Your job contains 1 sequence.
>028976
MQKQNIFYKGALFGGRNADGKFSSKVPCMVTSLHRDRTCAKSFCMRTRNRIPFESKSTGL
ASLKSNHNLRHGKVKGLIDATQGESDEDDDLCPVECVREFKTDAEFFKILEKSKETGSLV
VVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLKIKVNF
SFVLFLTFNEFILMASVIYIT
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028976
(201 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q0D840 - symbol:TRXH "Thioredoxin H1" species:3... 105 9.6e-06 1
TAIR|locus:2120860 - symbol:ACHT1 "atypical CYS HIS rich... 118 1.7e-05 1
SGD|S000004033 - symbol:TRX1 "Cytoplasmic thioredoxin iso... 98 6.2e-05 1
UNIPROTKB|P08629 - symbol:TXN "Thioredoxin" species:9031 ... 93 0.00023 1
TAIR|locus:2159971 - symbol:TRX3 "thioredoxin 3" species:... 92 0.00030 1
FB|FBgn0011761 - symbol:dhd "deadhead" species:7227 "Dros... 91 0.00039 1
UNIPROTKB|P29451 - symbol:TXN "Thioredoxin" species:9544 ... 91 0.00039 1
TAIR|locus:2080963 - symbol:TRX1 "thioredoxin H-type 1" s... 91 0.00039 1
UNIPROTKB|O97508 - symbol:TXN "Thioredoxin" species:9796 ... 89 0.00066 1
UNIPROTKB|P10599 - symbol:TXN "Thioredoxin" species:9606 ... 88 0.00085 1
UNIPROTKB|Q5R9M3 - symbol:TXN "Thioredoxin" species:9601 ... 88 0.00085 1
MGI|MGI:98874 - symbol:Txn1 "thioredoxin 1" species:10090... 88 0.00085 1
RGD|621157 - symbol:Txn1 "thioredoxin 1" species:10116 "R... 88 0.00085 1
>UNIPROTKB|Q0D840 [details] [associations]
symbol:TRXH "Thioredoxin H1" species:39947 "Oryza sativa
Japonica Group" [GO:0004857 "enzyme inhibitor activity"
evidence=IDA] [GO:0006979 "response to oxidative stress"
evidence=IEP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0010497 "plasmodesmata-mediated intercellular transport"
evidence=IDA] [GO:0016671 "oxidoreductase activity, acting on a
sulfur group of donors, disulfide as acceptor" evidence=IDA;TAS]
[GO:0043086 "negative regulation of catalytic activity"
evidence=IDA] InterPro:IPR005746 InterPro:IPR013766
InterPro:IPR017937 Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421
PROSITE:PS00194 GO:GO:0005737 GO:GO:0006979 GO:GO:0009055
GO:GO:0009409 GO:GO:0004857 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0022900 GO:GO:0045454 PROSITE:PS51352
GO:GO:0015035 EMBL:AP008213 EMBL:CM000144 KO:K03671 GO:GO:0006662
PANTHER:PTHR10438 GO:GO:0016671 eggNOG:COG0526 GO:GO:0010497
EMBL:D26547 EMBL:D21836 EMBL:AP004384 EMBL:AP003753 EMBL:AK059196
EMBL:AK121423 PIR:T04090 RefSeq:NP_001059069.1 UniGene:Os.39054
PDB:1WMJ PDBsum:1WMJ ProteinModelPortal:Q0D840 SMR:Q0D840
STRING:Q0D840 EnsemblPlants:LOC_Os07g08840.1 GeneID:4342593
KEGG:osa:4342593 Gramene:Q0D840 OMA:ECEDIAA ProtClustDB:CLSN2696590
EvolutionaryTrace:Q0D840 Uniprot:Q0D840
Length = 122
Score = 105 (42.0 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 105 EFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAP-VIFLKHNVIDE 163
EF + K+KE G +V++DF + CG C++I F++ K + P +FLK +V
Sbjct: 16 EFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAK-----KFPGAVFLKVDV--- 67
Query: 164 YDEQSEVAERLKIKVNFSFVLFL 186
DE EVAE+ ++ +F LF+
Sbjct: 68 -DELKEVAEKYNVEAMPTF-LFI 88
>TAIR|locus:2120860 [details] [associations]
symbol:ACHT1 "atypical CYS HIS rich thioredoxin 1"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0016671 "oxidoreductase activity, acting on a sulfur group of
donors, disulfide as acceptor" evidence=IDA] [GO:0009534
"chloroplast thylakoid" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010109 "regulation of photosynthesis"
evidence=IMP] [GO:0051776 "detection of redox state" evidence=IMP]
InterPro:IPR005746 InterPro:IPR013766 InterPro:IPR017937
Pfam:PF00085 PROSITE:PS00194 GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL161564 GO:GO:0009055
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 EMBL:AL049483
