Query 028981
Match_columns 201
No_of_seqs 128 out of 197
Neff 3.3
Searched_HMMs 46136
Date Fri Mar 29 05:35:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028981.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028981hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1573 Aldehyde reductase [Ge 100.0 2.1E-75 4.6E-80 491.2 8.9 162 32-199 2-166 (204)
2 PF05153 DUF706: Family of unk 100.0 4E-70 8.6E-75 476.3 5.1 127 65-193 4-130 (253)
3 TIGR03276 Phn-HD phosphonate d 97.7 2E-05 4.3E-10 66.9 2.1 56 102-159 4-60 (179)
4 COG4341 Predicted HD phosphohy 94.9 0.013 2.9E-07 50.4 1.7 52 110-164 17-68 (186)
5 TIGR00488 putative HD superfam 94.7 0.0065 1.4E-07 48.6 -0.8 37 122-158 7-47 (158)
6 smart00471 HDc Metal dependent 92.6 0.016 3.6E-07 40.2 -1.7 39 122-160 3-46 (124)
7 TIGR01596 cas3_HD CRISPR-assoc 91.5 0.031 6.7E-07 43.7 -1.4 34 125-158 2-47 (177)
8 TIGR00277 HDIG uncharacterized 90.5 0.067 1.4E-06 36.0 -0.3 35 125-159 6-44 (80)
9 PF01966 HD: HD domain; Inter 89.7 0.032 7E-07 39.6 -2.5 35 125-159 2-42 (122)
10 cd00077 HDc Metal dependent ph 88.7 0.065 1.4E-06 37.6 -1.5 35 124-158 3-44 (145)
11 TIGR03319 YmdA_YtgF conserved 88.1 0.26 5.6E-06 47.5 1.6 55 103-159 311-369 (514)
12 COG2316 Predicted hydrolase (H 87.3 0.3 6.4E-06 42.8 1.4 55 98-158 28-86 (212)
13 PRK00106 hypothetical protein; 87.2 0.26 5.7E-06 48.1 1.1 55 103-159 332-390 (535)
14 PF08668 HDOD: HDOD domain; I 83.3 0.7 1.5E-05 37.1 1.7 69 92-160 47-136 (196)
15 PRK07152 nadD putative nicotin 79.2 0.46 1E-05 42.7 -0.8 35 124-158 197-235 (342)
16 PRK12703 tRNA 2'-O-methylase; 78.3 1.3 2.8E-05 41.3 1.8 60 94-159 164-227 (339)
17 TIGR00295 conserved hypothetic 76.3 0.91 2E-05 37.0 0.2 36 124-159 14-58 (164)
18 TIGR02621 cas3_GSU0051 CRISPR- 74.8 1.2 2.6E-05 45.9 0.7 37 122-158 674-716 (844)
19 PRK12705 hypothetical protein; 74.1 1.5 3.2E-05 42.8 1.1 54 103-158 305-362 (508)
20 PRK12704 phosphodiesterase; Pr 65.0 3.5 7.6E-05 40.0 1.5 54 103-158 317-374 (520)
21 PRK10885 cca multifunctional t 61.4 1.9 4.1E-05 40.4 -1.0 36 122-158 226-261 (409)
22 COG2206 c-di-GMP phosphodieste 60.6 3.7 8.1E-05 37.1 0.8 43 113-159 142-191 (344)
23 PF13328 HD_4: HD domain; PDB: 59.6 3.4 7.3E-05 32.7 0.3 36 118-154 14-49 (153)
24 PRK03381 PII uridylyl-transfer 59.0 2.8 6E-05 42.2 -0.4 35 123-157 420-457 (774)
25 PRK01759 glnD PII uridylyl-tra 57.4 10 0.00022 38.7 3.3 35 122-156 435-487 (854)
26 TIGR03760 ICE_TraI_Pfluor inte 55.6 3.3 7.1E-05 36.0 -0.4 36 124-159 68-122 (218)
27 PRK05092 PII uridylyl-transfer 54.7 3.4 7.3E-05 42.3 -0.6 33 125-157 495-545 (931)
28 PF15608 PELOTA_1: PELOTA RNA 54.1 43 0.00093 26.5 5.6 55 76-134 16-78 (100)
29 PRK05007 PII uridylyl-transfer 50.8 5.4 0.00012 40.8 0.2 35 122-156 460-512 (884)
30 PRK00275 glnD PII uridylyl-tra 48.8 4.7 0.0001 41.4 -0.6 36 122-157 459-512 (895)
31 COG1418 Predicted HD superfami 45.9 9.3 0.0002 33.1 0.8 37 124-160 37-77 (222)
32 PRK04374 PII uridylyl-transfer 45.0 7.9 0.00017 39.8 0.3 36 122-157 448-501 (869)
33 PRK08071 L-aspartate oxidase; 44.6 34 0.00075 32.4 4.4 73 85-158 415-508 (510)
34 PRK13480 3'-5' exoribonuclease 43.7 6.6 0.00014 35.9 -0.4 33 128-160 167-201 (314)
35 PTZ00100 DnaJ chaperone protei 43.5 78 0.0017 25.5 5.7 52 83-141 41-96 (116)
36 TIGR00691 spoT_relA (p)ppGpp s 43.2 13 0.00028 37.2 1.5 34 120-154 16-49 (683)
37 PF05964 FYRN: F/Y-rich N-term 43.0 11 0.00024 26.0 0.7 26 150-180 5-30 (54)
38 PRK03059 PII uridylyl-transfer 42.1 8.4 0.00018 39.4 -0.0 36 122-157 439-492 (856)
39 PRK14068 exodeoxyribonuclease 41.0 35 0.00076 25.5 3.2 42 97-138 3-45 (76)
40 PF06784 UPF0240: Uncharacteri 40.8 16 0.00034 31.1 1.4 34 95-139 113-146 (179)
41 PRK11092 bifunctional (p)ppGpp 40.6 26 0.00056 35.5 3.1 53 102-155 23-75 (702)
42 PRK00227 glnD PII uridylyl-tra 40.5 8.2 0.00018 39.0 -0.4 37 122-158 379-418 (693)
43 PRK07094 biotin synthase; Prov 39.6 63 0.0014 28.3 5.0 44 100-152 1-44 (323)
44 PRK14064 exodeoxyribonuclease 39.3 43 0.00094 24.9 3.4 42 97-138 3-45 (75)
45 KOG4481 Uncharacterized conser 38.5 29 0.00062 30.5 2.7 34 95-139 112-145 (194)
46 PF12477 TraW_N: Sex factor F 37.7 12 0.00026 23.9 0.2 12 168-179 20-31 (31)
47 TIGR03401 cyanamide_fam HD dom 37.6 9.5 0.00021 33.3 -0.4 39 120-158 55-98 (228)
48 TIGR01693 UTase_glnD [Protein- 36.9 8.1 0.00018 39.0 -1.0 35 123-157 428-480 (850)
49 TIGR02692 tRNA_CCA_actino tRNA 36.5 15 0.00033 34.6 0.7 38 122-159 257-296 (466)
50 PRK14067 exodeoxyribonuclease 35.3 50 0.0011 24.9 3.2 42 97-138 4-46 (80)
51 COG3481 Predicted HD-superfami 34.0 19 0.00041 33.2 0.9 49 127-177 148-199 (287)
52 PF04752 ChaC: ChaC-like prote 32.5 88 0.0019 26.5 4.6 38 98-140 124-161 (178)
53 PF07514 TraI_2: Putative heli 30.5 11 0.00025 34.4 -1.1 60 123-183 66-147 (327)
54 PF14475 Mso1_Sec1_bdg: Sec1-b 30.5 89 0.0019 21.3 3.5 33 113-145 9-41 (41)
55 PF10809 DUF2732: Protein of u 30.5 1.8E+02 0.004 22.0 5.5 62 50-111 3-64 (77)
56 TIGR01616 nitro_assoc nitrogen 29.8 88 0.0019 24.9 4.0 54 55-111 29-84 (126)
57 COG1099 Predicted metal-depend 29.8 58 0.0013 29.8 3.2 60 79-139 167-233 (254)
58 COG0132 BioD Dethiobiotin synt 29.3 60 0.0013 28.6 3.2 35 112-151 132-171 (223)
59 PRK10119 putative hydrolase; P 29.0 34 0.00073 30.2 1.6 45 112-156 17-62 (231)
60 COG1078 HD superfamily phospho 28.2 13 0.00027 35.5 -1.2 16 145-160 86-101 (421)
61 COG0502 BioB Biotin synthase a 27.6 1.4E+02 0.0031 28.1 5.5 44 98-152 12-55 (335)
62 PRK13298 tRNA CCA-pyrophosphor 27.5 35 0.00076 32.7 1.6 36 123-159 228-263 (417)
63 PF00845 Gemini_BL1: Geminivir 27.0 21 0.00045 32.9 -0.0 17 175-196 80-96 (276)
64 COG3437 Response regulator con 25.9 1E+02 0.0022 29.5 4.3 52 103-158 169-227 (360)
65 PRK00977 exodeoxyribonuclease 25.1 1E+02 0.0022 23.0 3.4 42 96-137 6-48 (80)
66 COG1639 Predicted signal trans 25.1 16 0.00035 33.5 -1.1 76 86-161 63-159 (289)
67 PRK09240 thiH thiamine biosynt 24.2 1.5E+02 0.0032 27.3 4.9 46 98-152 34-79 (371)
68 cd03381 PAP2_glucose_6_phospha 24.0 21 0.00045 31.5 -0.6 32 129-160 190-226 (235)
69 PF11884 DUF3404: Domain of un 23.9 31 0.00067 31.5 0.5 81 64-158 11-117 (262)
70 cd03035 ArsC_Yffb Arsenate Red 23.5 1E+02 0.0022 23.4 3.2 53 55-110 27-82 (105)
71 cd01282 HTH_MerR-like_sg3 Heli 23.4 3.4E+02 0.0073 20.7 6.1 64 42-129 23-86 (112)
72 KOG2155 Tubulin-tyrosine ligas 22.8 46 0.001 33.4 1.4 23 125-149 368-390 (631)
73 PRK14069 exodeoxyribonuclease 22.5 1.1E+02 0.0024 24.0 3.2 41 98-138 6-47 (95)
74 COG1023 Gnd Predicted 6-phosph 22.4 82 0.0018 29.4 2.9 61 99-172 179-251 (300)
75 TIGR01280 xseB exodeoxyribonuc 22.3 1.1E+02 0.0024 22.1 3.0 36 100-135 1-37 (67)
76 PF03656 Pam16: Pam16; InterP 22.1 30 0.00064 28.2 0.0 16 98-115 53-68 (127)
77 PRK14065 exodeoxyribonuclease 21.6 1E+02 0.0022 24.1 2.8 40 95-134 20-60 (86)
78 PTZ00059 dynein light chain; P 21.4 46 0.001 25.0 0.9 8 132-139 40-47 (90)
79 PF00010 HLH: Helix-loop-helix 21.0 2.2E+02 0.0048 18.7 4.1 38 100-137 14-53 (55)
No 1
>KOG1573 consensus Aldehyde reductase [General function prediction only]
Probab=100.00 E-value=2.1e-75 Score=491.18 Aligned_cols=162 Identities=71% Similarity=1.153 Sum_probs=151.7
Q ss_pred CccccCCCC--CCCCCCCCcCccccccCCccc-hhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCHHHHHHH
Q 028981 32 GFVVPKTMP--NDGFVAPEINSFGKTFRDYNA-ECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCEL 108 (201)
Q Consensus 32 ~~~~~~~~~--~~~f~~p~~~~~~~~FR~Y~~-~~~~~~~V~~fYr~~H~~QTvdFv~~~r~~~~~~~~~~MtI~EAle~ 108 (201)
+++++|.++ ++.|.+|++++++.+||+|++ ++++++||+.|||.||+|||||||++||++|+||++.+|||||||++
T Consensus 2 ~~~~~~d~s~v~e~~~~pe~~a~g~~fRdY~dt~~p~q~rV~~~Y~~qH~~QTvDFVk~mr~~~gkf~~~kM~i~ec~el 81 (204)
T KOG1573|consen 2 RTIMSKDSSVVDEPFVAPEVNADGRQFRDYDDTEDPLQKRVRTTYRTQHTNQTVDFVKKMRAEYGKFDKMKMTIWECCEL 81 (204)
T ss_pred CcccCCCCccccCCCCChhhhcchhhhccccccccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcccchhheeHHHHHHH
Confidence 456677655 567899999999999999965 67899999999999999999999999999999999999999999999
Q ss_pred hhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCceeeeeeeecccceecccCCCCCCCceeecCceeecccCCCCccc
Q 028981 109 LNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVH 188 (201)
Q Consensus 109 Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl~~~~fg~epQWavvGDTfpVGC~f~~siV~ 188 (201)
||++|||||||+|+|||+|||||||+||++||++||||||||||||||||. |+|+||||||||||||||+|++||||
T Consensus 82 l~~~vDESDPDlDepni~Ha~QtAE~iR~~~Pd~dWlHLtaLiHDLGKvl~---f~GepQWAVvGDTfpVGC~~~~s~V~ 158 (204)
T KOG1573|consen 82 LNEVVDESDPDLDEPNIQHALQTAEAIRKDYPDEDWLHLTALIHDLGKVLA---FGGEPQWAVVGDTFPVGCAFDASNVH 158 (204)
T ss_pred HHhhhcccCCCCchHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH---hcCCcceeeecCccccccccccccee
Confidence 999999999999999999999999999999999999999999999999995 48899999999999999999999995
Q ss_pred cccchhhhhhc
Q 028981 189 HKVSIFSFKNN 199 (201)
Q Consensus 189 ~e~~~~tF~~N 199 (201)
..++|++|
T Consensus 159 ---~d~~F~~N 166 (204)
T KOG1573|consen 159 ---HDKYFDGN 166 (204)
T ss_pred ---chhhccCC
Confidence 46788887
No 2
>PF05153 DUF706: Family of unknown function (DUF706) ; InterPro: IPR007828 Inositol oxygenase (1.13.99.1 from EC) is involved in the biosynthesis of UDP-glucuronic acid (UDP-GlcA), providing nucleotide sugars for cell-wall polymers. It may be also involved in plant ascorbate biosynthesis [, ].; GO: 0005506 iron ion binding, 0050113 inositol oxygenase activity, 0019310 inositol catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 2HUO_A 3BXD_A 2IBN_A.
