BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028968
(201 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W463|RK191_ARATH 50S ribosomal protein L19-1, chloroplastic OS=Arabidopsis thaliana
GN=At4g17560 PE=2 SV=1
Length = 225
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 144/206 (69%), Gaps = 23/206 (11%)
Query: 1 MGSQVLPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPI---GWNLGFFV 57
M LPQALH IPR+ TQ SK LGFS+ LS P + +SVS + G GF +
Sbjct: 3 MSFHRLPQALHMIPRNPTQS--SKNLGFSSFLSCAPSMDSRISVSRLSLNHPGSKFGFSL 60
Query: 58 NAQVKDSFVVRAE-ANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEE-EVKAP 115
+ +V++ F+VRAE N EAE+ E VA A++E VEE E K
Sbjct: 61 DTRVRNEFIVRAEEGNTEAESEE----------------FVAEIADTEGNVEEVVEAKPT 104
Query: 116 RKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSR 175
RKPR+KLGD+MGILN++A+E +E RP+P+IRTGD+VEIKLEVPEN+RRLSIYKGIVMSR
Sbjct: 105 RKPRIKLGDVMGILNQKAIEVAEKVRPVPEIRTGDIVEIKLEVPENKRRLSIYKGIVMSR 164
Query: 176 QNAGIHTTIRIRRIIAGIGVEIVFPL 201
QNAGIHTTIRIRRIIAGIGVEIVFP+
Sbjct: 165 QNAGIHTTIRIRRIIAGIGVEIVFPI 190
>sp|Q8RXX5|RK192_ARATH 50S ribosomal protein L19-2, chloroplastic OS=Arabidopsis thaliana
GN=At5g47190 PE=2 SV=1
Length = 229
Score = 180 bits (456), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 138/203 (67%), Gaps = 15/203 (7%)
Query: 2 GSQVLPQALHWIPRSSTQCIPSKRLGFSTVLSRGPFVSHGVSVSAKPIGW---NLGFFVN 58
S +LPQALH IPR T SK LG S++L R V+ +SVS + N GF ++
Sbjct: 4 SSHLLPQALHMIPR--TPSFSSKNLGVSSILPRASSVNSRLSVSRVFLNHSSSNFGFAID 61
Query: 59 AQVKDSFVVRAEANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEEEVKAPRKP 118
++ + F+ +AE + E E EAV + V E E E V EE K P K
Sbjct: 62 SKKRKEFIAKAEESTEGE---------TEAV-VENAVETEAEGEGEATVAAEEAKPPWKT 111
Query: 119 RVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGIVMSRQNA 178
RVKLGDIMG+LNK+A+E +E+ RP+P +RTGD+VEIKLEVPEN+RRLSIYKGIVMSRQNA
Sbjct: 112 RVKLGDIMGLLNKKAIEVAETVRPVPGLRTGDIVEIKLEVPENKRRLSIYKGIVMSRQNA 171
Query: 179 GIHTTIRIRRIIAGIGVEIVFPL 201
GIHTTIRIRRIIAGIGVEIVFP+
Sbjct: 172 GIHTTIRIRRIIAGIGVEIVFPI 194
>sp|P82413|RK19_SPIOL 50S ribosomal protein L19, chloroplastic OS=Spinacia oleracea
GN=RPL19 PE=1 SV=2
Length = 233
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 141/210 (67%), Gaps = 21/210 (10%)
Query: 1 MGSQVLPQALHWIPRS-STQCIP-SKRLGFSTVLSRGPFVSHGVS-------VSAKPIGW 51
M S+VLPQAL IP + S QC P K+LGF +R +S S+
Sbjct: 1 MASKVLPQALLVIPSNHSLQCPPLKKQLGFPIDSNRRFSLSSNCRSNLMVSRASSNLFSS 60
Query: 52 NLGFFVNAQVKDSFVVRAEANEEAEANESIEEEQNEAVQAQGDVVVAVEAESEDKVEEEE 111
N + ++SFVVR+EA + ++A ++ AV A+ ++ V EAE+E++
Sbjct: 61 NFSSIFSFPARNSFVVRSEAEDSSDA-----PAESVAVVAEEELPVESEAEAEER----- 110
Query: 112 VKAPRKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRRRLSIYKGI 171
PR+ RVKLGDIMGILNK+AV A+E RP+P IRTGD+V+I+LEVPEN+RRLS+YKGI
Sbjct: 111 --PPRQQRVKLGDIMGILNKKAVHAAEELRPVPGIRTGDIVQIRLEVPENKRRLSVYKGI 168
Query: 172 VMSRQNAGIHTTIRIRRIIAGIGVEIVFPL 201
V+SRQNAGIHTTIRIRRIIAG+GVEIVFPL
