BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 028983
         (201 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|1XRI|A Chain A, X-ray Structure Of A Putative Phosphoprotein Phosphatase
           From Arabidopsis Thaliana Gene At1g05000
 pdb|1XRI|B Chain B, X-ray Structure Of A Putative Phosphoprotein Phosphatase
           From Arabidopsis Thaliana Gene At1g05000
 pdb|2Q47|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of A
           Putative Phosphoprotein Phosphatase From Arabidopsis
           Thaliana Gene At1g05000
 pdb|2Q47|B Chain B, Ensemble Refinement Of The Protein Crystal Structure Of A
           Putative Phosphoprotein Phosphatase From Arabidopsis
           Thaliana Gene At1g05000
          Length = 151

 Score =  266 bits (681), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 126/146 (86%), Positives = 134/146 (91%)

Query: 51  LIPPLNFSMVDNGIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLF 110
           LIPPLNFS VDNGIFRSGFPDSANFSFLQTL LRSIIYLCPEPYPE+N +FLKSNGI+LF
Sbjct: 2   LIPPLNFSXVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKSNGIRLF 61

Query: 111 QFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 170
           QF IEG+KEPFVNIP+  IR ALKVLLD +NHPVLIHCKRGKHRTGCLVGCLRKLQKWCL
Sbjct: 62  QFGIEGNKEPFVNIPDHKIRXALKVLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 121

Query: 171 SSVFDEYQRFAAAKARVSDQRGTRIL 196
           +S+FDEYQRFAAAKARVSDQR   I 
Sbjct: 122 TSIFDEYQRFAAAKARVSDQRFXEIF 147


>pdb|1P15|A Chain A, Crystal Structure Of The D2 Domain Of Rptpa
 pdb|1P15|B Chain B, Crystal Structure Of The D2 Domain Of Rptpa
          Length = 253

 Score = 38.9 bits (89), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 10/88 (11%)

Query: 97  ANTEFLKSNGIKLFQFAIEGHKEPFVNIPED------MIREALKVLLDVRNHPVLIHCKR 150
            NT   KS  I+ F F    H  P V IP D      +I    K      NHP+ +HC  
Sbjct: 130 TNTRENKSRQIRQFHF----HGWPEVGIPSDGKGMINIIAAVQKQQQQSGNHPITVHCSA 185

Query: 151 GKHRTGCLVGCLRKLQKWCLSSVFDEYQ 178
           G  RTG        L++     + D +Q
Sbjct: 186 GAGRTGTFCALSTVLERVKAEGILDVFQ 213


>pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor
          Length = 324

 Score = 36.6 bits (83), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 8/135 (5%)

Query: 63  GIFRSGFPDSANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKLFQFAIEGHKEPFV 122
           G++R+   D   F   +      I  LC E + +           ++ Q+  E H  P +
Sbjct: 38  GVYRNNIDDVVRFLDSKHKNHYKIYNLCAERHYDT-----AKFNCRVAQYPFEDHNPPQL 92

Query: 123 NIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAA 182
            + +    +  + L +  NH   IHCK GK RTG ++ C   L +       +    +  
Sbjct: 93  ELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMI-CAYLLHRGKFLKAQEALDFYGE 151

Query: 183 AKARVSDQRGTRILS 197
            + R  D++G  I S
Sbjct: 152 VRTR--DKKGVTIPS 164


>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
 pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
 pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
 pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
 pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
 pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
          Length = 599

 Score = 35.4 bits (80), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 10/78 (12%)

Query: 107 IKLFQFAIEGHKEPFVNIPE------DMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVG 160
           ++ F F    H  P + IP       D+I    K      NHP+ +HC  G  RTG  + 
Sbjct: 482 VRQFHF----HGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSAGAGRTGTFIA 537

Query: 161 CLRKLQKWCLSSVFDEYQ 178
               L++     + D +Q
Sbjct: 538 LSNILERVKAEGLLDVFQ 555



 Score = 26.9 bits (58), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 13/40 (32%), Positives = 19/40 (47%)