Probab=100.00 E-value=4e-70 Score=476.26 Aligned_cols=127 Identities=70% Similarity=1.113 Sum_probs=100.0
Q ss_pred hhHHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCc
Q 028981 65 RQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDW 144 (201)
Q Consensus 65 ~~~~V~~fYr~~H~~QTvdFv~~~r~~~~~~~~~~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW 144 (201)
+++||++|||+||++||||||++||++|++|+|++|||||||++||+||||||||+|+|||+||||||||||++||+|||
T Consensus 4 ~~~~V~~~Y~~~h~~QTv~fv~~~~~~~~~~~~~~Mti~eA~~~L~~LvDeSDPD~d~~~i~H~lQTAEaiR~d~~~~dW 83 (253)
T PF05153_consen 4 ACDRVKEFYRLQHTNQTVDFVKKMRAKYLKFDHAEMTIWEALELLNTLVDESDPDTDLPQIQHALQTAEAIRRDHPDPDW 83 (253)
T ss_dssp -HHHHHHHHHHHHCC--HHHHHHHHHHHTT--SEEE-HHHHHHHGGG---TT-TT--S-HHHHHHHHHHHHHHHSTT-HH
T ss_pred HhHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCcceeeHHHHHHHHHHhccCccCCCchhHHHHHHHHHHHHHHhCCCcch
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeeeecccceecccCCCCCCCceeecCceeecccCCCCccccccch
Q 028981 145 LHLTALIHDLGKVLTLPKFGGLPQWAVVGDTFPLGCAFDESNVHHKVSI 193 (201)
Q Consensus 145 ~qLtGLIHDLGKvl~~~~fg~epQWavvGDTfpVGC~f~~siV~~e~~~ 193 (201)
||||||||||||||++ |+++|||+||||||||||+|+++|||+|||+
T Consensus 84 ~~LtGLiHDLGKvl~~--~~~e~QW~vvGDTfpVGC~f~~~iv~~e~f~ 130 (253)
T PF05153_consen 84 MQLTGLIHDLGKVLAL--FGGEPQWAVVGDTFPVGCAFSESIVFPEFFK 130 (253)
T ss_dssp HHHHHHHTTGGGHHHH--C-T--GGGTSS---BSSS---TTSTTCCC-T
T ss_pred hhheehhccchhhhhh--hcCCCCceeecCceeEecccCccccChhhHh
Confidence 9999999999999999 9999999999999999999999999876544
No 3
>TIGR03276 Phn-HD phosphonate degradation operons associated HDIG domain protein. This small clade of proteins are found adjacent to other genes implicated in the catabolism of phosphonates. They are members of the TIGR00277 domain family and contain a series of five invariant histidines (the domain in general has only four).
Probab=97.68 E-value=2e-05 Score=66.85 Aligned_cols=56 Identities=29% Similarity=0.357 Sum_probs=42.1
Q ss_pred HHHHHHHhhhccCCCCCC-CCcchHHHHHHHHHHHHhcCCCCCceeeeeeeecccceec
Q 028981 102 IWECCELLNEVVDESDPD-LDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLT 159 (201)
Q Consensus 102 I~EAle~Ln~lvDeSDPD-~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl~ 159 (201)
|.+-..++...... +-+ -.+||++|+||||...++++-+ +=+.+++|+||+|.++.
T Consensus 4 ~~~i~~l~~~~g~~-~y~Ge~Vs~leH~LQ~A~lA~~~Gad-~elvvAALLHDIGhll~ 60 (179)
T TIGR03276 4 LDEIFALFDEHGAR-QYGGEAVSQLEHALQCAQLAEAAGAD-DELIVAAFLHDIGHLLA 60 (179)
T ss_pred HHHHHHHHHhcCcc-ccCCCCCcHHHHHHHHHHHHHHcCCC-HHHHHHHHHHhcchhhh
Confidence 44445555554444 343 4599999999999999999854 44599999999999874
No 4
>COG4341 Predicted HD phosphohydrolase [General function prediction only]
Probab=94.92 E-value=0.013 Score=50.44 Aligned_cols=52 Identities=31% Similarity=0.428 Sum_probs=39.5
Q ss_pred hhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCceeeeeeeecccceecccCCC
Q 028981 110 NEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFG 164 (201)
Q Consensus 110 n~lvDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl~~~~fg 164 (201)
...-|++=----++|++|+||+|-..-++|-+.+ +.-+.|+||||.+.. .||
T Consensus 17 ~~~g~e~y~ge~VTq~eHaLQ~AtlAerdGa~~~-lVaaALLHDiGhl~~--~~g 68 (186)
T COG4341 17 LRHGDEGYSGEPVTQLEHALQCATLAERDGADTA-LVAAALLHDIGHLYA--DYG 68 (186)
T ss_pred HHccccccccCcchhhhhHHHHhHHHHhcCCcHH-HHHHHHHHhHHHHhh--hcC
Confidence 3444555444558999999999999999995444 457899999999984 355
No 5
>TIGR00488 putative HD superfamily hydrolase of NAD metabolism. The function of this protein family is unknown. Members of this family of uncharacterized proteins from the Mycoplasmas are longer at the amino end, fused to a region of nicotinamide nucleotide adenylyltransferase, an NAD salvage biosynthesis enzyme. Members are putative metal-dependent phosphohydrolases for NAD metabolism.
Probab=94.66 E-value=0.0065 Score=48.60 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=28.8
Q ss_pred cchHHHHHHHHHHH----HhcCCCCCceeeeeeeeccccee
Q 028981 122 EPQIQHLLQSAEAI----RKDYPDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 122 lpqi~H~lQTAEaI----R~d~p~pDW~qLtGLIHDLGKvl 158 (201)
..-..|.+.+|... |+-++++++..++||+||+||.+
T Consensus 7 ~~r~~Hsl~Va~~a~~lA~~~~~d~e~a~~AGLLHDIGk~~ 47 (158)
T TIGR00488 7 EHRYQHCLGVGQTAKQLAEANKLDSKKAEIAGAYHDLAKFL 47 (158)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHhccC
Confidence 34678999887654 33356789999999999999964
No 6
>smart00471 HDc Metal dependent phosphohydrolases with conserved 'HD' motif. Includes eukaryotic cyclic nucleotide phosphodiesterases (PDEc). This profile/HMM does not detect HD homologues in bacterial glycine aminoacyl-tRNA synthetases (beta subunit).
Probab=92.56 E-value=0.016 Score=40.16 Aligned_cols=39 Identities=33% Similarity=0.312 Sum_probs=28.2
Q ss_pred cchHHHHHHHHHHHHhcC---C--CCCceeeeeeeecccceecc
Q 028981 122 EPQIQHLLQSAEAIRKDY---P--DEDWLHLTALIHDLGKVLTL 160 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~d~---p--~pDW~qLtGLIHDLGKvl~~ 160 (201)
.+...|.+++|..++.-. + +.+.+-++||+||+||....
T Consensus 3 ~~~~~H~~~v~~~~~~l~~~~~~~~~~~~~~a~LlHDig~~~~~ 46 (124)
T smart00471 3 YHVFEHSLRVAQLAAALAEELGLLDIELLLLAALLHDIGKPGTP 46 (124)
T ss_pred chHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHcccCccCC
Confidence 356778888777665332 1 35678899999999998753
No 7
>TIGR01596 cas3_HD CRISPR-associated endonuclease Cas3-HD. CRISPR/Cas systems are widespread, mobile systems for host defense against invasive elements such as phage. In these systems, Cas3 designates one of the core proteins shared widely by multiple types of CRISPR/Cas system. This model represents an HD-like endonuclease that occurs either separately or as the N-terminal region of Cas3, the helicase-containing CRISPR-associated protein.
Probab=91.45 E-value=0.031 Score=43.68 Aligned_cols=34 Identities=38% Similarity=0.483 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHh----------cC--CCCCceeeeeeeeccccee
Q 028981 125 IQHLLQSAEAIRK----------DY--PDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 125 i~H~lQTAEaIR~----------d~--p~pDW~qLtGLIHDLGKvl 158 (201)
.+|++.||+..+. .. +.++++-++|++||+||+-
T Consensus 2 ~~H~~~v~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~lHDiGK~~ 47 (177)
T TIGR01596 2 NEHLLDVAAVAEKLKNLDIVIADLIGKLLRELLDLLALLHDIGKIN 47 (177)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHhhHHHHHHHHHHHHccCccCC
Confidence 4688888776653 11 2368999999999999975
No 8
>TIGR00277 HDIG uncharacterized domain HDIG. This domain is found in a few known nucleotidyltransferes and in a large number of uncharacterized proteins. It contains four widely separated His residues, the second of which is part of an invariant dipeptide His-Asp in a region matched approximately by the motif HDIG.
Probab=90.53 E-value=0.067 Score=36.04 Aligned_cols=35 Identities=34% Similarity=0.419 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHH----hcCCCCCceeeeeeeecccceec
Q 028981 125 IQHLLQSAEAIR----KDYPDEDWLHLTALIHDLGKVLT 159 (201)
Q Consensus 125 i~H~lQTAEaIR----~d~p~pDW~qLtGLIHDLGKvl~ 159 (201)
..|.+.+|...+ +-+.+++.+-++||+||+||+..
T Consensus 6 ~~H~~~v~~~a~~la~~~~~~~~~l~~AalLHDiG~~~~ 44 (80)
T TIGR00277 6 LQHSLEVAKLAEALARELGLDVELARRGALLHDIGKPIT 44 (80)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHccCCccc
Confidence 445554444433 22345567889999999999873
No 9
>PF01966 HD: HD domain; InterPro: IPR006674 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity []. These enzymes appear to be involved in the nucleic acid metabolism, signal transduction and possibly other functions in bacteria, archaea and eukaryotes. The fact that all the highly conserved residues in the HD superfamily are histidines or aspartates suggests that coordination of divalent cations is essential for the activity of these proteins [].; GO: 0008081 phosphoric diester hydrolase activity, 0046872 metal ion binding; PDB: 2CQZ_A 2Q14_C 3CCG_A 2PAU_A 2PAQ_B 2PAR_B 3BG2_A 3NQW_A 2QGS_B 2DQB_D ....
Probab=89.69 E-value=0.032 Score=39.56 Aligned_cols=35 Identities=37% Similarity=0.616 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhc---C---CCCCceeeeeeeecccceec
Q 028981 125 IQHLLQSAEAIRKD---Y---PDEDWLHLTALIHDLGKVLT 159 (201)
Q Consensus 125 i~H~lQTAEaIR~d---~---p~pDW~qLtGLIHDLGKvl~ 159 (201)
+.|.+.+|+..++- . .+.+++.++||+||+||...
T Consensus 2 ~~Hs~~V~~~a~~l~~~~~~~~~~~~l~~aaLlHDiGk~~~ 42 (122)
T PF01966_consen 2 FEHSLRVAELAERLADRLGLEEDRELLRIAALLHDIGKIPT 42 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTHHST
T ss_pred hhHHHHHHHHHHHHHHHcCCchhHHHHHHHHHHHhcCCCCC
Confidence 46777666554432 2 25678999999999999873
No 10
>cd00077 HDc Metal dependent phosphohydrolases with conserved 'HD' motif
Probab=88.65 E-value=0.065 Score=37.57 Aligned_cols=35 Identities=37% Similarity=0.545 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHHhc---C----CCCCceeeeeeeeccccee
Q 028981 124 QIQHLLQSAEAIRKD---Y----PDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 124 qi~H~lQTAEaIR~d---~----p~pDW~qLtGLIHDLGKvl 158 (201)
...|.++++..+..- . ++++.+-++||+||+||..
T Consensus 3 ~~~Hs~~v~~~~~~~~~~~~~~~~~~~~l~~aaLlHDig~~~ 44 (145)
T cd00077 3 RFEHSLRVAQLARRLAEELGLSEEDIELLRLAALLHDIGKPG 44 (145)
T ss_pred hHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHhcCCcc
Confidence 456666555444332 1 2357788999999999975
No 11
>TIGR03319 YmdA_YtgF conserved hypothetical protein YmdA/YtgF.
Probab=88.06 E-value=0.26 Score=47.52 Aligned_cols=55 Identities=22% Similarity=0.237 Sum_probs=37.7
Q ss_pred HHHHHHhhhccCCCCCCCCcchHHHHHHHHHH----HHhcCCCCCceeeeeeeecccceec
Q 028981 103 WECCELLNEVVDESDPDLDEPQIQHLLQSAEA----IRKDYPDEDWLHLTALIHDLGKVLT 159 (201)
Q Consensus 103 ~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEa----IR~d~p~pDW~qLtGLIHDLGKvl~ 159 (201)
.+++.+|..|---+....+ ...|.+.+|.. .+.-+.+++...++||+||+||++.
