Your job contains 1 sequence.
>028963
MATSKCSSYEKYEIRKRNPNPKSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPV
FFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNT
RLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKN
LAYGFAYLFDCERLEAGLFGP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028963
(201 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2166958 - symbol:NIC2 "nicotinamidase 2" speci... 753 1.2e-74 1
TAIR|locus:2166948 - symbol:NIC3 "nicotinamidase 3" speci... 740 2.8e-73 1
TIGR_CMR|BA_2371 - symbol:BA_2371 "isochorismatase" speci... 199 6.0e-16 1
UNIPROTKB|P0ADI4 - symbol:entB species:83333 "Escherichia... 191 4.2e-15 1
TIGR_CMR|GSU_0569 - symbol:GSU_0569 "isochorismatase fami... 183 3.0e-14 1
TIGR_CMR|CHY_0679 - symbol:CHY_0679 "isochorismatase fami... 168 1.2e-12 1
TIGR_CMR|BA_3315 - symbol:BA_3315 "isochorismatase family... 164 3.1e-12 1
TIGR_CMR|BA_2963 - symbol:BA_2963 "isochorismatase family... 149 1.2e-10 1
TIGR_CMR|VC_0771 - symbol:VC_0771 "vibriobactin-specific ... 152 1.5e-10 1
TAIR|locus:2094927 - symbol:AT3G16190 species:3702 "Arabi... 147 2.0e-10 1
TIGR_CMR|SO_4590 - symbol:SO_4590 "isochorismatase family... 139 1.4e-09 1
TIGR_CMR|SPO_1471 - symbol:SPO_1471 "isochorismatase fami... 134 1.9e-09 2
UNIPROTKB|P0ADI7 - symbol:yecD "predicted hydrolase" spec... 137 2.2e-09 1
TIGR_CMR|BA_0311 - symbol:BA_0311 "isochorismatase family... 137 2.2e-09 1
UNIPROTKB|P75897 - symbol:rutB "peroxyureidoacrylate / ur... 127 4.2e-09 2
TIGR_CMR|BA_1382 - symbol:BA_1382 "isochorismatase family... 134 5.3e-09 1
TIGR_CMR|SPO_1828 - symbol:SPO_1828 "isochorismatase fami... 122 1.2e-07 2
ASPGD|ASPL0000002190 - symbol:AN6124 species:162425 "Emer... 127 1.8e-07 2
UNIPROTKB|C5NU54 - symbol:sttH "Streptothricin hydrolase"... 133 2.5e-07 1
TIGR_CMR|CPS_0771 - symbol:CPS_0771 "isochorismatase fami... 134 3.6e-07 1
TIGR_CMR|BA_0016 - symbol:BA_0016 "isochorismatase family... 116 1.0e-05 1
DICTYBASE|DDB_G0271336 - symbol:DDB_G0271336 species:4468... 115 1.8e-05 1
TIGR_CMR|GSU_2290 - symbol:GSU_2290 "pyrazinamidase/nicot... 114 3.9e-05 1
UNIPROTKB|Q1MW86 - symbol:sttH "Streptothricin hydrolase"... 114 0.00010 1
TIGR_CMR|GSU_2583 - symbol:GSU_2583 "isochorismatase fami... 111 0.00011 1
TIGR_CMR|SPO_3572 - symbol:SPO_3572 "isochorismatase fami... 106 0.00027 1
TIGR_CMR|GSU_1002 - symbol:GSU_1002 "isochorismatase fami... 99 0.00029 2
ZFIN|ZDB-GENE-070518-1 - symbol:isoc2 "isochorismatase do... 79 0.00047 2
TIGR_CMR|BA_4482 - symbol:BA_4482 "isochorismatase family... 81 0.00061 2
UNIPROTKB|G4MQX0 - symbol:MGG_04726 "Isochorismatase fami... 109 0.00062 2
>TAIR|locus:2166958 [details] [associations]
symbol:NIC2 "nicotinamidase 2" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008152
"metabolic process" evidence=IEA;ISS] [GO:0008936 "nicotinamidase
activity" evidence=IDA] [GO:0019674 "NAD metabolic process"
evidence=IMP] InterPro:IPR000868 Pfam:PF00857 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB007648 Gene3D:3.40.50.850
SUPFAM:SSF52499 GO:GO:0019674 GO:GO:0008936 HOGENOM:HOG000078670
UniGene:At.73054 EMBL:BT004805 EMBL:AK227782 IPI:IPI00537755
RefSeq:NP_197714.1 UniGene:At.31020 ProteinModelPortal:Q9FMX7
SMR:Q9FMX7 IntAct:Q9FMX7 PRIDE:Q9FMX7 EnsemblPlants:AT5G23230.1
GeneID:832387 KEGG:ath:AT5G23230 TAIR:At5g23230 eggNOG:COG1535
InParanoid:Q9FMX7 OMA:KSTYSAF PhylomeDB:Q9FMX7 ProtClustDB:PLN02621
Genevestigator:Q9FMX7 Uniprot:Q9FMX7
Length = 198
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 140/192 (72%), Positives = 160/192 (83%)
Query: 7 SSYEKYEIRKRNPNPKSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHC 66
SS YE RKR PNPK + LLVIDMQNHF S+A+PIL N L T+ +CRRASIPVFFTRH
Sbjct: 4 SSSRTYETRKREPNPKIAALLVIDMQNHFYSMAEPILQNALTTIDICRRASIPVFFTRHN 63
Query: 67 HKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERL 126
HKSP D+GMLGEWWNGDL+ DGT D+E++PEI V G DE++EK+TYSAF NT LQE+L
Sbjct: 64 HKSPTDHGMLGEWWNGDLILDGTTDSEIIPEINRQVTGPDEIVEKSTYSAFNNTHLQEKL 123
Query: 127 VGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFA 186
+GV+EVIV GVMTNLCCETTAR+AFV+GFRVFFSTDATAT + ELHEATL NLAYGFA
Sbjct: 124 DKIGVKEVIVIGVMTNLCCETTAREAFVKGFRVFFSTDATATVNEELHEATLMNLAYGFA 183
Query: 187 YLFDCERLEAGL 198
YL DC+RL GL
Sbjct: 184 YLVDCDRLRRGL 195
>TAIR|locus:2166948 [details] [associations]
symbol:NIC3 "nicotinamidase 3" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=IEA;ISS] [GO:0008936
"nicotinamidase activity" evidence=IDA] InterPro:IPR000868
Pfam:PF00857 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB007648
Gene3D:3.40.50.850 SUPFAM:SSF52499 GO:GO:0008936
HOGENOM:HOG000078670 eggNOG:COG1535 ProtClustDB:PLN02621
EMBL:BT002920 EMBL:BT004341 IPI:IPI00519900 RefSeq:NP_197713.1
UniGene:At.43885 UniGene:At.67217 ProteinModelPortal:Q9FMX8
SMR:Q9FMX8 IntAct:Q9FMX8 PaxDb:Q9FMX8 PRIDE:Q9FMX8
EnsemblPlants:AT5G23220.1 GeneID:832386 KEGG:ath:AT5G23220
TAIR:At5g23220 InParanoid:Q9FMX8 OMA:MAMASCC PhylomeDB:Q9FMX8
ArrayExpress:Q9FMX8 Genevestigator:Q9FMX8 Uniprot:Q9FMX8
Length = 198