Query: 120 PFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           PF  I      + +K L  V   P+++HC  G  RTG  +
Sbjct: 202 PFTPIGMLKFLKKVKTLNPVHAGPIVVHCSAGVGRTGTFI 241


>pdb|4HSE|A Chain A, Crystal Structure Of Clpb Nbd1 In Complex With Guanidinium
           Chloride And Adp
          Length = 397

 Score = 32.0 bits (71), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 94  YPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD-VRNHPVLIHCKRGK 152
           + E+    L+  GI L + A EG  +P +   E+ IR  +++LL   +N+PVLI  + G 
Sbjct: 8   HAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEE-IRRVIQILLRRTKNNPVLI-GEPGV 65

Query: 153 HRTGCLVGCLRKLQK 167
            +T  + G  +++ K
Sbjct: 66  GKTAIVEGLAQRIVK 80


>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
           VACCINIA VIRUS Wr
 pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
           VACCINIA VIRUS Wr
 pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
           VACCINIA VIRUS Wr
 pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
           VACCINIA VIRUS Wr
          Length = 195

 Score = 32.0 bits (71), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 138 DVRNHPVLIHCKRGKHRTGC-LVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL 196
           D RN PVL+HC  G +R+G  ++  L    K  L  ++     F        D RG  + 
Sbjct: 122 DQRNEPVLVHCAAGVNRSGAXILAYLXSKNKESLPXLY-----FLYVYHSXRDLRGAFVE 176

Query: 197 SPALE 201
           +P+ +
Sbjct: 177 NPSFK 181


>pdb|2C46|A Chain A, Crystal Structure Of The Human Rna Guanylyltransferase And
           5'-Phosphatase
 pdb|2C46|B Chain B, Crystal Structure Of The Human Rna Guanylyltransferase And
           5'-Phosphatase
 pdb|2C46|C Chain C, Crystal Structure Of The Human Rna Guanylyltransferase And
           5'-Phosphatase
 pdb|2C46|D Chain D, Crystal Structure Of The Human Rna Guanylyltransferase And
           5'-Phosphatase
          Length = 241

 Score = 32.0 bits (71), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 102 LKSNGIKLFQFAIEGHKE-PFVNIPEDMIREALKVLLDVRNHPVLI--HCKRGKHRTGCL 158
           ++  GIK  +   +GH E P     E  IR  L    + RN P LI  HC  G +RTG L
Sbjct: 101 IEKEGIKYIKLQCKGHGECPTTENTETFIR--LCERFNERNPPELIGVHCTHGFNRTGFL 158

Query: 159 V 159
           +
Sbjct: 159 I 159


>pdb|3AWG|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
           Mutant (248-576)
 pdb|3AWG|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
           Mutant (248-576)
 pdb|3AWG|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp G356a
           Mutant (248-576)
          Length = 334

 Score = 31.6 bits (70), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           +++  I+ H  P +      I +A   +    +H + IHCK GK RTG LV
Sbjct: 82  VYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKAGKGRTGTLV 132


>pdb|3AWF|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
 pdb|3AWF|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
 pdb|3AWF|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (236-576)
          Length = 346

 Score = 31.6 bits (70), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           +++  I+ H  P +      I +A   +    +H + IHCK GK RTG LV
Sbjct: 94  VYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLV 144


>pdb|3V0I|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           256-576, E411f
          Length = 324

 Score = 31.6 bits (70), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           +++  I+ H  P +      I +A   +    +H + IHCK GK RTG LV
Sbjct: 72  VYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLV 122


>pdb|3AWE|A Chain A, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
 pdb|3AWE|B Chain B, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
 pdb|3AWE|C Chain C, Crystal Structure Of Pten-Like Domain Of Ci-Vsp (248-576)
          Length = 334

 Score = 31.6 bits (70), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           +++  I+ H  P +      I +A   +    +H + IHCK GK RTG LV
Sbjct: 82  VYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHCKGGKGRTGTLV 132


>pdb|1QVR|A Chain A, Crystal Structure Analysis Of Clpb
 pdb|1QVR|B Chain B, Crystal Structure Analysis Of Clpb
 pdb|1QVR|C Chain C, Crystal Structure Analysis Of Clpb
          Length = 854