T Consensus 311 ~~~~~~l~~l~~r~~~~~~--~l~Hs~~VA~lA~~LA~~lgld~~~a~~AGLLHDIGK~~~ 369 (514)
T TIGR03319 311 PELIKLLGRLKFRTSYGQN--VLQHSIEVAHLAGIMAAELGEDVKLAKRAGLLHDIGKAVD 369 (514)
T ss_pred HHHHHHHHHhhccccCCcc--HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHhcCcccc
Confidence 5677777765433222211 57898888765 3444567888899999999999863
No 12
>COG2316 Predicted hydrolase (HD superfamily) [General function prediction only]
Probab=87.35 E-value=0.3 Score=42.80 Aligned_cols=55 Identities=33% Similarity=0.327 Sum_probs=41.7
Q ss_pred CCCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhc----CCCCCceeeeeeeeccccee
Q 028981 98 AEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKD----YPDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 98 ~~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d----~p~pDW~qLtGLIHDLGKvl 158 (201)
+.||-+||+++|.+.|-. .+.+.|++.++..+|-- +-|..=--++||+||+--=+
T Consensus 28 ~~i~r~ea~eLlk~hv~~------e~L~kHcla~eavMr~lARe~gEDEEkw~~~GlLHD~DYe~ 86 (212)
T COG2316 28 AAINRDEAYELLKEHVPS------ESLQKHCLAVEAVMRWLAREWGEDEEKWAVTGLLHDFDYEL 86 (212)
T ss_pred HhhcchHHHHHHHHhCCc------HHHHHHHHHHHHHHHHHHHHhCccHHHHHHHhhhhhccHHh
Confidence 468889999999999843 67899999999988742 33333346899999986433
No 13
>PRK00106 hypothetical protein; Provisional
Probab=87.18 E-value=0.26 Score=48.12 Aligned_cols=55 Identities=9% Similarity=0.151 Sum_probs=41.6
Q ss_pred HHHHHHhhhccCCCCCCCCcchHHHHHHHHHHH----HhcCCCCCceeeeeeeecccceec
Q 028981 103 WECCELLNEVVDESDPDLDEPQIQHLLQSAEAI----RKDYPDEDWLHLTALIHDLGKVLT 159 (201)
Q Consensus 103 ~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaI----R~d~p~pDW~qLtGLIHDLGKvl~ 159 (201)
.|++.+|-.|-.-+.-+- ....|.+.+|... +.-+.++++.-++||+||+||++-
T Consensus 332 ~e~~~~lg~l~~r~sy~q--nl~~HSv~VA~lA~~lA~~lgld~e~a~~AGLLHDIGK~v~ 390 (535)
T PRK00106 332 PDLIKIMGRLQFRTSYGQ--NVLRHSVEVGKLAGILAGELGENVALARRAGFLHDMGKAID 390 (535)
T ss_pred HHHHHHHHHHhhhccCCC--cHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHhccCccC
Confidence 478888887765544332 3789999998865 444567899999999999999963
No 14
>PF08668 HDOD: HDOD domain; InterPro: IPR013976 This domain is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity. These members appear to be involved in the nucleic acid metabolism and signal transduction or possibly other functions and are restricted to bacteria, primarily the proteobacteria. The fact that all the highly conserved residues in the HD superfamily are histidines or aspartates suggests that coordination of divalent cations is essential for the activity of these proteins [].; PDB: 1VQR_D 3LJX_A 3P3Q_B 3MEM_A 3M1T_A 3HC1_A 3I7A_A.
Probab=83.25 E-value=0.7 Score=37.06 Aligned_cols=69 Identities=29% Similarity=0.321 Sum_probs=44.3
Q ss_pred HhcCCCCCCCHHHHHHHhh--------------hccCCCC-CCCC-cchHHHHHHHHHHHHh----cCC-CCCceeeeee
Q 028981 92 YAKLDKAEMSIWECCELLN--------------EVVDESD-PDLD-EPQIQHLLQSAEAIRK----DYP-DEDWLHLTAL 150 (201)
Q Consensus 92 ~~~~~~~~MtI~EAle~Ln--------------~lvDeSD-PD~d-lpqi~H~lQTAEaIR~----d~p-~pDW~qLtGL 150 (201)
|.+..+.--||.+|+-.|= .....+. .... .....|.+.+|..+++ .+. +++-.-++||
T Consensus 47 ~~~~~~~i~sl~~Ai~~LG~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~a~~a~~la~~~~~~~~~~a~~~gL 126 (196)
T PF08668_consen 47 YFGLRRPISSLEQAISRLGLDRIRNLALALSLRSLFPSSPPYQFNLERFWRHSLAAAAIARRLARELGFDDPDEAYLAGL 126 (196)
T ss_dssp TTTSTST--SHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCTTSCHHHHHHHHHHHHHHHHHHHHHCTCCHHHHHHHHHH
T ss_pred hcCCCCCCCCHHHHHHHhCHHHHHHHHHHHHHHHHccccchhhhhHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 3346666679999987764 1122222 1222 4567888888887753 222 3488999999
Q ss_pred eecccceecc
Q 028981 151 IHDLGKVLTL 160 (201)
Q Consensus 151 IHDLGKvl~~ 160 (201)
+||+|+++..
T Consensus 127 L~~iG~l~l~ 136 (196)
T PF08668_consen 127 LHDIGKLLLL 136 (196)
T ss_dssp HTTHHHHHHH
T ss_pred HHHHhHHHHH
Confidence 9999999876
No 15
>PRK07152 nadD putative nicotinate-nucleotide adenylyltransferase; Validated
Probab=79.21 E-value=0.46 Score=42.68 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=25.9
Q ss_pred hHHHHHHHHHHHH----hcCCCCCceeeeeeeeccccee
Q 028981 124 QIQHLLQSAEAIR----KDYPDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 124 qi~H~lQTAEaIR----~d~p~pDW~qLtGLIHDLGKvl 158 (201)
-..|.+.+|...+ +-+.+++=..++||+||+||+.
T Consensus 197 ~~~HSl~VA~~A~~LA~~~g~d~~~a~~AGLLHDIGK~~ 235 (342)
T PRK07152 197 RYKHCLRVAQLAAELAKKNNLDPKKAYYAGLYHDITKEW 235 (342)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHhhccC
Confidence 6789888886543 2233556677899999999976
No 16
>PRK12703 tRNA 2'-O-methylase; Reviewed
Probab=78.31 E-value=1.3 Score=41.25 Aligned_cols=60 Identities=27% Similarity=0.292 Sum_probs=40.0
Q ss_pred cCCCCCCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHH---HHhc-CCCCCceeeeeeeecccceec
Q 028981 94 KLDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEA---IRKD-YPDEDWLHLTALIHDLGKVLT 159 (201)
Q Consensus 94 ~~~~~~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEa---IR~d-~p~pDW~qLtGLIHDLGKvl~ 159 (201)
|.....++..||+++|..+--+ + ..+.|.++.|.. |-+. +.+.+=+.++||+||+||...
T Consensus 164 k~v~~ip~~ee~l~Ll~k~~~~--e----~l~~Hs~rVa~lA~~LA~~~~~D~~ll~aAALLHDIGK~k~ 227 (339)
T PRK12703 164 KLVKIIPDEDQCLDLLKKYGAS--D----LLIRHVKTVYKLAMRIADCINADRRLVAAGALLHDIGRTKT 227 (339)
T ss_pred ccccCCCCHHHHHHHHHHcCCC--h----HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcccccc
Confidence 3444568999999999988321 1 168888765543 3222 234555557899999999764
No 17
>TIGR00295 conserved hypothetical protein TIGR00295. This set of orthologs is narrowly defined, comprising proteins found in three Archaea but not in Pyrococcus horikoshii. The closest homologs are other archaeal proteins that appear to be represent distinct orthologous clusters.
Probab=76.26 E-value=0.91 Score=37.02 Aligned_cols=36 Identities=31% Similarity=0.380 Sum_probs=24.8
Q ss_pred hHHHHHHHHHHHH---hc-C-----CCCCceeeeeeeecccceec
Q 028981 124 QIQHLLQSAEAIR---KD-Y-----PDEDWLHLTALIHDLGKVLT 159 (201)
Q Consensus 124 qi~H~lQTAEaIR---~d-~-----p~pDW~qLtGLIHDLGKvl~ 159 (201)
.+.|.+..|...+ +. + .+++=+-++||+||+||+..
T Consensus 14 ~~~Hs~~Va~~A~~ia~~~~~~~~~~d~~~l~~aaLLHDIGK~~~ 58 (164)
T TIGR00295 14 VRRHCLAVARVAMELAENIRKKGHEVDMDLVLKGALLHDIGRART 58 (164)
T ss_pred HHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHhcCCcccC
Confidence 6788877665422 22 1 35566778999999999864
No 18
>TIGR02621 cas3_GSU0051 CRISPR-associated helicase Cas3, Anaes-subtype. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.
Probab=74.77 E-value=1.2 Score=45.91 Aligned_cols=37 Identities=27% Similarity=0.218 Sum_probs=29.1
Q ss_pred cchHHHHHHHHHHHHhc---CCCCCc---eeeeeeeeccccee
Q 028981 122 EPQIQHLLQSAEAIRKD---YPDEDW---LHLTALIHDLGKVL 158 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~d---~p~pDW---~qLtGLIHDLGKvl 158 (201)
-+.-+|+..+|+..+.- ...++| ..++||+|||||.-
T Consensus 674 q~L~eHl~~va~lA~~fa~~~gl~~~~~~~~laGllHDlGK~~ 716 (844)
T TIGR02621 674 VALSDHLDNVFEVAKNFVAKLGLGDLDKAVRQAARLHDLGKQR 716 (844)
T ss_pred EEHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccccCC
Confidence 56789999998877643 335677 57999999999976
No 19
>PRK12705 hypothetical protein; Provisional
Probab=74.11 E-value=1.5 Score=42.81 Aligned_cols=54 Identities=20% Similarity=0.183 Sum_probs=34.5
Q ss_pred HHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHH----hcCCCCCceeeeeeeeccccee
Q 028981 103 WECCELLNEVVDESDPDLDEPQIQHLLQSAEAIR----KDYPDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 103 ~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR----~d~p~pDW~qLtGLIHDLGKvl 158 (201)
.+++.+|-.+---+.+.. ..+.|.+.+|...+ +-+-+++....+||+||+||+.
T Consensus 305 ~~li~~Lg~L~~R~sygq--nvl~HSl~VA~lA~~LA~~lGld~d~a~~AGLLHDIGK~i 362 (508)
T PRK12705 305 PGLVRLLGRLYFRTSYGQ--NVLSHSLEVAHLAGIIAAEIGLDPALAKRAGLLHDIGKSI 362 (508)
T ss_pred HHHHHHHHHHhhcccCCc--hHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHcCCcc
Confidence 345555544422222222 25889999888664 3344567777899999999986
No 20
>PRK12704 phosphodiesterase; Provisional
Probab=65.01 E-value=3.5 Score=39.98 Aligned_cols=54 Identities=24% Similarity=0.223 Sum_probs=34.6
Q ss_pred HHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHH----hcCCCCCceeeeeeeeccccee
Q 028981 103 WECCELLNEVVDESDPDLDEPQIQHLLQSAEAIR----KDYPDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 103 ~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR----~d~p~pDW~qLtGLIHDLGKvl 158 (201)
.+++.+|..+ .-.|+.+. ....|.+-+|-..+ .-+.+++-.-++||+||+||+.
T Consensus 317 ~~i~~ll~~l-~~R~~~~q-n~l~Hs~~Va~lA~~lA~~lgld~~~a~~AgLLHDIGK~~ 374 (520)
T PRK12704 317 PELIKLLGRL-KYRTSYGQ-NVLQHSIEVAHLAGLMAAELGLDVKLAKRAGLLHDIGKAL 374 (520)
T ss_pred HHHHHHHHHh-hccCcCCC-cHhHHHHHHHHHHHHHHHHhCcCHHHHHHHHHHHccCcCc
Confidence 4566677666 33333332 24678877665443 2244567778999999999986
No 21
>PRK10885 cca multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; Reviewed
Probab=61.44 E-value=1.9 Score=40.35 Aligned_cols=36 Identities=31% Similarity=0.186 Sum_probs=27.3
Q ss_pred cchHHHHHHHHHHHHhcCCCCCceeeeeeeeccccee
Q 028981 122 EPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl 158 (201)
.+...|.+.+-+.+.+-- .+..+-++.|+||+||-.
T Consensus 226 ~dv~~Htl~~l~~~~~l~-~~l~lr~AaLlHDlGK~~ 261 (409)
T PRK10885 226 IDTGIHTLMVLDQAAKLS-PSLDVRFAALCHDLGKGL 261 (409)
T ss_pred CcHHHHHHHHHHHHHhcC-CCHHHHHHHHhccccCCC
Confidence 456789888887776643 344688999999999965
No 22
>COG2206 c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms]
Probab=60.63 E-value=3.7 Score=37.10 Aligned_cols=43 Identities=26% Similarity=0.288 Sum_probs=29.1
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHhcC---CCC----Cceeeeeeeecccceec
Q 028981 113 VDESDPDLDEPQIQHLLQSAEAIRKDY---PDE----DWLHLTALIHDLGKVLT 159 (201)
Q Consensus 113 vDeSDPD~dlpqi~H~lQTAEaIR~d~---p~p----DW~qLtGLIHDLGKvl~ 159 (201)
++..|+- .-.|...+|+-.+.-+ .-+ .++-++||+||+||+-.
T Consensus 142 ~~~kd~~----t~~Hs~~va~~a~~ia~~lgl~~~~i~~l~~aalLHDIGKi~i 191 (344)
T COG2206 142 IKAKDDY----TYGHSVRVAELAEAIAKKLGLSEEKIEELALAGLLHDIGKIGI 191 (344)
T ss_pred ccccchh----HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhcccccC
Confidence 6666666 4568777776554432 122 35678999999999864
No 23
>PF13328 HD_4: HD domain; PDB: 3NR1_B.
Probab=59.57 E-value=3.4 Score=32.73 Aligned_cols=36 Identities=31% Similarity=0.326 Sum_probs=24.5
Q ss_pred CCCCcchHHHHHHHHHHHHhcCCCCCceeeeeeeecc
Q 028981 118 PDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDL 154 (201)
Q Consensus 118 PD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDL 154 (201)
.....|-+.|++++|+.+..-+ -..=...+||+||.