GO:GO:0022900 GO:GO:0045454 PROSITE:PS51352 GO:GO:0015035
GO:GO:0006662 PANTHER:PTHR10438 GO:GO:0016671 eggNOG:COG0526
GO:GO:0051776 GO:GO:0010109 EMBL:BT024608 EMBL:AY085376
EMBL:AF144388 IPI:IPI00517325 PIR:T04271 RefSeq:NP_194346.1
UniGene:At.21166 ProteinModelPortal:Q8LEK4 SMR:Q8LEK4 PaxDb:Q8LEK4
PRIDE:Q8LEK4 EnsemblPlants:AT4G26160.1 GeneID:828722
KEGG:ath:AT4G26160 GeneFarm:2483 TAIR:At4g26160
HOGENOM:HOG000241250 InParanoid:Q8LEK4 OMA:NMIDITS PhylomeDB:Q8LEK4
ProtClustDB:CLSN2916096 Genevestigator:Q8LEK4 GermOnline:AT4G26160
Uniprot:Q8LEK4
Length = 221
Score = 118 (46.6 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 34/79 (43%), Positives = 46/79 (58%)
Query: 102 TDAEFFKILEKSKETGS-LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAP-VIFLKHN 159
T AE F L K+ G LV+VDFY T CGSC+ + F KLCK + +E P ++FLK N
Sbjct: 99 TSAEQF--LNALKDAGDRLVIVDFYGTWCGSCRAM---FPKLCKTA--KEHPNILFLKVN 151
Query: 160 VIDEYDEQSEVAERLKIKV 178
+DE + + L +KV
Sbjct: 152 ----FDENKSLCKSLNVKV 166
>SGD|S000004033 [details] [associations]
symbol:TRX1 "Cytoplasmic thioredoxin isoenzyme" species:4932
"Saccharomyces cerevisiae" [GO:0000324 "fungal-type vacuole"
evidence=IPI] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IDA] [GO:0005758 "mitochondrial intermembrane space"
evidence=IDA] [GO:0006662 "glycerol ether metabolic process"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0015035 "protein disulfide oxidoreductase activity"
evidence=IEA] [GO:0015036 "disulfide oxidoreductase activity"
evidence=ISS;IDA] [GO:0080058 "protein deglutathionylation"
evidence=IGI;IDA] [GO:0045454 "cell redox homeostasis"
evidence=IEA;TAS] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0009263
"deoxyribonucleotide biosynthetic process" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=IDA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IDA] [GO:0000011 "vacuole
inheritance" evidence=IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034599 "cellular response to oxidative stress" evidence=ISS]
InterPro:IPR005746 InterPro:IPR013766 InterPro:IPR017937
Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421 PROSITE:PS00194
SGD:S000004033 GO:GO:0005829 GO:GO:0005634 GO:GO:0000139
GO:GO:0006275 GO:GO:0005758 GO:GO:0009055 GO:GO:0015031
GO:GO:0034599 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
EMBL:BK006945 GO:GO:0022900 GO:GO:0000011 GO:GO:0006888
GO:GO:0045454 PROSITE:PS51352 GO:GO:0015036 GO:GO:0015035
GO:GO:0000324 GO:GO:0006890 KO:K03671 GO:GO:0042144 GO:GO:0006662
PANTHER:PTHR10438 eggNOG:COG0526 HOGENOM:HOG000292977 GO:GO:0009263
GO:GO:0080058 GeneTree:ENSGT00530000063008 TIGRFAMs:TIGR01068
OrthoDB:EOG4M0JB8 EMBL:M59169 EMBL:M62647 EMBL:Z73215 EMBL:AY558203
PIR:S15048 RefSeq:NP_013144.1 PDB:2I9H PDB:3F3Q PDB:3F3R
PDBsum:2I9H PDBsum:3F3Q PDBsum:3F3R ProteinModelPortal:P22217
SMR:P22217 IntAct:P22217 MINT:MINT-2786449 STRING:P22217
PaxDb:P22217 PeptideAtlas:P22217 EnsemblFungi:YLR043C GeneID:850732
KEGG:sce:YLR043C OMA:LIEWINN EvolutionaryTrace:P22217
NextBio:966828 Genevestigator:P22217 GermOnline:YLR043C
Uniprot:P22217
Length = 103
Score = 98 (39.6 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 31/89 (34%), Positives = 44/89 (49%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFL 156
V +FKT +EF + + K LVVVDFY T CG CK I K +Q F
Sbjct: 2 VTQFKTASEFDSAIAQDK----LVVVDFYATWCGPCKMIAPMIEKF----SEQYPQADFY 53
Query: 157 KHNVIDEYDEQSEVAERLKIKVNFSFVLF 185
K +V DE +VA++ ++ + +LF
Sbjct: 54 KLDV----DELGDVAQKNEVSAMPTLLLF 78
>UNIPROTKB|P08629 [details] [associations]
symbol:TXN "Thioredoxin" species:9031 "Gallus gallus"
[GO:0006662 "glycerol ether metabolic process" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0015035
