Query 028969
Match_columns 201
No_of_seqs 116 out of 547
Neff 7.5
Searched_HMMs 13730
Date Mon Mar 25 08:25:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028969.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028969hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1f3ka_ g.3.6.1 (A:) Conotoxin 26.3 7.2 0.00052 18.5 0.2 11 21-31 5-15 (26)
2 d1qwta_ b.26.1.3 (A:) Interfer 25.8 27 0.0019 26.2 3.6 28 160-199 156-183 (239)
3 d1s3si_ d.15.1.2 (I:) p47 {Rat 14.9 4.2 0.0003 23.3 -2.7 13 150-162 33-45 (50)
4 d1rpxa_ c.1.2.2 (A:) D-ribulos 13.8 31 0.0023 25.5 1.4 12 23-34 36-47 (230)
5 d1tqja_ c.1.2.2 (A:) D-ribulos 13.6 33 0.0024 25.0 1.5 12 23-34 28-39 (221)
6 d1tqxa_ c.1.2.2 (A:) D-ribulos 13.6 33 0.0024 24.9 1.5 11 23-33 28-38 (221)
7 d2flia1 c.1.2.2 (A:3-219) D-ri 12.1 39 0.0028 24.5 1.5 11 23-33 27-37 (217)
8 d1sfpa_ b.23.1.1 (A:) Acidic s 12.1 1.2E+02 0.0091 18.4 4.1 31 3-35 32-62 (111)
9 d1h1ya_ c.1.2.2 (A:) D-ribulos 12.0 40 0.0029 24.5 1.5 12 23-34 27-38 (220)
10 d1sppb_ b.23.1.1 (B:) Major se 10.1 1.5E+02 0.011 18.1 4.0 31 3-35 34-64 (112)
No 1
>d1f3ka_ g.3.6.1 (A:) Conotoxin {Conus textile, Tx VII [TaxId: 6494]}
Probab=26.34 E-value=7.2 Score=18.54 Aligned_cols=11 Identities=55% Similarity=1.069 Sum_probs=8.8
Q ss_pred ccCCCeeeeee
Q 028969 21 ALPCDVLSVDA 31 (201)
Q Consensus 21 ~~PC~~lslDv 31 (201)
.-||+..|+|.
T Consensus 5 depcdvfsldc 15 (26)
T d1f3ka_ 5 DEPCDVFSLDC 15 (26)
T ss_dssp TCCCCSSSCCS
T ss_pred CCCccEEEEec
Confidence 45899999885
No 2
>d1qwta_ b.26.1.3 (A:) Interferon regulatory factor 3 (IRF3), transactivation domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.84 E-value=27 Score=26.15 Aligned_cols=28 Identities=25% Similarity=0.397 Sum_probs=18.9
Q ss_pred eEeeeCCCCCCCCCCCCCceEEecCCceeEEEEeEEEeee
Q 028969 160 HDLSFGPKYPGIHNPLDGTVRMLHDTSGTFKYYIKVWPWF 199 (201)
Q Consensus 160 ~~lsFG~~~~~~~~PLDg~~~~~~~~~~~~~Y~lkvVPT~ 199 (201)
=.|.||+..|. ..|+...-.+ ++|||+.
T Consensus 156 i~lcFGeewpd-~~p~ekkLI~-----------VqV~p~~ 183 (239)
T d1qwta_ 156 LWFCVGESWPQ-DQPWTKRLVM-----------VKVVPTC 183 (239)
T ss_dssp EEEEECCSCTT-CCTTTTCCEE-----------EEEEEHH
T ss_pred EEEEeccccCC-CCCcccceEE-----------EEEEHHH
Confidence 47999999985 3576653222 6777764
No 3
>d1s3si_ d.15.1.2 (I:) p47 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=14.91 E-value=4.2 Score=23.34 Aligned_cols=13 Identities=38% Similarity=0.560 Sum_probs=6.0
Q ss_pred CcceeeeEEeeEe
Q 028969 150 AKNVNVSHVIHDL 162 (201)
Q Consensus 150 ~~~~N~sH~I~~l 162 (201)
..+||.||+|..+
T Consensus 33 v~rFN~~Htv~di 45 (50)
T d1s3si_ 33 VQKFNHSHRISDI 45 (50)
T ss_dssp -----CCCCHHHH
T ss_pred EEEccCccCHHHH
Confidence 3478999988654
No 4
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=13.84 E-value=31 Score=25.46 Aligned_cols=12 Identities=42% Similarity=0.736 Sum_probs=10.2
Q ss_pred CCCeeeeeeeec
Q 028969 23 PCDVLSVDAIDM 34 (201)
Q Consensus 23 PC~~lslDv~D~ 34 (201)
-+.++|+||||-
T Consensus 36 g~d~iHiDImDG 47 (230)
T d1rpxa_ 36 GCDWIHVDVMDG 47 (230)
T ss_dssp TCCCEEEEEEBS