T Consensus 14 ~~~g~py~~H~~~va~~l~~~~-~d~~~i~aalLHD~ 49 (153)
T PF13328_consen 14 RKSGEPYISHPLEVAEILAELG-LDEETIAAALLHDV 49 (153)
T ss_dssp -ST--BTTHHHHHHHHHHHTS----HHHHHHHHHTTH
T ss_pred CCCCCcHHHHHHHHHHHHHHcC-CCHHHHhhheeecH
Confidence 3455899999999999996665 33336788999984
No 24
>PRK03381 PII uridylyl-transferase; Provisional
Probab=58.97 E-value=2.8 Score=42.24 Aligned_cols=35 Identities=34% Similarity=0.470 Sum_probs=25.2
Q ss_pred chHHHHHHHHHHH---HhcCCCCCceeeeeeeecccce
Q 028981 123 PQIQHLLQSAEAI---RKDYPDEDWLHLTALIHDLGKV 157 (201)
Q Consensus 123 pqi~H~lQTAEaI---R~d~p~pDW~qLtGLIHDLGKv 157 (201)
+.-+|.+.|-+.+ ...-+.|+.+-|++|+||+||-
T Consensus 420 tVd~Htl~~l~~~~~~~~~~~~~~lL~lAaLlHDiGKg 457 (774)
T PRK03381 420 TVDRHLVETAVRAAALTRRVARPDLLLLGALLHDIGKG 457 (774)
T ss_pred hHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHhhcCC
Confidence 4456877774444 3444567889999999999993
No 25
>PRK01759 glnD PII uridylyl-transferase; Provisional
Probab=57.36 E-value=10 Score=38.72 Aligned_cols=35 Identities=26% Similarity=0.362 Sum_probs=26.3
Q ss_pred cchHHHHHHHHHHHHh------------------cCCCCCceeeeeeeecccc
Q 028981 122 EPQIQHLLQSAEAIRK------------------DYPDEDWLHLTALIHDLGK 156 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~------------------d~p~pDW~qLtGLIHDLGK 156 (201)
.+.-+|.+.|=+.+++ .-+.+..+-|++|+||+||
T Consensus 435 ytVd~Htl~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~lAaLlHDIGK 487 (854)
T PRK01759 435 YTVDEHTLRVMLKLESFLDEESAEQHPICHQIFSQLSDRTLLYIAALFHDIAK 487 (854)
T ss_pred CcHHHHHHHHHHHHHHHhcccccccchhHHHHHHhcCCHHHHHHHHHHHhhcC
Confidence 4666788887776542 2246778899999999999
No 26
>TIGR03760 ICE_TraI_Pfluor integrating conjugative element relaxase, PFL_4751 family. Members of this protein family are the TraI putative relaxases required for transfer by a subclass of integrating conjugative elements (ICE) as found in Pseudomonas fluorescens Pf-5, and understood from study of two related ICE, SXT and R391. This model represents the N-terminal domain. Note that no homology is detected to the similarly named TraI relaxase of the F plasmid.
Probab=55.59 E-value=3.3 Score=35.97 Aligned_cols=36 Identities=36% Similarity=0.637 Sum_probs=23.0
Q ss_pred hHHHHHHH---HHHHHhcCCCC-------------Cc---eeeeeeeecccceec
Q 028981 124 QIQHLLQS---AEAIRKDYPDE-------------DW---LHLTALIHDLGKVLT 159 (201)
Q Consensus 124 qi~H~lQT---AEaIR~d~p~p-------------DW---~qLtGLIHDLGKvl~ 159 (201)
.++|-+.+ |-.+++-+.-| .| +-.+||+|||||++.
T Consensus 68 Ll~HtLev~~~a~~l~~~y~~p~~~~~e~~~~~~~~w~~~~~~aaLlHDlgK~~~ 122 (218)
T TIGR03760 68 LLDHTLEVTAAAVRLSKGYLLPPGAAPEEQAAQSDAWNAAVFYAALLHDLGKLAV 122 (218)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHhhhhhhH
Confidence 56676666 44555555222 22 456799999999964
No 27
>PRK05092 PII uridylyl-transferase; Provisional
Probab=54.73 E-value=3.4 Score=42.28 Aligned_cols=33 Identities=18% Similarity=0.273 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhc------------------CCCCCceeeeeeeecccce
Q 028981 125 IQHLLQSAEAIRKD------------------YPDEDWLHLTALIHDLGKV 157 (201)
Q Consensus 125 i~H~lQTAEaIR~d------------------~p~pDW~qLtGLIHDLGKv 157 (201)
-.|.++|-+.+++- -+.|+.+-|++|+||+||-
T Consensus 495 d~Htl~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~lAaLlHDIGKg 545 (931)
T PRK05092 495 DEHTIRAIGVLAEIERGELADEHPLASELMPKIESRRALYVAVLLHDIAKG 545 (931)
T ss_pred hHHHHHHHHHHHHHhcccccccchhHHHHHHhcCCHHHHHHHHHHHHhhcC
Confidence 35888777766531 2456789999999999993
No 28
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=54.12 E-value=43 Score=26.54 Aligned_cols=55 Identities=29% Similarity=0.449 Sum_probs=43.7
Q ss_pred HhhhhHHHHHHHHHHHHhc--CCCCCCCHHHHHHHhhh------ccCCCCCCCCcchHHHHHHHHHH
Q 028981 76 QHINQTYDFVKKMREEYAK--LDKAEMSIWECCELLNE------VVDESDPDLDEPQIQHLLQSAEA 134 (201)
Q Consensus 76 ~H~~QTvdFv~~~r~~~~~--~~~~~MtI~EAle~Ln~------lvDeSDPD~dlpqi~H~lQTAEa 134 (201)
..+.|+.++|.+..++|+- .|+-|-+|-||-..|-. ||++ ++ -|.+.|+++-|+.
T Consensus 16 ~~~~~g~~~v~~i~~~~gI~diN~IKPGIgEaTRvLLRRvP~~vLVr~--~~--~pd~~Hl~~LA~e 78 (100)
T PF15608_consen 16 APTWQGWAEVERIAERYGISDINLIKPGIGEATRVLLRRVPWKVLVRD--PD--DPDLAHLLLLAEE 78 (100)
T ss_pred chhHHHHHHHHHHHHHhCCCCcccccCChhHHHHHHHhcCCCEEEECC--CC--CccHHHHHHHHHH
Confidence 4577899999999999974 66889999999998873 3443 22 2788999999985
No 29
>PRK05007 PII uridylyl-transferase; Provisional
Probab=50.79 E-value=5.4 Score=40.85 Aligned_cols=35 Identities=26% Similarity=0.411 Sum_probs=26.4
Q ss_pred cchHHHHHHHHHHHHh------------------cCCCCCceeeeeeeecccc
Q 028981 122 EPQIQHLLQSAEAIRK------------------DYPDEDWLHLTALIHDLGK 156 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~------------------d~p~pDW~qLtGLIHDLGK 156 (201)
.+.-.|.+.+-+.+++ +-++++.+.|++|+||+||
T Consensus 460 ytVd~Htl~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~lL~lAaLlHDIGK 512 (884)
T PRK05007 460 YTVDEHTIRVLLKLESFADEETRQRHPLCVELYPRLPKKELLLLAALFHDIAK 512 (884)
T ss_pred CcHhHHHHHHHHHHHHHhcccccccchHHHHHHHhcCChhHHHHHHHHHhhcC
Confidence 4555788888776652 1246789999999999999
No 30
>PRK00275 glnD PII uridylyl-transferase; Provisional
Probab=48.84 E-value=4.7 Score=41.36 Aligned_cols=36 Identities=31% Similarity=0.448 Sum_probs=26.6
Q ss_pred cchHHHHHHHHHHHHh------------------cCCCCCceeeeeeeecccce
Q 028981 122 EPQIQHLLQSAEAIRK------------------DYPDEDWLHLTALIHDLGKV 157 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~------------------d~p~pDW~qLtGLIHDLGKv 157 (201)
.+.-+|.+.|-+.+++ .-.+++.+-|++|+||+||-
T Consensus 459 ytVdeHtl~~v~~l~~l~~~~~~~~~p~~~~l~~~l~~~~lL~lAaLlHDIGKg 512 (895)
T PRK00275 459 YTVDAHTLNLIKNLRKLRYPEVSEKFPLASKLMGRLPKPELLYIAGLYHDIGKG 512 (895)
T ss_pred CcHHHHHHHHHHHHHHhhcccccccCchHHHHHHhcCCHHHHHHHHHHHhhhcC
Confidence 4556788888776654 11246789999999999994
No 31
>COG1418 Predicted HD superfamily hydrolase [General function prediction only]
Probab=45.86 E-value=9.3 Score=33.06 Aligned_cols=37 Identities=32% Similarity=0.443 Sum_probs=25.4
Q ss_pred hHHHHHHH---HHHHHhc-CCCCCceeeeeeeecccceecc
Q 028981 124 QIQHLLQS---AEAIRKD-YPDEDWLHLTALIHDLGKVLTL 160 (201)
Q Consensus 124 qi~H~lQT---AEaIR~d-~p~pDW~qLtGLIHDLGKvl~~ 160 (201)
.+.|.+.+ |..|-+. +-|++=...+||+||+||....
T Consensus 37 ~l~H~~~Va~lA~~Ia~~~g~D~~l~~~aaLLHDIg~~~~~ 77 (222)
T COG1418 37 VLEHSLRVAYLAYRIAEEEGVDPDLALRAALLHDIGKAIDH 77 (222)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcccccc
Confidence 34555554 4555555 4466777889999999999843
No 32
>PRK04374 PII uridylyl-transferase; Provisional
Probab=45.03 E-value=7.9 Score=39.82 Aligned_cols=36 Identities=28% Similarity=0.267 Sum_probs=25.4
Q ss_pred cchHHHHHHHHHHHHh------------------cCCCCCceeeeeeeecccce
Q 028981 122 EPQIQHLLQSAEAIRK------------------DYPDEDWLHLTALIHDLGKV 157 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~------------------d~p~pDW~qLtGLIHDLGKv 157 (201)
.+.-+|.+.+=+.+++ .-+.|+.+-|++|+||+||-
T Consensus 448 ytVd~Htl~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~lL~lAaLlHDIGKg 501 (869)
T PRK04374 448 YTVDQHTLMVLRNIALFAAGRADERFSIAHEVWPRLRKPELLLLAGLFHDIAKG 501 (869)
T ss_pred CcHHHHHHHHHHHHHHHhccccccccccHHHHHhccCCccHHHHHHHHHhccCC
Confidence 4556677777655542 11347889999999999993
No 33
>PRK08071 L-aspartate oxidase; Provisional
Probab=44.56 E-value=34 Score=32.39 Aligned_cols=73 Identities=25% Similarity=0.423 Sum_probs=48.4
Q ss_pred HHHHHHHHhcCCCCCCCHHHHHHHhhhccCCC---CCC---CCcchHHHHHHHHHHH---------------HhcCCCCC
Q 028981 85 VKKMREEYAKLDKAEMSIWECCELLNEVVDES---DPD---LDEPQIQHLLQSAEAI---------------RKDYPDED 143 (201)
Q Consensus 85 v~~~r~~~~~~~~~~MtI~EAle~Ln~lvDeS---DPD---~dlpqi~H~lQTAEaI---------------R~d~p~pD 143 (201)
.++...+|....|..-.+.+|+..|+.|-... +.+ .+.-.+..++.+|+.| |.|||...
T Consensus 415 l~~~m~~~~gi~R~~~~L~~a~~~l~~l~~~~~~~~~~~~~~~~~e~~~~l~~a~~~~~aal~R~ESRG~H~R~D~P~~~ 494 (510)
T PRK08071 415 IQEKMMKYVGIVRTEQSLSEAKRWLEKYGVRNMILDHDALTNEEIELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHRN 494 (510)
T ss_pred HHHHHHhhccEEEcHHHHHHHHHHHHHHHHhhhhccccccchhHHHHHhHHHHHHHHHHHHHhCCCCccceecCCCCccc
Confidence 44455667777788888999999999884111 111 1112456788888886 55688778
Q ss_pred ceeeeeeeeccccee
Q 028981 144 WLHLTALIHDLGKVL 158 (201)
Q Consensus 144 W~qLtGLIHDLGKvl 158 (201)
|...+ ++-.-||+.
T Consensus 495 ~~~~~-~~~~~~~~~ 508 (510)
T PRK08071 495 WRGKE-IVRTKRKLQ 508 (510)
T ss_pred cCceE-EEecCCcee
Confidence 97666 777777764
No 34
>PRK13480 3'-5' exoribonuclease YhaM; Provisional
Probab=43.71 E-value=6.6 Score=35.92 Aligned_cols=33 Identities=42% Similarity=0.699 Sum_probs=21.9
Q ss_pred HHHHHHHHHhcCCC--CCceeeeeeeecccceecc
Q 028981 128 LLQSAEAIRKDYPD--EDWLHLTALIHDLGKVLTL 160 (201)
Q Consensus 128 ~lQTAEaIR~d~p~--pDW~qLtGLIHDLGKvl~~ 160 (201)
+++.|.+|-..||. .|=+-..+|+||+||+.-+
T Consensus 167 v~~~~~~l~~~y~~~n~dll~agalLHDiGKi~E~ 201 (314)
T PRK13480 167 MLRLAKSICDLYPSLNKDLLYAGIILHDLGKVIEL 201 (314)
T ss_pred HHHHHHHHHHhccccCHHHHHHHHHHHHhhhHHHh
Confidence 34445555555653 3446667899999999876
No 35
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=43.54 E-value=78 Score=25.54 Aligned_cols=52 Identities=23% Similarity=0.380 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhc--CC--CCCCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCC
Q 028981 83 DFVKKMREEYAK--LD--KAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPD 141 (201)
Q Consensus 83 dFv~~~r~~~~~--~~--~~~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~p~ 141 (201)
.|+..+++-|.+ ++ ...||..||++.|.- .|+.+...|.-++. +.+++-|||
T Consensus 41 ~~~~~~~~~~~~~~~~~f~~~Ms~~eAy~ILGv-----~~~As~~eIkkaYR--rLa~~~HPD 96 (116)
T PTZ00100 41 GFNPSLGSLFLKNDLKGFENPMSKSEAYKILNI-----SPTASKERIREAHK--QLMLRNHPD 96 (116)
T ss_pred hhhHHHHHHHhccccccccCCCCHHHHHHHcCC-----CCCCCHHHHHHHHH--HHHHHhCCC
Confidence 467778877754 33 458999999999982 23444555555544 444555664
No 36
>TIGR00691 spoT_relA (p)ppGpp synthetase, RelA/SpoT family. (p)ppGpp is a regulatory metabolite of the stringent response, but appears also to be involved in antibiotic biosynthesis in some species.