Sbjct: 169 VISRQNAGIHTTIRIRRIIAGVGVEIVFPL 198
>sp|Q4JV09|RL19_CORJK 50S ribosomal protein L19 OS=Corynebacterium jeikeium (strain K411)
GN=rplS PE=3 SV=1
Length = 113
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL+K V+A++ IP+ R GD +++ ++V E ++ RL +++G+V+ RQN+GI T
Sbjct: 1 MHILDK--VDAAQLRDDIPEFRAGDTLDVHVKVIEGSKSRLQVFRGVVIRRQNSGIRETF 58
Query: 185 RIRRIIAGIGVEIVFPL 201
IR++ GIGVE FP+
Sbjct: 59 TIRKVSFGIGVERTFPV 75
>sp|Q7V668|RL19_PROMM 50S ribosomal protein L19 OS=Prochlorococcus marinus (strain MIT
9313) GN=rplS PE=3 SV=1
Length = 158
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 135 EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGI 193
EAS+ + + DI GD V + + + E N+ R+ Y+G+V+++++ GIH TI +RRI GI
Sbjct: 51 EASQQKSDLNDIYVGDTVRVGVRISEGNKERIQPYEGVVIAKRHGGIHETITVRRIFQGI 110
Query: 194 GVEIVFPL 201
GVE VF L
Sbjct: 111 GVERVFML 118
>sp|P56356|RK19_CHLVU 50S ribosomal protein L19, chloroplastic OS=Chlorella vulgaris
GN=rpl19 PE=3 SV=1
Length = 130
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+A+++ + +PD+R GD+V I + + E N++R+ ++G V+S+ AG ++T+ +R+ +
Sbjct: 9 QAIQSGTIKTELPDVRVGDLVRIGVSIQEGNKQRIQPFEGTVISKHQAGANSTVTVRKSL 68
Query: 191 AGIGVEIVFPL 201
GIGVE VFPL
Sbjct: 69 QGIGVERVFPL 79
>sp|Q3ALW5|RL19_SYNSC 50S ribosomal protein L19 OS=Synechococcus sp. (strain CC9605)
GN=rplS PE=3 SV=2
Length = 132
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R+ E+S+ + +P+I GD V + + + E N+ R+ Y+G+V+S+++ G++ TI +RRI
Sbjct: 22 RSFESSQQKDDLPEIYVGDTVRVGVRISEGNKERVQPYEGVVISKRHGGLNQTITVRRIF 81
Query: 191 AGIGVEIVFPL 201
GIGVE VF L
Sbjct: 82 QGIGVERVFML 92
>sp|B2GFY5|RL19_KOCRD 50S ribosomal protein L19 OS=Kocuria rhizophila (strain ATCC 9341 /
DSM 348 / NBRC 103217 / DC2201) GN=rplS PE=3 SV=1
Length = 120
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL++ ++A +PD R GD + + + + E NR R+ ++KG VM RQ +G+ T
Sbjct: 1 MNILDQ--LDAKSLRDDVPDFRPGDTLNVHVNIVEGNRSRVQVFKGFVMGRQGSGVRETF 58
Query: 185 RIRRIIAGIGVEIVFPL 201
+R++ G+GVE FP+
Sbjct: 59 TVRKVSFGVGVERTFPV 75
>sp|Q46GU7|RL19_PROMT 50S ribosomal protein L19 OS=Prochlorococcus marinus (strain
NATL2A) GN=rplS PE=3 SV=1
Length = 162
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
Query: 97 VAVEAESEDKVEEEEVKAPRKPRVKLGDIMGILNK------RAVEASESERPIPDIRTGD 150
V +E ES + E+ EVK + + K G + I N + E ++ + +PD+ GD
Sbjct: 13 VKIEDES-NASEDSEVKTASETKSK-GKKISIQNLSPAEIIKTFEDAQLGKDLPDVYVGD 70
Query: 151 VVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGIGVEIVF 199
V + + + E N+ R+ Y+G+V+++++ GIH TI +RRI GIGVE +F
Sbjct: 71 TVRVGVRISEGNKERVQPYEGVVIAKRHGGIHQTITVRRIFQGIGVERIF 120
>sp|Q7V2K1|RL19_PROMP 50S ribosomal protein L19 OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=rplS PE=3 SV=1
Length = 160
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+ E + ++ +P+I GD V++ +++ E N+ R+ Y+G+V+++++ G+H TI +RRI
Sbjct: 50 KEFEREQLKKQLPEIYVGDTVKVGVKITEGNKERVQPYEGVVIAKRHGGLHQTITVRRIF 109
