Query 028963
Match_columns 201
No_of_seqs 182 out of 1068
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 08:15:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hb7_A Isochorismatase hydrola 100.0 1E-46 3.4E-51 295.1 19.5 175 19-200 3-188 (204)
2 3tg2_A Vibriobactin-specific i 100.0 4.4E-47 1.5E-51 300.4 15.9 177 18-200 23-207 (223)
3 3ot4_A Putative isochorismatas 100.0 2.4E-46 8.3E-51 298.4 17.3 193 6-200 27-228 (236)
4 3hu5_A Isochorismatase family 100.0 1E-45 3.5E-50 289.4 17.8 181 18-200 3-195 (204)
5 3irv_A Cysteine hydrolase; str 100.0 5.2E-46 1.8E-50 296.4 15.5 182 17-200 16-219 (233)
6 1nba_A N-carbamoylsarcosine am 100.0 1.1E-45 3.6E-50 299.2 17.2 190 8-199 29-232 (264)
7 3lqy_A Putative isochorismatas 100.0 3.3E-45 1.1E-49 283.6 18.2 169 18-198 2-190 (190)
8 3mcw_A Putative hydrolase; iso 100.0 3.3E-45 1.1E-49 285.2 18.0 170 18-200 7-193 (198)
9 3eef_A N-carbamoylsarcosine am 100.0 8.4E-46 2.9E-50 285.1 11.3 170 22-200 1-177 (182)
10 1nf9_A Phenazine biosynthesis 100.0 2.1E-45 7.1E-50 288.3 13.2 176 18-196 26-207 (207)
11 1j2r_A Hypothetical isochorism 100.0 3.6E-44 1.2E-48 279.6 19.1 177 18-198 14-199 (199)
12 3o94_A Nicotinamidase; hydrola 100.0 1.1E-44 3.9E-49 284.2 16.2 172 19-191 18-204 (211)
13 3oqp_A Putative isochorismatas 100.0 3E-44 1E-48 282.1 18.0 169 19-200 2-188 (211)
14 4h17_A Hydrolase, isochorismat 100.0 2.3E-44 7.8E-49 280.2 16.8 177 5-195 5-197 (197)
15 3kl2_A Putative isochorismatas 100.0 3.9E-45 1.3E-49 290.1 12.6 182 17-201 19-221 (226)
16 3txy_A Isochorismatase family 100.0 1.3E-43 4.4E-48 276.5 16.2 179 17-200 8-195 (199)
17 3gbc_A Pyrazinamidase/nicotina 100.0 4.8E-44 1.6E-48 276.1 11.8 164 24-191 2-185 (186)
18 3r2j_A Alpha/beta-hydrolase-li 100.0 8.5E-44 2.9E-48 282.2 13.0 180 15-199 26-225 (227)
19 1im5_A 180AA long hypothetical 100.0 1.6E-42 5.3E-47 266.3 19.4 164 22-190 2-179 (180)
20 2fq1_A Isochorismatase; ENTB, 100.0 2E-43 6.8E-48 289.7 14.5 177 18-197 27-211 (287)
21 2wt9_A Nicotinamidase; hydrola 100.0 4.3E-42 1.5E-46 274.2 17.3 172 20-198 27-235 (235)
22 2a67_A Isochorismatase family 100.0 3.5E-41 1.2E-45 255.9 17.6 153 22-191 3-167 (167)
23 3v8e_A Nicotinamidase; hydrola 100.0 6.8E-42 2.3E-46 269.7 10.9 166 24-190 2-215 (216)
24 1yac_A Ycacgp, YCAC gene produ 100.0 7.1E-41 2.4E-45 262.6 15.5 162 18-200 7-174 (208)
25 2b34_A F35G2.2, MAR1 ribonucle 100.0 6.8E-40 2.3E-44 255.3 13.5 159 18-200 9-170 (199)
26 1yzv_A Hypothetical protein; s 100.0 7.6E-40 2.6E-44 255.8 13.1 162 15-200 12-182 (204)
27 1x9g_A Putative MAR1; structur 100.0 7.3E-39 2.5E-43 249.5 17.0 159 15-200 12-178 (200)
28 3h7i_A Ribonuclease H, RNAse H 79.6 1.4 4.7E-05 35.6 3.3 43 121-163 111-153 (305)
29 1f2d_A 1-aminocyclopropane-1-c 74.5 6.4 0.00022 31.9 6.1 67 124-190 60-131 (341)
30 1j0a_A 1-aminocyclopropane-1-c 70.9 16 0.00055 29.2 7.7 59 127-190 66-124 (325)
31 4d9b_A D-cysteine desulfhydras 66.9 27 0.00093 28.1 8.3 65 127-191 77-143 (342)
32 1tzj_A ACC deaminase, 1-aminoc 65.8 13 0.00044 29.9 6.1 65 126-190 62-128 (338)
33 1exn_A 5'-exonuclease, 5'-nucl 58.5 7.1 0.00024 31.2 3.2 43 121-163 106-150 (290)
34 3pdw_A Uncharacterized hydrola 58.0 16 0.00054 27.7 5.1 41 24-65 6-46 (266)
35 3rkr_A Short chain oxidoreduct 57.7 39 0.0013 25.6 7.4 30 132-162 30-59 (262)
36 3nkl_A UDP-D-quinovosamine 4-d 57.7 17 0.0006 24.7 4.9 46 120-165 55-101 (141)
37 3uqz_A DNA processing protein 53.0 33 0.0011 27.3 6.2 63 132-199 217-281 (288)
38 4g81_D Putative hexonate dehyd 52.0 39 0.0013 26.1 6.5 48 131-184 9-56 (255)
39 3g8r_A Probable spore coat pol 51.4 43 0.0015 27.4 6.8 97 43-169 77-173 (350)
40 3u9l_A 3-oxoacyl-[acyl-carrier 51.1 43 0.0015 26.6 6.8 47 132-179 6-52 (324)
41 3t7c_A Carveol dehydrogenase; 50.4 62 0.0021 25.1 7.6 31 132-163 29-59 (299)
42 3epr_A Hydrolase, haloacid deh 50.2 14 0.00046 28.2 3.5 40 25-65 6-45 (264)
43 2pr7_A Haloacid dehalogenase/e 50.0 47 0.0016 21.7 6.0 110 26-164 4-119 (137)
44 1vp8_A Hypothetical protein AF 49.9 14 0.00047 27.8 3.3 69 124-197 37-110 (201)
45 3qiv_A Short-chain dehydrogena 48.6 69 0.0023 23.9 7.4 28 133-161 11-38 (253)
46 3nk6_A 23S rRNA methyltransfer 48.4 72 0.0024 25.0 7.6 76 121-198 110-188 (277)
47 3o38_A Short chain dehydrogena 48.3 48 0.0016 25.1 6.5 12 120-131 37-48 (266)
48 2f06_A Conserved hypothetical 47.2 31 0.0011 23.7 4.8 75 121-195 57-142 (144)
49 3uve_A Carveol dehydrogenase ( 46.6 79 0.0027 24.2 7.6 53 131-184 11-74 (286)
50 1hjs_A Beta-1,4-galactanase; 4 46.5 53 0.0018 26.4 6.7 43 120-162 30-79 (332)
51 3tfo_A Putative 3-oxoacyl-(acy 45.2 62 0.0021 24.7 6.7 30 132-162 5-34 (264)
52 2wqp_A Polysialic acid capsule 44.9 35 0.0012 27.9 5.3 97 43-169 90-186 (349)
53 4imr_A 3-oxoacyl-(acyl-carrier 44.4 57 0.0019 25.1 6.4 33 129-162 31-63 (275)
54 3maj_A DNA processing chain A; 44.2 1.1E+02 0.0038 25.3 8.3 134 43-190 74-213 (382)
55 3ucx_A Short chain dehydrogena 44.0 74 0.0025 24.1 7.0 29 132-161 12-40 (264)
56 3tjr_A Short chain dehydrogena 43.9 59 0.002 25.3 6.5 25 115-140 40-64 (301)
57 2f9i_B Acetyl-coenzyme A carbo 43.9 41 0.0014 26.7 5.4 41 27-67 124-166 (285)
58 3bh0_A DNAB-like replicative h 43.6 39 0.0013 26.8 5.4 43 26-68 184-232 (315)
59 2vqe_B 30S ribosomal protein S 42.7 29 0.00098 27.2 4.3 35 24-70 160-194 (256)
60 4fn4_A Short chain dehydrogena 42.7 57 0.002 25.1 6.1 48 131-184 7-54 (254)
61 2qq5_A DHRS1, dehydrogenase/re 41.7 81 0.0028 23.7 6.8 28 133-161 7-34 (260)
62 4amu_A Ornithine carbamoyltran 41.4 1.2E+02 0.0042 24.9 8.1 67 131-197 180-248 (365)
63 3dwv_A Glutathione peroxidase- 41.0 42 0.0014 24.0 4.8 40 26-65 48-87 (187)
64 1vi6_A 30S ribosomal protein S 40.9 41 0.0014 25.4 4.8 35 24-70 117-151 (208)
65 1qwg_A PSL synthase;, (2R)-pho 40.7 52 0.0018 25.6 5.4 66 124-190 62-132 (251)
66 4iiu_A 3-oxoacyl-[acyl-carrier 40.4 71 0.0024 24.2 6.3 30 132-162 27-56 (267)
67 4ibo_A Gluconate dehydrogenase 40.3 89 0.0031 23.8 7.0 19 119-138 39-57 (271)
68 3bbn_B Ribosomal protein S2; s 39.8 41 0.0014 25.8 4.7 35 24-70 159-193 (231)
69 3gd5_A Otcase, ornithine carba 39.7 1.3E+02 0.0045 24.2 7.9 62 131-193 157-218 (323)
70 2dr3_A UPF0273 protein PH0284; 38.9 72 0.0024 23.4 6.1 46 24-69 129-175 (247)
71 3io5_A Recombination and repai 38.9 65 0.0022 26.2 5.9 50 19-68 107-173 (333)
72 2jah_A Clavulanic acid dehydro 38.6 1.1E+02 0.0038 22.8 7.1 30 132-162 8-37 (247)
73 3bch_A 40S ribosomal protein S 38.5 46 0.0016 26.0 4.8 35 24-70 153-187 (253)
74 3ksu_A 3-oxoacyl-acyl carrier 38.1 76 0.0026 24.0 6.2 30 132-162 12-41 (262)
75 3sju_A Keto reductase; short-c 37.9 1.1E+02 0.0037 23.4 7.1 30 132-162 25-54 (279)
76 3oec_A Carveol dehydrogenase ( 37.3 1.2E+02 0.004 23.8 7.3 32 130-162 45-76 (317)
77 2nwq_A Probable short-chain de 37.3 37 0.0013 26.1 4.3 30 132-162 22-51 (272)
78 1ae1_A Tropinone reductase-I; 37.2 1.1E+02 0.0039 23.1 7.1 30 132-162 22-51 (273)
79 4a1f_A DNAB helicase, replicat 37.1 39 0.0013 27.4 4.4 47 23-69 156-208 (338)
80 3llv_A Exopolyphosphatase-rela 37.0 40 0.0014 22.7 4.0 30 132-163 7-36 (141)
81 4dgk_A Phytoene dehydrogenase; 36.7 30 0.001 28.9 3.9 31 132-164 2-32 (501)
82 1vli_A Spore coat polysacchari 36.4 40 0.0014 28.0 4.4 50 119-169 147-197 (385)
83 3o26_A Salutaridine reductase; 36.2 82 0.0028 24.1 6.2 30 132-162 13-42 (311)
84 4h27_A L-serine dehydratase/L- 36.1 97 0.0033 25.1 6.8 57 126-190 88-144 (364)
85 3fwz_A Inner membrane protein 36.1 45 0.0015 22.7 4.1 36 119-160 19-54 (140)
86 2nu8_A Succinyl-COA ligase [AD 36.0 1.5E+02 0.0053 23.1 8.4 64 121-188 55-118 (288)
87 2p5q_A Glutathione peroxidase 36.0 45 0.0015 22.9 4.2 40 26-65 34-73 (170)
88 2v1m_A Glutathione peroxidase; 36.0 45 0.0015 22.9 4.2 40 26-65 33-72 (169)
89 1vlj_A NADH-dependent butanol 36.0 1.4E+02 0.0048 24.5 7.8 78 120-197 32-122 (407)
90 4ggo_A Trans-2-enoyl-COA reduc 35.9 1.2E+02 0.0042 25.2 7.3 35 129-163 48-82 (401)
91 3bfj_A 1,3-propanediol oxidore 35.8 1.6E+02 0.0054 23.9 8.1 64 121-184 23-91 (387)
92 3f9r_A Phosphomannomutase; try 35.7 49 0.0017 25.1 4.7 41 24-64 4-44 (246)
93 1c1d_A L-phenylalanine dehydro 35.6 1.7E+02 0.0059 23.8 8.1 64 121-195 160-228 (355)
94 3lyl_A 3-oxoacyl-(acyl-carrier 35.5 1.2E+02 0.004 22.5 6.8 28 133-161 7-34 (247)
95 1gz6_A Estradiol 17 beta-dehyd 35.5 1.3E+02 0.0044 23.6 7.4 30 132-162 10-39 (319)
96 2ae2_A Protein (tropinone redu 35.4 1.4E+02 0.0047 22.3 7.5 30 132-162 10-39 (260)
97 3tsc_A Putative oxidoreductase 35.3 1.4E+02 0.0049 22.5 7.6 32 131-163 11-42 (277)
98 3awd_A GOX2181, putative polyo 35.0 1.2E+02 0.0041 22.5 6.8 24 115-139 22-45 (260)
99 3pgx_A Carveol dehydrogenase; 35.0 1.5E+02 0.005 22.5 7.6 31 131-162 15-45 (280)
100 3kij_A Probable glutathione pe 35.0 43 0.0015 23.7 4.0 39 26-64 40-78 (180)
101 1wma_A Carbonyl reductase [NAD 35.0 89 0.0031 23.3 6.1 15 117-131 15-30 (276)
102 4ep1_A Otcase, ornithine carba 34.9 1.7E+02 0.0059 23.7 7.9 58 131-189 179-236 (340)
103 1xpj_A Hypothetical protein; s 34.8 52 0.0018 22.1 4.2 39 26-64 3-47 (126)
104 3n4j_A RNA methyltransferase; 34.7 1.2E+02 0.004 21.6 6.3 67 133-199 6-74 (165)
105 3vqt_A RF-3, peptide chain rel 34.7 26 0.0009 30.4 3.2 41 17-64 119-159 (548)
106 2o8r_A Polyphosphate kinase; s 34.6 49 0.0017 29.8 5.0 83 105-190 343-431 (705)
107 3i1j_A Oxidoreductase, short c 34.5 96 0.0033 22.9 6.2 19 119-138 27-45 (247)
108 4dry_A 3-oxoacyl-[acyl-carrier 34.4 61 0.0021 25.0 5.1 31 131-162 33-63 (281)
109 1geg_A Acetoin reductase; SDR 34.4 1.3E+02 0.0044 22.4 7.0 28 133-161 4-31 (256)
110 2cvh_A DNA repair and recombin 34.4 93 0.0032 22.3 6.0 46 23-68 105-157 (220)
111 3qgm_A P-nitrophenyl phosphata 34.2 34 0.0012 25.8 3.5 40 25-65 9-48 (268)
112 3ftp_A 3-oxoacyl-[acyl-carrier 34.0 81 0.0028 24.1 5.8 31 131-162 28-58 (270)
113 3oid_A Enoyl-[acyl-carrier-pro 33.8 98 0.0034 23.3 6.2 29 132-161 5-33 (258)
114 2zat_A Dehydrogenase/reductase 33.7 1.3E+02 0.0044 22.5 6.9 28 133-161 16-43 (260)
115 3ics_A Coenzyme A-disulfide re 33.7 2.2E+02 0.0077 24.3 9.3 64 126-191 182-248 (588)
116 2bc0_A NADH oxidase; flavoprot 33.6 2.1E+02 0.0071 23.8 8.8 62 129-192 192-257 (490)
117 3pk0_A Short-chain dehydrogena 33.3 98 0.0033 23.4 6.1 30 132-162 11-40 (262)
118 3v8b_A Putative dehydrogenase, 33.3 1.1E+02 0.0038 23.5 6.5 30 132-162 29-58 (283)
119 4e3z_A Putative oxidoreductase 33.2 1.5E+02 0.0051 22.3 7.2 29 132-161 27-55 (272)
120 1we0_A Alkyl hydroperoxide red 33.1 79 0.0027 22.3 5.3 40 26-65 33-73 (187)
121 3tbh_A O-acetyl serine sulfhyd 33.1 1.3E+02 0.0044 24.0 7.0 60 125-191 61-124 (334)
122 1fmc_A 7 alpha-hydroxysteroid 33.0 1.1E+02 0.0039 22.5 6.4 25 114-139 19-43 (255)
123 1q57_A DNA primase/helicase; d 32.9 73 0.0025 26.9 5.7 46 23-68 354-405 (503)
124 1wr8_A Phosphoglycolate phosph 32.9 50 0.0017 24.4 4.3 39 26-64 5-43 (231)
125 2p31_A CL683, glutathione pero 32.9 53 0.0018 23.2 4.2 40 26-65 51-90 (181)
126 3h7a_A Short chain dehydrogena 32.6 1E+02 0.0036 23.1 6.1 30 132-162 8-37 (252)
127 3maj_A DNA processing chain A; 32.6 67 0.0023 26.6 5.2 64 132-199 238-302 (382)
128 3imf_A Short chain dehydrogena 32.6 82 0.0028 23.7 5.5 29 132-161 7-35 (257)
129 3hcz_A Possible thiol-disulfid 32.5 54 0.0019 21.7 4.1 41 26-66 33-73 (148)
130 1t57_A Conserved protein MTH16 32.3 28 0.00095 26.2 2.5 67 124-196 45-116 (206)
131 2vup_A Glutathione peroxidase- 32.2 61 0.0021 23.1 4.5 41 26-66 50-90 (190)
132 1yb1_A 17-beta-hydroxysteroid 32.2 1.5E+02 0.005 22.4 7.0 26 113-139 38-63 (272)
133 1mkz_A Molybdenum cofactor bio 32.2 83 0.0028 22.6 5.2 58 120-178 31-91 (172)
134 1jzt_A Hypothetical 27.5 kDa p 32.0 1.2E+02 0.0041 23.2 6.3 58 131-189 59-117 (246)
135 3is3_A 17BETA-hydroxysteroid d 32.0 1.1E+02 0.0037 23.2 6.2 29 132-161 19-47 (270)
136 2v03_A Cysteine synthase B; py 32.0 1.6E+02 0.0053 23.0 7.2 57 127-191 53-113 (303)
137 1u7z_A Coenzyme A biosynthesis 31.9 77 0.0026 24.1 5.1 34 131-164 8-56 (226)
138 3tox_A Short chain dehydrogena 31.8 1.2E+02 0.0043 23.2 6.5 29 132-161 9-37 (280)
139 3ioy_A Short-chain dehydrogena 31.8 1.2E+02 0.0041 23.8 6.6 28 133-161 10-37 (319)
140 1agx_A Glutaminase-asparaginas 31.7 2E+02 0.0068 23.1 8.4 51 119-169 228-282 (331)
141 2lrn_A Thiol:disulfide interch 31.6 55 0.0019 22.1 4.0 40 26-65 31-70 (152)
142 3hs2_A PHD protein, prevent HO 31.5 54 0.0018 18.9 3.4 26 41-67 8-33 (58)
143 3l77_A Short-chain alcohol deh 31.3 1.2E+02 0.0043 22.1 6.3 30 132-162 3-32 (235)
144 3cgb_A Pyridine nucleotide-dis 31.2 2.3E+02 0.0078 23.5 8.9 60 130-191 185-247 (480)
145 3gkn_A Bacterioferritin comigr 31.1 53 0.0018 22.5 3.9 41 26-66 37-78 (163)
146 2yqu_A 2-oxoglutarate dehydrog 30.7 2.2E+02 0.0074 23.4 8.2 59 131-191 167-228 (455)
147 3fw2_A Thiol-disulfide oxidore 30.6 54 0.0018 22.1 3.8 41 26-66 35-78 (150)
148 1xp8_A RECA protein, recombina 30.6 81 0.0028 25.7 5.4 48 22-69 151-213 (366)
149 3bgw_A DNAB-like replicative h 30.5 79 0.0027 26.5 5.5 43 26-68 313-361 (444)
150 3r8n_B 30S ribosomal protein S 30.2 49 0.0017 25.2 3.7 36 23-70 150-185 (218)
151 3svt_A Short-chain type dehydr 30.2 1.6E+02 0.0056 22.3 7.0 30 132-162 12-41 (281)
152 2yfk_A Aspartate/ornithine car 30.2 2.4E+02 0.0083 23.5 9.1 65 133-197 190-260 (418)
153 1id1_A Putative potassium chan 30.1 63 0.0022 22.1 4.2 13 150-162 20-32 (153)
154 1v59_A Dihydrolipoamide dehydr 30.0 2.3E+02 0.008 23.3 8.6 59 131-191 183-244 (478)
155 2w3q_A Carbonic anhydrase 2; l 30.0 1.3E+02 0.0045 23.0 6.2 47 103-149 86-138 (243)
156 3edm_A Short chain dehydrogena 29.9 1.1E+02 0.0037 23.0 5.8 31 131-162 8-38 (259)
157 1zye_A Thioredoxin-dependent p 29.9 81 0.0028 23.3 5.0 41 26-66 58-99 (220)
158 1byr_A Protein (endonuclease); 29.8 1.3E+02 0.0045 20.4 8.0 66 122-189 19-85 (155)
159 1qop_B Tryptophan synthase bet 29.8 84 0.0029 25.7 5.4 61 127-191 98-158 (396)
160 3orf_A Dihydropteridine reduct 29.8 1.7E+02 0.0059 21.7 7.2 51 132-183 23-83 (251)
161 4da9_A Short-chain dehydrogena 29.6 1.6E+02 0.0056 22.4 6.9 15 147-161 44-58 (280)
162 4h31_A Otcase, ornithine carba 29.6 1.6E+02 0.0055 24.0 7.0 66 132-197 182-247 (358)
163 3cea_A MYO-inositol 2-dehydrog 29.4 2E+02 0.007 22.5 9.0 61 120-184 61-121 (346)
164 3gv0_A Transcriptional regulat 29.4 1.8E+02 0.0061 21.8 8.1 41 121-164 57-97 (288)
165 3gaf_A 7-alpha-hydroxysteroid 29.3 1.1E+02 0.0037 23.0 5.7 20 119-139 25-44 (256)
166 3fj1_A Putative phosphosugar i 29.3 49 0.0017 26.7 3.8 41 122-162 34-76 (344)
167 4h15_A Short chain alcohol deh 29.0 1.1E+02 0.0038 23.4 5.8 34 130-164 10-43 (261)
168 1mgp_A Hypothetical protein TM 29.0 1.7E+02 0.0057 23.3 6.9 70 126-198 103-174 (313)
169 2h01_A 2-Cys peroxiredoxin; th 28.9 80 0.0027 22.5 4.7 40 26-65 33-73 (192)
170 3ntd_A FAD-dependent pyridine 28.9 2.6E+02 0.009 23.5 10.1 65 125-191 145-212 (565)
171 2f8a_A Glutathione peroxidase 28.8 66 0.0022 23.6 4.2 40 26-65 49-88 (208)
172 2j13_A Polysaccharide deacetyl 28.8 96 0.0033 23.6 5.3 77 119-197 159-244 (247)
173 1xq1_A Putative tropinone redu 28.8 1.5E+02 0.0053 22.0 6.5 25 113-138 21-45 (266)
174 1xg5_A ARPG836; short chain de 28.7 1.6E+02 0.0055 22.2 6.7 17 115-131 41-57 (279)
175 4d9i_A Diaminopropionate ammon 28.5 1.9E+02 0.0065 23.6 7.4 50 134-190 114-163 (398)
176 3hl0_A Maleylacetate reductase 28.5 2.3E+02 0.0079 22.8 8.0 64 120-185 23-87 (353)
177 3f1l_A Uncharacterized oxidore 28.5 1.1E+02 0.0038 22.8 5.7 30 132-162 13-42 (252)
178 2q6t_A DNAB replication FORK h 28.5 74 0.0025 26.5 4.9 46 23-68 310-364 (444)
179 3ged_A Short-chain dehydrogena 28.5 68 0.0023 24.6 4.4 30 132-162 3-32 (247)
180 1pvv_A Otcase, ornithine carba 28.5 2.3E+02 0.0077 22.7 9.1 103 92-198 112-221 (315)
181 1zem_A Xylitol dehydrogenase; 28.4 1.8E+02 0.0062 21.7 6.9 30 132-162 8-37 (262)
182 2rhc_B Actinorhodin polyketide 28.2 1.9E+02 0.0064 21.9 7.0 26 113-139 29-54 (277)
183 3cmi_A Peroxiredoxin HYR1; thi 28.2 60 0.0021 22.6 3.8 39 26-65 34-72 (171)
184 1oj7_A Hypothetical oxidoreduc 28.1 1.3E+02 0.0046 24.6 6.4 76 120-197 41-127 (408)
185 1rkq_A Hypothetical protein YI 28.1 62 0.0021 24.8 4.1 40 25-64 6-45 (282)
186 1xkq_A Short-chain reductase f 28.0 1.5E+02 0.0051 22.5 6.4 30 132-162 7-36 (280)
187 2obi_A PHGPX, GPX-4, phospholi 28.0 71 0.0024 22.5 4.2 40 26-65 49-88 (183)
188 1zof_A Alkyl hydroperoxide-red 27.9 81 0.0028 22.6 4.6 40 26-65 35-75 (198)
189 2zkq_b 40S ribosomal protein S 27.9 56 0.0019 26.1 3.8 35 24-70 120-154 (295)
190 3sx2_A Putative 3-ketoacyl-(ac 27.9 1.9E+02 0.0066 21.7 7.7 30 132-162 14-43 (278)
191 1z2i_A Malate dehydrogenase; s 27.7 53 0.0018 26.9 3.7 45 22-68 81-125 (358)
192 3i28_A Epoxide hydrolase 2; ar 27.7 1.9E+02 0.0064 23.6 7.4 62 121-182 107-174 (555)
193 1vlv_A Otcase, ornithine carba 27.6 2.4E+02 0.0082 22.7 8.7 66 132-197 168-233 (325)
194 3eur_A Uncharacterized protein 27.5 53 0.0018 21.9 3.3 40 26-65 33-75 (142)
195 3j20_B 30S ribosomal protein S 27.5 74 0.0025 23.8 4.2 35 24-70 113-147 (202)
196 3klj_A NAD(FAD)-dependent dehy 27.5 1.3E+02 0.0044 24.4 6.2 59 131-191 146-208 (385)
197 2jgq_A Triosephosphate isomera 27.4 1.6E+02 0.0056 22.4 6.3 56 109-164 60-122 (233)
198 3ibt_A 1H-3-hydroxy-4-oxoquino 27.4 1.1E+02 0.0038 22.0 5.4 48 120-167 75-123 (264)
199 1ges_A Glutathione reductase; 27.4 2.6E+02 0.0088 23.0 8.3 59 131-191 167-228 (450)
200 3nyw_A Putative oxidoreductase 27.4 1.2E+02 0.004 22.8 5.6 30 132-162 8-37 (250)
201 1zmd_A Dihydrolipoyl dehydroge 27.4 2.6E+02 0.0089 23.0 8.7 59 131-191 178-240 (474)
202 2o2s_A Enoyl-acyl carrier redu 27.3 74 0.0025 24.8 4.5 31 132-162 10-41 (315)
203 2pwj_A Mitochondrial peroxired 27.3 1.1E+02 0.0036 21.6 5.0 41 25-65 45-87 (171)
204 2bmx_A Alkyl hydroperoxidase C 27.3 79 0.0027 22.6 4.4 40 26-65 47-87 (195)
205 3pgv_A Haloacid dehalogenase-l 27.3 58 0.002 24.9 3.8 46 19-64 16-61 (285)
206 3kty_A Probable methyltransfer 27.3 1.6E+02 0.0054 21.0 6.0 65 132-198 11-82 (173)
207 2eq6_A Pyruvate dehydrogenase 27.3 2.6E+02 0.009 23.0 8.6 59 131-191 169-230 (464)
208 3e82_A Putative oxidoreductase 27.2 2.4E+02 0.0081 22.5 8.9 63 120-186 57-119 (364)
209 3fkf_A Thiol-disulfide oxidore 27.1 59 0.002 21.5 3.5 40 26-65 35-75 (148)
210 1nhp_A NADH peroxidase; oxidor 27.1 2.6E+02 0.0088 22.8 9.5 60 130-191 148-211 (447)
211 2c0d_A Thioredoxin peroxidase 27.1 80 0.0027 23.5 4.5 40 26-65 58-98 (221)
212 4a3s_A 6-phosphofructokinase; 27.1 51 0.0018 26.5 3.5 39 122-163 85-123 (319)
213 3qlj_A Short chain dehydrogena 27.1 1.6E+02 0.0055 22.9 6.5 30 132-162 28-57 (322)
214 2xzm_B RPS0E; ribosome, transl 27.0 57 0.0019 25.2 3.6 35 24-70 116-150 (241)
215 2lrt_A Uncharacterized protein 26.9 46 0.0016 22.8 2.9 40 26-65 37-76 (152)
216 1wkv_A Cysteine synthase; homo 26.9 2E+02 0.0067 23.6 7.2 50 133-189 146-195 (389)
217 2r9z_A Glutathione amide reduc 26.8 2.7E+02 0.0092 23.0 8.6 59 131-191 166-227 (463)
218 3rih_A Short chain dehydrogena 26.8 73 0.0025 24.8 4.4 30 132-162 42-71 (293)
219 1u94_A RECA protein, recombina 26.7 64 0.0022 26.2 4.1 47 23-69 141-202 (356)
220 4dmm_A 3-oxoacyl-[acyl-carrier 26.7 1.6E+02 0.0056 22.2 6.4 15 117-131 39-53 (269)
221 1ojt_A Surface protein; redox- 26.6 2.4E+02 0.0081 23.4 7.8 59 131-191 185-246 (482)
222 3ai3_A NADPH-sorbose reductase 26.6 2E+02 0.0067 21.4 6.8 30 132-162 8-37 (263)
223 2zsj_A Threonine synthase; PLP 26.5 2.1E+02 0.0073 22.8 7.3 58 126-190 74-131 (352)
224 3gl3_A Putative thiol:disulfid 26.5 61 0.0021 21.7 3.5 41 26-66 30-70 (152)
225 2r6a_A DNAB helicase, replicat 26.4 1E+02 0.0035 25.7 5.4 47 23-69 313-366 (454)
226 1wsa_A Asparaginase, asparagin 26.1 2.5E+02 0.0086 22.4 8.6 60 107-168 218-280 (330)
227 3rd5_A Mypaa.01249.C; ssgcid, 26.0 79 0.0027 24.3 4.4 30 132-162 17-46 (291)
228 1lc0_A Biliverdin reductase A; 26.0 2.3E+02 0.0078 21.9 7.5 63 120-186 55-117 (294)
229 2gs3_A PHGPX, GPX-4, phospholi 25.9 82 0.0028 22.3 4.2 40 26-65 51-90 (185)
230 3ka7_A Oxidoreductase; structu 25.9 85 0.0029 25.3 4.8 30 133-164 2-31 (425)
231 2ptg_A Enoyl-acyl carrier redu 25.9 85 0.0029 24.5 4.6 32 131-162 9-41 (319)
232 1iy8_A Levodione reductase; ox 25.9 1.9E+02 0.0064 21.7 6.6 30 132-162 14-43 (267)
233 2pq0_A Hypothetical conserved 25.8 71 0.0024 23.8 4.0 39 26-64 5-43 (258)
234 3v2g_A 3-oxoacyl-[acyl-carrier 25.8 2E+02 0.0068 21.8 6.7 30 132-162 32-61 (271)
235 3osu_A 3-oxoacyl-[acyl-carrier 25.7 1.5E+02 0.005 22.0 5.9 29 132-161 5-33 (246)
236 1n0w_A DNA repair protein RAD5 25.7 1.3E+02 0.0043 22.0 5.4 47 22-68 118-175 (243)
237 3hba_A Putative phosphosugar i 25.7 44 0.0015 26.9 2.9 42 122-163 33-76 (334)
238 2d1c_A Isocitrate dehydrogenas 25.6 52 0.0018 28.3 3.4 31 20-54 383-413 (496)
239 4fs3_A Enoyl-[acyl-carrier-pro 25.6 91 0.0031 23.6 4.6 33 130-162 5-38 (256)
240 3aey_A Threonine synthase; PLP 25.6 2.4E+02 0.0083 22.4 7.4 58 126-190 72-129 (351)
241 1vl8_A Gluconate 5-dehydrogena 25.5 2E+02 0.0067 21.7 6.6 26 113-139 28-53 (267)
242 1xvi_A MPGP, YEDP, putative ma 25.5 48 0.0017 25.4 3.0 42 23-64 8-49 (275)
243 3cxt_A Dehydrogenase with diff 25.4 1.5E+02 0.0052 22.8 6.0 29 132-161 35-63 (291)
244 3u9r_B MCC beta, methylcrotony 25.4 81 0.0028 27.5 4.7 44 23-66 122-165 (555)
245 3oig_A Enoyl-[acyl-carrier-pro 25.4 93 0.0032 23.4 4.7 31 132-162 8-39 (266)
246 2o8n_A APOA-I binding protein; 25.3 1.6E+02 0.0055 22.9 6.0 56 132-189 81-137 (265)
247 2h7i_A Enoyl-[acyl-carrier-pro 25.3 85 0.0029 23.8 4.4 31 132-162 8-39 (269)
248 1duv_G Octase-1, ornithine tra 25.2 2.6E+02 0.009 22.5 7.4 104 92-198 110-222 (333)
249 2b30_A Pvivax hypothetical pro 25.1 78 0.0027 24.6 4.3 41 24-64 27-68 (301)
250 1xrh_A Ureidoglycolate dehydro 25.0 51 0.0017 27.0 3.2 45 22-68 74-118 (351)
251 1yya_A Triosephosphate isomera 25.0 1.7E+02 0.0059 22.6 6.0 54 111-164 67-127 (250)
252 2w37_A Ornithine carbamoyltran 24.9 2.7E+02 0.0093 22.7 7.5 65 132-196 177-241 (359)
253 1nxu_A Hypothetical oxidoreduc 24.8 61 0.0021 26.3 3.6 44 23-68 73-116 (333)
254 3kux_A Putative oxidoreductase 24.8 2.6E+02 0.0088 22.1 8.7 63 120-186 57-119 (352)
255 3guy_A Short-chain dehydrogena 24.8 66 0.0023 23.7 3.6 29 133-162 3-31 (230)
256 1vbi_A Type 2 malate/lactate d 24.7 61 0.0021 26.4 3.6 43 24-68 73-115 (344)
257 3u5t_A 3-oxoacyl-[acyl-carrier 24.7 1.2E+02 0.0042 23.0 5.3 31 131-162 27-57 (267)
258 3d3j_A Enhancer of mRNA-decapp 24.6 2.6E+02 0.0089 22.1 7.5 57 132-189 134-191 (306)
259 2zjr_L 50S ribosomal protein L 24.6 59 0.002 22.0 2.9 39 120-158 73-113 (114)
260 3hry_A PHD protein, prevent HO 24.6 95 0.0033 18.8 3.7 27 41-68 8-34 (73)
261 2uvd_A 3-oxoacyl-(acyl-carrier 24.6 2.1E+02 0.0073 21.0 6.6 15 147-161 19-33 (246)
262 1vs1_A 3-deoxy-7-phosphoheptul 24.6 1.8E+02 0.0062 22.7 6.2 66 119-184 134-205 (276)
263 3ek2_A Enoyl-(acyl-carrier-pro 24.5 95 0.0033 23.2 4.6 24 116-140 26-49 (271)
264 3e5y_A TRMH family RNA methylt 24.5 1.9E+02 0.0064 20.3 6.3 67 133-199 7-75 (160)
265 1l6r_A Hypothetical protein TA 24.5 47 0.0016 24.7 2.7 40 25-64 6-45 (227)
266 2rkb_A Serine dehydratase-like 24.5 2.5E+02 0.0086 21.9 7.3 55 128-190 51-105 (318)
267 1gee_A Glucose 1-dehydrogenase 24.4 2.1E+02 0.0073 21.0 7.0 28 133-161 9-36 (261)
268 1yzy_A Hypothetical protein HI 24.4 3E+02 0.01 22.7 8.8 136 39-178 55-211 (413)
269 2i6u_A Otcase, ornithine carba 24.3 2.7E+02 0.0092 22.1 8.8 100 92-194 105-211 (307)
270 1o58_A O-acetylserine sulfhydr 24.2 2E+02 0.0068 22.3 6.6 56 127-190 59-116 (303)
271 3t4x_A Oxidoreductase, short c 24.2 1.7E+02 0.0058 22.0 6.0 30 132-162 11-40 (267)
272 3q98_A Transcarbamylase; rossm 24.2 3.1E+02 0.01 22.7 7.9 66 133-198 193-264 (399)
273 1xzo_A BSSCO, hypothetical pro 24.1 1.4E+02 0.0047 20.4 5.1 41 26-66 35-78 (174)
274 3drn_A Peroxiredoxin, bacterio 24.1 47 0.0016 22.9 2.5 39 27-65 32-71 (161)
275 1r2r_A TIM, triosephosphate is 24.0 1.8E+02 0.0063 22.4 6.0 55 111-165 68-129 (248)
276 1rlm_A Phosphatase; HAD family 24.0 65 0.0022 24.4 3.5 39 26-64 5-44 (271)
277 3uhj_A Probable glycerol dehyd 24.0 1.4E+02 0.0047 24.5 5.7 64 120-184 42-105 (387)
278 1qsg_A Enoyl-[acyl-carrier-pro 23.9 95 0.0032 23.4 4.5 31 132-162 10-41 (265)
279 3r1i_A Short-chain type dehydr 23.9 1E+02 0.0036 23.5 4.8 22 117-139 43-64 (276)
280 1v77_A PH1877P, hypothetical p 23.9 67 0.0023 23.9 3.5 28 42-69 145-172 (212)
281 3ius_A Uncharacterized conserv 23.9 85 0.0029 23.7 4.2 16 116-131 14-29 (286)
282 3gpi_A NAD-dependent epimerase 23.8 84 0.0029 23.8 4.2 31 132-164 4-34 (286)
283 1v9n_A Malate dehydrogenase; r 23.8 65 0.0022 26.4 3.6 45 22-68 83-127 (360)
284 4hb9_A Similarities with proba 23.8 1E+02 0.0034 24.5 4.8 31 133-165 3-33 (412)
285 1pfk_A Phosphofructokinase; tr 23.6 1.4E+02 0.0048 24.0 5.5 104 42-163 17-124 (320)
286 3dme_A Conserved exported prot 23.6 96 0.0033 24.1 4.6 31 133-165 6-36 (369)
287 3i0p_A Malate dehydrogenase; a 23.6 72 0.0025 26.2 3.8 45 22-68 79-123 (365)
288 4fn5_A EF-G 1, elongation fact 23.5 67 0.0023 28.7 3.9 38 20-64 107-144 (709)
289 1dxh_A Ornithine carbamoyltran 23.5 2.9E+02 0.01 22.2 7.8 105 91-198 110-222 (335)
290 2d1f_A Threonine synthase; ami 23.5 2.8E+02 0.0097 22.1 8.1 58 126-190 80-137 (360)
291 2gk4_A Conserved hypothetical 23.5 1.2E+02 0.0041 23.2 4.8 35 132-166 4-53 (232)
292 3bzy_B ESCU; auto cleavage pro 23.5 60 0.002 20.6 2.6 21 44-64 27-47 (83)
293 2p91_A Enoyl-[acyl-carrier-pro 23.4 96 0.0033 23.7 4.5 31 132-162 22-53 (285)
294 3eua_A Putative fructose-amino 23.4 49 0.0017 26.4 2.8 43 122-164 16-61 (329)
295 3e3i_A Carbonic anhydrase 2, b 23.4 2.1E+02 0.007 21.8 6.1 47 103-149 56-108 (229)
296 3u5c_A 40S ribosomal protein S 23.4 1E+02 0.0036 23.9 4.5 35 24-70 119-153 (252)
297 1x0u_A Hypothetical methylmalo 23.4 1.1E+02 0.0039 26.3 5.2 29 39-67 342-370 (522)
298 1wtj_A Ureidoglycolate dehydro 23.3 62 0.0021 26.4 3.4 44 23-68 83-126 (343)
299 2pd4_A Enoyl-[acyl-carrier-pro 23.2 1E+02 0.0034 23.4 4.5 31 132-162 7-38 (275)
300 2gf3_A MSOX, monomeric sarcosi 23.2 98 0.0033 24.5 4.6 30 133-164 5-34 (389)
301 3kbb_A Phosphorylated carbohyd 23.2 99 0.0034 21.9 4.3 62 121-182 91-154 (216)
302 3u5r_E Uncharacterized protein 23.2 49 0.0017 24.4 2.6 40 26-65 61-100 (218)
303 3egl_A DEGV family protein; al 23.2 2.6E+02 0.0091 21.6 7.7 73 123-198 55-130 (277)
304 2hqm_A GR, grase, glutathione 23.0 3.2E+02 0.011 22.6 8.3 60 130-191 184-246 (479)
305 3lwa_A Secreted thiol-disulfid 23.0 83 0.0028 22.0 3.8 41 26-66 61-107 (183)
306 3onp_A TRNA/RRNA methyltransfe 23.0 2.2E+02 0.0075 21.8 6.4 64 133-198 6-74 (249)
307 2rbk_A Putative uncharacterize 23.0 89 0.0031 23.4 4.1 39 26-64 4-43 (261)
308 1ekj_A Beta-carbonic anhydrase 22.9 2.1E+02 0.0072 21.4 6.2 47 103-149 66-122 (221)
309 3ucj_A Carbonic anhydrase; alp 22.9 2.3E+02 0.008 21.4 6.4 47 103-149 61-113 (227)
310 2is8_A Molybdopterin biosynthe 22.8 1.2E+02 0.004 21.5 4.5 60 120-180 24-86 (164)
311 1mo0_A TIM, triosephosphate is 22.8 2E+02 0.0067 22.6 6.0 55 111-165 87-148 (275)
312 3grk_A Enoyl-(acyl-carrier-pro 22.7 1.2E+02 0.004 23.5 4.8 31 132-162 32-63 (293)
313 1ryi_A Glycine oxidase; flavop 22.7 1E+02 0.0035 24.4 4.6 31 133-165 19-49 (382)
314 3ewl_A Uncharacterized conserv 22.7 68 0.0023 21.2 3.1 40 26-65 29-71 (142)
315 2j6p_A SB(V)-AS(V) reductase; 22.6 1E+02 0.0034 21.3 4.1 44 122-165 59-109 (152)
316 1lvl_A Dihydrolipoamide dehydr 22.6 2.7E+02 0.0094 22.8 7.4 59 131-191 171-232 (458)
317 3ppi_A 3-hydroxyacyl-COA dehyd 22.5 2.1E+02 0.007 21.6 6.2 20 119-139 43-62 (281)
318 2i81_A 2-Cys peroxiredoxin; st 22.5 74 0.0025 23.4 3.5 40 26-65 54-94 (213)
319 1vrg_A Propionyl-COA carboxyla 22.5 94 0.0032 26.9 4.5 44 21-66 97-142 (527)
320 3d3k_A Enhancer of mRNA-decapp 22.4 2.7E+02 0.0091 21.4 7.3 58 132-190 87-145 (259)
321 4e6p_A Probable sorbitol dehyd 22.4 2.4E+02 0.0081 21.0 6.5 30 132-162 9-38 (259)
322 3lor_A Thiol-disulfide isomera 22.3 40 0.0014 22.9 1.8 40 26-65 32-72 (160)
323 1onf_A GR, grase, glutathione 22.3 3.4E+02 0.012 22.6 8.4 59 131-191 176-237 (500)
324 4a8p_A Putrescine carbamoyltra 22.3 3.2E+02 0.011 22.3 7.5 95 91-189 106-210 (355)
325 4iin_A 3-ketoacyl-acyl carrier 22.3 2.3E+02 0.0078 21.2 6.5 20 119-139 42-61 (271)
326 3ib6_A Uncharacterized protein 22.3 1.9E+02 0.0065 20.3 5.7 62 121-182 41-111 (189)
327 1qmv_A Human thioredoxin perox 22.3 67 0.0023 23.0 3.1 40 26-65 36-76 (197)
328 3ztl_A Thioredoxin peroxidase; 22.2 67 0.0023 23.8 3.2 40 26-65 71-111 (222)
329 1nrw_A Hypothetical protein, h 22.2 97 0.0033 23.6 4.3 39 26-64 6-44 (288)
330 3sz8_A 2-dehydro-3-deoxyphosph 22.2 97 0.0033 24.5 4.2 116 42-166 76-205 (285)
331 3dao_A Putative phosphatse; st 22.2 95 0.0032 23.6 4.2 44 21-64 18-62 (283)
332 4dw8_A Haloacid dehalogenase-l 22.1 94 0.0032 23.3 4.1 40 25-64 6-45 (279)
333 3n6r_B Propionyl-COA carboxyla 22.1 1E+02 0.0036 26.7 4.7 28 39-66 122-149 (531)
334 3qk7_A Transcriptional regulat 22.1 2.5E+02 0.0087 21.0 8.1 118 44-186 27-157 (294)
335 1w6u_A 2,4-dienoyl-COA reducta 22.1 2.4E+02 0.0081 21.4 6.6 23 115-138 35-57 (302)
336 1pix_A Glutaconyl-COA decarbox 22.0 86 0.0029 27.6 4.2 28 39-66 122-149 (587)
337 1tf7_A KAIC; homohexamer, hexa 22.0 96 0.0033 26.4 4.5 45 23-67 371-417 (525)
338 3eyx_A Carbonic anhydrase; ros 22.0 1.9E+02 0.0066 21.7 5.7 47 103-149 65-117 (216)
339 4h8a_A Ureidoglycolate dehydro 22.0 75 0.0025 25.8 3.6 44 23-68 75-118 (339)
340 1x0u_A Hypothetical methylmalo 21.9 1E+02 0.0036 26.6 4.7 28 39-66 108-135 (522)
341 3lf2_A Short chain oxidoreduct 21.9 2.5E+02 0.0087 20.9 6.7 30 132-162 9-38 (265)
342 3fok_A Uncharacterized protein 21.8 3.1E+02 0.011 21.9 10.6 140 40-191 159-304 (307)
343 3lup_A DEGV family protein; PS 21.8 1.2E+02 0.004 23.8 4.7 72 124-198 77-151 (285)
344 3k31_A Enoyl-(acyl-carrier-pro 21.8 1.2E+02 0.004 23.5 4.7 21 119-140 45-65 (296)
345 3icc_A Putative 3-oxoacyl-(acy 21.7 2.4E+02 0.0083 20.6 6.4 30 132-162 8-37 (255)
346 4a8t_A Putrescine carbamoyltra 21.7 3.2E+02 0.011 22.1 7.5 93 93-189 130-232 (339)
347 3kxp_A Alpha-(N-acetylaminomet 21.7 1.8E+02 0.0062 21.7 5.8 53 121-173 123-175 (314)
348 3un1_A Probable oxidoreductase 21.7 2E+02 0.007 21.5 6.0 35 129-164 26-60 (260)
349 2oln_A NIKD protein; flavoprot 21.7 99 0.0034 24.7 4.4 31 133-165 6-36 (397)
350 4g1k_A Triosephosphate isomera 21.6 2.1E+02 0.0072 22.4 6.0 54 111-164 93-153 (272)
351 3s9f_A Tryparedoxin; thioredox 21.6 61 0.0021 22.6 2.7 40 26-65 50-90 (165)
352 2p2s_A Putative oxidoreductase 21.6 2.9E+02 0.0099 21.5 8.1 65 120-188 56-120 (336)
353 1oth_A Protein (ornithine tran 21.5 2.6E+02 0.0089 22.4 6.7 98 93-194 113-217 (321)
354 1ht6_A AMY1, alpha-amylase iso 21.5 1.2E+02 0.004 24.8 4.8 57 124-189 28-86 (405)
355 1ebd_A E3BD, dihydrolipoamide 21.5 3.3E+02 0.011 22.2 8.5 59 131-191 170-231 (455)
356 3civ_A Endo-beta-1,4-mannanase 21.4 1.6E+02 0.0053 23.8 5.4 41 121-161 57-115 (343)
357 3f9i_A 3-oxoacyl-[acyl-carrier 21.4 90 0.0031 23.1 3.8 26 113-139 21-46 (249)
358 1nf2_A Phosphatase; structural 21.3 85 0.0029 23.7 3.7 38 26-64 4-41 (268)
359 3e8x_A Putative NAD-dependent 21.2 1.3E+02 0.0045 21.9 4.7 27 113-140 28-54 (236)
360 1ur4_A Galactanase; hydrolase, 21.1 1.6E+02 0.0053 24.5 5.4 43 120-162 51-108 (399)
361 2ew8_A (S)-1-phenylethanol deh 21.1 1.3E+02 0.0045 22.4 4.7 29 133-162 9-37 (249)
362 2z1n_A Dehydrogenase; reductas 21.0 2.6E+02 0.0089 20.7 6.7 30 132-162 8-37 (260)
363 3nrn_A Uncharacterized protein 21.0 1.2E+02 0.0042 24.4 4.9 30 133-164 2-31 (421)
364 3fkj_A Putative phosphosugar i 21.0 63 0.0021 26.1 3.0 42 122-163 30-75 (347)
365 3qy1_A Carbonic anhydrase; str 20.9 2E+02 0.0067 21.7 5.6 47 103-149 59-111 (223)
366 3grf_A Ornithine carbamoyltran 20.8 3.3E+02 0.011 21.8 7.6 66 132-197 162-231 (328)
367 1uul_A Tryparedoxin peroxidase 20.8 81 0.0028 22.7 3.4 40 26-65 38-78 (202)
368 3pzy_A MOG; ssgcid, seattle st 20.8 1.1E+02 0.0039 21.7 4.0 59 120-180 30-90 (164)
369 1on3_A Methylmalonyl-COA carbo 20.8 1.1E+02 0.0037 26.5 4.5 28 39-66 112-139 (523)
370 2bzr_A Propionyl-COA carboxyla 20.8 1.3E+02 0.0043 26.3 4.9 28 39-66 125-152 (548)
371 2f9i_A Acetyl-coenzyme A carbo 20.8 1.7E+02 0.0059 23.5 5.5 29 39-67 142-170 (327)
372 3or5_A Thiol:disulfide interch 20.7 66 0.0023 21.8 2.8 40 26-65 36-75 (165)
373 2ywi_A Hypothetical conserved 20.7 94 0.0032 21.9 3.7 41 26-66 48-88 (196)
374 2i9e_A Triosephosphate isomera 20.7 2.2E+02 0.0074 22.1 5.9 54 111-164 67-127 (259)
375 2vt1_B Surface presentation of 20.7 72 0.0025 20.7 2.6 22 43-64 26-47 (93)
376 2g8y_A Malate/L-lactate dehydr 20.7 74 0.0025 26.4 3.3 45 22-68 98-142 (385)
377 2l5o_A Putative thioredoxin; s 20.7 1.1E+02 0.0039 20.3 4.0 40 26-65 30-69 (153)
378 2a8x_A Dihydrolipoyl dehydroge 20.7 3.5E+02 0.012 22.1 8.3 59 131-191 171-232 (464)
379 2g1u_A Hypothetical protein TM 20.6 1.6E+02 0.0054 20.1 4.8 21 119-140 31-51 (155)
380 3eno_A Putative O-sialoglycopr 20.6 2.5E+02 0.0086 22.4 6.5 55 128-182 247-304 (334)
381 1d7o_A Enoyl-[acyl-carrier pro 20.6 1.3E+02 0.0044 23.0 4.7 31 132-162 9-40 (297)
382 1fob_A Beta-1,4-galactanase; B 20.6 1.3E+02 0.0044 24.0 4.8 43 120-162 30-79 (334)
383 1c0p_A D-amino acid oxidase; a 20.6 1.2E+02 0.0041 23.9 4.6 30 133-164 8-37 (363)
384 3a28_C L-2.3-butanediol dehydr 20.6 1.8E+02 0.0061 21.7 5.4 15 147-161 17-31 (258)
385 1p5j_A L-serine dehydratase; l 20.6 3.4E+02 0.012 21.9 7.7 56 127-190 89-144 (372)
386 3jzd_A Iron-containing alcohol 20.6 3.4E+02 0.011 21.9 7.6 63 120-184 25-88 (358)
387 4fo5_A Thioredoxin-like protei 20.6 30 0.001 23.3 0.8 40 26-65 34-73 (143)
388 1tk9_A Phosphoheptose isomeras 20.6 1E+02 0.0035 21.8 3.8 25 43-67 123-147 (188)
389 3ip3_A Oxidoreductase, putativ 20.6 1.4E+02 0.005 23.4 5.1 62 120-185 57-118 (337)
390 3k4h_A Putative transcriptiona 20.4 2.5E+02 0.0085 20.9 6.3 67 120-186 82-162 (292)
391 1ve1_A O-acetylserine sulfhydr 20.4 3E+02 0.01 21.2 6.9 50 134-190 64-113 (304)
392 2wsb_A Galactitol dehydrogenas 20.4 1.4E+02 0.0047 22.0 4.7 29 133-162 13-41 (254)
393 3fhl_A Putative oxidoreductase 20.4 3.2E+02 0.011 21.6 7.8 62 120-185 55-116 (362)
394 1xhl_A Short-chain dehydrogena 20.3 2.5E+02 0.0084 21.6 6.3 13 119-131 39-51 (297)
395 3oos_A Alpha/beta hydrolase fa 20.3 2.4E+02 0.008 20.1 6.0 48 121-168 80-127 (278)
396 3mpo_A Predicted hydrolase of 20.3 94 0.0032 23.3 3.8 40 25-64 6-45 (279)
397 2b4q_A Rhamnolipids biosynthes 20.2 2.9E+02 0.0098 20.9 7.2 15 147-161 44-58 (276)
398 1pzx_A Hypothetical protein AP 20.1 1.9E+02 0.0063 22.6 5.5 68 126-197 77-151 (289)
399 1rrm_A Lactaldehyde reductase; 20.1 2.2E+02 0.0074 23.1 6.1 65 120-184 20-87 (386)
400 3gdg_A Probable NADP-dependent 20.1 1E+02 0.0035 23.1 3.9 31 132-162 21-52 (267)
401 1y7l_A O-acetylserine sulfhydr 20.0 3.1E+02 0.011 21.3 7.1 57 126-190 53-113 (316)
402 2i1q_A DNA repair and recombin 20.0 89 0.0031 24.5 3.7 48 22-69 203-261 (322)
No 1
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=100.00 E-value=1e-46 Score=295.05 Aligned_cols=175 Identities=24% Similarity=0.362 Sum_probs=162.4
Q ss_pred CCCCCeEEEEEeccCccCCC--------chhHHHHHHHHHHHHH---HCCCcEEEEecccCCCCCccccccccCCCcccc
Q 028963 19 PNPKSSVLLVIDMQNHFSSI--------AKPILDNTLATVQLCR---RASIPVFFTRHCHKSPADYGMLGEWWNGDLVYD 87 (201)
Q Consensus 19 ~~~~~~aLlviD~Q~~f~~~--------~~~~i~~i~~l~~~ar---~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (201)
++.+++|||||||||+|+++ .+.+++++++|+++|| +.|+||||+++.|.+.. .....||.| |.+
T Consensus 3 ~~m~~tALlvID~Q~~f~~~~g~l~~~~~~~ii~~i~~Ll~~ar~~~~~g~pVi~t~~~~~~~~---~~~~~~~~~-~~~ 78 (204)
T 3hb7_A 3 QGMAKHAILVIDMLNDFVGEKAPLRCPGGETIIPDLQKIFEWVRGREGDDIHLVHIQEAHRKND---ADFRVRPLH-AVK 78 (204)
T ss_dssp SSSCCEEEEEECCBTTTSSTTCTTCCGGGGGGHHHHHHHHHHHHHSSSSSEEEEEEEECBCCCS---CCSSSSCSS-CBT
T ss_pred CCCCCeEEEEEcCchhhcCCCCcccCccHHHHHHHHHHHHHHHHhhhhcCCEEEEEEccCCCCC---hhhhhcchh-ccC
Confidence 56789999999999999972 4578999999999999 99999999999987432 234568877 999
Q ss_pred CCCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCC
Q 028963 88 GTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATA 167 (201)
Q Consensus 88 g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~ 167 (201)
|++|++++|+|.| .+++.+|.|++||+|++|+|.++|+++|+++|+|+|+.|++||++||++|+++||+|+|++|||+
T Consensus 79 gt~g~~i~~~l~~--~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~a 156 (204)
T 3hb7_A 79 GTWGSDFIPELYP--QEDEYIVQKRRHSGFAHTDLDLYLKEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSDGTA 156 (204)
T ss_dssp TSTTTSBCGGGCC--CTTCEEEEESSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCchhhcCHhhCC--CCCCEEEeCCccCCccCccHHHHHHHCCCCEEEEEeecccHHHHHHHHHHHHCCCEEEEechhcc
Confidence 9999999999999 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 168 TSDLELHEATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 168 ~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
+.+++.|+.+|..|. .|+.|+++++++.+|.+
T Consensus 157 s~~~~~h~~al~~l~-~~a~v~tt~~vl~~l~~ 188 (204)
T 3hb7_A 157 SKTEEMHEYGLNDLS-IFTKVMTVDQYIQAWEN 188 (204)
T ss_dssp CSSHHHHHHHHHHHH-HHSEEECHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHH-hCCEEeeHHHHHHHHhc
Confidence 999999999999999 99999999999999965
No 2
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=100.00 E-value=4.4e-47 Score=300.42 Aligned_cols=177 Identities=21% Similarity=0.330 Sum_probs=160.1
Q ss_pred CCCCCCeEEEEEeccCccCCC-------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCC-CccccccccCCCccccCC
Q 028963 18 NPNPKSSVLLVIDMQNHFSSI-------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPA-DYGMLGEWWNGDLVYDGT 89 (201)
Q Consensus 18 ~~~~~~~aLlviD~Q~~f~~~-------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 89 (201)
.++|+++|||||||||+|+++ .+.++++|++|+++||+.|+||||+++.+.+.. +...+..+|+.+ ++
T Consensus 23 ~ldp~rtALlVIDmQ~~F~~~~~~~~~~~~~vv~~i~~Li~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~~----~~ 98 (223)
T 3tg2_A 23 RIDASRAVLLIHNMQEYFVHYFDSQAEPIPSLIKHIQQLKAHAKQAGIPVVYTAQPANQDPAERALLSDFWGPG----LS 98 (223)
T ss_dssp CCCTTTEEEEEECCBHHHHTTBCTTSTTHHHHHHHHHHHHHHHHHHTCCEEEEECCSSCCHHHHTTHHHHHCSC----CS
T ss_pred cCCCCCeEEEEEcCchhhhCccccccccHHHHHHHHHHHHHHHHHcCCeEEEEEEeCCCCchhhcccccccCCC----CC
Confidence 478999999999999999864 256899999999999999999999999887532 223334456554 57
Q ss_pred CCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCC
Q 028963 90 ADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATS 169 (201)
Q Consensus 90 ~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~ 169 (201)
++++++++|.| .++|.+|.|++||+|++|+|.++|+++|+++|+|+|+.|++||++||++|+++||+|+|++|||+++
T Consensus 99 ~~~~i~~eL~p--~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lii~G~~t~~CV~~Ta~da~~~Gy~v~vv~Da~as~ 176 (223)
T 3tg2_A 99 EETAIIAPLAP--ESGDVQLTKWRYSAFKKSPLLDWLRETGRDQLIITGVYAHIGILSTALDAFMFDIQPFVIGDGVADF 176 (223)
T ss_dssp SCCSBCGGGCC--CTTSEEEECCSSSTTTTSSHHHHHHHHTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred cccccChhhCC--CCCCEEEECCcccccccccHHHHHHhcCcCceEEeecccChHHHHHHHHHHHCCCEEEEeCcccCCC
Confidence 88899999999 8999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 170 DLELHEATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 170 ~~~~h~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
+++.|+.+|+.|...++.|+|+++++.+|.+
T Consensus 177 ~~~~h~~aL~~~~~~~a~v~tte~~l~eL~~ 207 (223)
T 3tg2_A 177 SLSDHEFSLRYISGRTGAVKSTQQACLEIAA 207 (223)
T ss_dssp SHHHHHHHHHHHHHHTCEEECHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHcCCEEecHHHHHHHHHh
Confidence 9999999999999999999999999999865
No 3
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=100.00 E-value=2.4e-46 Score=298.40 Aligned_cols=193 Identities=24% Similarity=0.314 Sum_probs=169.9
Q ss_pred cchhhhhhhhccCCCCCCeEEEEEeccCccCCC-------chhHHHHHHHHHHHHHHCCCcEEEEecccCCC-CCccccc
Q 028963 6 CSSYEKYEIRKRNPNPKSSVLLVIDMQNHFSSI-------AKPILDNTLATVQLCRRASIPVFFTRHCHKSP-ADYGMLG 77 (201)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~aLlviD~Q~~f~~~-------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~-~~~~~~~ 77 (201)
...|...|+..+...++++|||||||||+|+++ .+.+++++++|+++||+.|+||||+++.+++. .+.+.+.