Probab=43.17 E-value=13 Score=37.23 Aligned_cols=34 Identities=35% Similarity=0.358 Sum_probs=26.9
Q ss_pred CCcchHHHHHHHHHHHHhcCCCCCceeeeeeeecc
Q 028981 120 LDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDL 154 (201)
Q Consensus 120 ~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDL 154 (201)
...|.+.|.+++|+.+..-+.+++ ...+||+||.
T Consensus 16 sg~PYi~Hpl~VA~iL~~~~~D~~-~i~AaLLHDv 49 (683)
T TIGR00691 16 SGEPYIIHPLAVALILAELGMDEE-TVCAALLHDV 49 (683)
T ss_pred CCCcHHHHHHHHHHHHHHhCCCHH-HHHHHhccch
Confidence 347899999999999997664333 5668999996
No 37
>PF05964 FYRN: F/Y-rich N-terminus; InterPro: IPR003888 The "FY-rich" domain N-terminal region is sometimes closely juxtaposed with the C-terminal region (IPR003889 from INTERPRO), but sometimes is far distant. It is of unknown function, but occurs frequently in chromatin-associated proteins like trithorax and its homologues.; GO: 0005634 nucleus; PDB: 2WZO_A.
Probab=42.96 E-value=11 Score=25.96 Aligned_cols=26 Identities=27% Similarity=0.570 Sum_probs=15.0
Q ss_pred eeecccceecccCCCCCCCceeecCceeecc
Q 028981 150 LIHDLGKVLTLPKFGGLPQWAVVGDTFPLGC 180 (201)
Q Consensus 150 LIHDLGKvl~~~~fg~epQWavvGDTfpVGC 180 (201)
.||.||+|... .|.|...-=.||+|=
T Consensus 5 ~v~sLG~i~~~-----~~~fh~~~~IyP~Gy 30 (54)
T PF05964_consen 5 TVHSLGKIVPD-----RPAFHSERYIYPVGY 30 (54)
T ss_dssp EEEEEEE---S-----SGGGB-SS-B--EEE
T ss_pred EEEECeEEeCC-----CCCccCCCEEeeCCE
Confidence 48999999943 367988899999993
No 38
>PRK03059 PII uridylyl-transferase; Provisional
Probab=42.07 E-value=8.4 Score=39.39 Aligned_cols=36 Identities=28% Similarity=0.373 Sum_probs=26.3
Q ss_pred cchHHHHHHHHHHHHh------------------cCCCCCceeeeeeeecccce
Q 028981 122 EPQIQHLLQSAEAIRK------------------DYPDEDWLHLTALIHDLGKV 157 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~------------------d~p~pDW~qLtGLIHDLGKv 157 (201)
.+.-+|.+.|-+.+++ .-+.++.+.|++|+||+||-
T Consensus 439 ytVd~Htl~~v~~l~~~~~~~~~~~~p~~~~~~~~~~~~~lL~LAaLlHDIGKg 492 (856)
T PRK03059 439 YTVDQHILMVLRNLRRFAMAEHAHEYPFCSQLIANFDRPWLLYVAALFHDIAKG 492 (856)
T ss_pred CcHhHHHHHHHHHHHHhhccccccccchHHHHHHhcCChhHHHHHHHHHhhccC
Confidence 3556688888777654 11236788999999999993
No 39
>PRK14068 exodeoxyribonuclease VII small subunit; Provisional
Probab=41.03 E-value=35 Score=25.49 Aligned_cols=42 Identities=17% Similarity=0.187 Sum_probs=35.3
Q ss_pred CCCCCHHHHHHHhhhccCC-CCCCCCcchHHHHHHHHHHHHhc
Q 028981 97 KAEMSIWECCELLNEVVDE-SDPDLDEPQIQHLLQSAEAIRKD 138 (201)
Q Consensus 97 ~~~MtI~EAle~Ln~lvDe-SDPD~dlpqi~H~lQTAEaIR~d 138 (201)
+.++|..+|++.|.++|.. .++|++|.++.-+|+.|-.+-+.
T Consensus 3 ~~~~sfEeal~~Le~IV~~LE~gdl~Leesl~lyeeG~~L~k~ 45 (76)
T PRK14068 3 KETQSFEEMMQELEQIVQKLDNETVSLEESLDLYQRGMKLSAA 45 (76)
T ss_pred CCccCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 3578999999999999976 78899999999999887665543
No 40
>PF06784 UPF0240: Uncharacterised protein family (UPF0240); InterPro: IPR009622 This is a group of proteins of unknown function.
Probab=40.76 E-value=16 Score=31.15 Aligned_cols=34 Identities=32% Similarity=0.554 Sum_probs=27.3
Q ss_pred CCCCCCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcC
Q 028981 95 LDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDY 139 (201)
Q Consensus 95 ~~~~~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~ 139 (201)
..++++|+.||+++|+..- .+|. -.|||.|-.+|
T Consensus 113 vPkGkltl~qal~lL~~Hq--~~P~---------~WtaekIA~eY 146 (179)
T PF06784_consen 113 VPKGKLTLRQALELLNNHQ--LDPE---------TWTAEKIAQEY 146 (179)
T ss_pred CCCCceeHHHHHHHHHHhc--cCcc---------ccCHHHHHHHh
Confidence 4589999999999999764 3443 35799999988
No 41
>PRK11092 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; Provisional
Probab=40.61 E-value=26 Score=35.51 Aligned_cols=53 Identities=19% Similarity=0.230 Sum_probs=33.9
Q ss_pred HHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCceeeeeeeeccc
Q 028981 102 IWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLG 155 (201)
Q Consensus 102 I~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLG 155 (201)
+..|+.+-......--.....|.+.|.+++|+.+..-+-+.+ .-.+||+||.-
T Consensus 23 l~~A~~~A~~aH~gQ~rksGePYi~Hpl~VA~iLa~l~~D~~-ti~AaLLHDvv 75 (702)
T PRK11092 23 LRQAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMRLDYE-TLMAALLHDVI 75 (702)
T ss_pred HHHHHHHHHHhccCCcCCCCCcHHHHHHHHHHHHHHcCCCHH-HHHHhcccchh
Confidence 445555554333221122346889999999999987653333 57899999973
No 42
>PRK00227 glnD PII uridylyl-transferase; Provisional
Probab=40.50 E-value=8.2 Score=39.02 Aligned_cols=37 Identities=30% Similarity=0.323 Sum_probs=27.0
Q ss_pred cchHHHHHHHHHHHHh---cCCCCCceeeeeeeeccccee
Q 028981 122 EPQIQHLLQSAEAIRK---DYPDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~---d~p~pDW~qLtGLIHDLGKvl 158 (201)
.+.-+|.+.|-+.+.+ ....|+=+-|++|+||+||-.
T Consensus 379 ytVDeHTL~~l~~~~~~~~~~~~~~lL~LAALlHDIGKg~ 418 (693)
T PRK00227 379 HTIDEHSLNTVANCALETVTVARPDLLLLGALYHDIGKGY 418 (693)
T ss_pred CcHHHHHHHHHHHHHHhhhccCccHHHHHHHHHHhhcCCC
Confidence 3556699988776543 334567778999999999954
No 43
>PRK07094 biotin synthase; Provisional
Probab=39.61 E-value=63 Score=28.30 Aligned_cols=44 Identities=36% Similarity=0.557 Sum_probs=31.5
Q ss_pred CCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 028981 100 MSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIH 152 (201)
Q Consensus 100 MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIH 152 (201)
+|..||+++|+. +| ...+.-|+++|..||+.+ ..+=+++.|+|.
T Consensus 1 ~t~~e~~~ll~~----~~----~~~~~~L~~~A~~~r~~~-~g~~v~~~~~i~ 44 (323)
T PRK07094 1 LTRDEILELLSN----DD----EEELKYLFKAADEVRKKY-VGDEVHLRGLIE 44 (323)
T ss_pred CCHHHHHHHhcC----CC----HHHHHHHHHHHHHHHHHh-CCCEEEEEEEEE
Confidence 477899998853 22 224567999999999998 455566666665
No 44
>PRK14064 exodeoxyribonuclease VII small subunit; Provisional
Probab=39.30 E-value=43 Score=24.87 Aligned_cols=42 Identities=12% Similarity=0.100 Sum_probs=34.9
Q ss_pred CCCCCHHHHHHHhhhccCC-CCCCCCcchHHHHHHHHHHHHhc
Q 028981 97 KAEMSIWECCELLNEVVDE-SDPDLDEPQIQHLLQSAEAIRKD 138 (201)
Q Consensus 97 ~~~MtI~EAle~Ln~lvDe-SDPD~dlpqi~H~lQTAEaIR~d 138 (201)
+.++|..+|+..|.++|.. .++++.|..+.-+|+.+-.+-+.
T Consensus 3 ~k~~sfEe~l~~LE~IV~~LE~~~l~Leesl~~ye~G~~L~k~ 45 (75)
T PRK14064 3 TKKKTFEEAIAELETIVEALENGSASLEDSLDMYQKGIELTKL 45 (75)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Confidence 4568999999999999976 67899999999998887666554
No 45
>KOG4481 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.55 E-value=29 Score=30.55 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=25.5
Q ss_pred CCCCCCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcC
Q 028981 95 LDKAEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDY 139 (201)
Q Consensus 95 ~~~~~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~ 139 (201)
..+++.||.|||++||. -.-+|. -||||-|-..+
T Consensus 112 Ipkgkit~~eAL~~ln~--hkL~pe---------tw~AekIA~ey 145 (194)
T KOG4481|consen 112 IPKGKITIVEALTFLNN--HKLLPE---------TWTAEKIAQEY 145 (194)
T ss_pred CCCCceeHHHHHHHHhh--hhcChh---------hhHHHHHHHHH
Confidence 44789999999999997 333343 37888888776
No 46
>PF12477 TraW_N: Sex factor F TraW protein N terminal
Probab=37.70 E-value=12 Score=23.92 Aligned_cols=12 Identities=42% Similarity=0.930 Sum_probs=9.1
Q ss_pred CceeecCceeec
Q 028981 168 QWAVVGDTFPLG 179 (201)
Q Consensus 168 QWavvGDTfpVG 179 (201)
.=-++|+|||+|
T Consensus 20 dLG~~G~~fpIa 31 (31)
T PF12477_consen 20 DLGVIGPTFPIA 31 (31)
T ss_pred hccccccccccC
Confidence 345789999986
No 47
>TIGR03401 cyanamide_fam HD domain protein, cyanamide hydratase family. Members of this protein family are known, so far, in the Ascomycota, a branch of the Fungi, and contain an HD domain (pfam01966), found typically in various metal-dependent phosphohydrolases. The only characterized member of this family, from the soil fungus Myrothecium verrucaria, is cyanamide hydratase (EC 4.2.1.69), a zinc-containing homohexamer that adds water to the fertilizer cyanamide (NCNH2), a nitrile compound, to produce urea (NH2-CO-NH2). Homologs are likely to be nitrile hydratases.
Probab=37.61 E-value=9.5 Score=33.25 Aligned_cols=39 Identities=21% Similarity=0.205 Sum_probs=25.7
Q ss_pred CCcchHHHHHHHHHHHHh-c----CCCCCceeeeeeeeccccee
Q 028981 120 LDEPQIQHLLQSAEAIRK-D----YPDEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 120 ~dlpqi~H~lQTAEaIR~-d----~p~pDW~qLtGLIHDLGKvl 158 (201)
-++.-+...+..|.+|-+ . ..++.=+-+++|+||+|+.-
T Consensus 55 ~~~~Hs~RV~~~a~~ia~~e~~~~~~D~evl~lAALLHDIG~~~ 98 (228)
T TIGR03401 55 ETYNHSLRVYYYGLAIARDQFPEWDLSDETWFLTCLLHDIGTTD 98 (228)
T ss_pred hhhHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHHHHhhcccc
Confidence 345555556666776643 2 23556678999999999853
No 48
>TIGR01693 UTase_glnD [Protein-PII] uridylyltransferase. This model describes GlnD, the uridylyltransferase/uridylyl-removing enzyme for the nitrogen regulatory protein PII. Not all homologs of PII share the property of uridylyltransferase modification on the characteristic Tyr residue (see Prosite pattern PS00496 and document PDOC00439), but the modification site is preserved in the PII homolog of all species with a member of this family.