"protein disulfide oxidoreductase activity" evidence=IEA]
[GO:0045454 "cell redox homeostasis" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009314
"response to radiation" evidence=ISS] [GO:0033158 "regulation of
protein import into nucleus, translocation" evidence=ISS]
[GO:0043388 "positive regulation of DNA binding" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
InterPro:IPR005746 InterPro:IPR013766 InterPro:IPR017937
Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421 PROSITE:PS00194
GO:GO:0005634 GO:GO:0005737 GO:GO:0005576 GO:GO:0006355
GO:GO:0009055 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
GO:GO:0006351 GO:GO:0022900 GO:GO:0055114 GO:GO:0045454
PROSITE:PS51352 GO:GO:0015035 GO:GO:0009314 GO:GO:0043388 KO:K03671
GO:GO:0033158 GO:GO:0006662 PANTHER:PTHR10438 eggNOG:COG0526
HOGENOM:HOG000292977 GeneTree:ENSGT00530000063008
HOVERGEN:HBG009243 CTD:7295 OrthoDB:EOG47PX7J EMBL:J03882
IPI:IPI00601777 PIR:A30006 RefSeq:NP_990784.1 UniGene:Gga.8723
ProteinModelPortal:P08629 SMR:P08629 STRING:P08629 PRIDE:P08629
Ensembl:ENSGALT00000025326 GeneID:396437 KEGG:gga:396437
InParanoid:P08629 OMA:QFYKNGK NextBio:20816478 Uniprot:P08629
Length = 105
Score = 93 (37.8 bits), Expect = 0.00023, P = 0.00023
Identities = 29/82 (35%), Positives = 42/82 (51%)
Query: 104 AEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNVIDE 163
A+F L+ + E LVVVDF T CG CK I+ F LC GD V+F++ +V
Sbjct: 9 ADFEAELKAAGE--KLVVVDFSATWCGPCKMIKPFFHSLCDKFGD----VVFIEIDV--- 59
Query: 164 YDEQSEVAERLKIKVNFSFVLF 185
D+ +VA +K +F +
Sbjct: 60 -DDAQDVATHCDVKCMPTFQFY 80
>TAIR|locus:2159971 [details] [associations]
symbol:TRX3 "thioredoxin 3" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0006662
"glycerol ether metabolic process" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0015035 "protein
disulfide oxidoreductase activity" evidence=IEA] [GO:0045454 "cell
redox homeostasis" evidence=IEA] [GO:0042542 "response to hydrogen
peroxide" evidence=IGI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0009570 "chloroplast stroma" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0010188 "response
to microbial phytotoxin" evidence=IMP] [GO:0050832 "defense
response to fungus" evidence=IMP] [GO:0016020 "membrane"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA;TAS] [GO:0006457 "protein folding"
evidence=IDA] [GO:0009408 "response to heat" evidence=IMP]
[GO:0010286 "heat acclimation" evidence=IMP] [GO:0016671
"oxidoreductase activity, acting on a sulfur group of donors,
disulfide as acceptor" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0009734 "auxin mediated signaling pathway" evidence=RCA]
InterPro:IPR005746 InterPro:IPR013766 InterPro:IPR017937
Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421 PROSITE:PS00194
GO:GO:0051259 GO:GO:0005829 GO:GO:0005739 GO:GO:0005886
GO:GO:0009506 GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005618 GO:GO:0005773 GO:GO:0009570 GO:GO:0006457
GO:GO:0050832 GO:GO:0009055 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0022900 GO:GO:0042542 GO:GO:0045454
PROSITE:PS51352 GO:GO:0015035 EMBL:AB008264 KO:K03671 GO:GO:0010286
GO:GO:0006662 PANTHER:PTHR10438 GO:GO:0016671 eggNOG:COG0526
HOGENOM:HOG000292977 GO:GO:0010188 EMBL:Z35474 EMBL:U35640
EMBL:AY059870 EMBL:AY065098 EMBL:AY093318 EMBL:AY114566
EMBL:AY085117 EMBL:Z35335 IPI:IPI00523104 PIR:S58118
RefSeq:NP_199112.1 UniGene:At.24175 ProteinModelPortal:Q42403
SMR:Q42403 IntAct:Q42403 STRING:Q42403 PaxDb:Q42403 PRIDE:Q42403
EnsemblPlants:AT5G42980.1 GeneID:834313 KEGG:ath:AT5G42980
TAIR:At5g42980 InParanoid:Q42403 OMA:GTATFIQ PhylomeDB:Q42403
ProtClustDB:CLSN2679888 Genevestigator:Q42403 GermOnline:AT5G42980
Uniprot:Q42403
Length = 118
Score = 92 (37.4 bits), Expect = 0.00030, P = 0.00030