T Consensus 27 ~~~~~~~g~~~~~~~~~~tALlVID~Qn~f~~~~~~~~~~~~~vv~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~~~~~~ 106 (236)
T 3ot4_A 27 LGSYERQGFGAALPLKAPYGLLIVDFVNGFADPAQFGGGNIAAAIETTRTVLAAARERGWAVAHSRIVYADDDADGNIFS 106 (236)
T ss_dssp CTHHHHTTCCCCCCCCSSEEEEEECCBHHHHSTTTSCCSSHHHHHHHHHHHHHHHHHHTCEEEEEEECBCTTCTTCCHHH
T ss_pred HHHHHhcCCCCCCCCCCCeEEEEEeCchhhcCCCCccccCHHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCccccchhh
Confidence 445788889999999999999999999999863 25789999999999999999999999887643 2222232
Q ss_pred cccCC-CccccCCCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCC
Q 028963 78 EWWNG-DLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRG 156 (201)
Q Consensus 78 ~~~~~-~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G 156 (201)
..||. ..|.+|++|++++|+|.| .+++.+|.|++||+|++|+|.++|+++|+++|+|+|++|++||++||++|+++|
T Consensus 107 ~~~~~~~~~~~gt~g~ei~~eL~p--~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~G 184 (236)
T 3ot4_A 107 IKVPGMLTLKEHAPASAIVPQLAP--QAGEYVVRKSTPSAFYGTMLAAWLAQRGVQTLLVAGATTSGCVRASVVDAMSAG 184 (236)
T ss_dssp HHSGGGTTCBTTCGGGSBCGGGCC--CTTCEEEEESSSSTTTTSSHHHHHHHTTCCEEEEEESCTTTHHHHHHHHHHHHT
T ss_pred hcCCccccccCCCCccccCHhhcc--cCCceEEECCccCcccCchHHHHHHHCCCCEEEEeCccCcHHHHHHHHHHHHCC
Confidence 23342 349999999999999999 789999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 157 FRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 157 ~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
|+|+|++|||++.+++.|+.+|..|...|+.|++++++++.|++
T Consensus 185 y~V~vv~Da~as~~~~~h~~aL~~m~~~~a~v~tt~evl~~L~~ 228 (236)
T 3ot4_A 185 FRPLVLSDCVGDRALGPHEANLFDMRQKYAAVMTHDEALAKTKG 228 (236)
T ss_dssp CEEEEEEEEECCSCHHHHHHHHHHHHHHTSEEECHHHHHC----
T ss_pred CEEEEechhcCCCCHHHHHHHHHHHHhcCCEEeeHHHHHHHHHh
Confidence 99999999999999999999999999999999999999998864
No 4
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=100.00 E-value=1e-45 Score=289.40 Aligned_cols=181 Identities=23% Similarity=0.266 Sum_probs=158.4
Q ss_pred CCCCCCeEEEEEeccCccCCC--------chhHHHHHHHHHHHHHHCCCcEEEEecccCCC-CCcc-ccccccCC--Ccc
Q 028963 18 NPNPKSSVLLVIDMQNHFSSI--------AKPILDNTLATVQLCRRASIPVFFTRHCHKSP-ADYG-MLGEWWNG--DLV 85 (201)
Q Consensus 18 ~~~~~~~aLlviD~Q~~f~~~--------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~-~~~~-~~~~~~~~--~~~ 85 (201)
.++++++|||||||||+|+.+ .+.+++++++|+++||..|+||||+.+.+.+. .+.. .....|+. ..|
T Consensus 3 ~~~~~~tALlvID~Q~~f~~~~g~l~~~~~~~iv~~i~~L~~~ar~~g~pVi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (204)
T 3hu5_A 3 LTRNRTVALAIIDMQNDFVLPGAPACVEGAMGTVPVIAGLLAKARAEGWMVLHVVRAHRADGSDAEKSREHLFLEGGGLC 82 (204)
T ss_dssp ---CCCEEEEEECCBHHHHSTTSTTCCTTHHHHHHHHHHHHHHHHHHTCEEEEEECCBCTTSTTSCGGGGGGGSSSCCSS
T ss_pred CCCCCCeEEEEECCchhhhCCCCcccccCHHHHHHHHHHHHHHHHHCCCeEEEEEcccCCCcccccccccccCCcccccc
Confidence 367889999999999999842 36789999999999999999999975544432 1211 11234543 349
Q ss_pred ccCCCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC
Q 028963 86 YDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 86 ~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
.+|++|++++|+|.| .+++.+|.|++||+|++|+|.++|+++||++|+|+|++|++||++||++|+++||+|+|++||
T Consensus 83 ~~gt~g~ei~~~l~~--~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da 160 (204)
T 3hu5_A 83 VAGTPGAEIVAGLEP--ASGETVLVKTRFSAFMGTECDMLLRRRGVDTLLVSGTQYPNCIRGTAVDAFALDYDVVVVTDA 160 (204)
T ss_dssp BTTSGGGSBCTTCCC--CTTCEEEECSSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCCCcccccccccCC--CCCCEEEECCccCCCCCcCHHHHHHhCCCCeEEEeeeccchHHHHHHHHHHHCCCEEEEehhh
Confidence 999999999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 166 TATSDLELHEATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 166 ~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
|++.+++.|+.+|+.|+..|+.|++++|+++.|++
T Consensus 161 ~as~~~~~h~~al~~m~~~g~~v~tt~e~l~~l~~ 195 (204)
T 3hu5_A 161 CSARTPGVAESNINDMRAMGITCVPLTALDDVLAR 195 (204)
T ss_dssp EECSSHHHHHHHHHHHHHHTCEEECGGGHHHHHHC
T ss_pred hCCCCHHHHHHHHHHHHHhCCEEEEHHHHHHHHHh
Confidence 99999999999999999999999999999999975
No 5
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=100.00 E-value=5.2e-46 Score=296.39 Aligned_cols=182 Identities=27% Similarity=0.466 Sum_probs=165.4
Q ss_pred cCCCCCCeEEEEEeccCccCCC--------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCC-CccccccccCCC--cc
Q 028963 17 RNPNPKSSVLLVIDMQNHFSSI--------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPA-DYGMLGEWWNGD--LV 85 (201)
Q Consensus 17 ~~~~~~~~aLlviD~Q~~f~~~--------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~-~~~~~~~~~~~~--~~ 85 (201)
..++++++|||||||||+|+++ .+.+++++++|+++||..|+||||+++.+.+.. +.+.+..+||.. .|
T Consensus 16 ~~l~~~~tALlvID~Q~~f~~~~g~l~~~~~~~vv~~i~~Ll~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~p~~~~~~ 95 (233)
T 3irv_A 16 WPINPLRTAVIVVDMQKVFCEPTGALYVKSTADIVQPIQKLLQAARAAQVMVIYLRHIVRGDGSDTGRMRDLYPNVDQIL 95 (233)
T ss_dssp CCCCGGGEEEEEECCBHHHHSTTSTTCCGGGGGGHHHHHHHHHHHHHTTCEEEEEEECBCSSSTTCSHHHHHSTTHHHHS
T ss_pred CCCCCCCeEEEEECCchhhhCCCCcccCCCHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCccchhhhhhhcCcccccc
Confidence 4578899999999999999852 467899999999999999999999999987532 333445667762 49
Q ss_pred ccCCCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC
Q 028963 86 YDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 86 ~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
.+|++|++++++|.| .+++.+|.|++||+|++|+|.++|+++||++|+|+|+.|++||++||++|+++||+|+|++||
T Consensus 96 ~~gt~g~ei~~~l~p--~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da 173 (233)
T 3irv_A 96 ARHDPDVEVIEALAP--QSDDVIVDKLFYSGFHNTDLDTVLRARDVDTIIVCGTVTNVCCETTIRDGVHREYKVIALSDA 173 (233)
T ss_dssp BTTCGGGSBCGGGCC--CTTSEEEEESSSCSSTTSTHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCCCCccccchhhCC--CCCCEEEECCccCCCcCCcHHHHHHhCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEechh
Confidence 999999999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-----------CHHHHHHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 166 TATS-----------DLELHEATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 166 ~~~~-----------~~~~h~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
|+++ +++.|+.+|..|...|+.|+++++++.+|.+
T Consensus 174 ~as~d~~~~~~~~~~~~~~h~~aL~~l~~~~a~V~tt~evl~~l~~ 219 (233)
T 3irv_A 174 NAAMDYPDVGFGAVSAADVQRISLTTIAYEFGEVTTTAEVIRRIES 219 (233)
T ss_dssp EECCCBCCSSSCCBCHHHHHHHHHHHHHHHTSEEECHHHHHHHHHH
T ss_pred hccCcccccccccCChHHHHHHHHHHHHhcCcEEeEHHHHHHHHHh
Confidence 9997 6899999999999999999999999999853
No 6
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=100.00 E-value=1.1e-45 Score=299.19 Aligned_cols=190 Identities=22% Similarity=0.291 Sum_probs=172.4
Q ss_pred hhhhhhhhccCCCCCCeEEEEEeccCccCCC--------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCC------Cc
Q 028963 8 SYEKYEIRKRNPNPKSSVLLVIDMQNHFSSI--------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPA------DY 73 (201)
Q Consensus 8 ~~~~~~~~~~~~~~~~~aLlviD~Q~~f~~~--------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~------~~ 73 (201)
.|+++|+.++...++++|||||||||+|+++ .+.+++++++|+++||+.|+||||+++.+.++. +.
T Consensus 29 ~~~~~g~~~~~~~~~~tALLVIDmQndf~~~~g~l~~~~~~~vi~~i~~Ll~~aR~~g~pVI~t~~~~~~~~~~s~l~~~ 108 (264)
T 1nba_A 29 IYNERGFKRRIGYGNRPAVIHIDLANAWTQPGHPFSCPGMETIIPNVQRINEAARAKGVPVFYTTNVYRNRDASSGTNDM 108 (264)
T ss_dssp HHHHHTCSCCCCCCSSEEEEEESCBHHHHSSSSTTCCSCHHHHHHHHHHHHHHHHHHTCCEEEEEECBSCCCTTSTTCSC
T ss_pred HHHhcCccCCCCCCCCeEEEEEcCcHhHhCCCcccCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeccCCCccccccccc
Confidence 3888899998888899999999999999853 346899999999999999999999999985432 12
Q ss_pred cccccccCCCccccCCCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHH
Q 028963 74 GMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAF 153 (201)
Q Consensus 74 ~~~~~~~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~ 153 (201)
+.+...||.+.|..|++|++++++|.+ .+++.+|.|++||+|++|+|.++|+++||++|||+|+.|++||++||++|+
T Consensus 109 ~~~~~~~p~~~~~~gt~g~ei~~~L~p--~~~d~vi~K~~~SaF~~T~L~~~Lr~~gi~~lvI~Gv~T~~CV~~Ta~dA~ 186 (264)
T 1nba_A 109 GLWYSKIPTETLPADSYWAQIDDRIAP--ADGEVVIEKNRASAFPGTNLELFLTSNRIDTLIVTGATAAGCVRHTVEDAI 186 (264)
T ss_dssp GGGGGTSCGGGCBTTSGGGSBCGGGCC--CTTCEEEEESSSSSSTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHH
T ss_pred cccccccccccccCCCCccccccccCC--CCCCEEEeCCcCCCcccchHHHHHHhCCCCEEEEEecCcCCHHHHHHHHHH
Confidence 334445666668889999999999999 789999999999999999999999999999999999999999999999999
Q ss_pred hCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhhc
Q 028963 154 VRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAGLF 199 (201)
Q Consensus 154 ~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l~ 199 (201)
++||+|+|++|||++.+++.|+.+|..|...++.|++++|+++.|.
T Consensus 187 ~~Gy~V~Vv~DA~as~~~~~h~~aL~~m~~~~~~vitt~e~l~~L~ 232 (264)
T 1nba_A 187 AKGFRPIIPRETIGDRVPGVVQWNLYDIDNKFGDVESTDSVVQYLD 232 (264)
T ss_dssp HHTCEEEEEGGGEECSSSSHHHHHHHHHHHHTCEEECHHHHHHHHH
T ss_pred HCCCEEEEeccccCCCCHHHHHHHHHHHHhcCcEEeEHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999885
No 7
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=100.00 E-value=3.3e-45 Score=283.56 Aligned_cols=169 Identities=25% Similarity=0.421 Sum_probs=153.6
Q ss_pred CCCCCCeEEEEEeccCccCC---C-------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCcccc
Q 028963 18 NPNPKSSVLLVIDMQNHFSS---I-------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYD 87 (201)
Q Consensus 18 ~~~~~~~aLlviD~Q~~f~~---~-------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (201)
+++++++|||||||||+|++ . .+.+++++++|+++||..|+||||+++.++++. +.+ |.+
T Consensus 2 m~~~~~~aLlvID~Q~~f~~~~~~g~l~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~---------~~~-~~~ 71 (190)
T 3lqy_A 2 MTTENTTALLLIDFQNDYFSTYNGAKNPLVGTEAAAEQGAKLLAKFRQQGLPVVHVRHEFPTDE---------APF-FLP 71 (190)
T ss_dssp CCCSCCEEEEEECCBGGGCTTSTTCSSCCBTHHHHHHHHHHHHHHHHHTTCCEEEEEECC-CTT---------CSS-SCT
T ss_pred CCCCCCEEEEEEcCchhhhCcCCCCccCcCCHHHHHHHHHHHHHHHHHCCCeEEEEEEecCCCC---------CCc-ccC
Confidence 36788999999999999996 1 357899999999999999999999999776421 223 899
Q ss_pred CCCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCC
Q 028963 88 GTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATA 167 (201)
Q Consensus 88 g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~ 167 (201)
|++|++++|+|.+ .+++.+|.|++||+|++|+|.++|+++|+++|+|+|+.|++||++||++|+++||+|+|++|||+
T Consensus 72 gt~g~~i~~~l~~--~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~v~vv~Da~~ 149 (190)
T 3lqy_A 72 GSDGAKIHPSVAA--QEGEAVVLKHQINSFRDTDLKKVLDDAGIKKLVIVGAMTHMAIDAVTRAAEDLGYECAVAHDACA 149 (190)
T ss_dssp TCGGGSBCGGGCC--CTTSCEEEESSSSTTTTSSHHHHHHHC-CCEEEEEEECTTTHHHHHHHHHHHHTCEEEEEEEEEE
T ss_pred CCCccccCcccCC--CCCCEEEECCCCCccccchHHHHHHhCCCCEEEEEecCcChHHHHHHHHHHHCCCEEEEechhhc
Confidence 9999999999999 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCH----------HHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 168 TSDL----------ELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 168 ~~~~----------~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
+.++ +.|+.+|..|...|+.|++++++++.|
T Consensus 150 s~~~~~~~~~~~a~~~h~~~L~~l~~~~a~V~tt~~~l~~l 190 (190)
T 3lqy_A 150 TLDLEFNGITVPAAQVHAAFMSALSFAYANVASADELIAGL 190 (190)
T ss_dssp BCCEEETTEEECHHHHHHHHHHHHBTTTBEEECHHHHHTC-
T ss_pred cCCccccCccCCHHHHHHHHHHHHhhCcEEEEEHHHHHhhC
Confidence 9984 799999999999999999999999865
No 8
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=100.00 E-value=3.3e-45 Score=285.20 Aligned_cols=170 Identities=28% Similarity=0.322 Sum_probs=157.5
Q ss_pred CCCCCCeEEEEEeccCccCCC------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCC
Q 028963 18 NPNPKSSVLLVIDMQNHFSSI------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTAD 91 (201)
Q Consensus 18 ~~~~~~~aLlviD~Q~~f~~~------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g 91 (201)
.++++++|||||||||+|+++ .+.+++++++|+++||..|+||||+++.+..+.. .+.+|++|
T Consensus 7 ~~~~~~~ALlvID~Q~~f~~~~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~~~~~~~~~~~-----------~~~~g~~g 75 (198)
T 3mcw_A 7 RFSSDKPLLLLIDMQQAVDDPSWGPRNHPQAEQACAGLLQAWRARGLPLIHIRHDSVEPNS-----------TYRPGQPG 75 (198)
T ss_dssp CCSSSCCEEEEECCBGGGGSGGGCCBSCTTHHHHHHHHHHHHHHHTCCEEEEEECCCCTTC-----------TTCTTSGG
T ss_pred ccCCCCCEEEEEeCchhhcCCCccccChHHHHHHHHHHHHHHHHCCCEEEEEEEecCCCCC-----------CCCCcCCc
Confidence 478899999999999999864 3579999999999999999999999998764421 14569999
Q ss_pred ccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCH
Q 028963 92 AELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDL 171 (201)
Q Consensus 92 ~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~ 171 (201)
++++|+|.| .+++.+|.|++||+|++|+|.++|+++|+++|+|+|+.|++||++||++|+++||+|+|++|||++++.
T Consensus 76 ~~i~~~l~~--~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~v~vv~Da~~s~~~ 153 (198)
T 3mcw_A 76 HAFKPEVEP--RPGETVIAKQTNSAFIGTGLEALLRANGWLELVVAGVSTSNSVEATVRMAGNLGFAVCLAEDGCFTFDK 153 (198)
T ss_dssp GSBCGGGCC--CTTCEEEEESSSSTTTTSSHHHHHHHHTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECBCE
T ss_pred cccCcccCC--CCCCEEEEcCccCccccchHHHHHHcCCCCeEEEEEcCcChHHHHHHHHHHHCCCEEEEeCcccccccc
Confidence 999999999 789999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred -----------HHHHHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 172 -----------ELHEATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 172 -----------~~h~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
+.|+.+|..|...|+.|+++++++.+|.+
T Consensus 154 ~~~~g~~~~~~~~h~~al~~l~~~~a~v~tt~~~l~~l~~ 193 (198)
T 3mcw_A 154 TDWHGRRRSADEVHAMSLANLDGEYCRVCGSADILAALGN 193 (198)
T ss_dssp ECTTSCEECHHHHHHHHHHHHBTTTBEEECHHHHHHHHTT
T ss_pred cccccccCCHHHHHHHHHHHHHhccEEEeeHHHHHHHHHH
Confidence 99999999999999999999999999975
No 9
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=8.4e-46 Score=285.08 Aligned_cols=170 Identities=25% Similarity=0.370 Sum_probs=152.5
Q ss_pred CCeEEEEEeccCccCCC------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCcccc
Q 028963 22 KSSVLLVIDMQNHFSSI------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELL 95 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 95 (201)
+++|||||||||+|.++ .+.+++++++|+++||..|+||||+++.|.+.. .....||.| |..|++|++++
T Consensus 1 mk~ALlvID~Q~~f~~g~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~---~~~~~~~~~-~~~g~~g~~~~ 76 (182)
T 3eef_A 1 MKPALVVVDMVNEFIHGRLATPEAMKTVGPARKVIETFRRSGLPVVYVNDSHYPDD---PEIRIWGRH-SMKGDDGSEVI 76 (182)
T ss_dssp CCEEEEEECCBHHHHTSTTCCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECBCTTS---TTHHHHCSC-SBTTSGGGSBC
T ss_pred CCEEEEEEcCCCcCCCCccCCccHHHHHHHHHHHHHHHHHcCCeEEEEecccCCCC---hhhhhcchh-hcCCCchhhhh
Confidence 57899999999999863 357899999999999999999999998876432 123468887 99999999999
Q ss_pred ccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHH
Q 028963 96 PEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHE 175 (201)
Q Consensus 96 ~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~ 175 (201)
|+|.| .+++.+|.|++||+|++|+|.++|+++|+++|+|+|+.|++||++||++|+++||+|+|++|||++ ++.|+
T Consensus 77 ~~l~~--~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as--~~~~~ 152 (182)
T 3eef_A 77 DEIRP--SAGDYVLEKHAYSGFYGTNLDMILRANGIDTVVLIGLDADICVRHTAADALYRNYRIIVVEDAVAA--RIDPN 152 (182)
T ss_dssp GGGCC--CTTCEEEEESSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEC--SSCTT
T ss_pred hhhCC--CCCcEEEeecccCCCCCCCHHHHHHhcCCCeEEEEEeccCHHHHHHHHHHHHCCCEEEEehhhcCC--HHHHH
Confidence 99999 889999999999999999999999999999999999999999999999999999999999999999 78899
Q ss_pred HHHHHHhh-cceEEeeHHHHHHhhcC
Q 028963 176 ATLKNLAY-GFAYLFDCERLEAGLFG 200 (201)
Q Consensus 176 ~al~~l~~-~~~~v~~~~e~~~~l~~ 200 (201)
.+ +.|+. .|+.|+++++++.+|.+
T Consensus 153 ~a-~~m~~~~ga~v~~~~~vl~~l~~ 177 (182)
T 3eef_A 153 WK-DYFTRVYGATVKRSDEIEGMLQE 177 (182)
T ss_dssp HH-HHHHHHHCCEEECTTCCCC----
T ss_pred HH-HHHHHhcCcEEeEHHHHHHHhhc
Confidence 99 99998 69999999999999864
No 10
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=100.00 E-value=2.1e-45 Score=288.26 Aligned_cols=176 Identities=23% Similarity=0.384 Sum_probs=159.0
Q ss_pred CCCCCCeEEEEEeccCccCCC-----chhHHHHHHHHHHHHHHCCCcEEEEecccCCC-CCccccccccCCCccccCCCC
Q 028963 18 NPNPKSSVLLVIDMQNHFSSI-----AKPILDNTLATVQLCRRASIPVFFTRHCHKSP-ADYGMLGEWWNGDLVYDGTAD 91 (201)
Q Consensus 18 ~~~~~~~aLlviD~Q~~f~~~-----~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~g 91 (201)
.++++++|||||||||+|++. .+.+++++++|+++||+.|+||||+++.+.++ .+.+.....|+.+ |..|++|
T Consensus 26 ~l~~~~tALlvID~Q~~f~~~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~~-~~~g~~g 104 (207)
T 1nf9_A 26 SLEPRRAVLLVHDMQRYFLRPLPESLRAGLVANAARLRRWCVEQGVQIAYTAQPGSMTEEQRGLLKDFWGPG-MRASPAD 104 (207)
T ss_dssp CCCGGGEEEEEESCBHHHHTTSCHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCCHHHHTTHHHHHTTC-CCSSHHH
T ss_pred ccCCCCeEEEEECChHHhcCCCCcccHHHHHHHHHHHHHHHHHcCCeEEEEeecCCCChhhhhhhhhhcCCC-CCCCCch
Confidence 467789999999999999964 35689999999999999999999999876532 1112234567777 8899999
Q ss_pred ccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCH
Q 028963 92 AELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDL 171 (201)
Q Consensus 92 ~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~ 171 (201)
++++++|.+ .+++.+|.|++||+|++|+|.++|+++|+++|+|+|++|++||++||++|+++||+|+|++|||++.++
T Consensus 105 ~~i~~~l~p--~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~ 182 (207)
T 1nf9_A 105 REVVEELAP--GPDDWLLTKWRYSAFFHSDLLQRMRAAGRDQLVLCGVYAHVGVLISTVDAYSNDIQPFLVADAIADFSE 182 (207)
T ss_dssp HSBCGGGCC--CTTSEEEECCSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSH
T ss_pred hhhchhhCC--CCCCEEEecCCCCCcCCCcHHHHHHHcCCCEEEEEeeecChHHHHHHHHHHHCCCEEEEeCcccCCCCH
Confidence 999999999 789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcceEEeeHHHHHH
Q 028963 172 ELHEATLKNLAYGFAYLFDCERLEA 196 (201)
Q Consensus 172 ~~h~~al~~l~~~~~~v~~~~e~~~ 196 (201)
+.|+.+|+.|...|+.|++++++++
T Consensus 183 ~~h~~al~~~~~~~~~v~~t~~~l~ 207 (207)
T 1nf9_A 183 AHHRMALEYAASRCAMVVTTDEVLE 207 (207)
T ss_dssp HHHHHHHHHHHHHTCEEECHHHHHC
T ss_pred HHHHHHHHHHHHhCcEEccHHHHhC
Confidence 9999999999999999999999873
No 11
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=100.00 E-value=3.6e-44 Score=279.57 Aligned_cols=177 Identities=24% Similarity=0.341 Sum_probs=154.5
Q ss_pred CCCCCCeEEEEEeccCccCCC------chhHHHHHHHHHHHHHHCCCcEEEEecccCCC-CCc--cccccccCCCccccC
Q 028963 18 NPNPKSSVLLVIDMQNHFSSI------AKPILDNTLATVQLCRRASIPVFFTRHCHKSP-ADY--GMLGEWWNGDLVYDG 88 (201)
Q Consensus 18 ~~~~~~~aLlviD~Q~~f~~~------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~-~~~--~~~~~~~~~~~~~~g 88 (201)
.++++++|||||||||+|++. .+.+++++++|+++||+.|+||||+++.+.++ .+. ......||.| |..+
T Consensus 14 ~l~~~~~ALlvID~Q~~f~~~~~~~~~~~~~i~~i~~ll~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 92 (199)
T 1j2r_A 14 ELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKFRASGQPVFLVRVGWSADYAEALKQPVDAPSPAK-VLPE 92 (199)
T ss_dssp CCCGGGEEEEEECCSTTTGGGCCBSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCTTCTTSCCCCCSSCCCCC-CCCT
T ss_pred ecCCCCeEEEEEecchhhhCCCcccccHHHHHHHHHHHHHHHHHcCCcEEEEEeeeCCCccccccCcccccCCCc-CcCC
Confidence 468889999999999999853 35699999999999999999999999433322 111 1123446766 5444
Q ss_pred CCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCC
Q 028963 89 TADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATAT 168 (201)
Q Consensus 89 ~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~ 168 (201)
++ ++++|+|.+ .+++.+|.|++||+|++|+|.++|+++|+++|+|+|++|++||++||++|+++||+|+|++|||++
T Consensus 93 ~~-~~~~~~l~~--~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~v~vv~Da~as 169 (199)
T 1j2r_A 93 NW-WQHPAALGT--TDSDIEIIKRQWGAFYGTDLELQLRRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSA 169 (199)
T ss_dssp TT-TCCCGGGCC--CTTSEEEEESSSSSSTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEB
T ss_pred Ch-hHhChhhCC--CCCCEEEeCCCcCCcCCCCHHHHHHHCCCCEEEEEeeeccHHHHHHHHHHHHCCCEEEEehhhcCC
Confidence 43 499999999 788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 169 SDLELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 169 ~~~~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
.+++.|+.+|+.|...|+.|+++++++.+|
T Consensus 170 ~~~~~h~~al~~~~~~~~~v~~t~~~l~~l 199 (199)
T 1j2r_A 170 ASAEQHNNSINHIYPRIARVRSVEEILNAL 199 (199)
T ss_dssp SSHHHHHHHHHHTHHHHSEEECHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHheeEEeeHHHHHhhC
Confidence 999999999999999999999999999875
No 12
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=100.00 E-value=1.1e-44 Score=284.17 Aligned_cols=172 Identities=25% Similarity=0.256 Sum_probs=150.3
Q ss_pred CCCCCeEEEEEeccCccCCC---------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCC
Q 028963 19 PNPKSSVLLVIDMQNHFSSI---------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGT 89 (201)
Q Consensus 19 ~~~~~~aLlviD~Q~~f~~~---------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 89 (201)
..++++|||||||||+|+.+ .+.++++|++|+++||+.|+||||++++|.++........+||.| |.+|+
T Consensus 18 ~~~m~~ALlVID~QndF~~p~G~l~~~~~~~~ii~~i~~Li~~aR~~g~pVi~t~d~h~~~~~~~~~~~~~p~h-cv~gt 96 (211)
T 3o94_A 18 GSHMTKALISIDYTEDFVADSGKLTAGAPAQAISDAISKVTRLAFERGDYIFFTIDAHEENDCFHPESKLFPPH-NLIGT 96 (211)
T ss_dssp ---CCCEEEEESCBHHHHSTTCTTCCCHHHHTTHHHHHHHHHHHHHTTCEEEEEEECBCTTCTTCGGGGTSCSC-SBTTS
T ss_pred CCCCCeEEEEEcCchhhhCCCCcccCCccHHHHHHHHHHHHHHHHHcCCeEEEEEeecCCCCccCccccccccc-ccCCC
Confidence 35578999999999999952 245799999999999999999999999887543222345679988 99999
Q ss_pred CCccccccccCC-----CCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 90 ADAELLPEIKGL-----VAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 90 ~g~~~~~~l~~~-----~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
+|++++|+|.+. +.+++.+|.|.+||+|++|+|.++|+++|+++|+|+|++|++||++||++|+++||+|+|++|
T Consensus 97 ~G~el~~~L~~~~~~~~p~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~Gy~v~vv~D 176 (211)
T 3o94_A 97 SGRNLYGDLGIFYQEHGSDSRVFWMDKRHYSAFSGTDLDIRLRERRVSTVILTGVLTDISVLHTAIDAYNLGYDIEIVKP 176 (211)
T ss_dssp GGGSBCTHHHHHHHHHTTSTTEEEEEESSSSSSTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred hhHhhcHHHHHhhhhcCCCCCcEEEEecccCcCCCchHHHHHHhCCCCeEEEEeeccChHHHHHHHHHHHCCCEEEEech
Confidence 999999999721 167899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHhh-cceEEeeH
Q 028963 165 ATATSDLELHEATLKNLAY-GFAYLFDC 191 (201)
Q Consensus 165 a~~~~~~~~h~~al~~l~~-~~~~v~~~ 191 (201)
||++.+++.|+.+|+.|+. .|+.++++
T Consensus 177 a~~~~~~~~h~~aL~~m~~~~G~~i~ts 204 (211)
T 3o94_A 177 AVASIWPENHQFALGHFKNTLGAKLVDE 204 (211)
T ss_dssp EEECSCHHHHHHHHHHHHHTSCCEEECT
T ss_pred hhcCCCHHHHHHHHHHHHHHCCcEEech
Confidence 9999999999999999998 66666554
No 13
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=100.00 E-value=3e-44 Score=282.10 Aligned_cols=169 Identities=28% Similarity=0.357 Sum_probs=155.4
Q ss_pred CCCCCeEEEEEeccCccCCC--------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCC
Q 028963 19 PNPKSSVLLVIDMQNHFSSI--------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTA 90 (201)
Q Consensus 19 ~~~~~~aLlviD~Q~~f~~~--------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 90 (201)
++|.++|||||||||+|+++ .+.+++++++|+++||..|+||||+++.+++... .|.+|++
T Consensus 2 M~~~~tALlvID~Q~~f~~~~~~~~~~~~~~~i~~i~~Ll~~ar~~g~pVi~t~~~~p~~~~-----------~~~~gs~ 70 (211)
T 3oqp_A 2 MTTPRRALIVIDVQNEYVTGDLPIEYPDVQSSLANIARAMDAARAAGVPVVIVQNFAPAGSP-----------LFARGSN 70 (211)
T ss_dssp CCCCCEEEEEECCBGGGTTSSSCCCBSCHHHHHHHHHHHHHHHHHHTCCEEEEEECBCTTCS-----------SSBTTSG
T ss_pred CCCCCEEEEEEcCCHhhcCCccccCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEecCCCCCc-----------cccCCCC
Confidence 57889999999999999864 2468999999999999999999999987543211 2778999
Q ss_pred CccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCC
Q 028963 91 DAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSD 170 (201)
Q Consensus 91 g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~ 170 (201)
|++++|+|.+ .+++.+|.|++||+|++|+|.++|+++|+++|+|+|+.|++||++|+++|+++||+|+|++|||++++
T Consensus 71 g~~i~~~l~~--~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~ 148 (211)
T 3oqp_A 71 GAELHPVVSE--RARDHYVEKSLPSAFTGTDLAGWLAARQIDTLTVTGYMTHNCDASTINHAVHSGLAVEFLHDATGSVP 148 (211)
T ss_dssp GGSBCHHHHT--SCCSEEEEESSSCSSTTSSHHHHHHTTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEBCC
T ss_pred ccccccccCC--CCCcEEEECCccCCCcccHHHHHHHhCCCCEEEEEeeccCHHHHHHHHHHHHCCCeEEEechheeccc
Confidence 9999999999 88999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred ----------HHHHHHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 171 ----------LELHEATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 171 ----------~~~h~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
++.|+.++..|...|+.|+++++++.+|++
T Consensus 149 ~~~~~g~~~a~~~h~~~l~~l~~~~a~V~tt~e~l~~l~~ 188 (211)
T 3oqp_A 149 YENSAGFASAEEIHRVFSVVLQSRFAAVASTDEWIAAVQG 188 (211)
T ss_dssp EEETTEEECHHHHHHHHHHHHHHHTCEEECHHHHHHHHHH
T ss_pred cccccCCCCHHHHHHHHHHHHHhccEEEeEHHHHHHHHhc
Confidence 678999999999999999999999999853
No 14
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=100.00 E-value=2.3e-44 Score=280.19 Aligned_cols=177 Identities=26% Similarity=0.377 Sum_probs=162.5
Q ss_pred ccchhhhhhhhccCCCCCCeEEEEEeccCccCCC------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCcccccc
Q 028963 5 KCSSYEKYEIRKRNPNPKSSVLLVIDMQNHFSSI------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGE 78 (201)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~aLlviD~Q~~f~~~------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~ 78 (201)
-++.+...|.....++++++|||||||||+|+++ .+.+++++++|+++||..|+||||+++.+.+..
T Consensus 5 ~~~~~~~~g~~~~~~~~~~tALlvID~Q~~f~~g~l~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~~~------- 77 (197)
T 4h17_A 5 PTTMFRLTGRDYPPAKLSHASLIIIDAQKEYLSGPLKLSGMDEAVANIARLLDAARKSGRPIIHVRHLGTVGG------- 77 (197)
T ss_dssp CCCHHHHHTCCCCCCCGGGEEEEEECCBGGGGSSTTCCTTHHHHHHHHHHHHHHHHHTTCCEEEEEECCCTTS-------
T ss_pred chhHHHHhCCCCCCCCCCCeEEEEEcccchhhCCccCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEEecCCCC-------
Confidence 4566777888888899999999999999999862 467899999999999999999999999876421
Q ss_pred ccCCCccccCCCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCe
Q 028963 79 WWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFR 158 (201)
Q Consensus 79 ~~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~ 158 (201)
.+|..|++| +++|+|.+ .+++.+|.|++||+|++|+|.++|+++|+++|+|+|++|++||++||++|+++||+
T Consensus 78 ----~~~~~g~~g-~~~~~l~~--~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~ 150 (197)
T 4h17_A 78 ----RFDPQGPAG-QFIPGLEP--LEGEIVIEKRMPNAFKNTKLHETLQELGHLDLIVCGFMSHSSVSTTVRRAKDYGYR 150 (197)
T ss_dssp ----TTCTTSGGG-SBCTTCCC--CTTCEEEEESSSSTTTTTCHHHHHHHHTCSEEEEEEECTTTHHHHHHHHHHHTTCE
T ss_pred ----ccccCCCCc-cCCHhhCC--CCCCEEEeCCcCCCcccchHHHHHHhcCCCEEEEEeeCcCHHHHHHHHHHHHCCCE
Confidence 127788999 99999999 78999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCC----------HHHHHHHHHHHhhcceEEeeHHHHH
Q 028963 159 VFFSTDATATSD----------LELHEATLKNLAYGFAYLFDCERLE 195 (201)
Q Consensus 159 v~vv~Da~~~~~----------~~~h~~al~~l~~~~~~v~~~~e~~ 195 (201)
|+|++|||++.+ ++.|+.+|..|...|+.|++++|++
T Consensus 151 V~vv~Da~as~~~~~~~~~~~a~~~h~~aL~~l~~~~a~V~tt~e~i 197 (197)
T 4h17_A 151 CTLVEDASATRDLAFKDGVIPAAQIHQCEMAVMADNFACVAPTASLI 197 (197)
T ss_dssp EEEEEEEEECCCEEETTEEECHHHHHHHHHHHHHHHTCEEECGGGTC
T ss_pred EEEeCccccccCcccccCCCCHHHHHHHHHHHHHhcceEEeEHHHcC
Confidence 999999999998 8999999999999999999999874
No 15
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=100.00 E-value=3.9e-45 Score=290.12 Aligned_cols=182 Identities=28% Similarity=0.399 Sum_probs=159.6
Q ss_pred cCCCCCCeEEEEEeccCccCCC-------------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCC-c-----cccc
Q 028963 17 RNPNPKSSVLLVIDMQNHFSSI-------------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPAD-Y-----GMLG 77 (201)
Q Consensus 17 ~~~~~~~~aLlviD~Q~~f~~~-------------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~-~-----~~~~ 77 (201)
..++++++|||||||||+|+++ .+.+++++++|+++||+.|+||||+++.+.+... . +.+.
T Consensus 19 ~~l~~~~tALlVID~Qndf~~~~g~l~~~~~~~~~~~~vv~~i~~Ll~~ar~~g~pVi~~~~~~~~~~~~~~~~~~~~~~ 98 (226)
T 3kl2_A 19 LELDPARTAIVLIEYQNEFTSDGGVLHGAVADVMQHTGMLANTVAVVDAARQAGVPIMHAPITFAEGYGELTRHPYGILK 98 (226)
T ss_dssp CCCCGGGEEEEEECCBHHHHSTTCTTHHHHHHHHHHHTHHHHHHHHHHHHHHHTCCEEEECCCBCTTCTTSCSSCCTHHH
T ss_pred ccCCCCCeEEEEEcCchhhhCCCccccccccccccHHHHHHHHHHHHHHHHHcCCeEEEEEeeeCCCccccccccchhhh
Confidence 4578899999999999999863 2358999999999999999999999998764321 0 0011
Q ss_pred c-ccCCCccccCCCCccccccccCCCCCCCEEEECCC-CCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhC
Q 028963 78 E-WWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNT-YSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVR 155 (201)
Q Consensus 78 ~-~~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~-~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~ 155 (201)
. .|+.+ |.+|++|++++|+|.| .+++.+|.|.+ ||+|++|+|.++|+++|+++|+|+|++|++||++||++|+++
T Consensus 99 ~~~~~~~-~~~gt~g~ei~~~L~p--~~~d~vi~Kk~~~SaF~~t~L~~~L~~~gi~~lii~G~~T~~CV~~Ta~da~~~ 175 (226)
T 3kl2_A 99 GVVDGKA-FVKGTWGAAIVDELAP--VNGDIVIEGKRGLDTFASTNLDFILRSKGVDTIVLGGFLTNCCVESTMRTGYER 175 (226)
T ss_dssp HHHHHTC-SBTTSTTTSBCGGGCC--CTTCEECCCCCSSSHHHHSSHHHHHHHHTCCEEEEEEECTTTHHHHHHHHHHHT
T ss_pred cccCCCc-ccCCCcccccCHhhCC--CCCCEEEecCCccCCccCchHHHHHhCCCCCcEEEeccCcchHHHHHHHHHHHC
Confidence 1 14555 9999999999999999 88999998765 999999999999999999999999999999999999999999
Q ss_pred CCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhhcCC
Q 028963 156 GFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAGLFGP 201 (201)
Q Consensus 156 G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l~~~ 201 (201)
||+|+|++|||++.+++.|+.+|+.+...++.|+|++|++++|.++
T Consensus 176 Gy~v~vv~Da~~s~~~~~h~~aL~~~~~~~a~v~tt~e~l~~~~~~ 221 (226)
T 3kl2_A 176 GFRVITLTDCVAATSQEEHNNAISYDFPMFSVPMTSADVIAALEGH 221 (226)
T ss_dssp TCEEEEEEEEEECSCHHHHHHHHHHTHHHHSEEECHHHHHHHHC--
T ss_pred CCEEEEechhhcCCCHHHHHHHHHHHHHhceEEeeHHHHHHHhhcc
Confidence 9999999999999999999999998888899999999999999873
No 16
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=100.00 E-value=1.3e-43 Score=276.45 Aligned_cols=179 Identities=21% Similarity=0.285 Sum_probs=155.8
Q ss_pred cCCCCCCeEEEEEeccCccCCC------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCC-Ccc--ccccccCCCcccc
Q 028963 17 RNPNPKSSVLLVIDMQNHFSSI------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPA-DYG--MLGEWWNGDLVYD 87 (201)
Q Consensus 17 ~~~~~~~~aLlviD~Q~~f~~~------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~-~~~--~~~~~~~~~~~~~ 87 (201)
..++| ++|||||||||+|++. .+.+++++++|+++||..|+||||+++.+.+.. +.. .....|+.+ +.
T Consensus 8 ~~l~~-~tALlvID~Q~~f~~~~~~~~~~~~~i~~i~~Li~~ar~~g~pVi~t~~~~~~d~~~~~~~~~~~~~~~~-~~- 84 (199)
T 3txy_A 8 PTLNP-TVALVAIDLQNGIVVLPMVPQSGGDVVAKTAELANAFRARKLPVIFVHTSYQPDGAVALKVKTDVPPSPP-NL- 84 (199)
T ss_dssp CCCCS-SEEEEEECCBHHHHTSCCBSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTSTTSCCCCCSSCCCCC-CC-
T ss_pred cCcCC-CeEEEEEcCchhhhCCCcCCCCHHHHHHHHHHHHHHHHHcCCcEEEEEeeecCCccccccccccCCCccc-CC-
Confidence 45788 9999999999999863 357999999999999999999999999766421 110 011123333 22
Q ss_pred CCCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCC
Q 028963 88 GTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATA 167 (201)
Q Consensus 88 g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~ 167 (201)
++.+++++|+|.+ .+++.+|.|++||+|++|+|.++|+++|+++|+|+|+.|++||++||++|+++||+|+|++|||+
T Consensus 85 ~~~~~~i~~~L~~--~~~~~vi~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~t~~CV~~Ta~~a~~~G~~v~v~~Da~~ 162 (199)
T 3txy_A 85 DPEWSAFAPALGV--QPLDVVVTKHQWGAFTGTDLDVQLRRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSDAVS 162 (199)
T ss_dssp CHHHHSBCGGGCC--CTTSEEEEESSSSSSTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCcHHhhChhhCC--CCCeEEEECCCcCccccCcHHHHHHhCCCCEEEEEeeccCHHHHHHHHHHHHCCCEEEEecHhhc
Confidence 2446899999999 78999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 168 TSDLELHEATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 168 ~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
+.+++.|+.+++.|...|+.|+++++++.+|++
T Consensus 163 ~~~~~~~~~al~~~~~~~~~v~tt~~~l~~l~~ 195 (199)
T 3txy_A 163 TWSTDAQTFALTQIFPKLGQVATAADVEAALET 195 (199)
T ss_dssp BSCHHHHHHHHHHTHHHHSEEECHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHhhceEEeeHHHHHHHHhc
Confidence 999999999999999999999999999999975
No 17
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=100.00 E-value=4.8e-44 Score=276.06 Aligned_cols=164 Identities=26% Similarity=0.336 Sum_probs=149.9
Q ss_pred eEEEEEeccCccCCC-------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCC----ccccccccCCCccccCCCCc
Q 028963 24 SVLLVIDMQNHFSSI-------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPAD----YGMLGEWWNGDLVYDGTADA 92 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~-------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~----~~~~~~~~~~~~~~~g~~g~ 92 (201)
+|||||||||+|++. .+.+++++++|++++|+ +.||||++++|..|.+ .+.+...||.| |.+|++|+
T Consensus 2 ~ALlvID~Q~df~~~g~l~~~~~~~vv~~i~~li~~~r~-~~~Vi~t~d~h~~p~~~~~~~~~~~~~wp~h-c~~gt~g~ 79 (186)
T 3gbc_A 2 RALIIVDVQNDFCEGGSLAVTGGAALARAISDYLAEAAD-YHHVVATKDFHIDPGDHFSGTPDYSSSWPPH-CVSGTPGA 79 (186)
T ss_dssp EEEEEECCBGGGSTTSTTCCTTHHHHHHHHTTSSSSCCC-CSEEEEEEECBSCCGGGBCSSCCSSSCBCCC-SBTTSGGG
T ss_pred eEEEEEcCCCcCCCCCcccCCCHHHHHHHHHHHHHHhcc-CCEEEEEEEEcCCCCcccccCccccccCccc-ccCCCCcc
Confidence 799999999999962 45789999999999998 9999999998864322 12345679988 99999999
Q ss_pred cccccccCCCCCCCEEEECCC----CCCCC-----CCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEec
Q 028963 93 ELLPEIKGLVAGADEVIEKNT----YSAFG-----NTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFST 163 (201)
Q Consensus 93 ~~~~~l~~~~~~~~~vv~K~~----~saf~-----~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~ 163 (201)
+++|+|.+ .+++.+|.|++ ||+|. +|+|.++|+++|+++|+|+|++|++||.+||++|+++||+|+|++
T Consensus 80 ~~~~~l~~--~~~d~vi~K~~~~~~ysaF~~~~~~~t~L~~~L~~~gi~~lvv~G~~t~~CV~~Ta~da~~~G~~v~v~~ 157 (186)
T 3gbc_A 80 DFHPSLDT--SAIEAVFYKGAYTGAYSGFEGVDENGTPLLNWLRQRGVDEVDVVGIATDHCVRQTAEDAVRNGLATRVLV 157 (186)
T ss_dssp SBCSSSCC--TTCCEEEEECSSSCCCCGGGCBCSSSCBHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEE
T ss_pred cCChhhhc--cCCcEEEECCCCCccccccccCCCCCCcHHHHHHhcCCCEEEEEEecccHHHHHHHHHHHHCCCeEEEEh
Confidence 99999999 78999999998 69999 899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 164 DATATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 164 Da~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
|||++.+++.|+.+|+.|+..|+.++++
T Consensus 158 Da~~~~~~~~~~~al~~m~~~G~~i~~s 185 (186)
T 3gbc_A 158 DLTAGVSADTTVAALEEMRTASVELVCS 185 (186)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEECC
T ss_pred hhcCCCCHHHHHHHHHHHHHcCCEEeec
Confidence 9999999999999999999999999886
No 18
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=100.00 E-value=8.5e-44 Score=282.20 Aligned_cols=180 Identities=28% Similarity=0.302 Sum_probs=160.3
Q ss_pred hccCCCCCCeEEEEEeccCccC-C-------CchhHHHHHHHHHHHHHHCCCcEEEEecccCCCC-CccccccccCCCcc
Q 028963 15 RKRNPNPKSSVLLVIDMQNHFS-S-------IAKPILDNTLATVQLCRRASIPVFFTRHCHKSPA-DYGMLGEWWNGDLV 85 (201)
Q Consensus 15 ~~~~~~~~~~aLlviD~Q~~f~-~-------~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~-~~~~~~~~~~~~~~ 85 (201)
....++++++|||||||||+|+ + ..+.++++|++|++++|. .||||++++|++.. ++......||.| |
T Consensus 26 ~~~~l~~~~~ALlVIDmQndF~~p~G~l~~~~~~~iv~~i~~Li~~ar~--~pVi~t~d~h~~~~~~f~~~~g~wp~h-~ 102 (227)
T 3r2j_A 26 LCVTVSSTTDVLIIADMQVDFLAPGGSLHVKGGEALLDGINAVSSQLPF--RYQVATQDWHPENHCSFVTHGGPWPPH-C 102 (227)
T ss_dssp CCEECCTTTEEEEEECCBHHHHSTTCSSCCTTCGGGHHHHHHHHHHSCC--SEEEEEEECBCTTCTTBGGGTSSBCSC-S
T ss_pred CCcccCCCCeEEEEEcCchHhhCCCCccCCCCHHHHHHHHHHHHHHcCC--CeEEEEEeeCCCCccchhhhcCcCccc-c
Confidence 4445788999999999999999 3 146799999999999885 59999999986432 222223568888 9
Q ss_pred ccCCCCccccccccCCCCCCCEEEECC------CCCCC-----CCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHh
Q 028963 86 YDGTADAELLPEIKGLVAGADEVIEKN------TYSAF-----GNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFV 154 (201)
Q Consensus 86 ~~g~~g~~~~~~l~~~~~~~~~vv~K~------~~saf-----~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~ 154 (201)
.+|++|++++|+|.+ .+++.+|.|. +||+| .+|+|.++|+++|+++|+|+|++|++||++||++|++
T Consensus 103 ~~gt~G~ei~~~L~~--~~~d~vi~K~~~~~~~~~SaF~~~~~~~t~L~~~L~~~gi~~lvv~G~~T~~CV~~Ta~dA~~ 180 (227)
T 3r2j_A 103 VQGSAGAQLHAGLHT--QRINAVIRKGVTQQADSYSAFVEDNGVSTGLAGLLHSIGARRVFVCGVAYDFCVFFTAMDARK 180 (227)
T ss_dssp BTTSGGGSBCTTSCC--TTCCEEEEESCSTTCCCSSSSBCTTSCBCSHHHHHHHHTCCEEEEEESCTTTHHHHHHHHHHH
T ss_pred cCCCchhHHhHhhcc--cCCCEEEECCCcccccccchhccCCCCCCcHHHHHHHcCCCEEEEEEeccchHHHHHHHHHHH
Confidence 999999999999999 7899999999 99999 7999999999999999999999999999999999999
Q ss_pred CCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhhc
Q 028963 155 RGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAGLF 199 (201)
Q Consensus 155 ~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l~ 199 (201)
+||+|+|++|||++.+++.|+.+|+.|+..|+.|+++++++.+|.
T Consensus 181 ~Gy~V~Vv~Da~as~~~~~h~~aL~~m~~~g~~v~~s~~vl~~~~ 225 (227)
T 3r2j_A 181 NGFSVVLLEDLTAAVDDAAWSARTAELKDAGVVLLKSSALVAEGT 225 (227)
T ss_dssp TTCEEEEEEEEECCSCGGGHHHHHHHHHTTTCEEECGGGEECC--
T ss_pred CCCEEEEEhHhhCCCCHHHHHHHHHHHHHcCCEEEEHHHHHHHhc
Confidence 999999999999999999999999999999999999999988774
No 19
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=100.00 E-value=1.6e-42 Score=266.35 Aligned_cols=164 Identities=27% Similarity=0.409 Sum_probs=148.3
Q ss_pred CCeEEEEEeccCccCCC-------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCC-CccccccccCCCccccCCCCcc
Q 028963 22 KSSVLLVIDMQNHFSSI-------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPA-DYGMLGEWWNGDLVYDGTADAE 93 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~-------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~g~~ 93 (201)
+++|||||||||+|++. .+.+++++++|+++||+.|+||||+++.|.++. ++......||.| |.+|++|++
T Consensus 2 ~~~aLlvID~Q~~f~~~g~l~~~~~~~~v~~i~~l~~~ar~~g~pVi~t~~~~~~~~~~f~~~~~~~p~~-~~~gt~g~~ 80 (180)
T 1im5_A 2 PEEALIVVDMQRDFMPGGALPVPEGDKIIPKVNEYIRKFKEKGALIVATRDWHPENHISFRERGGPWPRH-CVQNTPGAE 80 (180)
T ss_dssp CCEEEEEECCBGGGSTTSSSCCTTGGGGHHHHHHHHHHHHHTTCEEEEEEECBCTTCTTBGGGTCSBCSC-SBTTSGGGS
T ss_pred CccEEEEEcCCCccCCCCcccCCCHHHHHHHHHHHHHHHHHcCCEEEEEecccCCCCcChhhcCCCCchh-hcCCCCCeE
Confidence 47899999999999942 357999999999999999999999999987542 222334568888 999999999
Q ss_pred ccccccCCCCCCCEEEECCC------CCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCC
Q 028963 94 LLPEIKGLVAGADEVIEKNT------YSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATA 167 (201)
Q Consensus 94 ~~~~l~~~~~~~~~vv~K~~------~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~ 167 (201)
++ |.+ .+++.+|.|++ ||+|++|+|.++|+++|+++|+|+|++|++||++||++|+++||+|+|++|||+
T Consensus 81 i~--l~~--~~~~~vi~K~~~~~~~~~saF~~t~L~~~L~~~gi~~lvi~G~~t~~CV~~Ta~da~~~Gy~v~vv~Da~~ 156 (180)
T 1im5_A 81 FV--VDL--PEDAVIISKATEPDKEAYSGFEGTDLAKILRGNGVKRVYICGVATEYCVRATALDALKHGFEVYLLRDAVK 156 (180)
T ss_dssp BC--SCC--CTTCEEEEECCSTTCCCCSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred EE--Eec--CCCcEEEECCCCCCCccccCccCCCHHHHHHhCCCCEEEEEEeecCHHHHHHHHHHHHCCCEEEEehhhcc
Confidence 98 775 45699999999 999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHhhcceEEee
Q 028963 168 TSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 168 ~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+.+++.|+.+|+.|+..|+.|++
T Consensus 157 ~~~~~~h~~al~~m~~~g~~v~~ 179 (180)
T 1im5_A 157 GIKPEDEERALEEMKSRGIKIVQ 179 (180)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCEEEe
Confidence 99999999999999999999886
No 20
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=100.00 E-value=2e-43 Score=289.67 Aligned_cols=177 Identities=28% Similarity=0.455 Sum_probs=160.3
Q ss_pred CCCCCCeEEEEEeccCccCCC-------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCC-CccccccccCCCccccCC
Q 028963 18 NPNPKSSVLLVIDMQNHFSSI-------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPA-DYGMLGEWWNGDLVYDGT 89 (201)
Q Consensus 18 ~~~~~~~aLlviD~Q~~f~~~-------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 89 (201)
.++++++|||||||||+|++. .+.+++++++++++||..|+||||+++.+.+.. +.+.....|+.+ |..|+
T Consensus 27 ~l~~~~~ALlvID~Q~~f~~~~~~~~~~~~~~i~~i~~L~~~ar~~g~pVi~t~~~~~~~~~~~~~~~~~~~~~-~~~g~ 105 (287)
T 2fq1_A 27 AFEPQRAALLIHDMQDYFVSFWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPG-LTRSP 105 (287)
T ss_dssp CCCGGGEEEEEECCBHHHHTTSCTTCHHHHHHHHHHHHHHHHHHHTTCCEEEEECCSCCCHHHHTTHHHHHTTG-GGGCG
T ss_pred cCCCCCEEEEEECCchHhhCccccccchHHHHHHHHHHHHHHHHHcCCeEEEEeecCCCChhhhhhhhhhccCC-CCCCC
Confidence 367789999999999999864 256899999999999999999999998765321 112233467777 88999
Q ss_pred CCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCC
Q 028963 90 ADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATS 169 (201)
Q Consensus 90 ~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~ 169 (201)
+|++++++|.| .+++.+|.|++||+|++|+|.++|+++|+++|||+|+.|++||.+||++|+++||+|+|++|||++.