Score = 740 (265.6 bits), Expect = 2.8e-73, P = 2.8e-73
Identities = 137/194 (70%), Positives = 162/194 (83%)
Query: 7 SSYEKYEIRKRNPNPKSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHC 66
SS KYE RKR+PN K + LLVIDMQNHFSS+AKPIL+N L T+ +CRRAS+PVFFTRH
Sbjct: 4 SSTRKYETRKRDPNSKIAALLVIDMQNHFSSMAKPILNNVLTTIDICRRASVPVFFTRHN 63
Query: 67 HKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERL 126
HKSP D+GMLGEW NGD++ DGT D+E++ EI+G V G DE++EKNTYSAF TRLQE L
Sbjct: 64 HKSPTDHGMLGEWCNGDVILDGTTDSEIIQEIQGQVTGPDEMVEKNTYSAFNKTRLQENL 123
Query: 127 VGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFA 186
+GV+EVIV GVMTNLCCETTAR+AF++GFRVFFSTDATAT + ELHEATL NLA+GFA
Sbjct: 124 EKIGVKEVIVIGVMTNLCCETTAREAFIKGFRVFFSTDATATFNEELHEATLMNLAFGFA 183
Query: 187 YLFDCERLEAGLFG 200
YL DC++L L G
Sbjct: 184 YLVDCDKLRRSLLG 197
>TIGR_CMR|BA_2371 [details] [associations]
symbol:BA_2371 "isochorismatase" species:198094 "Bacillus
anthracis str. Ames" [GO:0008908 "isochorismatase activity"
evidence=ISS] [GO:0019290 "siderophore biosynthetic process"
evidence=ISS] InterPro:IPR000868 InterPro:IPR016291 Pfam:PF00857
PIRSF:PIRSF001111 PRINTS:PR01398 InterPro:IPR009081 Pfam:PF00550
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:1.10.1200.10 SUPFAM:SSF47336 PROSITE:PS50075
HOGENOM:HOG000078667 KO:K01252 OMA:MWGPGLN GO:GO:0008908
Gene3D:3.40.50.850 SUPFAM:SSF52499 RefSeq:NP_844753.1
RefSeq:YP_019015.1 RefSeq:YP_028468.1 HSSP:O33409
ProteinModelPortal:Q81QP8 DNASU:1083815
EnsemblBacteria:EBBACT00000009199 EnsemblBacteria:EBBACT00000016713
EnsemblBacteria:EBBACT00000021823 GeneID:1083815 GeneID:2816570
GeneID:2852177 KEGG:ban:BA_2371 KEGG:bar:GBAA_2371 KEGG:bat:BAS2207
ProtClustDB:CLSK887817 BioCyc:BANT260799:GJAJ-2273-MONOMER
BioCyc:BANT261594:GJ7F-2354-MONOMER Uniprot:Q81QP8
Length = 295
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 55/170 (32%), Positives = 87/170 (51%)
Query: 19 PNPKSSVLLVIDMQNHF----SSIAKP---ILDNTLATVQLCRRASIPVFFTRHCHKSPA 71
P+PK +VLL+ DMQ +F S P ++ N + C+ IPV +T
Sbjct: 26 PDPKRAVLLIHDMQEYFLDAYSDKESPKVELISNIKVIREKCKELGIPVVYTAQPGGQTL 85
Query: 72 DY-GMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEV-IEKNTYSAFGNTRLQERLVGM 129
+ G+L ++W GD + G +++ E L D++ + K YSAF T L E L
Sbjct: 86 EQRGLLQDFW-GDGIPAGPDKKKIVDE---LTPDEDDIFLTKWRYSAFKKTNLLEILNEQ 141
Query: 130 GVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLK 179
G +++I+CG+ ++ C TA +AF+ G + FF DA A LE H+ L+
Sbjct: 142 GRDQLIICGIYAHIGCLLTACEAFMDGIQPFFVADAVADFSLEHHKQALE 191
>UNIPROTKB|P0ADI4 [details] [associations]
symbol:entB species:83333 "Escherichia coli K-12"
[GO:0016765 "transferase activity, transferring alkyl or aryl
(other than methyl) groups" evidence=IMP] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0009239 "enterobactin biosynthetic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008908 "isochorismatase activity" evidence=IEA]
InterPro:IPR000868 InterPro:IPR016291 Pfam:PF00857
PIRSF:PIRSF001111 PRINTS:PR01398 UniPathway:UPA00017
InterPro:IPR009081 Pfam:PF00550 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
Gene3D:1.10.1200.10 PROSITE:PS50075 PROSITE:PS00012 EMBL:U82598
EMBL:M24148 GO:GO:0016765 EMBL:M24143 GO:GO:0009239 PIR:C91904
RefSeq:NP_415127.1 RefSeq:YP_488884.1 PDB:2FQ1 PDB:3RG2 PDBsum:2FQ1
PDBsum:3RG2 ProteinModelPortal:P0ADI4 SMR:P0ADI4 IntAct:P0ADI4
MINT:MINT-1241343 SWISS-2DPAGE:P0ADI4 PRIDE:P0ADI4
EnsemblBacteria:EBESCT00000003995 EnsemblBacteria:EBESCT00000018134
GeneID:12931911 GeneID:946178 KEGG:ecj:Y75_p0584 KEGG:eco:b0595
PATRIC:32116366 EchoBASE:EB0256 EcoGene:EG10260 eggNOG:COG3433
HOGENOM:HOG000078667 KO:K01252 OMA:MWGPGLN ProtClustDB:CLSK879705
BioCyc:EcoCyc:ENTB-MONOMER BioCyc:ECOL316407:JW0587-MONOMER
BioCyc:MetaCyc:ENTB-MONOMER SABIO-RK:P0ADI4
EvolutionaryTrace:P0ADI4 Genevestigator:P0ADI4 GO:GO:0008908
Gene3D:3.40.50.850 SUPFAM:SSF52499 Uniprot:P0ADI4
Length = 285
Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
Identities = 59/198 (29%), Positives = 98/198 (49%)
Query: 1 MATSKCSSY---EKYEIRKRNPN----PKSSVLLVIDMQNHFSSIAK---PILDNTLATV 50
MA K +Y E ++I + + P+ + LL+ DMQ++F S P+++ +A +
Sbjct: 1 MAIPKLQAYALPESHDIPQNKVDWAFEPQRAALLIHDMQDYFVSFWGENCPMMEQVIANI 60
Query: 51 ----QLCRRASIPVFFTRHC-HKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGA 105
C++ +IPV++T +S D +L + W L T E + L A
Sbjct: 61 AALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGL----TRSPEQQKVVDRLTPDA 116
Query: 106 DE-VIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164
D+ V+ K YSAF + L++ L G ++I+ GV ++ C TTA DAF+R + F D
Sbjct: 117 DDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVAD 176
Query: 165 ATATSDLELHEATLKNLA 182
A A + H +LK +A
Sbjct: 177 ALADFSRDEHLMSLKYVA 194
>TIGR_CMR|GSU_0569 [details] [associations]
symbol:GSU_0569 "isochorismatase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0016787
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078670 RefSeq:NP_951627.1
ProteinModelPortal:Q74FN7 GeneID:2685739 KEGG:gsu:GSU0569
PATRIC:22023887 OMA:TDAWIAG ProtClustDB:CLSK824978