Query: 191 AGIGVEIVFPL 201
GIGVE VF L
Sbjct: 110 QGIGVERVFML 120
>sp|B8HT34|RL19_CYAP4 50S ribosomal protein L19 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=rplS PE=3 SV=1
Length = 120
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +P+I GD V++ + + E N+ R Y+GIV++++N+GI+ TI +RRI
Sbjct: 8 RSLEAEQLKSNLPEIHVGDTVKVGVIIQEGNKERTQPYEGIVIAKRNSGINATITVRRIF 67
Query: 191 AGIGVEIVFPL 201
G+GVE VF L
Sbjct: 68 QGVGVERVFLL 78
>sp|B2TJ32|RL19_CLOBB 50S ribosomal protein L19 OS=Clostridium botulinum (strain Eklund
17B / Type B) GN=rplS PE=3 SV=1
Length = 116
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
RA+EA + +PD + GD V++ ++V E R R+ +++G V+ +QN G+ T +RR+
Sbjct: 6 RAIEAEQLRTDLPDFKIGDNVKVYVKVTEGTRERVQMFEGTVIKKQNGGLRETFTVRRVA 65
Query: 191 AGIGVEIVFPL 201
G GVE FP+
Sbjct: 66 YGCGVERTFPM 76
>sp|C4LJB9|RL19_CORK4 50S ribosomal protein L19 OS=Corynebacterium kroppenstedtii (strain
DSM 44385 / CCUG 35717) GN=rplS PE=3 SV=1
Length = 113
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNAGIHTTI 184
M IL+K V+A+ IP+ R+GD V++ ++V E ++ R+ +++G+V+ RQ +G+ T
Sbjct: 1 MNILDK--VDAASLRDDIPEFRSGDTVDVHVKVIEGQKSRIQVFRGVVIRRQGSGVRETF 58
Query: 185 RIRRIIAGIGVEIVFPL 201
+R++ GIGVE FP+
Sbjct: 59 TVRKVSFGIGVERTFPV 75
>sp|Q9TJQ7|RK19_PROWI 50S ribosomal protein L19, plastid OS=Prototheca wickerhamii
GN=rpl19 PE=3 SV=1
Length = 129
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+ +E S+ +PDI+ GD++ + + + E+ ++R+ ++G V++ AG++TTI +R+I+
Sbjct: 9 KKIEYKFSKHQLPDIKVGDLIRLGISIQESGKQRVQPFEGTVIALHKAGLNTTITVRKIL 68
Query: 191 AGIGVEIVFPL 201
GIGVE VFP+
Sbjct: 69 QGIGVERVFPI 79
>sp|B5YK97|RL19_THEYD 50S ribosomal protein L19 OS=Thermodesulfovibrio yellowstonii
(strain ATCC 51303 / DSM 11347 / YP87) GN=rplS PE=3 SV=1
Length = 120
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M L RA+E + IPD + GD V++ ++V E ++ R+ +++G+V++R+ G+ T
Sbjct: 1 MNQLIIRAIEERFKKSNIPDFKPGDTVKVHVKVKEGDKERIQVFEGVVIARRGGGLRETF 60
Query: 185 RIRRIIAGIGVEIVFPL 201
+R+I G+GVE VFPL
Sbjct: 61 TVRKISFGVGVERVFPL 77
>sp|Q31C59|RL19_PROM9 50S ribosomal protein L19 OS=Prochlorococcus marinus (strain MIT
9312) GN=rplS PE=3 SV=2
Length = 126
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 135 EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAGI 193
E + ++ +P+I GD V++ + + E N+ R+ Y+G+V+++++ GIH TI +RRI GI
Sbjct: 19 ENEQLKKELPEIYVGDTVKVGVRITEGNKERVQPYEGVVIAKRHGGIHQTITVRRIFQGI 78
Query: 194 GVEIVFPL 201
GVE VF L
Sbjct: 79 GVERVFML 86
>sp|A8M681|RL19_SALAI 50S ribosomal protein L19 OS=Salinispora arenicola (strain CNS-205)
GN=rplS PE=3 SV=1
Length = 118
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL+ A++A +PD R GD V++ V E NR R+ I++G+V+ RQ G+ T
Sbjct: 1 MNILD--ALDAQSKRTDLPDFRAGDTVKVHARVVEGNRSRVQIFQGVVIRRQGDGLRETF 58
Query: 185 RIRRIIAGIGVEIVFPL 201
+R+I G+GVE +P+
Sbjct: 59 LVRKISFGVGVERTYPI 75
>sp|Q02ZX9|RL19_LACLS 50S ribosomal protein L19 OS=Lactococcus lactis subsp. cremoris