 Score = 31.6 bits (70), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)

Query: 94  YPEANTEFLKSNGIKLFQFAIEGHKEPFVNIPEDMIREALKVLLD-VRNHPVLIHCKRGK 152
           + E+    L+  GI L + A EG  +P +   E+ IR  +++LL   +N+PVLI  + G 
Sbjct: 145 HAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEE-IRRVIQILLRRTKNNPVLIG-EPGV 202

Query: 153 HRTGCLVGCLRKLQK 167
            +T  + G  +++ K
Sbjct: 203 GKTAIVEGLAQRIVK 217


>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
           Phosphatase Tbptp1
 pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
           Phosphatase Tbptp1
          Length = 306

 Score = 31.2 bits (69), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 139 VRNHPVLIHCKRGKHRTGCLVGCLRKL 165
           V   P+L+HC  G  RTG L+G    L
Sbjct: 220 VTTSPILVHCSAGIGRTGTLIGAYAAL 246


>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
           Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
           Target For Chagas' Disease
 pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
           Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
           Target For Chagas' Disease
          Length = 302

 Score = 30.8 bits (68), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 9/50 (18%)

Query: 135 VLLDVRNHP----VLIHCKRGKHRTGCLVG---CLRKLQKWCL--SSVFD 175
           +L +V+N P    V++HC  G  RTG L+G    L  L++  L  ++V+D
Sbjct: 209 LLTNVKNSPTTVPVVVHCSAGIGRTGTLIGAYAALTHLERGTLTDTTVYD 258


>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
           Phosphatase Inhibitors
          Length = 172

 Score = 30.4 bits (67), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 138 DVRNHPVLIHCKRGKHRTGCLV 159
           D RN PVL+HC  G +R+G  +
Sbjct: 101 DQRNEPVLVHCVAGVNRSGAXI 122


>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
           Phosphatase Vh1
 pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
           Dual-Specificity Phosphatase Vh1
          Length = 176

 Score = 30.4 bits (67), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 6/65 (9%)

Query: 138 DVRNHPVLIHCKRGKHRTGCLV-GCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRIL 196
           D RN PVL+H   G +R+G ++   L    K  L  ++     F      + D RG  + 
Sbjct: 105 DQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLY-----FLYVYHSMRDLRGAFVE 159

Query: 197 SPALE 201
           +P+ +
Sbjct: 160 NPSFK 164


>pdb|2PI7|A Chain A, Structure Of The Catalytic Domain Of The Chick Retinal
           Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
           Cryp-2CPTPRO
 pdb|2PI7|B Chain B, Structure Of The Catalytic Domain Of The Chick Retinal
           Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
           Cryp-2CPTPRO
          Length = 312

 Score = 30.4 bits (67), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 7/53 (13%)

Query: 143 PVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAAAKARVSDQRGTRI 195
           P++IHC  G  RTG  +        W L  + D    F      VSD R  R+
Sbjct: 227 PMIIHCSAGVGRTGTFIAL-----DWLLQHIRD--HEFVDILGLVSDMRSYRM 272


>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
           Drosophila Melanogaster
 pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
           Drosophila Melanogaster
 pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
           Drosophila Melanogaster With A Small Molecule Inhibitor
           Vanadate
 pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
           Drosophila Melanogaster With A Small Molecule Inhibitor
           Vanadate
 pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
           Drosophila Melanogaster With A Phosphopeptide Substrate
           Gp4
 pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
           Drosophila Melanogaster With A Phosphopeptide Substrate
           Gp4
 pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
           Drosophila Melanogaster With A Small Molecular Inhibitor
           Para-Nitrocatechol Sulphate
 pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
           Drosophila Melanogaster With A Small Molecular Inhibitor
           Para-Nitrocatechol Sulphate
          Length = 307

 Score = 30.0 bits (66), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)

Query: 123 NIPEDMIR--EALKVLLDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQ-R 179
           N P+ ++R   A +  +     P+++HC  G  R+G  +   R LQ+   S   D +   
Sbjct: 215 NPPQTLVRFVRAFRDRIGAEQRPIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIV 274