T Consensus 106 ~g~ei~~~l~p--~~~d~vi~K~~~saF~~t~L~~~L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~ 183 (287)
T 2fq1_A 106 EQQKVVDRLTP--DADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVADALADF 183 (287)
T ss_dssp GGCSBCGGGCC--CTTSEEEECCSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECS
T ss_pred chhhcccccCC--CCCCEEEeCCccCCcCCCcHHHHHHHCCCCEEEEEEeCcchHHHHHHHHHHHCCCEEEEechhccCC
Confidence 99999999999 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHhhcceEEeeHHHHHHh
Q 028963 170 DLELHEATLKNLAYGFAYLFDCERLEAG 197 (201)
Q Consensus 170 ~~~~h~~al~~l~~~~~~v~~~~e~~~~ 197 (201)
+++.|+.+++.|...|+.|+++++++++
T Consensus 184 ~~~~h~~al~~m~~~~~~v~~t~~v~~~ 211 (287)
T 2fq1_A 184 SRDEHLMSLKYVAGRSGRVVMTEELLPA 211 (287)
T ss_dssp SHHHHHHHHHHHHHHTCEEECHHHHSSS
T ss_pred CHHHHHHHHHHHHHhCcEEeeHHHHHhC
Confidence 9999999999999999999999999876
No 21
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=100.00 E-value=4.3e-42 Score=274.19 Aligned_cols=172 Identities=27% Similarity=0.365 Sum_probs=150.9
Q ss_pred CCCCeEEEEEeccCccCCC-------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCC-Ccc-------cc--------
Q 028963 20 NPKSSVLLVIDMQNHFSSI-------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPA-DYG-------ML-------- 76 (201)
Q Consensus 20 ~~~~~aLlviD~Q~~f~~~-------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~-~~~-------~~-------- 76 (201)
.++++|||||||||+|++. .+.+++++++|+++ +.||||++++|++.. ++. .+
T Consensus 27 ~~~~~ALlVID~Qndf~~~g~l~~~~~~~vv~~i~~Li~~----~~pVi~t~~~h~~~~~~f~~~~~~~~~~~~~~~~~~ 102 (235)
T 2wt9_A 27 QPQNSALVVVDVQNGFTPGGNLAVADADTIIPTINQLAGC----FENVVLTQDWHPDNHISFAANHPGKQPFETIELDYG 102 (235)
T ss_dssp CCTTEEEEEECCBGGGSTTSTTCCTTGGGGHHHHHHHHTT----CSCEEEEEECBCTTCTTBGGGSTTCCTTCEEEETTE
T ss_pred CCCCeEEEEEcCCcCcCCCCccCCCCHHHHHHHHHHHHHc----CCEEEEEeccCCCcchhhHhcCCCCCcccccccccc
Confidence 4788999999999999952 45789999999976 489999999875431 110 11
Q ss_pred -ccccCCCccccCCCCccccccccCCCCCCCEEEECC------CCCCCC------CCchHHHHHhCCCcEEEEeeccCch
Q 028963 77 -GEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKN------TYSAFG------NTRLQERLVGMGVEEVIVCGVMTNL 143 (201)
Q Consensus 77 -~~~~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~------~~saf~------~t~L~~~L~~~gi~~lvi~G~~T~~ 143 (201)
..+||.| |.+|++|++++|+|.+ .+++.+|.|. +||+|+ +|+|.++|+++||++|+|+|++|++
T Consensus 103 ~~~~wp~h-cv~gt~g~~i~~~L~~--~~~d~vi~K~~~~~~~~~SaF~~~~~~~~T~L~~~L~~~gi~~lvv~G~~T~~ 179 (235)
T 2wt9_A 103 SQVLWPKH-CIQGTHDAEFHPDLNI--PTAQLIIRKGFHAHIDSYSAFMEADHTTMTGLTGYLKERGIDTVYVVGIATDF 179 (235)
T ss_dssp EEECBCSC-CBTTSGGGSBCTTCCC--TTCCEEEEECCSTTCCCSSSSBCTTSCCBCSHHHHHHHTTCCEEEEEEECTTT
T ss_pred cccCCcch-hcCCCchhHhChhhcc--cCCCEEEECCCCCCCccccccccCCccCCCcHHHHHHHCCCCEEEEEEeCccH
Confidence 1468888 9999999999999999 7899999997 699997 7999999999999999999999999
Q ss_pred hHHHHHHHHHhCCCeEEEecCCCCCCC-HHHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 144 CCETTARDAFVRGFRVFFSTDATATSD-LELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 144 CV~~Ta~~a~~~G~~v~vv~Da~~~~~-~~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
||++||++|+++||+|+|++|||++.+ ++.|+.+|+.|+..|+.|+++++++.+|
T Consensus 180 CV~~Ta~dA~~~Gy~V~Vv~Da~as~~~~~~~~~aL~~m~~~g~~v~tt~~vl~el 235 (235)
T 2wt9_A 180 CVAWTALDAVKQGFKTLVIEDACKGIDLNGSLEQAWQTMQQQGVVRIQSTDLLNEC 235 (235)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEECCCSTTHHHHHHHHHHHTTCEEECHHHHC---
T ss_pred HHHHHHHHHHhCCCEEEEechhccCCChhHHHHHHHHHHHHcCCEEEEHHHHHhcC
Confidence 999999999999999999999999999 9999999999999999999999998875
No 22
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=100.00 E-value=3.5e-41 Score=255.90 Aligned_cols=153 Identities=25% Similarity=0.344 Sum_probs=141.2
Q ss_pred CCeEEEEEeccCccCCC------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCcccc
Q 028963 22 KSSVLLVIDMQNHFSSI------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELL 95 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~ 95 (201)
+++|||||||||+|+++ .+.+++++++|+++||..|+||||+++.+. .|.+|++|++++
T Consensus 3 m~~aLlvID~Q~~f~~~~~~~~~~~~~~~~i~~li~~ar~~g~pVi~t~~~~~---------------~~~~g~~g~~i~ 67 (167)
T 2a67_A 3 KNRALLLIDFQKGIESPTQQLYRLPAVLDKVNQRIAVYRQHHAPIIFVQHEET---------------ELPFGSDSWQLF 67 (167)
T ss_dssp SSEEEEEECCBTTSCCSSCCCTTHHHHHHHHHHHHHHHHHTTCCEEEEEECBT---------------TBCTTSTTTSBC
T ss_pred CCcEEEEEcCcHHhcCCCCcccCHHHHHHHHHHHHHHHHHCCCeEEEEEeCCC---------------CccCCCCcceec
Confidence 57999999999999964 346899999999999999999999998531 278899999999
Q ss_pred ccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHH---
Q 028963 96 PEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLE--- 172 (201)
Q Consensus 96 ~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~--- 172 (201)
|+|.| .+++.+|.|++||+|.+|+|.++|+++|+++|+|+|+.|++||++||++|+++||+|+|++|||++.+++
T Consensus 68 ~~l~~--~~~~~vi~K~~~saF~~t~L~~~L~~~gi~~lvv~G~~T~~CV~~Ta~da~~~Gy~v~v~~Da~~s~~~~~~~ 145 (167)
T 2a67_A 68 EKLDT--QPTDFFIRKTHANAFYQTNLNDLLTEQAVQTLEIAGVQTEFCVDTTIRMAHGLGYTCLMTPKTTSTLDNGHLT 145 (167)
T ss_dssp TTSCC--CTTSEEEEESSSSTTTTSSHHHHHHHTTCCEEEEEEECTTTHHHHHHHHHHHHTCEEEECTTCEECCCCSSSC
T ss_pred hhhCC--CCCCEEEECCCCCCCCCCcHHHHHHHCCCCEEEEEecccChHHHHHHHHHHHCCCEEEEechhhcCCCcccCC
Confidence 99999 7889999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred ---HHHHHHHHHhhcceEEeeH
Q 028963 173 ---LHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 173 ---~h~~al~~l~~~~~~v~~~ 191 (201)
.|+..+..|..++++|+++
T Consensus 146 a~~~~~~~l~~l~~~~a~v~~t 167 (167)
T 2a67_A 146 AAQIIQHHEAIWAGRFLTFLSL 167 (167)
T ss_dssp HHHHHHHHHHHHBTTTBEECC-
T ss_pred HHHHHHHHHHHHhccceEEEeC
Confidence 8999999999899999875
No 23
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=100.00 E-value=6.8e-42 Score=269.69 Aligned_cols=166 Identities=23% Similarity=0.286 Sum_probs=146.8
Q ss_pred eEEEEEeccCccCCC--------chhHHHHHHHHHHHHHHCCCcEEEEecccCCCC-Cc-------cc------------
Q 028963 24 SVLLVIDMQNHFSSI--------AKPILDNTLATVQLCRRASIPVFFTRHCHKSPA-DY-------GM------------ 75 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~--------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~-~~-------~~------------ 75 (201)
+|||||||||||+++ ++.++++|++++++||+.+.||||++++|++.. ++ .+
T Consensus 2 ~ALlvID~QndF~~p~G~l~v~~~~~iv~~i~~ll~~~r~~~~~Vi~t~d~H~~~h~sf~~~~~g~~~f~~~~~~~p~~~ 81 (216)
T 3v8e_A 2 KTLIVVDMQNDFISPLGSLTVPKGEELINPISDLMQDADRDWHRIVVTRDWHPSRHISFAKNHKDKEPYSTYTYHSPRPG 81 (216)
T ss_dssp EEEEEECCBHHHHSTTSTTCCTTGGGGHHHHHHHHHCGGGCEEEEEEEEECBCTTCTTBGGGSTTCCTTCEEEEECSSTT
T ss_pred cEEEEEcCcccccCCCCcccCCCHHHHHHHHHHHHHHHhhcCCEEEEecccCCCcCcchHhcCCCCCCcceeeccccccc
Confidence 799999999999932 467999999999999999999999999987532 11 01
Q ss_pred -----cccccCCCccccCCCCccccccccCCC-CCCCEEEEC------CCCCCC------CCCchHHHHHhCCCcEEEEe
Q 028963 76 -----LGEWWNGDLVYDGTADAELLPEIKGLV-AGADEVIEK------NTYSAF------GNTRLQERLVGMGVEEVIVC 137 (201)
Q Consensus 76 -----~~~~~~~~~~~~g~~g~~~~~~l~~~~-~~~~~vv~K------~~~saf------~~t~L~~~L~~~gi~~lvi~ 137 (201)
...+||.| |++|++|++++|+|.+.+ .+++.+|.| .+||+| .+|+|.++|+++|+++|+|+
T Consensus 82 ~~~~~~~~~wp~h-cv~gt~G~ei~~~l~~~~~~~~~~vi~K~~~~~~~~ySaF~~~~~~~~t~L~~~L~~~gi~~l~i~ 160 (216)
T 3v8e_A 82 DDSTQEGILWPVH-CVKNTWGSQLVDQIMDQVVTKHIKIVDKGFLTDREYYSAFHDIWNFHKTDMNKYLEKHHTDEVYIV 160 (216)
T ss_dssp CCCEEEEECBCSC-CBTTSGGGSBCHHHHHHHHHHTCEEEEECCSTTSCCCSSSBCTTSCSBCSHHHHHHHTTCCEEEEE
T ss_pred cccccccccCchh-hcCCCCccccCHhHHhhhccCccEEEECCccCCCccccccccCCcCCCchHHHHHHhCCCCEEEEE
Confidence 13479998 999999999999998721 157899999 578999 48999999999999999999
Q ss_pred eccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHH--HHHHHHHHHhhcceEEee
Q 028963 138 GVMTNLCCETTARDAFVRGFRVFFSTDATATSDLE--LHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 138 G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~--~h~~al~~l~~~~~~v~~ 190 (201)
|++|++||.+||++|+++||+|+|++|||++.+++ .|+.+|+.|+..|+.+++
T Consensus 161 G~~t~~CV~~Ta~~a~~~g~~v~v~~Da~~~~~~~~~~~~~al~~m~~~Gv~i~~ 215 (216)
T 3v8e_A 161 GVALEYXVKATAISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVVD 215 (216)
T ss_dssp EECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSCCHHHHHHHHHHHHHTTCEEEC
T ss_pred EeccccHHHHHHHHHHHCCCEEEEeccccCCCCcccHHHHHHHHHHHHcCCEEeC
Confidence 99999999999999999999999999999999988 999999999999998875
No 24
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=100.00 E-value=7.1e-41 Score=262.56 Aligned_cols=162 Identities=22% Similarity=0.345 Sum_probs=146.1
Q ss_pred CCCCCCeEEEEEeccCccCCC-----chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCc
Q 028963 18 NPNPKSSVLLVIDMQNHFSSI-----AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADA 92 (201)
Q Consensus 18 ~~~~~~~aLlviD~Q~~f~~~-----~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~ 92 (201)
.++++++|||||||||+|++. .+.+++++++++++||..|+||||+++.+.. +++
T Consensus 7 ~l~~~~tALlvID~Q~~f~~~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~~--------------------~~~ 66 (208)
T 1yac_A 7 RLDKNDAAVLLVDHQAGLLSLVRDIEPDKFKNNVLALGDLAKYFNLPTILTTSAETG--------------------PNG 66 (208)
T ss_dssp CCCTTSEEEEEECCBTTGGGGCCSSCHHHHHHHHHHHHHHHHHTTCCEEEEEESTTT--------------------TTC
T ss_pred cCCCCCeEEEEEcCchhhhcccccccHHHHHHHHHHHHHHHHHcCCcEEEEEecCCC--------------------CCC
Confidence 478899999999999999863 2578999999999999999999999975321 244
Q ss_pred cccccccCCCCCCCEEEECC-CCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCH
Q 028963 93 ELLPEIKGLVAGADEVIEKN-TYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDL 171 (201)
Q Consensus 93 ~~~~~l~~~~~~~~~vv~K~-~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~ 171 (201)
+++|++.+. .+++.+|.|+ +||+|.+|+|.++|+++|+++|+|+|++|++||++||++|+++||+|+|++|||++.++
T Consensus 67 ~~~~~l~~~-~~~~~vi~K~~~~saF~~t~L~~~L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as~~~ 145 (208)
T 1yac_A 67 PLVPELKAQ-FPDAPYIARPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTDASGTFNE 145 (208)
T ss_dssp CBCHHHHHH-CTTSCEEEESSCSSGGGSHHHHHHHHHTTCSEEEEEEBSCCCCCHHHHHHHHHTTCEEEEETTSCBCSSH
T ss_pred cccHHHHhh-CCCCeEEeeCCccCCCCCchHHHHHHhcCCCEEEEEEeccchhHHHHHHHHHHCCCEEEEECcccCCCCH
Confidence 678888763 3577888887 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 172 ELHEATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 172 ~~h~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
+.|+.+++.|...|+.|+++++++.+|.+
T Consensus 146 ~~h~~al~~m~~~g~~v~~t~~~l~~l~~ 174 (208)
T 1yac_A 146 ITRHSAWDRMSQAGAQLMTWFGVACELHR 174 (208)
T ss_dssp HHHHHHHHHHHHHTCEEECHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCEEeeHHHHHHHHHH
Confidence 99999999999999999999999998854
No 25
>2b34_A F35G2.2, MAR1 ribonuclease; isochorismatase family, structural genomics, PSI, protein structure initiative; 2.14A {Caenorhabditis elegans}
Probab=100.00 E-value=6.8e-40 Score=255.30 Aligned_cols=159 Identities=25% Similarity=0.346 Sum_probs=143.0
Q ss_pred CCCCCCeEEEEEeccCccCCC---chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCccc
Q 028963 18 NPNPKSSVLLVIDMQNHFSSI---AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAEL 94 (201)
Q Consensus 18 ~~~~~~~aLlviD~Q~~f~~~---~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~ 94 (201)
.++++++|||||||||+|++. .+.+++++++++++||..|+||||+++.+. . .|++++++
T Consensus 9 ~l~~~~~ALlvID~Q~~f~~~~~~~~~~i~~i~~l~~~ar~~g~pVi~t~~~~~---~--------------~g~~~~el 71 (199)
T 2b34_A 9 RINPTNSALFVCDLQEKFASNIKYFPEIITTSRRLIDAARILSIPTIVTEQYPK---G--------------LGHTVPTL 71 (199)
T ss_dssp CCCTTTEEEEEECCBGGGTTSSTTHHHHHHHHHHHHHHHHHTTCCEEEEEESHH---H--------------HCCBCHHH
T ss_pred cCCCCCEEEEEEeCHhHHhhhcCCHHHHHHHHHHHHHHHHHCCCcEEEEEecCC---C--------------CCCChHHH
Confidence 378899999999999999964 467999999999999999999999997532 1 26677777
Q ss_pred cccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHH
Q 028963 95 LPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELH 174 (201)
Q Consensus 95 ~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h 174 (201)
.|++ | .++.+|.|++||+|.+| |.++|++ +++|+|+|+.|++||++||++|+++||+|+|++|||++.+++.|
T Consensus 72 ~~~l-~---~~~~vi~K~~~saF~~t-L~~~L~~--i~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~~h 144 (199)
T 2b34_A 72 KEGL-A---ENTPIFDKTKFSMCIPP-TEDTLKK--VQNVILVGIEAHVCVLQTTYDLLERGLNVHVVVDAVSSRSHTDR 144 (199)
T ss_dssp HHHS-C---TTCCEEEESBSSSCCGG-GHHHHTT--CSEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSHHHH
T ss_pred HhhC-C---CCCeeeecCccCCcccH-HHHHHcC--CCEEEEEEEecCHHHHHHHHHHHHCCCEEEEeCcccCCCCHHHH
Confidence 7765 3 23889999999999998 9999998 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcceEEeeHHHHHHhhcC
Q 028963 175 EATLKNLAYGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 175 ~~al~~l~~~~~~v~~~~e~~~~l~~ 200 (201)
+.+++.|+..|+.|+++++++.+|.+
T Consensus 145 ~~al~~m~~~g~~v~~t~~~l~~l~~ 170 (199)
T 2b34_A 145 HFAFKQMEQAGAILTTSEATILGLVG 170 (199)
T ss_dssp HHHHHHHHHHTCEEECHHHHHHHHHC
T ss_pred HHHHHHHHHCCCEEecHHHHHHHHHH
Confidence 99999999999999999999988743
No 26
>1yzv_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.00A {Trypanosoma cruzi}
Probab=100.00 E-value=7.6e-40 Score=255.75 Aligned_cols=162 Identities=15% Similarity=0.149 Sum_probs=145.7
Q ss_pred hccCCCCCCeEEEEEeccCccCCC---chhHHHHHHHHHHHHHHCCCc---EEEEecccCCCCCccccccccCCCccccC
Q 028963 15 RKRNPNPKSSVLLVIDMQNHFSSI---AKPILDNTLATVQLCRRASIP---VFFTRHCHKSPADYGMLGEWWNGDLVYDG 88 (201)
Q Consensus 15 ~~~~~~~~~~aLlviD~Q~~f~~~---~~~~i~~i~~l~~~ar~~g~~---vi~~~~~~~~~~~~~~~~~~~~~~~~~~g 88 (201)
....++++++|||||||||+|++. .+.+++++++|+++||+.|+| |||+++.++. . |
T Consensus 12 ~~~~~~~~~tALlvID~Q~~f~~~~~~~~~vi~~i~~Ll~~ar~~g~p~~~Vi~t~~~~~~---~--------------G 74 (204)
T 1yzv_A 12 LLKHYGSCKTAFFCCDIQEKFMGRIANSANCVFVANRFAGLHTALGTAHSVYIVTEQYPKG---L--------------G 74 (204)
T ss_dssp SCCCTTTSEEEEEEECCBHHHHTTSTTHHHHHHHHHHHHHHHHHHCTTTEEEEEEEESHHH---H--------------C
T ss_pred ccccCCCCCeEEEEEcCHhHhhhccCCHHHHHHHHHHHHHHHHHcCCCcceEEEEEecCCc---C--------------C
Confidence 445678889999999999999864 567999999999999999999 9999765321 0 2
Q ss_pred CCCccccccccCCCCCCCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCC
Q 028963 89 TADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATAT 168 (201)
Q Consensus 89 ~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~ 168 (201)
.++|+|.+ .+++.+|.|++||+|++ +|.++|+++|+++|+|+|++|++||++||++|+++||+|+|++|||++
T Consensus 75 ----~~~~eL~~--~~~d~vi~K~~~SaF~~-~L~~~L~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~Da~as 147 (204)
T 1yzv_A 75 ----ATSADIRL--PPDAHVFSKKRFAMLVP-QVMPLVDLPEVEQVVLWGFETHVCILQTAAALLDMKKKVVIAVDGCGS 147 (204)
T ss_dssp ----SBCTTSCC--CTTCEEEEESSSSSCCT-TTHHHHSSTTEEEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEEC
T ss_pred ----CChHHhcC--CCCCEEEECCcCCCchh-HHHHHHHhCCCCEEEEEEeccCHHHHHHHHHHHHCCCEEEEECCccCC
Confidence 26888988 78899999999999999 999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHh---hcceEEeeHHHHHHhhcC
Q 028963 169 SDLELHEATLKNLA---YGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 169 ~~~~~h~~al~~l~---~~~~~v~~~~e~~~~l~~ 200 (201)
.+++.|+.+|+.|. ..|+.++++++++.+|.+
T Consensus 148 ~~~~~h~~aL~~m~~~~~~g~~v~t~e~vl~~ll~ 182 (204)
T 1yzv_A 148 QSQGDHCTAIQLMQSWSGDGCYISTSESILMQLLK 182 (204)
T ss_dssp SSHHHHHHHHHHHHTTGGGTEEEECHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhcCCeEEeCHHHHHHHHHH
Confidence 99999999999999 889999999999877743
No 27
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=100.00 E-value=7.3e-39 Score=249.48 Aligned_cols=159 Identities=20% Similarity=0.243 Sum_probs=142.3
Q ss_pred hccCCCCCCeEEEEEeccCccCCC---chhHHHHHHHHHHHHHHCC--CcEEEEecccCCCCCccccccccCCCccccCC
Q 028963 15 RKRNPNPKSSVLLVIDMQNHFSSI---AKPILDNTLATVQLCRRAS--IPVFFTRHCHKSPADYGMLGEWWNGDLVYDGT 89 (201)
Q Consensus 15 ~~~~~~~~~~aLlviD~Q~~f~~~---~~~~i~~i~~l~~~ar~~g--~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 89 (201)
....++++++|||||||||+|++. .+.+++++++++++||..| +||||+++.+.. . |
T Consensus 12 ~~~~~~~~~tALlvID~Q~~f~~~~~~~~~vi~~i~~ll~~ar~~g~~~pVi~t~~~~~~---~--------------G- 73 (200)
T 1x9g_A 12 LMPHYSKGKTAFLCVDLQEAFSKRIENFANCVFVANRLARLHEVVPENTKYIVTEHYPKG---L--------------G- 73 (200)
T ss_dssp SCCCTTSSCEEEEEECCBTTTTTTSTTHHHHHHHHHHHHHHHHHSTTSEEEEEEEESCSS---S--------------C-
T ss_pred hhhccCCCCEEEEEECChHHHhhccCCHHHHHHHHHHHHHHHHHhCCCceEEEEeecCCc---c--------------C-
Confidence 445678889999999999999963 4679999999999999999 999999875321 0 1
Q ss_pred CCccccccccCCCCCC-CEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCC
Q 028963 90 ADAELLPEIKGLVAGA-DEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATAT 168 (201)
Q Consensus 90 ~g~~~~~~l~~~~~~~-~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~ 168 (201)
+++|+|. .++ +.+|.|++||+|++ +|.++|+ |+++|+|+|++|++||++||++|+++||+|+|++|||++
T Consensus 74 ---~~~~eL~---~~~~~~vi~K~~~SaF~~-~L~~~L~--gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~Vv~Da~as 144 (200)
T 1x9g_A 74 ---RIVPEIT---LPKTAHLIEKTRFSCVVP-QVEELLE--DVDNAVVFGIEGHACILQTVADLLDMNKRVFLPKDGLGS 144 (200)
T ss_dssp ---CBCTTSC---CCTTCEEEEESSSSSCCH-HHHHTTT--TCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEGGGEEC
T ss_pred ---ccCHHHh---CCCCCeEEeCCCCCCchh-hHHHHhC--CCCEEEEEEEecCcHHHHHHHHHHhCCCEEEEeCCCcCC
Confidence 4567776 245 89999999999999 9999999 999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHh--hcceEEeeHHHHHHhhcC
Q 028963 169 SDLELHEATLKNLA--YGFAYLFDCERLEAGLFG 200 (201)
Q Consensus 169 ~~~~~h~~al~~l~--~~~~~v~~~~e~~~~l~~ 200 (201)
.+++.|+.+++.|+ ..|+.|+++++++.+|.+
T Consensus 145 ~~~~~h~~aL~~m~~~~~g~~v~tte~vl~~l~~ 178 (200)
T 1x9g_A 145 QKKTDFKAAIKLMSSWGPNCEITTSESILLQMTK 178 (200)
T ss_dssp SSHHHHHHHHHHHHTSCSSEEEECHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHhhCCCeEEecHHHHHHHHHH
Confidence 99999999999999 999999999999988754
No 28
>3h7i_A Ribonuclease H, RNAse H; BPT4 RNAse H, 5'-3' exonuclease, hydrolase, endonuclease; 1.50A {Enterobacteria phage T4} PDB: 2ihn_A 3h8w_A 3h8j_A 1tfr_A 3h8s_A
Probab=79.64 E-value=1.4 Score=35.65 Aligned_cols=43 Identities=9% Similarity=0.000 Sum_probs=39.7
Q ss_pred chHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEec
Q 028963 121 RLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFST 163 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~ 163 (201)
-+.+.|++.|+..+.+-|+.+|-++.+-|..+...|++|++++
T Consensus 111 ~ike~l~a~gi~~l~~~G~EADDiIgTLA~~a~~~g~~V~IvS 153 (305)
T 3h7i_A 111 VIDELKAYMPYIVMDIDKYEANDHIAVLVKKFSLEGHKILIIS 153 (305)
T ss_dssp HHHHHHHHSSSEEECCTTCCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHCCCCEEccCCccHHHHHHHHHHHHHHCCCcEEEEe
Confidence 4678899999999999999999999999999999999999876
No 29
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=74.51 E-value=6.4 Score=31.87 Aligned_cols=67 Identities=9% Similarity=-0.106 Sum_probs=45.2
Q ss_pred HHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCC-CC--H--HHHHHHHHHHhhcceEEee
Q 028963 124 ERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATAT-SD--L--ELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 124 ~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~-~~--~--~~h~~al~~l~~~~~~v~~ 190 (201)
..+.+.|.++||-+|.++..--.++|..+..+|++++++.....+ .. + ..+..-+..++..|++|+-
T Consensus 60 ~~a~~~g~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~ 131 (341)
T 1f2d_A 60 PDIVEGDYTHLVSIGGRQSNQTRMVAALAAKLGKKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRV 131 (341)
T ss_dssp HHHHHSCCSEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCceEEEeccCCCccccccccccccccHHHHHhCCCEEEE
Confidence 344467889999888888888888899999999998887655544 11 0 1112344555667777763
No 30
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=70.95 E-value=16 Score=29.22 Aligned_cols=59 Identities=12% Similarity=-0.050 Sum_probs=41.1
Q ss_pred HhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 127 VGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 127 ~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+++|.++||-+|-++..--.+.|..+..+|++++++..... .. ..-+..++..|++|+-
T Consensus 66 ~~~G~~~vv~~G~ssGN~g~alA~~a~~~G~~~~iv~p~~~-~~----~~k~~~~~~~GA~v~~ 124 (325)
T 1j0a_A 66 LSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAILVLRGKE-EL----KGNYLLDKIMGIETRV 124 (325)
T ss_dssp HHTTCSEEEEECCTTCHHHHHHHHHHHHTTCEEEEEEESCC-CS----CHHHHHHHHTTCEEEE
T ss_pred HHcCCCEEEEcCCcchHHHHHHHHHHHHhCCcEEEEECCCC-CC----CchHHHHHHCCCEEEE
Confidence 45788999988877777778888999999999887765444 11 2224455566777663
No 31
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=66.87 E-value=27 Score=28.14 Aligned_cols=65 Identities=14% Similarity=0.095 Sum_probs=42.8
Q ss_pred HhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCC-HHH-HHHHHHHHhhcceEEeeH
Q 028963 127 VGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSD-LEL-HEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 127 ~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~-~~~-h~~al~~l~~~~~~v~~~ 191 (201)
+++|.++||-+|-.+..=-.+.|..+..+|++++++-....+.. +.. ...-+..++..|++|+-.
T Consensus 77 ~~~G~~~vv~~s~tsGN~g~alA~aa~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~ 143 (342)
T 4d9b_A 77 LREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENPIGTTAENYLTNGNRLLLDLFNTQIEMC 143 (342)
T ss_dssp HHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECTTCCCCHHHHHSHHHHHHHHTTCEEEEC
T ss_pred HHcCCCEEEEcCCcccHHHHHHHHHHHHhCCcEEEEEeCCCCCccccccccchHHHHHHCCCEEEEE
Confidence 46899999988864444556777779999999887766554432 221 123455666677777643
No 32
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=65.79 E-value=13 Score=29.89 Aligned_cols=65 Identities=9% Similarity=-0.016 Sum_probs=41.7
Q ss_pred HHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCC--HHHHHHHHHHHhhcceEEee
Q 028963 126 LVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSD--LELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 126 L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~--~~~h~~al~~l~~~~~~v~~ 190 (201)
+.+.|.++|+-+|.++..--.++|..+..+|++++++.....+.. +.....-+..++..|++|+-
T Consensus 62 a~~~g~~~vv~~GassGN~g~alA~~a~~~G~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~ 128 (338)
T 1tzj_A 62 ALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRL 128 (338)
T ss_dssp HHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEE
T ss_pred HHHcCCCEEEEcCCchhHHHHHHHHHHHHhCCceEEEecCCCCccccccccCccHHHHHhCCCEEEE
Confidence 346788888888877777777778888999999887665444332 11111234455556777663
No 33
>1exn_A 5'-exonuclease, 5'-nuclease; hydrolase; 2.50A {Enterobacteria phage T5} SCOP: a.60.7.1 c.120.1.2 PDB: 1ut5_A 1ut8_A 1xo1_A
Probab=58.49 E-value=7.1 Score=31.24 Aligned_cols=43 Identities=9% Similarity=-0.052 Sum_probs=39.2
Q ss_pred chHHHHHh--CCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEec
Q 028963 121 RLQERLVG--MGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFST 163 (201)
Q Consensus 121 ~L~~~L~~--~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~ 163 (201)
.+.++|+. .||..+..-|+..|-++.+-|..+...|++|++++
T Consensus 106 ~ikell~~~~~gip~i~~~g~EADDviatLa~~~~~~G~~v~IvS 150 (290)
T 1exn_A 106 YLKDAFELCKTTFPTFTIRGVEADDMAAYIVKLIGHLYDHVWLIS 150 (290)
T ss_dssp HHHHHHHHHTTTSCEECCTTBCHHHHHHHHHHHHGGGSSCEEEEC
T ss_pred HHHHHHHhhCCCCcEEEECCcCHHHHHHHHHHHHHHCCCcEEEEe
Confidence 47788888 99999999999999999999999999999998875
No 34
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=57.98 E-value=16 Score=27.73 Aligned_cols=41 Identities=12% Similarity=0.222 Sum_probs=34.2
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.-+|++|+---.+.. ..+++...+.++.++++|++++++.-
T Consensus 6 ~kli~~DlDGTLl~~-~~~~~~~~~ai~~l~~~Gi~v~laTg 46 (266)
T 3pdw_A 6 YKGYLIDLDGTMYNG-TEKIEEACEFVRTLKDRGVPYLFVTN 46 (266)
T ss_dssp CSEEEEECSSSTTCH-HHHHHHHHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEeCcCceEeC-CEeCccHHHHHHHHHHCCCeEEEEeC
Confidence 348999999888764 66778889999999999999998853
No 35
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=57.74 E-value=39 Score=25.63 Aligned_cols=30 Identities=23% Similarity=0.196 Sum_probs=15.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... .-=.+.|+.+.++|++|+++
T Consensus 30 k~vlITGas~-gIG~~la~~l~~~G~~V~~~ 59 (262)
T 3rkr_A 30 QVAVVTGASR-GIGAAIARKLGSLGARVVLT 59 (262)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 4566666543 33345555555666665544
No 36
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=57.74 E-value=17 Score=24.70 Aligned_cols=46 Identities=7% Similarity=-0.043 Sum_probs=34.0
Q ss_pred CchHHHHHhCCCcEEEEeeccCch-hHHHHHHHHHhCCCeEEEecCC
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNL-CCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~-CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
.+|.+++++.+++.++|+--..+. -...-+..+.+.|+++.++.|.
T Consensus 55 ~~l~~~~~~~~id~viia~~~~~~~~~~~i~~~l~~~gv~v~~vP~~ 101 (141)
T 3nkl_A 55 KYLERLIKKHCISTVLLAVPSASQVQKKVIIESLAKLHVEVLTIPNL 101 (141)
T ss_dssp GGHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHTTTCEEEECCCH
T ss_pred HHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHHHHcCCeEEECCCH
Confidence 478899999999999987443333 3344455577889999999874
No 37
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=52.97 E-value=33 Score=27.32 Aligned_cols=63 Identities=17% Similarity=0.038 Sum_probs=44.1
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCC-CHHHHHHHHHHHhhcceE-EeeHHHHHHhhc
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATS-DLELHEATLKNLAYGFAY-LFDCERLEAGLF 199 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~-~~~~h~~al~~l~~~~~~-v~~~~e~~~~l~ 199 (201)
+-++|+=......-+.||..|.+.|-+|+++.-...+. +...|+ .+++ |+. |.+.+|++++|+
T Consensus 217 ~~~vVvEA~~~SGsliTA~~Ale~gR~VfavPG~i~~~~s~G~n~----LI~~-GA~lv~~~~Dil~el~ 281 (288)
T 3uqz_A 217 RGVIVAEAKMRSGSLITCERAMEEGRDVFAIPGSILDGLSDGCHH----LIQE-GAKLVTSGQDVLAEFE 281 (288)
T ss_dssp SEEEEESCCTTCHHHHHHHHHHHTTCEEEECCCCSSSSTTHHHHH----HHHT-TCEECSSHHHHHHHCC
T ss_pred CeEEEEecCCCChHHHHHHHHHHcCCeEEEECCCCCCccchHHHH----HHHC-CCEEECCHHHHHHHhC
Confidence 45666666667788899999999999999887555443 333332 3333 565 556889999885
No 38
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=52.01 E-value=39 Score=26.14 Aligned_cols=48 Identities=19% Similarity=0.178 Sum_probs=24.8
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhc
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYG 184 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~ 184 (201)
-+.++|+|-...+. .++|+...+.|++|++. +.+++..+...+.+...
T Consensus 9 gKvalVTGas~GIG-~aia~~la~~Ga~Vvi~-----~~~~~~~~~~~~~l~~~ 56 (255)
T 4g81_D 9 GKTALVTGSARGLG-FAYAEGLAAAGARVILN-----DIRATLLAESVDTLTRK 56 (255)
T ss_dssp TCEEEETTCSSHHH-HHHHHHHHHTTCEEEEC-----CSCHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHH-HHHHHHHHHCCCEEEEE-----ECCHHHHHHHHHHHHhc
Confidence 35566666554333 45666666666666543 23444444444444433
No 39
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=51.40 E-value=43 Score=27.44 Aligned_cols=97 Identities=15% Similarity=0.053 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCccccccccCCCCCCCEEEECCCCCCCCCCch
Q 028963 43 LDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRL 122 (201)
Q Consensus 43 i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L 122 (201)
.+....|.+.+++.|++++-+...... .++..++.. . +.|-.-.-..+-.|
T Consensus 77 ~e~~~~L~~~~~~~Gi~~~st~fD~~s----------------------vd~l~~~~v------~-~~KI~S~~~~N~pL 127 (350)
T 3g8r_A 77 PEQMQKLVAEMKANGFKAICTPFDEES----------------------VDLIEAHGI------E-IIKIASCSFTDWPL 127 (350)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHHH----------------------HHHHHHTTC------C-EEEECSSSTTCHHH
T ss_pred HHHHHHHHHHHHHcCCcEEeccCCHHH----------------------HHHHHHcCC------C-EEEECcccccCHHH
Confidence 456778899999999998888654321 011111100 0 11111111234455
Q ss_pred HHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCC
Q 028963 123 QERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATS 169 (201)
Q Consensus 123 ~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~ 169 (201)
.+.+.+.|..-|+=.|++|--=++..+.-....|-+++++. |++++
T Consensus 128 L~~va~~gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlh-C~s~Y 173 (350)
T 3g8r_A 128 LERIARSDKPVVASTAGARREDIDKVVSFMLHRGKDLTIMH-CVAEY 173 (350)
T ss_dssp HHHHHTSCSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEE-CCCCS
T ss_pred HHHHHhhCCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEe-cCCCC
Confidence 66666666666666676666666666655555565555543 55554
No 40
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=51.06 E-value=43 Score=26.60 Aligned_cols=47 Identities=19% Similarity=0.192 Sum_probs=30.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHH
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLK 179 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~ 179 (201)
++++|+|.+.-+. .++++.+.++|++|++...-..+.+.+..+....
T Consensus 6 k~vlVTGas~GIG-~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~ 52 (324)
T 3u9l_A 6 KIILITGASSGFG-RLTAEALAGAGHRVYASMRDIVGRNASNVEAIAG 52 (324)
T ss_dssp CEEEESSCSSHHH-HHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHH
T ss_pred CEEEEECCCcHHH-HHHHHHHHHCCCEEEEecCcccccCHHHHHHHHH
Confidence 5788888765443 6788888899999887654444445444443333
No 41
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=50.36 E-value=62 Score=25.11 Aligned_cols=31 Identities=10% Similarity=0.059 Sum_probs=18.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEec
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFST 163 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~ 163 (201)
+.++|+|.... -=.+.|+...+.|++|+++.
T Consensus 29 k~~lVTGas~G-IG~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 29 KVAFITGAARG-QGRSHAITLAREGADIIAID 59 (299)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEe
Confidence 46667776543 33456666667777766653
No 42
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=50.19 E-value=14 Score=28.21 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=33.4
Q ss_pred EEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 25 VLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 25 aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
-+|++||---.......+ +...+.++++++.|++++++..
T Consensus 6 kli~~DlDGTLl~~~~~i-~~~~eal~~l~~~G~~vvl~Tn 45 (264)
T 3epr_A 6 KGYLIDLDGTIYKGKSRI-PAGERFIERLQEKGIPYMLVTN 45 (264)
T ss_dssp CEEEECCBTTTEETTEEC-HHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEeCCCceEeCCEEC-cCHHHHHHHHHHCCCeEEEEeC
Confidence 489999998877765556 7888999999999999998863
No 43
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=49.98 E-value=47 Score=21.69 Aligned_cols=110 Identities=9% Similarity=0.095 Sum_probs=61.9
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCccccccc--cCCCC
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELLPEI--KGLVA 103 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~l--~~~~~ 103 (201)
+|+.|+-.-+.. .....+.+..+++..++.|.+++.+....... .. .+...+ ..
T Consensus 4 ~i~~D~DgtL~~-~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~-----~~---------------~~l~~~~l~~--- 59 (137)
T 2pr7_A 4 GLIVDYAGVLDG-TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGL-----GA---------------APIRELETNG--- 59 (137)
T ss_dssp EEEECSTTTTSS-CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGG-----GG---------------HHHHHHHHTT---
T ss_pred EEEEeccceecC-CCccCccHHHHHHHHHHCCCEEEEEeCCCHHH-----HH---------------HHHHHCChHh---
Confidence 578899887733 45577889999999999999987775432210 00 000111 11
Q ss_pred CCCEEEECCCCCCC--CCCchHHHHHhCCCc--EEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 104 GADEVIEKNTYSAF--GNTRLQERLVGMGVE--EVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 104 ~~~~vv~K~~~saf--~~t~L~~~L~~~gi~--~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
.-+.++.-.....- ...-+...+++.|++ +++++|-... -+..|...|+..+.+..
T Consensus 60 ~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~-----di~~a~~~G~~~i~~~~ 119 (137)
T 2pr7_A 60 VVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSIL-----NVRGAVEAGLVGVYYQQ 119 (137)
T ss_dssp SSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHH-----HHHHHHHHTCEEEECSC
T ss_pred hccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHH-----HHHHHHHCCCEEEEeCC
Confidence 01222211000000 012355677777775 7888886543 25667778998777654
No 44
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=49.90 E-value=14 Score=27.80 Aligned_cols=69 Identities=20% Similarity=0.225 Sum_probs=45.4
Q ss_pred HHHHhCCCcEEEEeeccCchhHHHHHHHHHh--CCCeEEEecCCCCCCCH---HHHHHHHHHHhhcceEEeeHHHHHHh
Q 028963 124 ERLVGMGVEEVIVCGVMTNLCCETTARDAFV--RGFRVFFSTDATATSDL---ELHEATLKNLAYGFAYLFDCERLEAG 197 (201)
Q Consensus 124 ~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~--~G~~v~vv~Da~~~~~~---~~h~~al~~l~~~~~~v~~~~e~~~~ 197 (201)
+..++.||++|||+-..-. ||+-+.+ .|.++++|+=-.+-..+ +.-+...+.|+..|..|++..-+++.
T Consensus 37 era~e~~Ik~iVVAS~sG~-----TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~lsg 110 (201)
T 1vp8_A 37 ERAKELGIKHLVVASSYGD-----TAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIVRQSHILSG 110 (201)
T ss_dssp HHHHHHTCCEEEEECSSSH-----HHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEEECCCTTTT
T ss_pred HHHHHcCCCEEEEEeCCCh-----HHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEEeccccc
Confidence 4556789999999865433 4443333 57899999876654432 22355666777888888887665543
No 45
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=48.63 E-value=69 Score=23.89 Aligned_cols=28 Identities=21% Similarity=0.024 Sum_probs=11.7
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
+++|+|.. ..-=.+.|+.+.++|++|++
T Consensus 11 ~vlITGas-~giG~~~a~~l~~~G~~V~~ 38 (253)
T 3qiv_A 11 VGIVTGSG-GGIGQAYAEALAREGAAVVV 38 (253)
T ss_dssp EEEEETTT-SHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCC-ChHHHHHHHHHHHCCCEEEE
Confidence 44444432 22233444444444444443
No 46
>3nk6_A 23S rRNA methyltransferase; nosiheptide, nosiheptide-resistance methyltransferase, 23S R methyltransferase; 2.00A {Streptomyces actuosus} PDB: 3nk7_A* 3gyq_A*
Probab=48.41 E-value=72 Score=25.01 Aligned_cols=76 Identities=20% Similarity=0.078 Sum_probs=52.1
Q ss_pred chHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecC-C-CCCCCHHHHHHHHHHHhhc-ceEEeeHHHHHHh
Q 028963 121 RLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD-A-TATSDLELHEATLKNLAYG-FAYLFDCERLEAG 197 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D-a-~~~~~~~~h~~al~~l~~~-~~~v~~~~e~~~~ 197 (201)
+|.+++...+- .|++.|+....=+.+-+|.|...|++-+++.. . +...++...+.++-.+... ...+ +..++++.
T Consensus 110 ~l~~~~~~~~~-~lvLd~v~dP~NlGaI~Rta~a~G~~~vil~~~~~~~~~~~~v~ras~Ga~~~l~i~~~-~l~~~l~~ 187 (277)
T 3nk6_A 110 RLADIAERGGD-VVVLDGVKIVGNIGAIVRTSLALGAAGIVLVDSDLATIADRRLLRASRGYVFSLPVVLA-DREEAVSF 187 (277)
T ss_dssp CHHHHHHHCSC-EEEEESCCCHHHHHHHHHHHHHTTCSEEEEESCCCSCTTCHHHHHHTTTCTTTSCEEEC-CHHHHHHH
T ss_pred CHHHHhccCCC-EEEEEcCCCcchHHHHHHHHHHcCCCEEEEcCCCCcCCCCHHHHHHhCChhhcCeEEEE-CHHHHHHH
Confidence 57777765444 99999999999999999999999988555554 4 4556776666554433322 2233 66666665
Q ss_pred h
Q 028963 198 L 198 (201)
Q Consensus 198 l 198 (201)
|
T Consensus 188 l 188 (277)
T 3nk6_A 188 L 188 (277)
T ss_dssp H
T ss_pred H
Confidence 5
No 47
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=48.31 E-value=48 Score=25.08 Aligned_cols=12 Identities=17% Similarity=0.163 Sum_probs=5.5
Q ss_pred CchHHHHHhCCC
Q 028963 120 TRLQERLVGMGV 131 (201)
Q Consensus 120 t~L~~~L~~~gi 131 (201)
..+...|.++|.
T Consensus 37 ~~~a~~l~~~G~ 48 (266)
T 3o38_A 37 STTARRALLEGA 48 (266)
T ss_dssp HHHHHHHHHTTC
T ss_pred HHHHHHHHHCCC
Confidence 344444444443
No 48
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=47.23 E-value=31 Score=23.73 Aligned_cols=75 Identities=9% Similarity=0.032 Sum_probs=51.5
Q ss_pred chHHHHHhCCCc----EEEEeeccCchhHHHHHHHHH-hCCCeE-EEec---CCCCC--CCHHHHHHHHHHHhhcceEEe
Q 028963 121 RLQERLVGMGVE----EVIVCGVMTNLCCETTARDAF-VRGFRV-FFST---DATAT--SDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 121 ~L~~~L~~~gi~----~lvi~G~~T~~CV~~Ta~~a~-~~G~~v-~vv~---Da~~~--~~~~~h~~al~~l~~~~~~v~ 189 (201)
.+.+.|++.|.. .++.+|+...-.+.+.+..++ +.|.++ .+.. +...+ ...+..+.+.+.|...|-++.
T Consensus 57 ~a~~~L~~~G~~v~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~~d~~~A~~~L~~~g~~v~ 136 (144)
T 2f06_A 57 KAYKALKDNHFAVNITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRPSNMDKCIEVLKEKKVDLL 136 (144)
T ss_dssp HHHHHHHHTTCCEEEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEESCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCeEeeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEeCCHHHHHHHHHHcCCEEe
Confidence 445666666654 366678889899999988765 678888 3332 22111 134467888888888889999
Q ss_pred eHHHHH
Q 028963 190 DCERLE 195 (201)
Q Consensus 190 ~~~e~~ 195 (201)
+.+|+.
T Consensus 137 ~~~~~~ 142 (144)
T 2f06_A 137 AASDLY 142 (144)
T ss_dssp CHHHHT
T ss_pred cHHHHh
Confidence 988874
No 49
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=46.61 E-value=79 Score=24.16 Aligned_cols=53 Identities=13% Similarity=-0.041 Sum_probs=33.9
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC-----------CCCCCHHHHHHHHHHHhhc
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA-----------TATSDLELHEATLKNLAYG 184 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da-----------~~~~~~~~h~~al~~l~~~ 184 (201)
-+.++|+|.... -=.+.|+...++|++|+++.-. ....+.+..+...+.+...
T Consensus 11 ~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (286)
T 3uve_A 11 GKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH 74 (286)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc
Confidence 468889998754 3467888888999998876322 2334455555555555433
No 50
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=46.49 E-value=53 Score=26.37 Aligned_cols=43 Identities=23% Similarity=0.215 Sum_probs=36.1
Q ss_pred CchHHHHHhCCCcEEEEe-------eccCchhHHHHHHHHHhCCCeEEEe
Q 028963 120 TRLQERLVGMGVEEVIVC-------GVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~-------G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
.++.++|++.|+..|-|- |....--++..++.|.++|.+|++-
T Consensus 30 ~d~~~ilk~~G~N~VRi~~w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld 79 (332)
T 1hjs_A 30 QPLENILAANGVNTVRQRVWVNPADGNYNLDYNIAIAKRAKAAGLGVYID 79 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEECSSCTTCTTSHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccHHHHHHHCCCCEEEEeeeeCCCCCcCCHHHHHHHHHHHHHCCCEEEEE
Confidence 378899999999999984 6656666778889999999999985
No 51
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=45.19 E-value=62 Score=24.75 Aligned_cols=30 Identities=20% Similarity=0.356 Sum_probs=14.1
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.... -=.+.|+.+.+.|++|+++
T Consensus 5 k~~lVTGas~G-IG~aia~~la~~G~~V~~~ 34 (264)
T 3tfo_A 5 KVILITGASGG-IGEGIARELGVAGAKILLG 34 (264)
T ss_dssp CEEEESSTTSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCccH-HHHHHHHHHHHCCCEEEEE
Confidence 34555554432 2234455555555555443
No 52
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=44.88 E-value=35 Score=27.92 Aligned_cols=97 Identities=10% Similarity=0.022 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCccccccccCCCCCCCEEEECCCCCCCCCCch
Q 028963 43 LDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRL 122 (201)
Q Consensus 43 i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L 122 (201)
.+....|.+.+++.|++++-+...... .++..++.. + +.|-.-.-..+.+|
T Consensus 90 ~e~~~~L~~~~~~~Gi~~~st~~d~~s----------------------vd~l~~~~v----~---~~KI~S~~~~n~~L 140 (349)
T 2wqp_A 90 EEDEIKLKEYVESKGMIFISTLFSRAA----------------------ALRLQRMDI----P---AYKIGSGECNNYPL 140 (349)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSHHH----------------------HHHHHHHTC----S---CEEECGGGTTCHHH
T ss_pred HHHHHHHHHHHHHhCCeEEEeeCCHHH----------------------HHHHHhcCC----C---EEEECcccccCHHH
Confidence 566788889999999998888654321 011111110 0 11111111234456
Q ss_pred HHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCC
Q 028963 123 QERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATS 169 (201)
Q Consensus 123 ~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~ 169 (201)
.+.+.+.|..-|+=.|++|--=+...+.-....|-++++.. |++++
T Consensus 141 L~~va~~gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlh-c~s~Y 186 (349)
T 2wqp_A 141 IKLVASFGKPIILSTGMNSIESIKKSVEIIREAGVPYALLH-CTNIY 186 (349)
T ss_dssp HHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEE-CCCCS
T ss_pred HHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEe-ccCCC
Confidence 66666666666666777766666666665555555666665 66665
No 53
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=44.43 E-value=57 Score=25.05 Aligned_cols=33 Identities=15% Similarity=0.080 Sum_probs=21.5
Q ss_pred CCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 129 MGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 129 ~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
..-++++|+|... .-=.++|+.+.++|++|+++
T Consensus 31 l~gk~~lVTGas~-GIG~aia~~la~~G~~V~~~ 63 (275)
T 4imr_A 31 LRGRTALVTGSSR-GIGAAIAEGLAGAGAHVILH 63 (275)
T ss_dssp CTTCEEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3446777777654 33456777777778777665
No 54
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=44.19 E-value=1.1e+02 Score=25.30 Aligned_cols=134 Identities=15% Similarity=0.147 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHHCCCcEEEEecccCCCCCccc-cccc--cCCCccccCCCCccccccccCCCCCCCEEEECCCCCCCC-
Q 028963 43 LDNTLATVQLCRRASIPVFFTRHCHKSPADYGM-LGEW--WNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFG- 118 (201)
Q Consensus 43 i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~-~~~~--~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~- 118 (201)
...+.+.++++++.|+.+|...+.. |+. +... -|.-.+..|... +..++.. +.--+|--...|.+.
T Consensus 74 ~~~~~~~l~~~~~~g~~~it~~D~~-----YP~~L~~i~dpP~~Lf~~G~~~--ll~~~~~---~~vAIVGsR~~s~yG~ 143 (382)
T 3maj_A 74 EDEARREIEAGRRIGVELVAPGETG-----YPTRLATIDDAPPLLGVHALPE--ALAVMAR---PMIAIVGSRNASGAGL 143 (382)
T ss_dssp HHHHHHHHHHHHTTTEEEECTTSTT-----SCHHHHTSTTCCSSEEEECCTT--CGGGGGS---CEEEEECCSSCCHHHH
T ss_pred HHHHHHHHHHHHhCCCEEECCCchh-----ccHHHHhccCCCceeEEeCChh--hhhhccC---ceEEEEeCCCCCHHHH
Confidence 4556777788888887666554332 221 1111 122234445421 1111101 111222222333221
Q ss_pred --CCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 119 --NTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 119 --~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
...|...|.+.|+ +||+|.+.-+ -...-+.|.+.| .|-|+.....-.-+..|..-.+.+....+-++|
T Consensus 144 ~~a~~l~~~La~~g~--~VVSGlA~GI-D~~AH~~AL~~g-TIaVLg~Gld~~YP~~n~~L~~~I~~~~G~liS 213 (382)
T 3maj_A 144 KFAGQLAADLGAAGF--VVISGLARGI-DQAAHRASLSSG-TVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAIS 213 (382)
T ss_dssp HHHHHHHHHHHHHTC--EEEECCCTTH-HHHHHHHHTTTC-EEEECSSCTTSCSSGGGHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHCCc--EEEeCCccCH-HHHHHHHHHhCC-eEEEECCCcCccCCHhhHHHHHHHHHhCCcEEe
Confidence 2356667777775 6999997643 334445677888 777777666555555666666666442334554
No 55
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=44.02 E-value=74 Score=24.07 Aligned_cols=29 Identities=28% Similarity=0.356 Sum_probs=12.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
++++|+|....+ =.+.++.+.++|++|++
T Consensus 12 k~vlVTGas~gI-G~aia~~l~~~G~~V~~ 40 (264)
T 3ucx_A 12 KVVVISGVGPAL-GTTLARRCAEQGADLVL 40 (264)
T ss_dssp CEEEEESCCTTH-HHHHHHHHHHTTCEEEE
T ss_pred cEEEEECCCcHH-HHHHHHHHHHCcCEEEE
Confidence 344455543322 23444444455555444
No 56
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=43.89 E-value=59 Score=25.31 Aligned_cols=25 Identities=8% Similarity=0.050 Sum_probs=12.8
Q ss_pred CCCCCCchHHHHHhCCCcEEEEeecc
Q 028963 115 SAFGNTRLQERLVGMGVEEVIVCGVM 140 (201)
Q Consensus 115 saf~~t~L~~~L~~~gi~~lvi~G~~ 140 (201)
+.+-+..+...|.+.|. +|++++-.
T Consensus 40 s~gIG~~la~~l~~~G~-~V~~~~r~ 64 (301)
T 3tjr_A 40 ASGIGLATATEFARRGA-RLVLSDVD 64 (301)
T ss_dssp TSHHHHHHHHHHHHTTC-EEEEEESC
T ss_pred CCHHHHHHHHHHHHCCC-EEEEEECC
Confidence 33334556666666664 35555443
No 57
>2f9i_B Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=43.88 E-value=41 Score=26.66 Aligned_cols=41 Identities=15% Similarity=0.267 Sum_probs=31.0
Q ss_pred EEEeccCccCC--CchhHHHHHHHHHHHHHHCCCcEEEEeccc
Q 028963 27 LVIDMQNHFSS--IAKPILDNTLATVQLCRRASIPVFFTRHCH 67 (201)
Q Consensus 27 lviD~Q~~f~~--~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~ 67 (201)
.|+=+|..|.. .....-+++.++++.|.+.++|+|+..+..
T Consensus 124 ~v~a~d~~~~gGs~g~~~~~K~~r~ie~A~~~~lPlI~l~dsg 166 (285)
T 2f9i_B 124 GVAVMDSRFRMGSMGSVIGEKICRIIDYCTENRLPFILFSASG 166 (285)
T ss_dssp EEEEECTTTGGGCCCHHHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred EEEEEccccccCcCCHHHHHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34444445543 356788999999999999999999998753
No 58
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=43.63 E-value=39 Score=26.78 Aligned_cols=43 Identities=12% Similarity=0.182 Sum_probs=31.3
Q ss_pred EEEEeccCccCCCc------hhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 26 LLVIDMQNHFSSIA------KPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 26 LlviD~Q~~f~~~~------~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
+||||.-..+.... ..+..-...|...|++.++|||.+.+.++
T Consensus 184 lVVID~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~lsql~r 232 (315)
T 3bh0_A 184 IVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQLSR 232 (315)
T ss_dssp EEEEECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEEEECCCG
T ss_pred EEEEeCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEeecCc
Confidence 99999888765321 22344455677788999999999988764
No 59
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=42.73 E-value=29 Score=27.18 Aligned_cols=35 Identities=23% Similarity=0.375 Sum_probs=27.6
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCC
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSP 70 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~ 70 (201)
.+|+|+|...+. ..+..|+..|+|||...+.+-+|
T Consensus 160 dll~V~Dp~~e~------------~Ai~EA~~l~IPvIaivDTn~dp 194 (256)
T 2vqe_B 160 DAIFVVDPTKEA------------IAVREARKLFIPVIALADTDSDP 194 (256)
T ss_dssp SEEEESCTTTTH------------HHHHHHHHTTCCCEECCCTTSCG
T ss_pred CEEEEeCCccch------------HHHHHHHHcCCCEEEEecCCCCc
Confidence 489999987652 45668889999999999876654
No 60
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=42.66 E-value=57 Score=25.14 Aligned_cols=48 Identities=15% Similarity=0.014 Sum_probs=25.4
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhc
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYG 184 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~ 184 (201)
-+.++|+|-..-+ =.++|+...+.|.+|++. +.+++..+...+.+...
