BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028977
(201 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RD5|A Chain A, Crystal Structure Of A Putative Uncharacterized Protein
From Mycobacterium Paratuberculosis
Length = 291
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 1 MATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYP 60
MA P+ L+ D E Q TNH+GHF LTNLLL + R+V VSS H +P
Sbjct: 97 MAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL---------TDRVVTVSSMAH---WP 144
Query: 61 EGIRFDRINDQSG-YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNL 119
I + +N +S Y+ + AY QSKLAN+L TSEL RRL G + A + HPG TNL
Sbjct: 145 GRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNL 204
Query: 120 --FRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALH----PHVKGLTGSYFADSNVAQA 173
L+ + V + + GA T Y A G Y +
Sbjct: 205 QGASGRKLGDALMSAATRVVATDADFGARQTLYAASQDLPGDSFVGPRFGYLGRTQPVGR 264
Query: 174 SSQAVNTELAQKLWDFSSDL 193
S +A + +A LW S L
Sbjct: 265 SRRAKDAGMAAALWALSEQL 284
>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed
With Nadp+
Length = 274
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 67/172 (38%), Gaps = 50/172 (29%)
Query: 13 ELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS----------------RRHQ 56
E+ TN + N LL M GR+VN+SS R H
Sbjct: 105 EMTLKTNFFATRNMCNELLPIM-------KPHGRVVNISSLQCLRAFENCSEDLQERFHS 157
Query: 57 FSYPEGIRFD-----------RINDQSGYNRFSAYGQSKLANVLHTSELARRLKED--GV 103
+ EG D ++++ G+ S YG SKL + + LARRL E
Sbjct: 158 ETLTEGDLVDLMKKFVEDTKNEVHEREGWPN-SPYGVSKLGVTVLSRILARRLDEKRKAD 216
Query: 104 DITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHP 155
I N+ PG + T++ GK I+ VE+GA T Y+AL P
Sbjct: 217 RILVNACCPGPVKTDMD-------------GKDSIRTVEEGAETPVYLALLP 255
>pdb|1WMA|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Hydroxy-pp
pdb|3BHI|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Nadp
pdb|3BHJ|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With Glutathione
pdb|3BHM|A Chain A, Crystal Structure Of Human Carbonyl Reductase 1 In Complex
With S-Hydroxymethylglutathione
Length = 276
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 52/200 (26%)
Query: 2 ATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS----RRHQF 57
TPF + E+ TN G + LL + +GR+VNVSS R +
Sbjct: 99 PTPFHI---QAEVTMKTNFFGTRDVCTELLPLI-------KPQGRVVNVSSIMSVRALKS 148
Query: 58 SYPE---GIRFDRINDQSG---YNRF----------------SAYGQSKLANVLHTSELA 95
PE R + I ++ N+F SAYG +K+ + + A
Sbjct: 149 CSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHA 208
Query: 96 RRLKED--GVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVA- 152
R+L E G I N+ PG + T++ G K+ E+GA T Y+A
Sbjct: 209 RKLSEQRKGDKILLNACCPGWVRTDM-------------AGPKATKSPEEGAETPVYLAL 255
Query: 153 LHPHVKGLTGSYFADSNVAQ 172
L P +G G + ++ V Q
Sbjct: 256 LPPDAEGPHGQFVSEKRVEQ 275
>pdb|2PFG|A Chain A, Crystal Structure Of Human Cbr1 In Complex With Bigf2
Length = 276
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 79/200 (39%), Gaps = 52/200 (26%)
Query: 2 ATPFMLSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSS----RRHQF 57
TPF + E+ TN G + LL + +GR+VNVSS R +
Sbjct: 99 PTPFHI---QAEVTMKTNFFGTRDVXTELLPLI-------KPQGRVVNVSSIMSVRALKS 148
Query: 58 SYPE---GIRFDRINDQSG---YNRF----------------SAYGQSKLANVLHTSELA 95
PE R + I ++ N+F SAYG +K+ + + A
Sbjct: 149 CSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHA 208
Query: 96 RRLKED--GVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVA- 152
R+L E G I N+ PG + T++ G K+ E+GA T Y+A
Sbjct: 209 RKLSEQRKGDKILLNACCPGWVRTDM-------------AGPKATKSPEEGAETPVYLAL 255
Query: 153 LHPHVKGLTGSYFADSNVAQ 172
L P +G G + ++ V Q
Sbjct: 256 LPPDAEGPHGQFVSEKRVEQ 275
>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GKB|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans,
Unliganded Structure