(strain SK11) GN=rplS PE=3 SV=1
Length = 114
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
++ A++ IPD R GD V + +V E R R+ I++G+V++R+N+GI+ T +R+I
Sbjct: 6 SINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKNSGINETYTVRKISN 65
Query: 192 GIGVEIVFPL 201
G+GVE +FP+
Sbjct: 66 GVGVERIFPV 75
>sp|A2RLS5|RL19_LACLM 50S ribosomal protein L19 OS=Lactococcus lactis subsp. cremoris
(strain MG1363) GN=rplS PE=3 SV=1
Length = 114
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
++ A++ IPD R GD V + +V E R R+ I++G+V++R+N+GI+ T +R+I
Sbjct: 6 SINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQIFEGVVIARKNSGINETYTVRKISN 65
Query: 192 GIGVEIVFPL 201
G+GVE +FP+
Sbjct: 66 GVGVERIFPV 75
>sp|O78409|RK19_GUITH 50S ribosomal protein L19, chloroplastic OS=Guillardia theta
GN=rpl19 PE=3 SV=2
Length = 118
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 134 VEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 192
VE++ S + +P ++ GD V + + + E N+ R+ +G+++S+ N GI+ TI IRR++ G
Sbjct: 11 VESNHSNKTLPQLQVGDTVRLGVSITEGNKERIQATEGVIISKSNCGINLTITIRRVLQG 70
Query: 193 IGVEIVFPL 201
IG+E V+ L
Sbjct: 71 IGIERVYLL 79
>sp|A4X4H9|RL19_SALTO 50S ribosomal protein L19 OS=Salinispora tropica (strain ATCC
BAA-916 / DSM 44818 / CNB-440) GN=rplS PE=3 SV=1
Length = 118
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL+ A++A +PD R GD V++ V E NR R+ I++G+V+ RQ G+ T
Sbjct: 1 MNILD--ALDAQSKRTDLPDFRAGDTVKVHARVVEGNRSRVQIFQGVVIRRQGDGLRETF 58
Query: 185 RIRRIIAGIGVEIVFPL 201
+R+I G+GVE +P+
Sbjct: 59 LVRKISFGVGVERTYPV 75
>sp|A0LV69|RL19_ACIC1 50S ribosomal protein L19 OS=Acidothermus cellulolyticus (strain
ATCC 43068 / 11B) GN=rplS PE=3 SV=1
Length = 121
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
V+AS IPD R GD +++ + V E NR R+ +++G+V+ RQ +G+ T +R++
Sbjct: 6 TVDASSLRTDIPDFRPGDTLKVHVRVVEGNRSRVQVFQGVVIRRQGSGVRETFTVRKVSF 65
Query: 192 GIGVEIVFPL 201
G+GVE FP+
Sbjct: 66 GVGVERTFPV 75
>sp|Q7U583|RL19_SYNPX 50S ribosomal protein L19 OS=Synechococcus sp. (strain WH8102)
GN=rplS PE=3 SV=1
Length = 154
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 114 APRKPRVKLGDIMGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIV 172
AP P KL I +A E + + +P+I GD V + + + E N+ R+ Y+G+V
Sbjct: 29 APTSPAQKLSAEALI---KAFETEQMKSDLPEIYVGDTVRVGVRISEGNKERVQPYEGVV 85
Query: 173 MSRQNAGIHTTIRIRRIIAGIGVEIVFPL 201
+S+++ G++ TI +RRI GIGVE VF L
Sbjct: 86 ISKRHGGMNQTITVRRIFQGIGVERVFML 114
>sp|B1VG80|RL19_CORU7 50S ribosomal protein L19 OS=Corynebacterium urealyticum (strain
ATCC 43042 / DSM 7109) GN=rplS PE=3 SV=1
Length = 113
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL+K V+A++ IP+ R GD V++ L+V E ++ R+ +++G+V+ RQ +GI T
Sbjct: 1 MHILDK--VDAAQLRDDIPEFRAGDTVDVHLKVIEGSKSRVQVFRGVVIKRQGSGIRETF 58
Query: 185 RIRRIIAGIGVEIVFPL 201
+R++ GIGVE P+
Sbjct: 59 TVRKVSFGIGVERTIPV 75
>sp|Q3MA22|RL19_ANAVT 50S ribosomal protein L19 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplS PE=3 SV=2