T Consensus 7 gKvalVTGas~GI-G~aiA~~la~~Ga~Vv~~-----~~~~~~~~~~~~~i~~~ 54 (254)
T 4fn4_A 7 NKVVIVTGAGSGI-GRAIAKKFALNDSIVVAV-----ELLEDRLNQIVQELRGM 54 (254)
T ss_dssp TCEEEEETTTSHH-HHHHHHHHHHTTCEEEEE-----ESCHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCCHH-HHHHHHHHHHcCCEEEEE-----ECCHHHHHHHHHHHHhc
Confidence 3566666654433 355666666666666553 23444444455555443
No 61
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=41.69 E-value=81 Score=23.72 Aligned_cols=28 Identities=18% Similarity=0.137 Sum_probs=12.3
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
.++|+|.. ..-=.+.++.+.++|++|++
T Consensus 7 ~vlVTGas-~gIG~~ia~~l~~~G~~V~~ 34 (260)
T 2qq5_A 7 VCVVTGAS-RGIGRGIALQLCKAGATVYI 34 (260)
T ss_dssp EEEESSTT-SHHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCCC-chHHHHHHHHHHHCCCEEEE
Confidence 44455432 22233444444455555444
No 62
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=41.41 E-value=1.2e+02 Score=24.85 Aligned_cols=67 Identities=12% Similarity=0.033 Sum_probs=44.1
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCC--CHHHHHHHHHHHhhcceEEeeHHHHHHh
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATS--DLELHEATLKNLAYGFAYLFDCERLEAG 197 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~--~~~~h~~al~~l~~~~~~v~~~~e~~~~ 197 (201)
-.+|.++|-..+.-+.+-+..+...|.++.++.-..-.. +++..+.+-+.....|+.+.-+.++-++
T Consensus 180 glkva~vGD~~nnva~Sl~~~~~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g~~i~~~~d~~ea 248 (365)
T 4amu_A 180 NKKIVFIGDYKNNVGVSTMIGAAFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNGGSLRFSTDKILA 248 (365)
T ss_dssp TCEEEEESSTTSHHHHHHHHHHHHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHSCEEEEESCHHHH
T ss_pred CCEEEEECCCCcchHHHHHHHHHHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcCCEEEEECCHHHH
Confidence 458889998766666677777778899999987655444 5555555555555556555444444333
No 63
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=41.00 E-value=42 Score=24.00 Aligned_cols=40 Identities=10% Similarity=-0.022 Sum_probs=35.4
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|++....++.++++.+..+..|+.||.+..
T Consensus 48 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~ 87 (187)
T 3dwv_A 48 PLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPS 87 (187)
T ss_dssp CEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEB
T ss_pred EEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEEC
Confidence 5788899999999888999999999999998998888864
No 64
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=40.90 E-value=41 Score=25.38 Aligned_cols=35 Identities=23% Similarity=0.194 Sum_probs=27.2
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCC
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSP 70 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~ 70 (201)
.+|+|+|...+. ..+.+|+..|+|||...+.+.+|
T Consensus 117 dlliV~Dp~~e~------------~ai~EA~~l~IPvIalvDTn~~p 151 (208)
T 1vi6_A 117 EVVFVNDPAIDK------------QAVSEATAVGIPVVALCDSNNSS 151 (208)
T ss_dssp SEEEESCTTTTH------------HHHHHHHHTTCCEEEEECTTCCC
T ss_pred CEEEEECCCcch------------hHHHHHHHhCCCEEEEeCCCCCc
Confidence 388899987653 35667888999999999876654
No 65
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=40.68 E-value=52 Score=25.60 Aligned_cols=66 Identities=14% Similarity=0.152 Sum_probs=48.3
Q ss_pred HHHHhCCCcEEEEeeccCchhHHHH-----HHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 124 ERLVGMGVEEVIVCGVMTNLCCETT-----ARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 124 ~~L~~~gi~~lvi~G~~T~~CV~~T-----a~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+..++.|| .++..|-..++|+.+. ...+.+.||+++=++|.+-+.+.+.....++.....|-.|.+
T Consensus 62 ~l~~~~gV-~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 62 NYYKDWGI-KVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp HHHHTTTC-EEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCC-eEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 33445555 3556665666666654 445667899999999999999999988889988877666654
No 66
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=40.41 E-value=71 Score=24.16 Aligned_cols=30 Identities=23% Similarity=0.322 Sum_probs=19.9
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.... -=.+.++.+.++|++|+++
T Consensus 27 k~vlVTGas~g-IG~~la~~l~~~G~~v~i~ 56 (267)
T 4iiu_A 27 RSVLVTGASKG-IGRAIARQLAADGFNIGVH 56 (267)
T ss_dssp CEEEETTTTSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCh-HHHHHHHHHHHCCCEEEEE
Confidence 56777775543 3456677777778877654
No 67
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=40.32 E-value=89 Score=23.84 Aligned_cols=19 Identities=21% Similarity=0.454 Sum_probs=9.1
Q ss_pred CCchHHHHHhCCCcEEEEee
Q 028963 119 NTRLQERLVGMGVEEVIVCG 138 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G 138 (201)
+..+.+.|.+.|. +|++++
T Consensus 39 G~aia~~la~~G~-~V~~~~ 57 (271)
T 4ibo_A 39 GRAMAEGLAVAGA-RILING 57 (271)
T ss_dssp HHHHHHHHHHTTC-EEEECC
T ss_pred HHHHHHHHHHCCC-EEEEEe
Confidence 4445555555554 344444
No 68
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=39.84 E-value=41 Score=25.84 Aligned_cols=35 Identities=17% Similarity=0.495 Sum_probs=27.7
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCC
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSP 70 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~ 70 (201)
.+++|+|...+. ..+.+|+..|+|||...+.+-+|
T Consensus 159 dll~v~Dp~~e~------------~ai~EA~~l~IPvIaivDTn~dp 193 (231)
T 3bbn_B 159 DIVIIVDQQEEY------------TALRECITLGIPTICLIDTNCNP 193 (231)
T ss_dssp SEEEESCTTTTH------------HHHHHHHTTTCCEEECCCSSSCC
T ss_pred CEEEEeCCcccc------------HHHHHHHHhCCCEEEEecCCCCc
Confidence 489999987752 35668889999999999877655
No 69
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=39.71 E-value=1.3e+02 Score=24.19 Aligned_cols=62 Identities=11% Similarity=-0.079 Sum_probs=41.8
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCER 193 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e 193 (201)
-.+|.++|-- +..+.+-+..+...|+++.++.-..-..+++..+.+-+.....|+.+.-+.+
T Consensus 157 glkva~vGD~-~rva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~d 218 (323)
T 3gd5_A 157 GLKLAYVGDG-NNVAHSLLLGCAKVGMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILRD 218 (323)
T ss_dssp TCEEEEESCC-CHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEESC
T ss_pred CCEEEEECCC-CcHHHHHHHHHHHcCCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEECC
Confidence 4588899977 6667777778888899999988766666666555555444444544443333
No 70
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=38.85 E-value=72 Score=23.43 Aligned_cols=46 Identities=9% Similarity=0.018 Sum_probs=33.3
Q ss_pred eEEEEEeccCccCCC-chhHHHHHHHHHHHHHHCCCcEEEEecccCC
Q 028963 24 SVLLVIDMQNHFSSI-AKPILDNTLATVQLCRRASIPVFFTRHCHKS 69 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~-~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~ 69 (201)
.-+|+||--..+... .......+..+.+.+++.|.+|+.+.|....
T Consensus 129 ~~~vviD~~~~l~~~~~~~~~~~l~~l~~~~~~~~~~vi~~~h~~~~ 175 (247)
T 2dr3_A 129 AKRVVVDSVTTLYINKPAMARSIILQLKRVLAGTGCTSIFVSQVSVG 175 (247)
T ss_dssp CCEEEEETSGGGTTTCGGGHHHHHHHHHHHHHHTTCEEEEEEECC--
T ss_pred CCEEEECCchHhhcCCHHHHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 458999988877632 2345566677888888999999999887653
No 71
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=38.85 E-value=65 Score=26.19 Aligned_cols=50 Identities=14% Similarity=0.145 Sum_probs=33.4
Q ss_pred CCCCCeEEEEEeccCccCCC-------ch----------hHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 19 PNPKSSVLLVIDMQNHFSSI-------AK----------PILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 19 ~~~~~~aLlviD~Q~~f~~~-------~~----------~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
+...+..|||||--..+.+. .+ .+...+.+|...+++.+++||++.+...
T Consensus 107 i~~~~~~lvVIDSI~aL~~~~eieg~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~tNQV~k 173 (333)
T 3io5_A 107 IERGEKVVVFIDSLGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHTYE 173 (333)
T ss_dssp CCTTCCEEEEEECSTTCBCC--------------CTHHHHHHHHHHHHHHHHHHTTCEEEEEEEC--
T ss_pred hhccCceEEEEecccccccchhccCccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECCeee
Confidence 34556789999977666531 11 1233455677789999999999999866
No 72
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=38.58 E-value=1.1e+02 Score=22.78 Aligned_cols=30 Identities=23% Similarity=0.234 Sum_probs=16.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.. ..-=.+.++.+.++|++|+++
T Consensus 8 k~~lVTGas-~gIG~aia~~l~~~G~~V~~~ 37 (247)
T 2jah_A 8 KVALITGAS-SGIGEATARALAAEGAAVAIA 37 (247)
T ss_dssp CEEEEESCS-SHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEE
Confidence 456666644 333345566666666666554
No 73
>3bch_A 40S ribosomal protein SA; laminin receptor, P40 ribosomal protein, acetylation, cytoplasm, phosphorylation, polymorphism; 2.15A {Homo sapiens}
Probab=38.51 E-value=46 Score=25.98 Aligned_cols=35 Identities=11% Similarity=0.150 Sum_probs=27.9
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCC
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSP 70 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~ 70 (201)
.+|+|+|...+ ...+..|+..|+|||...+.+-+|
T Consensus 153 dlliV~Dp~~e------------~~AI~EA~~lgIPvIalvDTn~dp 187 (253)
T 3bch_A 153 RLLVVTDPRAD------------HQPLTEASYVNLPTIALCNTDSPL 187 (253)
T ss_dssp SEEEESCTTTT------------HHHHHHHHHTTCCEEEEECTTCCC
T ss_pred CEEEEECCCcc------------chHHHHHHHhCCCEEEEEcCCCCc
Confidence 37889998776 345678899999999999887655
No 74
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=38.07 E-value=76 Score=24.04 Aligned_cols=30 Identities=17% Similarity=0.326 Sum_probs=16.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|....+ =.+.|+...++|++|+++
T Consensus 12 k~vlVTGas~GI-G~aia~~la~~G~~V~~~ 41 (262)
T 3ksu_A 12 KVIVIAGGIKNL-GALTAKTFALESVNLVLH 41 (262)
T ss_dssp CEEEEETCSSHH-HHHHHHHHTTSSCEEEEE
T ss_pred CEEEEECCCchH-HHHHHHHHHHCCCEEEEE
Confidence 456666654332 245566666666666654
No 75
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=37.86 E-value=1.1e+02 Score=23.39 Aligned_cols=30 Identities=27% Similarity=0.330 Sum_probs=14.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.... -=.+.|+.+.++|++|+++
T Consensus 25 k~~lVTGas~G-IG~aia~~la~~G~~V~~~ 54 (279)
T 3sju_A 25 QTAFVTGVSSG-IGLAVARTLAARGIAVYGC 54 (279)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCCH-HHHHHHHHHHHCCCEEEEE
Confidence 45555554432 2244555555556555543
No 76
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=37.33 E-value=1.2e+02 Score=23.79 Aligned_cols=32 Identities=13% Similarity=0.021 Sum_probs=24.0
Q ss_pred CCcEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 130 GVEEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 130 gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
.-+.++|+|....+. .+.|+.+.+.|++|+++
T Consensus 45 ~gk~~lVTGas~GIG-~aia~~la~~G~~Vv~~ 76 (317)
T 3oec_A 45 QGKVAFITGAARGQG-RTHAVRLAQDGADIVAI 76 (317)
T ss_dssp TTCEEEESSCSSHHH-HHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeCCCcHHH-HHHHHHHHHCCCeEEEE
Confidence 346888888765443 57788888889988876
No 77
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=37.27 E-value=37 Score=26.11 Aligned_cols=30 Identities=17% Similarity=0.329 Sum_probs=16.0
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.... -=.+.++.+.++|++|+++
T Consensus 22 k~vlVTGas~g-IG~aia~~La~~G~~V~~~ 51 (272)
T 2nwq_A 22 STLFITGATSG-FGEACARRFAEAGWSLVLT 51 (272)
T ss_dssp CEEEESSTTTS-SHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEeCCCCH-HHHHHHHHHHHCCCEEEEE
Confidence 55666664432 3345555555666665554
No 78
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=37.25 E-value=1.1e+02 Score=23.12 Aligned_cols=30 Identities=17% Similarity=0.088 Sum_probs=16.6
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.. ..-=.+.++.+.++|++|+++
T Consensus 22 k~vlVTGas-~gIG~aia~~l~~~G~~V~~~ 51 (273)
T 1ae1_A 22 TTALVTGGS-KGIGYAIVEELAGLGARVYTC 51 (273)
T ss_dssp CEEEEESCS-SHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCc-chHHHHHHHHHHHCCCEEEEE
Confidence 456666643 333445566666666666554
No 79
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=37.07 E-value=39 Score=27.43 Aligned_cols=47 Identities=19% Similarity=0.203 Sum_probs=33.8
Q ss_pred CeEEEEEeccCccCCC------chhHHHHHHHHHHHHHHCCCcEEEEecccCC
Q 028963 23 SSVLLVIDMQNHFSSI------AKPILDNTLATVQLCRRASIPVFFTRHCHKS 69 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~------~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~ 69 (201)
...|||||.-.-.... ...+-+-...|-..|++.++|||.+.+..+.
T Consensus 156 g~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~lsQl~R~ 208 (338)
T 4a1f_A 156 ELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIALVQLNRS 208 (338)
T ss_dssp TEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEEEEECCGG
T ss_pred CCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 5789999976655432 1234455566777899999999999887654
No 80
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=36.98 E-value=40 Score=22.75 Aligned_cols=30 Identities=23% Similarity=0.194 Sum_probs=14.7
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEec
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFST 163 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~ 163 (201)
++++|+|. ...-...+..+.+.|++|+++.
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEE
Confidence 35555554 2233344445555566655553
No 81
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=36.66 E-value=30 Score=28.90 Aligned_cols=31 Identities=16% Similarity=0.092 Sum_probs=24.4
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
++|+|+|-= ..=+++|..+.++|++|+|++-
T Consensus 2 k~VvVIGaG--~~GL~aA~~La~~G~~V~VlEa 32 (501)
T 4dgk_A 2 KPTTVIGAG--FGGLALAIRLQAAGIPVLLLEQ 32 (501)
T ss_dssp CCEEEECCH--HHHHHHHHHHHHTTCCEEEECC
T ss_pred CCEEEECCc--HHHHHHHHHHHHCCCcEEEEcc
Confidence 467777743 4557888999999999999984
No 82
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=36.37 E-value=40 Score=28.05 Aligned_cols=50 Identities=8% Similarity=-0.024 Sum_probs=32.2
Q ss_pred CCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCC-eEEEecCCCCCC
Q 028963 119 NTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGF-RVFFSTDATATS 169 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~-~v~vv~Da~~~~ 169 (201)
+.+|.+.+.+.|..-|+=.|++|--=+...+.-....|- ++++.. |++++
T Consensus 147 N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlh-c~s~Y 197 (385)
T 1vli_A 147 HLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMH-CVAKY 197 (385)
T ss_dssp CHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEE-ECSSS
T ss_pred CHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEe-ccCCC
Confidence 455666666667666667777766666666666666664 666665 66665
No 83
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=36.23 E-value=82 Score=24.05 Aligned_cols=30 Identities=13% Similarity=0.057 Sum_probs=13.7
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... .-=.++|+.+.++|++|+++
T Consensus 13 k~vlITGas~-GIG~~~a~~L~~~G~~V~~~ 42 (311)
T 3o26_A 13 RCAVVTGGNK-GIGFEICKQLSSNGIMVVLT 42 (311)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEecCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3455555432 22234445555555555443
No 84
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=36.12 E-value=97 Score=25.10 Aligned_cols=57 Identities=16% Similarity=0.031 Sum_probs=36.0
Q ss_pred HHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 126 LVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 126 L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+.+.|.++|+-++- .|.+ .++|..+..+|++++++-....+ . .-++.++..|++|+-
T Consensus 88 a~~~g~~~vv~aSs-GN~g-~alA~aa~~~G~~~~iv~p~~~~--~----~k~~~~~~~GA~Vv~ 144 (364)
T 4h27_A 88 WAKQGCAHFVCSSS-GNAG-MAAAYAARQLGVPATIVVPGTTP--A----LTIERLKNEGATVKV 144 (364)
T ss_dssp HHHTTCCEEEECCS-SHHH-HHHHHHHHHHTCCEEEEEETTSC--H----HHHHHHHTTTCEEEE
T ss_pred HHhcCCCEEEEeCC-ChHH-HHHHHHHHHhCCceEEEECCCCC--H----HHHHHHHHcCCEEEE
Confidence 44577777776664 6666 56777788889987776544322 1 234555566777653
No 85
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=36.05 E-value=45 Score=22.67 Aligned_cols=36 Identities=22% Similarity=0.328 Sum_probs=19.0
Q ss_pred CCchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEE
Q 028963 119 NTRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVF 160 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~ 160 (201)
+..+.+.|.+.|.+ ++ ++..+- ..+..+.+.|+.++
T Consensus 19 G~~la~~L~~~g~~-v~--vid~~~---~~~~~~~~~g~~~i 54 (140)
T 3fwz_A 19 GSLLGEKLLASDIP-LV--VIETSR---TRVDELRERGVRAV 54 (140)
T ss_dssp HHHHHHHHHHTTCC-EE--EEESCH---HHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHCCCC-EE--EEECCH---HHHHHHHHcCCCEE
Confidence 45677777777764 22 233332 22334445677653
No 86
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=36.04 E-value=1.5e+02 Score=23.05 Aligned_cols=64 Identities=13% Similarity=0.156 Sum_probs=31.7
Q ss_pred chHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEE
Q 028963 121 RLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYL 188 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v 188 (201)
++.+.+.+..+|-++++ + -...+...+.++.++|.++.|+ .+.+.+.+..+...+..+..+..+
T Consensus 55 sl~el~~~~~~D~viI~-t-P~~~~~~~~~ea~~~Gi~~iVi--~t~G~~~~~~~~l~~~A~~~gv~l 118 (288)
T 2nu8_A 55 TVREAVAATGATASVIY-V-PAPFCKDSILEAIDAGIKLIIT--ITEGIPTLDMLTVKVKLDEAGVRM 118 (288)
T ss_dssp SHHHHHHHHCCCEEEEC-C-CGGGHHHHHHHHHHTTCSEEEE--CCCCCCHHHHHHHHHHHHHHTCEE
T ss_pred CHHHHhhcCCCCEEEEe-c-CHHHHHHHHHHHHHCCCCEEEE--ECCCCCHHHHHHHHHHHHHcCCEE
Confidence 45555554456655554 2 2235566666777777776444 222344433334444444444433
No 87
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=36.00 E-value=45 Score=22.91 Aligned_cols=40 Identities=5% Similarity=0.002 Sum_probs=34.2
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+.....++.++++.+..+..++.|+.+..
T Consensus 34 ~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~ 73 (170)
T 2p5q_A 34 VLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPC 73 (170)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred EEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEEC
Confidence 5778888899998888999999999999888888888754
No 88
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=36.00 E-value=45 Score=22.88 Aligned_cols=40 Identities=3% Similarity=-0.159 Sum_probs=34.1
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+.....++.++++.+..+..|+.||.+..
T Consensus 33 ~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~ 72 (169)
T 2v1m_A 33 VCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPC 72 (169)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred EEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 5778888899998888899999999999888888888764
No 89
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=35.99 E-value=1.4e+02 Score=24.54 Aligned_cols=78 Identities=10% Similarity=0.112 Sum_probs=46.8
Q ss_pred CchHHHHHhCCCcE-EEEee-ccCch-hHHHHHHHHH-hCCCeEEEecCCCCCCCHHHHHHHHHHHhhc---------ce
Q 028963 120 TRLQERLVGMGVEE-VIVCG-VMTNL-CCETTARDAF-VRGFRVFFSTDATATSDLELHEATLKNLAYG---------FA 186 (201)
Q Consensus 120 t~L~~~L~~~gi~~-lvi~G-~~T~~-CV~~Ta~~a~-~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~---------~~ 186 (201)
..|.+.+++.|.++ ++|+| -.... .....+.+.+ +.|+.+.+..+.....+.+.-+.+++.++.. |+
T Consensus 32 ~~l~~~l~~~g~~r~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGG 111 (407)
T 1vlj_A 32 PKIGEEIKNAGIRKVLFLYGGGSIKKNGVYDQVVDSLKKHGIEWVEVSGVKPNPVLSKVHEAVEVAKKEKVEAVLGVGGG 111 (407)
T ss_dssp GGHHHHHHHTTCCEEEEEECSSHHHHSSHHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHTTCSEEEEEESH
T ss_pred HHHHHHHHHcCCCeEEEEECchHHhhccHHHHHHHHHHHcCCeEEEecCccCCCCHHHHHHHHHHHHhcCCCEEEEeCCh
Confidence 36777888777544 44444 21122 2344455544 5688888877777777777777777777653 33
Q ss_pred EEeeHHHHHHh
Q 028963 187 YLFDCERLEAG 197 (201)
Q Consensus 187 ~v~~~~e~~~~ 197 (201)
.++++.-+++.
T Consensus 112 sviD~AK~iA~ 122 (407)
T 1vlj_A 112 SVVDSAKAVAA 122 (407)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 45555555544
No 90
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=35.95 E-value=1.2e+02 Score=25.22 Aligned_cols=35 Identities=17% Similarity=0.139 Sum_probs=26.2
Q ss_pred CCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEec
Q 028963 129 MGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFST 163 (201)
Q Consensus 129 ~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~ 163 (201)
.|-++++|+|.++.+.......-|+..|..++.+.
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~ 82 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVS 82 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEe
Confidence 46789999999988775555555667888887774
No 91
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=35.81 E-value=1.6e+02 Score=23.92 Aligned_cols=64 Identities=11% Similarity=0.013 Sum_probs=35.0
Q ss_pred chHHHHHhCCCcEEE-EeeccC-ch--hHHHHHHHHH-hCCCeEEEecCCCCCCCHHHHHHHHHHHhhc
Q 028963 121 RLQERLVGMGVEEVI-VCGVMT-NL--CCETTARDAF-VRGFRVFFSTDATATSDLELHEATLKNLAYG 184 (201)
Q Consensus 121 ~L~~~L~~~gi~~lv-i~G~~T-~~--CV~~Ta~~a~-~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~ 184 (201)
.|.+.+++.|.++++ |+|-.. .. -....+.+.+ +.|+.+.+..+.....+.+.-+..++.++..
T Consensus 23 ~l~~~l~~~g~~~~livtd~~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~ 91 (387)
T 3bfj_A 23 VVGERCQLLGGKKALLVTDKGLRAIKDGAVDKTLHYLREAGIEVAIFDGVEPNPKDTNVRDGLAVFRRE 91 (387)
T ss_dssp GHHHHHHHTTCSEEEEECCTTTC--CCSSHHHHHHHHHHTTCEEEEECCCCSSCBHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEEECcchhhccchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhc
Confidence 566667766644444 333222 22 1344444444 4677776666655555666666666666543
No 92
>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*
Probab=35.73 E-value=49 Score=25.07 Aligned_cols=41 Identities=22% Similarity=0.163 Sum_probs=33.9
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
.-||+.||=.-+++....+-+...+.++.+++.|++++.+.
T Consensus 4 ~kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~iaT 44 (246)
T 3f9r_A 4 RVLLLFDVDGTLTPPRLCQTDEMRALIKRARGAGFCVGTVG 44 (246)
T ss_dssp SEEEEECSBTTTBSTTSCCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred ceEEEEeCcCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEC
Confidence 45899999999887665667788888999999999888775
No 93
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=35.63 E-value=1.7e+02 Score=23.77 Aligned_cols=64 Identities=17% Similarity=0.114 Sum_probs=40.8
Q ss_pred chHHHHHhCCC-----cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHH
Q 028963 121 RLQERLVGMGV-----EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLE 195 (201)
Q Consensus 121 ~L~~~L~~~gi-----~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~ 195 (201)
.+.+.|+..|. +++.|.|+ -..=...++-+...|.+|+ +.|- +++. .+.....+++.++.++++
T Consensus 160 ~~~~~~~~~G~~~L~GktV~I~G~--GnVG~~~A~~l~~~GakVv-vsD~----~~~~----~~~a~~~ga~~v~~~ell 228 (355)
T 1c1d_A 160 AMKATVAHRGLGSLDGLTVLVQGL--GAVGGSLASLAAEAGAQLL-VADT----DTER----VAHAVALGHTAVALEDVL 228 (355)
T ss_dssp HHHHHHHHTTCCCSTTCEEEEECC--SHHHHHHHHHHHHTTCEEE-EECS----CHHH----HHHHHHTTCEECCGGGGG
T ss_pred HHHHHHHhcCCCCCCCCEEEEECc--CHHHHHHHHHHHHCCCEEE-EEeC----CccH----HHHHHhcCCEEeChHHhh
Confidence 35666777776 69999996 2334567788889999998 7774 3322 111223456667666654
No 94
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=35.53 E-value=1.2e+02 Score=22.46 Aligned_cols=28 Identities=18% Similarity=0.069 Sum_probs=12.2
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
+++|+|.... -=.+.++...++|++|++
T Consensus 7 ~vlITGas~g-IG~~~a~~l~~~G~~v~~ 34 (247)
T 3lyl_A 7 VALVTGASRG-IGFEVAHALASKGATVVG 34 (247)
T ss_dssp EEEESSCSSH-HHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCCh-HHHHHHHHHHHCCCEEEE
Confidence 4445553322 223444444455555444
No 95
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=35.50 E-value=1.3e+02 Score=23.64 Aligned_cols=30 Identities=23% Similarity=0.081 Sum_probs=23.0
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.. ..-=..+++.+.++|++|++.
T Consensus 10 k~~lVTGas-~GIG~~~a~~La~~Ga~Vv~~ 39 (319)
T 1gz6_A 10 RVVLVTGAG-GGLGRAYALAFAERGALVVVN 39 (319)
T ss_dssp CEEEETTTT-SHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCC-cHHHHHHHHHHHHCCCEEEEE
Confidence 678888865 445567888888899988876
No 96
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=35.44 E-value=1.4e+02 Score=22.34 Aligned_cols=30 Identities=13% Similarity=-0.003 Sum_probs=13.7
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... .-=.+.++.+.++|++|+++
T Consensus 10 k~vlVTGas~-giG~~ia~~l~~~G~~V~~~ 39 (260)
T 2ae2_A 10 CTALVTGGSR-GIGYGIVEELASLGASVYTC 39 (260)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3455555432 22234444555555555443
No 97
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=35.30 E-value=1.4e+02 Score=22.52 Aligned_cols=32 Identities=9% Similarity=0.050 Sum_probs=22.8
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEec
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFST 163 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~ 163 (201)
-+.++|+|....+ =.++|+...++|++|+++.
T Consensus 11 ~k~~lVTGas~GI-G~a~a~~la~~G~~V~~~~ 42 (277)
T 3tsc_A 11 GRVAFITGAARGQ-GRAHAVRMAAEGADIIAVD 42 (277)
T ss_dssp TCEEEEESTTSHH-HHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCccHH-HHHHHHHHHHcCCEEEEEe
Confidence 3678888876543 3577788888888887763
No 98
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=35.04 E-value=1.2e+02 Score=22.49 Aligned_cols=24 Identities=17% Similarity=0.151 Sum_probs=11.5
Q ss_pred CCCCCCchHHHHHhCCCcEEEEeec
Q 028963 115 SAFGNTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 115 saf~~t~L~~~L~~~gi~~lvi~G~ 139 (201)
+.+-+..+...|.++|. +|++++-
T Consensus 22 sggiG~~la~~l~~~G~-~V~~~~r 45 (260)
T 3awd_A 22 AQNIGLACVTALAEAGA-RVIIADL 45 (260)
T ss_dssp TSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CchHHHHHHHHHHHCCC-EEEEEeC
Confidence 33444455555555554 3444443
No 99
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=35.00 E-value=1.5e+02 Score=22.52 Aligned_cols=31 Identities=10% Similarity=0.068 Sum_probs=20.2
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
-+.++|+|....+ =.+.|+...++|++|+++
T Consensus 15 gk~~lVTGas~gI-G~a~a~~la~~G~~V~~~ 45 (280)
T 3pgx_A 15 GRVAFITGAARGQ-GRSHAVRLAAEGADIIAC 45 (280)
T ss_dssp TCEEEEESTTSHH-HHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCcHH-HHHHHHHHHHCCCEEEEE
Confidence 3567777766533 346677777777777765
No 100
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=34.98 E-value=43 Score=23.66 Aligned_cols=39 Identities=3% Similarity=-0.155 Sum_probs=34.5
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
.++|++...+|+.....++.++++.+..+..|+.||.+.
T Consensus 40 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is 78 (180)
T 3kij_A 40 VSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFP 78 (180)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEE
T ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEE
Confidence 788899999999888889999999999988888888875
No 101
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=34.97 E-value=89 Score=23.25 Aligned_cols=15 Identities=7% Similarity=-0.177 Sum_probs=6.5
Q ss_pred CCCCchHHHHHh-CCC
Q 028963 117 FGNTRLQERLVG-MGV 131 (201)
Q Consensus 117 f~~t~L~~~L~~-~gi 131 (201)
|-+..+...|.+ .|.
T Consensus 15 gIG~~~a~~L~~~~g~ 30 (276)
T 1wma_A 15 GIGLAIVRDLCRLFSG 30 (276)
T ss_dssp HHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHhcCC
Confidence 333444444444 443
No 102
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=34.93 E-value=1.7e+02 Score=23.69 Aligned_cols=58 Identities=14% Similarity=0.013 Sum_probs=39.3
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEe
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~ 189 (201)
-.+|.++|-- +.-+.+-+..+...|.++.++.--.-..+++..+.+-+..+..|+.+.
T Consensus 179 glkva~vGD~-~nva~Sl~~~~~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~ 236 (340)
T 4ep1_A 179 GIKLAYVGDG-NNVCHSLLLASAKVGMHMTVATPVGYRPNEEIVKKALAIAKETGAEIE 236 (340)
T ss_dssp TCEEEEESCC-CHHHHHHHHHHHHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEE
T ss_pred CCEEEEECCC-chhHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEE
Confidence 4588899976 555666777777789999998876655666655555544445555443
No 103
>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18
Probab=34.80 E-value=52 Score=22.07 Aligned_cols=39 Identities=5% Similarity=0.177 Sum_probs=29.5
Q ss_pred EEEEeccCccCCCch------hHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 26 LLVIDMQNHFSSIAK------PILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 26 LlviD~Q~~f~~~~~------~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
+|++||-.-+++... .+.+...+.++.+++.|++++.+.
T Consensus 3 ~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaT 47 (126)
T 1xpj_A 3 KLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVIST 47 (126)
T ss_dssp EEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEe
Confidence 678898888876432 244677788888899999888776
No 104
>3n4j_A RNA methyltransferase; center for structural genomics of INF diseases, csgid; 1.47A {Yersinia pestis} SCOP: c.116.1.1 PDB: 3n4k_A* 1mxi_A* 1j85_A*
Probab=34.70 E-value=1.2e+02 Score=21.59 Aligned_cols=67 Identities=12% Similarity=-0.009 Sum_probs=47.5
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHH-HHHHHHHHHh-hcceEEeeHHHHHHhhc
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLE-LHEATLKNLA-YGFAYLFDCERLEAGLF 199 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~-~h~~al~~l~-~~~~~v~~~~e~~~~l~ 199 (201)
.|++.++....=+-+-+|.|...|.+.+++...+.+.... ..+.++..+. -....+-+.+++++.|+
T Consensus 6 ~vvL~~~~dp~NlGaI~Rta~a~G~~~viv~~~~~~~~~~~~~ras~g~~~~~~~~~~~~l~~~l~~lk 74 (165)
T 3n4j_A 6 NIVLFEPEIPPNTGNIIRLCANTGCQLHLIKPLGFTWDDKRLRRAGLDYHEFADIKHHHDYQAFLDSEK 74 (165)
T ss_dssp EEEEESCCCHHHHHHHHHHHHHHTCEEEEESCCSSCCCHHHHHHTTCCHHHHTTCEEESSHHHHHHHTT
T ss_pred EEEEeCCCCCCcHHHHHHHHHHcCCeEEEECCCCCCCccHHHHHhccCceeecCeEEeCCHHHHHHHHH
Confidence 6888999999999999999999999999998887766533 3333332222 12334568888888774
No 105
>3vqt_A RF-3, peptide chain release factor 3; translation, GTPase; HET: GDP; 1.80A {Desulfovibrio vulgaris} PDB: 3vr1_A*
Probab=34.66 E-value=26 Score=30.40 Aligned_cols=41 Identities=27% Similarity=0.348 Sum_probs=30.9
Q ss_pred cCCCCCCeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 17 RNPNPKSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 17 ~~~~~~~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
+.+...+.|++|||...+ +-.....+.+.|++.++|+|.+-
T Consensus 119 raL~~~DgAvlVvda~~G-------V~~qT~~v~~~a~~~~lp~i~fI 159 (548)
T 3vqt_A 119 RVLTAVDSALVVIDAAKG-------VEAQTRKLMDVCRMRATPVMTFV 159 (548)
T ss_dssp HHHHSCSEEEEEEETTTB-------SCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhcCceEEEeecCCC-------cccccHHHHHHHHHhCCceEEEE
Confidence 334456789999998887 45567778889999999977543
No 106
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=34.57 E-value=49 Score=29.82 Aligned_cols=83 Identities=17% Similarity=0.095 Sum_probs=50.7
Q ss_pred CCEEEECCCCCCCCCCchHHHHHhCC----CcEEEEe--eccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHH
Q 028963 105 ADEVIEKNTYSAFGNTRLQERLVGMG----VEEVIVC--GVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATL 178 (201)
Q Consensus 105 ~~~vv~K~~~saf~~t~L~~~L~~~g----i~~lvi~--G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al 178 (201)
.|..+. +.|..| ..+.+.+++.. +..|-+. =+..+-=|...-.+|.++|-+|.|+-|.-+..+.++-..-.
T Consensus 343 ~DiLl~-~p~~sf--~~vi~~I~~A~~DP~V~sIk~tlYr~~~ds~Iv~ALi~AA~rGv~V~vLvel~arfdee~ni~wa 419 (705)
T 2o8r_A 343 KDYLIH-VPYYTY--DYVVRLLMEAAISPDVSEIRLTQYRVAENSSIISALEAAAQSGKKVSVFVELKARFDEENNLRLS 419 (705)
T ss_dssp CCEEEE-ETTBCS--HHHHHHHHHHHTCTTEEEEEEEESCCCSCCHHHHHHHHHHHTTCEEEEEECCCSCC----CHHHH
T ss_pred CCeEee-ChhHhH--HHHHHHHHHhccCCCceEEEEEEEEEcCCHHHHHHHHHHHHCCCEEEEEEeCCCCcchhhhHHHH
Confidence 344433 456666 35556666432 2222222 22234667788889999999999999966656665555566
Q ss_pred HHHhhcceEEee
Q 028963 179 KNLAYGFAYLFD 190 (201)
Q Consensus 179 ~~l~~~~~~v~~ 190 (201)
+.|+..|++|+-
T Consensus 420 ~~Le~aGv~Vv~ 431 (705)
T 2o8r_A 420 ERMRRSGIRIVY 431 (705)
T ss_dssp HHHHHHTCEEEE
T ss_pred HHHHHCCCEEEE
Confidence 888888998753
No 107
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=34.48 E-value=96 Score=22.90 Aligned_cols=19 Identities=16% Similarity=0.324 Sum_probs=8.7
Q ss_pred CCchHHHHHhCCCcEEEEee
Q 028963 119 NTRLQERLVGMGVEEVIVCG 138 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G 138 (201)
+..+...|.++|. +|++++
T Consensus 27 G~~ia~~l~~~G~-~V~~~~ 45 (247)
T 3i1j_A 27 GAAAARAYAAHGA-SVVLLG 45 (247)
T ss_dssp HHHHHHHHHHTTC-EEEEEE
T ss_pred HHHHHHHHHHCCC-EEEEEe
Confidence 3444455555554 244444
No 108
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=34.44 E-value=61 Score=24.97 Aligned_cols=31 Identities=19% Similarity=0.187 Sum_probs=19.8
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
-+.++|+|.... -=.+.|+.+.++|++|+++
T Consensus 33 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~ 63 (281)
T 4dry_A 33 GRIALVTGGGTG-VGRGIAQALSAEGYSVVIT 63 (281)
T ss_dssp -CEEEETTTTSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEE
Confidence 357777776543 3356677777777777765
No 109
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=34.44 E-value=1.3e+02 Score=22.43 Aligned_cols=28 Identities=21% Similarity=0.153 Sum_probs=11.7
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
+++|+|... .-=.+.++.+.++|++|++
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~ 31 (256)
T 1geg_A 4 VALVTGAGQ-GIGKAIALRLVKDGFAVAI 31 (256)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEE
Confidence 344444332 2223444444444554444
No 110
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=34.43 E-value=93 Score=22.31 Aligned_cols=46 Identities=17% Similarity=0.250 Sum_probs=32.0
Q ss_pred CeEEEEEeccCccCCCc-------hhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 23 SSVLLVIDMQNHFSSIA-------KPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~-------~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
+.-+||||--..+.+.. ..+..-+..|.+.+++.+.+||.+.|...
T Consensus 105 ~~~lliiD~~~~~l~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~vi~~~h~~~ 157 (220)
T 2cvh_A 105 NFALVVVDSITAHYRAEENRSGLIAELSRQLQVLLWIARKHNIPVIVINQVHF 157 (220)
T ss_dssp TEEEEEEECCCCCTTGGGGSSTTHHHHHHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEcCcHHHhhhcCchHHHHHHHHHHHHHHHHHHHHcCCEEEEEeeEEE
Confidence 57899999888776431 22333445566667888999999988755
No 111
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=34.22 E-value=34 Score=25.75 Aligned_cols=40 Identities=10% Similarity=0.172 Sum_probs=31.7
Q ss_pred EEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 25 VLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 25 aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
=+|++|+---.++.. .+++...+.++.++++|++++++.-
T Consensus 9 kli~~DlDGTLl~~~-~~~~~~~~ai~~l~~~Gi~v~l~Tg 48 (268)
T 3qgm_A 9 KGYIIDIDGVIGKSV-TPIPEGVEGVKKLKELGKKIIFVSN 48 (268)
T ss_dssp SEEEEECBTTTEETT-EECHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEcCcCcEECCC-EeCcCHHHHHHHHHHcCCeEEEEeC
Confidence 489999988777543 3556788899999999999998854
No 112
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=34.05 E-value=81 Score=24.06 Aligned_cols=31 Identities=23% Similarity=0.094 Sum_probs=18.3
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
-+.++|+|... .==.+.|+.+.++|++|+++
T Consensus 28 ~k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (270)
T 3ftp_A 28 KQVAIVTGASR-GIGRAIALELARRGAMVIGT 58 (270)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 35666667543 23345666666777776654
No 113
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=33.76 E-value=98 Score=23.32 Aligned_cols=29 Identities=14% Similarity=0.227 Sum_probs=15.5
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
++++|+|.... -=.+.++.+.++|++|++
T Consensus 5 k~vlVTGas~g-IG~aia~~l~~~G~~vv~ 33 (258)
T 3oid_A 5 KCALVTGSSRG-VGKAAAIRLAENGYNIVI 33 (258)
T ss_dssp CEEEESSCSSH-HHHHHHHHHHHTTCEEEE
T ss_pred CEEEEecCCch-HHHHHHHHHHHCCCEEEE
Confidence 45566665432 224555556666666655
No 114
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=33.74 E-value=1.3e+02 Score=22.48 Aligned_cols=28 Identities=18% Similarity=0.032 Sum_probs=11.5
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
+++|+|... .-=.+.++.+.++|++|++
T Consensus 16 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~ 43 (260)
T 2zat_A 16 VALVTASTD-GIGLAIARRLAQDGAHVVV 43 (260)
T ss_dssp EEEESSCSS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEE
Confidence 444444322 2223344444444444444
No 115
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=33.69 E-value=2.2e+02 Score=24.25 Aligned_cols=64 Identities=14% Similarity=-0.029 Sum_probs=43.3
Q ss_pred HHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC---CCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 126 LVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA---TATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 126 L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da---~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
+.....++++|+|--.- -...|..+...|.+|+++... ....+++..+...+.++..+.++...
T Consensus 182 l~~~~~~~vvViGgG~~--g~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~ 248 (588)
T 3ics_A 182 IDEKKPRHATVIGGGFI--GVEMVENLRERGIEVTLVEMANQVMPPIDYEMAAYVHEHMKNHDVELVFE 248 (588)
T ss_dssp HHHHCCSEEEEECCSHH--HHHHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred HhhcCCCeEEEECCCHH--HHHHHHHHHhCCCeEEEEecCCcccccCCHHHHHHHHHHHHHcCCEEEEC
Confidence 33345678888885433 234566677889999998643 23356777777778888888877653
No 116
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=33.57 E-value=2.1e+02 Score=23.84 Aligned_cols=62 Identities=21% Similarity=0.035 Sum_probs=43.8
Q ss_pred CCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC---C-CCCHHHHHHHHHHHhhcceEEeeHH
Q 028963 129 MGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT---A-TSDLELHEATLKNLAYGFAYLFDCE 192 (201)
Q Consensus 129 ~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~---~-~~~~~~h~~al~~l~~~~~~v~~~~ 192 (201)
...++++|+|--.-.|- .|..+.++|.+|++++-.- . ..+++..+...+.++..+.++....
T Consensus 192 ~~~~~vvVIGgG~ig~E--~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~GV~i~~~~ 257 (490)
T 2bc0_A 192 KDIKRVAVVGAGYIGVE--LAEAFQRKGKEVVLIDVVDTCLAGYYDRDLTDLMAKNMEEHGIQLAFGE 257 (490)
T ss_dssp TTCCEEEEECCSHHHHH--HHHHHHHTTCEEEEEESSSSTTTTTSCHHHHHHHHHHHHTTTCEEEETC
T ss_pred cCCceEEEECCCHHHHH--HHHHHHHCCCeEEEEEcccchhhhHHHHHHHHHHHHHHHhCCeEEEeCC
Confidence 35688999886654443 3455667899999997542 2 4678888888888888888776543
No 117
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=33.32 E-value=98 Score=23.37 Aligned_cols=30 Identities=20% Similarity=0.089 Sum_probs=14.0
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.... -=.++++...++|++|+++
T Consensus 11 k~vlVTGas~g-IG~aia~~l~~~G~~V~~~ 40 (262)
T 3pk0_A 11 RSVVVTGGTKG-IGRGIATVFARAGANVAVA 40 (262)
T ss_dssp CEEEETTCSSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCcH-HHHHHHHHHHHCCCEEEEE
Confidence 44555554332 2234455555555555443
No 118
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=33.26 E-value=1.1e+02 Score=23.48 Aligned_cols=30 Identities=17% Similarity=0.102 Sum_probs=18.0
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|....+ =.+.|+...+.|++|+++
T Consensus 29 k~~lVTGas~GI-G~aia~~la~~G~~V~~~ 58 (283)
T 3v8b_A 29 PVALITGAGSGI-GRATALALAADGVTVGAL 58 (283)
T ss_dssp CEEEEESCSSHH-HHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHH-HHHHHHHHHHCCCEEEEE
Confidence 566666655432 345666666677766654
No 119
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=33.20 E-value=1.5e+02 Score=22.32 Aligned_cols=29 Identities=28% Similarity=0.180 Sum_probs=13.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
+.++|+|... .-=.+.|+.+.++|++|++
T Consensus 27 k~vlITGas~-gIG~a~a~~l~~~G~~V~~ 55 (272)
T 4e3z_A 27 PVVLVTGGSR-GIGAAVCRLAARQGWRVGV 55 (272)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEE
Confidence 3455555433 2234455555555555544
No 120
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=33.11 E-value=79 Score=22.34 Aligned_cols=40 Identities=10% Similarity=0.176 Sum_probs=34.9
Q ss_pred EEEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++. ..+|+.....++.++++.+..+..++.++.+..
T Consensus 33 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~ 73 (187)
T 1we0_A 33 WSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVST 73 (187)
T ss_dssp EEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEES
T ss_pred CEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEEC
Confidence 5788999 889998888999999999999888888888864
No 121
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=33.10 E-value=1.3e+02 Score=24.01 Aligned_cols=60 Identities=17% Similarity=0.105 Sum_probs=36.7
Q ss_pred HHHhCCC----cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 125 RLVGMGV----EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 125 ~L~~~gi----~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.+.+.|. ++++++.-+.|.+ .++|..+..+|++++++-....+ . .-+..++..|++|+-.
T Consensus 61 ~a~~~g~l~~g~~vvv~aSsGN~g-~alA~aa~~~G~~~~iv~p~~~~--~----~k~~~~~~~GA~V~~~ 124 (334)
T 3tbh_A 61 KAEKEGKLIPGKSIVVESSSGNTG-VSLAHLGAIRGYKVIITMPESMS--L----ERRCLLRIFGAEVILT 124 (334)
T ss_dssp HHHHTTSCCTTTCEEEEECSSHHH-HHHHHHHHHHTCEEEEEEETTSC--H----HHHHHHHHTTCEEEEE
T ss_pred HHHHcCCCCCCCeEEEEeCCCHHH-HHHHHHHHHhCCCEEEEECCCCC--H----HHHHHHHHCCCEEEEE
Confidence 3445666 6665665555555 67777788889998777644322 2 2344556667776643
No 122
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=33.03 E-value=1.1e+02 Score=22.47 Aligned_cols=25 Identities=16% Similarity=0.161 Sum_probs=12.0
Q ss_pred CCCCCCCchHHHHHhCCCcEEEEeec
Q 028963 114 YSAFGNTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 114 ~saf~~t~L~~~L~~~gi~~lvi~G~ 139 (201)
-+.+-+..+...|.+.|. +|++++-
T Consensus 19 asggiG~~la~~l~~~G~-~V~~~~r 43 (255)
T 1fmc_A 19 AGAGIGKEIAITFATAGA-SVVVSDI 43 (255)
T ss_dssp TTSHHHHHHHHHHHTTTC-EEEEEES
T ss_pred CccHHHHHHHHHHHHCCC-EEEEEcC
Confidence 334444555555555554 3444443
No 123
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=32.95 E-value=73 Score=26.91 Aligned_cols=46 Identities=11% Similarity=0.118 Sum_probs=33.0
Q ss_pred CeEEEEEeccCccCCCc------hhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 23 SSVLLVIDMQNHFSSIA------KPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~------~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
+..+||||.-..+.... ..+..-+..|...|++.++|||.+.+.++
T Consensus 354 ~~~lvVID~l~~l~~~~~~~~~~~~~~~~~~~Lk~lak~~~i~vi~~~q~~r 405 (503)
T 1q57_A 354 GCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVICHLKN 405 (503)
T ss_dssp CCSEEEEECTTCCCSCCSCCCHHHHHHHHHHHHHHHHHHHTCEEEEEEECCC
T ss_pred CCCEEEEccchhcCCCCCCCCHHHHHHHHHHHHHHHHHHHCCeEEEEEcCCc
Confidence 45699999887664321 12334455677788999999999988775
No 124
>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10
Probab=32.91 E-value=50 Score=24.40 Aligned_cols=39 Identities=15% Similarity=0.360 Sum_probs=31.8
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
||+.|+=.-+++....+.+...+.++.+++.|++++.+.
T Consensus 5 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~i~T 43 (231)
T 1wr8_A 5 AISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIMLVT 43 (231)
T ss_dssp EEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEEEEC
T ss_pred EEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc
Confidence 789999888887655666777888888888999988775
No 125
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=32.91 E-value=53 Score=23.24 Aligned_cols=40 Identities=3% Similarity=-0.170 Sum_probs=34.1
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+.....++.++++.+..+..++.|+.+..
T Consensus 51 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~ 90 (181)
T 2p31_A 51 VSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPC 90 (181)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred EEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEEC
Confidence 5788888889998888899999999999888888888753
No 126
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=32.64 E-value=1e+02 Score=23.08 Aligned_cols=30 Identities=27% Similarity=0.293 Sum_probs=14.3
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|.... ==.+.++.+.++|++|+++
T Consensus 8 k~vlVTGas~G-IG~aia~~l~~~G~~V~~~ 37 (252)
T 3h7a_A 8 ATVAVIGAGDY-IGAEIAKKFAAEGFTVFAG 37 (252)
T ss_dssp CEEEEECCSSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCch-HHHHHHHHHHHCCCEEEEE
Confidence 34555554432 2234455555555555543
No 127
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=32.62 E-value=67 Score=26.63 Aligned_cols=64 Identities=17% Similarity=0.034 Sum_probs=41.6
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceE-EeeHHHHHHhhc
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAY-LFDCERLEAGLF 199 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~-v~~~~e~~~~l~ 199 (201)
+-++|+-......-+.||+-|.+.|-+|+++.-...+.. .+-....+++ |+. |.+.+|++++|.
T Consensus 238 ~~vvVvEA~~kSGsliTA~~Ale~gR~VfavPG~i~~~~---s~G~n~LI~~-GA~lv~~~~Dil~~l~ 302 (382)
T 3maj_A 238 VGVAVIEAAYRSGSLITARRAADQGREVFAVPGSPLDPR---AAGTNDLIKQ-GATLITSASDIVEAVA 302 (382)
T ss_dssp SCEEECCCCTTCTHHHHHHHHHHHTCCEEECCCCTTCGG---GHHHHHHHHT-TCEECSSHHHHHHHHT
T ss_pred CceEEEecCCCCcHHHHHHHHHHhCCcEEEEcCCCCCcc---cccHHHHHHC-CCEEECCHHHHHHHhh
Confidence 345555555556779999999999999999985554321 1222233333 565 445788888764
No 128
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=32.62 E-value=82 Score=23.71 Aligned_cols=29 Identities=24% Similarity=0.167 Sum_probs=14.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
++++|+|... .-=.+.++.+.++|++|++
T Consensus 7 k~vlVTGas~-gIG~aia~~l~~~G~~V~~ 35 (257)
T 3imf_A 7 KVVIITGGSS-GMGKGMATRFAKEGARVVI 35 (257)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEE
Confidence 4555555443 2234555555556666554
No 129
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=32.47 E-value=54 Score=21.68 Aligned_cols=41 Identities=7% Similarity=-0.069 Sum_probs=34.3
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
.++|++...+|+......+.+.++.+..+..++.++.+...
T Consensus 33 ~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d 73 (148)
T 3hcz_A 33 YTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIE 73 (148)
T ss_dssp EEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEec
Confidence 57788889999988889999999999998888888777543
No 130
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=32.35 E-value=28 Score=26.22 Aligned_cols=67 Identities=16% Similarity=0.121 Sum_probs=44.2
Q ss_pred HHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCC--eEEEecCCCCCCCH---HHHHHHHHHHhhcceEEeeHHHHHH
Q 028963 124 ERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGF--RVFFSTDATATSDL---ELHEATLKNLAYGFAYLFDCERLEA 196 (201)
Q Consensus 124 ~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~--~v~vv~Da~~~~~~---~~h~~al~~l~~~~~~v~~~~e~~~ 196 (201)
+..++.||++|||+-..- .||+-+.+ .+ ++++|+=-.+-..+ +.-+...+.|+..|..|++..-++.
T Consensus 45 era~e~~Ik~iVVASssG-----~TA~k~~e-~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~t~tH~ls 116 (206)
T 1t57_A 45 ERADQLGIRNFVVASVSG-----ETALRLSE-MVEGNIVSVTHHAGFREKGQLELEDEARDALLERGVNVYAGSHALS 116 (206)
T ss_dssp HHHHHHTCCEEEEECSSS-----HHHHHHHT-TCCSEEEEECCCTTSSSTTCCSSCHHHHHHHHHHTCEEECCSCTTT
T ss_pred HHHHHcCCCEEEEEeCCC-----HHHHHHHH-HccCCEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEEEeecccc
Confidence 445578999999986543 46666665 34 99999876654432 2234556667778888887665543
No 131
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=32.25 E-value=61 Score=23.12 Aligned_cols=41 Identities=10% Similarity=-0.045 Sum_probs=34.1
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
.++|++...+|+.....++.++++.+..+..++.||.+...
T Consensus 50 ~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d 90 (190)
T 2vup_A 50 PLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCN 90 (190)
T ss_dssp CEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECC
T ss_pred EEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcC
Confidence 46777788899888888999999999998888988888643
No 132
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=32.23 E-value=1.5e+02 Score=22.43 Aligned_cols=26 Identities=0% Similarity=-0.092 Sum_probs=14.5
Q ss_pred CCCCCCCCchHHHHHhCCCcEEEEeec
Q 028963 113 TYSAFGNTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 113 ~~saf~~t~L~~~L~~~gi~~lvi~G~ 139 (201)
+-+.+-+..+...|.+.|.+ |++++-
T Consensus 38 GasggIG~~la~~L~~~G~~-V~~~~r 63 (272)
T 1yb1_A 38 GAGHGIGRLTAYEFAKLKSK-LVLWDI 63 (272)
T ss_dssp TTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCchHHHHHHHHHHHCCCE-EEEEEc
Confidence 44444456666666666653 555444
No 133
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=32.16 E-value=83 Score=22.56 Aligned_cols=58 Identities=12% Similarity=0.102 Sum_probs=39.4
Q ss_pred CchHHHHHhCCCcEEEEeeccCch--hHHHHHHHHHhC-CCeEEEecCCCCCCCHHHHHHHH
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNL--CCETTARDAFVR-GFRVFFSTDATATSDLELHEATL 178 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~--CV~~Ta~~a~~~-G~~v~vv~Da~~~~~~~~h~~al 178 (201)
.-|.++|++.|++-. -.++..|- -+..+...+.++ ++++++.+=.++-...+....++
T Consensus 31 ~~l~~~L~~~G~~v~-~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~~~D~t~ea~ 91 (172)
T 1mkz_A 31 HYLRDSAQEAGHHVV-DKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEAL 91 (172)
T ss_dssp HHHHHHHHHTTCEEE-EEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSSTTCCHHHHH
T ss_pred HHHHHHHHHCCCeEe-EEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCCCHHHHH
Confidence 468899999998533 33444443 566777788887 79999999888776544433333
No 134
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=32.04 E-value=1.2e+02 Score=23.24 Aligned_cols=58 Identities=12% Similarity=0.056 Sum_probs=38.7
Q ss_pred CcEEEEeeccCchhH-HHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEe
Q 028963 131 VEEVIVCGVMTNLCC-ETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 131 i~~lvi~G~~T~~CV-~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~ 189 (201)
.+-+|+||---|..- +..||.+..+||+|.|+-=.-. ...+.++..++.++..++.+.
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~-~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYNPVVFYPKRS-ERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCCEEEECCCCC-TTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEcCCC-CCCHHHHHHHHHHHHcCCcEE
Confidence 356889996555443 4788999999999998742211 223556667777777666554
No 135
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=32.00 E-value=1.1e+02 Score=23.19 Aligned_cols=29 Identities=17% Similarity=0.113 Sum_probs=12.4
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
++++|+|....+ =.+.++...++|++|++
T Consensus 19 k~~lVTGas~gI-G~aia~~l~~~G~~V~~ 47 (270)
T 3is3_A 19 KVALVTGSGRGI-GAAVAVHLGRLGAKVVV 47 (270)
T ss_dssp CEEEESCTTSHH-HHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCchH-HHHHHHHHHHCCCEEEE
Confidence 344444443322 23444444444554444
No 136
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=31.96 E-value=1.6e+02 Score=22.99 Aligned_cols=57 Identities=16% Similarity=0.019 Sum_probs=33.8
Q ss_pred HhCCC----cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 127 VGMGV----EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 127 ~~~gi----~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.+.|. ++|+-++ +.|.+. +.|..+..+|++++++-....+ + .-++.++..|++|+-.