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNVIDEYDEQSE 169
L+ + E+ L+V+DF T C C++I F+ L K D V+F K +V DE +
Sbjct: 20 LKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLD----VVFFKVDV----DELNT 71
Query: 170 VAERLKIKVNFSFV 183
VAE K++ +F+
Sbjct: 72 VAEEFKVQAMPTFI 85
>FB|FBgn0011761 [details] [associations]
symbol:dhd "deadhead" species:7227 "Drosophila melanogaster"
[GO:0015036 "disulfide oxidoreductase activity"
evidence=ISS;IDA;NAS] [GO:0009790 "embryo development"
evidence=NAS] [GO:0007143 "female meiosis" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0015035 "protein
disulfide oxidoreductase activity" evidence=IEA] [GO:0045454 "cell
redox homeostasis" evidence=IEA] [GO:0006662 "glycerol ether
metabolic process" evidence=IEA] [GO:0009055 "electron carrier
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR005746 InterPro:IPR013766
InterPro:IPR017937 Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421
PROSITE:PS00194 GO:GO:0005634 GO:GO:0009055 EMBL:AE014298
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0006974
GO:GO:0022900 GO:GO:0045454 PROSITE:PS51352 GO:GO:0015036
GO:GO:0015035 GO:GO:0006662 PANTHER:PTHR10438 eggNOG:COG0526
GeneTree:ENSGT00530000063008 EMBL:L27072 EMBL:AY118929 PIR:S47867
RefSeq:NP_511046.1 UniGene:Dm.2955 ProteinModelPortal:P47938
SMR:P47938 DIP:DIP-21555N IntAct:P47938 MINT:MINT-920392
STRING:P47938 PaxDb:P47938 PRIDE:P47938 EnsemblMetazoa:FBtr0070749
GeneID:31444 KEGG:dme:Dmel_CG4193 UCSC:CG4193-RA CTD:31444
FlyBase:FBgn0011761 InParanoid:P47938 OMA:ARQYASK OrthoDB:EOG4B8GWM
PhylomeDB:P47938 GenomeRNAi:31444 NextBio:773674 Bgee:P47938
GermOnline:CG4193 Uniprot:P47938
Length = 107
Score = 91 (37.1 bits), Expect = 0.00039, P = 0.00039
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 101 KTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNV 160
+T ++ K +E + + L+V+DFY T CG CK +E L + + + LK +V
Sbjct: 5 RTMNDYHKRIEAADD--KLIVLDFYATWCGPCKEMESTVKSLAR---KYSSKAVVLKIDV 59
Query: 161 IDEYDEQSEVAERLKIKVNFSFVLFLTFN 189
D+++E + ER K++ +FV FL N
Sbjct: 60 -DKFEE---LTERYKVRSMPTFV-FLRQN 83
>UNIPROTKB|P29451 [details] [associations]
symbol:TXN "Thioredoxin" species:9544 "Macaca mulatta"
[GO:0009314 "response to radiation" evidence=ISS] [GO:0033158
"regulation of protein import into nucleus, translocation"
evidence=ISS] [GO:0043388 "positive regulation of DNA binding"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=ISS] InterPro:IPR005746 InterPro:IPR013766
InterPro:IPR017937 Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421
PROSITE:PS00194 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0006355 GO:GO:0009055 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0006351 GO:GO:0022900 GO:GO:0055114
GO:GO:0045454 PROSITE:PS51352 GO:GO:0015035 GO:GO:0009314
GO:GO:0043388 GO:GO:0033158 GO:GO:0006662 PANTHER:PTHR10438
eggNOG:COG0526 HOGENOM:HOG000292977 HOVERGEN:HBG009243
OrthoDB:EOG47PX7J EMBL:M84643 PIR:JS0667 UniGene:Mmu.3316
ProteinModelPortal:P29451 SMR:P29451 PRIDE:P29451 InParanoid:P29451
NextBio:19985313 Uniprot:P29451
Length = 105
Score = 91 (37.1 bits), Expect = 0.00039, P = 0.00039
Identities = 29/86 (33%), Positives = 45/86 (52%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFL 156
V++ ++ A F + L+ + + LVVVDF T CG CK I+ F L ++ + V+FL
Sbjct: 2 VKQIESKAAFQEALDDAGD--KLVVVDFSATWCGPCKMIKPFFHSL----SEKYSNVVFL 55
Query: 157 KHNVIDEYDEQSEVAERLKIKVNFSF 182
+ +V D D SE +K F F
Sbjct: 56 EVDVDDCQDVASEC--EVKCMPTFQF 79
>TAIR|locus:2080963 [details] [associations]
symbol:TRX1 "thioredoxin H-type 1" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006662 "glycerol ether metabolic process" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0015035
