss_dssp EEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTT
T ss_pred EEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCC
Confidence 455678888999999998863322211 12356999999999965
No 21
>2wkk_A Galectin-2; sugar-binding protein, secreted, cell WALL, sugar binding, sugar binding protein, beta-galactoside binding lectin, fruiting BODY; HET: GAL NAG FUC; 1.50A {Coprinopsis cinerea} PDB: 1ulc_A* 1ul9_A* 1ule_A* 1ulf_A* 1ulg_A* 1uld_A*
Probab=28.12 E-value=1.4e+02 Score=21.53 Aligned_cols=43 Identities=12% Similarity=0.187 Sum_probs=28.8
Q ss_pred EEeeCCccCCCCEEEEcCCCccC-CCC-----CCCCccEEEEEEEECCC
Q 028960 127 NIPIDNVIHPNYEETVPREGMPI-QNE-----PSKRGNLKIKFNIKFPP 169 (201)
Q Consensus 127 ~i~vp~~~~~g~~~~i~g~G~p~-~~~-----~~~~GDL~v~~~v~~P~ 169 (201)
.+.+|.+.++|+.++|.|.=.+. .++ ....+|+.++|++.|.+
T Consensus 10 ~~~ip~gl~~G~~i~I~G~~~~~~a~rF~INl~~g~~dialHfnpRf~~ 58 (150)
T 2wkk_A 10 QVKLQNDFKPESVAAIRSSAFNSKGGTTVFNFLSAGENILLHISIRPGE 58 (150)
T ss_dssp EEEEEEEECTTCEEEEECSCCCTTCCCEEEEEECTTCCEEEEEEEETTT
T ss_pred ceecCCCCcCCCEEEEEEEECCCCCCEEEEEEecCCCCEEEEEeeecCC
Confidence 55677788999999999852221 111 01234999999999874
No 22
>1mli_A Muconolactone isomerase; intramolecular oxidoreductase; 3.30A {Pseudomonas putida} SCOP: d.58.4.1
Probab=26.87 E-value=80 Score=21.34 Aligned_cols=24 Identities=17% Similarity=0.405 Sum_probs=19.6
Q ss_pred EEEEEEEECCCCCCHHHHHHHHHH
Q 028960 159 LKIKFNIKFPPSLTAEQKAGIKFL 182 (201)
Q Consensus 159 L~v~~~v~~P~~l~~~~~~~l~~~ 182 (201)
..|++.|.+|..+++++...++.-
T Consensus 3 FlV~m~V~~P~~~~~~~~~~~~a~ 26 (96)
T 1mli_A 3 FHVKMTVKLPVDMDPAKATQLKAD 26 (96)
T ss_pred EEEEEEeeCCCCCCHHHHHHHHHH
Confidence 468899999999999997776543
No 23
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=24.05 E-value=2.2e+02 Score=22.33 Aligned_cols=102 Identities=19% Similarity=0.184 Sum_probs=55.6
Q ss_pred cCcEEEEEEeEEEEcc-C-CcEEEEeEEEEEEeCCCCCCCCEEE-EccccccCCCCCCeeEEEEEEecCC--CceEE---
Q 028960 23 KGTTKKIKISREIVDI-N-GNTIKVEEILTVDVKPGWKKGTRIT-FEEKGNVQQNVKPADVVFIVDEKPH--SVFTR--- 94 (201)
Q Consensus 23 ~G~~~~v~~~r~~~~g-~-G~~~~~~~~~~V~Ip~G~~~G~~i~-l~g~G~~~~~~~~GDl~v~i~v~~~--~~f~r--- 94 (201)
....+.|.+.| +.|. . | ..+++.|..|........ +.+.+. .||+ ..++++.. ..|..