T Consensus 53 ~~~g~~~~g~~vv~~s-sGN~g~-a~A~~a~~~G~~~~iv~p~~~~--~----~k~~~~~~~Ga~v~~~ 113 (303)
T 2v03_A 53 EKRGEIKPGDVLIEAT-SGNTGI-ALAMIAALKGYRMKLLMPDNMS--Q----ERRAAMRAYGAELILV 113 (303)
T ss_dssp HHTTCCCTTCEEEEEC-SSHHHH-HHHHHHHHHTCEEEEEEETTSC--H----HHHHHHHHTTCEEEEE
T ss_pred HHcCCCCCCCEEEEEC-CcHHHH-HHHHHHHHcCCcEEEEECCCCC--H----HHHHHHHHcCCEEEEE
Confidence 34555 4555554 566665 6777777899998877654322 2 2334555567776543
No 137
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=31.90 E-value=77 Score=24.10 Aligned_cols=34 Identities=15% Similarity=0.049 Sum_probs=27.5
Q ss_pred CcEEEEeecc---------------CchhHHHHHHHHHhCCCeEEEecC
Q 028963 131 VEEVIVCGVM---------------TNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 131 i~~lvi~G~~---------------T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
-++++|+|-. +..--.+.|+.+..+|++|+++..
T Consensus 8 gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~ 56 (226)
T 1u7z_A 8 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSG 56 (226)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEEC
Confidence 3678899986 566677889999999999999743
No 138
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=31.84 E-value=1.2e+02 Score=23.15 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=14.1
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
++++|+|....+ =.+.|+.+.++|++|++
T Consensus 9 k~vlVTGas~GI-G~aia~~la~~G~~V~~ 37 (280)
T 3tox_A 9 KIAIVTGASSGI-GRAAALLFAREGAKVVV 37 (280)
T ss_dssp CEEEESSTTSHH-HHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCcHH-HHHHHHHHHHCCCEEEE
Confidence 455555544322 23445555555555544
No 139
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=31.81 E-value=1.2e+02 Score=23.76 Aligned_cols=28 Identities=18% Similarity=0.222 Sum_probs=11.4
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
+++|+|...-+. .+.++.+.++|++|++
T Consensus 10 ~vlVTGas~gIG-~~la~~l~~~G~~Vv~ 37 (319)
T 3ioy_A 10 TAFVTGGANGVG-IGLVRQLLNQGCKVAI 37 (319)
T ss_dssp EEEEETTTSTHH-HHHHHHHHHTTCEEEE
T ss_pred EEEEcCCchHHH-HHHHHHHHHCCCEEEE
Confidence 444444432221 3344444444444443
No 140
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=31.71 E-value=2e+02 Score=23.06 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=40.9
Q ss_pred CCchHHHHHhCCCcEEEEeeccCchh---HHHHHHHHH-hCCCeEEEecCCCCCC
Q 028963 119 NTRLQERLVGMGVEEVIVCGVMTNLC---CETTARDAF-VRGFRVFFSTDATATS 169 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~~T~~C---V~~Ta~~a~-~~G~~v~vv~Da~~~~ 169 (201)
+.++.+.+-+.|++-|||.|+-.-.. .......+. ++|..|++.+-|..+.
T Consensus 228 ~~~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~~gi~VV~~Sr~~~G~ 282 (331)
T 1agx_A 228 MPDAYQAFAKAGVKAIIHAGTGNGSMANYLVPEVRKLHDEQGLQIVRSSRVAQGF 282 (331)
T ss_dssp CTHHHHHHHTTTCSEEEEEEBTTTBCCTTHHHHHHHHHHTTCCEEEEEESSCSSC
T ss_pred CHHHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHcCCCEEEEECCCCCCC
Confidence 45666677778999999999876554 777888898 9999999999887553
No 141
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=31.55 E-value=55 Score=22.11 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=33.2
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+......+.+.++.+.....++.++.+..
T Consensus 31 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~ 70 (152)
T 2lrn_A 31 YVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVST 70 (152)
T ss_dssp EEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEEC
T ss_pred EEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEc
Confidence 5777888899998888899999999988877888877753
No 142
>3hs2_A PHD protein, prevent HOST death protein; intrinsic disorder, DOC, toxin-anti antitoxin; 2.20A {Enterobacteria phage P1}
Probab=31.49 E-value=54 Score=18.89 Aligned_cols=26 Identities=19% Similarity=0.054 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHHHHCCCcEEEEeccc
Q 028963 41 PILDNTLATVQLCRRASIPVFFTRHCH 67 (201)
Q Consensus 41 ~~i~~i~~l~~~ar~~g~~vi~~~~~~ 67 (201)
....+..++++.+ ..|-||+.+++..
T Consensus 8 ear~~l~~ll~~v-~~~e~v~Itr~g~ 33 (58)
T 3hs2_A 8 TARGNLSEVLNNV-EAGEEVEITRRGR 33 (58)
T ss_dssp HHHHSHHHHHHHH-HTTCCEEEECTTS
T ss_pred HHHHhHHHHHHHH-hCCCcEEEEECCC
Confidence 4567788899988 5889999998664
No 143
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=31.32 E-value=1.2e+02 Score=22.08 Aligned_cols=30 Identities=17% Similarity=0.324 Sum_probs=20.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|..... =.+.++.+.++|++|+++
T Consensus 3 k~vlITGas~gI-G~~ia~~l~~~G~~V~~~ 32 (235)
T 3l77_A 3 KVAVITGASRGI-GEAIARALARDGYALALG 32 (235)
T ss_dssp CEEEEESCSSHH-HHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCcHH-HHHHHHHHHHCCCEEEEE
Confidence 467788866443 356777778888887765
No 144
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=31.16 E-value=2.3e+02 Score=23.53 Aligned_cols=60 Identities=17% Similarity=0.037 Sum_probs=41.1
Q ss_pred CCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC---CCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 130 GVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA---TATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 130 gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da---~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
..++++|+|--... ...|..+..+|.+|+++.-. ....+++..+...+.++..+.++...
T Consensus 185 ~~~~vvViGgG~~g--~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 247 (480)
T 3cgb_A 185 KVEDVTIIGGGAIG--LEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKEADKHHIEILTN 247 (480)
T ss_dssp CCCEEEEECCHHHH--HHHHHHHHHTTCEEEEECCGGGTTSSSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCCeEEEECCCHHH--HHHHHHHHhcCCeEEEEEeCCchhhcCCHHHHHHHHHHHHHcCcEEEcC
Confidence 56788888765333 34455667889999998743 23456777777778888777777643
No 145
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=31.12 E-value=53 Score=22.50 Aligned_cols=41 Identities=15% Similarity=-0.075 Sum_probs=33.4
Q ss_pred EEEEeccC-ccCCCchhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 26 LLVIDMQN-HFSSIAKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 26 LlviD~Q~-~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
.++|.+.. .+++.....++.++++.+..+..|+.||.+...
T Consensus 37 ~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d 78 (163)
T 3gkn_A 37 WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRD 78 (163)
T ss_dssp CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45666776 788777788999999999999999999888653
No 146
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=30.72 E-value=2.2e+02 Score=23.38 Aligned_cols=59 Identities=17% Similarity=-0.031 Sum_probs=40.4
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC---CCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT---ATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~---~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|--.-.| ..|..+.++|.+|++++..- ...+++..+...+.++..+.++...
T Consensus 167 ~~~vvIiGgG~~g~--e~A~~l~~~g~~V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 228 (455)
T 2yqu_A 167 PKRLIVVGGGVIGL--ELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTG 228 (455)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred CCeEEEECCCHHHH--HHHHHHHHcCCEEEEEecCCccccccCHHHHHHHHHHHHHCCCEEEEC
Confidence 47898888654433 34556677899999997542 3346777777777777777776643
No 147
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=30.63 E-value=54 Score=22.09 Aligned_cols=41 Identities=10% Similarity=0.004 Sum_probs=34.5
Q ss_pred EEEEeccCccCCC--chhHHHHHHHHHHHH-HHCCCcEEEEecc
Q 028963 26 LLVIDMQNHFSSI--AKPILDNTLATVQLC-RRASIPVFFTRHC 66 (201)
Q Consensus 26 LlviD~Q~~f~~~--~~~~i~~i~~l~~~a-r~~g~~vi~~~~~ 66 (201)
.++|++...+|++ .....+.+.++.+.. +..++.+|.+...
T Consensus 35 ~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d 78 (150)
T 3fw2_A 35 SLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLD 78 (150)
T ss_dssp EEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECC
T ss_pred EEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcC
Confidence 6788999999999 888999999999988 7777878777543
No 148
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=30.61 E-value=81 Score=25.75 Aligned_cols=48 Identities=8% Similarity=0.151 Sum_probs=32.8
Q ss_pred CCeEEEEEeccCccCCCc---------------hhHHHHHHHHHHHHHHCCCcEEEEecccCC
Q 028963 22 KSSVLLVIDMQNHFSSIA---------------KPILDNTLATVQLCRRASIPVFFTRHCHKS 69 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~~---------------~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~ 69 (201)
.+..|||||.-..+.... +.+...+.+|...+++.+++||++.+....
T Consensus 151 ~~~~lVVIDsl~~l~~~~e~~g~~gd~~~~~~~r~~~~~lr~L~~~a~~~~~~VI~~nq~~~~ 213 (366)
T 1xp8_A 151 GAIDVVVVDSVAALTPRAEIEGDMGDSLPGLQARLMSQALRKLTAILSKTGTAAIFINQVREK 213 (366)
T ss_dssp TCCSEEEEECTTTCCCSTTC--------CCHHHHHHHHHHHHHHHHHTTTCCEEEEEEEC---
T ss_pred CCCCEEEEeChHHhccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEEEEEEecccc
Confidence 346799999988776310 123455666777789999999999887653
No 149
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=30.47 E-value=79 Score=26.47 Aligned_cols=43 Identities=12% Similarity=0.176 Sum_probs=30.9
Q ss_pred EEEEeccCccCCCc-----h-hHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 26 LLVIDMQNHFSSIA-----K-PILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 26 LlviD~Q~~f~~~~-----~-~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
+||||.-+.+.... . .+..-...|...|++.|+|||.+.+.++
T Consensus 313 lIVID~Lq~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~lsql~r 361 (444)
T 3bgw_A 313 IVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQLSR 361 (444)
T ss_dssp EEEEECSTTSBCSCSSSCHHHHHHHHHHHHHHHHHHHTCEEEEEEECCG
T ss_pred EEEEecHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEecCCc
Confidence 99999888765321 1 2334445677788999999999988654
No 150
>3r8n_B 30S ribosomal protein S2; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_B 3fih_B* 3j18_B* 2wwl_B 3oar_B 3oaq_B 3ofb_B 3ofa_B 3ofp_B 3ofx_B 3ofy_B 3ofo_B 3r8o_B 4a2i_B 4gd1_B 4gd2_B 3i1m_B 1vs7_B* 3e1a_B 3e1c_B ...
Probab=30.17 E-value=49 Score=25.15 Aligned_cols=36 Identities=25% Similarity=0.456 Sum_probs=27.8
Q ss_pred CeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCC
Q 028963 23 SSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSP 70 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~ 70 (201)
..+|+|+|...+. ..+..|+..|+|||...+.+-+|
T Consensus 150 Pdllvv~Dp~~e~------------~ai~Ea~~l~IP~IalvDTn~~p 185 (218)
T 3r8n_B 150 PDALFVIDADHEH------------IAIKEANNLGIPVFAIVDTNSDP 185 (218)
T ss_dssp CCSCEEEETGGGH------------HHHHHHHHHTCCCEEECCSSSCC
T ss_pred CCeEEecCccccc------------HHHHHHHHhCCCEEEEEeCcCCC
Confidence 3489999987753 34667888999999998887655
No 151
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=30.15 E-value=1.6e+02 Score=22.27 Aligned_cols=30 Identities=17% Similarity=0.147 Sum_probs=14.5
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|...- -=.+.++.+.++|++|+++
T Consensus 12 k~vlVTGas~g-IG~aia~~l~~~G~~V~~~ 41 (281)
T 3svt_A 12 RTYLVTGGGSG-IGKGVAAGLVAAGASVMIV 41 (281)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCEEEEE
Confidence 45555554332 2234455555555555543
No 152
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=30.15 E-value=2.4e+02 Score=23.55 Aligned_cols=65 Identities=12% Similarity=-0.074 Sum_probs=42.2
Q ss_pred EEEEee------ccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHh
Q 028963 133 EVIVCG------VMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAG 197 (201)
Q Consensus 133 ~lvi~G------~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~ 197 (201)
+|.++| -.++.-+.+-+..+...|.+|.++.-..-...++..+.+-+.....|+.+.-+.++-++
T Consensus 190 kva~vgd~~~s~Gd~nnVa~Sli~~l~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G~~v~~~~d~~ea 260 (418)
T 2yfk_A 190 KVAMTWAYSPSYGKPLSVPQGIVGLMTRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFGGNFTKTNSMAEA 260 (418)
T ss_dssp EEEEECCCCSSSCCCSHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHSSEEEEESCHHHH
T ss_pred EEEEEeccccccCccchHHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCEEEEEcCHHHH
Confidence 777777 23344555666667788999999888666667776666666666666655444444333
No 153
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=30.12 E-value=63 Score=22.14 Aligned_cols=13 Identities=23% Similarity=0.038 Sum_probs=5.7
Q ss_pred HHHHhCCCeEEEe
Q 028963 150 RDAFVRGFRVFFS 162 (201)
Q Consensus 150 ~~a~~~G~~v~vv 162 (201)
..+.+.|++|+++
T Consensus 20 ~~L~~~g~~V~vi 32 (153)
T 1id1_A 20 LQLNQRGQNVTVI 32 (153)
T ss_dssp HHHHHTTCCEEEE
T ss_pred HHHHHCCCCEEEE
Confidence 3334444444444
No 154
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=29.99 E-value=2.3e+02 Score=23.31 Aligned_cols=59 Identities=17% Similarity=-0.110 Sum_probs=40.9
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC---CCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA---TATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da---~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|----.| ..|..+.++|.+|++++-. ....+++..+...+.++..+.++...
T Consensus 183 ~~~vvViGgG~~g~--e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 244 (478)
T 1v59_A 183 PKRLTIIGGGIIGL--EMGSVYSRLGSKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLS 244 (478)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHHTTCEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CceEEEECCCHHHH--HHHHHHHHcCCEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 47888888554333 3455667789999999743 23456777777788888777776643
No 155
>2w3q_A Carbonic anhydrase 2; lyase, inhibition, sulfonamide; 1.34A {Cryptococcus neoformans} PDB: 2w3n_A
Probab=29.97 E-value=1.3e+02 Score=23.04 Aligned_cols=47 Identities=21% Similarity=0.325 Sum_probs=34.9
Q ss_pred CCCCEEEECCCCCCCCCCc------hHHHHHhCCCcEEEEeeccCchhHHHHH
Q 028963 103 AGADEVIEKNTYSAFGNTR------LQERLVGMGVEEVIVCGVMTNLCCETTA 149 (201)
Q Consensus 103 ~~~~~vv~K~~~saf~~t~------L~~~L~~~gi~~lvi~G~~T~~CV~~Ta 149 (201)
.++|..+.++--+.....+ |+-.....|+++|+|+|=.-..-|.++.
T Consensus 86 ~pGdlFViRNaGN~V~~~d~~~~asleyAV~~L~V~~IvV~GHs~CGav~Aa~ 138 (243)
T 2w3q_A 86 KPGDVFVQRNVANQFKPEDDSSQALLNYAIMNVGVTHVMVVGHTGCGGCIAAF 138 (243)
T ss_dssp CTTSEEEEEEGGGCCCTTCHHHHHHHHHHHHTTCCCEEEEEEETTCHHHHHHH
T ss_pred CCCcEEEEeccCcccCCCCchhHHHHHHHHHhcCCCEEEEeccCCcchHHHhh
Confidence 6789888888766664332 5556677999999999988777665543
No 156
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=29.93 E-value=1.1e+02 Score=23.03 Aligned_cols=31 Identities=16% Similarity=0.220 Sum_probs=19.8
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
-++++|+|....+ =.+.++...++|++|+++
T Consensus 8 ~k~vlVTGas~GI-G~aia~~la~~G~~V~~~ 38 (259)
T 3edm_A 8 NRTIVVAGAGRDI-GRACAIRFAQEGANVVLT 38 (259)
T ss_dssp TCEEEEETTTSHH-HHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCchH-HHHHHHHHHHCCCEEEEE
Confidence 3567777765433 356677777777777765
No 157
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=29.91 E-value=81 Score=23.28 Aligned_cols=41 Identities=10% Similarity=-0.034 Sum_probs=35.0
Q ss_pred EEEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 26 LLVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 26 LlviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
.++|++. ..|++.....++.++++.+.++..++.||.+...
T Consensus 58 ~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D 99 (220)
T 1zye_A 58 YLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVD 99 (220)
T ss_dssp EEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESS
T ss_pred eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECC
Confidence 5778888 8899988889999999999999889888888643
No 158
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=29.84 E-value=1.3e+02 Score=20.35 Aligned_cols=66 Identities=14% Similarity=-0.005 Sum_probs=39.6
Q ss_pred hHHHHHhCCCcEEEEeecc-CchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEe
Q 028963 122 LQERLVGMGVEEVIVCGVM-TNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 122 L~~~L~~~gi~~lvi~G~~-T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~ 189 (201)
+.+.+++.. ++|.|+... ++--+......|.++|-+|.++.|....... .....++.|...|++|.
T Consensus 19 ~~~~i~~A~-~~I~i~~~~~~~~~i~~aL~~a~~rGV~Vril~~~~~~~~~-~~~~~~~~L~~~gv~v~ 85 (155)
T 1byr_A 19 VLSAIDSAK-TSIRMMAYSFTAPDIMKALVAAKKRGVDVKIVIDERGNTGR-ASIAAMNYIANSGIPLR 85 (155)
T ss_dssp HHHHHHHCS-SEEEEEESSBCCHHHHHHHHHHHHTTCEEEEEEESTTCCSH-HHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHh-hEEEEEEEEeCCHHHHHHHHHHHHCCCEEEEEEeCcccccc-ccHHHHHHHHHCCCeEE
Confidence 334444332 456555432 4445666677788899999999887765432 23345566666666554
No 159
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=29.82 E-value=84 Score=25.71 Aligned_cols=61 Identities=16% Similarity=0.105 Sum_probs=35.7
Q ss_pred HhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 127 VGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 127 ~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
++.|.+++++..-+-|.++ ++|..+..+|++++++-... +....+..+..|+..|++|+..
T Consensus 98 ~~~g~~~vi~e~ssGNhg~-a~A~aa~~~G~~~~i~mp~~---~~~~~~~~~~~~~~~GA~V~~v 158 (396)
T 1qop_B 98 KRMGKSEIIAETGAGQHGV-ASALASALLGLKCRIYMGAK---DVERQSPNVFRMRLMGAEVIPV 158 (396)
T ss_dssp HHTTCCEEEEEESSSHHHH-HHHHHHHHHTCEEEEEEEHH---HHHHCHHHHHHHHHTTCEEEEE
T ss_pred HHcCcCEEEEecCchHHHH-HHHHHHHHCCCcEEEEEcCC---chhhhhhHHHHHHHCCCEEEEE
Confidence 3477777776333445555 56666778899888775331 1111123346667777777643
No 160
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=29.77 E-value=1.7e+02 Score=21.71 Aligned_cols=51 Identities=8% Similarity=0.016 Sum_probs=28.0
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC----------CCCCHHHHHHHHHHHhh
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT----------ATSDLELHEATLKNLAY 183 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~----------~~~~~~~h~~al~~l~~ 183 (201)
++++|+|.... -=.+.|+.+.++|++|+++.--- .-.+.+..+.+++.+..
T Consensus 23 k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~d~~d~~~v~~~~~~~~~ 83 (251)
T 3orf_A 23 KNILVLGGSGA-LGAEVVKFFKSKSWNTISIDFRENPNADHSFTIKDSGEEEIKSVIEKINS 83 (251)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCCTTSSEEEECSCSSHHHHHHHHHHHHT
T ss_pred CEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCcccccccceEEEeCCHHHHHHHHHHHHH
Confidence 46777776543 33566666777777766653221 12244555556665543
No 161
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=29.64 E-value=1.6e+02 Score=22.38 Aligned_cols=15 Identities=27% Similarity=0.370 Sum_probs=6.7
Q ss_pred HHHHHHHhCCCeEEE
Q 028963 147 TTARDAFVRGFRVFF 161 (201)
Q Consensus 147 ~Ta~~a~~~G~~v~v 161 (201)
+.|+.+.++|++|++
T Consensus 44 aia~~la~~G~~V~~ 58 (280)
T 4da9_A 44 GIARALAASGFDIAI 58 (280)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCeEEE
Confidence 344444444444443
No 162
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=29.58 E-value=1.6e+02 Score=23.99 Aligned_cols=66 Identities=15% Similarity=-0.016 Sum_probs=45.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHh
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAG 197 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~ 197 (201)
-+|.++|-..+..+.+.+..+...|++|.++.--.--.+++.-+.+-+.....++.+.-+.++-++
T Consensus 182 l~ia~vGD~~~~va~S~~~~~~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~v~~~~d~~ea 247 (358)
T 4h31_A 182 IQFAYLGDARNNVGNSLMVGAAKMGMDIRLVGPQAYWPDEELVAACQAIAKQTGGKITLTENVAEG 247 (358)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHH
T ss_pred eEEEecCCCCcccchHHHHHHHhcCceEEEeCCcccCCCHHHHHHHHHHHHHcCCcceeccCHHHH
Confidence 378899966566666777788888999999877666666666666655555666666555444443
No 163
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=29.45 E-value=2e+02 Score=22.45 Aligned_cols=61 Identities=11% Similarity=0.144 Sum_probs=34.7
Q ss_pred CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhc
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYG 184 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~ 184 (201)
+++.+.|...+++-|+++-- +......+..+.++|..|++ +--.+.+.+..+...+..+..
T Consensus 61 ~~~~~~l~~~~~D~V~i~tp--~~~h~~~~~~al~~G~~v~~--eKp~~~~~~~~~~l~~~a~~~ 121 (346)
T 3cea_A 61 TNYKDMIDTENIDAIFIVAP--TPFHPEMTIYAMNAGLNVFC--EKPLGLDFNEVDEMAKVIKSH 121 (346)
T ss_dssp SCHHHHHTTSCCSEEEECSC--GGGHHHHHHHHHHTTCEEEE--CSCCCSCHHHHHHHHHHHHTC
T ss_pred CCHHHHhcCCCCCEEEEeCC--hHhHHHHHHHHHHCCCEEEE--cCCCCCCHHHHHHHHHHHHhC
Confidence 35677777667887777632 33445667778888876665 222233444444444444444
No 164
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=29.40 E-value=1.8e+02 Score=21.81 Aligned_cols=41 Identities=15% Similarity=0.054 Sum_probs=22.8
Q ss_pred chHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 121 RLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
.+.+.|.+++++-||+++...+. .....+.+.|+.++++..
T Consensus 57 ~~~~~l~~~~vdgiIi~~~~~~~---~~~~~l~~~~iPvV~i~~ 97 (288)
T 3gv0_A 57 PIRYILETGSADGVIISKIEPND---PRVRFMTERNMPFVTHGR 97 (288)
T ss_dssp HHHHHHHHTCCSEEEEESCCTTC---HHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHcCCccEEEEecCCCCc---HHHHHHhhCCCCEEEECC
Confidence 34455556677777776654332 233445556777666544
No 165
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=29.31 E-value=1.1e+02 Score=23.03 Aligned_cols=20 Identities=15% Similarity=0.330 Sum_probs=9.0
Q ss_pred CCchHHHHHhCCCcEEEEeec
Q 028963 119 NTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~ 139 (201)
+..+...|.+.|.+ |++++-
T Consensus 25 G~~ia~~l~~~G~~-V~~~~r 44 (256)
T 3gaf_A 25 GRAIAGTFAKAGAS-VVVTDL 44 (256)
T ss_dssp HHHHHHHHHHHTCE-EEEEES
T ss_pred HHHHHHHHHHCCCE-EEEEeC
Confidence 34444555544543 444443
No 166
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=29.28 E-value=49 Score=26.71 Aligned_cols=41 Identities=15% Similarity=-0.175 Sum_probs=33.0
Q ss_pred hHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhC--CCeEEEe
Q 028963 122 LQERLVGMGVEEVIVCGVMTNLCCETTARDAFVR--GFRVFFS 162 (201)
Q Consensus 122 L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~--G~~v~vv 162 (201)
+.+.++..+.++|+++|.-++..+...+...+.+ |..+.++
T Consensus 34 ~~~~~~~~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~~~~~ 76 (344)
T 3fj1_A 34 VAAVLRLRDPSFVATVARGSSDHVCTYLSYAAELLLGLPVASL 76 (344)
T ss_dssp HHHHHHHHCCSEEEEECCTHHHHHHHHHHHHHHHHHCCCEEEC
T ss_pred HHHHHhhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCcEEEe
Confidence 3445666789999999999999888888877764 8888874
No 167
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=29.05 E-value=1.1e+02 Score=23.42 Aligned_cols=34 Identities=9% Similarity=0.023 Sum_probs=27.2
Q ss_pred CCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 130 GVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 130 gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
.-+.++|+|-...+ =.++|+...+.|++|++...
T Consensus 10 ~GK~alVTGas~GI-G~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 10 RGKRALITAGTKGA-GAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp TTCEEEESCCSSHH-HHHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEeccCcHH-HHHHHHHHHHcCCEEEEEEC
Confidence 45789999976644 47899999999999988753
No 168
>1mgp_A Hypothetical protein TM841; two domain structure with mixed alpha/beta structures in BOTH domains, structural genomics; HET: PLM; 2.00A {Thermotoga maritima} SCOP: c.119.1.1 PDB: 1vpv_A*
Probab=29.04 E-value=1.7e+02 Score=23.35 Aligned_cols=70 Identities=16% Similarity=0.089 Sum_probs=45.2
Q ss_pred HHhCCCcEEEEeeccCchhH-HHHHHHHHhC-CCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 126 LVGMGVEEVIVCGVMTNLCC-ETTARDAFVR-GFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 126 L~~~gi~~lvi~G~~T~~CV-~~Ta~~a~~~-G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
|.+.|.++|+...++....- .++|..|.+. +.+|+|+--.+.+......-.....|...|. +.+|+++.+
T Consensus 103 l~~~g~d~Ii~I~iSs~LSGTy~sA~~Aa~~~~~~I~ViDS~~~s~g~g~lv~~Aa~l~~~G~---s~eeI~~~l 174 (313)
T 1mgp_A 103 YKEEDYDVVLVLTLSSKLSGTYNSAVLASKEVDIPVYVVDTLLASGAIPLPARVAREMLENGA---TIEEVLKKL 174 (313)
T ss_dssp HHHTTCSEEEEEESCTTTCSHHHHHHHHHHHSSSCEEEEECSCCGGGTHHHHHHHHHHHHTTC---CHHHHHHHH
T ss_pred HHHcCCCeEEEEECCccHhHHHHHHHHHHhcCCCeEEEEeCCcchHHHHHHHHHHHHHHhcCC---CHHHHHHHH
Confidence 33568889999988876544 3556655543 5789999888888765555444555555554 455555443
No 169
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=28.92 E-value=80 Score=22.46 Aligned_cols=40 Identities=3% Similarity=0.024 Sum_probs=34.8
Q ss_pred EEEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++. ..|++.....++.++++.+.++..|+.||.+..
T Consensus 33 ~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~ 73 (192)
T 2h01_A 33 YVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSV 73 (192)
T ss_dssp EEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEES
T ss_pred eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEe
Confidence 5788898 889998888999999999999888988888864
No 170
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=28.87 E-value=2.6e+02 Score=23.54 Aligned_cols=65 Identities=14% Similarity=-0.083 Sum_probs=44.1
Q ss_pred HHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC---CCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 125 RLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA---TATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 125 ~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da---~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.+.....++++|+|----. ...|..+...|.+|+++.-. ....+++..+...+.++..+.++...
T Consensus 145 ~~~~~~~~~vvViGgG~~g--~e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~ 212 (565)
T 3ntd_A 145 TIQMNNVEHATVVGGGFIG--LEMMESLHHLGIKTTLLELADQVMTPVDREMAGFAHQAIRDQGVDLRLG 212 (565)
T ss_dssp HHHHTTCSEEEEECCSHHH--HHHHHHHHHTTCEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEET
T ss_pred HHhhCCCCEEEEECCCHHH--HHHHHHHHhcCCcEEEEEcCCccchhcCHHHHHHHHHHHHHCCCEEEeC
Confidence 3344556789998854333 34455677889999998643 23456777777778888888877654
No 171
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=28.78 E-value=66 Score=23.63 Aligned_cols=40 Identities=8% Similarity=-0.053 Sum_probs=34.1
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|+....+|++.....+.++++.+.....|+.||.+..
T Consensus 49 ~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~ 88 (208)
T 2f8a_A 49 VLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPC 88 (208)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEEC
Confidence 5788888999998888889999999999888888888753
No 172
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=28.76 E-value=96 Score=23.61 Aligned_cols=77 Identities=10% Similarity=0.040 Sum_probs=47.4
Q ss_pred CCchHHHHHhCCCcEEEEeeccCchhH---------HHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEe
Q 028963 119 NTRLQERLVGMGVEEVIVCGVMTNLCC---------ETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~~T~~CV---------~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~ 189 (201)
+....+.|++.|...+.-.--..|..+ ...+......| .|++.-|.. ..+.+.....+..++..|-+++
T Consensus 159 ~~~~~~~l~~~G~~~v~wsvd~~Dw~~~~~~~~~~~~~~v~~~~~~G-~IiL~Hd~~-~~t~~aL~~ii~~l~~~Gy~fv 236 (247)
T 2j13_A 159 SERTLALTKEMGYYNVFWSLAFLDWKVDEQRGWQYAHNNVMTMIHPG-SILLLHAIS-KDNAEALAKIIDDLREKGYHFK 236 (247)
T ss_dssp CHHHHHHHHHTTCEEECCSEECCCC------------------CCTT-BEEEECCCS-TTHHHHHHHHHHHHHHTTCEEE
T ss_pred CHHHHHHHHHCCCEEEecCcccCcCCCCCCCCHHHHHHHHHHhcCCC-eEEEEeCCc-HhHHHHHHHHHHHHHHCCCEEE
Confidence 457778899999876542222222221 12222223334 577777743 3346778889999999999999
Q ss_pred eHHHHHHh
Q 028963 190 DCERLEAG 197 (201)
Q Consensus 190 ~~~e~~~~ 197 (201)
+.+|++..
T Consensus 237 tl~ell~~ 244 (247)
T 2j13_A 237 SLDDLVKS 244 (247)
T ss_dssp CHHHHHHT
T ss_pred EhHHhhcc
Confidence 99999864
No 173
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=28.76 E-value=1.5e+02 Score=22.01 Aligned_cols=25 Identities=16% Similarity=0.256 Sum_probs=12.4
Q ss_pred CCCCCCCCchHHHHHhCCCcEEEEee
Q 028963 113 TYSAFGNTRLQERLVGMGVEEVIVCG 138 (201)
Q Consensus 113 ~~saf~~t~L~~~L~~~gi~~lvi~G 138 (201)
+-+.+-+..+...|.+.|. +|++++
T Consensus 21 GasggiG~~la~~l~~~G~-~V~~~~ 45 (266)
T 1xq1_A 21 GGTKGIGHAIVEEFAGFGA-VIHTCA 45 (266)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEe
Confidence 3344444555566665554 344444
No 174
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=28.74 E-value=1.6e+02 Score=22.19 Aligned_cols=17 Identities=24% Similarity=0.171 Sum_probs=8.4
Q ss_pred CCCCCCchHHHHHhCCC
Q 028963 115 SAFGNTRLQERLVGMGV 131 (201)
Q Consensus 115 saf~~t~L~~~L~~~gi 131 (201)
+.+-+..+...|.+.|.
T Consensus 41 sggIG~~la~~l~~~G~ 57 (279)
T 1xg5_A 41 SGGIGAAVARALVQQGL 57 (279)
T ss_dssp TSHHHHHHHHHHHHTTC
T ss_pred CchHHHHHHHHHHHCCC
Confidence 33434455555555554
No 175
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=28.55 E-value=1.9e+02 Score=23.59 Aligned_cols=50 Identities=10% Similarity=-0.142 Sum_probs=32.2
Q ss_pred EEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 134 VIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 134 lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
-||++-+.|.+. ++|..+..+|++++++-....+ + .-+..++..|++|+-
T Consensus 114 ~vv~aSsGNhg~-a~A~aa~~~G~~~~iv~p~~~~--~----~k~~~~~~~GA~Vv~ 163 (398)
T 4d9i_A 114 TFATTTDGNHGR-GVAWAAQQLGQNAVIYMPKGSA--Q----ERVDAILNLGAECIV 163 (398)
T ss_dssp EEEEECSSHHHH-HHHHHHHHHTCEEEEEECTTCC--H----HHHHHHHTTTCEEEE
T ss_pred EEEEECCCHHHH-HHHHHHHHcCCCEEEEEeCCCC--H----HHHHHHHHcCCEEEE
Confidence 566677777776 6677788889998777654322 1 234455566777653
No 176
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=28.55 E-value=2.3e+02 Score=22.78 Aligned_cols=64 Identities=8% Similarity=0.107 Sum_probs=37.9
Q ss_pred CchHHHHHhCCCcE-EEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcc
Q 028963 120 TRLQERLVGMGVEE-VIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGF 185 (201)
Q Consensus 120 t~L~~~L~~~gi~~-lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~ 185 (201)
..|.+++++.|.++ ++|+|-.. .-....+.+.++. ..+.+..+.....+.+.-+.+++.++..+
T Consensus 23 ~~l~~~l~~~g~~r~liVtd~~~-~~~~~~v~~~L~~-~~~~v~~~v~~~p~~~~v~~~~~~~~~~~ 87 (353)
T 3hl0_A 23 ADVAEEIRRLGLSRALVLSTPQQ-KGDAEALASRLGR-LAAGVFSEAAMHTPVEVTKTAVEAYRAAG 87 (353)
T ss_dssp GGHHHHHHHTTCCCEEEECCGGG-HHHHHHHHHHHGG-GEEEEECCCCTTCBHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCEEEEEecCch-hhHHHHHHHHHhh-CCcEEecCcCCCCcHHHHHHHHHHHhccC
Confidence 36788888888655 45555443 3345555555553 34455566555556666677777766543
No 177
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=28.54 E-value=1.1e+02 Score=22.82 Aligned_cols=30 Identities=17% Similarity=0.122 Sum_probs=15.0
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|.... -=.+.|+.+.++|++|+++
T Consensus 13 k~vlVTGas~g-IG~aia~~l~~~G~~V~~~ 42 (252)
T 3f1l_A 13 RIILVTGASDG-IGREAAMTYARYGATVILL 42 (252)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCCh-HHHHHHHHHHHCCCEEEEE
Confidence 45555554432 2234555555556655543
No 178
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=28.53 E-value=74 Score=26.48 Aligned_cols=46 Identities=20% Similarity=0.247 Sum_probs=32.0
Q ss_pred CeEEEEEeccCccCCC--c-------hhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 23 SSVLLVIDMQNHFSSI--A-------KPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~--~-------~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
+.-|||||.-..+... . ..+..-...|-..|++.++|||.+.+.++
T Consensus 310 ~~~lIvID~l~~~~~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~lsql~r 364 (444)
T 2q6t_A 310 QVGLIIIDYLQLMSGPGSGKSGENRQQEIAAISRGLKALARELGIPIIALSQLSR 364 (444)
T ss_dssp CCCEEEEECGGGCBCC-------CHHHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CCCEEEEcChhhcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEecCCc
Confidence 4569999998877643 1 12334445566678999999999988654
No 179
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=28.52 E-value=68 Score=24.59 Aligned_cols=30 Identities=27% Similarity=0.268 Sum_probs=21.9
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|-+..+. .++|+...+.|++|++.
T Consensus 3 K~vlVTGas~GIG-~aia~~la~~Ga~V~~~ 32 (247)
T 3ged_A 3 RGVIVTGGGHGIG-KQICLDFLEAGDKVCFI 32 (247)
T ss_dssp CEEEEESTTSHHH-HHHHHHHHHTTCEEEEE
T ss_pred CEEEEecCCCHHH-HHHHHHHHHCCCEEEEE
Confidence 5778888776544 67788888888887765
No 180
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=28.46 E-value=2.3e+02 Score=22.66 Aligned_cols=103 Identities=12% Similarity=-0.058 Sum_probs=58.8
Q ss_pred ccccccccCCCCCCCEEEECCCCCCCCCC----chHHHHHhCC---CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 92 AELLPEIKGLVAGADEVIEKNTYSAFGNT----RLQERLVGMG---VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 92 ~~~~~~l~~~~~~~~~vv~K~~~saf~~t----~L~~~L~~~g---i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
...+.+++. ...-+||+-.. +-++.| +|--+.+..| --+|.++|-. +.-+.+-+..+...|.++.++.-
T Consensus 112 ~~~~~~lA~--~~~vPVINa~~-~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~-~rva~Sl~~~~~~~g~~v~~~~P 187 (315)
T 1pvv_A 112 HKDVEDLAK--YATVPVINGLS-DFSHPCQALADYMTIWEKKGTIKGVKVVYVGDG-NNVAHSLMIAGTKLGADVVVATP 187 (315)
T ss_dssp HHHHHHHHH--HCSSCEEEEEC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCC-CHHHHHHHHHHHHTTCEEEEECC
T ss_pred hHHHHHHHH--hCCCCEEcCCC-CCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCC-cchHHHHHHHHHHCCCEEEEECC
Confidence 334455554 34455666322 333332 2322333333 3578889987 66667777788889999999988
Q ss_pred CCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 165 ATATSDLELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 165 a~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
..-..+++..+.+-+..+..|+.+.-+.++-+++
T Consensus 188 ~~~~~~~~~~~~~~~~a~~~g~~~~~~~d~~eav 221 (315)
T 1pvv_A 188 EGYEPDEKVIKWAEQNAAESGGSFELLHDPVKAV 221 (315)
T ss_dssp TTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHT
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEEEeCHHHHh
Confidence 7766666554444444445565554444444333
No 181
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=28.37 E-value=1.8e+02 Score=21.70 Aligned_cols=30 Identities=17% Similarity=0.010 Sum_probs=15.0
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... .-=.+.++.+.++|++|+++
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 37 (262)
T 1zem_A 8 KVCLVTGAGG-NIGLATALRLAEEGTAIALL 37 (262)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3555555533 23344555555556655544
No 182
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=28.20 E-value=1.9e+02 Score=21.94 Aligned_cols=26 Identities=23% Similarity=0.271 Sum_probs=13.1
Q ss_pred CCCCCCCCchHHHHHhCCCcEEEEeec
Q 028963 113 TYSAFGNTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 113 ~~saf~~t~L~~~L~~~gi~~lvi~G~ 139 (201)
+-+.+-+..+...|.+.|. +|++++-
T Consensus 29 Gas~gIG~~ia~~l~~~G~-~V~~~~r 54 (277)
T 2rhc_B 29 GATSGIGLEIARRLGKEGL-RVFVCAR 54 (277)
T ss_dssp TCSSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 3344444556666666664 3444443
No 183
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=28.18 E-value=60 Score=22.55 Aligned_cols=39 Identities=5% Similarity=-0.056 Sum_probs=33.0
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+... .++.++++.+..+..|+.||.+..
T Consensus 34 ~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~ 72 (171)
T 3cmi_A 34 VVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPC 72 (171)
T ss_dssp EEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred EEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEEC
Confidence 577788889998888 999999999999888888888753
No 184
>1oj7_A Hypothetical oxidoreductase YQHD; structural genomics; HET: NZQ; 2.0A {Escherichia coli} SCOP: e.22.1.2
Probab=28.15 E-value=1.3e+02 Score=24.63 Aligned_cols=76 Identities=16% Similarity=0.100 Sum_probs=49.2
Q ss_pred CchHHHHHhCCCcEEEEeecc--CchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhc---------ceEE
Q 028963 120 TRLQERLVGMGVEEVIVCGVM--TNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYG---------FAYL 188 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~--T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~---------~~~v 188 (201)
..|.+.++ .|-+-++|+|-. ........+.+.++ |+++.+..+.....+.+.-+.+++.++.. |+.+
T Consensus 41 ~~l~~~l~-~g~r~liVtd~~~~~~~g~~~~v~~~L~-g~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~IIavGGGsv 118 (408)
T 1oj7_A 41 AGLREQIP-HDARVLITYGGGSVKKTGVLDQVLDALK-GMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSV 118 (408)
T ss_dssp GGHHHHSC-TTCEEEEEECSSHHHHHSHHHHHHHHTT-TSEEEEECCCCSSCBHHHHHHHHHHHHHHTCCEEEEEESHHH
T ss_pred HHHHHHHh-cCCEEEEEECCchhhhccHHHHHHHHhC-CCEEEEeCCcCCCcCHHHHHHHHHHHHHcCCCEEEEeCCchH
Confidence 35667776 674455555432 22336677778887 99998888887777777777777777643 4445
Q ss_pred eeHHHHHHh
Q 028963 189 FDCERLEAG 197 (201)
Q Consensus 189 ~~~~e~~~~ 197 (201)
+++.-+++.
T Consensus 119 iD~AK~iA~ 127 (408)
T 1oj7_A 119 LDGTKFIAA 127 (408)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555544
No 185
>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10
Probab=28.12 E-value=62 Score=24.79 Aligned_cols=40 Identities=20% Similarity=0.252 Sum_probs=31.6
Q ss_pred EEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 25 VLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 25 aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
-||+.|+=.-+++....+-+...+.++.+++.|++++.+.
T Consensus 6 kli~~DlDGTLl~~~~~i~~~~~~aL~~l~~~Gi~vviaT 45 (282)
T 1rkq_A 6 KLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTT 45 (282)
T ss_dssp CEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred eEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc
Confidence 3899999998887655566677778888889999877765
No 186
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.05 E-value=1.5e+02 Score=22.50 Aligned_cols=30 Identities=27% Similarity=0.139 Sum_probs=15.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... .-=.+.++.+.++|++|+++
T Consensus 7 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 36 (280)
T 1xkq_A 7 KTVIITGSSN-GIGRTTAILFAQEGANVTIT 36 (280)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 4556666432 33345555555666665554
No 187
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=28.04 E-value=71 Score=22.47 Aligned_cols=40 Identities=0% Similarity=-0.072 Sum_probs=33.7
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+.....++.++++.+.....++.|+.+..
T Consensus 49 ~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~ 88 (183)
T 2obi_A 49 VCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPC 88 (183)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred EEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEEC
Confidence 5778888899988888899999999999888888888753
No 188
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=27.95 E-value=81 Score=22.55 Aligned_cols=40 Identities=8% Similarity=-0.040 Sum_probs=34.9
Q ss_pred EEEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++. ..+|+......+.+.++.+..+..++.||.+..
T Consensus 35 ~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 75 (198)
T 1zof_A 35 GVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSI 75 (198)
T ss_dssp EEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEES
T ss_pred cEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEEC
Confidence 6888999 789998888999999999999888888888864
No 189
>2zkq_b 40S ribosomal protein SA; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=27.93 E-value=56 Score=26.06 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=27.7
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCC
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSP 70 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~ 70 (201)
.+|+|+|...+. ..+..|+..|+|||-..+.+.+|
T Consensus 120 dlliV~Dp~~e~------------~AI~EA~~lgIPvIalvDTn~dp 154 (295)
T 2zkq_b 120 RLLVVTDPRADH------------QPLTEASYVNLPTIALCNTDSPL 154 (295)
T ss_dssp SEEEESCTTTTH------------HHHHHHHHHTCCEEEEECTTCCC
T ss_pred CeEEEeCCCcch------------hHHHHHHHhCCCEEEEecCCCCc
Confidence 378889987753 45678889999999999887655
No 190
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=27.89 E-value=1.9e+02 Score=21.70 Aligned_cols=30 Identities=10% Similarity=0.077 Sum_probs=19.9
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|.... -=.+.++.+.++|++|+++
T Consensus 14 k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~ 43 (278)
T 3sx2_A 14 KVAFITGAARG-QGRAHAVRLAADGADIIAV 43 (278)
T ss_dssp CEEEEESTTSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCh-HHHHHHHHHHHCCCeEEEE
Confidence 56777776543 3356677777778777665
No 191
>1z2i_A Malate dehydrogenase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; HET: NAD; 2.20A {Agrobacterium tumefaciens}
Probab=27.75 E-value=53 Score=26.95 Aligned_cols=45 Identities=11% Similarity=0.137 Sum_probs=35.6
Q ss_pred CCeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 22 KSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
...++++||-+++|-. -.....+..+++.||++|+-++.+++.+.
T Consensus 81 ~~~a~~~vDg~~g~G~--~~~~~am~~aiekAk~~Gi~~v~vrns~H 125 (358)
T 1z2i_A 81 GFGAVETIDADHAHGA--RATYAAMENAMALAEKFGIGAVAIRNSSH 125 (358)
T ss_dssp CCTTEEEEECSSCCHH--HHHHHHHHHHHHHHHHHSEEEEEEEEECC
T ss_pred cCCcEEEEECCCCcHH--HHHHHHHHHHHHHHHHcCEEEEEEeCCCC
Confidence 4568899999998842 22455677889999999999999988765
No 192
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=27.71 E-value=1.9e+02 Score=23.61 Aligned_cols=62 Identities=10% Similarity=0.020 Sum_probs=29.9
Q ss_pred chHHHHHhCCCcEEEEeec--cCchh--HHHHHHHHHhCCCeEEEecCCCCCC--CHHHHHHHHHHHh
Q 028963 121 RLQERLVGMGVEEVIVCGV--MTNLC--CETTARDAFVRGFRVFFSTDATATS--DLELHEATLKNLA 182 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~G~--~T~~C--V~~Ta~~a~~~G~~v~vv~Da~~~~--~~~~h~~al~~l~ 182 (201)
++.+.|+++|++-.++++- .+... ........+..-|+.++.++-+... +++....+++.+.
T Consensus 107 ~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~lg 174 (555)
T 3i28_A 107 QAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLK 174 (555)
T ss_dssp HHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEeccccCCCCCCHHHHHHHHHHcC
Confidence 3444566677766666664 11111 1111112334446666665544432 4555666666553
No 193
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=27.64 E-value=2.4e+02 Score=22.66 Aligned_cols=66 Identities=9% Similarity=-0.009 Sum_probs=43.4
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHh
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAG 197 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~ 197 (201)
-+|.++|-.-+.-+.+-+..+...|.+|.++.--.-..+++..+.+-+..+..|+.+.-+.++-++
T Consensus 168 l~va~vGD~~~rva~Sl~~~~~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~ea 233 (325)
T 1vlv_A 168 VKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFKRCQEIVKETDGSVSFTSNLEEA 233 (325)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEESCHHHH
T ss_pred cEEEEECCCCcCcHHHHHHHHHHCCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEcCHHHH
Confidence 478899985356667777777889999999887666666655444444444556555444444333
No 194
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=27.49 E-value=53 Score=21.88 Aligned_cols=40 Identities=8% Similarity=0.028 Sum_probs=33.4
Q ss_pred EEEEeccCccCCCchhHHHHHHH---HHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLA---TVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~---l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|++.....+.+.+ +.+..+..++.||.+..
T Consensus 33 ~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~ 75 (142)
T 3eur_A 33 YTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYP 75 (142)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEEC
T ss_pred EEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEc
Confidence 57888888888888888999999 89988888888888754
No 195
>3j20_B 30S ribosomal protein S2P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=27.48 E-value=74 Score=23.85 Aligned_cols=35 Identities=17% Similarity=0.215 Sum_probs=27.1
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCC
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSP 70 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~ 70 (201)
.+|+|+|...+. ..+..|+..|+|||...+.+.+|
T Consensus 113 dllvv~Dp~~d~------------~ai~EA~~l~IP~Ial~DTn~~p 147 (202)
T 3j20_B 113 DVLIVTDPRADH------------QAMREAVEIGIPIVALVDTENLL 147 (202)
T ss_dssp SEEEESCTTTSH------------HHHHHHHHHTCCEEEEECTTCCC
T ss_pred CeEEEeCCccch------------HHHHHHHHcCCCEEEEEcCCCCc
Confidence 378889887753 45667888999999998877655
No 196
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=27.46 E-value=1.3e+02 Score=24.38 Aligned_cols=59 Identities=8% Similarity=-0.166 Sum_probs=41.1
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCC----CCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATA----TSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~----~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
-++++|+|--.-. ...|..+.++|.+|++++-.-. ..+++..+...+.++..+.++...
T Consensus 146 ~~~vvVIGgG~~g--~E~A~~l~~~g~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~~gV~~~~~ 208 (385)
T 3klj_A 146 KGKAFIIGGGILG--IELAQAIIDSGTPASIGIILEYPLERQLDRDGGLFLKDKLDRLGIKIYTN 208 (385)
T ss_dssp HSCEEEECCSHHH--HHHHHHHHHHTCCEEEECSSSSSCTTTSCHHHHHHHHHHHHTTTCEEECS
T ss_pred CCeEEEECCCHHH--HHHHHHHHhCCCeEEEEEcCCccchhhcCHHHHHHHHHHHHhCCCEEEeC
Confidence 3578888754333 3456667778999999865432 256777788888888888888764
No 197
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=27.45 E-value=1.6e+02 Score=22.44 Aligned_cols=56 Identities=7% Similarity=0.088 Sum_probs=45.4
Q ss_pred EECCCCCCCCCCchHHHHHhCCCcEEEEee-------ccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 109 IEKNTYSAFGNTRLQERLVGMGVEEVIVCG-------VMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 109 v~K~~~saf~~t~L~~~L~~~gi~~lvi~G-------~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
+.....++|++.--.+.|++.|++.++|-= -.||.-|..-+..|.+.|..+++...
T Consensus 60 ~~~~~~GAfTGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvG 122 (233)
T 2jgq_A 60 AYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIG 122 (233)
T ss_dssp CBSSSSBSCTTCCBHHHHHHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCCCccCccCHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcC
Confidence 334567899998889999999999887742 26788899999999999999998443
No 198
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=27.44 E-value=1.1e+02 Score=22.00 Aligned_cols=48 Identities=6% Similarity=0.021 Sum_probs=34.6
Q ss_pred CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHH-hCCCeEEEecCCCC
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAF-VRGFRVFFSTDATA 167 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~-~~G~~v~vv~Da~~ 167 (201)
.++...++..+++.++|+|-+.-..+...+.... -.-.+-.|+.+...
T Consensus 75 ~~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 75 QDLLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp HHHHHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred HHHHHHHHhcCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 4677888889999999999999888766555444 33456555655554
No 199
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=27.44 E-value=2.6e+02 Score=22.96 Aligned_cols=59 Identities=14% Similarity=-0.064 Sum_probs=41.1
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC---CCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA---TATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da---~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|--.-.| ..|..+.++|.+|++++-. ....+++..+...+.++..+.++...
T Consensus 167 ~~~vvViGgG~~g~--e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~ 228 (450)
T 1ges_A 167 PERVAVVGAGYIGV--ELGGVINGLGAKTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTN 228 (450)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECS
T ss_pred CCeEEEECCCHHHH--HHHHHHHhcCCEEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeC
Confidence 57888888654333 4455667789999999754 33457777777778887777776654
No 200
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=27.42 E-value=1.2e+02 Score=22.76 Aligned_cols=30 Identities=20% Similarity=0.304 Sum_probs=19.1
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|....+. .+.++.+.++|++|+++
T Consensus 8 k~~lVTGas~GIG-~aia~~l~~~G~~V~~~ 37 (250)
T 3nyw_A 8 GLAIITGASQGIG-AVIAAGLATDGYRVVLI 37 (250)
T ss_dssp CEEEEESTTSHHH-HHHHHHHHHHTCEEEEE
T ss_pred CEEEEECCCcHHH-HHHHHHHHHCCCEEEEE
Confidence 5667777665443 56666666777777665
No 201
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=27.40 E-value=2.6e+02 Score=23.01 Aligned_cols=59 Identities=14% Similarity=-0.124 Sum_probs=41.2
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCC----CCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATA----TSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~----~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|--.-.| ..|..+.++|.+|++++-.-. ..+++..+...+.++..+.++...
T Consensus 178 ~~~vvViGgG~~g~--E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~ 240 (474)
T 1zmd_A 178 PEKMVVIGAGVIGV--ELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLN 240 (474)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHHTTCEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECS
T ss_pred CceEEEECCCHHHH--HHHHHHHHcCCEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeC
Confidence 37898888543333 445566778999999975432 457777788888888887776643
No 202
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=27.35 E-value=74 Score=24.85 Aligned_cols=31 Identities=23% Similarity=0.220 Sum_probs=23.6
Q ss_pred cEEEEeecc-CchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVM-TNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~-T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|.. +..-=.++++.+.++|++|+++
T Consensus 10 k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~ 41 (315)
T 2o2s_A 10 QTAFVAGVADSHGYGWAIAKHLASAGARVALG 41 (315)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHTTTCEEEEE
T ss_pred CEEEEeCCCCCCChHHHHHHHHHHCCCEEEEE
Confidence 578888874 6666677888888888888776
No 203
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=27.34 E-value=1.1e+02 Score=21.57 Aligned_cols=41 Identities=2% Similarity=0.161 Sum_probs=34.9
Q ss_pred EEEEEeccCccCCCchhH-HHHHHHHHHHHHHCCCc-EEEEec
Q 028963 25 VLLVIDMQNHFSSIAKPI-LDNTLATVQLCRRASIP-VFFTRH 65 (201)
Q Consensus 25 aLlviD~Q~~f~~~~~~~-i~~i~~l~~~ar~~g~~-vi~~~~ 65 (201)
-++++.+...|++....- ++.++++.+.+++.|+. |+.+..
T Consensus 45 ~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~ 87 (171)
T 2pwj_A 45 KVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAI 87 (171)
T ss_dssp EEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEES
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeC
Confidence 367888999999988877 89999999999999999 887753
No 204
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=27.33 E-value=79 Score=22.57 Aligned_cols=40 Identities=5% Similarity=-0.055 Sum_probs=34.8
Q ss_pred EEEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++. ..+|+.....++.+.++.+..+..++.||.+..
T Consensus 47 ~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~ 87 (195)
T 2bmx_A 47 WRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSI 87 (195)
T ss_dssp EEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEES
T ss_pred cEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 6788999 899998888999999999998888888888864
No 205
>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}
Probab=27.29 E-value=58 Score=24.88 Aligned_cols=46 Identities=13% Similarity=0.075 Sum_probs=34.6
Q ss_pred CCCCCeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 19 PNPKSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 19 ~~~~~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
...++.=||+.|+=.-+++....+.+...+.++.+++.|+.++.+.
T Consensus 16 ~~~~~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~iaT 61 (285)
T 3pgv_A 16 YFQGMYQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFAT 61 (285)
T ss_dssp -----CCEEEEECCCCCSCTTSCCCHHHHHHHHHHHTTTCEEEEEC
T ss_pred cccCcceEEEEeCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc
Confidence 3444556999999999988766777888888888999999888774
No 206
>3kty_A Probable methyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 2.30A {Bordetella pertussis}
Probab=27.27 E-value=1.6e+02 Score=20.97 Aligned_cols=65 Identities=17% Similarity=0.083 Sum_probs=44.5
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCC-eEEEecCCCCC--CCHHHHHHH---HHHHhhcceEEe-eHHHHHHhh
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGF-RVFFSTDATAT--SDLELHEAT---LKNLAYGFAYLF-DCERLEAGL 198 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~-~v~vv~Da~~~--~~~~~h~~a---l~~l~~~~~~v~-~~~e~~~~l 198 (201)
-.|++.++....=+-+-+|.+...|+ .++++...+.+ .++...+.+ +..+.. ..+. +.+++++.+
T Consensus 11 ~~vvL~~~~dp~N~Gai~Rta~a~G~~~l~lv~~~~~d~~~~~~~~r~a~Ga~~~l~~--~~~~~~l~~~l~~~ 82 (173)
T 3kty_A 11 VRFIMTQPSHPGNVGSAARAIKTMGFGELVLVAPRFPDMTAQPEAVALASGALDVLER--AAVHDTLEEALAPV 82 (173)
T ss_dssp EEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCSSTTGGGSHHHHHHHTTCHHHHHT--CEEESCHHHHHTTC
T ss_pred eEEEEeCCCCCCcHHHHHHHHHHcCCCEEEEeCCCccccCCCHHHHHHcCCHHHhhch--heecCCHHHHHHhC
Confidence 47899999999999999999999998 67777777664 355555444 333331 2333 566666554
No 207
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=27.27 E-value=2.6e+02 Score=23.01 Aligned_cols=59 Identities=12% Similarity=-0.104 Sum_probs=40.4
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC---CCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT---ATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~---~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|--.-.| ..|..+.++|.+|++++-.- ...+++..+...+.++..+.++...
T Consensus 169 ~~~vvViGgG~~g~--e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~ 230 (464)
T 2eq6_A 169 PKRLLVIGGGAVGL--ELGQVYRRLGAEVTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTK 230 (464)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCEEEEECCCHHHH--HHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcC
Confidence 47888888554333 34566677899999997542 3456777777777787777776543
No 208
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=27.21 E-value=2.4e+02 Score=22.50 Aligned_cols=63 Identities=16% Similarity=0.084 Sum_probs=40.1
Q ss_pred CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcce
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFA 186 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~ 186 (201)
+++++.|....++-|+|+- .+..-..-++.|+++|..|++=.=. +.+.+..+..++..+..+.