"protein disulfide oxidoreductase activity" evidence=IEA]
[GO:0045454 "cell redox homeostasis" evidence=IEA] [GO:0008047
"enzyme activator activity" evidence=IDA] [GO:0043085 "positive
regulation of catalytic activity" evidence=IDA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0016671 "oxidoreductase activity, acting on a sulfur group of
donors, disulfide as acceptor" evidence=IDA] InterPro:IPR005746
InterPro:IPR013766 InterPro:IPR017937 Pfam:PF00085
PIRSF:PIRSF000077 PRINTS:PR00421 PROSITE:PS00194 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009055 GO:GO:0048046
Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0022900
GO:GO:0045454 PROSITE:PS51352 GO:GO:0015035 GO:GO:0008047 KO:K03671
EMBL:AL132980 GO:GO:0006662 PANTHER:PTHR10438 GO:GO:0016671
eggNOG:COG0526 HOGENOM:HOG000292977 EMBL:Z14084 EMBL:U35827
EMBL:AY088687 IPI:IPI00528684 PIR:JQ2242 RefSeq:NP_190672.1
UniGene:At.193 PDB:1XFL PDBsum:1XFL ProteinModelPortal:P29448
SMR:P29448 PaxDb:P29448 PRIDE:P29448 DNASU:824267
EnsemblPlants:AT3G51030.1 GeneID:824267 KEGG:ath:AT3G51030
TAIR:At3g51030 InParanoid:P29448 OMA:ITDFWAT PhylomeDB:P29448
ProtClustDB:CLSN2684588 EvolutionaryTrace:P29448
Genevestigator:P29448 GermOnline:AT3G51030 Uniprot:P29448
Length = 114
Score = 91 (37.1 bits), Expect = 0.00039, P = 0.00039
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 110 LEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAP-VIFLKHNVIDEYDEQS 168
L+K+ E+ +LVVVDF + CG C++I F+ L K + P V+FLK +D DE
Sbjct: 21 LQKANESKTLVVVDFTASWCGPCRFIAPFFADLAK-----KLPNVLFLK---VDT-DELK 71
Query: 169 EVAERLKIKVNFSFVLFL 186
VA I+ +F +FL
Sbjct: 72 SVASDWAIQAMPTF-MFL 88
>UNIPROTKB|O97508 [details] [associations]
symbol:TXN "Thioredoxin" species:9796 "Equus caballus"
[GO:0009314 "response to radiation" evidence=ISS] [GO:0033158
"regulation of protein import into nucleus, translocation"
evidence=ISS] [GO:0043388 "positive regulation of DNA binding"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=ISS] InterPro:IPR005746 InterPro:IPR013766
InterPro:IPR017937 Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421
PROSITE:PS00194 GO:GO:0005829 GO:GO:0005739 GO:GO:0005634
GO:GO:0005576 GO:GO:0009055 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0006351 GO:GO:0022900 GO:GO:0000122
GO:GO:0055114 GO:GO:0045454 PROSITE:PS51352 GO:GO:0015035
GO:GO:0009314 GO:GO:0046826 GO:GO:0043388 KO:K03671 GO:GO:0033158
GO:GO:0006662 PANTHER:PTHR10438 eggNOG:COG0526 HOVERGEN:HBG009243
CTD:7295 OrthoDB:EOG47PX7J GO:GO:0015037 EMBL:AB022431
RefSeq:NP_001075282.1 UniGene:Eca.16874 ProteinModelPortal:O97508
SMR:O97508 STRING:O97508 GeneID:100033827 KEGG:ecb:100033827
InParanoid:O97508 Uniprot:O97508
Length = 105
Score = 89 (36.4 bits), Expect = 0.00066, P = 0.00066
Identities = 28/89 (31%), Positives = 47/89 (52%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFL 156
V++ ++ + F + L + E LVVVDF T CG CK I+ F L ++ + V+FL
Sbjct: 2 VKQIESKSAFQEALNSAGE--KLVVVDFSATWCGPCKMIKPFFHSL----SEKYSNVVFL 55
Query: 157 KHNVIDEYDEQSEVAERLKIKVNFSFVLF 185
+ +V D+ +VA ++K +F F
Sbjct: 56 EVDV----DDCQDVAAECEVKCMPTFQFF 80
>UNIPROTKB|P10599 [details] [associations]
symbol:TXN "Thioredoxin" species:9606 "Homo sapiens"
[GO:0006662 "glycerol ether metabolic process" evidence=IEA]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0015035
"protein disulfide oxidoreductase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0010269 "response to selenium ion" evidence=IEA] [GO:0014823
"response to activity" evidence=IEA] [GO:0015037 "peptide disulfide
oxidoreductase activity" evidence=IEA] [GO:0016999 "antibiotic
metabolic process" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0045454 "cell redox homeostasis" evidence=IEA] [GO:0046826