BioCyc:GSUL243231:GH27-594-MONOMER Uniprot:Q74FN7
Length = 182
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 51/149 (34%), Positives = 73/149 (48%)
Query: 26 LLVIDMQNHFSSIAKPI------LDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEW 79
LLVID+QN + + A P+ N LA + IPV RH + P
Sbjct: 5 LLVIDVQNEYFTGALPVSYPEGSFPNILAAMDTATANGIPVVVVRHASRRP--------- 55
Query: 80 WNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGV 139
+ G+ EL PE+ D ++EKN +F +T L+ L G++ +++ G
Sbjct: 56 -DSATFRPGSPGWELHPEVAR--RPFDLLLEKNLPGSFTDTNLEAWLRERGIDTLVISGY 112
Query: 140 MTNLCCETTARDAFVRGFRVFFSTDATAT 168
MT +CC+TT+R AF RGF V F DAT T
Sbjct: 113 MTQMCCDTTSRQAFHRGFAVEFLADATGT 141
>TIGR_CMR|CHY_0679 [details] [associations]
symbol:CHY_0679 "isochorismatase family protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008152 "metabolic process" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=ISS] InterPro:IPR000868 Pfam:PF00857
GO:GO:0003824 EMBL:CP000141 GenomeReviews:CP000141_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 eggNOG:COG1335
HOGENOM:HOG000078666 RefSeq:YP_359534.1 ProteinModelPortal:Q3AEA0
STRING:Q3AEA0 GeneID:3728153 KEGG:chy:CHY_0679 PATRIC:21274491
OMA:ENLICCG ProtClustDB:CLSK941315
BioCyc:CHYD246194:GJCN-679-MONOMER Uniprot:Q3AEA0
Length = 191
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 50/176 (28%), Positives = 84/176 (47%)
Query: 26 LLVIDMQNHFSSIAKP--------ILDNTLATVQLCRRASIPVFFTRHCH-KSPADYGML 76
+++IDM N F P I+ N V+ I V F + H K+ AD+ +
Sbjct: 8 IVIIDMLNDFIGPNAPLRCPDGEKIVPNLQKLVEFAHENGINVVFVQEAHRKNDADFRVR 67
Query: 77 GEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIV 136
GT ++ +PE++ D +++K +SAF T L L ++ V+V
Sbjct: 68 PVH-----AVKGTWGSDFIPELRPDEEKGDYIVQKRRHSAFAYTDLDLYLREEKIDTVVV 122
Query: 137 CGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCE 192
GV TN+C +TA DA + V +D A+++ E+H+A L+++A FA + E
Sbjct: 123 TGVWTNVCVRSTASDALYHAYNVIAISDCCASANEEMHQAGLRDMAL-FAEVMTLE 177
>TIGR_CMR|BA_3315 [details] [associations]
symbol:BA_3315 "isochorismatase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 RefSeq:NP_845603.1
RefSeq:YP_019949.1 RefSeq:YP_029329.1 ProteinModelPortal:Q81NA0
DNASU:1088502 EnsemblBacteria:EBBACT00000008316
EnsemblBacteria:EBBACT00000015234 EnsemblBacteria:EBBACT00000019862
GeneID:1088502 GeneID:2816812 GeneID:2848885 KEGG:ban:BA_3315
KEGG:bar:GBAA_3315 KEGG:bat:BAS3072 HOGENOM:HOG000093890
OMA:NTMREND ProtClustDB:CLSK584524
BioCyc:BANT260799:GJAJ-3134-MONOMER
BioCyc:BANT261594:GJ7F-3243-MONOMER Uniprot:Q81NA0
Length = 193
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 42/115 (36%), Positives = 59/115 (51%)
Query: 82 GDL--VYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGV 139
GD V G+ AE+LPE + D ++EKN S F T L E L +GV+ +I+ G+
Sbjct: 64 GDFLPVTKGSKGAEILPEF---LHEKDIIMEKNKDSGFFETNLDETLKKLGVDTIIITGM 120
Query: 140 MTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERL 194
T +C +TTA D F RG+ V DA ++ E E LK L A + E +
Sbjct: 121 QTQICVQTTAADGFFRGYNVIVPEDAVVSAKDEDKERALKWLGSYCAKIMSIEEI 175
>TIGR_CMR|BA_2963 [details] [associations]
symbol:BA_2963 "isochorismatase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 HOGENOM:HOG000078670
RefSeq:NP_845297.1 RefSeq:YP_019605.1 RefSeq:YP_029010.1
ProteinModelPortal:Q81P55 DNASU:1088097
EnsemblBacteria:EBBACT00000013016 EnsemblBacteria:EBBACT00000017983
EnsemblBacteria:EBBACT00000021000 GeneID:1088097 GeneID:2819948
GeneID:2853180 KEGG:ban:BA_2963 KEGG:bar:GBAA_2963 KEGG:bat:BAS2752
OMA:GPEGSPI ProtClustDB:CLSK916874
BioCyc:BANT260799:GJAJ-2815-MONOMER
BioCyc:BANT261594:GJ7F-2923-MONOMER Uniprot:Q81P55
Length = 176
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/157 (31%), Positives = 79/157 (50%)
Query: 26 LLVIDMQNHFSSIAKPILDNT--LATVQL----CRRASIPVFFTRHCHKSPADYGMLGEW 79
LLVID+Q + P+ + L T+Q CR IPV + +H P D+ L +
Sbjct: 5 LLVIDVQAGMYTAGMPVHNGEKFLETLQELIGECRSNDIPVIYVQH--NGPKDHP-LEKG 61
Query: 80 WNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGV 139
+G ++ A + P ++G + V+EK T +F T L+E L G++ VI+ G+
Sbjct: 62 TDGWKIH-----AAIAP-LEG-----ECVVEKTTPDSFHKTNLKEVLQDKGIDHVIISGM 110
Query: 140 MTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEA 176
T C +TT R A G+++ +DA +T D E+ A
Sbjct: 111 QTQYCVDTTTRRACSEGYKITLVSDAHSTFDTEVLRA 147
>TIGR_CMR|VC_0771 [details] [associations]
symbol:VC_0771 "vibriobactin-specific isochorismatase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008908
"isochorismatase activity" evidence=ISS] [GO:0019290 "siderophore
biosynthetic process" evidence=ISS] InterPro:IPR000868
InterPro:IPR016291 Pfam:PF00857 PIRSF:PIRSF001111 PRINTS:PR01398
UniPathway:UPA00022 InterPro:IPR009081 Pfam:PF00550 EMBL:CP000627
EMBL:CP001235 GenomeReviews:CP001235_GR Gene3D:1.10.1200.10
SUPFAM:SSF47336 PROSITE:PS50075 GenomeReviews:CP000627_GR
eggNOG:COG3433 HOGENOM:HOG000078667 KO:K01252 OMA:MWGPGLN
GO:GO:0008908 Gene3D:3.40.50.850 SUPFAM:SSF52499 GO:GO:0019537
EMBL:AF287252 RefSeq:YP_001216256.1 RefSeq:YP_002819041.1
ProteinModelPortal:A5F3F4 STRING:A5F3F4 GeneID:5135966