Query: 180 FAAAKARV 187
           +A  K RV
Sbjct: 275 YAMRKERV 282


>pdb|1YGR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
           Cd45
 pdb|1YGR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
           Cd45
 pdb|1YGU|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
           Rptp Cd45 With A Ptyr Peptide
 pdb|1YGU|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
           Rptp Cd45 With A Ptyr Peptide
          Length = 610

 Score = 29.6 bits (65), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLSSVFDEYQRFAA-AKARVS 188
           ++ P+LIHC+ G  +TG     L  L+      V D +Q   A  KAR+ 
Sbjct: 538 KSTPLLIHCRDGSQQTGIFCALLNLLESAETEEVVDIFQVVKALRKARLG 587


>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
           Tyrosine Phosphatase Ptp-SlBR7
          Length = 297

 Score = 29.6 bits (65), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 18/57 (31%)

Query: 117 HKEPFVNIPEDMIREALKVLLDVRNH--------PVLIHCKRGKHRTGCL----VGC 161
           HK P      D  +  L+++LDV           PV++HC  G  RTGC     +GC
Sbjct: 196 HKTP------DSAQPLLQLMLDVEEDRLASEGRGPVVVHCSAGIGRTGCFIATSIGC 246


>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
           Tyrosine Phosphatase Receptor, Type R
          Length = 283

 Score = 29.6 bits (65), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 14/52 (26%)

Query: 117 HKEPFVNIPEDMIREALKVLLDVRNH--------PVLIHCKRGKHRTGCLVG 160
           HK P      D  +  L+++LDV           PV++HC  G  RTGC + 
Sbjct: 183 HKTP------DSAQPLLQLMLDVEEDRLASQGRGPVVVHCSAGIGRTGCFIA 228


>pdb|1I9S|A Chain A, Crystal Structure Of The Rna Triphosphatase Domain Of
           Mouse Mrna Capping Enzyme
          Length = 210

 Score = 29.6 bits (65), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 102 LKSNGIKLFQFAIEGHKE-PFVNIPEDMIREALKVLLDVRNHPVLI--HCKRGKHRTGCL 158
           ++  GIK  +   +GH E P     E  IR  L    + R+ P LI  HC  G +RTG L
Sbjct: 79  IEKEGIKYIKLQCKGHGECPTTENTETFIR--LCERFNERSPPELIGVHCTHGFNRTGFL 136

Query: 159 V 159
           +
Sbjct: 137 I 137


>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
           Tyrosine Phosphatase, Non-Receptor Type 3
          Length = 287

 Score = 29.6 bits (65), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 137 LDVRNHPVLIHCKRGKHRTGCLV 159
           L V + PVL+HC  G  RTG LV
Sbjct: 205 LRVDSEPVLVHCSAGIGRTGVLV 227


>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
           13 (Dusp13)
 pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
           13 (Dusp13)
 pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
           13 (Dusp13)
 pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
           13 (Dusp13)
          Length = 205

 Score = 29.3 bits (64), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 106 GIKLFQFAIEGHKEPFVNIPEDMIREA--LKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           G+ L  + IE    PF ++    +  A  ++  L V    VL+HC  G  R+  LV
Sbjct: 94  GMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLV 149


>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
 pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
 pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
 pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
          Length = 198

 Score = 29.3 bits (64), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 106 GIKLFQFAIEGHKEPFVNIPEDMIREA--LKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           G+ L  + IE    PF ++    +  A  ++  L V    VL+HC  G  R+  LV
Sbjct: 94  GMSLEYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLV 149


>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
           Phosphatase Ptpn5 (step, Striatum Enriched Enriched
           Phosphatase)
          Length = 305

 Score = 28.5 bits (62), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 3/28 (10%)

Query: 143 PVLIHCKRGKHRTGCLVG---CLRKLQK 167
           P+++HC  G  RTGC +    C ++L++
Sbjct: 233 PIIVHCSAGIGRTGCFIATSICCQQLRQ 260


>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
           Phosphatase N14 At 1.65 A Resolution
          Length = 325

 Score = 28.5 bits (62), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)