T Consensus 57 ~~~~~ll~~~~~D~V~i~t--p~~~H~~~~~~al~aGk~Vl~EKPl--a~~~~e~~~l~~~a~~~g~ 119 (364)
T 3e82_A 57 ASPEAAVQHPDVDLVVIAS--PNATHAPLARLALNAGKHVVVDKPF--TLDMQEARELIALAEEKQR 119 (364)
T ss_dssp SCHHHHHTCTTCSEEEECS--CGGGHHHHHHHHHHTTCEEEECSCS--CSSHHHHHHHHHHHHHTTC
T ss_pred CCHHHHhcCCCCCEEEEeC--ChHHHHHHHHHHHHCCCcEEEeCCC--cCCHHHHHHHHHHHHHhCC
Confidence 5788999888899998884 3344456678899999887653222 2344444444444444443
No 209
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=27.14 E-value=59 Score=21.51 Aligned_cols=40 Identities=3% Similarity=-0.018 Sum_probs=32.6
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHH-HHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLC-RRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~a-r~~g~~vi~~~~ 65 (201)
.++|++...+|+......+.+.++.+.. ...++.++.+..
T Consensus 35 ~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~ 75 (148)
T 3fkf_A 35 YLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISL 75 (148)
T ss_dssp EEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEEC
T ss_pred EEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEEC
Confidence 6788888999999888999999998887 666777777753
No 210
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=27.11 E-value=2.6e+02 Score=22.84 Aligned_cols=60 Identities=15% Similarity=0.014 Sum_probs=41.7
Q ss_pred CCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC---C-CCCHHHHHHHHHHHhhcceEEeeH
Q 028963 130 GVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT---A-TSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 130 gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~---~-~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
..++++|.|--.-.| ..|..+.++|.+|++++..- . ..+++..+...+.++..+.++...
T Consensus 148 ~~~~vvIiG~G~~g~--e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~gv~i~~~ 211 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGI--EAAEAFAKAGKKVTVIDILDRPLGVYLDKEFTDVLTEEMEANNITIATG 211 (447)
T ss_dssp TCCEEEEECCSHHHH--HHHHHHHHTTCEEEEEESSSSTTTTTCCHHHHHHHHHHHHTTTEEEEES
T ss_pred CCCeEEEECCCHHHH--HHHHHHHHCCCeEEEEecCcccccccCCHHHHHHHHHHHHhCCCEEEcC
Confidence 457888888654433 34556677899999997542 2 356777778888888888777653
No 211
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=27.08 E-value=80 Score=23.49 Aligned_cols=40 Identities=0% Similarity=-0.056 Sum_probs=34.5
Q ss_pred EEEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|.+. ..|++.....++.++++.+.+++.|+.||.+..
T Consensus 58 ~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~ 98 (221)
T 2c0d_A 58 YCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISV 98 (221)
T ss_dssp EEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEES
T ss_pred eEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4788888 889988888899999999999888998888864
No 212
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A*
Probab=27.07 E-value=51 Score=26.52 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=31.6
Q ss_pred hHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEec
Q 028963 122 LQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFST 163 (201)
Q Consensus 122 L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~ 163 (201)
..+.|++.+|+-+++.|-.-. ..+|....+.|++|+-+.
T Consensus 85 ~~~~l~~~~Id~L~~IGGdgS---~~~a~~l~~~~i~vigiP 123 (319)
T 4a3s_A 85 GIANLKKLGIEGLVVIGGDGS---YMGAKKLTEHGFPCVGVP 123 (319)
T ss_dssp HHHHHHHHTCCEEEEEECTTH---HHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHcCCCEEEEeCCcHH---HHHHHHHhccCCcEEEee
Confidence 566788999999999998765 467888888999887664
No 213
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=27.06 E-value=1.6e+02 Score=22.93 Aligned_cols=30 Identities=27% Similarity=0.204 Sum_probs=13.7
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|.... ==.+.|+.+.++|++|+++
T Consensus 28 k~vlVTGas~G-IG~aia~~la~~G~~Vv~~ 57 (322)
T 3qlj_A 28 RVVIVTGAGGG-IGRAHALAFAAEGARVVVN 57 (322)
T ss_dssp CEEEETTTTSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCcH-HHHHHHHHHHHCCCEEEEE
Confidence 34555554422 2234444555555555444
No 214
>2xzm_B RPS0E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_B
Probab=26.98 E-value=57 Score=25.21 Aligned_cols=35 Identities=23% Similarity=0.343 Sum_probs=27.1
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCC
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSP 70 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~ 70 (201)
.+|+|+|...+. ..+..|+..|+|||...+.+.+|
T Consensus 116 dlliV~Dp~~e~------------~ai~EA~~l~IPvIalvDTn~~p 150 (241)
T 2xzm_B 116 RVLIVTDPRSDF------------QAIKEASYVNIPVIALCDSDSPL 150 (241)
T ss_dssp SEEEESCTTTTH------------HHHHHHTTTTCCEEECCCSSSCC
T ss_pred CEEEEECCCcch------------HHHHHHHHhCCCEEEEecCCCCc
Confidence 388899987652 35667888999999999876654
No 215
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=26.90 E-value=46 Score=22.75 Aligned_cols=40 Identities=5% Similarity=-0.004 Sum_probs=33.4
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+......+.+.++.+..+..|+.++.+..
T Consensus 37 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~ 76 (152)
T 2lrt_A 37 VVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISL 76 (152)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred EEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEc
Confidence 5788888888888888899999999999888888887754
No 216
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=26.85 E-value=2e+02 Score=23.62 Aligned_cols=50 Identities=12% Similarity=-0.025 Sum_probs=35.4
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEe
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~ 189 (201)
..|+.+-+.|.++ ++|..+..+|++++++-.... ++ ..+..|+..|++|+
T Consensus 146 ~~Iv~assGNhG~-AlA~aaa~~Gl~~~ivmp~~~--~~----~k~~~~~~~GAeVv 195 (389)
T 1wkv_A 146 SLVADATSSNFGV-ALSAVARLYGYRARVYLPGAA--EE----FGKLLPRLLGAQVI 195 (389)
T ss_dssp CEEEEECCHHHHH-HHHHHHHHTTCEEEEEEETTS--CH----HHHHHHHHTTCEEE
T ss_pred CEEEEECCcHHHH-HHHHHHHHcCCeEEEEECCCC--CH----HHHHHHHHcCCEEE
Confidence 5566777777777 678888899999888765543 22 23456777888888
No 217
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=26.82 E-value=2.7e+02 Score=22.97 Aligned_cols=59 Identities=14% Similarity=-0.179 Sum_probs=41.1
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC---CCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA---TATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da---~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|----.| ..|..+.++|.+|+++... ....+++..+...+.++..+.++...
T Consensus 166 ~~~vvVvGgG~~g~--e~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 227 (463)
T 2r9z_A 166 PKRVAIIGAGYIGI--ELAGLLRSFGSEVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLE 227 (463)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESS
T ss_pred CCEEEEECCCHHHH--HHHHHHHhcCCEEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 57899888654433 3455667789999999754 23457777777777788777776543
No 218
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=26.79 E-value=73 Score=24.79 Aligned_cols=30 Identities=20% Similarity=0.129 Sum_probs=12.7
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|....+ =.+.++.+.++|++|+++
T Consensus 42 k~vlVTGas~GI-G~aia~~la~~G~~V~~~ 71 (293)
T 3rih_A 42 RSVLVTGGTKGI-GRGIATVFARAGANVAVA 71 (293)
T ss_dssp CEEEETTTTSHH-HHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCcHH-HHHHHHHHHHCCCEEEEE
Confidence 344444443322 233444444445544443
No 219
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=26.74 E-value=64 Score=26.23 Aligned_cols=47 Identities=9% Similarity=0.121 Sum_probs=31.1
Q ss_pred CeEEEEEeccCccCCCc---------------hhHHHHHHHHHHHHHHCCCcEEEEecccCC
Q 028963 23 SSVLLVIDMQNHFSSIA---------------KPILDNTLATVQLCRRASIPVFFTRHCHKS 69 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~---------------~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~ 69 (201)
+.-+||||.-..+.... +.+...+.+|...+++.+++||++.+....
T Consensus 141 ~~~lVVIDsl~~l~~~~e~~~~~g~~~~~~q~r~~~~~l~~L~~~a~~~~~~VI~~nq~~~~ 202 (356)
T 1u94_A 141 AVDVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMK 202 (356)
T ss_dssp CCSEEEEECGGGCCCHHHHTTC------CHHHHHHHHHHHHHHHHHHHHTCEEEEEEC----
T ss_pred CCCEEEEcCHHHhcchhhhccccccchhHHHHHHHHHHHHHHHHHHHHhCCEEEEEeccccc
Confidence 45699999877765311 123455667777889999999999887653
No 220
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=26.69 E-value=1.6e+02 Score=22.20 Aligned_cols=15 Identities=13% Similarity=0.018 Sum_probs=7.7
Q ss_pred CCCCchHHHHHhCCC
Q 028963 117 FGNTRLQERLVGMGV 131 (201)
Q Consensus 117 f~~t~L~~~L~~~gi 131 (201)
+-+..+...|.+.|.
T Consensus 39 gIG~aia~~la~~G~ 53 (269)
T 4dmm_A 39 GIGRAIALELAAAGA 53 (269)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCC
Confidence 334455555555554
No 221
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=26.60 E-value=2.4e+02 Score=23.39 Aligned_cols=59 Identities=14% Similarity=-0.005 Sum_probs=41.1
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC---CCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA---TATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da---~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|----.|= .|..+..+|.+|++++-. ....+++..+...+.++..+.++...
T Consensus 185 ~~~vvViGgG~ig~E--~A~~l~~~G~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~ 246 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLE--MGTVYSTLGSRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVN 246 (482)
T ss_dssp CSEEEEESCSHHHHH--HHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECS
T ss_pred CCeEEEECCCHHHHH--HHHHHHHcCCeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEEC
Confidence 578888886544433 345556779999999743 34457787888888888877776643
No 222
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=26.58 E-value=2e+02 Score=21.45 Aligned_cols=30 Identities=10% Similarity=0.076 Sum_probs=15.2
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... .-=.+.++.+.++|++|+++
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 37 (263)
T 3ai3_A 8 KVAVITGSSS-GIGLAIAEGFAKEGAHIVLV 37 (263)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3555555443 23345555555556655554
No 223
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=26.55 E-value=2.1e+02 Score=22.76 Aligned_cols=58 Identities=21% Similarity=0.124 Sum_probs=33.5
Q ss_pred HHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 126 LVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 126 L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+.+.|.++|+-+ -+.|.+ .++|..+..+|++++++-.... .+ ..-++.++..|++|+-
T Consensus 74 a~~~g~~~vv~~-SsGN~g-~alA~~a~~~G~~~~i~~p~~~-~~----~~k~~~~~~~GA~v~~ 131 (352)
T 2zsj_A 74 AVEAGKRAVICA-STGNTS-ASAAAYAARAGLRAYVLLPKGA-VA----IGKLSQAMIYGAKVLA 131 (352)
T ss_dssp HHHTTCCEEEEC-CSSHHH-HHHHHHHHHHTCEEEEEEEGGG-CC----HHHHHHHHHTTCEEEE
T ss_pred HHhcCCCEEEEe-CCchHH-HHHHHHHHhcCCcEEEEECCCC-CC----HHHHHHHHHcCCEEEE
Confidence 345777665554 555555 5667778888999777654431 11 2223455556666653
No 224
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=26.52 E-value=61 Score=21.70 Aligned_cols=41 Identities=5% Similarity=-0.002 Sum_probs=33.7
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
.++|++-..+|+......+.+.++.+.....|+.++.+...
T Consensus 30 ~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d 70 (152)
T 3gl3_A 30 VVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLD 70 (152)
T ss_dssp EEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred EEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECC
Confidence 57777788889888888999999999998888888877543
No 225
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=26.40 E-value=1e+02 Score=25.71 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=31.5
Q ss_pred CeEEEEEeccCccCCCc------h-hHHHHHHHHHHHHHHCCCcEEEEecccCC
Q 028963 23 SSVLLVIDMQNHFSSIA------K-PILDNTLATVQLCRRASIPVFFTRHCHKS 69 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~------~-~~i~~i~~l~~~ar~~g~~vi~~~~~~~~ 69 (201)
+.-+||||.-..+.... . .+..-...|-..|++.++|||.+.|..+.
T Consensus 313 ~~~livID~l~~~~~~~~~~~~~~~~i~~i~~~Lk~lAke~~i~vi~~sql~r~ 366 (454)
T 2r6a_A 313 GLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRS 366 (454)
T ss_dssp CCCEEEEECGGGSCCSCC----CHHHHHHHHHHHHHHHHHHTCCEEEEECCCTT
T ss_pred CCCEEEEccHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEecCCcc
Confidence 46799999888765321 1 22333344555678899999999886653
No 226
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=26.10 E-value=2.5e+02 Score=22.44 Aligned_cols=60 Identities=15% Similarity=0.058 Sum_probs=43.8
Q ss_pred EEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCch---hHHHHHHHHHhCCCeEEEecCCCCC
Q 028963 107 EVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNL---CCETTARDAFVRGFRVFFSTDATAT 168 (201)
Q Consensus 107 ~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~---CV~~Ta~~a~~~G~~v~vv~Da~~~ 168 (201)
..+-|...+. +.++.+.+-+.|++-|||.|+-.-. -.......|.++|..|++.+-|..+
T Consensus 218 V~il~~~pG~--~~~~l~~~~~~g~~GiVle~~G~Gn~p~~~~~~l~~a~~~gi~VV~~Sr~~~G 280 (330)
T 1wsa_A 218 VDILYAHPDD--TDVLVNAALQAGAKGIIHAGMGNGNPFPLTQNALEKAAKSGVVVARSSRVGSG 280 (330)
T ss_dssp EEEEECCSSC--CSHHHHHHHHTTCSEEEEEEBTTTBCCHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred eEEEEeCCCC--CHHHHHHHHhCCCCEEEEeeECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC
Confidence 3344444333 4566677777899999999987543 4666777889999999999988765
No 227
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=26.02 E-value=79 Score=24.26 Aligned_cols=30 Identities=30% Similarity=0.451 Sum_probs=19.3
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|....+. .++++.+.++|++|+++
T Consensus 17 k~vlVTGas~gIG-~~~a~~L~~~G~~V~~~ 46 (291)
T 3rd5_A 17 RTVVITGANSGLG-AVTARELARRGATVIMA 46 (291)
T ss_dssp CEEEEECCSSHHH-HHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCChHH-HHHHHHHHHCCCEEEEE
Confidence 5677777654333 56677777777777664
No 228
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=25.97 E-value=2.3e+02 Score=21.87 Aligned_cols=63 Identities=14% Similarity=0.119 Sum_probs=41.3
Q ss_pred CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcce
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFA 186 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~ 186 (201)
+++++.|...+++-|+|+--. .--..-++.|+++|.+|++=. - .+.+.+..+..++..+..+.
T Consensus 55 ~~~~ell~~~~vD~V~i~tp~--~~H~~~~~~al~aGkhVl~EK-P-la~~~~ea~~l~~~a~~~g~ 117 (294)
T 1lc0_A 55 ISLEDALRSQEIDVAYICSES--SSHEDYIRQFLQAGKHVLVEY-P-MTLSFAAAQELWELAAQKGR 117 (294)
T ss_dssp CCHHHHHHCSSEEEEEECSCG--GGHHHHHHHHHHTTCEEEEES-C-SCSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHhcCCCCCEEEEeCCc--HhHHHHHHHHHHCCCcEEEeC-C-CCCCHHHHHHHHHHHHHhCC
Confidence 578899988889988887543 334677788999999888733 2 23344444444544444444
No 229
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=25.93 E-value=82 Score=22.27 Aligned_cols=40 Identities=0% Similarity=-0.070 Sum_probs=33.7
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+.....++.++++.+..+..|+.||.+..
T Consensus 51 ~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~ 90 (185)
T 2gs3_A 51 VCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPC 90 (185)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEEC
T ss_pred EEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 5677888889988888899999999999888888888853
No 230
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=25.91 E-value=85 Score=25.32 Aligned_cols=30 Identities=20% Similarity=0.109 Sum_probs=23.4
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
+|+|+|- -..=+++|..+.++|++|+|++-
T Consensus 2 dVvVIGa--GiaGLsaA~~La~~G~~V~vlE~ 31 (425)
T 3ka7_A 2 KTVVIGA--GLGGLLSAARLSKAGHEVEVFER 31 (425)
T ss_dssp EEEEECC--BHHHHHHHHHHHHTTCEEEEECS
T ss_pred cEEEECC--CHHHHHHHHHHHhCCCceEEEeC
Confidence 4666663 34557889999999999999985
No 231
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=25.90 E-value=85 Score=24.51 Aligned_cols=32 Identities=22% Similarity=0.163 Sum_probs=27.1
Q ss_pred CcEEEEeecc-CchhHHHHHHHHHhCCCeEEEe
Q 028963 131 VEEVIVCGVM-TNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 131 i~~lvi~G~~-T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
-+.++|+|.. +..-=.++|+...++|++|+++
T Consensus 9 ~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~ 41 (319)
T 2ptg_A 9 GKTAFVAGVADSNGYGWAICKLLRAAGARVLVG 41 (319)
T ss_dssp TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence 3689999984 6777788999999999999887
No 232
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=25.88 E-value=1.9e+02 Score=21.66 Aligned_cols=30 Identities=17% Similarity=0.088 Sum_probs=15.3
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.. ..-=.+.++.+.++|++|+++
T Consensus 14 k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~ 43 (267)
T 1iy8_A 14 RVVLITGGG-SGLGRATAVRLAAEGAKLSLV 43 (267)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCC-CHHHHHHHHHHHHCCCEEEEE
Confidence 455555543 233345555555556665554
No 233
>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A
Probab=25.76 E-value=71 Score=23.82 Aligned_cols=39 Identities=13% Similarity=0.233 Sum_probs=31.6
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
||+.||=--+++....+.+...+.++.+++.|++++.+.
T Consensus 5 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~~aT 43 (258)
T 2pq0_A 5 IVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVAIAT 43 (258)
T ss_dssp EEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEEEEC
Confidence 889999888887655667778888889999999877653
No 234
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=25.76 E-value=2e+02 Score=21.79 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=16.2
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|... .-=.+.|+.+.++|++|+++
T Consensus 32 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGSR-GIGAAIAKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 4566666543 22345555566666666554
No 235
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=25.71 E-value=1.5e+02 Score=22.00 Aligned_cols=29 Identities=17% Similarity=0.234 Sum_probs=14.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
++++|+|...- -=.+.++.+.++|++|++
T Consensus 5 k~~lVTGas~g-IG~~ia~~l~~~G~~V~~ 33 (246)
T 3osu_A 5 KSALVTGASRG-IGRSIALQLAEEGYNVAV 33 (246)
T ss_dssp CEEEETTCSSH-HHHHHHHHHHHTTCEEEE
T ss_pred CEEEEECCCCh-HHHHHHHHHHHCCCEEEE
Confidence 34555555432 224455555556666554
No 236
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=25.65 E-value=1.3e+02 Score=21.97 Aligned_cols=47 Identities=13% Similarity=0.159 Sum_probs=29.9
Q ss_pred CCeEEEEEeccCccCCCc-------h--h--HHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 22 KSSVLLVIDMQNHFSSIA-------K--P--ILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~~-------~--~--~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
.+.-+|+||--..+.+.. . . +..-+..|.+.+++.|.+||.+.|...
T Consensus 118 ~~~~lliiD~~~~~~~~~~~~~~~~~~r~~~~~~~~~~l~~~~~~~~~tvi~~~h~~~ 175 (243)
T 1n0w_A 118 SRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVA 175 (243)
T ss_dssp SCEEEEEEETSSGGGC-------CHHHHHHHHHHHHHHHHHHHHHHCCEEEEEC----
T ss_pred CCceEEEEeCchHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeeeee
Confidence 357899999887766432 1 1 344555667778888999999987654
No 237
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=25.65 E-value=44 Score=26.91 Aligned_cols=42 Identities=17% Similarity=0.126 Sum_probs=33.4
Q ss_pred hHHHHHhCCCcEEEEeeccCchhHHHHHHHHHh--CCCeEEEec
Q 028963 122 LQERLVGMGVEEVIVCGVMTNLCCETTARDAFV--RGFRVFFST 163 (201)
Q Consensus 122 L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~--~G~~v~vv~ 163 (201)
+.+.++..+.++|+++|.-++.-+...+...+. .|..+.++.
T Consensus 33 ~~~~i~~~~~~~I~i~G~G~S~~aa~~~~~~l~~~~g~~v~~~~ 76 (334)
T 3hba_A 33 LGSVLREFKPKFVMIVGRGSSDHAGVFAKYLFEIEASIPTFAAA 76 (334)
T ss_dssp HHHHHHHHCCSCEEEESSGGGCHHHHHHHHHHHHHHCCCEEECC
T ss_pred HHHHHHhCCCCEEEEEEechHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 344566678999999999999998888877776 499988753
No 238
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus}
Probab=25.62 E-value=52 Score=28.31 Aligned_cols=31 Identities=10% Similarity=0.064 Sum_probs=20.6
Q ss_pred CCCCeEEEEEeccCccCCCchhHHHHHHHHHHHHH
Q 028963 20 NPKSSVLLVIDMQNHFSSIAKPILDNTLATVQLCR 54 (201)
Q Consensus 20 ~~~~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar 54 (201)
.+.+++|+.||+|++| ... .+.+...++.+.
T Consensus 383 ~~~~~~~vgvd~~~~~-~~~---~~~~~~~l~~~~ 413 (496)
T 2d1c_A 383 VPRSRRVVGVDVFVET-NLL---PEALGKALEDLA 413 (496)
T ss_dssp CCSCEEEEEEEEEEEC-CSC---HHHHHHHHHHHH
T ss_pred CCcceeEEEEeeeeec-CCC---HHHHHHHHHhcc
Confidence 5578899999999999 321 344444444444
No 239
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=25.57 E-value=91 Score=23.59 Aligned_cols=33 Identities=12% Similarity=0.154 Sum_probs=22.6
Q ss_pred CCcEEEEeeccCc-hhHHHHHHHHHhCCCeEEEe
Q 028963 130 GVEEVIVCGVMTN-LCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 130 gi~~lvi~G~~T~-~CV~~Ta~~a~~~G~~v~vv 162 (201)
.-++++|+|.+.. .-=.++|+...+.|++|++.
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~ 38 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFT 38 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEE
Confidence 3467788887653 34457777777888887765
No 240
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=25.56 E-value=2.4e+02 Score=22.38 Aligned_cols=58 Identities=16% Similarity=0.020 Sum_probs=34.2
Q ss_pred HHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 126 LVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 126 L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+.+.|.++|+-+ -+.|.+ .++|..+..+|++++++-.... .+ ..-++.++..|++|+-
T Consensus 72 a~~~g~~~vv~~-SsGN~g-~alA~~a~~~G~~~~iv~p~~~-~~----~~k~~~~~~~GA~V~~ 129 (351)
T 3aey_A 72 AVEGGAQAVACA-STGNTA-ASAAAYAARAGILAIVVLPAGY-VA----LGKVAQSLVHGARIVQ 129 (351)
T ss_dssp HHHTTCSEEEES-CSSHHH-HHHHHHHHHHTSEEEEEEETTC-SC----HHHHHHHHHTTCEEEE
T ss_pred HHhcCCCEEEEe-CCCHHH-HHHHHHHHHcCCCEEEEECCCC-CC----HHHHHHHHHcCCEEEE
Confidence 345777666554 555555 6677888889999777654321 11 1223445555666653
No 241
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=25.55 E-value=2e+02 Score=21.71 Aligned_cols=26 Identities=19% Similarity=0.074 Sum_probs=14.0
Q ss_pred CCCCCCCCchHHHHHhCCCcEEEEeec
Q 028963 113 TYSAFGNTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 113 ~~saf~~t~L~~~L~~~gi~~lvi~G~ 139 (201)
+-+.+-+..+...|.+.|.+ |++++-
T Consensus 28 Gas~gIG~~ia~~l~~~G~~-V~~~~r 53 (267)
T 1vl8_A 28 GGSRGLGFGIAQGLAEAGCS-VVVASR 53 (267)
T ss_dssp TTTSHHHHHHHHHHHHTTCE-EEEEES
T ss_pred CCCCHHHHHHHHHHHHCCCE-EEEEeC
Confidence 33444455666666666653 555544
No 242
>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10
Probab=25.50 E-value=48 Score=25.38 Aligned_cols=42 Identities=14% Similarity=0.196 Sum_probs=30.9
Q ss_pred CeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 23 SSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
+.-||+.||=.-+++....+.+...+.++.+++.|++++.+.
T Consensus 8 ~~~li~~DlDGTLl~~~~~~~~~~~~~l~~l~~~G~~~~iaT 49 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREANVPVILCS 49 (275)
T ss_dssp CCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHTTCCEEEEC
T ss_pred CceEEEEeCCCCCCCCCCcCCHHHHHHHHHHHHCCCeEEEEc
Confidence 346999999998886433333455677788888999988775
No 243
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=25.42 E-value=1.5e+02 Score=22.76 Aligned_cols=29 Identities=17% Similarity=0.068 Sum_probs=12.8
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
+.++|+|... .-=.+.++.+.+.|++|++
T Consensus 35 k~vlVTGas~-gIG~aia~~L~~~G~~V~~ 63 (291)
T 3cxt_A 35 KIALVTGASY-GIGFAIASAYAKAGATIVF 63 (291)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHHTTCEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEE
Confidence 3455555432 2223444444455555444
No 244
>3u9r_B MCC beta, methylcrotonyl-COA carboxylase, beta-subunit; carboxyltransferase, beta-BETA-alpha superhelix, ligase; HET: 1PE; 1.50A {Pseudomonas aeruginosa} PDB: 3u9s_B* 3u9t_B
Probab=25.40 E-value=81 Score=27.53 Aligned_cols=44 Identities=7% Similarity=0.100 Sum_probs=30.9
Q ss_pred CeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 23 SSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
..+++.-|.---.-.......+++.++.+.|.+.++|+|+..+.
T Consensus 122 ~v~V~a~D~tv~gGS~g~~~~~Ki~ra~e~A~~~~lPvI~l~dS 165 (555)
T 3u9r_B 122 ECMIVGNDATVKGGTYYPLTVKKHLRAQAIALENRLPCIYLVDS 165 (555)
T ss_dssp EEEEEEECTTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred EEEEEEECCccccCCCCHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 34444444322222235677899999999999999999999865
No 245
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=25.39 E-value=93 Score=23.38 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=15.9
Q ss_pred cEEEEeeccC-chhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMT-NLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T-~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... ..-=.+.|+.+.++|++|+++
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~ 39 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLHEAGARLIFT 39 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEe
Confidence 4555555553 223344555555556665554
No 246
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=25.30 E-value=1.6e+02 Score=22.88 Aligned_cols=56 Identities=13% Similarity=0.066 Sum_probs=38.2
Q ss_pred cEEEEeeccCchhH-HHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEe
Q 028963 132 EEVIVCGVMTNLCC-ETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 132 ~~lvi~G~~T~~CV-~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~ 189 (201)
+-+|+||---|..- +..||.+..+||+|.|+-= .....+.++..++.++..++.+.
T Consensus 81 ~VlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~--~~~~~~~~~~~~~~~~~~g~~~~ 137 (265)
T 2o8n_A 81 TVLVICGPGNNGGDGLVCARHLKLFGYQPTIYYP--KRPNKPLFTGLVTQCQKMDIPFL 137 (265)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECC--SCCSSHHHHHHHHHHHHTTCCBC
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEe--CCCCCHHHHHHHHHHHHcCCcEE
Confidence 56889996555544 4788999999999998632 11223556667777776665554
No 247
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=25.26 E-value=85 Score=23.76 Aligned_cols=31 Identities=19% Similarity=0.339 Sum_probs=17.0
Q ss_pred cEEEEeecc-CchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVM-TNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~-T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.. +..-=.+.++.+.++|++|+++
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~ 39 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQEQGAQLVLT 39 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCCchHHHHHHHHHHCCCEEEEE
Confidence 456666652 4444455556666666665554
No 248
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=25.15 E-value=2.6e+02 Score=22.49 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=61.0
Q ss_pred ccccccccCCCCCCCEEEECCCCCCCCCC----chHHHHHh-CC-C---cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 92 AELLPEIKGLVAGADEVIEKNTYSAFGNT----RLQERLVG-MG-V---EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 92 ~~~~~~l~~~~~~~~~vv~K~~~saf~~t----~L~~~L~~-~g-i---~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
.+.+.+++. ..+-+||.-.. +.++.| +|--+.+. .| - -+|.++|-.-+.-+.+-+..+...|.+|.++
T Consensus 110 ~~~~~~lA~--~~~vPVINa~~-~~~HPtQ~LaDl~Ti~e~~~g~~l~gl~ia~vGD~~~~va~Sl~~~~~~~G~~v~~~ 186 (333)
T 1duv_G 110 QEIVETLAE--YASVPVWNGLT-NEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLV 186 (333)
T ss_dssp HHHHHHHHH--HHSSCEEESCC-SSCCHHHHHHHHHHHHHHSTTCCGGGCEEEEESCTTSHHHHHHHHHHHHHCCEEEEE
T ss_pred chHHHHHHH--hCCCCeEcCCC-CCCCchHHHHHHHHHHHHhcCCCCCCcEEEEECCCccchHHHHHHHHHHcCCEEEEE
Confidence 344455554 33456676432 444433 33334444 45 2 4788899864555566666777789999998
Q ss_pred cCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 163 TDATATSDLELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 163 ~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
.--.-..+++..+.+-+..+..|+.+.-+.++-+++
T Consensus 187 ~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav 222 (333)
T 1duv_G 187 APQACWPEAALVTECRALAQQNGGNITLTEDVAKGV 222 (333)
T ss_dssp CCGGGCCCHHHHHHHHHHHHHTTCEEEEESCHHHHH
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCeEEEEECHHHHh
Confidence 877666666655555555556676655444444433
No 249
>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10
Probab=25.15 E-value=78 Score=24.64 Aligned_cols=41 Identities=12% Similarity=0.107 Sum_probs=32.7
Q ss_pred eEEEEEeccCccCCC-chhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 24 SVLLVIDMQNHFSSI-AKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~-~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
.-||+.|+=.-+++. ...+-+...+.++.+++.|++++.+.
T Consensus 27 ikli~~DlDGTLl~~~~~~is~~~~~al~~l~~~Gi~v~iaT 68 (301)
T 2b30_A 27 IKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEKGYMVSICT 68 (301)
T ss_dssp CCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHHTCEEEEEC
T ss_pred ccEEEEECCCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEc
Confidence 349999999998886 55666677788888888899888774
No 250
>1xrh_A Ureidoglycolate dehydrogenase; structural genomics, protein structure initiative, NYSGXRC, ALLD, GLXB8, B0517, PSI; 2.25A {Escherichia coli} SCOP: c.122.1.1
Probab=25.03 E-value=51 Score=26.96 Aligned_cols=45 Identities=4% Similarity=0.014 Sum_probs=35.6
Q ss_pred CCeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 22 KSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
...++++||-+++|-. -.....+..+++.||++|+-++.+++.+.
T Consensus 74 ~~~a~~~vDg~~g~G~--~~~~~am~~aiekAk~~Gi~~v~vrns~H 118 (351)
T 1xrh_A 74 TGPCSAILHADNAAGQ--VAAKMGMEHAIKTAQQNGVAVVGISRMGH 118 (351)
T ss_dssp CSSSEEEEEEEEECHH--HHHHHHHHHHHHHHHHHSEEEEEEEEECC
T ss_pred cCCcEEEEECCCCcHH--HHHHHHHHHHHHHHHHcCEEEEEEeCCCC
Confidence 4678999999998842 22455677889999999999999988765
No 251
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=24.97 E-value=1.7e+02 Score=22.58 Aligned_cols=54 Identities=15% Similarity=0.148 Sum_probs=43.1
Q ss_pred CCCCCCCCCCchHHHHHhCCCcEEEEee-------ccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 111 KNTYSAFGNTRLQERLVGMGVEEVIVCG-------VMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 111 K~~~saf~~t~L~~~L~~~gi~~lvi~G-------~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
....++|++.--...|++.|++.++|-= -.||.-|..-+..|.+.|..+++...
T Consensus 67 ~~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvG 127 (250)
T 1yya_A 67 AHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGITPILCVG 127 (250)
T ss_dssp SSSSBSCTTCCCHHHHHHTTCSEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCccCcCCHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcC
Confidence 3456889888888999999998887742 26888888899999999999888543
No 252
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=24.85 E-value=2.7e+02 Score=22.71 Aligned_cols=65 Identities=11% Similarity=-0.002 Sum_probs=41.7
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHH
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEA 196 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~ 196 (201)
-+|.++|-.-+.-+.+-+..+...|.+|.++.-..-..+++..+.+-+..+..|+.+.-+.++-+
T Consensus 177 l~va~vGD~~~rva~Sl~~~~~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~d~~e 241 (359)
T 2w37_A 177 LTLTFMGDGRNNVANSLLVTGAILGVNIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITDDLDE 241 (359)
T ss_dssp CEEEEESCTTSHHHHHHHHHHHHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEESCHHH
T ss_pred eEEEEECCCccchHHHHHHHHHHcCCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEeCHHH
Confidence 57888888645555666667777899999988777666665544444444455655444444433
No 253
>1nxu_A Hypothetical oxidoreductase YIAK; hypothetical protein, structural genomics, PSI, protein structure initiative; 1.80A {Escherichia coli} SCOP: c.122.1.1 PDB: 1s20_A*
Probab=24.84 E-value=61 Score=26.28 Aligned_cols=44 Identities=11% Similarity=0.077 Sum_probs=34.9
Q ss_pred CeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 23 SSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
..++++||-+++|-. -.....+..+++.||++|+-++.+++.+.
T Consensus 73 ~~a~~~vDg~~g~G~--~~~~~am~~aiekAk~~Gi~~v~vrns~H 116 (333)
T 1nxu_A 73 LGAIEQWDAQRSIGN--LTAKKMMDRAIELAADHGIGLVALRNANH 116 (333)
T ss_dssp ETTEEEEECTTCCHH--HHHHHHHHHHHHHHHHHSEEEEEEEEECC
T ss_pred CCcEEEEECCCCcHH--HHHHHHHHHHHHHHHHcCEEEEEEeCCCC
Confidence 568899999998842 22456677889999999999999998765
No 254
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=24.81 E-value=2.6e+02 Score=22.07 Aligned_cols=63 Identities=13% Similarity=0.009 Sum_probs=40.7
Q ss_pred CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcce
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFA 186 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~ 186 (201)
+++++.|...+++-|+|+--.. .-..-++.|+++|.+|++=.= -+.+.+..+..++..+..+.
T Consensus 57 ~~~~~ll~~~~vD~V~i~tp~~--~H~~~~~~al~aGkhV~~EKP--la~~~~e~~~l~~~a~~~g~ 119 (352)
T 3kux_A 57 SDPQMLFNDPSIDLIVIPTPND--THFPLAQSALAAGKHVVVDKP--FTVTLSQANALKEHADDAGL 119 (352)
T ss_dssp SCHHHHHHCSSCCEEEECSCTT--THHHHHHHHHHTTCEEEECSS--CCSCHHHHHHHHHHHHHTTC
T ss_pred CCHHHHhcCCCCCEEEEeCChH--HHHHHHHHHHHCCCcEEEECC--CcCCHHHHHHHHHHHHHcCC
Confidence 5788999988899999877333 335667889999988776332 23344444444444444443
No 255
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=24.76 E-value=66 Score=23.66 Aligned_cols=29 Identities=14% Similarity=0.232 Sum_probs=17.4
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+++|+|..... =.+.++.+.++|++|+++
T Consensus 3 ~vlVTGas~gI-G~~~a~~l~~~G~~V~~~ 31 (230)
T 3guy_A 3 LIVITGASSGL-GAELAKLYDAEGKATYLT 31 (230)
T ss_dssp CEEEESTTSHH-HHHHHHHHHHTTCCEEEE
T ss_pred EEEEecCCchH-HHHHHHHHHHCCCEEEEE
Confidence 46666665433 346666666677776665
No 256
>1vbi_A Type 2 malate/lactate dehydrogenase; malate dehydrogenase, NAD(P) binding protein, thermus thermo HB8, structural genomics; HET: NAD; 1.80A {Thermus thermophilus} PDB: 1x0a_A
Probab=24.67 E-value=61 Score=26.38 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=34.3
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
.++++||-+++|-. -.....+..+++.||++|+-++.+++.+.
T Consensus 73 ~a~~~vDg~~g~G~--~~~~~am~~aiekAk~~Gi~~v~vrns~H 115 (344)
T 1vbi_A 73 GPVALLDGEHGFGP--RVALKAVEAAQSLARRHGLGAVGVRRSTH 115 (344)
T ss_dssp TTEEEEECTTBCHH--HHHHHHHHHHHHHHHHHSEEEEEEEEECC
T ss_pred CcEEEEECCCCcHH--HHHHHHHHHHHHHHHHcCEEEEEEeCCCC
Confidence 68899999998842 22455677889999999999999988765
No 257
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=24.65 E-value=1.2e+02 Score=22.95 Aligned_cols=31 Identities=23% Similarity=0.238 Sum_probs=19.8
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
-+.++|+|.... ==.++|+...++|++|++.
T Consensus 27 ~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~ 57 (267)
T 3u5t_A 27 NKVAIVTGASRG-IGAAIAARLASDGFTVVIN 57 (267)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEE
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEE
Confidence 356777776543 3356667777777777764
No 258
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=24.65 E-value=2.6e+02 Score=22.10 Aligned_cols=57 Identities=11% Similarity=0.009 Sum_probs=37.4
Q ss_pred cEEEEeeccCchhH-HHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEe
Q 028963 132 EEVIVCGVMTNLCC-ETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 132 ~~lvi~G~~T~~CV-~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~ 189 (201)
+-+|+||---|..- +..|+.+..+||+|.|+.=.-.... +.....++.+...++.+.
T Consensus 134 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~V~~~~~~~~~-~~a~~~~~~~~~~g~~~~ 191 (306)
T 3d3j_A 134 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKML-ESITNELSLFSKTQGQQV 191 (306)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCCCSSCC-HHHHHHHHHHHTSSCEEE
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCcEEEEEecCCCCC-HHHHHHHHHHHHcCCccc
Confidence 56889996555544 5888999999999998742211222 334556677776666554
No 259
>2zjr_L 50S ribosomal protein L18; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans} SCOP: c.55.4.1 PDB: 1sm1_M* 2zjp_L* 2zjq_L 1nkw_M 3cf5_L* 3dll_L* 3pio_L* 3pip_L* 1nwy_M* 1nwx_M* 1xbp_M* 1pnu_M 1pny_M 1vor_P 1vou_P 1vow_P 1voy_P 1vp0_P
Probab=24.62 E-value=59 Score=22.05 Aligned_cols=39 Identities=15% Similarity=0.123 Sum_probs=30.7
Q ss_pred CchHHHHHhCCCcEEEE--eeccCchhHHHHHHHHHhCCCe
Q 028963 120 TRLQERLVGMGVEEVIV--CGVMTNLCCETTARDAFVRGFR 158 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi--~G~~T~~CV~~Ta~~a~~~G~~ 158 (201)
.-|.+.+.+.||+++++ .|.-.+.-|.+-+..|.+.|.+
T Consensus 73 ~llA~Ral~~GI~~vvfDrgg~~yhgrV~Ala~~are~GL~ 113 (114)
T 2zjr_L 73 KALAAAAAEKGIKQVVFDRGSYKYHGRVKALADAAREGGLD 113 (114)
T ss_dssp HHHHHHHHTTCCCCCEECCCSSCSCSHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHHHhCCc
Confidence 34677777889999887 6778899999999999888864
No 260
>3hry_A PHD protein, prevent HOST death protein; intrinsic disorder, DOC, antitoxin; 2.25A {Escherichia coli} PDB: 3k33_B 3kh2_E
Probab=24.60 E-value=95 Score=18.78 Aligned_cols=27 Identities=19% Similarity=0.067 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 41 PILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 41 ~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
....+..++++.+ ..|-||+.+++..+
T Consensus 8 ear~~l~~ll~~v-~~~e~v~Itr~g~~ 34 (73)
T 3hry_A 8 TARGNLSEVLNNV-EAGEEVEITRRGRE 34 (73)
T ss_dssp HHHHHHHHHHHHH-TTTCCEEEECSSSC
T ss_pred HHHHhHHHHHHHH-hCCCcEEEEECCCc
Confidence 4567888999988 57899999987643
No 261
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=24.59 E-value=2.1e+02 Score=21.03 Aligned_cols=15 Identities=27% Similarity=0.206 Sum_probs=6.7
Q ss_pred HHHHHHHhCCCeEEE
Q 028963 147 TTARDAFVRGFRVFF 161 (201)
Q Consensus 147 ~Ta~~a~~~G~~v~v 161 (201)
+.++.+.++|++|++
T Consensus 19 ~ia~~l~~~G~~V~~ 33 (246)
T 2uvd_A 19 AIAIDLAKQGANVVV 33 (246)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCEEEE
Confidence 344444444444443
No 262
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=24.56 E-value=1.8e+02 Score=22.70 Aligned_cols=66 Identities=18% Similarity=0.103 Sum_probs=40.4
Q ss_pred CCchHHHHHhCCCcEEEEeecc-CchhHHHHHHHHHhCCC-eEEEecCCCCCCC----HHHHHHHHHHHhhc
Q 028963 119 NTRLQERLVGMGVEEVIVCGVM-TNLCCETTARDAFVRGF-RVFFSTDATATSD----LELHEATLKNLAYG 184 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~~-T~~CV~~Ta~~a~~~G~-~v~vv~Da~~~~~----~~~h~~al~~l~~~ 184 (201)
+++|.+.+.+.|..-++=.|.. |-.-+...+......|- +++++.-|+.++. ....-.++..|++.
T Consensus 134 n~~ll~~~a~~~kPV~lk~G~~~t~~ei~~Ave~i~~~Gn~~i~L~~Rg~~~yp~y~~~~vdl~~i~~lk~~ 205 (276)
T 1vs1_A 134 NFPLLREVGRSGKPVLLKRGFGNTVEELLAAAEYILLEGNWQVVLVERGIRTFEPSTRFTLDVAAVAVLKEA 205 (276)
T ss_dssp CHHHHHHHHHHTCCEEEECCTTCCHHHHHHHHHHHHHTTCCCEEEEECCBCCSCCSSSSBCBHHHHHHHHHH
T ss_pred CHHHHHHHHccCCeEEEcCCCCCCHHHHHHHHHHHHHcCCCeEEEEeCCcCCCCCcCcchhCHHHHHHHHHH
Confidence 5567777777777777777886 55555555555566664 6777777776542 12223335556553
No 263
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=24.52 E-value=95 Score=23.23 Aligned_cols=24 Identities=13% Similarity=-0.098 Sum_probs=14.4
Q ss_pred CCCCCchHHHHHhCCCcEEEEeecc
Q 028963 116 AFGNTRLQERLVGMGVEEVIVCGVM 140 (201)
Q Consensus 116 af~~t~L~~~L~~~gi~~lvi~G~~ 140 (201)
.+-+..+...|.+.|. +|++++..
T Consensus 26 ~giG~~ia~~l~~~G~-~V~~~~r~ 49 (271)
T 3ek2_A 26 RSIAYGIAKACKREGA-ELAFTYVG 49 (271)
T ss_dssp TSHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CcHHHHHHHHHHHcCC-CEEEEecc
Confidence 4445666677777775 45555544
No 264
>3e5y_A TRMH family RNA methyltransferase; ssgcid, protein knot, decode, structural genomics; 2.40A {Burkholderia pseudomallei 305} SCOP: c.116.1.0
Probab=24.50 E-value=1.9e+02 Score=20.34 Aligned_cols=67 Identities=13% Similarity=0.001 Sum_probs=46.7
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHH-HHHHHHHHHh-hcceEEeeHHHHHHhhc
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLE-LHEATLKNLA-YGFAYLFDCERLEAGLF 199 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~-~h~~al~~l~-~~~~~v~~~~e~~~~l~ 199 (201)
.|++.++....=+-+-+|.|...|++.+++...+.+.... ..+.++..+. -....+-+.+++++.++
T Consensus 7 ~vvLd~i~dp~NlGaI~Rta~a~G~~~viv~~~~~~~~~~~~~ras~g~~~~~~~~~~~~l~~~l~~l~ 75 (160)
T 3e5y_A 7 NVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQMRVHRDWDAFVAAEA 75 (160)
T ss_dssp EEEEESCCCHHHHHHHHHHHHHHTCEEEEESSCSSCCCHHHHHHTTCCHHHHHTCEEESSHHHHHHHHC
T ss_pred EEEEeCCCCCCcHHHHHHHHHHcCCcEEEECCCCCCCccHHHHHHcCCchhhcceEEeCCHHHHHHHHH
Confidence 6788899998889999999999999999988877665532 3233322221 12334667888887764
No 265
>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A
Probab=24.50 E-value=47 Score=24.72 Aligned_cols=40 Identities=13% Similarity=0.277 Sum_probs=31.3
Q ss_pred EEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 25 VLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 25 aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
-||+.|+-.-+++....+-+...+.++.+++.|++++.+.
T Consensus 6 kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~g~~~~i~T 45 (227)
T 1l6r_A 6 RLAAIDVDGNLTDRDRLISTKAIESIRSAEKKGLTVSLLS 45 (227)
T ss_dssp CEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEECCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEC
Confidence 3899999888877655566777788888889999887775
No 266
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=24.48 E-value=2.5e+02 Score=21.87 Aligned_cols=55 Identities=15% Similarity=0.025 Sum_probs=29.2
Q ss_pred hCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 128 GMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 128 ~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+.|.++|+-++ ..|.+.. .|..+..+|++++++.....+ + .-++.|+..|++|+-
T Consensus 51 ~~g~~~vv~~s-sGN~g~a-lA~~a~~~G~~~~i~~p~~~~--~----~k~~~~~~~Ga~V~~ 105 (318)
T 2rkb_A 51 KKGCRHLVCSS-GGNAGIA-AAYAARKLGIPATIVLPESTS--L----QVVQRLQGEGAEVQL 105 (318)
T ss_dssp HTTCCEEEECC-CSHHHHH-HHHHHHHHTCCEEEEECTTCC--H----HHHHHHHHTTCEEEE
T ss_pred HcCCCEEEEEC-CchHHHH-HHHHHHHcCCCEEEEECCCCc--H----HHHHHHHhcCCEEEE
Confidence 35655555553 3444443 555666777777766554322 1 234444555666653
No 267
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=24.45 E-value=2.1e+02 Score=21.04 Aligned_cols=28 Identities=18% Similarity=0.080 Sum_probs=12.1
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEE
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~v 161 (201)
+++|+|... .-=.+.++.+.++|++|++
T Consensus 9 ~vlITGasg-giG~~~a~~l~~~G~~V~~ 36 (261)
T 1gee_A 9 VVVITGSST-GLGKSMAIRFATEKAKVVV 36 (261)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEEEeCCCC-hHHHHHHHHHHHCCCEEEE
Confidence 444444332 2223444444444555444
No 268
>1yzy_A Hypothetical protein HI1011; putative tRNA synthase, structural genomics, PSI, protein structure initiative; 2.10A {Haemophilus influenzae} SCOP: c.146.1.1
Probab=24.36 E-value=3e+02 Score=22.69 Aligned_cols=136 Identities=10% Similarity=0.117 Sum_probs=67.2
Q ss_pred chhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCC--cc--ccCCCCccccccccC---CCCC-------
Q 028963 39 AKPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGD--LV--YDGTADAELLPEIKG---LVAG------- 104 (201)
Q Consensus 39 ~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~--~~--~~g~~g~~~~~~l~~---~~~~------- 104 (201)
.+...+.+.+..++.++.|.+.+|.+.+.+-++.. +..++.- .. .-|....-+.|.+.. ....
T Consensus 55 ~~eA~~~~~~~~~~l~~~g~~~~~~k~csr~DSTl---RGnig~e~dal~~~~g~~~~iv~PAfP~~GR~t~~G~~~v~~ 131 (413)
T 1yzy_A 55 VNEAIEQSLRAYQWLKENGCTQFYFKYCSTFDSTA---KGNIGPVTDALLDELNEDFTVITPALPVNGRTIFNGYLFVGD 131 (413)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSEEEECCTTCCCCT---TCTHHHHHHHHHHHHTCCCEEECCCBGGGTEEEETTEEEETT
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeEEEEecCccCCC---CCChHHHHHHHHHHhCCCcEEEEccccCCCCEEECCEEEECC
Confidence 34567778888888888898888876554433221 0000000 00 001111111222211 0000
Q ss_pred ---CCEEEECCCCCCCCCCchHHHHHhCCCcEEEEeeccCch----hHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHH
Q 028963 105 ---ADEVIEKNTYSAFGNTRLQERLVGMGVEEVIVCGVMTNL----CCETTARDAFVRGFRVFFSTDATATSDLELHEAT 177 (201)
Q Consensus 105 ---~~~vv~K~~~saf~~t~L~~~L~~~gi~~lvi~G~~T~~----CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~a 177 (201)
.+..+.++-..++.+.+|.++|.++....+....+.+=. .+..-...+.+.|.+++|+ |+....+-+....+
T Consensus 132 ~pl~et~~a~dp~tP~~~s~l~~~l~~qt~~~v~~i~l~~v~~g~~~~~~~l~~~~~~g~~~vV~-DA~t~~DL~~ia~a 210 (413)
T 1yzy_A 132 VLLSESGMKNHPITPMVDANLMRLMDAQAKGKTGLVAYADVIKGASRVQECFAELKAQGYRYAVV-DAVDNSQLEVLAEA 210 (413)
T ss_dssp EEGGGSGGGGCSSSCCCCCBHHHHHHHHCSSCEEEECHHHHTTCHHHHHHHHHHHHHTTCSEEEE-CBSSTHHHHHHHHH
T ss_pred EEcCCCccccCCCCCCCchHHHHHHHHHhCCCEEEEEHHHHhCCHHHHHHHHHHHHhcCCcEEEE-eCCCHHHHHHHHHH
Confidence 111233444566678899999998776666555443211 1223333444567776554 88877554443333
Q ss_pred H
Q 028963 178 L 178 (201)
Q Consensus 178 l 178 (201)
+
T Consensus 211 ~ 211 (413)
T 1yzy_A 211 V 211 (413)
T ss_dssp T
T ss_pred H
Confidence 3
No 269
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=24.33 E-value=2.7e+02 Score=22.12 Aligned_cols=100 Identities=15% Similarity=0.039 Sum_probs=57.6
Q ss_pred ccccccccCCCCCCCEEEECCCCCCCCCC----chHHHHHhCC---CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 92 AELLPEIKGLVAGADEVIEKNTYSAFGNT----RLQERLVGMG---VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 92 ~~~~~~l~~~~~~~~~vv~K~~~saf~~t----~L~~~L~~~g---i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
...+.+++. ...-+||+-.. +-++.| +|--+.+..| --+|.++|-.-+.-+.+-+..+...|++|.++.-
T Consensus 105 ~~~~~~lA~--~~~vPVINa~~-~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~~rva~Sl~~~~~~~g~~v~~~~P 181 (307)
T 2i6u_A 105 QERLDAMAS--VATVPVINALS-DEFHPCQVLADLQTIAERKGALRGLRLSYFGDGANNMAHSLLLGGVTAGIHVTVAAP 181 (307)
T ss_dssp HHHHHHHHH--HCSSCEEESCC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhHHHHHHh--hCCCCEEcCCC-CCcCccHHHHHHHHHHHHhCCcCCeEEEEECCCCcCcHHHHHHHHHHCCCEEEEECC
Confidence 344555655 34566777432 333332 2333333333 2478889986455556777777789999999988
Q ss_pred CCCCCCHHHHHHHHHHHhhcceEEeeHHHH
Q 028963 165 ATATSDLELHEATLKNLAYGFAYLFDCERL 194 (201)
Q Consensus 165 a~~~~~~~~h~~al~~l~~~~~~v~~~~e~ 194 (201)
-.-..+++..+.+-+..+..|+.+.-+.++
T Consensus 182 ~~~~~~~~~~~~~~~~a~~~G~~~~~~~d~ 211 (307)
T 2i6u_A 182 EGFLPDPSVRAAAERRAQDTGASVTVTADA 211 (307)
T ss_dssp TTSCCCHHHHHHHHHHHHHHTCCEEEESCH
T ss_pred ccccCCHHHHHHHHHHHHHcCCeEEEEECH
Confidence 766666655444444444556554433333
No 270
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=24.24 E-value=2e+02 Score=22.35 Aligned_cols=56 Identities=25% Similarity=0.126 Sum_probs=33.2
Q ss_pred HhCCC--cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 127 VGMGV--EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 127 ~~~gi--~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
.+.|. +. |++.-+.|.+. ++|..+..+|++++++-....+ + .-+..++..|++|+-
T Consensus 59 ~~~g~~~~~-vv~aSsGN~g~-a~A~aa~~~G~~~~iv~p~~~~--~----~k~~~~~~~GA~V~~ 116 (303)
T 1o58_A 59 EKRGLLKNG-IVEPTSGNMGI-AIAMIGAKRGHRVILTMPETMS--V----ERRKVLKMLGAELVL 116 (303)
T ss_dssp HHTTCCTTC-EEEECSSHHHH-HHHHHHHHHTCCEEEEEETTSC--H----HHHHHHHHTTCEEEE
T ss_pred HHcCCCCCC-EEEECchHHHH-HHHHHHHHcCCcEEEEECCCCC--H----HHHHHHHHcCCEEEE
Confidence 34554 44 55555555555 6777788999998776554322 2 233445556777664
No 271
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=24.22 E-value=1.7e+02 Score=22.00 Aligned_cols=30 Identities=17% Similarity=0.279 Sum_probs=15.7
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.... ==.+.|+...++|++|+++
T Consensus 11 k~~lVTGas~g-IG~aia~~l~~~G~~V~~~ 40 (267)
T 3t4x_A 11 KTALVTGSTAG-IGKAIATSLVAEGANVLIN 40 (267)
T ss_dssp CEEEETTCSSH-HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCcH-HHHHHHHHHHHCCCEEEEE
Confidence 45566664432 2345555555666665554
No 272
>3q98_A Transcarbamylase; rossmann fold, transferase; 2.00A {Escherichia coli}
Probab=24.16 E-value=3.1e+02 Score=22.74 Aligned_cols=66 Identities=8% Similarity=-0.075 Sum_probs=40.7
Q ss_pred EEEEeec------cCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 133 EVIVCGV------MTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 133 ~lvi~G~------~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
+|.++|. .++.-..+-+..+...|++|.++.-.--...++..+.+-+.....|+.+.-+.++-+++
T Consensus 193 kva~vgd~~~~~G~~nnVa~Sli~~~~~lG~~v~~~~P~~~~~~~~~~~~a~~~a~~~G~~i~~~~d~~eav 264 (399)
T 3q98_A 193 KIAMTWAYSPSYGKPLSVPQGIIGLMTRFGMDVTLAHPEGYDLIPDVVEVAKNNAKASGGSFRQVTSMEEAF 264 (399)
T ss_dssp EEEEECCCCSSCCCCTHHHHHHHHHHGGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEESCHHHHH
T ss_pred EEEEEEecccccCcchHHHHHHHHHHHHcCCEEEEECCcccCCCHHHHHHHHHHHHHcCCEEEEEcCHHHHh
Confidence 7888874 23334456666677789999998765445567666655555555666654444444333
No 273
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=24.09 E-value=1.4e+02 Score=20.40 Aligned_cols=41 Identities=7% Similarity=0.049 Sum_probs=33.5
Q ss_pred EEEEeccCccCC-CchhHHHHHHHHHHHHHHCC--CcEEEEecc
Q 028963 26 LLVIDMQNHFSS-IAKPILDNTLATVQLCRRAS--IPVFFTRHC 66 (201)
Q Consensus 26 LlviD~Q~~f~~-~~~~~i~~i~~l~~~ar~~g--~~vi~~~~~ 66 (201)
.++|++...+|+ .....++.+.++.+..+..+ +.||.+...
T Consensus 35 ~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d 78 (174)
T 1xzo_A 35 VWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVD 78 (174)
T ss_dssp CEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred EEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeC
Confidence 377888888898 77788999999999988886 888888643
No 274
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=24.08 E-value=47 Score=22.89 Aligned_cols=39 Identities=8% Similarity=-0.047 Sum_probs=32.7
Q ss_pred EEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 27 LVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 27 lviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
++|+.. ..+|+......+.+.++.+..+..|+.+|.+..