GeneID:7774796 KEGG:vco:VC0395_A0300 KEGG:vcr:VC395_0788
ProtClustDB:CLSK874104 Uniprot:A5F3F4
Length = 293
Score = 152 (58.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 51/167 (30%), Positives = 82/167 (49%)
Query: 24 SVLLVIDMQ----NHFSSIAKPILDNTLATVQL---CRRASIPVFFTRH-CHKSPADYGM 75
+VLL+ DMQ ++F S A+PI QL ++A IPV +T ++ PA+ +
Sbjct: 29 AVLLIHDMQEYFVHYFDSQAEPIPSLIKHIQQLKAHAKQAGIPVVYTAQPANQDPAERAL 88
Query: 76 LGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVI 135
L ++W L + A L PE D + K YSAF + L + L G +++I
Sbjct: 89 LSDFWGPGLSEETAIIAPLAPE------SGDVQLTKWRYSAFKKSPLLDWLRETGRDQLI 142
Query: 136 VCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLA 182
+ GV ++ +TA DAF+ + F D A L HE +L+ ++
Sbjct: 143 ITGVYAHIGILSTALDAFMFDIQPFVIGDGVADFSLSDHEFSLRYIS 189
>TAIR|locus:2094927 [details] [associations]
symbol:AT3G16190 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008152 "metabolic process"
evidence=IEA;ISS] InterPro:IPR000868 Pfam:PF00857 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016787 Gene3D:3.40.50.850
SUPFAM:SSF52499 eggNOG:COG1335 HOGENOM:HOG000078668 HSSP:O58727
EMBL:AY058125 EMBL:AY086380 EMBL:AY143919 IPI:IPI00522135
RefSeq:NP_566539.1 UniGene:At.21500 ProteinModelPortal:Q93Z51
SMR:Q93Z51 IntAct:Q93Z51 STRING:Q93Z51 PaxDb:Q93Z51 PRIDE:Q93Z51
EnsemblPlants:AT3G16190.1 GeneID:820865 KEGG:ath:AT3G16190
TAIR:At3g16190 InParanoid:Q93Z51 OMA:NFPNCPR PhylomeDB:Q93Z51
ProtClustDB:CLSN2688438 Genevestigator:Q93Z51 Uniprot:Q93Z51
Length = 196
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 53/176 (30%), Positives = 84/176 (47%)
Query: 22 KSSVLLVIDMQNHF------SSI--AKPILDNTLATVQLCRRASIPVFFTRHCH-KSPAD 72
+++ LLVIDMQN F + + K I+ N + V+L R+ I V + H + D
Sbjct: 6 RNTALLVIDMQNDFIEEGAVTQVKGGKSIVPNVIRVVELARQRGILVIWVVREHDRQGRD 65
Query: 73 YGMLGEW-WNGDLV---YDGTADAELLPEIKGLVAGADE--VIEKNTYSAFGNTRLQERL 126
+ ++ + V GT AEL + GL+ ++ I K +SAF +T L L
Sbjct: 66 VELFRRHNYSSEKVGPVIKGTVGAEL---VDGLMINEEDDYKIVKTRFSAFFSTNLHSFL 122
Query: 127 VGMGVEEVIVCGVMTNLCCETTARDAFVRGF-RVFFSTDATATSDLELHEATLKNL 181
GV ++++ GV T C T DA + V TDATA + E+H A + ++
Sbjct: 123 QTSGVTKLVIAGVQTPNCIRQTVFDAVALDYPNVTVITDATAAATPEIHTANILDM 178
>TIGR_CMR|SO_4590 [details] [associations]
symbol:SO_4590 "isochorismatase family protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078670 RefSeq:NP_720106.1
ProteinModelPortal:Q8E8S1 GeneID:1172175 KEGG:son:SO_4590
PATRIC:23528847 OMA:EQLVICG ProtClustDB:CLSK903527 Uniprot:Q8E8S1
Length = 177
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 44/166 (26%), Positives = 78/166 (46%)
Query: 24 SVLLVIDMQN-HFSSIAKP------ILDNTLATVQLCRRASIPVFFTRHCHKSPADYGML 76
+ L++ID+QN +F A P +L+ TL Q ++ +P+ +H + G+
Sbjct: 10 TALVIIDVQNDYFVDGAYPQWQVNEMLERTLHCAQQAQQQGMPIILVQHI--ADTTQGV- 66
Query: 77 GEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIV 136
++N GT E+ P++ L+ A V+ K +F NT L ++L M + +++
Sbjct: 67 APFFN-----PGTQGVEIHPKLLALLPNASIVV-KQFADSFDNTELAKQLQEMQITHLLL 120
Query: 137 CGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLA 182
CG+MT C TA G+ V +DA +H+ L L+
Sbjct: 121 CGIMTQNCVTHTALSHSALGYSVKIISDACTAPTQMVHQIALSALS 166
>TIGR_CMR|SPO_1471 [details] [associations]
symbol:SPO_1471 "isochorismatase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078668 RefSeq:YP_166712.1
ProteinModelPortal:Q5LTE3 GeneID:3195693 KEGG:sil:SPO1471
PATRIC:23376259 OMA:SICVESS ProtClustDB:CLSK933561 Uniprot:Q5LTE3
Length = 206
Score = 134 (52.2 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 105 ADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164
AD +EK YSAF TRL+ L MG+ ++IV G++TN +T RDA +R +D
Sbjct: 110 ADFTVEKVAYSAFYQTRLEYILRAMGIRQLIVGGIVTNGGVASTLRDAHLRDIDTVMLSD 169
Query: 165 ATATSDLELHEATLKNL 181
A E+H+ATL +L
Sbjct: 170 GCAAFRDEVHDATLLSL 186
Score = 37 (18.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 24 SVLLVIDMQNHF 35
+ LL ID+QN F
Sbjct: 12 TALLTIDLQNDF 23
>UNIPROTKB|P0ADI7 [details] [associations]
symbol:yecD "predicted hydrolase" species:83333
"Escherichia coli K-12" [GO:0008152 "metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000868
Pfam:PF00857 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016787 Gene3D:3.40.50.850
SUPFAM:SSF52499 eggNOG:COG1335 HOGENOM:HOG000078668 EMBL:X53863
PIR:C64949 RefSeq:NP_416381.2 RefSeq:YP_490129.1 PDB:1J2R
PDBsum:1J2R ProteinModelPortal:P0ADI7 SMR:P0ADI7
EnsemblBacteria:EBESCT00000002425 EnsemblBacteria:EBESCT00000016718
GeneID:12930338 GeneID:946384 KEGG:ecj:Y75_p1843 KEGG:eco:b1867
PATRIC:32119057 EchoBASE:EB2280 EcoGene:EG12378 OMA:WELGFSL
ProtClustDB:PRK11440 BioCyc:EcoCyc:EG12378-MONOMER
BioCyc:ECOL316407:JW5307-MONOMER EvolutionaryTrace:P0ADI7
Genevestigator:P0ADI7 Uniprot:P0ADI7
Length = 188
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 48/174 (27%), Positives = 83/174 (47%)
Query: 20 NPKSSVLLVIDMQNH---FSS---IAKPILDNTLATVQLCRRASIPVFFTRHCHKSPADY 73
N K++ L+VID+Q F+ A +++ R + PVF R ADY
Sbjct: 5 NAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWS--ADY 62
Query: 74 GMLGEWWNGDLVYDGTADAELLPEI----KGLVAGADEVIE--KNTYSAFGNTRLQERLV 127