pdb|4GLO|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GLO|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nad
pdb|4GVX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|B Chain B, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|C Chain C, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
pdb|4GVX|D Chain D, Crystal Structure Of A Short Chain Dehydrogenase Homolog
(Target Efi- 505321) From Burkholderia Multivorans, With
Bound Nadp And L-Fucose
Length = 258
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 17/81 (20%)
Query: 42 SKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKED 101
+ G IVN+SS+ +G S Y SK A + T E A L+E
Sbjct: 130 ATRGAIVNISSK---------------TAVTGQGNTSGYCASKGAQLALTREWAVALREH 174
Query: 102 GVDITANSVHPGAITTNLFRN 122
GV + N+V P + T L+RN
Sbjct: 175 GVRV--NAVIPAEVMTPLYRN 193
>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|B Chain B, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|C Chain C, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
pdb|3U5T|D Chain D, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein]
Reductase From Sinorhizobium Meliloti
Length = 267
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 21/88 (23%)
Query: 37 TARESSKE----GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTS 92
T RE+++ GRI+N S+ + +P + Y +K T
Sbjct: 143 TLREAAQRLRVGGRIINXSTSQVGLLHPS---------------YGIYAAAKAGVEAXTH 187
Query: 93 ELARRLKEDGVDITANSVHPGAITTNLF 120
L++ L+ G DIT N+V PG T+LF
Sbjct: 188 VLSKELR--GRDITVNAVAPGPTATDLF 213
>pdb|2IUU|A Chain A, P. Aeruginosa Ftsk Motor Domain, Hexamer
pdb|2IUU|B Chain B, P. Aeruginosa Ftsk Motor Domain, Hexamer
pdb|2IUU|C Chain C, P. Aeruginosa Ftsk Motor Domain, Hexamer
pdb|2IUU|D Chain D, P. Aeruginosa Ftsk Motor Domain, Hexamer
pdb|2IUU|E Chain E, P. Aeruginosa Ftsk Motor Domain, Hexamer
pdb|2IUU|F Chain F, P. Aeruginosa Ftsk Motor Domain, Hexamer
Length = 491
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 71 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN 118
Q Y+ S S+L + +LKE GV+++ +SVHPG + T
Sbjct: 83 QKSYSPESLEAMSRLLEI--------KLKEFGVEVSVDSVHPGPVITR 122
>pdb|2IUT|A Chain A, P. Aeruginosa Ftsk Motor Domain, Dimeric
pdb|2IUT|B Chain B, P. Aeruginosa Ftsk Motor Domain, Dimeric
Length = 574
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 71 QSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN 118
Q Y+ S S+L + +LKE GV+++ +SVHPG + T
Sbjct: 83 QKSYSPESLEAMSRLLEI--------KLKEFGVEVSVDSVHPGPVITR 122
>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|B Chain B, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|C Chain C, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|D Chain D, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|E Chain E, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
pdb|3TZH|F Chain F, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)
Reductase (Fabg)(F187a) From Vibrio Cholerae
Length = 251
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 22/104 (21%)
Query: 18 TNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRF 77
TN F L+ +L M K ++GRI+NV S + G
Sbjct: 116 TNLTSIFRLSKAVLRGMMK-----KRQGRIINVGS---------------VVGTMGNAGQ 155
Query: 78 SAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 121
+ Y +K + T +AR + GV T N+V PGAI T++ +
Sbjct: 156 ANYAAAKAGVIGFTKSMAREVASRGV--TVNTVAPGAIETDMTK 197
>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DML|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942
pdb|4DMM|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|B Chain B, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|C Chain C, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
pdb|4DMM|D Chain D, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From
Synechococcus Elongatus Pcc 7942 In Complex With Nadp
Length = 269
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 25/160 (15%)