T Consensus 127 ~~Gii~V~yrr-V~C~~~gg------~~i~f~v~~Gs~~~~~~vlv~n~~g------~g~V-~~V~ik~~~~~~W~~m~r 192 (241)
T 1n10_A 127 SAGELELQFRR-VKCKYPEG------TKVTFHVEKGSNPNYLALLVKYVNG------DGDV-VAVDIKEKGKDKWIELKE 192 (241)
T ss_dssp TTCSEEEEEEE-CCCCCCTT------CCCEEEECTTCBTTEEEEEEECCCC------SSCE-EEEEEEETTCCCCEECBC
T ss_pred cCCEEEEEEEE-EeCCCCCC------CceEEEEcCCCCcceEEEEEEecCC------CCCE-EEEEEEeCCCCCeEECcc
Confidence 34567787754 4452 2 2 257778877766554433 333331 2453 66666654 23443
Q ss_pred eCCceEEEEEeCHHHHhCC-CcEEEeCCCCcEEEEe--eCCccCCCCEEE
Q 028960 95 DGNDLIVTRTITLGEALEG-YPVRLTTLDGRSLNIP--IDNVIHPNYEET 141 (201)
Q Consensus 95 ~g~dL~~~~~i~~~~al~G-~~~~i~~l~G~~~~i~--vp~~~~~g~~~~ 141 (201)
.-...+..-.- ..|.| .+++|.+.+|+.+... +|+.-+.|+.+.
T Consensus 193 ~wG~~W~~~~~---~~l~gpls~RvT~~~G~~v~~~nViP~~w~~g~ty~ 239 (241)
T 1n10_A 193 SWGAIWRIDTP---DKLTGPFTVRYTTEGGTKTEAEDVIPEGWKADTSYE 239 (241)
T ss_dssp CTTTCEEEECS---SCCCSCEEEEEEESSSCEEEEEEEECSSCCSSEEEE
T ss_pred CcCcEEEeCCC---CCCCCCEEEEEEEeCCcEEEEccccCCCCCCCCEEe
Confidence 22233332111 12334 4788899999876554 677778887763
No 24
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=22.97 E-value=60 Score=20.82 Aligned_cols=23 Identities=22% Similarity=0.573 Sum_probs=16.8
Q ss_pred HhCCCcEEEeCCCCcEEEEeeCC
Q 028960 110 ALEGYPVRLTTLDGRSLNIPIDN 132 (201)
Q Consensus 110 al~G~~~~i~~l~G~~~~i~vp~ 132 (201)
.+.|..+.+.+++|+.+.+.+++
T Consensus 6 ~~~~~~i~v~~~~G~~~~l~v~~ 28 (88)
T 1sif_A 6 HLQGLQLFIKTLTGKTFTVEMEP 28 (88)
T ss_dssp ----CEEEEEETTSCEEEEECCT
T ss_pred cccceEEEEEeCCCCEEEEEECC
Confidence 46788999999999988888875
No 25
>2da1_A Alpha-fetoprotein enhancer binding protein; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics; NMR {Homo sapiens}
Probab=22.79 E-value=29 Score=21.40 Aligned_cols=18 Identities=17% Similarity=0.139 Sum_probs=15.1
Q ss_pred CCCHHHHHHHHHHHhhcC
Q 028960 170 SLTAEQKAGIKFLQLLNR 187 (201)
Q Consensus 170 ~l~~~~~~~l~~~~~~~~ 187 (201)
.++.+|...|++..+.+.
T Consensus 13 ~ft~~q~~~Le~~F~~~~ 30 (70)
T 2da1_A 13 RITDDQLRVLRQYFDINN 30 (70)
T ss_dssp CCCHHHHHHHHHHHHHCS
T ss_pred CCCHHHHHHHHHHHHHCC
Confidence 489999999999888764
No 26
>3zsj_A Galectin-3; sugar binding protein; HET: LAT; 0.86A {Homo sapiens} SCOP: b.29.1.3 PDB: 2nmn_A* 2nn8_A* 2nmo_A* 3t1m_A* 3t1l_A* 1kjl_A* 1kjr_A* 1a3k_A* 2xg3_A* 3zsk_A 3zsl_A 3zsm_A 3ayc_A* 3aya_A* 3ayd_A* 3aye_A*
Probab=22.74 E-value=1.1e+02 Score=21.69 Aligned_cols=22 Identities=14% Similarity=0.012 Sum_probs=18.7
Q ss_pred EEEEeCCCCCCCCEEEEccccc
Q 028960 49 LTVDVKPGWKKGTRITFEEKGN 70 (201)
Q Consensus 49 ~~V~Ip~G~~~G~~i~l~g~G~ 70 (201)
++-.||.|+.+|+.|++.|.-.