Probab=36.91 E-value=8.1 Score=39.01 Aligned_cols=35 Identities=31% Similarity=0.399 Sum_probs=24.8
Q ss_pred chHHHHHHHHHHHHhcC------------------CCCCceeeeeeeecccce
Q 028981 123 PQIQHLLQSAEAIRKDY------------------PDEDWLHLTALIHDLGKV 157 (201)
Q Consensus 123 pqi~H~lQTAEaIR~d~------------------p~pDW~qLtGLIHDLGKv 157 (201)
+.-.|.+.+.+.+.+-. ++++.+-|++|+||+||-
T Consensus 428 tVd~Htl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~lAaLlHDiGKg 480 (850)
T TIGR01693 428 TVDEHTLRTVVHLAPFARGRLAREHPLASELMPKIEDPELLYLAALLHDIGKG 480 (850)
T ss_pred chhHHHHHHHHHHHHHhccccccccccHHHHHhccCCHHHHHHHHHHHHHhcC
Confidence 34458888877765421 135678999999999993
No 49
>TIGR02692 tRNA_CCA_actino tRNA adenylyltransferase. The enzyme tRNA adenylyltransferase, also called tRNA-nucleotidyltransferase and CCA-adding enzyme, can add or repair the required CCA triplet at the 3'-end of tRNA molecules. Genes encoding tRNA include the CCA tail in some but not all bacteria, and this enzyme may be required for viability. Members of this family represent a distinct clade within the larger family pfam01743 (tRNA nucleotidyltransferase/poly(A) polymerase family protein). The example from Streptomyces coelicolor was shown to act as a CCA-adding enzyme and not as a poly(A) polymerase.
Probab=36.50 E-value=15 Score=34.62 Aligned_cols=38 Identities=29% Similarity=0.300 Sum_probs=26.8
Q ss_pred cchHHHHHHHHHHHHhcCC-CCC-ceeeeeeeecccceec
Q 028981 122 EPQIQHLLQSAEAIRKDYP-DED-WLHLTALIHDLGKVLT 159 (201)
Q Consensus 122 lpqi~H~lQTAEaIR~d~p-~pD-W~qLtGLIHDLGKvl~ 159 (201)
.+...|.+++-+.+.+-.. .++ .+.|+.|+||+||-..
T Consensus 257 ~~v~~Htl~vl~~~~~l~~~~~~~~l~lAaLLHDiGK~~t 296 (466)
T TIGR02692 257 KDVYEHSLTVLRQAIDLEDDGPDLVLRWAALLHDIGKPAT 296 (466)
T ss_pred CcHHHHHHHHHHHHHhccccccCHHHHHHHHHhhccCCCC
Confidence 4677898888776643211 123 6899999999999653
No 50
>PRK14067 exodeoxyribonuclease VII small subunit; Provisional
Probab=35.29 E-value=50 Score=24.91 Aligned_cols=42 Identities=19% Similarity=0.191 Sum_probs=34.8
Q ss_pred CCCCCHHHHHHHhhhccCC-CCCCCCcchHHHHHHHHHHHHhc
Q 028981 97 KAEMSIWECCELLNEVVDE-SDPDLDEPQIQHLLQSAEAIRKD 138 (201)
Q Consensus 97 ~~~MtI~EAle~Ln~lvDe-SDPD~dlpqi~H~lQTAEaIR~d 138 (201)
...+|..+|++.|.++|.. .+++++|.++.-+++-|-.+-+.
T Consensus 4 ~k~~sfEeal~~LEeIV~~LE~~~l~Lees~~lyeeG~~L~k~ 46 (80)
T PRK14067 4 KKTADFEQQLARLQEIVDALEGGDLPLEESVALYKEGLGLARA 46 (80)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Confidence 4579999999999999977 78899999999988877655443
No 51
>COG3481 Predicted HD-superfamily hydrolase [General function prediction only]
Probab=33.99 E-value=19 Score=33.17 Aligned_cols=49 Identities=31% Similarity=0.528 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhcCCCC--CceeeeeeeecccceecccCCCC-CCCceeecCcee
Q 028981 127 HLLQSAEAIRKDYPDE--DWLHLTALIHDLGKVLTLPKFGG-LPQWAVVGDTFP 177 (201)
Q Consensus 127 H~lQTAEaIR~d~p~p--DW~qLtGLIHDLGKvl~~~~fg~-epQWavvGDTfp 177 (201)
-+++.|.+|-+-+|.- |=++..+++||+||++-+ -+. ...|.+-|+-.+
T Consensus 148 ~~~~l~~~~~~~y~~~n~dli~Ag~ilHdigK~~el--~~~~~~~yt~~g~lig 199 (287)
T COG3481 148 TVLELYKRISEIYPTVNRELIYAGAILHDIGKVLEL--TGPEATEYTVRGNLIG 199 (287)
T ss_pred HHHHHHHHHHhhcccccHHHHHHHHHHhcccccccC--CCcccccceeccceeE
Confidence 3556666666656533 667889999999999976 232 347888887543
No 52
>PF04752 ChaC: ChaC-like protein; InterPro: IPR006840 The ChaC protein is thought to be associated with the putative ChaA Ca2+/H+ cation transport protein in Escherichia coli. Its function is not known. This family also includes homologues regions from several other bacterial and eukaryotic proteins.
Probab=32.50 E-value=88 Score=26.45 Aligned_cols=38 Identities=21% Similarity=0.272 Sum_probs=32.1
Q ss_pred CCCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCC
Q 028981 98 AEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYP 140 (201)
Q Consensus 98 ~~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~p 140 (201)
+..++.+....+-+-...|.| |.+.+++||+++|+-+|
T Consensus 124 g~~~~~~~A~~Ia~a~G~~G~-----N~eYL~~l~~~L~~~gp 161 (178)
T PF04752_consen 124 GPLPLEEIARIIATASGPSGS-----NREYLFNLAEALRELGP 161 (178)
T ss_pred CCCCHHHHHHHHhheECcCcC-----CHHHHHHHHHHHHHhCC
Confidence 367888888888887777775 78899999999999986
No 53
>PF07514 TraI_2: Putative helicase; InterPro: IPR011119 The members of this family are restricted to the proteobacteria. Some members have been annotated as helicase, conjugative relaxase or nickase. The majority contain an HD domain, which is found in a superfamily of enzymes with a predicted or known phosphohydrolase activity. These enzymes appear to be involved in the nucleic acid metabolism, signal transduction and possibly other functions in bacteria.
Probab=30.52 E-value=11 Score=34.42 Aligned_cols=60 Identities=32% Similarity=0.484 Sum_probs=33.0
Q ss_pred chHHHHHHHHH-HHHhcC----C-----------CCCce---eeeeeeecccceecc---cCCCCCCCceeecCceeecc
Q 028981 123 PQIQHLLQSAE-AIRKDY----P-----------DEDWL---HLTALIHDLGKVLTL---PKFGGLPQWAVVGDTFPLGC 180 (201)
Q Consensus 123 pqi~H~lQTAE-aIR~d~----p-----------~pDW~---qLtGLIHDLGKvl~~---~~fg~epQWavvGDTfpVGC 180 (201)
..+.|.|++|. |+|-.. | .+.|- =++||+|||||++.- ....|. +|.-......-.+
T Consensus 66 Gll~h~LEva~~Alrl~~~~~lp~~a~pEe~~~q~~~W~~avf~AALlhdlgk~l~d~~v~~~~G~-~W~P~~~~l~~~~ 144 (327)
T PF07514_consen 66 GLLDHTLEVAAYALRLRQGYMLPPGATPEEQAAQEPAWRYAVFYAALLHDLGKPLTDIEVELRDGS-RWNPWHGSLSQWY 144 (327)
T ss_pred cHHHHHHHHHHHHHHHhcCeecCCCCChhhHHHHHhhhHHHHHHHHHHhccCcceeEEEEEECCCC-EecCCCCCccHHH
Confidence 45777777764 333321 1 34664 368999999996643 112333 6654444444444
Q ss_pred cCC
Q 028981 181 AFD 183 (201)
Q Consensus 181 ~f~ 183 (201)
+|-
T Consensus 145 ~~~ 147 (327)
T PF07514_consen 145 RFR 147 (327)
T ss_pred HhC
Confidence 443
No 54
>PF14475 Mso1_Sec1_bdg: Sec1-binding region of Mso1
Probab=30.49 E-value=89 Score=21.34 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=19.1
Q ss_pred cCCCCCCCCcchHHHHHHHHHHHHhcCCCCCce
Q 028981 113 VDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWL 145 (201)
Q Consensus 113 vDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~ 145 (201)
-.|+|+|++-+-..|=.--|=..-+--|-|+|+
T Consensus 9 ~~E~DGdteddT~v~r~l~~yY~~k~~~~P~WL 41 (41)
T PF14475_consen 9 SSESDGDTEDDTHVHRVLRKYYTEKGRPFPGWL 41 (41)
T ss_pred ccccCCCCcchhHHHHHHHHHHHHcCCCCCCcC
Confidence 478999888444444322233333344788996
No 55
>PF10809 DUF2732: Protein of unknown function (DUF2732); InterPro: IPR020126 This entry represents a group of proteins with no known function
Probab=30.45 E-value=1.8e+02 Score=22.04 Aligned_cols=62 Identities=15% Similarity=0.191 Sum_probs=43.9
Q ss_pred CccccccCCccchhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCHHHHHHHhhh
Q 028981 50 NSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNE 111 (201)
Q Consensus 50 ~~~~~~FR~Y~~~~~~~~~V~~fYr~~H~~QTvdFv~~~r~~~~~~~~~~MtI~EAle~Ln~ 111 (201)
|.+...+....++.....-+.+.=.+-++.|...|..+..+==......+||--||+|||..
T Consensus 3 n~e~~~~~~~~d~~~l~~lL~~AR~eeRk~~A~~~S~RL~~LA~hi~~~~ls~~E~~ELLrq 64 (77)
T PF10809_consen 3 NTETRSMKTGADAASLNELLNKARMEERKDRADAFSSRLDALAAHIANEELSAVEAAELLRQ 64 (77)
T ss_pred cchhccccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHH
Confidence 33444455554332344566777788899999999887776666666789999999999973
No 56
>TIGR01616 nitro_assoc nitrogenase-associated protein. This model describes a small family of uncharacterized proteins found so far in alpha and gamma proteobacteria and in Nostoc sp. PCC 7120, a cyanobacterium. The gene for this protein is associated with nitrogenase genes. This family shows sequence similarity to TIGR00014, a glutaredoxin-dependent arsenate reductase that converts arsentate to arsenite for disposal. This family is one of several included in Pfam model pfam03960.
Probab=29.80 E-value=88 Score=24.91 Aligned_cols=54 Identities=6% Similarity=0.059 Sum_probs=38.2
Q ss_pred ccCCccchhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHhcCC--CCCCCHHHHHHHhhh
Q 028981 55 TFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLD--KAEMSIWECCELLNE 111 (201)
Q Consensus 55 ~FR~Y~~~~~~~~~V~~fYr~~H~~QTvdFv~~~r~~~~~~~--~~~MtI~EAle~Ln~ 111 (201)
+||||-......+.++...... -.-+.+.+.-..|.+++ ...||.-||+++|-+
T Consensus 29 ~~~d~~~~p~t~~eL~~~l~~~---g~~~lin~~~~~~r~l~~~~~~ls~~e~i~lm~~ 84 (126)
T TIGR01616 29 EVQDILKEPWHADTLRPYFGNK---PVGSWFNRAAPRVKSGEVNPDSIDEASALALMVS 84 (126)
T ss_pred EEEeccCCCcCHHHHHHHHHHc---CHHHHHhccchHhhhCCCCcccCCHHHHHHHHHh
Confidence 6999987555556788877764 35677777777886654 446888888887764
No 57
>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]
Probab=29.79 E-value=58 Score=29.82 Aligned_cols=60 Identities=18% Similarity=0.229 Sum_probs=43.5
Q ss_pred hhHHHHHHHHHHHHhcCC--CCCCCHHHHHHHhh-----hccCCCCCCCCcchHHHHHHHHHHHHhcC
Q 028981 79 NQTYDFVKKMREEYAKLD--KAEMSIWECCELLN-----EVVDESDPDLDEPQIQHLLQSAEAIRKDY 139 (201)
Q Consensus 79 ~QTvdFv~~~r~~~~~~~--~~~MtI~EAle~Ln-----~lvDeSDPD~dlpqi~H~lQTAEaIR~d~ 139 (201)
.+||+.|.. ++=|-+|+ .++||.|||++.+. .++=.||-+.-.+.+--.=.||=.+++.|
T Consensus 167 ~etv~~vld-~e~~vGlTvqPgKlt~~eAveIV~ey~~~r~ilnSD~~s~~sd~lavprtal~m~~~g 233 (254)
T COG1099 167 EETVDEVLD-EEFYVGLTVQPGKLTVEEAVEIVREYGAERIILNSDAGSAASDPLAVPRTALEMEERG 233 (254)
T ss_pred HHHHHHHHh-ccceEEEEecCCcCCHHHHHHHHHHhCcceEEEecccccccccchhhhHHHHHHHHhc
Confidence 478887774 55666655 78999999999996 45556777766667766667776666544
No 58
>COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism]
Probab=29.29 E-value=60 Score=28.57 Aligned_cols=35 Identities=29% Similarity=0.354 Sum_probs=26.3
Q ss_pred ccCCCCC-----CCCcchHHHHHHHHHHHHhcCCCCCceeeeeee
Q 028981 112 VVDESDP-----DLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALI 151 (201)
Q Consensus 112 lvDeSDP-----D~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLI 151 (201)
..+...| -+.|.-|.|++-|+|+||.++ +-|.|+|
T Consensus 132 ~~~~~lpvILV~~~~LGtINHtlLt~eal~~~g-----l~l~G~I 171 (223)
T COG0132 132 AVQLQLPVILVVGIKLGTINHTLLTVEALRARG-----LPLAGWV 171 (223)
T ss_pred HHHcCCCEEEEecCCccHHHHHHHHHHHHHHCC-----CCEEEEE
Confidence 3345566 456889999999999999998 3366665
No 59
>PRK10119 putative hydrolase; Provisional
Probab=29.04 E-value=34 Score=30.16 Aligned_cols=45 Identities=16% Similarity=0.140 Sum_probs=35.0
Q ss_pred ccCCCCCCCCcchHHHHHHHHHHHHhc-CCCCCceeeeeeeecccc
Q 028981 112 VVDESDPDLDEPQIQHLLQSAEAIRKD-YPDEDWLHLTALIHDLGK 156 (201)
Q Consensus 112 lvDeSDPD~dlpqi~H~lQTAEaIR~d-~p~pDW~qLtGLIHDLGK 156 (201)
.....||-=|+.-+....++|..|-+. +.+..-+.+++|+||+|-
T Consensus 17 ~l~~~~~~HD~~Hi~RV~~lA~~Ia~~e~~D~~vv~lAAlLHDv~d 62 (231)
T PRK10119 17 HHQHQDAAHDICHFRRVWATAQKLAADDDVDMLVVLTACYFHDIVS 62 (231)
T ss_pred HhhcCCCccChHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhhcch
Confidence 334457777888899989999888544 447778899999999985
No 60
>COG1078 HD superfamily phosphohydrolases [General function prediction only]
Probab=28.24 E-value=13 Score=35.46 Aligned_cols=16 Identities=38% Similarity=0.563 Sum_probs=12.6
Q ss_pred eeeeeeeecccceecc
Q 028981 145 LHLTALIHDLGKVLTL 160 (201)
Q Consensus 145 ~qLtGLIHDLGKvl~~ 160 (201)
.+++||+||+|.--+-
T Consensus 86 ~~~AALLHDIGHgPFS 101 (421)
T COG1078 86 VRLAALLHDIGHGPFS 101 (421)
T ss_pred HHHHHHHHccCCCccc
Confidence 5678999999987643
No 61
>COG0502 BioB Biotin synthase and related enzymes [Coenzyme metabolism]
Probab=27.56 E-value=1.4e+02 Score=28.06 Aligned_cols=44 Identities=30% Similarity=0.444 Sum_probs=35.0
Q ss_pred CCCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 028981 98 AEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIH 152 (201)
Q Consensus 98 ~~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIH 152 (201)
...|..||+.+++ -|+.+ .-+++.|..+|+.| ++.=.||.++||
T Consensus 12 ~~~~~~e~~~l~~------~~~~~----~~L~~aA~~~R~~~-~g~~V~l~~ii~ 55 (335)
T COG0502 12 ERWTLDEALALLD------LPDED----ELLFEAAQKHRLHF-DGNEVQLSTLIS 55 (335)
T ss_pred CCcCHHHHHHHHc------CCcch----HHHHHHHHHHHHhc-CCCeEEEEEEEE
Confidence 5678888888876 23322 46899999999999 788899999987
No 62
>PRK13298 tRNA CCA-pyrophosphorylase; Provisional
Probab=27.49 E-value=35 Score=32.69 Aligned_cols=36 Identities=17% Similarity=0.105 Sum_probs=24.4
Q ss_pred chHHHHHHHHHHHHhcCCCCCceeeeeeeecccceec
Q 028981 123 PQIQHLLQSAEAIRKDYPDEDWLHLTALIHDLGKVLT 159 (201)
Q Consensus 123 pqi~H~lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl~ 159 (201)
+...|.+.+-..+.+.- .+-++-+++|+||+||-..