E + D + A++LPE + D IE K + AF T L+ +L
Sbjct: 63 A---EALKQPV--DAPSPAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLR 117
Query: 128 GMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNL 181
G++ +++CG+ TN+ E+TAR+A+ GF + + DA + + E H ++ ++
Sbjct: 118 RRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHI 171
>TIGR_CMR|BA_0311 [details] [associations]
symbol:BA_0311 "isochorismatase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 HOGENOM:HOG000078670 OMA:VVHVRHE
RefSeq:NP_842860.1 RefSeq:YP_016923.1 RefSeq:YP_026576.1
ProteinModelPortal:Q81ZF6 DNASU:1084334
EnsemblBacteria:EBBACT00000009250 EnsemblBacteria:EBBACT00000017266
EnsemblBacteria:EBBACT00000019742 GeneID:1084334 GeneID:2815380
GeneID:2847810 KEGG:ban:BA_0311 KEGG:bar:GBAA_0311 KEGG:bat:BAS0296
ProtClustDB:CLSK915774 BioCyc:BANT260799:GJAJ-338-MONOMER
BioCyc:BANT261594:GJ7F-348-MONOMER Uniprot:Q81ZF6
Length = 187
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 45/163 (27%), Positives = 76/163 (46%)
Query: 24 SVLLVIDMQNHFSSIAKPILDNTLAT-------VQLCRRASIPVFFTRHCH-KSPADYGM 75
+ LL++D+QN + K L N +QL R+ + P+F +H K A + +
Sbjct: 3 TALLLVDIQNDYFPHGKMELRNPAEASAYASQLLQLFRKKNEPIFHIQHISIKEDATFFL 62
Query: 76 LGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVI 135
T + ++ L + VI K+ ++F T L ++L + +E V+
Sbjct: 63 -----------PNTEGVHIHESVRPL--REESVILKHYPNSFRETDLLKQLQRLAIEHVV 109
Query: 136 VCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATL 178
+CG+MT++C + T R AF G + DA AT DL AT+
Sbjct: 110 ICGMMTHMCIDATVRAAFDFGLQCTVIHDACATKDLSFKNATI 152
>UNIPROTKB|P75897 [details] [associations]
symbol:rutB "peroxyureidoacrylate / ureidoacrylate amido
hydrolase" species:83333 "Escherichia coli K-12" [GO:0016811
"hydrolase activity, acting on carbon-nitrogen (but not peptide)
bonds, in linear amides" evidence=IEA;IDA] [GO:0006212 "uracil
catabolic process" evidence=IMP] [GO:0006208 "pyrimidine nucleobase
catabolic process" evidence=IMP] [GO:0019740 "nitrogen utilization"
evidence=IMP] HAMAP:MF_00830 InterPro:IPR000868 InterPro:IPR019916
Pfam:PF00857 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0016811 GO:GO:0019740 GO:GO:0006212
Gene3D:3.40.50.850 SUPFAM:SSF52499 eggNOG:COG1335 PIR:A64843
RefSeq:NP_415531.2 RefSeq:YP_489284.1 ProteinModelPortal:P75897
SMR:P75897 DIP:DIP-28106N PRIDE:P75897
EnsemblBacteria:EBESCT00000003324 EnsemblBacteria:EBESCT00000016330
GeneID:12933003 GeneID:945699 KEGG:ecj:Y75_p0984 KEGG:eco:b1011
PATRIC:32117251 EchoBASE:EB3618 EcoGene:EG13858
HOGENOM:HOG000078669 KO:K09020 OMA:MQNAYAS ProtClustDB:CLSK879924
BioCyc:EcoCyc:G6522-MONOMER BioCyc:ECOL316407:JW5139-MONOMER
BioCyc:MetaCyc:G6522-MONOMER Genevestigator:P75897
TIGRFAMs:TIGR03614 Uniprot:P75897
Length = 230
Score = 127 (49.8 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 40/128 (31%), Positives = 61/128 (47%)
Query: 67 HKSPADYGMLGE-WWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQER 125
HKS A M + G L+ G+ D +L+ E+ + D V+ K YS F NT L
Sbjct: 90 HKSNALKTMRKQPQLQGKLLAKGSWDYQLVDEL--VPQPGDIVLPKPRYSGFFNTPLDSI 147
Query: 126 LVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLEL-HEATLKNLAYG 184
L G+ ++ G+ TN+C E+T RD F + DAT + + +A L N+
Sbjct: 148 LRSRGIRHLVFTGIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPKFAQKAALFNIETF 207
Query: 185 FAYLFDCE 192
F ++ D E
Sbjct: 208 FGWVSDVE 215
Score = 51 (23.0 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 8/18 (44%), Positives = 15/18 (83%)
Query: 20 NPKSSVLLVIDMQNHFSS 37
+P+ S L+V+DMQN +++
Sbjct: 14 DPQQSALIVVDMQNAYAT 31
>TIGR_CMR|BA_1382 [details] [associations]
symbol:BA_1382 "isochorismatase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 HOGENOM:HOG000078670
RefSeq:NP_843840.1 RefSeq:YP_018004.1 RefSeq:YP_027549.1
ProteinModelPortal:Q81TA4 DNASU:1085556
EnsemblBacteria:EBBACT00000011525 EnsemblBacteria:EBBACT00000017962
EnsemblBacteria:EBBACT00000020151 GeneID:1085556 GeneID:2815506
GeneID:2851998 KEGG:ban:BA_1382 KEGG:bar:GBAA_1382 KEGG:bat:BAS1280
OMA:TNNSVES ProtClustDB:CLSK887639
BioCyc:BANT260799:GJAJ-1354-MONOMER
BioCyc:BANT261594:GJ7F-1410-MONOMER Uniprot:Q81TA4
Length = 184
Score = 134 (52.2 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 48/144 (33%), Positives = 63/144 (43%)
Query: 54 RRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNT 113
R+ PVF +H +K D M Y+G E+K L + VI+K
Sbjct: 41 RKRKRPVFHIQHVNKEN-DQSMF---------YEGAETVNFKEEVKPL--SGEVVIQKTV 88
Query: 114 YSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATAT----- 168
SAF T L+E+L V++ G+ TN C ETT R A GF + DATAT
Sbjct: 89 NSAFIGTNLEEQLRENKCNAVVIVGLTTNHCVETTTRMAGNLGFTTYLVRDATATFNRKG 148
Query: 169 ------SDLELHEATLKNLAYGFA 186
S ++H TL NL FA
Sbjct: 149 LDGKEYSAEDIHNMTLVNLHEEFA 172
>TIGR_CMR|SPO_1828 [details] [associations]
symbol:SPO_1828 "isochorismatase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078668 RefSeq:YP_167065.1
ProteinModelPortal:Q5LSE0 GeneID:3193702 KEGG:sil:SPO1828
PATRIC:23376987 OMA:TDQCVES ProtClustDB:CLSK869406 Uniprot:Q5LSE0
Length = 213
