BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028973
(201 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ESY9|GILT_MOUSE Gamma-interferon-inducible lysosomal thiol reductase OS=Mus
musculus GN=Ifi30 PE=1 SV=3
Length = 248
Score = 101 bits (251), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNST--FDCQH 99
V++ LYYESLC F++ L + + ++ I+++ L P+GNA+ R + T F CQH
Sbjct: 59 VRVSLYYESLCGACRYFLVRDLFPTW--LMVMEIMNITLVPYGNAQERNVSGTWEFTCQH 116
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFD--KLELDPKPIV 157
G EC LN VEAC +D E F I C+E + + + C E+ P+ I+
Sbjct: 117 GELECRLNMVEACLLDKL-EKEAAFLTIVCMEEM--DDMEKKLGPCLQVYAPEVSPESIM 173
Query: 158 DCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYE 198
+C T GTQL + A T++L PPH+YVPWV+V+ +PL +
Sbjct: 174 ECATGKRGTQLMHENAQLTDALHPPHEYVPWVLVNEKPLKD 214
>sp|Q499T2|GILT_RAT Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus
norvegicus GN=Ifi30 PE=2 SV=1
Length = 248
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 90/159 (56%), Gaps = 9/159 (5%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNST--FDCQH 99
V + LYYESLC F++ L + + ++ I+++ L P+GNA+ R + T F CQH
Sbjct: 59 VNVSLYYESLCGACRYFLVRNLFPTW--LMVMEIMNITLVPYGNAQERNVSGTWEFTCQH 116
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDKL--ELDPKPIV 157
G EC LN VEAC +D E F I C+E + E + C E+ P+ I+
Sbjct: 117 GELECKLNKVEACLLDKL-EKEAAFLTIVCMEEM--EDMEKKLGPCLQLYVPEVSPESIM 173
Query: 158 DCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPL 196
+C T GT+L + A T++L PPH+YVPWV+V+ +PL
Sbjct: 174 ECATGKRGTELMHENAQLTDALQPPHEYVPWVLVNEKPL 212
>sp|B3SP85|GILT_PIG Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa
GN=IFI30 PE=2 SV=1
Length = 246
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 92/179 (51%), Gaps = 15/179 (8%)
Query: 24 LSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPW 83
L V S P +VN LYYESLC F++ L + + + I+++ L P+
Sbjct: 46 LQRPVGKSDPPPVNVN------LYYESLCNGCRYFLVRELFPTW--LMVWEILNVTLVPY 97
Query: 84 GNAKIR--ANNSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQ 141
GNA+ R + F CQHG EC +N VEAC +D E N F I CIE L +
Sbjct: 98 GNAQERNVSGRWEFTCQHGEQECKMNKVEACLLDKL-EKNMAFLTIVCIEEL--DDMEKN 154
Query: 142 WETCFD--KLELDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPLYE 198
E C ++ P I++C G QL A T++L PPH+YVPWVVV+G+P+ E
Sbjct: 155 LEPCLQIYAPKVSPDSIMECAMGDRGMQLLHINAQLTDALKPPHEYVPWVVVNGKPMTE 213
>sp|A6QPN6|GILT_BOVIN Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus
GN=IFI30 PE=2 SV=1
Length = 244
Score = 97.8 bits (242), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 87/168 (51%), Gaps = 31/168 (18%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIR--ANNSTFDCQH 99
V + LYYE+LCP F+I L + + +L I+++ L P+GNA+ R + F CQH
Sbjct: 56 VNVSLYYEALCPGCREFLIRELFPTW--LMVLEILNVTLVPYGNAQERNVSGKWEFTCQH 113
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYSQWETCFDKLELDPKP---- 155
G ECLLN VEAC +D E F I C+E + D +E + KP
Sbjct: 114 GERECLLNKVEACLLDQL-EQKIAFLTIVCLEEM-------------DDMEQNLKPCLQI 159