T ss_pred CCCEEEEeCccC
Confidence 478999999993
No 5
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]}
Probab=13.59 E-value=33 Score=25.01 Aligned_cols=12 Identities=33% Similarity=0.432 Sum_probs=10.2
Q ss_pred CCCeeeeeeeec
Q 028969 23 PCDVLSVDAIDM 34 (201)
Q Consensus 23 PC~~lslDv~D~ 34 (201)
-+.+||+|+||-
T Consensus 28 g~d~iHiDImDG 39 (221)
T d1tqja_ 28 GADWIHVDVMDG 39 (221)
T ss_dssp TCSEEEEEEEBS
T ss_pred CCCEEEEECccC
Confidence 478999999994
No 6
>d1tqxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Plasmodium falciparum [TaxId: 5833]}
Probab=13.58 E-value=33 Score=24.92 Aligned_cols=11 Identities=18% Similarity=0.468 Sum_probs=9.8
Q ss_pred CCCeeeeeeee
Q 028969 23 PCDVLSVDAID 33 (201)
Q Consensus 23 PC~~lslDv~D 33 (201)
-++++|+|+||
T Consensus 28 ~~d~iHiDimD 38 (221)
T d1tqxa_ 28 GAEWIHLDVMD 38 (221)
T ss_dssp TCSEEEEEEEB
T ss_pred CCCEEEEECcc
Confidence 47899999999
No 7
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]}
Probab=12.15 E-value=39 Score=24.51 Aligned_cols=11 Identities=18% Similarity=0.522 Sum_probs=9.8
Q ss_pred CCCeeeeeeee
Q 028969 23 PCDVLSVDAID 33 (201)
Q Consensus 23 PC~~lslDv~D 33 (201)
-+.++|+|+||
T Consensus 27 g~d~iHiDimD 37 (217)
T d2flia1 27 DAEYVHIDIMD 37 (217)
T ss_dssp TCCEEEEEEEB
T ss_pred CCCEEEEEccc
Confidence 47889999999
No 8
>d1sfpa_ b.23.1.1 (A:) Acidic seminal fluid protein (ASFP) {Cow (Bos taurus) [TaxId: 9913]}
Probab=12.06 E-value=1.2e+02 Score=18.37 Aligned_cols=31 Identities=19% Similarity=0.355 Sum_probs=23.4
Q ss_pred ecCCCCCeeeEEEEEEeCccCCCeeeeeeeecC
Q 028969 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMS 35 (201)
Q Consensus 3 VD~~~~~kl~In~DItfp~~PC~~lslDv~D~~ 35 (201)
|....+.++.|.|.= | .+.|..=.|.+.|-.
T Consensus 32 I~~p~g~~I~l~f~~-f-~~~c~~d~v~i~dg~ 62 (111)
T d1sfpa_ 32 IQMPPEYHVRVSIQY-L-QLNCNKESLEIIDGL 62 (111)
T ss_dssp EECCTTCEEEEEEEE-E-ECCTTTEEEEEESSS
T ss_pred EEcCCCceeeEEEee-c-ccccceeeeeecCCc
Confidence 455667788888864 6 899998788887743
No 9
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]}
Probab=11.96 E-value=40 Score=24.47 Aligned_cols=12 Identities=33% Similarity=0.390 Sum_probs=10.2
Q ss_pred CCCeeeeeeeec
Q 028969 23 PCDVLSVDAIDM 34 (201)
Q Consensus 23 PC~~lslDv~D~ 34 (201)
-+.++|+|+||-
T Consensus 27 ~~d~iHiDimDg 38 (220)
T d1h1ya_ 27 GADWLHMDIMDG 38 (220)
T ss_dssp TCSEEEEEEEBS
T ss_pred CCCEEEEeeecC
Confidence 478899999993
No 10
>d1sppb_ b.23.1.1 (B:) Major seminal plasma glycoprotein PSP-II {Pig (Sus scrofa) [TaxId: 9823]}
Probab=10.15 E-value=1.5e+02 Score=18.14 Aligned_cols=31 Identities=19% Similarity=0.314 Sum_probs=22.9
Q ss_pred ecCCCCCeeeEEEEEEeCccCCCeeeeeeeecC
Q 028969 3 VDLKRGETLPIHINMTFPALPCDVLSVDAIDMS 35 (201)
Q Consensus 3 VD~~~~~kl~In~DItfp~~PC~~lslDv~D~~ 35 (201)
|....+.++.|+|.- | ++.|..=.|.|.|-.
T Consensus 34 I~~p~~~~I~l~f~~-f-~~~C~~d~l~I~dg~ 64 (112)
T d1sppb_ 34 ILMKPDQKVRMAIPY-L-NLACGKEYVEVFDGL 64 (112)
T ss_dssp EECCTTCEEEEEEEE-E-ECCBTTEEEEEESSS
T ss_pred EecCCcEEEEEEEEe-h-hcccccceeEEEecc
Confidence 445566778887764 5 889998888888844
Done!