Score = 122 (48.0 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 43/171 (25%), Positives = 77/171 (45%)
Query: 34 HFSSIAKPILDNTLATVQLCRRASIPVFFTR------HCHKSPADYGMLGEWWNGDLVYD 87
+F + ++ N A CR A + V +T DY + G +N V
Sbjct: 48 YFDQLDSRVIPNMQAVQAACRAAGVEVMYTTIESLTLDGRDRSLDYKITG--FN---VPK 102
Query: 88 GTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCET 147
G+ D +++ +I G + V+ K + S F +T + L +GV ++++ G++T+ C E+
Sbjct: 103 GSWDGKVIDQIAP--EGDEIVLPKGSSSVFVSTHIDYVLRNLGVRQLVISGLITDQCVES 160
Query: 148 TARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAGL 198
RDA G+ V +DA T H+ +L + G+ + L A L
Sbjct: 161 AIRDACDLGYLVTQVSDACLTYSQARHDNSLSAIK-GYCRQVTTQELVAEL 210
Score = 42 (19.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 11/20 (55%), Positives = 13/20 (65%)
Query: 21 PKSSVLLVIDMQNHFSSIAK 40
P S LL ID+QN FS+ K
Sbjct: 11 PAQSALLFIDVQN-FSAHRK 29
>ASPGD|ASPL0000002190 [details] [associations]
symbol:AN6124 species:162425 "Emericella nidulans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR000868 Pfam:PF00857 INTERPRO:IPR004330
Pfam:PF03101 GO:GO:0016787 EMBL:BN001301 Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078668 ProteinModelPortal:C8V2D3
EnsemblFungi:CADANIAT00006888 OMA:PRNGLTE Uniprot:C8V2D3
Length = 389
Score = 127 (49.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 39/113 (34%), Positives = 59/113 (52%)
Query: 69 SPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVG 128
SP G L G+L +D T D EL P + G + VI+K AF T + L
Sbjct: 249 SPGPLGRL--LIRGELGHD-TVD-ELYP-LPG-----EPVIDKPGRGAFAYTDFELLLRN 298
Query: 129 MGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNL 181
G++ +++ GV T++C TT R+A RGF D TA S+ LH +T++++
Sbjct: 299 KGIKNLVLAGVTTDVCVSTTMREANDRGFDCVILEDGTAASEPALHVSTIESV 351
Score = 46 (21.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 21 PKSSVLLVIDMQNHFS-------------SIAKPILDNTLATVQLCRRASIPVFFTRHCH 67
P ++ L++IDMQ F S A+ ++ + R A PV+ TR H
Sbjct: 164 PYTTALVIIDMQKDFCAPGGYMEFQGYDISPARELIPKLQQLLNTFRSAGFPVYHTREGH 223
Query: 68 K 68
+
Sbjct: 224 R 224
>UNIPROTKB|C5NU54 [details] [associations]
symbol:sttH "Streptothricin hydrolase" species:1971
"Streptomyces noursei" [GO:0016812 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in cyclic amides"
evidence=IDA] InterPro:IPR000868 Pfam:PF00857 GO:GO:0046677
GO:GO:0016812 Gene3D:3.40.50.850 SUPFAM:SSF52499 EMBL:AB512090
ProteinModelPortal:C5NU54 Uniprot:C5NU54
Length = 252
Score = 133 (51.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 53/150 (35%), Positives = 65/150 (43%)
Query: 26 LLVIDMQNHFSS--IAKPILDNTL-ATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNG 82
LLV+D+Q F S A P D L T L RA H GE G
Sbjct: 48 LLVVDVQAAFVSGWEAVPDADRVLRCTRDLLSRARAAGALVVHLQND-------GE--PG 98
Query: 83 DLVYDGTADAEL-LPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMT 141
+ T EL LP G + V+ K F +T L + L GV E+ VCGV++
Sbjct: 99 AVDAPHTPGWELHLPVEPG---PRERVVRKTEDDGFADTPLGDLLTDAGVTELAVCGVLS 155
Query: 142 NLCCETTARDAFVRGFRVFFSTDATATSDL 171
+C TAR A VRG RV DA AT D+
Sbjct: 156 EMCVAATARTALVRGHRVVLPHDAHATYDI 185
>TIGR_CMR|CPS_0771 [details] [associations]
symbol:CPS_0771 "isochorismatase family protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 eggNOG:COG1335 RefSeq:YP_267520.1
ProteinModelPortal:Q488J4 STRING:Q488J4 DNASU:3522468
GeneID:3522468 KEGG:cps:CPS_0771 PATRIC:21464853
HOGENOM:HOG000251367 OMA:ISKELWT ProtClustDB:CLSK715302
BioCyc:CPSY167879:GI48-857-MONOMER Uniprot:Q488J4
Length = 316
Score = 134 (52.2 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 41/154 (26%), Positives = 71/154 (46%)
Query: 22 KSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWN 81
K + L+++D+QN + S + LDNT + ++AS + R L E N
Sbjct: 134 KRTALVLVDLQNDYFSGGRFELDNTDSAA---KQASQLLAHFRQKELPVIHMQHLFEETN 190
Query: 82 GDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMT 141
T AE+ +K + VI K+ +F T L++ LV +G++ +++ G M
Sbjct: 191 AAFFSANTVGAEIESSVKP--TANEPVIIKHQIDSFIETTLEQTLVELGIDNLVIVGAMA 248
Query: 142 NLCCETTARDAFVRGFRVFFSTDATATSDLELHE 175
C +T R A +G++ +DA A LE +
Sbjct: 249 QACVQTLCRSAVNKGYKCQVISDAIAAPKLEYQQ 282
>TIGR_CMR|BA_0016 [details] [associations]
symbol:BA_0016 "isochorismatase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
Gene3D:3.40.50.850 SUPFAM:SSF52499 HOGENOM:HOG000078666 KO:K01463
RefSeq:NP_842587.1 RefSeq:YP_016621.1 RefSeq:YP_026307.1
ProteinModelPortal:Q81W21 DNASU:1086797
EnsemblBacteria:EBBACT00000010721 EnsemblBacteria:EBBACT00000017939
EnsemblBacteria:EBBACT00000020588 GeneID:1086797 GeneID:2816400
GeneID:2851656 KEGG:ban:BA_0016 KEGG:bar:GBAA_0016 KEGG:bat:BAS0019
OMA:NDAYMRE ProtClustDB:CLSK886546
BioCyc:BANT260799:GJAJ-22-MONOMER BioCyc:BANT261594:GJ7F-22-MONOMER
Uniprot:Q81W21
Length = 179
Score = 116 (45.9 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 50/172 (29%), Positives = 75/172 (43%)
Query: 22 KSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKS---PADY-GMLG 77
K++ LL+IDM N F PIL + C + P+ + KS P Y
Sbjct: 2 KNTALLIIDMINDFQFSHGPIL------AKKCEMITNPILQLKKTMKSFGYPIIYINDHY 55