"negative regulation of protein export from nucleus" evidence=IEA]
[GO:0048678 "response to axon injury" evidence=IEA] [GO:0071333
"cellular response to glucose stimulus" evidence=IEA] [GO:0071455
"cellular response to hyperoxia" evidence=IEA] [GO:0071548
"response to dexamethasone stimulus" evidence=IEA] [GO:0097068
"response to thyroxine stimulus" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0033158 "regulation of protein import into
nucleus, translocation" evidence=IDA] [GO:0043388 "positive
regulation of DNA binding" evidence=IDA] [GO:0009314 "response to
radiation" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0006928 "cellular component movement"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007267 "cell-cell signaling" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0015949
"nucleobase-containing small molecule interconversion"
evidence=TAS] [GO:0035872 "nucleotide-binding domain, leucine rich
repeat containing receptor signaling pathway" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] [GO:0055086
"nucleobase-containing small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR005746
InterPro:IPR013766 InterPro:IPR017937 Pfam:PF00085
PIRSF:PIRSF000077 PRINTS:PR00421 PROSITE:PS00194 GO:GO:0005829
GO:GO:0005739 Reactome:REACT_6900 GO:GO:0005576 GO:GO:0005654
GO:GO:0009055 GO:GO:0008283 GO:GO:0045087 GO:GO:0035872
GO:GO:0007267 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
GO:GO:0006351 GO:GO:0006928 GO:GO:0022900 GO:GO:0000122
EMBL:CH471105 Pathway_Interaction_DB:tnfpathway GO:GO:0055114
GO:GO:0045454 PROSITE:PS51352 GO:GO:0015035
Pathway_Interaction_DB:ptp1bpathway GO:GO:0009314 GO:GO:0015949
PDB:1CQG PDB:1CQH PDBsum:1CQG PDBsum:1CQH
Pathway_Interaction_DB:p38_mkk3_6pathway GO:GO:0046826
GO:GO:0043388 KO:K03671 GO:GO:0033158 GO:GO:0006662
PANTHER:PTHR10438 eggNOG:COG0526 HOGENOM:HOG000292977 PDB:1MDI
PDB:1MDJ PDB:1MDK PDBsum:1MDI PDBsum:1MDJ PDBsum:1MDK EMBL:AL158158
HOVERGEN:HBG009243 CTD:7295 OrthoDB:EOG47PX7J GO:GO:0015037
OMA:DYEGKAI PDB:1M7T PDBsum:1M7T EMBL:J04026 EMBL:X77584
EMBL:X54539 EMBL:X54540 EMBL:X54541 EMBL:AF276919 EMBL:AY004872
EMBL:AF313911 EMBL:AK289508 EMBL:CR407665 EMBL:AF548001
EMBL:BC003377 EMBL:BC054866 EMBL:AF065241 IPI:IPI00216298
IPI:IPI00552768 PIR:JH0568 RefSeq:NP_001231867.1 RefSeq:NP_003320.2
UniGene:Hs.435136 PDB:1AIU PDB:1AUC PDB:1ERT PDB:1ERU PDB:1ERV
PDB:1ERW PDB:1TRS PDB:1TRU PDB:1TRV PDB:1TRW PDB:1W1C PDB:1W1E
PDB:2HSH PDB:2HXK PDB:2IFQ PDB:2IIY PDB:3E3E PDB:3KD0 PDB:3M9J
PDB:3M9K PDB:3QFA PDB:3QFB PDB:3TRX PDB:4TRX PDBsum:1AIU
PDBsum:1AUC PDBsum:1ERT PDBsum:1ERU PDBsum:1ERV PDBsum:1ERW
PDBsum:1TRS PDBsum:1TRU PDBsum:1TRV PDBsum:1TRW PDBsum:1W1C
PDBsum:1W1E PDBsum:2HSH PDBsum:2HXK PDBsum:2IFQ PDBsum:2IIY
PDBsum:3E3E PDBsum:3KD0 PDBsum:3M9J PDBsum:3M9K PDBsum:3QFA
PDBsum:3QFB PDBsum:3TRX PDBsum:4TRX ProteinModelPortal:P10599
SMR:P10599 DIP:DIP-6129N IntAct:P10599 MINT:MINT-1522967
STRING:P10599 Allergome:3543 PhosphoSite:P10599 DMDM:135773
DOSAC-COBS-2DPAGE:P10599 REPRODUCTION-2DPAGE:IPI00216298
SWISS-2DPAGE:P10599 PaxDb:P10599 PeptideAtlas:P10599 PRIDE:P10599
DNASU:7295 Ensembl:ENST00000374515 Ensembl:ENST00000374517
GeneID:7295 KEGG:hsa:7295 UCSC:uc004bep.2 GeneCards:GC09M113006
HGNC:HGNC:12435 HPA:CAB008678 MIM:187700 neXtProt:NX_P10599
PharmGKB:PA37091 InParanoid:P10599 PhylomeDB:P10599 ChiTaRS:TXN
EvolutionaryTrace:P10599 GenomeRNAi:7295 NextBio:28523
ArrayExpress:P10599 Bgee:P10599 CleanEx:HS_TXN
Genevestigator:P10599 GermOnline:ENSG00000136810 Uniprot:P10599
Length = 105
Score = 88 (36.0 bits), Expect = 0.00085, P = 0.00085
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFL 156
V++ ++ F + L+ + + LVVVDF T CG CK I+ F L ++ + VIFL