Length = 120
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +P+I GD V + +++ E ++ R+ Y+G+V++R+N GI+ TI +RR+
Sbjct: 8 RSIEAEQLKSNLPEIYIGDTVRVGVKIKEGDKYRVQPYEGVVIARRNGGINETITVRRVF 67
Query: 191 AGIGVEIVFPL 201
G+GVE VF L
Sbjct: 68 QGVGVERVFLL 78
>sp|A5N817|RL19_CLOK5 50S ribosomal protein L19 OS=Clostridium kluyveri (strain ATCC 8527
/ DSM 555 / NCIMB 10680) GN=rplS PE=3 SV=1
Length = 115
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+ +E+ +P+ GD V++ + + E NR+R+ +++GIV+ RQN G+ T +RR+
Sbjct: 6 KQIESQYIRTDLPNFNIGDTVKVHVRIKEGNRQRVQVFEGIVLKRQNGGVRETFTVRRVA 65
Query: 191 AGIGVEIVFPL 201
G+GVE FP+
Sbjct: 66 YGVGVERTFPV 76
>sp|A8MHC5|RL19_ALKOO 50S ribosomal protein L19 OS=Alkaliphilus oremlandii (strain
OhILAs) GN=rplS PE=3 SV=1
Length = 115
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M IL R + + + ++ +P+ GD V++ +++ E +R R+ I++GIV+ RQ GI T
Sbjct: 1 MDIL--RTLASEQLKKDVPEFSNGDTVKVHVKIKEGSRERIQIFEGIVIKRQGGGIAETF 58
Query: 185 RIRRIIAGIGVEIVFPL 201
+RRI +G+GVE FP+
Sbjct: 59 TVRRIASGVGVERTFPV 75
>sp|Q9CH65|RL19_LACLA 50S ribosomal protein L19 OS=Lactococcus lactis subsp. lactis
(strain IL1403) GN=rplS PE=3 SV=1
Length = 114
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
++ A++ IPD R GD V + +V E R R+ +++G+V++R+N+GI+ T +R+I
Sbjct: 6 SINAAQLRTDIPDFRPGDTVRVHAKVVEGTRERIQMFEGVVIARKNSGINETYTVRKISN 65
Query: 192 GIGVEIVFPL 201
G+GVE +FP+
Sbjct: 66 GVGVERIFPV 75
>sp|B2JA71|RL19_NOSP7 50S ribosomal protein L19 OS=Nostoc punctiforme (strain ATCC 29133
/ PCC 73102) GN=rplS PE=3 SV=1
Length = 120
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +PDI GD V++ +++ E + R+ Y+G+V++++N GI+ TI +R++
Sbjct: 8 RSIEAEQLKSNLPDIYVGDTVKVGVKIKEGEKYRVQPYEGVVIAKRNGGINETITVRKVF 67
Query: 191 AGIGVEIVFPL 201
G+GVE VF L
Sbjct: 68 QGVGVERVFLL 78
>sp|A6TRS5|RL19_ALKMQ 50S ribosomal protein L19 OS=Alkaliphilus metalliredigens (strain
QYMF) GN=rplS PE=3 SV=1
Length = 117
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+ ++A++ ++ I D TGD +++ + + E R R+ +++GIV+ RQ GI T +RRI
Sbjct: 5 KGIDAAQLKKDIIDFNTGDTIKVHVRIKEGTRERIQVFEGIVIKRQGGGIAETFTVRRIS 64
Query: 191 AGIGVEIVFPL 201
G+GVE FP+
Sbjct: 65 YGVGVERTFPV 75
>sp|B4S7M0|RL19_PROA2 50S ribosomal protein L19 OS=Prosthecochloris aestuarii (strain DSM
271 / SK 413) GN=rplS PE=3 SV=1
Length = 122
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 134 VEASESERPIPDIRTGDVVEIKLEVPENRR-RLSIYKGIVMSRQNAGIHTTIRIRRIIAG 192
VEA++ + +P+IR GD ++++L V E + RL Y+G+++S AG + TI +R+I G
Sbjct: 8 VEAAQERQDLPEIRPGDTIKMQLRVIEGEKERLQAYEGVIISDSGAGTNRTITVRKISNG 67
Query: 193 IGVEIVFPL 201
+GVE + PL
Sbjct: 68 VGVERIIPL 76
>sp|Q895M1|RL19_CLOTE 50S ribosomal protein L19 OS=Clostridium tetani (strain
Massachusetts / E88) GN=rplS PE=3 SV=2
Length = 115
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+A+EA + +P + GD V++ +++ E R R+ +++G V+ RQN G+ T +RR+
Sbjct: 6 KAIEAEQIRTDLPAFKVGDTVKVHVKIKEGTRERIQVFEGTVIKRQNGGLRETFTVRRLA 65
Query: 191 AGIGVEIVFPL 201