Query: 78 EWWNGDLVYDGTADAELLPE--IKGLVAGADEVIE-KNTYSAFGNTRLQERLVGMGVEEV 134
+ W D+ T E I + +D+ I K YSAF T L L + +E +
Sbjct: 56 QLWRSDIDQLITHCTNEYSENIIHKIAPSSDDYIFIKPHYSAFYETPLNSLLGYLKIENL 115
Query: 135 IVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSD-------LELHEATLK 179
I+ GV N+C TA DA +R + ++ D A++ L++ E TLK
Sbjct: 116 ILTGVAGNICILFTANDAHMRNYTLYVPQDCIASNHDQDNLHALKIMETTLK 167
>DICTYBASE|DDB_G0271336 [details] [associations]
symbol:DDB_G0271336 species:44689 "Dictyostelium
discoideum" [GO:0008152 "metabolic process" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] InterPro:IPR000868
Pfam:PF00857 dictyBase:DDB_G0271336 GO:GO:0003824 EMBL:AAFI02000006
Gene3D:3.40.50.850 SUPFAM:SSF52499 eggNOG:COG1335
RefSeq:XP_645638.1 ProteinModelPortal:Q55BH4 STRING:Q55BH4
EnsemblProtists:DDB0202872 GeneID:8617830 KEGG:ddi:DDB_G0271336
InParanoid:Q55BH4 OMA:YSGFRET Uniprot:Q55BH4
Length = 183
Score = 115 (45.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 47/172 (27%), Positives = 76/172 (44%)
Query: 26 LLVIDMQNHFSS-------IAKPILDNTLATVQLCRRASIP--VFFTRHCHKSPADYGML 76
L++IDM N S A I+ + ++ R+ + ++ HK D M
Sbjct: 4 LIIIDMVNDLVSGVLANEKYANEIIPSIQRLIENARKNPTEWLIVYSNDAHKED-DREM- 61
Query: 77 GEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMG-VEEVI 135
+ W G +GT A+++ +K + + + K Y AF T L E G V EV+
Sbjct: 62 -KVW-GKHAMEGTEGAQVIDSLKPMDTDNEIISPKRFYGAFDLTGLGEIFEKRGGVTEVV 119
Query: 136 VCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATL---KNLAYG 184
+ G T+ C TA AF+RG+ + +D D ++A L KN+ YG
Sbjct: 120 LVGQHTHCCVRHTAYGAFMRGYEIKVPSDGVCVFDGIDNQAALDYLKNI-YG 170
>TIGR_CMR|GSU_2290 [details] [associations]
symbol:GSU_2290 "pyrazinamidase/nicotinamidase, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006734 "NADH
metabolic process" evidence=ISS] [GO:0008936 "nicotinamidase
activity" evidence=ISS] [GO:0016811 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in linear amides"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078666 KO:K08281 OMA:DKEAYSG
HSSP:O58727 RefSeq:NP_953339.1 ProteinModelPortal:Q74AR2
GeneID:2686918 KEGG:gsu:GSU2290 PATRIC:22027439
ProtClustDB:CLSK828798 BioCyc:GSUL243231:GH27-2273-MONOMER
Uniprot:Q74AR2
Length = 201
Score = 114 (45.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 24 SVLLVIDMQNHF---SSIAKPILDNTLAT----VQLCRRASIPVFFTRHCH-KSPADYGM 75
+ LL++D+QN F S+A P D + + + R A +P+F +R H + + +
Sbjct: 5 AALLIVDVQNDFCPGGSLAVPEGDTVVPVLNGYISVFRTAGLPIFASRDWHPRMTSHFKE 64
Query: 76 LGEWWNGDLVYDGTADAELLPEI----KGLVAGADEVIEKNTYSAFGNTR-----LQERL 126
G W V G+ A+ P++ +V E++ YSAF T L L
Sbjct: 65 HGGQWPVHCV-QGSHGAQFHPDLALPGNAIVISKGMDPERDDYSAFQGTAADGTPLPTLL 123
Query: 127 VGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDL 171
G+ + + G+ T+ C + +A + G V TDA+ DL
Sbjct: 124 AARGIRHLYLGGLATDYCVKESALEGIRHGLIVTVLTDASRGVDL 168
>UNIPROTKB|Q1MW86 [details] [associations]
symbol:sttH "Streptothricin hydrolase" species:68570
"Streptomyces albulus" [GO:0016812 "hydrolase activity, acting on
carbon-nitrogen (but not peptide) bonds, in cyclic amides"
evidence=IDA] InterPro:IPR000868 Pfam:PF00857 GO:GO:0046677
GO:GO:0016812 Gene3D:3.40.50.850 SUPFAM:SSF52499 EMBL:AB248874
BioCyc:MetaCyc:MONOMER-15931 Uniprot:Q1MW86
Length = 276
Score = 114 (45.2 bits), Expect = 0.00010, P = 0.00010
Identities = 26/66 (39%), Positives = 34/66 (51%)
Query: 106 DEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA 165
+ V+ K F +T L L GV E+ VCGV++ +C TAR A G RV DA
Sbjct: 138 EHVVRKTEDDGFADTGLGALLDAAGVTELAVCGVLSEMCVAATARTALELGHRVVLPHDA 197
Query: 166 TATSDL 171
AT D+
Sbjct: 198 HATYDI 203
>TIGR_CMR|GSU_2583 [details] [associations]
symbol:GSU_2583 "isochorismatase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0016787
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000167093 OMA:SAWRRME
ProtClustDB:CLSK866405 RefSeq:NP_953629.1 ProteinModelPortal:Q74A08
SMR:Q74A08 GeneID:2687764 KEGG:gsu:GSU2583 PATRIC:22028021
BioCyc:GSUL243231:GH27-2560-MONOMER Uniprot:Q74A08
Length = 210
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 27/100 (27%), Positives = 48/100 (48%)
Query: 86 YDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCC 145
++ + L+PE+K + A + +A+ N + G ++I+ GV+T +C
Sbjct: 62 FENGPNGPLVPELKEMFPDAPYIARPGNINAWDNEEFVAAVKKTGRRQLIIAGVVTEVCV 121
Query: 146 ETTARDAFVRGFRVFFSTDATAT-SDLELHEATLKNLAYG 184
A A G+ VF TDA+ T +++ H A L+ A G
Sbjct: 122 AFPALSAVEEGYEVFVITDASGTFNEVTRHTAWLRMQAAG 161
>TIGR_CMR|SPO_3572 [details] [associations]
symbol:SPO_3572 "isochorismatase family protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:CP000031 GenomeReviews:CP000031_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 HOGENOM:HOG000078670 RefSeq:YP_168767.1
ProteinModelPortal:Q5LMJ1 GeneID:3196149 KEGG:sil:SPO3572
PATRIC:23380619 OMA:FHEESSE Uniprot:Q5LMJ1
Length = 181
Score = 106 (42.4 bits), Expect = 0.00027, P = 0.00027
Identities = 28/73 (38%), Positives = 38/73 (52%)
Query: 97 EIKGLVA--GADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFV 154
EI VA + V+ K +AF T L + L G ++ V +CG MT +C + TAR A