Query: 7 LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD 66
+ +D+ + N G FL + + M K + GRI+N++S + P
Sbjct: 125 MKRDDWQSVLDLNLGGVFLCSRAAAKIMLK-----QRSGRIINIASVVGEMGNP------ 173
Query: 67 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNISFF 126
G +SA +K + T +A+ L G IT N+V PG I T++ ++
Sbjct: 174 ------GQANYSA---AKAGVIGLTKTVAKELASRG--ITVNAVAPGFIATDMTSELAAE 222
Query: 127 SGL-VGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYF 165
L V LG+Y + A ++A P +TG
Sbjct: 223 KLLEVIPLGRY--GEAAEVAGVVRFLAADPAAAYITGQVI 260
>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From
Burkholderia Pseudomallei 1710b
Length = 256
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 22/117 (18%)
Query: 7 LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQFSYPEGIRFD 66
+++++ + TN F +T +++ M + GRI+N+SS
Sbjct: 110 MTREDWQAVIDTNLTSLFNVTKQVIDGMVERGW-----GRIINISS-------------- 150
Query: 67 RINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 123
+N Q G + Y +K T LA+ + GV T N+V PG I T++ + I
Sbjct: 151 -VNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGV--TVNTVSPGYIGTDMVKAI 204
>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
pdb|3ICC|B Chain B, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier
Protein) Reductase From Bacillus Anthracis At 1.87 A
Resolution
Length = 255
Score = 30.0 bits (66), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 17/73 (23%)
Query: 46 RIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDI 105
RI+N+SS + S P+ F AY +K A T LA++L G I
Sbjct: 142 RIINISSAATRISLPD---------------FIAYSXTKGAINTXTFTLAKQLGARG--I 184
Query: 106 TANSVHPGAITTN 118
T N++ PG + T+
Sbjct: 185 TVNAILPGFVKTD 197
>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|B Chain B, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|C Chain C, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
pdb|3RIH|D Chain D, Crystal Structure Of A Putative Short Chain Dehydrogenase
Or Reductase From Mycobacterium Abscessus
Length = 293
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 72 SGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNIS--FFSGL 129
+GY +S YG SK A + A L GV T N++ PG I T ++ + SG+
Sbjct: 184 TGYPGWSHYGASKAAQLGFMRTAAIELAPRGV--TVNAILPGNILTEGLVDMGEEYISGM 241
Query: 130 -----VGLLGKYV 137
+G+LG V
Sbjct: 242 ARSIPMGMLGSPV 254
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Query: 40 ESSKEGRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLK 99
E S + R V + R+ + PEGI + G NR Q + A+ H EL L
Sbjct: 8 ECSAQDRAV-LCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEEL--ELN 64
Query: 100 EDGVDITANSVHPGAITTNLF 120
E+ V ++V PGA NLF
Sbjct: 65 ENIV----SAVEPGAF-NNLF 80
>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|B Chain B, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|C Chain C, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|D Chain D, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|E Chain E, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|F Chain F, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|G Chain G, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|H Chain H, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|I Chain I, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
pdb|3M1A|J Chain J, The Crystal Structure Of A Short-Chain Dehydrogenase From
Streptomyces Avermitilis To 2a
Length = 281
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 18/84 (21%)
Query: 45 GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVD 104
G +VN+SS Q S+ FSAY +K A + LA + G+
Sbjct: 131 GSVVNISSFGGQLSF---------------AGFSAYSATKAALEQLSEGLADEVAPFGIK 175
Query: 105 ITANSVHPGAITTNLF-RNISFFS 127
+ V PGA TNLF + ++FS
Sbjct: 176 VLI--VEPGAFRTNLFGKGAAYFS 197
>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase
Family Protein From Francisella Tularensis Subsp.