Query: 156 ---------IVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQ 194
I++C T G QL A T++L PPH+YVPWVVV+G+
Sbjct: 160 YAPKVSADSIMECATGNRGMQLLHINAQLTDALRPPHKYVPWVVVNGE 207
>sp|P13284|GILT_HUMAN Gamma-interferon-inducible lysosomal thiol reductase OS=Homo
sapiens GN=IFI30 PE=1 SV=3
Length = 250
Score = 94.4 bits (233), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 13/161 (8%)
Query: 42 VKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIR--ANNSTFDCQH 99
V + LYYE+LC F+I L + + ++ I+++ L P+GNA+ + + F CQH
Sbjct: 62 VNVTLYYEALCGGCRAFLIRELFPTW--LLVMEILNVTLVPYGNAQEQNVSGRWEFKCQH 119
Query: 100 GPSECLLNTVEACAIDSWPELNKHFPF--IYCIESLVYEHKYSQWETCFD--KLELDPKP 155
G EC N VEAC +D EL+ F I C+E +E C L P
Sbjct: 120 GEEECKFNKVEACVLD---ELDMELAFLTIVCMEE--FEDMERSLPLCLQLYAPGLSPDT 174
Query: 156 IVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDGQPL 196
I++C G QL A T++L PPH+YVPWV V+G+PL
Sbjct: 175 IMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPL 215
>sp|O17861|YVRI_CAEEL GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1
SV=1
Length = 277
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 9/164 (5%)
Query: 39 NSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANNSTFDCQ 98
N K+ + + E+LCP NF+ L I + + V++ L P+GNAK+ + T CQ
Sbjct: 73 NQKINITVLIEALCPDCQNFLTKQLYPIVFK-NFANYVNIELVPFGNAKV-LEDGTIKCQ 130
Query: 99 HGPSECLLNTVEACAIDSWPELNKHFPFIYCI-ESLVYEHKYSQW-ETCFDKLELD---P 153
HG EC +N E C IDS + P + CI ESL + +++ + CF+KL++
Sbjct: 131 HGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIGGDIQ 189
Query: 154 KPIVDCYTSGYGTQLELKYAAETNSLVP-PHQYVPWVVVDGQPL 196
+ C S G L+ K AA T ++ P H++VPWV+++G L
Sbjct: 190 RLTQSCLVSKLGADLQNKAAAATANVWPEQHKFVPWVIINGVSL 233
>sp|P34276|YKJ2_CAEEL GILT-like protein C02D5.2 OS=Caenorhabditis elegans GN=C02D5.2 PE=3
SV=1
Length = 323
Score = 83.6 bits (205), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 10/176 (5%)
Query: 23 FLSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSP 82
F+ A T V + VKL +Y E+ CP ++ F L K ++ + L+ ++L++ P
Sbjct: 120 FIEYEPKAGPTIKEPVENIVKLDVYMEAQCPDTSRFFRQQLKKAWDILGRLNRIELNVIP 179
Query: 83 WGNAKIRANNSTFD--CQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYEHKYS 140
+G A+ + F+ CQHGP+EC +N + C ID + +++ P + C++ KYS
Sbjct: 180 FGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCMQG-----KYS 234
Query: 141 QWETCFDKLELDP---KPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVVVDG 193
E E P + + +C + G +L +T SL P ++PW+V++G
Sbjct: 235 LDEAMKCVTENYPSEYERMRECASGTRGRRLLALSGQKTASLTPAIDFIPWIVING 290
>sp|Q61Z40|YO30_CAEBR GILT-like protein CBG03282 OS=Caenorhabditis briggsae GN=CBG03282
PE=3 SV=1
Length = 220
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 14 LVFYITLFCFLSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLL 73
V+Y LF + + +S+ + + KV + + E C ++ ++ + + ++ +
Sbjct: 8 FVYYSFLFILV---LCSSKDTEVNNGEKVNIVAFGEGRCSDTSFWMKWHWLPMWRMLGST 64
Query: 74 SIVDLHLSPWGNAKIRANNSTFD-----CQHGPSECLLNTVEACAIDSWPELNKHFPFIY 128