Sbjct: 70 EIHASVAPTATETVLTKARPNAFVGTALLDLLQGGDIQAVTLCGAMTQMCIDATARAAAD 129
Query: 155 RGFRVFFSTDATA 167
GF V + DA A
Sbjct: 130 LGFAVTVAADACA 142
>TIGR_CMR|GSU_1002 [details] [associations]
symbol:GSU_1002 "isochorismatase family protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0016787
EMBL:AE017180 GenomeReviews:AE017180_GR Gene3D:3.40.50.850
SUPFAM:SSF52499 OMA:ETHICVY HOGENOM:HOG000231574 RefSeq:NP_952056.1
ProteinModelPortal:Q74EG0 GeneID:2687485 KEGG:gsu:GSU1002
PATRIC:22024776 ProtClustDB:CLSK828128
BioCyc:GSUL243231:GH27-982-MONOMER Uniprot:Q74EG0
Length = 187
Score = 99 (39.9 bits), Expect = 0.00030, Sum P(2) = 0.00029
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 95 LPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFV 154
LP +K + G + EK T+S G+ RL +G ++VI+ G+ T++C T +
Sbjct: 69 LPVLKEKIEG--DACEKMTFSCCGDDAFLNRLAALGRKQVIITGMETHVCVLQTVIELLE 126
Query: 155 RGFRVFFSTDA 165
RG+ V DA
Sbjct: 127 RGYHVHLVRDA 137
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(2) = 0.00029
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 22 KSSVLLVIDMQNHFSSIAKP-ILD----NTLATVQLCRRASIPVFFT 63
+ +VL+VID+Q + P +L+ NT ++ + +PV T
Sbjct: 12 QQAVLVVIDVQEKLCAAMDPEVLERLTKNTGILLEAAQDLGMPVVAT 58
>ZFIN|ZDB-GENE-070518-1 [details] [associations]
symbol:isoc2 "isochorismatase domain containing 2"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR000868
Pfam:PF00857 ZFIN:ZDB-GENE-070518-1 GO:GO:0003824
Gene3D:3.40.50.850 SUPFAM:SSF52499 GeneTree:ENSGT00390000006753
EMBL:CR848818 IPI:IPI00851335 Ensembl:ENSDART00000146997
ArrayExpress:E9QEF1 Bgee:E9QEF1 Uniprot:E9QEF1
Length = 176
Score = 79 (32.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 22/68 (32%), Positives = 34/68 (50%)
Query: 104 GADEVIEKNTYSAFG--NTRLQERLVGMG-VEEVIVCGVMTNLCCETTARDAFVRGFRVF 160
GA E ++ +T ++F +Q L MG ++VI+CG+ C TA D RG V
Sbjct: 69 GA-EGLKPHTKTSFSMMTESVQSSLKSMGDPQQVILCGIEAQACIACTAYDLLERGMEVH 127
Query: 161 FSTDATAT 168
DA ++
Sbjct: 128 IVADAVSS 135
Score = 61 (26.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 22 KSSVLLVIDMQNHFS-SIAK--PILDNTLATVQLCRRASIPVFFTRHCHK 68
K SVLL+ DMQ F +I + ++ N +Q CR +IP T K
Sbjct: 10 KGSVLLLCDMQEKFRPTIFQFTNVVSNAARLLQACRILNIPQILTEQYPK 59
>TIGR_CMR|BA_4482 [details] [associations]
symbol:BA_4482 "isochorismatase family protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0008152
"metabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=ISS] InterPro:IPR000868 Pfam:PF00857 GO:GO:0003824
EMBL:AE016879 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR Gene3D:3.40.50.850 SUPFAM:SSF52499
HOGENOM:HOG000078670 RefSeq:NP_846707.1 RefSeq:YP_030409.1
ProteinModelPortal:Q81LX7 DNASU:1087961
EnsemblBacteria:EBBACT00000009318 EnsemblBacteria:EBBACT00000023993
GeneID:1087961 GeneID:2851383 KEGG:ban:BA_4482 KEGG:bat:BAS4160
PATRIC:18786550 ProtClustDB:CLSK537105
BioCyc:BANT260799:GJAJ-4216-MONOMER Uniprot:Q81LX7
Length = 153
Score = 81 (33.6 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 28/96 (29%), Positives = 42/96 (43%)
Query: 81 NGDLVYDGTADAELLPEIKGL--------VAGADEVIEKNTYSAFGNTRLQERLVGMGVE 132
N +++ D +L+PE K L V D I K ++F T L E L + V+
Sbjct: 44 NKPIIFVQHCDDDLVPE-KELWAIHSDLDVQEQDFFIRKTHANSFFKTNLIEILDQLSVQ 102
Query: 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATAT 168
+ CG T C + T + A G+ F AT+T
Sbjct: 103 RIEFCGAQTEYCMDATIKFAHGLGYENFMVQKATST 138
Score = 54 (24.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 25 VLLVIDMQNHFSSIAKPILD--NTLATVQL----CRRASIPVFFTRHC 66
+L+VID+QN + + D N L V R+ + P+ F +HC
Sbjct: 6 ILIVIDLQNGVCYSEEHLFDLKNLLTKVNKRISSYRKLNKPIIFVQHC 53
>UNIPROTKB|G4MQX0 [details] [associations]
symbol:MGG_04726 "Isochorismatase family protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000868
InterPro:IPR005123 Pfam:PF00857 PROSITE:PS51471 GO:GO:0016706
Pfam:PF13532 EMBL:CM001231 Gene3D:3.40.50.850 SUPFAM:SSF52499
RefSeq:XP_003710813.1 ProteinModelPortal:G4MQX0
EnsemblFungi:MGG_04726T0 GeneID:2677810 KEGG:mgr:MGG_04726
Uniprot:G4MQX0
Length = 904
Score = 109 (43.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 31/99 (31%), Positives = 45/99 (45%)
Query: 83 DLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTN 142
+ V GT+ AEL+ E + + D + K YSAF + +L L E+ VCG +TN
Sbjct: 123 ECVRPGTSGAELVSEA-AVDSKRDSNLVKTQYSAFASGQLLPLLRTRLATELYVCGALTN 181
Query: 143 LCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNL 181
+ TA DA GF + D H ++NL
Sbjct: 182 VSIHATALDAASHGFAMTLVDDCCGYRSAARHANAVRNL 220
Score = 45 (20.9 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 9/12 (75%), Positives = 11/12 (91%)
Query: 26 LLVIDMQNHFSS 37
LLVID+QN F+S
Sbjct: 18 LLVIDLQNDFAS 29
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 201 201 0.00089 111 3 11 22 0.45 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 30
No. of states in DFA: 605 (64 KB)
Total size of DFA: 173 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.32u 0.21s 17.53t Elapsed: 00:00:01
Total cpu time: 17.32u 0.21s 17.53t Elapsed: 00:00:01
Start: Fri May 10 00:21:48 2013 End: Fri May 10 00:21:49 2013