T Consensus 6 ~~~~i~~gl~~G~~i~I~G~v~ 27 (138)
T 3zsj_A 6 YNLPLPGGVVPRMLITILGTVK 27 (138)
T ss_dssp EEEECTTCCCTTEEEEEEEEEC
T ss_pred EEeecCCCCCCCCEEEEEEEEC
Confidence 4568999999999999998753
No 27
>3rkq_A Homeobox protein NKX-2.5; helix-turn-helix, DNA binding, nucleus, transcription-DNA CO; 1.70A {Homo sapiens}
Probab=22.71 E-value=24 Score=20.72 Aligned_cols=17 Identities=6% Similarity=-0.150 Sum_probs=13.1
Q ss_pred CCCHHHHHHHHHHHhhc
Q 028960 170 SLTAEQKAGIKFLQLLN 186 (201)
Q Consensus 170 ~l~~~~~~~l~~~~~~~ 186 (201)
.++.+|...|+...+.+
T Consensus 8 ~~t~~q~~~Le~~F~~~ 24 (58)
T 3rkq_A 8 LFSQAQVYELERRFKQQ 24 (58)
T ss_dssp CCCHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHHHc
Confidence 47888888888877654
No 28
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A*
Probab=22.56 E-value=2.4e+02 Score=20.84 Aligned_cols=44 Identities=7% Similarity=0.183 Sum_probs=31.3
Q ss_pred EEEeeCCccCCCCEEEEcCCCccCC-------CCC--------CCCccEEEEEEEECCC
Q 028960 126 LNIPIDNVIHPNYEETVPREGMPIQ-------NEP--------SKRGNLKIKFNIKFPP 169 (201)
Q Consensus 126 ~~i~vp~~~~~g~~~~i~g~G~p~~-------~~~--------~~~GDL~v~~~v~~P~ 169 (201)
-++.++.+.++|+.+.|.|.-++.. .+. ...+|+.++|++.|.+
T Consensus 9 ~~~~L~~~L~~G~~i~I~G~v~~~~~~~~~~~~~a~rF~INl~~g~~DIalHfNPRF~e 67 (164)
T 2r0h_A 9 STVDLSEPLKDNGIIVFQSDKLDLEPSPNLGPTGIDNTNVNLINAKGDVLLHIGIRRRE 67 (164)
T ss_dssp EEEECSSCCCTTCEEEEECSCCCCSCCSCCCTTSSCCEEEEEEETTSCEEEEEEEETTT
T ss_pred eeEECCCCccCCCEEEEEEEecCcccccccCCCCCCeEEEEeeeCCCCEEEEEeeccCC
Confidence 3567788899999999999865410 001 1235999999999875
No 29
>3nv1_A Galectin-9, galectin 9 short isoform variant; sugar binding, sugar binding protein; 1.50A {Homo sapiens} SCOP: b.29.1.0 PDB: 3nv2_A* 3nv3_A* 3nv4_A*
Probab=22.40 E-value=1.4e+02 Score=20.99 Aligned_cols=22 Identities=9% Similarity=0.036 Sum_probs=18.5
Q ss_pred EEEEeCCCCCCCCEEEEccccc
Q 028960 49 LTVDVKPGWKKGTRITFEEKGN 70 (201)
Q Consensus 49 ~~V~Ip~G~~~G~~i~l~g~G~ 70 (201)
++-.||.|+..|+.+++.|.-.
T Consensus 10 ~~~~i~~gl~~G~~i~I~G~v~ 31 (138)
T 3nv1_A 10 FITTILGGLYPSKSILLSGTVL 31 (138)
T ss_dssp EEEECTTCCCTTCEEEEEEEEC
T ss_pred EEeeCCCCCCCCCEEEEEEEEC
Confidence 4567899999999999999753
No 30
>2ip6_A PAPB, PEDB; immunity protein to the pediocin PP-1, antimicrobial protein; 1.35A {Pediococcus pentosaceus}
Probab=22.33 E-value=67 Score=22.11 Aligned_cols=29 Identities=21% Similarity=0.263 Sum_probs=17.4
Q ss_pred CCCHHHHHHHHHHHhhcCCCCcchhcccc
Q 028960 170 SLTAEQKAGIKFLQLLNRCLPCFGLFRSW 198 (201)
Q Consensus 170 ~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 198 (201)
.|++++.++|++|.+++.+...|+-+-.|
T Consensus 75 hl~~eE~~~L~~I~~ia~S~~~WGglN~l 103 (112)
T 2ip6_A 75 HFTAEENKVLAAINELAHSQKGWGEFNML 103 (112)
T ss_dssp CCCHHHHHHHHHHHHHTTC----------
T ss_pred cCCHHHHHHHHHHHHHhcccccccccccc
Confidence 58999999999999998877666666555
No 31
>1wh7_A ZF-HD homeobox family protein; homeobox domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.4.1.1
Probab=21.68 E-value=30 Score=22.38 Aligned_cols=15 Identities=33% Similarity=0.279 Sum_probs=12.1
Q ss_pred CCCHHHHHHHHHHHh
Q 028960 170 SLTAEQKAGIKFLQL 184 (201)
Q Consensus 170 ~l~~~~~~~l~~~~~ 184 (201)
.++.+|+..|+.+..