++ P+G ++ + D C HG ECLLN ++AC I++ P ++ +
Sbjct: 65 GRINFEYHPYGIKTTCVDSDSGDDVVCECHHGARECLLNQLQACVIEALPNFEEYMEVVT 124
Query: 129 CIESLVYEHKYSQWETCFDK-LELDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVP 187
CI+ ++ E CF++ +L+ ++ C S +G +L + + P + P
Sbjct: 125 CIQG--KQNISMAAEACFNEPSKLERAKMMSCADSRHGRKLFSDHENFVAQMAPEMDWAP 182
Query: 188 WVVVDGQPLYEV 199
W++++G+ E
Sbjct: 183 WILINGKRYKEA 194
>sp|Q23570|YO30_CAEEL GILT-like protein ZK669.3 OS=Caenorhabditis elegans GN=ZK669.3 PE=1
SV=1
Length = 218
Score = 60.5 bits (145), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 11/196 (5%)
Query: 10 KALSLVFYITLFCFLSGSVSASRTSPSDVNSKVKLGLYYESLCPYSANFIINYLVKIFED 69
+ L+ VF + S + + + D+ + V G E C ++ ++ + + ++
Sbjct: 2 RRLNGVFICLILFITKISYAKDKGANGDMVNIVAFG---EGRCSDTSYWMKWHWLPMWRM 58
Query: 70 VDLLSIVDLHLSPWGNAKI-----RANNSTFDCQHGPSECLLNTVEACAIDSWPELNKHF 124
+ ++ P+G A++ DC HG ECLLN ++AC I++ P +
Sbjct: 59 LGSTGRINFDYHPYGIKTTCVDSESADDVVCDCHHGNRECLLNQLQACVIEALPNFEDYM 118
Query: 125 PFIYCIESLVYEHKYSQWETCFDK-LELDPKPIVDCYTSGYGTQLELKYAAETNSLVPPH 183
+ CI+ ++ E CF+ +LD +++C S +G +L + P
Sbjct: 119 EVVTCIQG--KQNISMAAEVCFEGPTKLDRTKMMECAESRHGRKLFSDQENIVAQMAPEM 176
Query: 184 QYVPWVVVDGQPLYEV 199
+ PW++++G E
Sbjct: 177 DWAPWILINGTRYKEA 192
>sp|Q8L7Q7|PME64_ARATH Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis
thaliana GN=PME64 PE=2 SV=2
Length = 602
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 97 CQHGPSECLLNTVEACAIDSWPELNKHFPFIYCIESLVYE 136
C++G +C TV+ A+DS P+ N+ F+ I VYE
Sbjct: 292 CKNGGKDCKYKTVQE-AVDSAPDTNRTVKFVIRIREGVYE 330
>sp|Q9Y7K5|YGI3_SCHPO Uncharacterized WD repeat-containing protein C2A9.03
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC2A9.03 PE=4 SV=2
Length = 426
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 17/92 (18%)
Query: 53 PYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKI---------RANNSTFDCQHG--- 100
P ++NF +N + D VD PWGN I R + + C H
Sbjct: 47 PTASNFELNP-----KSTDNCGTVDFQGIPWGNKAIGKRKNFRLYRLHTYSLSCNHSDWS 101
Query: 101 PSECLLNTVEACAIDSWPELNKHFPFIYCIES 132
P E L+TV+ A DS+ E + C+ +
Sbjct: 102 PEELSLDTVQVAAEDSFYEFQRFLKNPNCLRN 133
>sp|Q8NJP6|AXE1_PENPU Acetylxylan esterase A OS=Penicillium purpurogenum GN=axeA PE=1
SV=1
Length = 382
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Query: 10 KALSLVFYITLFCFLSGSVSASRTSPSDVNSKVKLG 45
K+LS F +TLF +L+ +S++RT DVN +V G
Sbjct: 2 KSLSFSFLVTLFLYLT--LSSARTLGKDVNKRVTAG 35
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,204,842
Number of Sequences: 539616
Number of extensions: 3095613
Number of successful extensions: 5413
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5385
Number of HSP's gapped (non-prelim): 13
length of query: 201
length of database: 191,569,459
effective HSP length: 112
effective length of query: 89
effective length of database: 131,132,467
effective search space: 11670789563
effective search space used: 11670789563
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)