Query: 140 RNHPVLIHCKRGKHRTGCLVGCLRKLQKWCL 170
           R+ P+++HC  G  RTG L+  L +L  +CL
Sbjct: 251 RHPPIVVHCSAGVGRTGVLI--LSELMIYCL 279


>pdb|2OOQ|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptprt
 pdb|2OOQ|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptprt
          Length = 286

 Score = 28.5 bits (62), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 8/18 (44%), Positives = 12/18 (66%)

Query: 143 PVLIHCKRGKHRTGCLVG 160
           P+++HC  G  RTGC + 
Sbjct: 214 PIVVHCSAGAGRTGCFIA 231


>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
 pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
          Length = 150

 Score = 28.5 bits (62), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 12/114 (10%)

Query: 52  IPPLNFSMVDNGIFRS-GFPD-SANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKL 109
           + P NFS V  G       P   A++ FL  L +R ++ L     P +++      G+ L
Sbjct: 3   VQPPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDS----CPGLTL 58

Query: 110 FQFAIEGHKEPFVNIPEDMIREALKVL--LDVRNHPVLIHCKRGKHRTGCLVGC 161
            +  I      F     D I   ++++   + R   V +HC  G  RTG ++ C
Sbjct: 59  HRLRIPD----FCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLAC 108


>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
           Kappa At 1.95a Resolution
          Length = 313

 Score = 28.1 bits (61), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 143 PVLIHCKRGKHRTGCLV 159
           P+++HC  G  RTGC +
Sbjct: 236 PIVVHCSAGAGRTGCYI 252


>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
 pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
          Length = 184

 Score = 28.1 bits (61), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)

Query: 98  NTEFLKSNGIKLFQFAIEGHKE----PFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKH 153
           N  F K +GI          +E     +     D I +AL      +N  VL+HC+ G  
Sbjct: 73  NANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQ----KNGRVLVHCREGYS 128

Query: 154 RTGCLV 159
           R+  LV
Sbjct: 129 RSPTLV 134


>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
 pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
          Length = 183

 Score = 28.1 bits (61), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)

Query: 98  NTEFLKSNGIKLFQFAIEGHKE----PFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKH 153
           N  F K +GI          +E     +     D I +AL      +N  VL+HC+ G  
Sbjct: 72  NANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQ----KNGRVLVHCREGYS 127

Query: 154 RTGCLV 159
           R+  LV
Sbjct: 128 RSPTLV 133


>pdb|2G59|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
           Tyrosine Phosphatase From Homo Sapiens
 pdb|2G59|B Chain B, Crystal Structure Of The Catalytic Domain Of Protein
           Tyrosine Phosphatase From Homo Sapiens
          Length = 297

 Score = 28.1 bits (61), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 143 PVLIHCKRGKHRTGCLVGCLRKLQ 166
           P++IHC  G  RTG  +   R LQ
Sbjct: 220 PMIIHCSAGVGRTGTFIALDRLLQ 243


>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
 pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
          Length = 348

 Score = 28.1 bits (61), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 125 PEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLVGC 161
           P D I +    + +     + +HCK G  RTG L+ C
Sbjct: 253 PTDAIVKEFLDICENAEGAIAVHCKAGLGRTGTLIAC 289


>pdb|2PA5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
           Ptpn9
 pdb|2PA5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
           Ptpn9
 pdb|4GE2|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
           Ptpn9 (Meg2) Complex With Compound 3
 pdb|4GE2|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
           Ptpn9 (Meg2) Complex With Compound 3
 pdb|4GE5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
           Ptpn9 (Meg2) Complex With Compound 5
 pdb|4GE5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
           Ptpn9 (Meg2) Complex With Compound 5
 pdb|4GE6|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
           Ptpn9 (Meg2) Complex With Compound 7
 pdb|4GE6|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
           Ptpn9 (Meg2) Complex With Compound 7
          Length = 314

 Score = 28.1 bits (61), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 3/46 (6%)

Query: 143 PVLIHCKRGKHRTGCLVG---CLRKLQKWCLSSVFDEYQRFAAAKA 185
           P+++HC  G  RTG       CL +L++    +VF    R    +A
Sbjct: 235 PIVVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQRA 280