G+GVE FP+
Sbjct: 66 YGVGVERTFPV 76
>sp|Q3AWM9|RL19_SYNS9 50S ribosomal protein L19 OS=Synechococcus sp. (strain CC9902)
GN=rplS PE=3 SV=2
Length = 131
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R E+++ + +P+I GD V + + + E NR R+ Y+G+V+S+++ G++ TI +RRI
Sbjct: 21 REFESAQQKTDLPEIYVGDTVRVGVRISEGNRERVQPYEGVVISKRHGGMNQTITVRRIF 80
Query: 191 AGIGVEIVF 199
GIGVE VF
Sbjct: 81 QGIGVERVF 89
>sp|B9M596|RL19_GEOSF 50S ribosomal protein L19 OS=Geobacter sp. (strain FRC-32) GN=rplS
PE=3 SV=1
Length = 118
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
A+E + ++ IP R GD V++++++ E ++ R+ ++G+V+ RQN GI + +R+I
Sbjct: 6 AIEMEQMKKNIPGFRPGDTVKVQVKIVEGDKSRIQAFQGVVIGRQNGGIRESFTVRKISN 65
Query: 192 GIGVEIVFPL 201
G+GVE FPL
Sbjct: 66 GVGVERSFPL 75
>sp|Q8YLK1|RL19_NOSS1 50S ribosomal protein L19 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplS PE=3 SV=2
Length = 120
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPEN-RRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
R++EA + + +P+I GD V + +++ E + R+ Y+G+V++R+N GI+ TI +RR+
Sbjct: 8 RSIEAEQLKSNLPEIYIGDTVRVGVKIKEGEKYRVQPYEGVVIARRNGGINETITVRRVF 67
Query: 191 AGIGVEIVFPL 201
G+GVE VF L
Sbjct: 68 QGVGVERVFLL 78
>sp|Q8PMY0|RL19_XANAC 50S ribosomal protein L19 OS=Xanthomonas axonopodis pv. citri
(strain 306) GN=rplS PE=3 SV=1
Length = 135
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 126 MGILNKRAV---EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIH 181
M LNK + EA++ +R +P+ GD V + ++V E NR R+ Y+G+V+ +NAG++
Sbjct: 1 MSKLNKTILADFEAAQIQRKLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLN 60
Query: 182 TTIRIRRIIAGIGVEIVF 199
++ +R+I G GVE VF
Sbjct: 61 SSFTVRKISHGFGVERVF 78
>sp|Q3BVY7|RL19_XANC5 50S ribosomal protein L19 OS=Xanthomonas campestris pv. vesicatoria
(strain 85-10) GN=rplS PE=3 SV=1
Length = 135
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 126 MGILNKRAV---EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIH 181
M LNK + EA++ +R +P+ GD V + ++V E NR R+ Y+G+V+ +NAG++
Sbjct: 1 MSKLNKTILADFEAAQIQRKLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLN 60
Query: 182 TTIRIRRIIAGIGVEIVF 199
++ +R+I G GVE VF
Sbjct: 61 SSFTVRKISHGFGVERVF 78
>sp|A6W7V1|RL19_KINRD 50S ribosomal protein L19 OS=Kineococcus radiotolerans (strain ATCC
BAA-149 / DSM 14245 / SRS30216) GN=rplS PE=3 SV=1
Length = 117
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M +L+ V+A+ +PD R GD + + ++V E NR R+ ++KGIV+ R GI
Sbjct: 1 MNLLDN--VDAASLRTDVPDFRAGDTLNVHVKVVEGNRSRVQVFKGIVIRRTGGGIREAF 58
Query: 185 RIRRIIAGIGVEIVFPL 201
+R++ G+GVE FPL
Sbjct: 59 TVRKVSFGVGVERTFPL 75
>sp|B2V4E6|RL19_CLOBA 50S ribosomal protein L19 OS=Clostridium botulinum (strain Alaska
E43 / Type E3) GN=rplS PE=3 SV=1
Length = 116
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
RA+EA + +P+ + GD V++ ++V E R R+ +++G V+ +QN G+ T +RR+
Sbjct: 6 RAIEAEQLRTDLPNFKIGDNVKVYVKVTEGTRERVQMFEGTVIKKQNGGLRETFTVRRVA 65