T Consensus 32 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~ 71 (161)
T 3drn_A 32 IVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSS 71 (161)
T ss_dssp EEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEES
T ss_pred EEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 677888 788887788899999999999988888887754
No 275
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=24.03 E-value=1.8e+02 Score=22.38 Aligned_cols=55 Identities=16% Similarity=0.104 Sum_probs=44.0
Q ss_pred CCCCCCCCCCchHHHHHhCCCcEEEEee-------ccCchhHHHHHHHHHhCCCeEEEecCC
Q 028963 111 KNTYSAFGNTRLQERLVGMGVEEVIVCG-------VMTNLCCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 111 K~~~saf~~t~L~~~L~~~gi~~lvi~G-------~~T~~CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
....++|++.--...|++.|++.++|-= -.||.-|..-+..|.+.|..+++...=
T Consensus 68 ~~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pI~CvGE 129 (248)
T 1r2r_A 68 KVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGE 129 (248)
T ss_dssp SSSSBSCTTCCCHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCccCccCHHHHHHcCCCEEEECChhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3457889888888999999999887642 258888889999999999999985443
No 276
>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A
Probab=24.02 E-value=65 Score=24.39 Aligned_cols=39 Identities=23% Similarity=0.267 Sum_probs=30.4
Q ss_pred EEEEeccCccCCCchhHHHH-HHHHHHHHHHCCCcEEEEe
Q 028963 26 LLVIDMQNHFSSIAKPILDN-TLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~-i~~l~~~ar~~g~~vi~~~ 64 (201)
||+.|+=.-+++....+.+. +.+.++.++++|++++.+.
T Consensus 5 li~~DlDGTLl~~~~~i~~~~~~~al~~l~~~G~~~~iaT 44 (271)
T 1rlm_A 5 VIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIKFVVAS 44 (271)
T ss_dssp EEEECCCCCCSCTTSCCCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred EEEEeCCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 89999998888765555555 4778888888999887775
No 277
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=24.01 E-value=1.4e+02 Score=24.55 Aligned_cols=64 Identities=8% Similarity=-0.056 Sum_probs=31.9
Q ss_pred CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhc
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYG 184 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~ 184 (201)
..|.++++..|-+-++|+|-...--....+.+.++.|+.+ +..+-....+.+.-+...+.++..
T Consensus 42 ~~l~~~l~~~g~r~liVtd~~~~~~~~~~v~~~L~~g~~~-~~~~~~~~p~~~~v~~~~~~~~~~ 105 (387)
T 3uhj_A 42 DKLAAYLAPLGKRALVLIDRVLFDALSERIGKSCGDSLDI-RFERFGGECCTSEIERVRKVAIEH 105 (387)
T ss_dssp TTTHHHHGGGCSEEEEEECTTTHHHHHHHC------CCEE-EEEECCSSCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEEECchHHHHHHHHHHHHHHcCCCe-EEEEcCCCCCHHHHHHHHHHHhhc
Confidence 3677888887834445555443333344444455447776 433333444556666666666543
No 278
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=23.93 E-value=95 Score=23.39 Aligned_cols=31 Identities=19% Similarity=0.270 Sum_probs=16.2
Q ss_pred cEEEEeeccC-chhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMT-NLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T-~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... ..-=.+.++.+.++|++|+++
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~ 41 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMHREGAELAFT 41 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
Confidence 4556666542 333345555555566665554
No 279
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=23.93 E-value=1e+02 Score=23.51 Aligned_cols=22 Identities=14% Similarity=0.058 Sum_probs=10.7
Q ss_pred CCCCchHHHHHhCCCcEEEEeec
Q 028963 117 FGNTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 117 f~~t~L~~~L~~~gi~~lvi~G~ 139 (201)
+-+..+...|.+.|. +|++++-
T Consensus 43 GIG~aia~~la~~G~-~V~~~~r 64 (276)
T 3r1i_A 43 GIGKKVALAYAEAGA-QVAVAAR 64 (276)
T ss_dssp HHHHHHHHHHHHTTC-EEEEEES
T ss_pred HHHHHHHHHHHHCCC-EEEEEeC
Confidence 334455555555554 2444444
No 280
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=23.90 E-value=67 Score=23.88 Aligned_cols=28 Identities=14% Similarity=0.287 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHCCCcEEEEecccCC
Q 028963 42 ILDNTLATVQLCRRASIPVFFTRHCHKS 69 (201)
Q Consensus 42 ~i~~i~~l~~~ar~~g~~vi~~~~~~~~ 69 (201)
.+.+...+++.+++.|.||+...+.|.+
T Consensus 145 ~~~~~~~il~l~k~~g~~ivisSDAh~~ 172 (212)
T 1v77_A 145 LLRFMMKAWKLVEKYKVRRFLTSSAQEK 172 (212)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSSG
T ss_pred HHHHHHHHHHHHHhcCCCEEEeCCCCCh
Confidence 4678889999999999999999988763
No 281
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=23.88 E-value=85 Score=23.69 Aligned_cols=16 Identities=19% Similarity=0.241 Sum_probs=7.5
Q ss_pred CCCCCchHHHHHhCCC
Q 028963 116 AFGNTRLQERLVGMGV 131 (201)
Q Consensus 116 af~~t~L~~~L~~~gi 131 (201)
.|-+..|...|.++|.
T Consensus 14 G~iG~~l~~~L~~~g~ 29 (286)
T 3ius_A 14 GYTARVLSRALAPQGW 29 (286)
T ss_dssp CHHHHHHHHHHGGGTC
T ss_pred cHHHHHHHHHHHHCCC
Confidence 3444445555544443
No 282
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=23.83 E-value=84 Score=23.83 Aligned_cols=31 Identities=16% Similarity=0.116 Sum_probs=19.3
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
.+|+|+| + ..-=...+..+.++|++|+++..
T Consensus 4 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIAG-C-GDLGLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp CCEEEEC-C-SHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEEC-C-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 3577777 4 44444555666677777777643
No 283
>1v9n_A Malate dehydrogenase; riken structural genomics/proteomics initiati structural genomics, oxidoreductase; HET: NDP; 2.10A {Pyrococcus horikoshii}
Probab=23.81 E-value=65 Score=26.43 Aligned_cols=45 Identities=9% Similarity=0.154 Sum_probs=35.2
Q ss_pred CCeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 22 KSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
...+.++||-+++|-. -.....+..+++.||++|+-++.+++.+.
T Consensus 83 ~~~a~~~vDg~~g~G~--~~~~~am~~aiekAk~~Gi~~v~vrns~H 127 (360)
T 1v9n_A 83 EGPSYALIDGDEGLGQ--VVGYRSMKLAIKKAKDTGIGIVIARNSNH 127 (360)
T ss_dssp EETTEEEEECTTBCHH--HHHHHHHHHHHHHHHHHSEEEEEEEEECC
T ss_pred eCCcEEEEECCCCcHH--HHHHHHHHHHHHHHHHcCEEEEEEeCCCC
Confidence 3568899999998842 22456677889999999999999988765
No 284
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=23.79 E-value=1e+02 Score=24.47 Aligned_cols=31 Identities=16% Similarity=0.098 Sum_probs=23.5
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecCC
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
+|+|+|.- .+=+.+|..+..+|++|+|++-.
T Consensus 3 ~V~IVGaG--paGl~~A~~L~~~G~~v~v~Er~ 33 (412)
T 4hb9_A 3 HVGIIGAG--IGGTCLAHGLRKHGIKVTIYERN 33 (412)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECcC--HHHHHHHHHHHhCCCCEEEEecC
Confidence 57777755 44566778888999999999743
No 285
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=23.65 E-value=1.4e+02 Score=23.95 Aligned_cols=104 Identities=12% Similarity=0.076 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCccccccccCCCCCCCEEEECCCCCCCCC--
Q 028963 42 ILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGN-- 119 (201)
Q Consensus 42 ~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~-- 119 (201)
+=..|..+++.+..+|..|+-+++.+..- + ... +.+=+ ++-+..+.. .++ ..+--.++..|..
T Consensus 17 mNaair~vv~~a~~~g~~v~Gi~~G~~GL-----~----~~~-~~~l~--~~~v~~i~~--~GG-t~LGssR~~~~~~~~ 81 (320)
T 1pfk_A 17 MNAAIRGVVRSALTEGLEVMGIYDGYLGL-----Y----EDR-MVQLD--RYSVSDMIN--RGG-TFLGSARFPEFRDEN 81 (320)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEESTHHHHH-----H----TTC-EEEEC--SGGGTTCTT--CCS-CTTCCCCCGGGGSHH
T ss_pred HHHHHHHHHHHHHHCCCEEEEEecChHHh-----c----CCC-EEECC--HHHHhhHHh--CCC-CeeccCCCCCCCCHH
Confidence 44455667777778888888887654310 0 000 00000 011222222 222 1222233333422
Q ss_pred --CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEec
Q 028963 120 --TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFST 163 (201)
Q Consensus 120 --t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~ 163 (201)
....+.|++.||+.|++.|-.- -..+|....+.|.+|+-+.
T Consensus 82 ~~~~~~~~l~~~~Id~LvvIGGdg---S~~~a~~L~~~~i~vvgiP 124 (320)
T 1pfk_A 82 IRAVAIENLKKRGIDALVVIGGDG---SYMGAMRLTEMGFPCIGLP 124 (320)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECHH---HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEECCCc---hHHHHHHHHhhCCCEEEEe
Confidence 2455668899999999998763 3567777778899887765
No 286
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=23.62 E-value=96 Score=24.14 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=23.7
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecCC
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
.|+|+|-= ..=+++|..+.++|++|+|++..
T Consensus 6 dvvIIG~G--~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 6 DCIVIGAG--VVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCC--HHHHHHHHHHHhCCCeEEEEeCC
Confidence 56676643 34567889999999999999865
No 287
>3i0p_A Malate dehydrogenase; araerobic parasitic protozoan, amoebic dysentery, ssgcid, NI infectious disease, structural genomics; HET: NAD; 2.60A {Entamoeba histolytica}
Probab=23.58 E-value=72 Score=26.21 Aligned_cols=45 Identities=13% Similarity=0.158 Sum_probs=35.6
Q ss_pred CCeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 22 KSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
...++++||=+++|-. -.....+...++.||++|+-++.+++.+.
T Consensus 79 ~~~a~~~vDg~~g~G~--~~~~~am~~aiekAk~~Gig~v~vrns~H 123 (365)
T 3i0p_A 79 ETSTTCVLDGNNGFGH--VNGTIGMKMAIEKAKKYGMGMVVVRNSTH 123 (365)
T ss_dssp ECSSEEEEECTTCCHH--HHHHHHHHHHHHHHHHHSEEEEEEEEECC
T ss_pred ecCcEEEEECCCCchH--HHHHHHHHHHHHHHHHhCEEEEEEecCCC
Confidence 3568999999998742 22456777899999999999999988765
No 288
>4fn5_A EF-G 1, elongation factor G 1; translation, translation-antibiotic compl; HET: 0UO; 2.90A {Pseudomonas aeruginosa}
Probab=23.51 E-value=67 Score=28.71 Aligned_cols=38 Identities=5% Similarity=-0.000 Sum_probs=28.4
Q ss_pred CCCCeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 20 NPKSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 20 ~~~~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
...+-||||||...+. -.....+++.|.+.++|+|.+-
T Consensus 107 r~~DgavlvVDaveGV-------~~qT~~v~~~a~~~~lp~i~~i 144 (709)
T 4fn5_A 107 RVLDGAVVVFCGTSGV-------EPQSETVWRQANKYGVPRIVYV 144 (709)
T ss_dssp HHCSEEEEEEETTTCS-------CHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHhCeEEEEEECCCCC-------chhHHHHHHHHHHcCCCeEEEE
Confidence 3356799999988874 4566778888888899866654
No 289
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=23.51 E-value=2.9e+02 Score=22.25 Aligned_cols=105 Identities=13% Similarity=-0.042 Sum_probs=62.3
Q ss_pred CccccccccCCCCCCCEEEECCCCCCCCCC----chHHHHHhCC-C---cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 91 DAELLPEIKGLVAGADEVIEKNTYSAFGNT----RLQERLVGMG-V---EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 91 g~~~~~~l~~~~~~~~~vv~K~~~saf~~t----~L~~~L~~~g-i---~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
....+.+++. ..+-+||.-.. +-++.| +|--+.+..| - -+|.++|-.-+.-+.+-+..+...|.+|.++
T Consensus 110 ~~~~~~~lA~--~s~vPVINa~~-~~~HPtQ~LaDl~Ti~e~~g~~l~gl~va~vGD~~~~va~Sl~~~~~~~G~~v~~~ 186 (335)
T 1dxh_A 110 KQEIVEELAK--FAGVPVFNGLT-DEYHPTQMLADVLTMREHSDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIA 186 (335)
T ss_dssp CHHHHHHHHH--HSSSCEEEEEC-SSCCHHHHHHHHHHHHHTCSSCGGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEE
T ss_pred ChhHHHHHHH--hCCCCEEcCCC-CCCCcHHHHHHHHHHHHHcCCCcCCeEEEEecCCccchHHHHHHHHHHcCCEEEEE
Confidence 3344555655 34556776432 444433 3333444455 2 4788899864555567777777899999998
Q ss_pred cCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 163 TDATATSDLELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 163 ~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
.--.-..+++..+.+-+..+..|+.+.-+.++-+++
T Consensus 187 ~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~d~~eav 222 (335)
T 1dxh_A 187 APKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAV 222 (335)
T ss_dssp CCGGGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHT
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCeEEEEeCHHHHh
Confidence 876666666555544444455666655445544443
No 290
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=23.50 E-value=2.8e+02 Score=22.12 Aligned_cols=58 Identities=14% Similarity=0.051 Sum_probs=34.9
Q ss_pred HHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 126 LVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 126 L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+.+.|.++|+-+ -+.|.+ .+.|..+..+|++++++-.... .+ ..-+..|+..|++|+-
T Consensus 80 a~~~g~~~vv~a-SsGN~g-~alA~~a~~~G~~~~i~~p~~~-~~----~~k~~~~~~~GA~v~~ 137 (360)
T 2d1f_A 80 ALAHGQRAVLCA-STGNTS-ASAAAYAARAGITCAVLIPQGK-IA----MGKLAQAVMHGAKIIQ 137 (360)
T ss_dssp HHHTTCSEEEEC-CSSHHH-HHHHHHHHHHTCEEEEEECSSC-CC----HHHHHHHHHTTCEEEE
T ss_pred HHHCCCCEEEEe-CCcHHH-HHHHHHHHHcCCcEEEEEcCCC-CC----HHHHHHHHHcCCEEEE
Confidence 345777666555 566666 6677888889999877765431 11 1223445555666653
No 291
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=23.50 E-value=1.2e+02 Score=23.16 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=25.7
Q ss_pred cEEEEeecc---------------CchhHHHHHHHHHhCCCeEEEecCCC
Q 028963 132 EEVIVCGVM---------------TNLCCETTARDAFVRGFRVFFSTDAT 166 (201)
Q Consensus 132 ~~lvi~G~~---------------T~~CV~~Ta~~a~~~G~~v~vv~Da~ 166 (201)
++++|+|-. +..==.+.|+.+..+|++|+++.--.
T Consensus 4 k~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 4 MKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 467777775 44455577888999999999987543
No 292
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=23.47 E-value=60 Score=20.60 Aligned_cols=21 Identities=24% Similarity=0.312 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHCCCcEEEEe
Q 028963 44 DNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 44 ~~i~~l~~~ar~~g~~vi~~~ 64 (201)
.-..++++.|+++|+||+--.
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~ 47 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDI 47 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECH
T ss_pred HHHHHHHHHHHHcCCCEEeCH
Confidence 344567778999999988653
No 293
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=23.45 E-value=96 Score=23.67 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=15.5
Q ss_pred cEEEEeeccC-chhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMT-NLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T-~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... ..-=.+.++.+.++|++|+++
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~ 53 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFHREGAQLAFT 53 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHcCCEEEEE
Confidence 4555555542 233345555555555555544
No 294
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=23.42 E-value=49 Score=26.42 Aligned_cols=43 Identities=9% Similarity=0.093 Sum_probs=33.3
Q ss_pred hHHHHHhCCCcEEEEeeccCchhHHHHHHHHHh--C-CCeEEEecC
Q 028963 122 LQERLVGMGVEEVIVCGVMTNLCCETTARDAFV--R-GFRVFFSTD 164 (201)
Q Consensus 122 L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~--~-G~~v~vv~D 164 (201)
+.+.+.+.+.++|+++|.-++..+...+...+. . |..+.++.+
T Consensus 16 ~v~~i~~~~~~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~~ 61 (329)
T 3eua_A 16 FLQDLKGKTIDHVFFVACGGSSAIMYPSKYVFDRESKSINSDLYSA 61 (329)
T ss_dssp HHHHHTTCCCCEEEEEECTHHHHTTHHHHHHHHHHCSSCEEEEEEH
T ss_pred HHHHHHHCCCCEEEEEEccHHHHHHHHHHHHHHHhcCCCeEEEEcc
Confidence 345555668999999999999988888877775 3 888887753
No 295
>3e3i_A Carbonic anhydrase 2, beta carbonic anhydrase; allosteric site mutant, lyase, META; 2.00A {Haemophilus influenzae} SCOP: c.53.2.1 PDB: 3e3g_A 2a8d_A 2a8c_A 3e3f_A 3e31_A 3e2x_A 3e2a_A 3e28_A 3e2w_A 3e1w_A 3e1v_A 3e24_A 3mf3_A
Probab=23.41 E-value=2.1e+02 Score=21.81 Aligned_cols=47 Identities=15% Similarity=0.201 Sum_probs=34.8
Q ss_pred CCCCEEEECCCCCCCCCC------chHHHHHhCCCcEEEEeeccCchhHHHHH
Q 028963 103 AGADEVIEKNTYSAFGNT------RLQERLVGMGVEEVIVCGVMTNLCCETTA 149 (201)
Q Consensus 103 ~~~~~vv~K~~~saf~~t------~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta 149 (201)
.++|..+.++--+....+ .|+-.....|+++|+|+|=.-...|.++.
T Consensus 56 ~~Gd~fv~Rnagn~v~~~d~~~~~sleyav~~L~v~~IvV~GHt~CGav~Aa~ 108 (229)
T 3e3i_A 56 EPGELFVHRNVANQVIHTDFNCLSVVQYAVDVLKIEHIIICGHTNCGGIHAAM 108 (229)
T ss_dssp CTTSEEEEEETTCCCCTTCHHHHHHHHHHHHTSCCCEEEEEEESSCHHHHHHH
T ss_pred CCCcEEEEEecccccCCCcchhHHHHHHHHHhcCCCEEEEECCCCCHHHHHHH
Confidence 678988888876666543 34444567899999999988877777653
No 296
>3u5c_A 40S ribosomal protein S0-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_A 3o30_A 3o2z_A 3u5g_A 3jyv_B* 1s1h_B
Probab=23.38 E-value=1e+02 Score=23.91 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=27.2
Q ss_pred eEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccCCC
Q 028963 24 SVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHKSP 70 (201)
Q Consensus 24 ~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~ 70 (201)
.+|+|+|...+. ..+..|+..|+|||...+.+.+|
T Consensus 119 dllvV~Dp~~d~------------~ai~EA~~l~IP~Ial~DTn~~p 153 (252)
T 3u5c_A 119 RLVIVTDPRSDA------------QAIKEASYVNIPVIALTDLDSPS 153 (252)
T ss_dssp SEEEESCTTTTH------------HHHHHHHTTTCCEEEEECTTCCC
T ss_pred ceEEEeCCccch------------HHHHHHHHcCCCEEEEEcCCCCc
Confidence 478999987653 45667889999999998877654
No 297
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=23.35 E-value=1.1e+02 Score=26.32 Aligned_cols=29 Identities=14% Similarity=0.230 Sum_probs=25.5
Q ss_pred chhHHHHHHHHHHHHHHCCCcEEEEeccc
Q 028963 39 AKPILDNTLATVQLCRRASIPVFFTRHCH 67 (201)
Q Consensus 39 ~~~~i~~i~~l~~~ar~~g~~vi~~~~~~ 67 (201)
....-.++.++++.|.+.++|||+..+..
T Consensus 342 ~~~~~~K~ar~i~~a~~~~~Plv~l~ds~ 370 (522)
T 1x0u_A 342 DIDAADKAARFIRFCDAFNIPLISLVDTP 370 (522)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhhCCCCEEEEecCC
Confidence 56678999999999999999999998764
No 298
>1wtj_A Ureidoglycolate dehydrogenase; NADPH dependent enzyme, oxidoreductase; 1.55A {Pseudomonas syringae PV} PDB: 2cwf_A* 2cwh_A*
Probab=23.33 E-value=62 Score=26.35 Aligned_cols=44 Identities=16% Similarity=0.305 Sum_probs=34.8
Q ss_pred CeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 23 SSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
..++++||-+++|-. -.....+..+++.||++|+-++.+++.+.
T Consensus 83 ~~a~~~vDg~~g~G~--~~~~~am~~aiekAk~~Gi~~v~vrns~H 126 (343)
T 1wtj_A 83 GAAFVRVDACNGFAQ--PALAAARSLLIDKARSAGVAILAIRGSHH 126 (343)
T ss_dssp ETTEEEEECTTSBHH--HHHHHHHHHHHHHHHHHSEEEEEEEEEEC
T ss_pred CCcEEEEECCCCcHH--HHHHHHHHHHHHHHHHcCEEEEEEeCCCC
Confidence 467899999998842 22456677889999999999999988765
No 299
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=23.22 E-value=1e+02 Score=23.42 Aligned_cols=31 Identities=19% Similarity=0.343 Sum_probs=16.6
Q ss_pred cEEEEeeccC-chhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMT-NLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T-~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... ..-=.+.++.+.++|++|+++
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~ 38 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCFNQGATLAFT 38 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHHTTTCEEEEE
T ss_pred CEEEEECCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence 4566666542 333345555556666665554
No 300
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=23.21 E-value=98 Score=24.49 Aligned_cols=30 Identities=17% Similarity=0.255 Sum_probs=23.2
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
.|+|+|- -..=+++|..+.++|++|+|++.
T Consensus 5 dvvIIGa--G~~Gl~~A~~La~~G~~V~vie~ 34 (389)
T 2gf3_A 5 DVIVVGA--GSMGMAAGYQLAKQGVKTLLVDA 34 (389)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECC--CHHHHHHHHHHHhCCCeEEEEeC
Confidence 4666663 34556889999999999999975
No 301
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=23.19 E-value=99 Score=21.95 Aligned_cols=62 Identities=16% Similarity=0.110 Sum_probs=38.0
Q ss_pred chHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCC--CHHHHHHHHHHHh
Q 028963 121 RLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATS--DLELHEATLKNLA 182 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~--~~~~h~~al~~l~ 182 (201)
++.+.|+++|++-.++++-........--.-....-|+.++.+|-+... +++....+++.+.
T Consensus 91 ~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg 154 (216)
T 3kbb_A 91 EALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLN 154 (216)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccccccCCCcccHHHHHHHHHhhC
Confidence 5677788899887777765443322211111122237888888877654 5677777777664
No 302
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=23.18 E-value=49 Score=24.38 Aligned_cols=40 Identities=8% Similarity=0.000 Sum_probs=33.4
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+......+.++++.+.++..|+.+|.+..
T Consensus 61 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~ 100 (218)
T 3u5r_E 61 ALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINS 100 (218)
T ss_dssp EEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEEC
T ss_pred eEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 5778888888887778899999999999888888887764
No 303
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=23.15 E-value=2.6e+02 Score=21.64 Aligned_cols=73 Identities=12% Similarity=-0.035 Sum_probs=46.2
Q ss_pred HHHHHhCCCcEEEEeeccCchh-HHHHHHHHHhC--CCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 123 QERLVGMGVEEVIVCGVMTNLC-CETTARDAFVR--GFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 123 ~~~L~~~gi~~lvi~G~~T~~C-V~~Ta~~a~~~--G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
++++.+.|.++|+...++.... -.++|+.|.+. +.+|+|+--.+.+......-.....|...|. +.+|+++.+
T Consensus 55 ~~~~~~~~~d~Ii~I~iSs~LSGTy~sA~~aa~~~~~~~I~ViDS~~~s~g~g~~v~~Aa~l~~~G~---s~eeI~~~l 130 (277)
T 3egl_A 55 ARQLERGGDDGVLALHISXELSSTWSAAVTAAAVFDDDSVRVVDTSSLGMAVGAAAMAAARMAXDGA---SLQECYDIA 130 (277)
T ss_dssp HHHHHHTTTSCEEEECSCTTTCSHHHHHHHHHTTSSTTSEEEECCSCCTHHHHHHHHHHHHHHHTTC---CHHHHHHHH
T ss_pred HHHHHhCCCCcEEEEEeCcchhhhhHHHHHHHHhCCCCCEEEECCCchhHHHHHHHHHHHHHHHcCC---CHHHHHHHH
Confidence 3455556788899888877543 33556555543 5689998887777765555555555555553 566665544
No 304
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=23.05 E-value=3.2e+02 Score=22.57 Aligned_cols=60 Identities=10% Similarity=-0.072 Sum_probs=41.8
Q ss_pred CCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC---CCCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 130 GVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA---TATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 130 gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da---~~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
..++++|+|----.| ..|..+.++|.+|+++.-. ....+++..+...+.++..+.++...
T Consensus 184 ~~~~vvViGgG~ig~--E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~ 246 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGI--ELAGVFHGLGSETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKL 246 (479)
T ss_dssp CCSEEEEECSSHHHH--HHHHHHHHTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred cCCeEEEECCCHHHH--HHHHHHHHcCCceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeC
Confidence 357888888654333 3455666789999999754 34567777777778888777776654
No 305
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=23.03 E-value=83 Score=21.99 Aligned_cols=41 Identities=7% Similarity=0.048 Sum_probs=32.5
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCC------cEEEEecc
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASI------PVFFTRHC 66 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~------~vi~~~~~ 66 (201)
.++|++...+|+......+.++++.+..+..|+ .++.+...
T Consensus 61 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d 107 (183)
T 3lwa_A 61 VVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVR 107 (183)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECS
T ss_pred EEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECC
Confidence 567778888888778889999999999999888 77777543
No 306
>3onp_A TRNA/RRNA methyltransferase (SPOU); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.90A {Rhodobacter sphaeroides}
Probab=23.02 E-value=2.2e+02 Score=21.79 Aligned_cols=64 Identities=11% Similarity=-0.021 Sum_probs=44.8
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHH---HHHhhcceE-EeeHHHHHHhh
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGF-RVFFSTDATATSDLELHEATL---KNLAYGFAY-LFDCERLEAGL 198 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~-~v~vv~Da~~~~~~~~h~~al---~~l~~~~~~-v~~~~e~~~~l 198 (201)
.||+.++....=+.+-+|.+...|+ +++++..++.-.+++....+. ..+. .+. +-+.+++++.+
T Consensus 6 ~vVL~~~~dP~NiGai~Rta~a~G~~~l~Lv~p~~~~~~~~a~~~a~GA~~~l~--~~~~~~~l~eal~~~ 74 (249)
T 3onp_A 6 VFILVRPQMGENIGAAARAMLNFGLGRLRIVDPRDGWPNPKAVAMASGAGRLLD--HAGLFPTVAEAIRDC 74 (249)
T ss_dssp EEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCTTCSSCHHHHHHHGGGHHHHH--TCEEESSHHHHHTTC
T ss_pred EEEEeCCCCCChHHHHHHHHHHcCCCEEEEeCCCcCCCcHHHHHHcCCccccCc--eEEEeCCHHHHHHhC
Confidence 6899999999999999999999998 688888776555665544332 1222 233 35677776543
No 307
>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A
Probab=22.99 E-value=89 Score=23.36 Aligned_cols=39 Identities=15% Similarity=0.350 Sum_probs=31.1
Q ss_pred EEEEeccCccCCCchh-HHHHHHHHHHHHHHCCCcEEEEe
Q 028963 26 LLVIDMQNHFSSIAKP-ILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~-~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
||+.||=.-+++.... +-+...+.++.+++.|++++.+.
T Consensus 4 li~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~~~iaT 43 (261)
T 2rbk_A 4 ALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIAT 43 (261)
T ss_dssp EEEECSBTTTBCTTTSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCCCCCcCCCCCcCCHHHHHHHHHHHHCCCEEEEEC
Confidence 7899999888876555 66777888888899999887764
No 308
>1ekj_A Beta-carbonic anhydrase; rossman fold domain, strand exchange, lyase; HET: CIT; 1.93A {Pisum sativum} SCOP: c.53.2.1
Probab=22.91 E-value=2.1e+02 Score=21.39 Aligned_cols=47 Identities=9% Similarity=0.105 Sum_probs=33.5
Q ss_pred CCCCEEEECCCCCCCCC----------CchHHHHHhCCCcEEEEeeccCchhHHHHH
Q 028963 103 AGADEVIEKNTYSAFGN----------TRLQERLVGMGVEEVIVCGVMTNLCCETTA 149 (201)
Q Consensus 103 ~~~~~vv~K~~~saf~~----------t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta 149 (201)
.++|..+.++--+.... ..|+-.....|+++|+|+|=.-..-|.++.
T Consensus 66 ~pGdlFVvRNaGN~V~~~d~~~~~~~~asleyAv~~L~v~~IvV~GHs~CGav~Aa~ 122 (221)
T 1ekj_A 66 QPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLL 122 (221)
T ss_dssp CTTSEEEEEEGGGCCCCSCTTTCHHHHHHHHHHHHTSCCSEEEEEEESSCHHHHHHH
T ss_pred CCCcEEEEeccCcccCcccccccchhHHHHHHHHHhcCCCEEEEEccCCCCceeeec
Confidence 67888888875444332 135566677999999999998777776553
No 309
>3ucj_A Carbonic anhydrase; alpha/beta, strand exchange, lyase-lyase inhibitor complex; HET: AZM; 1.85A {Coccomyxa SP} PDB: 3uck_A 3ucm_A 3ucn_A 3uco_A
Probab=22.90 E-value=2.3e+02 Score=21.44 Aligned_cols=47 Identities=17% Similarity=0.363 Sum_probs=35.5
Q ss_pred CCCCEEEECCCCCCCCCCc------hHHHHHhCCCcEEEEeeccCchhHHHHH
Q 028963 103 AGADEVIEKNTYSAFGNTR------LQERLVGMGVEEVIVCGVMTNLCCETTA 149 (201)
Q Consensus 103 ~~~~~vv~K~~~saf~~t~------L~~~L~~~gi~~lvi~G~~T~~CV~~Ta 149 (201)
.++|..+.++--+....++ |+-.....|+++|+|+|=.-...|.++.
T Consensus 61 ~~Gd~fv~Rnagn~v~~~d~~~~~sleyav~~L~v~~IvV~GHt~CGav~Aa~ 113 (227)
T 3ucj_A 61 APGEVFVQRNVGNLVSNKDLNCMSCLEYTVDHLKIKHILVCGHYNCGACKAGL 113 (227)
T ss_dssp CTTSEEEEEETTCCCCTTCHHHHHHHHHHHHTSCCSEEEEEEETTCHHHHHHH
T ss_pred CCCCEEEEEecccccCCcchhHHHHHHHHHHhcCCCEEEEECCCCCHHHHHhh
Confidence 6789888888766664432 3334567899999999998888887765
No 310
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=22.80 E-value=1.2e+02 Score=21.46 Aligned_cols=60 Identities=13% Similarity=0.142 Sum_probs=41.3
Q ss_pred CchHHHHHhCCCcEEEEeeccCch--hHHHHHHHHHhC-CCeEEEecCCCCCCCHHHHHHHHHH
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNL--CCETTARDAFVR-GFRVFFSTDATATSDLELHEATLKN 180 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~--CV~~Ta~~a~~~-G~~v~vv~Da~~~~~~~~h~~al~~ 180 (201)
.-|..+|++.|++-.. .++..|- -+..+...+.+. ++++++.+=.++-...+....+++.
T Consensus 24 ~~l~~~l~~~G~~v~~-~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g~~D~t~ea~~~ 86 (164)
T 2is8_A 24 LAIREVLAGGPFEVAA-YELVPDEPPMIKKVLRLWADREGLDLILTNGGTGLAPRDRTPEATRE 86 (164)
T ss_dssp HHHHHHHTTSSEEEEE-EEEECSCHHHHHHHHHHHHHTSCCSEEEEESCCSSSTTCCHHHHHHT
T ss_pred HHHHHHHHHCCCeEeE-EEEcCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCCCCCChHHHHHH
Confidence 4688899999975433 3443332 566677777776 7999999999887765555555554
No 311
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=22.77 E-value=2e+02 Score=22.63 Aligned_cols=55 Identities=20% Similarity=0.214 Sum_probs=43.8
Q ss_pred CCCCCCCCCCchHHHHHhCCCcEEEEee-------ccCchhHHHHHHHHHhCCCeEEEecCC
Q 028963 111 KNTYSAFGNTRLQERLVGMGVEEVIVCG-------VMTNLCCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 111 K~~~saf~~t~L~~~L~~~gi~~lvi~G-------~~T~~CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
....++|++.--...|++.|++.++|-= -.||.-|..-+..|.+.|..+++...=
T Consensus 87 ~~~~GAfTGEIS~~mLkd~G~~~ViiGHSERR~~f~Etde~V~~Kv~~Al~~GL~pI~CvGE 148 (275)
T 1mo0_A 87 KVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVVFCIGE 148 (275)
T ss_dssp SSSSBSCTTCCCHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCCccCcCCHHHHHHcCCCEEEeCchhhhcccCCCHHHHHHHHHHHHHCCCEEEEEcCC
Confidence 3457889888888999999999887641 267888888999999999999985443
No 312
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=22.74 E-value=1.2e+02 Score=23.47 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=16.5
Q ss_pred cEEEEeeccCc-hhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTN-LCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~-~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|.... .-=.+.|+.+.++|++|+++
T Consensus 32 k~~lVTGasg~~GIG~aia~~la~~G~~V~~~ 63 (293)
T 3grk_A 32 KRGLILGVANNRSIAWGIAKAAREAGAELAFT 63 (293)
T ss_dssp CEEEEECCCSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEE
Confidence 45666665542 22345555556666665554
No 313
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=22.73 E-value=1e+02 Score=24.36 Aligned_cols=31 Identities=13% Similarity=-0.030 Sum_probs=23.7
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecCC
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
.|+|+|-- ..=+++|..+.++|++|+|++..
T Consensus 19 dvvIIGgG--~~Gl~~A~~La~~G~~V~llE~~ 49 (382)
T 1ryi_A 19 EAVVIGGG--IIGSAIAYYLAKENKNTALFESG 49 (382)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECcC--HHHHHHHHHHHhCCCcEEEEeCC
Confidence 57777733 45567888899999999999864
No 314
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=22.67 E-value=68 Score=21.18 Aligned_cols=40 Identities=8% Similarity=-0.003 Sum_probs=31.5
Q ss_pred EEEEeccCccCCCchhHHHHHHH---HHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLA---TVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~---l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+......+.+.+ +.+.++..++.++.+..
T Consensus 29 ~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~ 71 (142)
T 3ewl_A 29 YTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYP 71 (142)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEEC
T ss_pred EEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEe
Confidence 67888888888877777777777 88888888888887753
No 315
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=22.62 E-value=1e+02 Score=21.33 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=22.7
Q ss_pred hHHHHHhCCCcEEEE-ee---ccCchhHHHHHHHHHhCCC---eEEEecCC
Q 028963 122 LQERLVGMGVEEVIV-CG---VMTNLCCETTARDAFVRGF---RVFFSTDA 165 (201)
Q Consensus 122 L~~~L~~~gi~~lvi-~G---~~T~~CV~~Ta~~a~~~G~---~v~vv~Da 165 (201)
|...|...+.+.||+ |+ .....+....+..+...|| +|.++...
T Consensus 59 l~~~l~~~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG 109 (152)
T 2j6p_A 59 LAKTLFEEKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGG 109 (152)
T ss_dssp HHHHHHHTTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTH
T ss_pred HHHHhcccCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCc
Confidence 455555556566666 63 2222222222244556787 67777643
No 316
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.60 E-value=2.7e+02 Score=22.84 Aligned_cols=59 Identities=17% Similarity=-0.064 Sum_probs=39.8
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC---CCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT---ATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~---~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|--.-.| ..|..+.++|.+|++++-.- ...+++..+...+.++..+.++...
T Consensus 171 ~~~vvViGgG~~g~--e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 232 (458)
T 1lvl_A 171 PQHLVVVGGGYIGL--ELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLG 232 (458)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHHHTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETT
T ss_pred CCeEEEECcCHHHH--HHHHHHHHCCCeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEEC
Confidence 47888888654444 34556667899999997442 3346777777777777777766543
No 317
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=22.50 E-value=2.1e+02 Score=21.59 Aligned_cols=20 Identities=20% Similarity=0.353 Sum_probs=8.9
Q ss_pred CCchHHHHHhCCCcEEEEeec
Q 028963 119 NTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~ 139 (201)
+..+...|.++|. +|++++-
T Consensus 43 G~aia~~l~~~G~-~Vi~~~r 62 (281)
T 3ppi_A 43 GEATVRRLHADGL-GVVIADL 62 (281)
T ss_dssp HHHHHHHHHHTTC-EEEEEES
T ss_pred HHHHHHHHHHCCC-EEEEEeC
Confidence 3444445544554 2444433
No 318
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=22.49 E-value=74 Score=23.41 Aligned_cols=40 Identities=3% Similarity=0.014 Sum_probs=34.1
Q ss_pred EEEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++. ..|++.....++.++++.+.+++.++.||.+..
T Consensus 54 ~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 94 (213)
T 2i81_A 54 YVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSV 94 (213)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEES
T ss_pred eEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 4788888 788988888899999999999888998888864
No 319
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima} SCOP: c.14.1.4 c.14.1.4
Probab=22.47 E-value=94 Score=26.88 Aligned_cols=44 Identities=11% Similarity=0.150 Sum_probs=31.7
Q ss_pred CCCeEEEEEeccCccCC--CchhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 21 PKSSVLLVIDMQNHFSS--IAKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 21 ~~~~aLlviD~Q~~f~~--~~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
....+++..| ..|.. .....-+++.++.+.|.+.++|+|+..+.
T Consensus 97 Gr~v~v~a~D--~t~~gGS~g~~~~~Ki~r~~e~A~~~~lPvI~l~dS 142 (527)
T 1vrg_A 97 GRKVAVFSQD--FTVMGGSLGEMHAKKIVKLLDLALKMGIPVIGINDS 142 (527)
T ss_dssp TEEEEEEEEC--TTTGGGCBCHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred CEEEEEEEEe--ccccCccccHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 3344444444 33433 25678899999999999999999999875
No 320
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=22.41 E-value=2.7e+02 Score=21.40 Aligned_cols=58 Identities=10% Similarity=0.012 Sum_probs=37.8
Q ss_pred cEEEEeeccCchhH-HHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 132 EEVIVCGVMTNLCC-ETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 132 ~~lvi~G~~T~~CV-~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+-+|+||---|..- +..|+.+..+||+|.|+.=.-.... +.....++.++..++.+.+
T Consensus 87 ~vlVlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~-~~a~~~~~~~~~~g~~~~~ 145 (259)
T 3d3k_A 87 TVALLCGPHVKGAQGISCGRHLANHDVQVILFLPNFVKML-ESITNELSLFSKTQGQQVS 145 (259)
T ss_dssp EEEEEECSSHHHHHHHHHHHHHHHTTCEEEEECCBCSSCC-HHHHHHHHHHTTSSCEEES
T ss_pred eEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEecCCCCC-HHHHHHHHHHHHcCCCccc
Confidence 56899996555544 5888999999999988743211222 3345566777666665543
No 321
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=22.40 E-value=2.4e+02 Score=21.00 Aligned_cols=30 Identities=13% Similarity=0.102 Sum_probs=17.3
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... .-=.+.++.+.++|++|+++
T Consensus 9 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 38 (259)
T 4e6p_A 9 KSALITGSAR-GIGRAFAEAYVREGATVAIA 38 (259)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 4666666443 33345566666667766654
No 322
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=22.32 E-value=40 Score=22.91 Aligned_cols=40 Identities=5% Similarity=0.054 Sum_probs=33.0
Q ss_pred EEEEeccCccCCCchh-HHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKP-ILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~-~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+.... ..+.+.++.+..+..|+.++.+..
T Consensus 32 ~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~ 72 (160)
T 3lor_A 32 VVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHS 72 (160)
T ss_dssp EEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEEC
T ss_pred EEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEec
Confidence 6788898889988777 699999999988877887777754
No 323
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.32 E-value=3.4e+02 Score=22.59 Aligned_cols=59 Identities=5% Similarity=-0.037 Sum_probs=42.3
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC---CCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT---ATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~---~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|--.-.| ..|..+.++|.+|++++-.- ...+++..+...+.++..+.++.+.
T Consensus 176 ~~~vvViGgG~ig~--E~A~~l~~~g~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~ 237 (500)
T 1onf_A 176 SKKIGIVGSGYIAV--ELINVIKRLGIDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTF 237 (500)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHTTTCEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECS
T ss_pred CCeEEEECChHHHH--HHHHHHHHcCCeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEEC
Confidence 67899988654433 34555677899999997542 3457788888888888888777654
No 324
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=22.31 E-value=3.2e+02 Score=22.26 Aligned_cols=95 Identities=13% Similarity=0.043 Sum_probs=57.6
Q ss_pred CccccccccCCCCCCCEEEECCCCCCCCCC----chHHHHHhC--C----CcEEEEeeccCchhHHHHHHHHHhCCCeEE
Q 028963 91 DAELLPEIKGLVAGADEVIEKNTYSAFGNT----RLQERLVGM--G----VEEVIVCGVMTNLCCETTARDAFVRGFRVF 160 (201)
Q Consensus 91 g~~~~~~l~~~~~~~~~vv~K~~~saf~~t----~L~~~L~~~--g----i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~ 160 (201)
....+.++.. ...-+||+-.. +.++.| +|--+.+.. | -.+|.++|-- +.-+.+-+..+...|.++.
T Consensus 106 ~~~~~~~lA~--~~~vPVINag~-~~~HPtQaLaDl~TI~E~~~~G~~l~glkva~vGD~-~rva~Sl~~~~~~~G~~v~ 181 (355)
T 4a8p_A 106 RHHSIVDLAN--CATIPVINGMS-DYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDA-TQVCFSLGLITTKMGMNFV 181 (355)
T ss_dssp SHHHHHHHHH--HCSSCEEECCC-SSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESCC-CHHHHHHHHHHHHTTCEEE
T ss_pred cHHHHHHHHH--hCCCCEEeCCC-CCCCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCC-chhHHHHHHHHHHcCCEEE
Confidence 3344555555 34556676543 444433 233333444 4 2488899987 6667777888888999999
Q ss_pred EecCCCCCCCHHHHHHHHHHHhhcceEEe
Q 028963 161 FSTDATATSDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 161 vv~Da~~~~~~~~h~~al~~l~~~~~~v~ 189 (201)
++.--.-..+++..+.+-+.....|+.+.
T Consensus 182 ~~~P~~~~p~~~~~~~~~~~a~~~G~~v~ 210 (355)
T 4a8p_A 182 HFGPEGFQLNEEHQAKLAKNCEVSGGSFL 210 (355)
T ss_dssp EECCTTSSCCHHHHHHHHHHHHHHSCEEE
T ss_pred EECCCccCCCHHHHHHHHHHHHHcCCeEE
Confidence 98876666666655555544444554443
No 325
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=22.31 E-value=2.3e+02 Score=21.24 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=9.5
Q ss_pred CCchHHHHHhCCCcEEEEeec
Q 028963 119 NTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~ 139 (201)
+..+...|.++|. +|++++-
T Consensus 42 G~~la~~l~~~G~-~V~~~~r 61 (271)
T 4iin_A 42 GAEIAKTLASMGL-KVWINYR 61 (271)
T ss_dssp HHHHHHHHHHTTC-EEEEEES
T ss_pred HHHHHHHHHHCCC-EEEEEeC
Confidence 4455555555554 2444443
No 326
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=22.30 E-value=1.9e+02 Score=20.26 Aligned_cols=62 Identities=16% Similarity=0.255 Sum_probs=36.4
Q ss_pred chHHHHHhCCCcEEEEeeccCchh-HHHHHHHHHhC--CCeEEEecCC------CCCCCHHHHHHHHHHHh
Q 028963 121 RLQERLVGMGVEEVIVCGVMTNLC-CETTARDAFVR--GFRVFFSTDA------TATSDLELHEATLKNLA 182 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~G~~T~~C-V~~Ta~~a~~~--G~~v~vv~Da------~~~~~~~~h~~al~~l~ 182 (201)
++.+.|+++|++-.++++-..... .....+..+.. -|..++.++- +.-.+++..+.+++.+.
T Consensus 41 ~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~ 111 (189)
T 3ib6_A 41 ETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQ 111 (189)
T ss_dssp HHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcC
Confidence 566778889999888888765211 11222222222 2456666653 23346777777877764
No 327
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=22.30 E-value=67 Score=23.03 Aligned_cols=40 Identities=13% Similarity=0.025 Sum_probs=33.8
Q ss_pred EEEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++. ..|++.....++.++++.+.++..++.+|.+..
T Consensus 36 ~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~ 76 (197)
T 1qmv_A 36 YVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSV 76 (197)
T ss_dssp EEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEES
T ss_pred eEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 4788888 889988888889999999998888888888864
No 328
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=22.23 E-value=67 Score=23.78 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=33.8
Q ss_pred EEEEeccC-ccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQN-HFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~-~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++.. .+++.....++.++++.+.++..|+.||.+..
T Consensus 71 ~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~ 111 (222)
T 3ztl_A 71 YVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACST 111 (222)
T ss_dssp EEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEES
T ss_pred eEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 46778885 88888888899999999999988988888864
No 329
>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10
Probab=22.22 E-value=97 Score=23.62 Aligned_cols=39 Identities=15% Similarity=0.268 Sum_probs=30.5
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
||+.||=.-+++....+.+...+.++.+++.|++++.+.
T Consensus 6 li~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT 44 (288)
T 1nrw_A 6 LIAIDLDGTLLNSKHQVSLENENALRQAQRDGIEVVVST 44 (288)
T ss_dssp EEEEECCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEe
Confidence 899999988887655566667777888889999887653
No 330
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=22.19 E-value=97 Score=24.53 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCC---CCccccccccCCCCCCCEEEECCCCC-CC
Q 028963 42 ILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGT---ADAELLPEIKGLVAGADEVIEKNTYS-AF 117 (201)
Q Consensus 42 ~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~g~~~~~~l~~~~~~~~~vv~K~~~s-af 117 (201)
+.+.+..|.+.+++.|+|++-..+...... .+... ......|+ ...+++.++.. -+-+|+-|+..+ ..
T Consensus 76 ~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~---~l~~~--vd~lqIgA~~~~n~~LLr~va~---~gkPVilK~G~~~t~ 147 (285)
T 3sz8_A 76 LDEGLKIFAEVKARFGVPVITDVHEAEQAA---PVAEI--ADVLQVPAFLARQTDLVVAIAK---AGKPVNVKKPQFMSP 147 (285)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEECCSGGGHH---HHHTT--CSEEEECGGGTTCHHHHHHHHH---TSSCEEEECCTTSCG
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeCCHHHHH---HHHHh--CCEEEECccccCCHHHHHHHHc---cCCcEEEeCCCCCCH
Confidence 345666677777788888776655433211 01000 00112222 22235555554 345677777654 22
Q ss_pred CC-CchHHHHHhCCCcEEEEe--ec----cC---chhHHHHHHHHHhCCCeEEEecCCC
Q 028963 118 GN-TRLQERLVGMGVEEVIVC--GV----MT---NLCCETTARDAFVRGFRVFFSTDAT 166 (201)
Q Consensus 118 ~~-t~L~~~L~~~gi~~lvi~--G~----~T---~~CV~~Ta~~a~~~G~~v~vv~Da~ 166 (201)
.. -.-.+++++.|.++|+|+ |. .+ |.-...+.+..+ .|+.|.+-+|=+
T Consensus 148 ~ei~~ave~i~~~Gn~~i~L~erg~~y~~~~~~vdl~~i~~lk~~~-~~~pV~~D~sHs 205 (285)
T 3sz8_A 148 TQLKHVVSKCGEVGNDRVMLCERGSSFGYDNLVVDMLGFRQMAETT-GGCPVIFDVTHS 205 (285)
T ss_dssp GGTHHHHHHHHHTTCCCEEEEECCEECSSSCEECCTTHHHHHHHHT-TSCCEEEETTTT
T ss_pred HHHHHHHHHHHHcCCCcEEEEeCCCCCCCCcCccCHHHHHHHHHhC-CCCCEEEeCCCc
Confidence 11 234567788899999997 33 33 233333433332 267777744443
No 331
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=22.16 E-value=95 Score=23.61 Aligned_cols=44 Identities=9% Similarity=0.038 Sum_probs=35.4
Q ss_pred CCCeEEEEEeccCccCCCch-hHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 21 PKSSVLLVIDMQNHFSSIAK-PILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 21 ~~~~aLlviD~Q~~f~~~~~-~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
.++.=||+.|+=--+++... .+.+...+.++.+++.|+.++.+.
T Consensus 18 ~~~~kli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~G~~v~iaT 62 (283)
T 3dao_A 18 QGMIKLIATDIDGTLVKDGSLLIDPEYMSVIDRLIDKGIIFVVCS 62 (283)
T ss_dssp -CCCCEEEECCBTTTBSTTCSCCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred ccCceEEEEeCcCCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc
Confidence 34445999999999887665 677888899999999999888775
No 332
>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A
Probab=22.14 E-value=94 Score=23.34 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=33.4
Q ss_pred EEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 25 VLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 25 aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
=+|+.|+=.-+++....+.+...+.++.+++.|+.++.+.
T Consensus 6 kli~fDlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT 45 (279)
T 4dw8_A 6 KLIVLDLDGTLTNSKKEISSRNRETLIRIQEQGIRLVLAS 45 (279)
T ss_dssp CEEEECCCCCCSCTTSCCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred eEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCEEEEEc
Confidence 3899999998888766777888888889999999887775
No 333
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Roseobacter denitrificans}
Probab=22.09 E-value=1e+02 Score=26.67 Aligned_cols=28 Identities=7% Similarity=0.100 Sum_probs=25.1
Q ss_pred chhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 39 AKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 39 ~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
.....+++.++.+.|.+.++|+|+..+.
T Consensus 122 g~~~~~Ki~ra~e~A~~~~lPvI~l~dS 149 (531)
T 3n6r_B 122 SETHSKKICKIMDMAMQNGAPVIGINDS 149 (531)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cHHHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 5677899999999999999999999865
No 334
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=22.06 E-value=2.5e+02 Score=21.03 Aligned_cols=118 Identities=7% Similarity=-0.026 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCccccccccCCCCCCCEEEECCCCCCCCCCchH
Q 028963 44 DNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGNTRLQ 123 (201)
Q Consensus 44 ~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~t~L~ 123 (201)
.-+..+-++++++|..++...... .. ...++...+.. ..-|-+|.-... .+....
T Consensus 27 ~~~~gi~~~a~~~g~~~~~~~~~~--~~------------------~~~~~~~~l~~--~~vdGiIi~~~~---~~~~~~ 81 (294)
T 3qk7_A 27 EMISWIGIELGKRGLDLLLIPDEP--GE------------------KYQSLIHLVET--RRVDALIVAHTQ---PEDFRL 81 (294)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEECT--TC------------------CCHHHHHHHHH--TCCSEEEECSCC---SSCHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCC--hh------------------hHHHHHHHHHc--CCCCEEEEeCCC---CChHHH
Confidence 334445567788898877765321 10 11133444433 333444432221 123556
Q ss_pred HHHHhCCCcEEEEeecc-----------CchhHHHHHHHHHhCCCe-EEEecCCCCCC-CHHHHHHHHHHHhhcce
Q 028963 124 ERLVGMGVEEVIVCGVM-----------TNLCCETTARDAFVRGFR-VFFSTDATATS-DLELHEATLKNLAYGFA 186 (201)
Q Consensus 124 ~~L~~~gi~~lvi~G~~-----------T~~CV~~Ta~~a~~~G~~-v~vv~Da~~~~-~~~~h~~al~~l~~~~~ 186 (201)
+.|.+.|+.-|++-... -.......+..+.++|++ +.++....... ..+..+...+.++..+.
T Consensus 82 ~~l~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 157 (294)
T 3qk7_A 82 QYLQKQNFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELGHQRIAFVSTDARISYVDQRLQGYVQTMSEAGL 157 (294)
T ss_dssp HHHHHTTCCEEEESCCCCSSCCEEEEECHHHHHHHHHHHHHHTTCCCEEEEEESSCCHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHhCCCCEEEECCCCCCCCCCEEEcChHHHHHHHHHHHHHCCCceEEEEeCCcccchHHHHHHHHHHHHHHCCC
Confidence 77788888766654321 111233455566778876 44443322221 22333444455555443
No 335
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=22.06 E-value=2.4e+02 Score=21.38 Aligned_cols=23 Identities=9% Similarity=0.192 Sum_probs=10.9
Q ss_pred CCCCCCchHHHHHhCCCcEEEEee
Q 028963 115 SAFGNTRLQERLVGMGVEEVIVCG 138 (201)
Q Consensus 115 saf~~t~L~~~L~~~gi~~lvi~G 138 (201)
+.+-+..+...|.+.|.+ |++++
T Consensus 35 sggiG~~la~~L~~~G~~-V~~~~ 57 (302)
T 1w6u_A 35 GTGLGKGMTTLLSSLGAQ-CVIAS 57 (302)
T ss_dssp TSHHHHHHHHHHHHTTCE-EEEEE
T ss_pred CchHHHHHHHHHHHCCCE-EEEEe
Confidence 334444555555555542 44443
No 336
>1pix_A Glutaconyl-COA decarboxylase A subunit; biotin-dependent ION pump, carboxyltransferase, lyase; 2.20A {Acidaminococcus fermentans} SCOP: c.14.1.4 c.14.1.4
Probab=22.01 E-value=86 Score=27.58 Aligned_cols=28 Identities=11% Similarity=0.320 Sum_probs=25.1
Q ss_pred chhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 39 AKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 39 ~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
.....+++.++.+.|.+.++|+|+..+.
T Consensus 122 g~~~~~Ki~r~~e~A~~~~lPvI~l~dS 149 (587)
T 1pix_A 122 VPGQAECLLRASDTAKTLHVPLVYVLNC 149 (587)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEEeC
Confidence 5678999999999999999999999864
No 337
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=21.99 E-value=96 Score=26.41 Aligned_cols=45 Identities=11% Similarity=0.172 Sum_probs=34.4
Q ss_pred CeEEEEEeccCccCCC--chhHHHHHHHHHHHHHHCCCcEEEEeccc
Q 028963 23 SSVLLVIDMQNHFSSI--AKPILDNTLATVQLCRRASIPVFFTRHCH 67 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~--~~~~i~~i~~l~~~ar~~g~~vi~~~~~~ 67 (201)
++-+||+|.-+.+... .......+.++++.+++.|..||++.+..
T Consensus 371 ~p~llilDp~~~Ld~~~~~~~~~~~i~~ll~~l~~~g~tvilvsh~~ 417 (525)
T 1tf7_A 371 KPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSD 417 (525)
T ss_dssp CCSEEEEECHHHHTSSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred CCCEEEEcChHHHHhhCChHHHHHHHHHHHHHHHhCCCEEEEEECcc
Confidence 4569999976665543 22367778888899999999999998875
No 338
>3eyx_A Carbonic anhydrase; rossmann fold, cytoplasm, lyase, metal-binding, nucleus, zinc; 2.04A {Saccharomyces cerevisiae}
Probab=21.99 E-value=1.9e+02 Score=21.71 Aligned_cols=47 Identities=19% Similarity=0.201 Sum_probs=34.8
Q ss_pred CCCCEEEECCCCCCCCCC------chHHHHHhCCCcEEEEeeccCchhHHHHH
Q 028963 103 AGADEVIEKNTYSAFGNT------RLQERLVGMGVEEVIVCGVMTNLCCETTA 149 (201)
Q Consensus 103 ~~~~~vv~K~~~saf~~t------~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta 149 (201)
.++|..+.++--+..... .|+-.+...|+++|+|+|=.-...|.++.
T Consensus 65 ~~Gd~fv~Rn~gn~v~~~d~~~~~sleyav~~L~v~~IvV~GHt~CG~V~Aal 117 (216)
T 3eyx_A 65 LPGEVFTWKNVANICHSEDLTLKATLEFAIICLKVNKVIICGHTDCGGIKTCL 117 (216)
T ss_dssp CTTSEEEEEEGGGCCCTTCHHHHHHHHHHHHTTCCSEEEEEEESSCHHHHHHH
T ss_pred CCCcEEEEEecccccCCccchHHHHHHHHHHhcCCCEEEEEcCCCcHHHHHHH
Confidence 678988888866666443 34445667999999999988877777654
No 339
>4h8a_A Ureidoglycolate dehydrogenase; rossmann fold, oxidoreductase; HET: NAI; 1.64A {Escherichia coli} PDB: 4fju_A* 4fjs_A* 1xrh_A
Probab=21.96 E-value=75 Score=25.82 Aligned_cols=44 Identities=5% Similarity=0.014 Sum_probs=34.8
Q ss_pred CeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 23 SSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 23 ~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
..+++++|=+++|-. -.....+..+++.||++|+-++.+++.+.
T Consensus 75 ~~a~~~vDg~~g~G~--~~~~~am~~aiekAk~~Gig~v~vrns~H 118 (339)
T 4h8a_A 75 GPCSAILHADNAAGQ--VAAKMGMEHAIKTAQQNGVAVVGISRMGH 118 (339)
T ss_dssp ETTEEEEECTTCCHH--HHHHHHHHHHHHHHHHHSEEEEEEEEECC
T ss_pred cCcEEEEECCCCchH--HHHHHHHHHHHHHHHHhCEEEEEEecCCC
Confidence 467899999998742 22355777889999999999999988765
No 340
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A {Sulfolobus tokodaii}
Probab=21.90 E-value=1e+02 Score=26.56 Aligned_cols=28 Identities=11% Similarity=0.169 Sum_probs=25.0
Q ss_pred chhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 39 AKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 39 ~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
+...-+++.++++.|.+.++|+|+..+.