Sbjct: 2 VKQIESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSL----SEKYSNVIFL 55
Query: 157 KHNVIDEYDEQSEVAERLKIKVNFSF 182
+ +V D D SE +K F F
Sbjct: 56 EVDVDDCQDVASEC--EVKCMPTFQF 79
>UNIPROTKB|Q5R9M3 [details] [associations]
symbol:TXN "Thioredoxin" species:9601 "Pongo abelii"
[GO:0009314 "response to radiation" evidence=ISS] [GO:0033158
"regulation of protein import into nucleus, translocation"
evidence=ISS] [GO:0043388 "positive regulation of DNA binding"
evidence=ISS] [GO:0055114 "oxidation-reduction process"
evidence=ISS] InterPro:IPR005746 InterPro:IPR013766
InterPro:IPR017937 Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421
PROSITE:PS00194 GO:GO:0005634 GO:GO:0005737 GO:GO:0005576
GO:GO:0006355 GO:GO:0009055 Gene3D:3.40.30.10 InterPro:IPR012336
SUPFAM:SSF52833 GO:GO:0006351 GO:GO:0022900 GO:GO:0055114
GO:GO:0045454 PROSITE:PS51352 GO:GO:0015035 GO:GO:0009314
GO:GO:0043388 KO:K03671 GO:GO:0033158 GO:GO:0006662
PANTHER:PTHR10438 HOVERGEN:HBG009243 CTD:7295 EMBL:CR859364
RefSeq:NP_001125903.1 UniGene:Pab.7406 ProteinModelPortal:Q5R9M3
SMR:Q5R9M3 PRIDE:Q5R9M3 GeneID:100172836 KEGG:pon:100172836
InParanoid:Q5R9M3 Uniprot:Q5R9M3
Length = 106
Score = 88 (36.0 bits), Expect = 0.00085, P = 0.00085
Identities = 29/86 (33%), Positives = 44/86 (51%)
Query: 97 VREFKTDAEFFKILEKSKETGSLVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFL 156
V++ ++ F + L+ + + LVVVDF T CG CK I+ F L ++ + VIFL
Sbjct: 2 VKQIESKTAFQEALDAAGD--KLVVVDFSATWCGPCKMIKPFFHSL----SEKYSNVIFL 55
Query: 157 KHNVIDEYDEQSEVAERLKIKVNFSF 182
+ +V D D SE +K F F
Sbjct: 56 EVDVDDCQDVASEC--EVKCMPTFQF 79
>MGI|MGI:98874 [details] [associations]
symbol:Txn1 "thioredoxin 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006662 "glycerol
ether metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0009314 "response to radiation" evidence=ISO] [GO:0015035
"protein disulfide oxidoreductase activity" evidence=IEA]
[GO:0015037 "peptide disulfide oxidoreductase activity"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0030424
"axon" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO]
[GO:0033158 "regulation of protein import into nucleus,
translocation" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043388 "positive regulation of DNA binding"
evidence=ISO] [GO:0045454 "cell redox homeostasis" evidence=IDA]
[GO:0046826 "negative regulation of protein export from nucleus"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=ISO;IDA] InterPro:IPR005746 InterPro:IPR013766
InterPro:IPR017937 Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421
PROSITE:PS00194 MGI:MGI:98874 GO:GO:0005829 GO:GO:0005739
GO:GO:0005634 GO:GO:0005576 GO:GO:0009055 Gene3D:3.40.30.10
InterPro:IPR012336 SUPFAM:SSF52833 GO:GO:0006351 GO:GO:0022900
GO:GO:0000122 Reactome:REACT_107772 GO:GO:0045454 PROSITE:PS51352
GO:GO:0015035 GO:GO:0009314 GO:GO:0046826 GO:GO:0043388 KO:K03671
GO:GO:0033158 GO:GO:0006662 PANTHER:PTHR10438 eggNOG:COG0526
HOGENOM:HOG000292977 GeneTree:ENSGT00530000063008
HOVERGEN:HBG009243 OrthoDB:EOG47PX7J GO:GO:0015037 EMBL:X77585
EMBL:D21859 EMBL:AK007537 EMBL:AK007790 EMBL:BC010756 EMBL:BC094415
IPI:IPI00226993 PIR:JC4068 RefSeq:NP_035790.1 UniGene:Mm.260618
ProteinModelPortal:P10639 SMR:P10639 IntAct:P10639 STRING:P10639
PhosphoSite:P10639 SWISS-2DPAGE:P10639 UCD-2DPAGE:P10639
PaxDb:P10639 PRIDE:P10639 Ensembl:ENSMUST00000030051 GeneID:22166
KEGG:mmu:22166 CTD:22166 InParanoid:P10639 OMA:ITTKESW
NextBio:302106 Bgee:P10639 CleanEx:MM_TXN1 Genevestigator:P10639
GermOnline:ENSMUSG00000028367 Uniprot:P10639
Length = 105
Score = 88 (36.0 bits), Expect = 0.00085, P = 0.00085
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLKIKV 178
LVVVDF T CG CK I+ F LC D+ + V+FL+ +V D D ++ +K