T Consensus 228 d~~~htl~~l~~~~~~~-~~l~lR~AaLlHDiGK~~t 263 (417)
T PRK13298 228 NLGNYILMGLSKISKLT-KDIDIRFSYLCQFLGSMIP 263 (417)
T ss_pred hHHHHHHHHHHHHHhcC-CCHHHHHHHHHhhhcCCCC
Confidence 44567666655555443 3446788999999999753
No 63
>PF00845 Gemini_BL1: Geminivirus BL1 movement protein; InterPro: IPR000211 The movement of bipartite Geminiviruses such as squash leaf curl virus (SqLCV) requires the cooperative interaction of two essential virus-encoded movement proteins, BR1 and BL1. Recent studies of SqLCV and bean dwarf mosaic virus have shown that BR1 and BL1 act in a cooperative manner to move the viral genome intracellularly from the nucleus to the cytoplasm and across the wall cell to cell. BR1 is a nuclear shuttle protein, and it has been proposed to bind newly replicated viral ssDNA genomes and move these between the nucleus and cytoplasm. These BR1-genome complexes are then directed to the cell periphery through interactions between BR1 and BL1, where, as the result of BL1 action, the complexes are moved to adjacent uninfected cells. The precise mechanism by which BL1 acts to transport these genome complexes across the cell wall, and whether this may differ in different cell types, remains at issue [].; GO: 0003677 DNA binding, 0046740 spread of virus in host, cell to cell, 0033644 host cell membrane
Probab=26.95 E-value=21 Score=32.89 Aligned_cols=17 Identities=41% Similarity=0.657 Sum_probs=13.6
Q ss_pred ceeecccCCCCccccccchhhh
Q 028981 175 TFPLGCAFDESNVHHKVSIFSF 196 (201)
Q Consensus 175 TfpVGC~f~~siV~~e~~~~tF 196 (201)
|||+||-.+-. ||++||
T Consensus 80 TfPI~CNidLH-----YfSSSf 96 (276)
T PF00845_consen 80 TFPIRCNIDLH-----YFSSSF 96 (276)
T ss_pred EeeeeeeeeeE-----Eeeecc
Confidence 89999987654 777776
No 64
>COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms]
Probab=25.94 E-value=1e+02 Score=29.49 Aligned_cols=52 Identities=27% Similarity=0.259 Sum_probs=33.3
Q ss_pred HHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHh---cCC----CCCceeeeeeeeccccee
Q 028981 103 WECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRK---DYP----DEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 103 ~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~---d~p----~pDW~qLtGLIHDLGKvl 158 (201)
.+.++-|..++..-|+.+ -.|+..+|..++. ... .-+=++++|.+||+|||-
T Consensus 169 ~~t~~~L~~~~E~R~~et----g~H~~Rv~~~~~~lAe~lgLse~~v~~i~~AapLHDIGKva 227 (360)
T COG3437 169 DETLEELAALLEVRDYET----GDHLERVAQYSELLAELLGLSEEEVDLIKKAAPLHDIGKVA 227 (360)
T ss_pred HHHHHHHHHHHHhcccch----hhHHHHHHHHHHHHHHHhCCCHHHHHHHHhccchhhccccc
Confidence 378888888885555554 4555554443332 221 125678899999999986
No 65
>PRK00977 exodeoxyribonuclease VII small subunit; Provisional
Probab=25.14 E-value=1e+02 Score=22.99 Aligned_cols=42 Identities=19% Similarity=0.209 Sum_probs=34.0
Q ss_pred CCCCCCHHHHHHHhhhccCC-CCCCCCcchHHHHHHHHHHHHh
Q 028981 96 DKAEMSIWECCELLNEVVDE-SDPDLDEPQIQHLLQSAEAIRK 137 (201)
Q Consensus 96 ~~~~MtI~EAle~Ln~lvDe-SDPD~dlpqi~H~lQTAEaIR~ 137 (201)
...++|..+|++.|.++|.. -+++++|..+..+++-|-.+-+
T Consensus 6 ~~~~~sfEea~~~LEeIv~~LE~~~l~Lees~~lyeeg~~L~k 48 (80)
T PRK00977 6 KSKPLSFEEALAELEEIVTRLESGDLPLEESLAAFERGVALAR 48 (80)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Confidence 45679999999999999976 6689999998888877655443
No 66
>COG1639 Predicted signal transduction protein [Signal transduction mechanisms]
Probab=25.05 E-value=16 Score=33.55 Aligned_cols=76 Identities=20% Similarity=0.188 Sum_probs=47.5
Q ss_pred HHHHHHHhcCCCCCCCHHHHHHHhh-----hcc-------CCCCCCCCcchHH----HHHHHHHHH----HhcC-CCCCc
Q 028981 86 KKMREEYAKLDKAEMSIWECCELLN-----EVV-------DESDPDLDEPQIQ----HLLQSAEAI----RKDY-PDEDW 144 (201)
Q Consensus 86 ~~~r~~~~~~~~~~MtI~EAle~Ln-----~lv-------DeSDPD~dlpqi~----H~lQTAEaI----R~d~-p~pDW 144 (201)
+-.-.-|.++.+.--||-||+..|= +|| --+.|+..--+.. +++-||-.+ |.-+ ++++=
T Consensus 63 ~lANS~yfg~~~~i~tl~~Ai~rLG~~~v~NLv~a~a~~~~~~~~~~~~~~~~~~w~~a~~~A~ia~~La~~~g~~~~~~ 142 (289)
T COG1639 63 RLANSPYFGFPREITTLNEAIVRLGIGLVINLVLALAEQAIQSVNSSSAEDRQLFWDTAIETAMIAEGLARALGRADSDE 142 (289)
T ss_pred HHhcchhcCCCCccCcHHHHHHHHhHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCcccHHH
Confidence 3344557788888899999987553 222 1133332222333 444444332 3444 67788
Q ss_pred eeeeeeeecccceeccc
Q 028981 145 LHLTALIHDLGKVLTLP 161 (201)
Q Consensus 145 ~qLtGLIHDLGKvl~~~ 161 (201)
.-++||+|.+|+++++.
T Consensus 143 ~y~~gLLh~lG~l~ll~ 159 (289)
T COG1639 143 AYTAGLLHNLGILVLLT 159 (289)
T ss_pred HHHHHHHHHccHHHHHH
Confidence 88999999999999883
No 67
>PRK09240 thiH thiamine biosynthesis protein ThiH; Reviewed
Probab=24.22 E-value=1.5e+02 Score=27.32 Aligned_cols=46 Identities=17% Similarity=0.268 Sum_probs=34.9
Q ss_pred CCCCHHHHHHHhhhccCCCCCCCCcchHHHHHHHHHHHHhcCCCCCceeeeeeee
Q 028981 98 AEMSIWECCELLNEVVDESDPDLDEPQIQHLLQSAEAIRKDYPDEDWLHLTALIH 152 (201)
Q Consensus 98 ~~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~lQTAEaIR~d~p~pDW~qLtGLIH 152 (201)
..+|..||+.+|+. + +-+.+.-+++.|..||+++ .-+=+.|...|+
T Consensus 34 ~~ls~ee~~~Ll~~----~----~~~~l~~L~~~A~~ir~~~-~G~~v~l~~~in 79 (371)
T PRK09240 34 DRLSLEDLMALLSP----A----AEPYLEEMAQKAQRLTRQR-FGNTISLYTPLY 79 (371)
T ss_pred CCCCHHHHHHHhCC----C----ChhHHHHHHHHHHHHHHHH-cCCEEEEEeceE
Confidence 58999999999863 1 1335777899999999997 456677766665
No 68
>cd03381 PAP2_glucose_6_phosphatase PAP2_like proteins, glucose-6-phosphatase subfamily. Glucose-6-phosphatase converts glucose-6-phosphate into free glucose and is active in the lumen of the endoplasmic reticulum, where it is bound to the membrane. The generation of free glucose is an important control point in metabolism, and stands at the end of gluconeogenesis and the release of glucose from glycogen. Deficiency of glucose-6-phosphatase leads to von Gierke's disease.
Probab=24.01 E-value=21 Score=31.49 Aligned_cols=32 Identities=34% Similarity=0.583 Sum_probs=27.1
Q ss_pred HHHHHHHHhcCCCCCceee-----eeeeecccceecc
Q 028981 129 LQSAEAIRKDYPDEDWLHL-----TALIHDLGKVLTL 160 (201)
Q Consensus 129 lQTAEaIR~d~p~pDW~qL-----tGLIHDLGKvl~~ 160 (201)
+.|.|...|-.++|+|+|+ .+|+.|+|-+|.+
T Consensus 190 ~ws~~~a~kwc~~p~~~~~~ttp~~~l~r~~g~l~gl 226 (235)
T cd03381 190 LWSLEKAFKWCERPEWVHIDTTPFASLLRNLGTLLGL 226 (235)
T ss_pred hhhHHHHHhccCCCceECCCCchHHHHHHHhhhHHHH
Confidence 4577888888899999997 5899999999866
No 69
>PF11884 DUF3404: Domain of unknown function (DUF3404); InterPro: IPR021821 This domain is functionally uncharacterised. This domain is found in bacteria. This presumed domain is about 260 amino acids in length. This domain is found associated with PF02518 from PFAM, PF00512 from PFAM.
Probab=23.88 E-value=31 Score=31.48 Aligned_cols=81 Identities=23% Similarity=0.360 Sum_probs=52.4
Q ss_pred hhhHHHHHHHHHHhhhhHH-HHHHHHHH-HHhcCCCCCCCHHHHHHHhhhccCCCCCCCC---cchHHHHHHHHHHHHhc
Q 028981 64 ERQKSVEEFYRLQHINQTY-DFVKKMRE-EYAKLDKAEMSIWECCELLNEVVDESDPDLD---EPQIQHLLQSAEAIRKD 138 (201)
Q Consensus 64 ~~~~~V~~fYr~~H~~QTv-dFv~~~r~-~~~~~~~~~MtI~EAle~Ln~lvDeSDPD~d---lpqi~H~lQTAEaIR~d 138 (201)
..++|...||++--..+.+ -|-.+.-. +|.+- +| +-|.--|+++ +-.|+-+.|+|+-++..