T Consensus 108 g~~~~~Ki~ra~e~A~~~~~P~I~l~~S 135 (522)
T 1x0u_A 108 GETHANKIVRAYELALKVGAPVVGINDS 135 (522)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred cHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5678899999999999999999999864
No 341
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=21.87 E-value=2.5e+02 Score=20.94 Aligned_cols=30 Identities=20% Similarity=0.081 Sum_probs=15.2
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|... .-=.+.++...++|++|+++
T Consensus 9 k~~lVTGas~-GIG~aia~~l~~~G~~V~~~ 38 (265)
T 3lf2_A 9 AVAVVTGGSS-GIGLATVELLLEAGAAVAFC 38 (265)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 4555555443 23344555555566665543
No 342
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=21.81 E-value=3.1e+02 Score=21.91 Aligned_cols=140 Identities=11% Similarity=0.061 Sum_probs=78.1
Q ss_pred hhHHHHHHHHHHHHHHCCCcEEEEecccCCCCCccccccccCCCccccCCCCccccccccCCCCCCCEEEECCCCCCCCC
Q 028963 40 KPILDNTLATVQLCRRASIPVFFTRHCHKSPADYGMLGEWWNGDLVYDGTADAELLPEIKGLVAGADEVIEKNTYSAFGN 119 (201)
Q Consensus 40 ~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~l~~~~~~~~~vv~K~~~saf~~ 119 (201)
...++++.++++.|++.|+|++.-...++...+ ....-.... .+. ....+..+|-. ...+.+.|..|.
T Consensus 159 ~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg--~v~~~~dp~-~Va--~aaRiAaELGA---Ds~~tivK~~y~---- 226 (307)
T 3fok_A 159 APTLEATAHAVNEAAAAQLPIMLEPFMSNWVNG--KVVNDLSTD-AVI--QSVAIAAGLGN---DSSYTWMKLPVV---- 226 (307)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETT--EEEECCSHH-HHH--HHHHHHHTCSS---CCSSEEEEEECC----
T ss_pred HHHHHHHHHHHHHHHHcCCcEEEEeeccccCCC--CcCCCCCHH-HHH--HHHHHHHHhCC---CcCCCEEEeCCc----
Confidence 467999999999999999998775322211000 000000000 000 00011222222 223456666554
Q ss_pred CchHHHHHhCCCcEEEEeecc--CchhHHHHHHHHHh-CCCeEEEecCCCCC---CCHHHHHHHHHHHhhcceEEeeH
Q 028963 120 TRLQERLVGMGVEEVIVCGVM--TNLCCETTARDAFV-RGFRVFFSTDATAT---SDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~--T~~CV~~Ta~~a~~-~G~~v~vv~Da~~~---~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++..+...+.-|+..|-. ++--.+..+.++.+ .|-.=.++--.+.- -++...-.++..+-..-.+..++
T Consensus 227 e~f~~Vv~a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ~~~~dp~~~v~al~~iVH~~~~~~~~ 304 (307)
T 3fok_A 227 EEMERVMESTTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLYPQDGDVAAAVDTAARLVHTDIQQFTS 304 (307)
T ss_dssp TTHHHHGGGCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSSCSSSCHHHHHHHHHHHHCCCC-----
T ss_pred HHHHHHHHhCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhccCCCCCHHHHHHHHHHHHHhhHHhhhh
Confidence 578888888887777777766 35799999999999 68776666666655 45555555555555443444443
No 343
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=21.79 E-value=1.2e+02 Score=23.80 Aligned_cols=72 Identities=7% Similarity=-0.045 Sum_probs=45.4
Q ss_pred HHHHhCCCcEEEEeeccCchhH-HHHHHHHHh-C-CCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHhh
Q 028963 124 ERLVGMGVEEVIVCGVMTNLCC-ETTARDAFV-R-GFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAGL 198 (201)
Q Consensus 124 ~~L~~~gi~~lvi~G~~T~~CV-~~Ta~~a~~-~-G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~l 198 (201)
+.|.+.|.++|+...++....- .++|..|.+ . +.+|+|+--.+.+......-.....|...|. +.+|+++.+
T Consensus 77 ~~l~~~g~d~ii~i~iSs~LSGTy~sA~~a~~~~~~~~I~ViDS~~~s~g~g~~v~~A~~l~~~G~---s~eeI~~~l 151 (285)
T 3lup_A 77 CQLEKEGYTHVLGLFIAAGISGFWQNIQFLIEEHPNLTIAFPDTKITSAPQGNLVRNALMCSREGM---DFDVIVNKI 151 (285)
T ss_dssp HHHHHTTCCEEEECCSCGGGCTHHHHHTTHHHHCTTSEEECCCCCCCHHHHHHHHHHHHHHHTTTC---CHHHHHHHH
T ss_pred HHHHHcCCCeEEEEeCCCchhHHHHHHHHHHHhCCCCCEEEEcCCchHHHHHHHHHHHHHHHHcCC---CHHHHHHHH
Confidence 3445579999999888765432 345554443 3 5789988888877765555555555555553 566665544
No 344
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=21.76 E-value=1.2e+02 Score=23.47 Aligned_cols=21 Identities=14% Similarity=0.166 Sum_probs=10.1
Q ss_pred CCchHHHHHhCCCcEEEEeecc
Q 028963 119 NTRLQERLVGMGVEEVIVCGVM 140 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~~ 140 (201)
+..+...|.+.|.+ |++++-.
T Consensus 45 G~~ia~~la~~G~~-V~~~~r~ 65 (296)
T 3k31_A 45 AWGIAKAVCAQGAE-VALTYLS 65 (296)
T ss_dssp HHHHHHHHHHTTCE-EEEEESS
T ss_pred HHHHHHHHHHCCCE-EEEEeCC
Confidence 34455555555543 4444443
No 345
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=21.73 E-value=2.4e+02 Score=20.65 Aligned_cols=30 Identities=17% Similarity=0.164 Sum_probs=15.6
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|..... =.+.++...++|++|+++
T Consensus 8 k~vlITGas~gI-G~~~a~~l~~~G~~v~~~ 37 (255)
T 3icc_A 8 KVALVTGASRGI-GRAIAKRLANDGALVAIH 37 (255)
T ss_dssp CEEEETTCSSHH-HHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCChH-HHHHHHHHHHCCCeEEEE
Confidence 455666654332 234555555666665553
No 346
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=21.71 E-value=3.2e+02 Score=22.06 Aligned_cols=93 Identities=13% Similarity=0.064 Sum_probs=55.2
Q ss_pred cccccccCCCCCCCEEEECCCCCCCCCC----chHHHHHhC--C--C--cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 93 ELLPEIKGLVAGADEVIEKNTYSAFGNT----RLQERLVGM--G--V--EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 93 ~~~~~l~~~~~~~~~vv~K~~~saf~~t----~L~~~L~~~--g--i--~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
..+.+++. ...-+||.-.. +.++.| +|--+.+.. | . .+|.++|-. +.-+.+-+..+...|.++.++
T Consensus 130 ~~~~~lA~--~~~vPVINag~-~~~HPtQaLaDl~Ti~e~~~~G~~l~glkva~vGD~-~rva~Sl~~~~~~~G~~v~~~ 205 (339)
T 4a8t_A 130 HSIVDLAN--CATIPVINGMS-DYNHPTQELGDLCTMVEHLPEGKKLEDCKVVFVGDA-TQVCFSLGLITTKMGMNFVHF 205 (339)
T ss_dssp HHHHHHHH--HCSSCEEECCC-SSCCHHHHHHHHHHHHHTCCTTCCGGGCEEEEESSC-CHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHH--hCCCCEEECCC-CCcCcHHHHHHHHHHHHHhhcCCCCCCCEEEEECCC-chhHHHHHHHHHHcCCEEEEE
Confidence 33444444 34455666543 334333 233334444 4 2 488899987 666777788888899999998
Q ss_pred cCCCCCCCHHHHHHHHHHHhhcceEEe
Q 028963 163 TDATATSDLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 163 ~Da~~~~~~~~h~~al~~l~~~~~~v~ 189 (201)
.-..-..+++..+.+-+.....|+.+.
T Consensus 206 ~P~~~~~~~~~~~~~~~~a~~~g~~v~ 232 (339)
T 4a8t_A 206 GPEGFQLNEEHQAKLAKNCEVSGGSFL 232 (339)
T ss_dssp CCTTSSCCHHHHHHHHHHHHHHCCEEE
T ss_pred CCcccCCCHHHHHHHHHHHHHcCCEEE
Confidence 876655666655555444444454443
No 347
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=21.70 E-value=1.8e+02 Score=21.69 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=34.5
Q ss_pred chHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHH
Q 028963 121 RLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLEL 173 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~ 173 (201)
++...++..+.+.++|+|.+.-..+...+.......+.-.|+.+.........
T Consensus 123 dl~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~ 175 (314)
T 3kxp_A 123 DIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEA 175 (314)
T ss_dssp HHHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHH
T ss_pred HHHHHHHHhCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcch
Confidence 46667777788999999999877665444333222366666666665555443
No 348
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=21.70 E-value=2e+02 Score=21.52 Aligned_cols=35 Identities=17% Similarity=0.182 Sum_probs=26.0
Q ss_pred CCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 129 MGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 129 ~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
..-+.++|+|...- -=.+.++.+.++|++|+++..
T Consensus 26 ~~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r 60 (260)
T 3un1_A 26 NQQKVVVITGASQG-IGAGLVRAYRDRNYRVVATSR 60 (260)
T ss_dssp TTCCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEES
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeC
Confidence 34578999997654 345788888899999988753
No 349
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=21.69 E-value=99 Score=24.69 Aligned_cols=31 Identities=29% Similarity=0.261 Sum_probs=23.6
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecCC
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
.|+|+|-= ..=+++|..+.++|++|+|++-.
T Consensus 6 DVvIIGaG--~~Gl~~A~~La~~G~~V~vlE~~ 36 (397)
T 2oln_A 6 DVVVVGGG--PVGLATAWQVAERGHRVLVLERH 36 (397)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEECCC--HHHHHHHHHHHHCCCeEEEEeCC
Confidence 56676643 45567899999999999999753
No 350
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=21.64 E-value=2.1e+02 Score=22.39 Aligned_cols=54 Identities=17% Similarity=0.169 Sum_probs=44.3
Q ss_pred CCCCCCCCCCchHHHHHhCCCcEEEEee-------ccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 111 KNTYSAFGNTRLQERLVGMGVEEVIVCG-------VMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 111 K~~~saf~~t~L~~~L~~~gi~~lvi~G-------~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
....++|++.--...|++.|++.++|-= -.||-.|..-+..|.+.|..+++...
T Consensus 93 ~~~~GAfTGEISa~MLkd~G~~~VIiGHSERR~~fgEtde~V~~K~~~Al~~GL~pIlCVG 153 (272)
T 4g1k_A 93 AHEQGAYTGEVAAGMVAEFGAAYAIVGHSERRAYHGESNETVAAKARRALAAGLTPIVCVG 153 (272)
T ss_dssp SSSSBSCTTCCCHHHHHTTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCCcCcCCHHHHHHcCCCEEEECchhcccccCCCHHHHHHHHHHHHHCCCeEEEEeC
Confidence 3457899988888999999999887742 36888899999999999999998543
No 351
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=21.61 E-value=61 Score=22.55 Aligned_cols=40 Identities=0% Similarity=0.047 Sum_probs=32.9
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHH-CCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRR-ASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~-~g~~vi~~~~ 65 (201)
.++|++...+|+......+.+.++.+..+. .++.||.+..
T Consensus 50 ~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~ 90 (165)
T 3s9f_A 50 TVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASW 90 (165)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEEC
T ss_pred EEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEec
Confidence 578888899998888889999999988875 5777887764
No 352
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=21.55 E-value=2.9e+02 Score=21.51 Aligned_cols=65 Identities=11% Similarity=0.062 Sum_probs=40.6
Q ss_pred CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEE
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYL 188 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v 188 (201)
+++++.|.+.+++-|+|+--. .--..-++.|+++|.+|++=. -.+.+.+..+..++..+..+..+
T Consensus 56 ~~~~~ll~~~~~D~V~i~tp~--~~h~~~~~~al~aGkhVl~EK--P~a~~~~e~~~l~~~a~~~g~~~ 120 (336)
T 2p2s_A 56 ASAEQLITDASIDLIACAVIP--CDRAELALRTLDAGKDFFTAK--PPLTTLEQLDAVQRRVAETGRKF 120 (336)
T ss_dssp SCHHHHHTCTTCCEEEECSCG--GGHHHHHHHHHHTTCEEEECS--SCCSCHHHHHHHHHHHHHHCCCE
T ss_pred CCHHHHhhCCCCCEEEEeCCh--hhHHHHHHHHHHCCCcEEEeC--CCCCCHHHHHHHHHHHHHcCCEE
Confidence 578888888889988887543 334566778899998877632 23334444444444444444433
No 353
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=21.55 E-value=2.6e+02 Score=22.37 Aligned_cols=98 Identities=8% Similarity=-0.088 Sum_probs=54.3
Q ss_pred cccccccCCCCCCCEEEECCCCCCCCCC----chHHHHHhCC---CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCC
Q 028963 93 ELLPEIKGLVAGADEVIEKNTYSAFGNT----RLQERLVGMG---VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDA 165 (201)
Q Consensus 93 ~~~~~l~~~~~~~~~vv~K~~~saf~~t----~L~~~L~~~g---i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da 165 (201)
..+.+++. ...-+||+-.. +-++.| +|--+.+..| --+|.++|-.. .-+.+-+..+...|.+|.++.-.
T Consensus 113 ~~~~~lA~--~~~vPVINa~~-~~~HPtQaLaDl~Ti~e~~g~l~gl~va~vGD~~-~va~Sl~~~~~~~G~~v~~~~P~ 188 (321)
T 1oth_A 113 SDLDTLAK--EASIPIINGLS-DLYHPIQILADYLTLQEHYSSLKGLTLSWIGDGN-NILHSIMMSAAKFGMHLQAATPK 188 (321)
T ss_dssp HHHHHHHH--HCSSCEEESCC-SSCCHHHHHHHHHHHHHHHSCCTTCEEEEESCSS-HHHHHHHTTTGGGTCEEEEECCT
T ss_pred hHHHHHHH--hCCCCEEcCCC-CCCCcHHHHHHHHHHHHHhCCcCCcEEEEECCch-hhHHHHHHHHHHcCCeEEEECCc
Confidence 44455555 34556777432 333332 2322333333 24799999864 34455555666789999999887
Q ss_pred CCCCCHHHHHHHHHHHhhcceEEeeHHHH
Q 028963 166 TATSDLELHEATLKNLAYGFAYLFDCERL 194 (201)
Q Consensus 166 ~~~~~~~~h~~al~~l~~~~~~v~~~~e~ 194 (201)
.-..+++..+.+-+..+..|+.+.-+.++
T Consensus 189 ~~~~~~~~~~~~~~~a~~~G~~~~~~~d~ 217 (321)
T 1oth_A 189 GYEPDASVTKLAEQYAKENGTKLLLTNDP 217 (321)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCCEEEESCH
T ss_pred cccCCHHHHHHHHHHHHHcCCeEEEEECH
Confidence 66666665555444444455444433333
No 354
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=21.47 E-value=1.2e+02 Score=24.81 Aligned_cols=57 Identities=11% Similarity=-0.012 Sum_probs=40.5
Q ss_pred HHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC-CCC-CHHHHHHHHHHHhhcceEEe
Q 028963 124 ERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT-ATS-DLELHEATLKNLAYGFAYLF 189 (201)
Q Consensus 124 ~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~-~~~-~~~~h~~al~~l~~~~~~v~ 189 (201)
.+|++.|++.|.|.-+.... ...||.+.-..+.- ..+ +.+..+..++.+.++|..|+
T Consensus 28 dyl~~lGv~~i~l~Pi~~~~---------~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~Vi 86 (405)
T 1ht6_A 28 DDIAAAGVTHVWLPPPSHSV---------SNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAI 86 (405)
T ss_dssp HHHHHTTCCEEEECCCSCBS---------STTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCCCEEEeCCCccCC---------CCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEE
Confidence 69999999999999988764 24788875443333 222 35667777777777777664
No 355
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.46 E-value=3.3e+02 Score=22.18 Aligned_cols=59 Identities=12% Similarity=-0.066 Sum_probs=40.8
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC---CCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT---ATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~---~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|--.-.| ..|..+.++|.+|++++-.- ...+++..+...+.++..+.++...
T Consensus 170 ~~~vvViGgG~~g~--e~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 231 (455)
T 1ebd_A 170 PKSLVVIGGGYIGI--ELGTAYANFGTKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTN 231 (455)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHHTTCEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEES
T ss_pred CCeEEEECCCHHHH--HHHHHHHHcCCcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeC
Confidence 47899888554433 34556678899999987432 3356777777778888777776543
No 356
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=21.37 E-value=1.6e+02 Score=23.76 Aligned_cols=41 Identities=17% Similarity=0.103 Sum_probs=31.8
Q ss_pred chHHHHHhCCCcEEEEe---------------ecc---CchhHHHHHHHHHhCCCeEEE
Q 028963 121 RLQERLVGMGVEEVIVC---------------GVM---TNLCCETTARDAFVRGFRVFF 161 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~---------------G~~---T~~CV~~Ta~~a~~~G~~v~v 161 (201)
...+.|++.|++.|-|. |.. ++.-|...++.|.++|++|++
T Consensus 57 ~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l 115 (343)
T 3civ_A 57 ASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCL 115 (343)
T ss_dssp HHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 34467888999998775 222 566788999999999999976
No 357
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=21.36 E-value=90 Score=23.14 Aligned_cols=26 Identities=23% Similarity=0.247 Sum_probs=13.8
Q ss_pred CCCCCCCCchHHHHHhCCCcEEEEeec
Q 028963 113 TYSAFGNTRLQERLVGMGVEEVIVCGV 139 (201)
Q Consensus 113 ~~saf~~t~L~~~L~~~gi~~lvi~G~ 139 (201)
+-+.+-+..+...|.+.|. +|++++-
T Consensus 21 Gas~gIG~~~a~~l~~~G~-~V~~~~r 46 (249)
T 3f9i_A 21 GASSGIGSAIARLLHKLGS-KVIISGS 46 (249)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEES
T ss_pred CCCChHHHHHHHHHHHCCC-EEEEEcC
Confidence 3344445566666666664 3555544
No 358
>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10
Probab=21.32 E-value=85 Score=23.69 Aligned_cols=38 Identities=13% Similarity=0.181 Sum_probs=30.2
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
||+.|+=.-+++....+.+...+.++. ++.|++++.+.
T Consensus 4 li~~DlDGTLl~~~~~i~~~~~~al~~-~~~Gi~v~iaT 41 (268)
T 1nf2_A 4 VFVFDLDGTLLNDNLEISEKDRRNIEK-LSRKCYVVFAS 41 (268)
T ss_dssp EEEEECCCCCSCTTSCCCHHHHHHHHH-HTTTSEEEEEC
T ss_pred EEEEeCCCcCCCCCCccCHHHHHHHHH-HhCCCEEEEEC
Confidence 789999888887655566677778888 88999888775
No 359
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=21.15 E-value=1.3e+02 Score=21.91 Aligned_cols=27 Identities=15% Similarity=-0.063 Sum_probs=15.8
Q ss_pred CCCCCCCCchHHHHHhCCCcEEEEeecc
Q 028963 113 TYSAFGNTRLQERLVGMGVEEVIVCGVM 140 (201)
Q Consensus 113 ~~saf~~t~L~~~L~~~gi~~lvi~G~~ 140 (201)
+.+.|-+..+...|.++|. +|++++-.
T Consensus 28 GatG~iG~~l~~~L~~~G~-~V~~~~R~ 54 (236)
T 3e8x_A 28 GANGKVARYLLSELKNKGH-EPVAMVRN 54 (236)
T ss_dssp TTTSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCChHHHHHHHHHHhCCC-eEEEEECC
Confidence 4555556667777776665 45544443
No 360
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=21.14 E-value=1.6e+02 Score=24.45 Aligned_cols=43 Identities=19% Similarity=0.153 Sum_probs=34.2
Q ss_pred CchHHHHHhCCCcEEEE---------------eeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 120 TRLQERLVGMGVEEVIV---------------CGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi---------------~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
.++.++|++.|+..|-| .|...---++..++.|.++|.+|++-
T Consensus 51 ~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlld 108 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLAD 108 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred chHHHHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 57889999999999987 13334446778888999999999985
No 361
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=21.08 E-value=1.3e+02 Score=22.35 Aligned_cols=29 Identities=14% Similarity=0.090 Sum_probs=12.9
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+++|+|... .-=.+.++.+.++|++|+++
T Consensus 9 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 37 (249)
T 2ew8_A 9 LAVITGGAN-GIGRAIAERFAVEGADIAIA 37 (249)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 445555332 22234444455555554443
No 362
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=21.04 E-value=2.6e+02 Score=20.74 Aligned_cols=30 Identities=13% Similarity=0.022 Sum_probs=15.9
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... .-=.+.++.+.++|++|+++
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 37 (260)
T 2z1n_A 8 KLAVVTAGSS-GLGFASALELARNGARLLLF 37 (260)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 4556666443 23345555555666665554
No 363
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=21.01 E-value=1.2e+02 Score=24.41 Aligned_cols=30 Identities=13% Similarity=0.072 Sum_probs=23.1
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
+|+|+|-= ..=+++|..+.++|++|+|++-
T Consensus 2 dVvVIGaG--iaGLsaA~~La~~G~~V~vlE~ 31 (421)
T 3nrn_A 2 RAVVVGAG--LGGLLAGAFLARNGHEIIVLEK 31 (421)
T ss_dssp EEEEESCS--HHHHHHHHHHHHTTCEEEEECS
T ss_pred cEEEECCC--HHHHHHHHHHHHCCCeEEEEeC
Confidence 46666643 4456889999999999999985
No 364
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=21.00 E-value=63 Score=26.09 Aligned_cols=42 Identities=14% Similarity=0.086 Sum_probs=32.5
Q ss_pred hHHHHH-hCCCcEEEEeeccCchhHHHHHHHHHh--C-CCeEEEec
Q 028963 122 LQERLV-GMGVEEVIVCGVMTNLCCETTARDAFV--R-GFRVFFST 163 (201)
Q Consensus 122 L~~~L~-~~gi~~lvi~G~~T~~CV~~Ta~~a~~--~-G~~v~vv~ 163 (201)
+.+.|. +.+.++|+++|.-++..+...+...+. . |..+.+..
T Consensus 30 ~~~~i~~~~~a~~I~i~G~GtS~~aa~~~~~~l~~~~~g~~~~~~~ 75 (347)
T 3fkj_A 30 IISDILGKQNIERVWFVGCGGSLTGFWPGKYFLDCEASKLAVGYIT 75 (347)
T ss_dssp HHHHHHTTSCCCEEEEEESTHHHHTTHHHHHHHHHHCSSCEEEEEE
T ss_pred HHHHHHhhCCCCEEEEEEehHHHHHHHHHHHHHHHHhCCCeEEEeC
Confidence 344555 568999999999999988888887776 3 88888764
No 365
>3qy1_A Carbonic anhydrase; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 1.54A {Salmonella enterica subsp} SCOP: c.53.2.1 PDB: 1i6p_A 1i6o_A 1t75_A 2esf_A
Probab=20.86 E-value=2e+02 Score=21.75 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=34.8
Q ss_pred CCCCEEEECCCCCCCCCCc------hHHHHHhCCCcEEEEeeccCchhHHHHH
Q 028963 103 AGADEVIEKNTYSAFGNTR------LQERLVGMGVEEVIVCGVMTNLCCETTA 149 (201)
Q Consensus 103 ~~~~~vv~K~~~saf~~t~------L~~~L~~~gi~~lvi~G~~T~~CV~~Ta 149 (201)
.++|..+.++--+....++ |+-.....|+++|+|+|=.-...|.++.
T Consensus 59 ~~Gd~fv~Rnagn~v~~~d~~~~~sleyAV~~L~v~~IvV~GHt~CGav~Aa~ 111 (223)
T 3qy1_A 59 EPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHSGCGGIKAAV 111 (223)
T ss_dssp CGGGEEEEEETTCCCCTTCHHHHHHHHHHHHTTCCSEEEEEEETTCHHHHHHH
T ss_pred CCCCEEEEeecccccCCCcchhHHHHHHHHHhcCCCEEEEECCCCCHHHHHHh
Confidence 6788888888766664432 4444567999999999988887777654
No 366
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=20.83 E-value=3.3e+02 Score=21.85 Aligned_cols=66 Identities=12% Similarity=0.035 Sum_probs=41.9
Q ss_pred cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCC--CCHHHHHHHHHHHhh--cceEEeeHHHHHHh
Q 028963 132 EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATAT--SDLELHEATLKNLAY--GFAYLFDCERLEAG 197 (201)
Q Consensus 132 ~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~--~~~~~h~~al~~l~~--~~~~v~~~~e~~~~ 197 (201)
.+|.++|-..+..+.+-+..+...|.++.++.--.-. .+++.-+.+.+.... .|+.+.-+.++-++
T Consensus 162 l~va~vGD~~~~va~Sl~~~~~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~~g~~v~~~~d~~ea 231 (328)
T 3grf_A 162 IKFAYCGDSMNNVTYDLMRGCALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHGTGGSIKIFHDCKKG 231 (328)
T ss_dssp CCEEEESCCSSHHHHHHHHHHHHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHTCCCEEEEESSHHHH
T ss_pred cEEEEeCCCCcchHHHHHHHHHHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhccCCCeEEEEcCHHHH
Confidence 4788889876666677777777889999998766555 555555554444444 45555444444333
No 367
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=20.81 E-value=81 Score=22.70 Aligned_cols=40 Identities=13% Similarity=0.041 Sum_probs=33.7
Q ss_pred EEEEecc-CccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQ-NHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q-~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++. ..|++.....++.++++.+.++..++.+|.+..
T Consensus 38 ~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~ 78 (202)
T 1uul_A 38 WLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSM 78 (202)
T ss_dssp EEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEES
T ss_pred eEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 5778888 889988788889999999999888888888854
No 368
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=20.79 E-value=1.1e+02 Score=21.71 Aligned_cols=59 Identities=14% Similarity=0.075 Sum_probs=40.2
Q ss_pred CchHHHHHhCCCcEE--EEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHH
Q 028963 120 TRLQERLVGMGVEEV--IVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKN 180 (201)
Q Consensus 120 t~L~~~L~~~gi~~l--vi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~ 180 (201)
.-|..+|++.|.+-+ .+++-. .-+..+...+.+.++++++.+=.++-...+....+++.
T Consensus 30 ~~l~~~l~~~G~~v~~~~iv~Dd--~~i~~al~~a~~~~~DlVittGG~s~g~~D~t~eal~~ 90 (164)
T 3pzy_A 30 PIITEWLAQQGFSSAQPEVVADG--SPVGEALRKAIDDDVDVILTSGGTGIAPTDSTPDQTVA 90 (164)
T ss_dssp HHHHHHHHHTTCEECCCEEECSS--HHHHHHHHHHHHTTCSEEEEESCCSSSTTCCHHHHHHT
T ss_pred HHHHHHHHHCCCEEEEEEEeCCH--HHHHHHHHHHHhCCCCEEEECCCCCCCCCccHHHHHHH
Confidence 568899999997533 333333 45666677777778999999988877665554444443
No 369
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=20.79 E-value=1.1e+02 Score=26.45 Aligned_cols=28 Identities=11% Similarity=0.172 Sum_probs=25.0
Q ss_pred chhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 39 AKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 39 ~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
+...-+++.++++.|.+.++|+|+..+.
T Consensus 112 g~~~~~Ki~ra~e~A~~~~lP~I~l~~S 139 (523)
T 1on3_A 112 GETQSTKVVETMEQALLTGTPFLFFYDS 139 (523)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5667899999999999999999999864
No 370
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis, accase, ligase, transferase; 2.2A {Mycobacterium tuberculosis} PDB: 2a7s_A
Probab=20.78 E-value=1.3e+02 Score=26.26 Aligned_cols=28 Identities=7% Similarity=0.074 Sum_probs=25.2
Q ss_pred chhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 39 AKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 39 ~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
+....+++.++.+.|.+.++|+|+..+.
T Consensus 125 g~~~~~Ki~ra~e~A~~~~lP~I~l~dS 152 (548)
T 2bzr_A 125 GEVYGEKIVKVQELAIKTGRPLIGINDG 152 (548)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred ChhHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 5678999999999999999999999874
No 371
>2f9i_A Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; zinc ribbon, crotonase superfamily, spiral domain; 1.98A {Staphylococcus aureus}
Probab=20.75 E-value=1.7e+02 Score=23.47 Aligned_cols=29 Identities=10% Similarity=0.111 Sum_probs=25.2
Q ss_pred chhHHHHHHHHHHHHHHCCCcEEEEeccc
Q 028963 39 AKPILDNTLATVQLCRRASIPVFFTRHCH 67 (201)
Q Consensus 39 ~~~~i~~i~~l~~~ar~~g~~vi~~~~~~ 67 (201)
......++.++++.|.+.++|+|+..+..
T Consensus 142 ~~~~~~Ka~r~~~~A~~~~~PlI~lvdt~ 170 (327)
T 2f9i_A 142 HPEGYRKALRLMKQAEKFNRPIFTFIDTK 170 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred CHHHHHHHHHHHHHHhhcCCCEEEEEeCC
Confidence 45578999999999999999999998864
No 372
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=20.74 E-value=66 Score=21.80 Aligned_cols=40 Identities=0% Similarity=0.027 Sum_probs=32.2
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|+......+.+.++.+.....++.++.+..
T Consensus 36 ~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~ 75 (165)
T 3or5_A 36 AYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAV 75 (165)
T ss_dssp EEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEEC
T ss_pred EEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEEC
Confidence 5677888888888888899999999998877777777653
No 373
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=20.73 E-value=94 Score=21.90 Aligned_cols=41 Identities=7% Similarity=-0.007 Sum_probs=33.5
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecc
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHC 66 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~ 66 (201)
.++|++...+|+......+.++++.+.....++.++.+...
T Consensus 48 ~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d 88 (196)
T 2ywi_A 48 ATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSN 88 (196)
T ss_dssp EEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECS
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECC
Confidence 47778888888877788899999999988888888888643
No 374
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=20.72 E-value=2.2e+02 Score=22.14 Aligned_cols=54 Identities=17% Similarity=0.137 Sum_probs=43.1
Q ss_pred CCCCCCCCCCchHHHHHhCCCcEEEEee-------ccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 111 KNTYSAFGNTRLQERLVGMGVEEVIVCG-------VMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 111 K~~~saf~~t~L~~~L~~~gi~~lvi~G-------~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
....++|++.--...|++.|++.++|-= -.||--|..-+..|.+.|..+++...
T Consensus 67 ~~~~GA~TGEiS~~mL~d~G~~~ViiGHSERR~~f~Etd~~v~~Kv~~Al~~GL~pIvCvG 127 (259)
T 2i9e_A 67 KVPKGAFTGEISPAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVIACIG 127 (259)
T ss_dssp SSSSBSCTTCCCHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCCCCccCccCHHHHHHcCCCEEEECchhhhhhcCCCHHHHHHHHHHHHHCCCeEEEEcC
Confidence 3457889888888999999998877642 26888899999999999999988543
No 375
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=20.71 E-value=72 Score=20.74 Aligned_cols=22 Identities=18% Similarity=0.166 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHCCCcEEEEe
Q 028963 43 LDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 43 i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
-.-..++++.|+++|+||+--.
T Consensus 26 ~~~A~~I~e~A~e~gVPi~e~~ 47 (93)
T 2vt1_B 26 NQCALAVRKYANEVGIPTVRDV 47 (93)
T ss_dssp HHHHHHHHHHHHHTTCCEEECH
T ss_pred cHHHHHHHHHHHHcCCCEEECH
Confidence 3445567778999999998653
No 376
>2g8y_A Malate/L-lactate dehydrogenases; NAD, E.coli, structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: NAD 1PE; 2.15A {Escherichia coli}
Probab=20.70 E-value=74 Score=26.36 Aligned_cols=45 Identities=9% Similarity=0.179 Sum_probs=34.6
Q ss_pred CCeEEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEecccC
Q 028963 22 KSSVLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRHCHK 68 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~~~~ 68 (201)
...++++||-+++|-. -.....+..+++.||++|+-++.++..+.
T Consensus 98 ~~~a~~~vDg~~g~G~--~~~~~am~~aiekAk~~Gig~v~vrns~H 142 (385)
T 2g8y_A 98 EAGAAVTLDGDRAFGQ--VAAHEAMALGIEKAHQHGIAAVALHNSHH 142 (385)
T ss_dssp EETTEEEEECTTBCHH--HHHHHHHHHHHHHHHHHSEEEEEEEEEEC
T ss_pred cCCcEEEEECCCCcHH--HHHHHHHHHHHHHHHHcCEEEEEEeCCCC
Confidence 3568899999998842 22455677889999999999998887655
No 377
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=20.66 E-value=1.1e+02 Score=20.27 Aligned_cols=40 Identities=8% Similarity=0.039 Sum_probs=31.8
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++-..+|+......+.+.++.+.....++.++.+..
T Consensus 30 ~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~ 69 (153)
T 2l5o_A 30 VTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQ 69 (153)
T ss_dssp EEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEEC
T ss_pred EEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEec
Confidence 4667777888988888889999998888877887777753
No 378
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=20.65 E-value=3.5e+02 Score=22.11 Aligned_cols=59 Identities=10% Similarity=-0.016 Sum_probs=40.7
Q ss_pred CcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCC---CCCCHHHHHHHHHHHhhcceEEeeH
Q 028963 131 VEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDAT---ATSDLELHEATLKNLAYGFAYLFDC 191 (201)
Q Consensus 131 i~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~---~~~~~~~h~~al~~l~~~~~~v~~~ 191 (201)
.++++|+|----.| ..|..+..+|.+|++++-.- ...+++..+...+.++..+.++...
T Consensus 171 ~~~vvViGgG~~g~--E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~ 232 (464)
T 2a8x_A 171 PKSIIIAGAGAIGM--EFGYVLKNYGVDVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTA 232 (464)
T ss_dssp CSEEEEECCSHHHH--HHHHHHHHTTCEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECS
T ss_pred CCeEEEECCcHHHH--HHHHHHHHcCCeEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeC
Confidence 47899988654433 34455667899999997542 3357777777788888777776553
No 379
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=20.64 E-value=1.6e+02 Score=20.08 Aligned_cols=21 Identities=14% Similarity=0.140 Sum_probs=12.0
Q ss_pred CCchHHHHHhCCCcEEEEeecc
Q 028963 119 NTRLQERLVGMGVEEVIVCGVM 140 (201)
Q Consensus 119 ~t~L~~~L~~~gi~~lvi~G~~ 140 (201)
+..+...|++.|. +|+++.-.
T Consensus 31 G~~la~~L~~~g~-~V~vid~~ 51 (155)
T 2g1u_A 31 GSLIANLASSSGH-SVVVVDKN 51 (155)
T ss_dssp HHHHHHHHHHTTC-EEEEEESC
T ss_pred HHHHHHHHHhCCC-eEEEEECC
Confidence 4556667777765 45544443
No 380
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=20.63 E-value=2.5e+02 Score=22.36 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=36.7
Q ss_pred hCCCcEEEEeeccCchhHHHHHHH--HHhCCCeEEEecCC-CCCCCHHHHHHHHHHHh
Q 028963 128 GMGVEEVIVCGVMTNLCCETTARD--AFVRGFRVFFSTDA-TATSDLELHEATLKNLA 182 (201)
Q Consensus 128 ~~gi~~lvi~G~~T~~CV~~Ta~~--a~~~G~~v~vv~Da-~~~~~~~~h~~al~~l~ 182 (201)
..|+++|+++|-....|++..... +..+|+++++..-- |.+-.-..-.+.+..++
T Consensus 247 ~~g~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~ 304 (334)
T 3eno_A 247 VSGKDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYK 304 (334)
T ss_dssp HHTCSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHH
T ss_pred HcCCCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHH
Confidence 368999999998888888865543 34569999887652 44444444455555554
No 381
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=20.62 E-value=1.3e+02 Score=23.05 Aligned_cols=31 Identities=13% Similarity=0.221 Sum_probs=22.3
Q ss_pred cEEEEeecc-CchhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVM-TNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~-T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+.++|+|.. +..==.++|+...++|++|+++
T Consensus 9 k~~lVTGas~~~GIG~aia~~la~~G~~V~~~ 40 (297)
T 1d7o_A 9 KRAFIAGIADDNGYGWAVAKSLAAAGAEILVG 40 (297)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEe
Confidence 578888876 2444567777888888888776
No 382
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=20.61 E-value=1.3e+02 Score=24.05 Aligned_cols=43 Identities=14% Similarity=0.190 Sum_probs=34.1
Q ss_pred CchHHHHHhCCCcEEEEe-------eccCchhHHHHHHHHHhCCCeEEEe
Q 028963 120 TRLQERLVGMGVEEVIVC-------GVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~-------G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
.+..++|++.|++.+-+- |...---++..++.|.++|++|++-
T Consensus 30 ~~~~~ilk~~G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld 79 (334)
T 1fob_A 30 QALETILADAGINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSLYLD 79 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEEEEE
T ss_pred chHHHHHHHcCCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEEEEE
Confidence 467899999999999882 5455456667788899999999886
No 383
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=20.60 E-value=1.2e+02 Score=23.89 Aligned_cols=30 Identities=20% Similarity=0.195 Sum_probs=23.1
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEecC
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFSTD 164 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~D 164 (201)
.|+|+|-= ..=+++|..+.++|++|+|++.
T Consensus 8 dVvVIG~G--i~Gls~A~~La~~G~~V~vle~ 37 (363)
T 1c0p_A 8 RVVVLGSG--VIGLSSALILARKGYSVHILAR 37 (363)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEECCC--HHHHHHHHHHHhCCCEEEEEec
Confidence 56776643 4456788999999999999974
No 384
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=20.60 E-value=1.8e+02 Score=21.66 Aligned_cols=15 Identities=13% Similarity=0.242 Sum_probs=6.8
Q ss_pred HHHHHHHhCCCeEEE
Q 028963 147 TTARDAFVRGFRVFF 161 (201)
Q Consensus 147 ~Ta~~a~~~G~~v~v 161 (201)
+.++.+.++|++|++
T Consensus 17 ~ia~~l~~~G~~V~~ 31 (258)
T 3a28_C 17 GISEKLAADGFDIAV 31 (258)
T ss_dssp HHHHHHHHHTCEEEE
T ss_pred HHHHHHHHCCCEEEE
Confidence 444444444444444
No 385
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=20.59 E-value=3.4e+02 Score=21.89 Aligned_cols=56 Identities=16% Similarity=0.036 Sum_probs=34.0
Q ss_pred HhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 127 VGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 127 ~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
.+.|.++||-++- .|.+. ++|..+..+|++++++-....+ ..-++.++..|++|+-
T Consensus 89 ~~~g~~~vv~aSs-GN~g~-alA~aa~~~G~~~~iv~p~~~~------~~k~~~~~~~GA~V~~ 144 (372)
T 1p5j_A 89 AKQGCAHFVCSSA-GNAGM-AAAYAARQLGVPATIVVPGTTP------ALTIERLKNEGATCKV 144 (372)
T ss_dssp HHTTCCEEEECCS-SHHHH-HHHHHHHHHTCCEEEEECTTCC------HHHHHHHHHTTCEEEE
T ss_pred HHcCCCEEEEeCC-CHHHH-HHHHHHHHcCCcEEEEECCCCC------HHHHHHHHhcCCEEEE
Confidence 3467666665543 45444 4566778899998877665432 2234455566777764
No 386
>3jzd_A Iron-containing alcohol dehydrogenase; YP_298327.1, putative alcohol dehedrogenase, structural GENO joint center for structural genomics; HET: MSE NAD PG4 P6G PGE; 2.10A {Ralstonia eutropha}
Probab=20.57 E-value=3.4e+02 Score=21.86 Aligned_cols=63 Identities=8% Similarity=0.087 Sum_probs=36.9
Q ss_pred CchHHHHHhCCCcEE-EEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhc
Q 028963 120 TRLQERLVGMGVEEV-IVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYG 184 (201)
Q Consensus 120 t~L~~~L~~~gi~~l-vi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~ 184 (201)
..|.+++++.|.+++ +|+|-.. .-....+.+.++. ..+.+..+.+...+.+.-+.+++.++..
T Consensus 25 ~~l~~~l~~~g~~r~liVtd~~~-~~~~~~v~~~L~~-~~~~~f~~v~~~p~~~~v~~~~~~~~~~ 88 (358)
T 3jzd_A 25 SQVAAEVERLGAKRALVLCTPNQ-QAEAERIADLLGP-LSAGVYAGAVMHVPIESARDATARAREA 88 (358)
T ss_dssp GGHHHHHHHTTCSCEEEECCGGG-HHHHHHHHHHHGG-GEEEEECCCCTTCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEeCCcH-HHHHHHHHHHhcc-CCEEEecCCcCCCCHHHHHHHHHHhhcc
Confidence 367788888886554 4555443 2344455555543 2455566666555666666677666644
No 387
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=20.56 E-value=30 Score=23.27 Aligned_cols=40 Identities=5% Similarity=0.004 Sum_probs=32.8
Q ss_pred EEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEec
Q 028963 26 LLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTRH 65 (201)
Q Consensus 26 LlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~~ 65 (201)
.++|++...+|++.....+.+.++.+..+..++.+|.+..
T Consensus 34 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~ 73 (143)
T 4fo5_A 34 YTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISM 73 (143)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEEC
T ss_pred EEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEc
Confidence 6788999999988888888999988887777887877754
No 388
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=20.56 E-value=1e+02 Score=21.75 Aligned_cols=25 Identities=8% Similarity=0.002 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHCCCcEEEEeccc
Q 028963 43 LDNTLATVQLCRRASIPVFFTRHCH 67 (201)
Q Consensus 43 i~~i~~l~~~ar~~g~~vi~~~~~~ 67 (201)
-+.+.++++.||+.|.+||.+....
T Consensus 123 t~~~~~~~~~ak~~g~~vi~iT~~~ 147 (188)
T 1tk9_A 123 SPNVLEALKKAKELNMLCLGLSGKG 147 (188)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4667788889999999999887653
No 389
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=20.56 E-value=1.4e+02 Score=23.43 Aligned_cols=62 Identities=11% Similarity=-0.024 Sum_probs=40.0
Q ss_pred CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcc
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGF 185 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~ 185 (201)
+++++.|....++-|+|+- .+.-=..-++.|+++|.+|.+=.=.+ .+.+..+..++..+..+
T Consensus 57 ~~~~~ll~~~~vD~V~I~t--p~~~H~~~~~~al~aGkhVl~EKPla--~~~~ea~~l~~~a~~~g 118 (337)
T 3ip3_A 57 NNWWEMLEKEKPDILVINT--VFSLNGKILLEALERKIHAFVEKPIA--TTFEDLEKIRSVYQKVR 118 (337)
T ss_dssp SSHHHHHHHHCCSEEEECS--SHHHHHHHHHHHHHTTCEEEECSSSC--SSHHHHHHHHHHHHHHT
T ss_pred CCHHHHhcCCCCCEEEEeC--CcchHHHHHHHHHHCCCcEEEeCCCC--CCHHHHHHHHHHHHHhC
Confidence 6899999988999999873 23334466889999999876433332 23344444444444433
No 390
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=20.42 E-value=2.5e+02 Score=20.86 Aligned_cols=67 Identities=10% Similarity=0.041 Sum_probs=35.3
Q ss_pred CchHHHHHhCCCcEEEEeeccCch------------hHHHHHHHHHhCCCe-EEEecCCCCCC-CHHHHHHHHHHHhhcc
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNL------------CCETTARDAFVRGFR-VFFSTDATATS-DLELHEATLKNLAYGF 185 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~------------CV~~Ta~~a~~~G~~-v~vv~Da~~~~-~~~~h~~al~~l~~~~ 185 (201)
....+.|.+.|+.-|++-....+. .....+..+.++|++ +.++....... ..+..+...+.+...+
T Consensus 82 ~~~~~~l~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~g 161 (292)
T 3k4h_A 82 DRIIQYLHEQNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHKQIAFIGGGSDLLVTRDRLAGMSDALKLAD 161 (292)
T ss_dssp CHHHHHHHHTTCCEEEESCCSSCTTTSCEEECCHHHHHHHHHHHHHHTTCCCEEEEESCTTBHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHCCCCEEEECCCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCceEEEEeCcccchhHHHHHHHHHHHHHHcC
Confidence 456677888899877664433221 234555667788886 44443322221 1233333444555544
Q ss_pred e
Q 028963 186 A 186 (201)
Q Consensus 186 ~ 186 (201)
.
T Consensus 162 ~ 162 (292)
T 3k4h_A 162 I 162 (292)
T ss_dssp C
T ss_pred C
Confidence 3
No 391
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=20.41 E-value=3e+02 Score=21.24 Aligned_cols=50 Identities=28% Similarity=0.126 Sum_probs=30.6
Q ss_pred EEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 134 VIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 134 lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
.|++.-+.|.+. +.|..+..+|++++++-....+ ..-+..++..|++|+-
T Consensus 64 ~vv~assGN~g~-a~A~~a~~~G~~~~i~~p~~~~------~~k~~~~~~~Ga~V~~ 113 (304)
T 1ve1_A 64 VIVEPTSGNTGI-GLAMIAASRGYRLILTMPAQMS------EERKRVLKAFGAELVL 113 (304)
T ss_dssp EEEESCCSHHHH-HHHHHHHHHTCEEEEEEETTCC------HHHHHHHHHTTCEEEE
T ss_pred EEEEeCCcHHHH-HHHHHHHHcCCcEEEEeCCCCC------HHHHHHHHHcCCEEEE
Confidence 555555555555 5677777899998876654322 2234455566777664
No 392
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=20.40 E-value=1.4e+02 Score=22.03 Aligned_cols=29 Identities=17% Similarity=0.061 Sum_probs=12.9
Q ss_pred EEEEeeccCchhHHHHHHHHHhCCCeEEEe
Q 028963 133 EVIVCGVMTNLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 133 ~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv 162 (201)
+++|+|... .-=.+.++.+.++|++|+++
T Consensus 13 ~vlITGasg-giG~~la~~l~~~G~~V~~~ 41 (254)
T 2wsb_A 13 CAAVTGAGS-GIGLEICRAFAASGARLILI 41 (254)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 445555332 22334444444555554443
No 393
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=20.40 E-value=3.2e+02 Score=21.60 Aligned_cols=62 Identities=13% Similarity=-0.048 Sum_probs=39.9
Q ss_pred CchHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcc
Q 028963 120 TRLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGF 185 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~ 185 (201)
+++++.|...+++-|+|+--. ..-..-++.|+++|.+|++=.=.+. +.+..+..++..+..+
T Consensus 55 ~~~~~ll~~~~vD~V~i~tp~--~~H~~~~~~al~aGkhVl~EKP~a~--~~~ea~~l~~~a~~~g 116 (362)
T 3fhl_A 55 RSFKELTEDPEIDLIVVNTPD--NTHYEYAGMALEAGKNVVVEKPFTS--TTKQGEELIALAKKKG 116 (362)
T ss_dssp SCSHHHHTCTTCCEEEECSCG--GGHHHHHHHHHHTTCEEEEESSCCS--SHHHHHHHHHHHHHHT
T ss_pred CCHHHHhcCCCCCEEEEeCCh--HHHHHHHHHHHHCCCeEEEecCCCC--CHHHHHHHHHHHHHcC
Confidence 578899988889998888443 3445668889999988876444333 3333444444444333
No 394
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=20.33 E-value=2.5e+02 Score=21.59 Aligned_cols=13 Identities=8% Similarity=0.003 Sum_probs=5.9
Q ss_pred CCchHHHHHhCCC
Q 028963 119 NTRLQERLVGMGV 131 (201)
Q Consensus 119 ~t~L~~~L~~~gi 131 (201)
+..+...|.+.|.
T Consensus 39 G~aia~~L~~~G~ 51 (297)
T 1xhl_A 39 GRSAAVIFAKEGA 51 (297)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCC
Confidence 3444444444444
No 395
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=20.28 E-value=2.4e+02 Score=20.10 Aligned_cols=48 Identities=8% Similarity=-0.038 Sum_probs=34.0
Q ss_pred chHHHHHhCCCcEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCC
Q 028963 121 RLQERLVGMGVEEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATAT 168 (201)
Q Consensus 121 ~L~~~L~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~ 168 (201)
++...++..+++.++|+|.+.-..+...+......-.+-.++.+....
T Consensus 80 ~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 127 (278)
T 3oos_A 80 DLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAAS 127 (278)
T ss_dssp HHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred HHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccc
Confidence 566778888999999999998877765544444334666666666554
No 396
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=20.27 E-value=94 Score=23.33 Aligned_cols=40 Identities=20% Similarity=0.327 Sum_probs=24.4
Q ss_pred EEEEEeccCccCCCchhHHHHHHHHHHHHHHCCCcEEEEe
Q 028963 25 VLLVIDMQNHFSSIAKPILDNTLATVQLCRRASIPVFFTR 64 (201)
Q Consensus 25 aLlviD~Q~~f~~~~~~~i~~i~~l~~~ar~~g~~vi~~~ 64 (201)
=||+.|+=.-+++....+.+...+.++.+++.|+.++.+.
T Consensus 6 kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaT 45 (279)
T 3mpo_A 6 KLIAIDIDGTLLNEKNELAQATIDAVQAAKAQGIKVVLCT 45 (279)
T ss_dssp CEEEECC-----------CHHHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEEcCcCCCCCCCCcCCHHHHHHHHHHHHCCCEEEEEc
Confidence 4889999888887766777888888888999999888775
No 397
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=20.19 E-value=2.9e+02 Score=20.89 Aligned_cols=15 Identities=33% Similarity=0.479 Sum_probs=6.7
Q ss_pred HHHHHHHhCCCeEEE
Q 028963 147 TTARDAFVRGFRVFF 161 (201)
Q Consensus 147 ~Ta~~a~~~G~~v~v 161 (201)
+.++.+.++|++|++
T Consensus 44 aia~~L~~~G~~V~~ 58 (276)
T 2b4q_A 44 MIAQGLLEAGARVFI 58 (276)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCEEEE
Confidence 344444444444443
No 398
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=20.13 E-value=1.9e+02 Score=22.65 Aligned_cols=68 Identities=15% Similarity=0.021 Sum_probs=41.8
Q ss_pred HHhCCCcEEEEeeccCchhH-HHHHHHHHhC------CCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEeeHHHHHHh
Q 028963 126 LVGMGVEEVIVCGVMTNLCC-ETTARDAFVR------GFRVFFSTDATATSDLELHEATLKNLAYGFAYLFDCERLEAG 197 (201)
Q Consensus 126 L~~~gi~~lvi~G~~T~~CV-~~Ta~~a~~~------G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~~~e~~~~ 197 (201)
|.+.| ++|+...++....- .++|..|.+. +.+|+|+--.+.+......-.....|...|. +.+|+++.
T Consensus 77 l~~~g-~~ii~i~iSs~LSGTy~sA~~aa~~~~ee~~~~~I~ViDS~~~s~g~g~~v~~A~~l~~~G~---s~eeI~~~ 151 (289)
T 1pzx_A 77 YAKEN-RPCLYIAFSSKLSGTYQTAMAVRSELLDEYPEFRLTIIDSKCASLGQGLAVMKAVELAKQNT---PYNLLCET 151 (289)
T ss_dssp HHHTT-CCEEEEECCTTTCSHHHHHHHHHHHHHHHSTTCCEEEEECCCCHHHHHHHHHHHHHHHHTTC---CHHHHHHH
T ss_pred HHhCC-CeEEEEECCCchhHHHHHHHHHHHhhHhhCCCCeEEEEcCchhhHHHHHHHHHHHHHHHcCC---CHHHHHHH
Confidence 33556 68888888776543 3556655544 6789999888887765544444444444553 44555443
No 399
>1rrm_A Lactaldehyde reductase; structural genomics, dehydrogenase, PSI, protein structure initiative; HET: APR; 1.60A {Escherichia coli} SCOP: e.22.1.2 PDB: 2bi4_A* 2bl4_A*
Probab=20.09 E-value=2.2e+02 Score=23.07 Aligned_cols=65 Identities=8% Similarity=0.102 Sum_probs=40.8
Q ss_pred CchHHHHHhCCCcEEEEeecc-C-chhHHHHHHHHH-hCCCeEEEecCCCCCCCHHHHHHHHHHHhhc
Q 028963 120 TRLQERLVGMGVEEVIVCGVM-T-NLCCETTARDAF-VRGFRVFFSTDATATSDLELHEATLKNLAYG 184 (201)
Q Consensus 120 t~L~~~L~~~gi~~lvi~G~~-T-~~CV~~Ta~~a~-~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~ 184 (201)
..|.+.+++.|.++++|+.-. . .......+.+.+ +.|+.+.+..+.....+.+.-+...+.++..
T Consensus 20 ~~l~~~l~~~g~~~~livtd~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~ 87 (386)
T 1rrm_A 20 GALTDEVKRRGYQKALIVTDKTLVQCGVVAKVTDKMDAAGLAWAIYDGVVPNPTITVVKEGLGVFQNS 87 (386)
T ss_dssp GGHHHHHHHHTCCEEEEECBHHHHHTTHHHHHHHHHHHTTCEEEEECBCCSSCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEECcchhhchHHHHHHHHHHHcCCeEEEECCccCCCCHHHHHHHHHHHHhc
Confidence 357777877776665555422 1 112445555555 4788888877766666777777777777643
No 400
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=20.06 E-value=1e+02 Score=23.12 Aligned_cols=31 Identities=23% Similarity=0.145 Sum_probs=15.3
Q ss_pred cEEEEeeccC-chhHHHHHHHHHhCCCeEEEe
Q 028963 132 EEVIVCGVMT-NLCCETTARDAFVRGFRVFFS 162 (201)
Q Consensus 132 ~~lvi~G~~T-~~CV~~Ta~~a~~~G~~v~vv 162 (201)
++++|+|... ..==.+.++.+.++|++|+++
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~ 52 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAIT 52 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEEC
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEE
Confidence 4555555542 222334555555555555544
No 401
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=20.04 E-value=3.1e+02 Score=21.28 Aligned_cols=57 Identities=19% Similarity=0.105 Sum_probs=32.5
Q ss_pred HHhCCC----cEEEEeeccCchhHHHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHHHHHhhcceEEee
Q 028963 126 LVGMGV----EEVIVCGVMTNLCCETTARDAFVRGFRVFFSTDATATSDLELHEATLKNLAYGFAYLFD 190 (201)
Q Consensus 126 L~~~gi----~~lvi~G~~T~~CV~~Ta~~a~~~G~~v~vv~Da~~~~~~~~h~~al~~l~~~~~~v~~ 190 (201)
+.+.|. ++|+-++ +.|.+. +.|..+..+|++++++-....+ + .-+..++..|++|+-
T Consensus 53 a~~~g~~~~~~~vv~~s-sGN~g~-a~A~~a~~~G~~~~iv~p~~~~--~----~k~~~~~~~GA~v~~ 113 (316)
T 1y7l_A 53 AEKDGTLTKGKEIVDAT-SGNTGI-ALAYVAAARGYKITLTMPETMS--L----ERKRLLCGLGVNLVL 113 (316)
T ss_dssp HHHTTSSCTTCEEEESC-CSHHHH-HHHHHHHHHTCCEEEEEETTSC--H----HHHHHHHHTTCEEEE
T ss_pred HHHcCCCCCCCEEEEeC-CcHHHH-HHHHHHHHcCCcEEEEECCCCC--H----HHHHHHHHcCCEEEE
Confidence 344555 4444443 555555 6677777889988776654322 2 234455556777654
No 402
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=20.02 E-value=89 Score=24.48 Aligned_cols=48 Identities=17% Similarity=0.082 Sum_probs=33.8
Q ss_pred CCeEEEEEeccCccCCC--------c---hhHHHHHHHHHHHHHHCCCcEEEEecccCC
Q 028963 22 KSSVLLVIDMQNHFSSI--------A---KPILDNTLATVQLCRRASIPVFFTRHCHKS 69 (201)
Q Consensus 22 ~~~aLlviD~Q~~f~~~--------~---~~~i~~i~~l~~~ar~~g~~vi~~~~~~~~ 69 (201)
.+..|||||--..+... . ..+..-+..|...+++.+++||++.+....
T Consensus 203 ~~~~lvVIDsl~~l~~~~~~~~~~~~~r~~~~~~~~~~L~~la~~~~~~vi~~nq~~~~ 261 (322)
T 2i1q_A 203 NNIKLVVIDSLTSTFRNEYTGRGKLAERQQKLGRHMATLNKLADLFNCVVLVTNQVSAK 261 (322)
T ss_dssp CEEEEEEEECSSHHHHHHCCCTTSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECEECC
T ss_pred cCccEEEEECcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECceeec
Confidence 45789999987765421 1 123445567778889999999999877654
Done!