Query: 191 AGIGVEIVFPL 201
G GVE FP+
Sbjct: 66 YGCGVERTFPM 76
>sp|Q5H389|RL19_XANOR 50S ribosomal protein L19 OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=rplS PE=3 SV=2
Length = 135
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 126 MGILNKRAV---EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIH 181
M LNK + EA++ +R +P+ GD V + ++V E NR R+ Y+G+V+ +NAG++
Sbjct: 1 MSKLNKTILADFEAAQIQRKLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLN 60
Query: 182 TTIRIRRIIAGIGVEIVF 199
+ +R+I G GVE VF
Sbjct: 61 SAFTVRKISHGFGVERVF 78
>sp|Q2P650|RL19_XANOM 50S ribosomal protein L19 OS=Xanthomonas oryzae pv. oryzae (strain
MAFF 311018) GN=rplS PE=3 SV=1
Length = 135
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 126 MGILNKRAV---EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIH 181
M LNK + EA++ +R +P+ GD V + ++V E NR R+ Y+G+V+ +NAG++
Sbjct: 1 MSKLNKTILADFEAAQIQRKLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLN 60
Query: 182 TTIRIRRIIAGIGVEIVF 199
+ +R+I G GVE VF
Sbjct: 61 SAFTVRKISHGFGVERVF 78
>sp|Q8PBC0|RL19_XANCP 50S ribosomal protein L19 OS=Xanthomonas campestris pv. campestris
(strain ATCC 33913 / NCPPB 528 / LMG 568) GN=rplS PE=3
SV=1
Length = 135
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 126 MGILNKRAV---EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIH 181
M LNK + EA++ +R +P+ GD V + ++V E NR R+ Y+G+V+ +NAG++
Sbjct: 1 MSKLNKTILADFEAAQIQRQLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLN 60
Query: 182 TTIRIRRIIAGIGVEIVF 199
+ +R+I G GVE VF
Sbjct: 61 SAFTVRKISHGFGVERVF 78
>sp|B0RXD6|RL19_XANCB 50S ribosomal protein L19 OS=Xanthomonas campestris pv. campestris
(strain B100) GN=rplS PE=3 SV=1
Length = 135
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 126 MGILNKRAV---EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIH 181
M LNK + EA++ +R +P+ GD V + ++V E NR R+ Y+G+V+ +NAG++
Sbjct: 1 MSKLNKTILADFEAAQIQRQLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLN 60
Query: 182 TTIRIRRIIAGIGVEIVF 199
+ +R+I G GVE VF
Sbjct: 61 SAFTVRKISHGFGVERVF 78
>sp|Q4US85|RL19_XANC8 50S ribosomal protein L19 OS=Xanthomonas campestris pv. campestris
(strain 8004) GN=rplS PE=3 SV=1
Length = 135
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 126 MGILNKRAV---EASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIH 181
M LNK + EA++ +R +P+ GD V + ++V E NR R+ Y+G+V+ +NAG++
Sbjct: 1 MSKLNKTILADFEAAQIQRQLPEFNQGDTVVVNVKVKEGNRERVQAYEGVVIGTKNAGLN 60
Query: 182 TTIRIRRIIAGIGVEIVF 199
+ +R+I G GVE VF
Sbjct: 61 SAFTVRKISHGFGVERVF 78
>sp|Q6NGI8|RL19_CORDI 50S ribosomal protein L19 OS=Corynebacterium diphtheriae (strain
ATCC 700971 / NCTC 13129 / Biotype gravis) GN=rplS PE=3
SV=1
Length = 113
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 126 MGILNKRAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTI 184
M +L+K V+A+ IP R GD + + ++V E ++ R+ ++KG+V+ RQ AG+ T