Tularensis Schu S4
Length = 244
Score = 28.1 bits (61), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 79 AYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFRNI 123
AY SK A T LA L + I N+V PG + T+L+RN+
Sbjct: 139 AYTLSKGAIAQXTKSLALDLAK--YQIRVNTVCPGTVDTDLYRNL 181
>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum
Length = 285
Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 64/147 (43%), Gaps = 29/147 (19%)
Query: 7 LSKDNIELQFATNHIGHFLLTNL-----LLETMGKTARESSKEGRIVNVSSRRHQFSYPE 61
+++DN+ L+ + L TNL + + + K +++ GRI+N+SS
Sbjct: 131 ITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMI-NNRYGRIINISS--------- 180
Query: 62 GIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 121
I +G + Y SK + T LA+ L +IT N++ PG I++++
Sbjct: 181 ------IVGLTGNVGQANYSSSKAGVIGFTKSLAKELASR--NITVNAIAPGFISSDMTD 232
Query: 122 NISFFSGLVGLLGKYVIKNVEQGAATT 148
IS + K +I N+ G T
Sbjct: 233 KIS------EQIKKNIISNIPAGRMGT 253
>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM
SINORHIZOBIUM Meliloti 1021
Length = 271
Score = 27.7 bits (60), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 74 YNRFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTN 118
+ S Y SK A T LAR L G IT N VHPG+ T+
Sbjct: 174 WPGISLYSASKAALAGLTKGLARDLGPRG--ITVNIVHPGSTDTD 216
>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|B Chain B, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|C Chain C, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EW8|D Chain D, Crystal Structure Of The (s)-specific 1-phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|A Chain A, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
pdb|2EWM|B Chain B, Crystal Structure Of The (S)-Specific 1-Phenylethanol
Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1
Length = 249
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 17/73 (23%)
Query: 45 GRIVNVSSRRHQFSYPEGIRFDRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVD 104
GRI+N++S + ++ Y +K AN+ T LA L +DG
Sbjct: 134 GRIINLTSTTYWLKI---------------EAYTHYISTKAANIGFTRALASDLGKDG-- 176
Query: 105 ITANSVHPGAITT 117
IT N++ P + T
Sbjct: 177 ITVNAIAPSLVRT 189
>pdb|1ZFJ|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh; Ec 1.1.1.205)
From Streptococcus Pyogenes
Length = 491
Score = 27.3 bits (59), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 85 LANVLHTSELARRLKEDGVDITANSVHPGAITT 117
+A + T+E AR L + GVD+ + PG+I T
Sbjct: 278 IAGNIATAEGARALYDAGVDVVKVGIGPGSICT 310
>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|B Chain B, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|C Chain C, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
pdb|1HXH|D Chain D, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID
Dehydrogenase
Length = 253
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 76 RFSAYGQSKLANVLHTSELARRLKEDGVDITANSVHPGAITTNLFR 121
+++ Y SK A T A ++ G I NS+HP I T + +
Sbjct: 147 QYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQ 192
>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|B Chain B, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|C Chain C, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|D Chain D, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|E Chain E, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|F Chain F, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|G Chain G, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
pdb|3S55|H Chain H, Crystal Structure Of A Putative Short-Chain
DehydrogenaseREDUCTASE From Mycobacterium Abscessus
Bound To Nad
Length = 281
Score = 26.6 bits (57), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 102 GVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVE 142
G IT N+V PG I T + N F + L K +K+VE
Sbjct: 191 GYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVE 231
>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase
(Apo Form) From Fungus Cochliobolus Lunatus
pdb|3QWF|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|E Chain E, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|F Chain F, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|G Chain G, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWF|H Chain H, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus
pdb|3QWI|A Chain A, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|B Chain B, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|C Chain C, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWI|D Chain D, Crystal Structure Of A 17beta-Hydroxysteroid Dehydrogenase
(Holo Form) From Fungus Cochliobolus Lunatus In Complex
With Nadph And Coumestrol
pdb|3QWH|A Chain A, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|B Chain B, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|C Chain C, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
pdb|3QWH|D Chain D, Crystal Structure Of The 17beta-Hydroxysteroid
Dehydrogenase From Cochliobolus Lunatus In Complex With
Nadph And Kaempferol
Length = 270
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 29/121 (23%)
Query: 7 LSKDNIELQFATNHIGHFLLTNLLLETMGKTARESSKEGRIVNVSSRRHQ-FSYPEGIRF 65
++++ + F+ N G F + + R ++ GRIV SS + FS P
Sbjct: 115 VTEEEFDRVFSLNTRGQFFVAR-------EAYRHLTEGGRIVLTSSNTSKDFSVP----- 162
Query: 66 DRINDQSGYNRFSAYGQSKLANVLHTSELARRLKEDGVD--ITANSVHPGAITTNLFRNI 123
+ S Y SK A R +D D IT N+V PG T++F +
Sbjct: 163 ----------KHSLYSGSKGA----VDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEV 208
Query: 124 S 124
S
Sbjct: 209 S 209
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.131 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,371,058
Number of Sequences: 62578
Number of extensions: 193982
Number of successful extensions: 515
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 506
Number of HSP's gapped (non-prelim): 26
length of query: 201
length of database: 14,973,337
effective HSP length: 94
effective length of query: 107
effective length of database: 9,091,005
effective search space: 972737535
effective search space used: 972737535
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)