Sbjct: 22 LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFLEVDVDDCQDVAADC--EVKCMP 75
Query: 179 NFSF 182
F F
Sbjct: 76 TFQF 79
>RGD|621157 [details] [associations]
symbol:Txn1 "thioredoxin 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0004791
"thioredoxin-disulfide reductase activity" evidence=TAS]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006662 "glycerol ether metabolic
process" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0009314 "response to radiation" evidence=ISO;ISS]
[GO:0010269 "response to selenium ion" evidence=IEP] [GO:0014823
"response to activity" evidence=IEP] [GO:0015035 "protein disulfide
oxidoreductase activity" evidence=IEA] [GO:0015037 "peptide
disulfide oxidoreductase activity" evidence=IEA;ISO] [GO:0016999
"antibiotic metabolic process" evidence=IEP] [GO:0019899 "enzyme
binding" evidence=IPI] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0030424 "axon" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0033158 "regulation of protein import
into nucleus, translocation" evidence=ISO;ISS] [GO:0035690
"cellular response to drug" evidence=IEP] [GO:0042493 "response to
drug" evidence=IEP] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043388 "positive regulation of DNA binding" evidence=ISO;ISS]
[GO:0045454 "cell redox homeostasis" evidence=IEA;ISO] [GO:0046826
"negative regulation of protein export from nucleus"
evidence=IEA;ISO] [GO:0048678 "response to axon injury"
evidence=IEP] [GO:0055114 "oxidation-reduction process"
evidence=ISO;ISS] [GO:0071333 "cellular response to glucose
stimulus" evidence=IEP] [GO:0071455 "cellular response to
hyperoxia" evidence=IEP] [GO:0071548 "response to dexamethasone
stimulus" evidence=IEP] [GO:0097068 "response to thyroxine
stimulus" evidence=IEP] InterPro:IPR005746 InterPro:IPR013766
InterPro:IPR017937 Pfam:PF00085 PIRSF:PIRSF000077 PRINTS:PR00421
PROSITE:PS00194 RGD:621157 GO:GO:0005829 GO:GO:0005739
GO:GO:0005634 GO:GO:0005576 GO:GO:0071333 GO:GO:0014823
GO:GO:0009055 GO:GO:0030424 GO:GO:0043025 GO:GO:0030425
GO:GO:0048678 Gene3D:3.40.30.10 InterPro:IPR012336 SUPFAM:SSF52833
GO:GO:0006351 GO:GO:0022900 GO:GO:0000122 GO:GO:0035690
GO:GO:0045454 PROSITE:PS51352 GO:GO:0015035 GO:GO:0009314
GO:GO:0010269 GO:GO:0097068 GO:GO:0046826 GO:GO:0043388
GO:GO:0071548 KO:K03671 GO:GO:0071455 GO:GO:0033158 GO:GO:0006662
PANTHER:PTHR10438 eggNOG:COG0526 HOGENOM:HOG000292977 GO:GO:0016999
GO:GO:0004791 GeneTree:ENSGT00530000063008 HOVERGEN:HBG009243
OrthoDB:EOG47PX7J GO:GO:0015037 CTD:22166 OMA:ITTKESW EMBL:X14878
EMBL:AF311055 EMBL:BC058454 IPI:IPI00231368 PIR:S04352
RefSeq:NP_446252.1 UniGene:Rn.29777 ProteinModelPortal:P11232
SMR:P11232 IntAct:P11232 MINT:MINT-4571509 STRING:P11232
PRIDE:P11232 Ensembl:ENSRNOT00000016447 GeneID:116484
KEGG:rno:116484 UCSC:RGD:621157 InParanoid:P11232 NextBio:619063
Genevestigator:P11232 GermOnline:ENSRNOG00000012081 Uniprot:P11232
Length = 105
Score = 88 (36.0 bits), Expect = 0.00085, P = 0.00085
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 119 LVVVDFYRTSCGSCKYIEQGFSKLCKGSGDQEAPVIFLKHNVIDEYDEQSEVAERLKIKV 178
LVVVDF T CG CK I+ F LC D+ + V+FL+ +V D D ++ +K
Sbjct: 22 LVVVDFSATWCGPCKMIKPFFHSLC----DKYSNVVFLEVDVDDCQDVAADC--EVKCMP 75
Query: 179 NFSF 182
F F
Sbjct: 76 TFQF 79
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.401 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 201 201 0.00089 111 3 11 22 0.45 32
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 571 (61 KB)
Total size of DFA: 158 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.25u 0.12s 20.37t Elapsed: 00:00:01
Total cpu time: 20.25u 0.12s 20.37t Elapsed: 00:00:01
Start: Fri May 10 01:02:41 2013 End: Fri May 10 01:02:42 2013