Sbjct: 1 MNLLDK--VDAASLRDDIPAFRPGDTLNVHVKVIEGSKSRIQVFKGVVIRRQGAGVRETF 58
Query: 185 RIRRIIAGIGVEIVFPL 201
IR++ GIGVE FP+
Sbjct: 59 TIRKVSFGIGVERTFPV 75
>sp|A3DDH1|RL19_CLOTH 50S ribosomal protein L19 OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=rplS PE=3 SV=1
Length = 114
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+A+E + ++ +PD GD V + ++V E NR R+ ++G V++++ +GI T +R+I
Sbjct: 5 KAIEQEQLKKDVPDFSIGDYVRVNVKVKEGNRERIQAFEGTVIAKKGSGISETFTVRKIS 64
Query: 191 AGIGVEIVFPL 201
G+GVE +FP+
Sbjct: 65 YGVGVERIFPV 75
>sp|Q2RJV3|RL19_MOOTA 50S ribosomal protein L19 OS=Moorella thermoacetica (strain ATCC
39073) GN=rplS PE=3 SV=1
Length = 113
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 133 AVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIA 191
+E + IPD R GD V + ++V E NR R+ I++G+V+ R+ GI+ T +RR+
Sbjct: 6 TLEKEQLRTDIPDFRPGDTVRVHVKVVEGNRERIQIFEGVVIGRRGRGINETFTVRRVSY 65
Query: 192 GIGVEIVFPL 201
G+ VE +FPL
Sbjct: 66 GVAVERIFPL 75
>sp|B5YFD4|RL19_DICT6 50S ribosomal protein L19 OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=rplS PE=3 SV=1
Length = 118
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 134 VEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 192
+E ++ IP+I GD V + + E ++ R+ +Y+G+V+++++ GI TI +R+++ G
Sbjct: 8 LEKEYMKKDIPEIWPGDTVRVHYRIVEGDKERIQVYEGVVIAKKHGGIRETITVRKVVQG 67
Query: 193 IGVEIVFPL 201
+GVE +FPL
Sbjct: 68 VGVERIFPL 76
>sp|B8E2G3|RL19_DICTD 50S ribosomal protein L19 OS=Dictyoglomus turgidum (strain Z-1310 /
DSM 6724) GN=rplS PE=3 SV=1
Length = 118
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 134 VEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRIIAG 192
+E ++ IP+I GD V + + E ++ R+ +Y+G+V+++++ GI TI +R+++ G
Sbjct: 8 LEKEYMKKDIPEIWPGDTVRVHYRIVEGDKERIQVYEGVVIAKKHGGIRETITVRKVVQG 67
Query: 193 IGVEIVFPL 201
+GVE +FPL
Sbjct: 68 VGVERIFPL 76
>sp|A0Q0X9|RL19_CLONN 50S ribosomal protein L19 OS=Clostridium novyi (strain NT) GN=rplS
PE=3 SV=1
Length = 116
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 132 RAVEASESERPIPDIRTGDVVEIKLEVPE-NRRRLSIYKGIVMSRQNAGIHTTIRIRRII 190
+A+EA + + I + GD V + + + E N+ RL ++G V+ RQN GI T +RR+
Sbjct: 6 KAIEAEQVKTDITEFNVGDTVRVNVRIKEGNKERLQAFEGTVIKRQNGGIRETFTVRRVA 65
Query: 191 AGIGVEIVFPL 201
G GVE FP+
Sbjct: 66 YGTGVERTFPV 76
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.133 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,018,196
Number of Sequences: 539616
Number of extensions: 2579132
Number of successful extensions: 18638
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 265
Number of HSP's that attempted gapping in prelim test: 16251
Number of HSP's gapped (non-prelim): 1802
length of query: 201
length of database: 191,569,459
effective HSP length: 112
effective length of query: 89
effective length of database: 131,132,467
effective search space: 11670789563
effective search space used: 11670789563
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)