T Consensus 11 sLper~~~f~~~~~~~~~~~~~~~~~lq~~YP~~------------LL--~p~S~yPq~~~yp~~diq~Ly~~~~~C~~~ 76 (262)
T PF11884_consen 11 SLPERWQAFYQLFWQSSAIASYDIRELQSQYPTR------------LL--TPDSMYPQFSQYPWQDIQQLYQLAQTCQGP 76 (262)
T ss_pred HhHHHHHHHHHHHhhhCcccccCHHHHHhhCChh------------hc--CccccCCCcccCCHHHHHHHHHHHhhcCCC
Confidence 3567888999988665533 33222222 55431 00 0122346665 67788889998888776
Q ss_pred CC---------------------CCCceeeeeeeeccccee
Q 028981 139 YP---------------------DEDWLHLTALIHDLGKVL 158 (201)
Q Consensus 139 ~p---------------------~pDW~qLtGLIHDLGKvl 158 (201)
-| .+.||.=.|+||..|.-.
T Consensus 77 ~p~sP~ite~l~FerAlC~g~~L~~~WFar~~~iHP~GGSY 117 (262)
T PF11884_consen 77 LPLSPLITEPLVFERALCQGTALPPRWFARSGLIHPGGGSY 117 (262)
T ss_pred CCCCcccccchHHHHHHhCCCCCChHHHHhCCCcCCCCCcH
Confidence 54 568999999999998644
No 70
>cd03035 ArsC_Yffb Arsenate Reductase (ArsC) family, Yffb subfamily; Yffb is an uncharacterized bacterial protein encoded by the yffb gene, related to the thioredoxin-fold arsenic reductases, ArsC. The structure of Yffb and the conservation of the catalytic cysteine suggest that it is likely to function as a glutathione (GSH)-dependent thiol reductase. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from GSH via glutaredoxin, through a single catalytic cysteine.
Probab=23.48 E-value=1e+02 Score=23.44 Aligned_cols=53 Identities=21% Similarity=0.285 Sum_probs=37.7
Q ss_pred ccCCccchhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHhcCCC---CCCCHHHHHHHhh
Q 028981 55 TFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDK---AEMSIWECCELLN 110 (201)
Q Consensus 55 ~FR~Y~~~~~~~~~V~~fYr~~H~~QTvdFv~~~r~~~~~~~~---~~MtI~EAle~Ln 110 (201)
+||||.......+.++...+..- +-+.+.+.-..|.+++. ..||..|++++|-
T Consensus 27 ~~~di~~~p~s~~eL~~~l~~~g---~~~li~~~~~~yk~l~l~~~~~~s~~e~~~~l~ 82 (105)
T cd03035 27 TFHDYRKDGLDAATLERWLAKVG---WETLLNKRGTTWRKLDDAQKAALDAAKAIALML 82 (105)
T ss_pred EEEecccCCCCHHHHHHHHHHhC---hHHHHccCchHHHhCChhhhccCCHHHHHHHHH
Confidence 68999875555566777776543 67778877788877653 3588888888775
No 71
>cd01282 HTH_MerR-like_sg3 Helix-Turn-Helix DNA binding domain of putative transcription regulators from the MerR superfamily. Putative helix-turn-helix (HTH) MerR-like transcription regulators (subgroup 3). Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.
Probab=23.41 E-value=3.4e+02 Score=20.66 Aligned_cols=64 Identities=20% Similarity=0.348 Sum_probs=33.8
Q ss_pred CCCCCCCcCccccccCCccchhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHhcCCCCCCCHHHHHHHhhhccCCCCCCCC
Q 028981 42 DGFVAPEINSFGKTFRDYNAECERQKSVEEFYRLQHINQTYDFVKKMREEYAKLDKAEMSIWECCELLNEVVDESDPDLD 121 (201)
Q Consensus 42 ~~f~~p~~~~~~~~FR~Y~~~~~~~~~V~~fYr~~H~~QTvdFv~~~r~~~~~~~~~~MtI~EAle~Ln~lvDeSDPD~d 121 (201)
.|..+|.- ....+|.|+. .+ |. ++.+++..| ...||+.|.-++|+......++...
T Consensus 23 ~GLl~p~r--~~~g~R~Y~~-~~----~~----------~l~~I~~lr-------~~G~sl~eI~~~l~~~~~~~~~~~~ 78 (112)
T cd01282 23 QGLLVPER--SANGYRDYDE-AA----VD----------RVRQIRRLL-------AAGLTLEEIREFLPCLRGGEPTFRP 78 (112)
T ss_pred CCCCCCCc--CCCCCeecCH-HH----HH----------HHHHHHHHH-------HcCCCHHHHHHHHHHhhCCCccCCc
Confidence 35777753 3457999984 22 22 223333332 2357888887777754443333334
Q ss_pred cchHHHHH
Q 028981 122 EPQIQHLL 129 (201)
Q Consensus 122 lpqi~H~l 129 (201)
.+.+..+|
T Consensus 79 ~~~~~~~l 86 (112)
T cd01282 79 CPDLLAVL 86 (112)
T ss_pred cHHHHHHH
Confidence 44554444
No 72
>KOG2155 consensus Tubulin-tyrosine ligase-related protein [Posttranslational modification, protein turnover, chaperones]
Probab=22.78 E-value=46 Score=33.41 Aligned_cols=23 Identities=39% Similarity=0.665 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHhcCCCCCceeeee
Q 028981 125 IQHLLQSAEAIRKDYPDEDWLHLTA 149 (201)
Q Consensus 125 i~H~lQTAEaIR~d~p~pDW~qLtG 149 (201)
..|+| |+-+|+++..++|+|+|=
T Consensus 368 vKd~L--A~~a~r~~g~~~Wlq~Ty 390 (631)
T KOG2155|consen 368 VKDLL--AACAMRDPGKNDWLQLTY 390 (631)
T ss_pred HHHHH--HHHHhhcCCCCccccccc
Confidence 34554 888899988899999984
No 73
>PRK14069 exodeoxyribonuclease VII small subunit; Provisional
Probab=22.52 E-value=1.1e+02 Score=24.05 Aligned_cols=41 Identities=10% Similarity=0.188 Sum_probs=34.2
Q ss_pred CCCCHHHHHHHhhhccCC-CCCCCCcchHHHHHHHHHHHHhc
Q 028981 98 AEMSIWECCELLNEVVDE-SDPDLDEPQIQHLLQSAEAIRKD 138 (201)
Q Consensus 98 ~~MtI~EAle~Ln~lvDe-SDPD~dlpqi~H~lQTAEaIR~d 138 (201)
.+||..+|+..|+++|.. .++|++|..+.-+++-|-++-+.
T Consensus 6 ~~~sFEeal~~LEeIV~~LEsgdl~LEesl~lyeeGv~L~k~ 47 (95)
T PRK14069 6 SKISFEDALRELEQIAEKLERQDFSLEESLKAYERGMELKKI 47 (95)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Confidence 479999999999999966 67888998888888877666554
No 74
>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]
Probab=22.37 E-value=82 Score=29.41 Aligned_cols=61 Identities=26% Similarity=0.363 Sum_probs=45.0
Q ss_pred CCCHHHHHHHhhhccCCCCCCCCcchHHHH------------HHHHHHHHhcCCCCCceeeeeeeecccceecccCCCCC
Q 028981 99 EMSIWECCELLNEVVDESDPDLDEPQIQHL------------LQSAEAIRKDYPDEDWLHLTALIHDLGKVLTLPKFGGL 166 (201)
Q Consensus 99 ~MtI~EAle~Ln~lvDeSDPD~dlpqi~H~------------lQTAEaIR~d~p~pDW~qLtGLIHDLGKvl~~~~fg~e 166 (201)
+..+|+|+-.=-+|+-+|.=|.|++++--. =-||||.|++ | |-=|+.|-+||-| |
T Consensus 179 EYGmM~a~aEGfelL~~s~fD~D~~~VA~vW~hGSVIrSWLldLt~~Af~~d-~--~L~q~~g~v~dSG----------E 245 (300)
T COG1023 179 EYGMMQAIAEGFELLKNSPFDYDLEAVAEVWNHGSVIRSWLLDLTAEAFKKD-P--DLDQISGRVSDSG----------E 245 (300)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhCcchHHHHHHHHHHHHHhhC-C--CHHHhcCeeccCC----------C
Confidence 456777776666777788899999987543 3589999998 3 6668888888754 6
Q ss_pred CCceee
Q 028981 167 PQWAVV 172 (201)
Q Consensus 167 pQWavv 172 (201)
+.|+|-
T Consensus 246 GrWTv~ 251 (300)
T COG1023 246 GRWTVE 251 (300)
T ss_pred ceeehH
Confidence 678764
No 75
>TIGR01280 xseB exodeoxyribonuclease VII, small subunit. This protein is the small subunit for exodeoxyribonuclease VII. Exodeoxyribonuclease VII is made of a complex of four small subunits to one large subunit. The complex degrades single-stranded DNA into large acid-insoluble oligonucleotides. These nucleotides are then degraded further into acid-soluble oligonucleotides.
Probab=22.29 E-value=1.1e+02 Score=22.10 Aligned_cols=36 Identities=22% Similarity=0.305 Sum_probs=28.1
Q ss_pred CCHHHHHHHhhhccCC-CCCCCCcchHHHHHHHHHHH
Q 028981 100 MSIWECCELLNEVVDE-SDPDLDEPQIQHLLQSAEAI 135 (201)
Q Consensus 100 MtI~EAle~Ln~lvDe-SDPD~dlpqi~H~lQTAEaI 135 (201)
||..+|+..|.++|-. .+++++|..+.-+++-|-.+
T Consensus 1 ~sfEe~l~~Le~Iv~~LE~~~l~Leesl~lyeeG~~L 37 (67)
T TIGR01280 1 LSFEEALSELEQIVQKLESGDLALEEALNLFERGMAL 37 (67)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 7889999999999965 67888888877777655443
No 76
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=22.15 E-value=30 Score=28.21 Aligned_cols=16 Identities=38% Similarity=0.499 Sum_probs=9.4
Q ss_pred CCCCHHHHHHHhhhccCC
Q 028981 98 AEMSIWECCELLNEVVDE 115 (201)
Q Consensus 98 ~~MtI~EAle~Ln~lvDe 115 (201)
..||+.||+..|| |++
T Consensus 53 ~~Mtl~EA~~ILn--v~~ 68 (127)
T PF03656_consen 53 KGMTLDEARQILN--VKE 68 (127)
T ss_dssp ----HHHHHHHHT----G
T ss_pred CCCCHHHHHHHcC--CCC
Confidence 4799999999999 555
No 77
>PRK14065 exodeoxyribonuclease VII small subunit; Provisional
Probab=21.63 E-value=1e+02 Score=24.13 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=33.2
Q ss_pred CCCCCCCHHHHHHHhhhccCC-CCCCCCcchHHHHHHHHHH
Q 028981 95 LDKAEMSIWECCELLNEVVDE-SDPDLDEPQIQHLLQSAEA 134 (201)
Q Consensus 95 ~~~~~MtI~EAle~Ln~lvDe-SDPD~dlpqi~H~lQTAEa 134 (201)
.+-.+++-.+.++.++++++. +||+++|..+.-++..|-.
T Consensus 20 kn~ek~sFE~klerakeiLe~LndpeisL~eSvkLYkeG~~ 60 (86)
T PRK14065 20 KNAPKKSFEEHVHSLEQAIDRLNDPNLSLKDGMDLYKTAMQ 60 (86)
T ss_pred cccccccHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHH
Confidence 344589999999999999977 9999999999888776543
No 78
>PTZ00059 dynein light chain; Provisional
Probab=21.36 E-value=46 Score=24.99 Aligned_cols=8 Identities=38% Similarity=0.746 Sum_probs=5.8
Q ss_pred HHHHHhcC
Q 028981 132 AEAIRKDY 139 (201)
Q Consensus 132 AEaIR~d~ 139 (201)
|+.|++..
T Consensus 40 A~~IK~~f 47 (90)
T PTZ00059 40 AAYIKKEF 47 (90)
T ss_pred HHHHHHHH
Confidence 77777765
No 79
>PF00010 HLH: Helix-loop-helix DNA-binding domain only nuclear translocator protein (Arnt).; InterPro: IPR011598 The helix-loop-helix (HLH) DNA-binding domain consists of a closed bundle of four helices in a left-handed twist with two crossover connections. The HLH domain directs dimerisation, and is juxtaposed to basic regions to create a DNA interaction interface surface that recognises specific DNA sequences. Basic region/HLH (bHLH) proteins regulate diverse biological pathways []. bHLH proteins include MyoD [], SREBPs (sterol regulatory element binding proteins) [], and yeast Pho4 (phosphatase system) []. In certain proteins the bHLH domain contains a leucine-zipper motif. The bHLH/leucine zipper (bHLHZip) domain specifies dimerisation within a network of proteins and determines sequence-specific DNA binding []. bHLHZip domains occur in the transcription factors Myc, Mad, Max and Usf [, ]. This entry is bHLHZip, which covers the bHLH domain and the leucine zipper motif, when present.; PDB: 1NLW_A 1NKP_D 1A93_A 2A93_A 1AM9_C 3U5V_A 1A0A_B 2QL2_C 1UKL_C 1AN4_B ....
Probab=20.98 E-value=2.2e+02 Score=18.69 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=30.8
Q ss_pred CCHHHHHHHhhhccCCC--CCCCCcchHHHHHHHHHHHHh
Q 028981 100 MSIWECCELLNEVVDES--DPDLDEPQIQHLLQSAEAIRK 137 (201)
Q Consensus 100 MtI~EAle~Ln~lvDeS--DPD~dlpqi~H~lQTAEaIR~ 137 (201)
..|-++++.|.++|-.. ++..-++.+.-|-.|.+.|+.
T Consensus 14 ~~i~~~~~~L~~llp~~~~~~~~k~~K~~iL~~ai~yI~~ 53 (55)
T PF00010_consen 14 DRINDCFDELRELLPSCSAGSSRKLSKASILQKAIDYIKQ 53 (55)
T ss_dssp HHHHHHHHHHHHCCSSHHCCTTSSSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccchhccccccCCHHHHHHHHHHHHHH
Confidence 35778999999999775 466669999999999998874
Done!