T Consensus 23 ~ft~~Ql~~Le~F~~ 37 (80)
T 1wh7_A 23 KFTAEQKEKMLAFAE 37 (80)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 489999999996554
No 32
>2ns6_A Mobilization protein A; nickase, 5-strand antiparallel beta sheet, metalloenzyme, hydrolase; 2.10A {Pseudomonas aeruginosa}
Probab=21.27 E-value=95 Score=23.39 Aligned_cols=31 Identities=23% Similarity=0.218 Sum_probs=23.9
Q ss_pred CCccEEEEEEEECCCCCCHHHH-HHHHHHHhh
Q 028960 155 KRGNLKIKFNIKFPPSLTAEQK-AGIKFLQLL 185 (201)
Q Consensus 155 ~~GDL~v~~~v~~P~~l~~~~~-~~l~~~~~~ 185 (201)
..+-|.=+|.|.+|..||.+|. ++++++.+.
T Consensus 66 ~na~lare~~iALP~EL~~eq~~~L~~~f~~~ 97 (185)
T 2ns6_A 66 ANGRLFKEVEFALPVELTLDQQKALASEFAQH 97 (185)
T ss_dssp TTSCCEEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred cCCeEEEEEEEECCccCCHHHHHHHHHHHHHH
Confidence 3578999999999999997665 455666554
No 33
>4dny_A Metalloprotease STCE; metzincin, bacterial zinc metalloprotease, O-linked glycoPro hydrolase; 1.61A {Escherichia coli}
Probab=20.92 E-value=62 Score=23.07 Aligned_cols=39 Identities=15% Similarity=0.100 Sum_probs=25.9
Q ss_pred HHHHhCCC-cEEEeCCCCcEEE-EeeCCccC-CCCEEEEcCC
Q 028960 107 LGEALEGY-PVRLTTLDGRSLN-IPIDNVIH-PNYEETVPRE 145 (201)
Q Consensus 107 ~~~al~G~-~~~i~~l~G~~~~-i~vp~~~~-~g~~~~i~g~ 145 (201)
+.++|... .+.|.|-||++++ |.+|.... .|..+++...
T Consensus 45 l~~~L~~~d~V~v~t~DG~W~rdI~LP~~~~~~gK~V~~~S~ 86 (126)
T 4dny_A 45 IHSHLTNNALVEIHTANGRWVRDIYLPQGPDLEGKMVRFVSS 86 (126)
T ss_dssp HHHHHTSCSEEEEEEETTBCCSEEECCCSGGGTTCEEEEEEE
T ss_pred HHHHhccCCEEEEEecCCceEcceECCCCcccCCCEEEEEEe
Confidence 44556653 5778888887643 77776554 6777777743
No 34
>2da4_A Hypothetical protein DKFZP686K21156; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.37 E-value=21 Score=22.79 Aligned_cols=17 Identities=12% Similarity=-0.050 Sum_probs=14.4
Q ss_pred CCCHHHHHHHHHHHhhc
Q 028960 170 SLTAEQKAGIKFLQLLN 186 (201)
Q Consensus 170 ~l~~~~~~~l~~~~~~~ 186 (201)
.++.+|...|++..+.+
T Consensus 14 ~ft~~Q~~~Le~~F~~~ 30 (80)
T 2da4_A 14 QFSDRDLATLKKYWDNG 30 (80)
T ss_dssp CCCHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 48999999999888766
Done!