>pdb|2GJT|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptpro
 pdb|2GJT|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptpro
          Length = 295

 Score = 28.1 bits (61), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 143 PVLIHCKRGKHRTGCLVGCLRKLQ 166
           P++IHC  G  RTG  +   R LQ
Sbjct: 218 PMIIHCSAGVGRTGTFIALDRLLQ 241


>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
           Sigma
          Length = 595

 Score = 28.1 bits (61), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 143 PVLIHCKRGKHRTGCLV 159
           P+++HC  G  RTGC +
Sbjct: 223 PIVVHCSAGVGRTGCFI 239


>pdb|3V0J|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Deletion Of 401-405
 pdb|3V0J|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Deletion Of 401-405
          Length = 334

 Score = 28.1 bits (61), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           +++  I+ H  P +      I +A   +    +H + IH K GK RTG LV
Sbjct: 87  VYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLV 137


>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
          Length = 583

 Score = 28.1 bits (61), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 143 PVLIHCKRGKHRTGCLV 159
           P+++HC  G  RTGC +
Sbjct: 225 PIVVHCSAGVGRTGCFI 241


>pdb|3V0E|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           256-576(C363s)
          Length = 324

 Score = 27.7 bits (60), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           +++  I+ H  P +      I +A   +    +H + IH K GK RTG LV
Sbjct: 72  VYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLV 122


>pdb|3V0D|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s)
 pdb|3V0D|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s)
 pdb|3V0F|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Form Ii
 pdb|3V0F|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Form Ii
 pdb|3V0G|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Form Iii
 pdb|3V0G|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Form Iii
 pdb|3V0G|C Chain C, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Form Iii
 pdb|3V0G|D Chain D, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Form Iii
 pdb|3V0H|A Chain A, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Complexed With D-Myo-
           Inositol-1,4,5-Triphosphate
 pdb|3V0H|B Chain B, Crystal Structure Of Ciona Intestinalis Voltage
           Sensor-Containing Phosphatase (Ci-Vsp), Residues
           241-576(C363s), Complexed With D-Myo-
           Inositol-1,4,5-Triphosphate
          Length = 339

 Score = 27.7 bits (60), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 109 LFQFAIEGHKEPFVNIPEDMIREALKVLLDVRNHPVLIHCKRGKHRTGCLV 159
           +++  I+ H  P +      I +A   +    +H + IH K GK RTG LV
Sbjct: 87  VYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDHVIAIHSKGGKGRTGTLV 137


>pdb|1RPM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
 pdb|1RPM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
          Length = 278

 Score = 27.3 bits (59), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 143 PVLIHCKRGKHRTGCLV 159
           P+++HC  G  RTGC +
Sbjct: 212 PLVVHCSAGAGRTGCFI 228


>pdb|3E97|A Chain A, Crystal Structure Of Transcriptional Regulator Of CrpFNR
           Family (Yp_604437.1) From Deinococcus Geothermalis Dsm
           11300 At 1.86 A Resolution
          Length = 231

 Score = 27.3 bits (59), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 11/18 (61%), Positives = 14/18 (77%)

Query: 121 FVNIPEDMIREALKVLLD 138
           F N+PED  REALKV+ +
Sbjct: 14  FQNVPEDAXREALKVVTE 31


>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
           Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
           Tyrosine Phosphatase)
          Length = 296

 Score = 27.3 bits (59), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 4/23 (17%)

Query: 143 PVLIHCKRGKHRTGCL----VGC 161
           P+++HC  G  RTGC     +GC
Sbjct: 224 PIVVHCSAGIGRTGCFIATRIGC 246


>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
           Mutant
          Length = 309

 Score = 27.3 bits (59), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 4/23 (17%)

Query: 143 PVLIHCKRGKHRTGCL----VGC 161
           P+++HC  G  RTGC     +GC
Sbjct: 235 PIVVHCSAGIGRTGCFIATRIGC 257


>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
           Phosphatase (heptp) Catalytic Domain
          Length = 309

 Score = 27.3 bits (59), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 4/23 (17%)

Query: 143 PVLIHCKRGKHRTGCL----VGC 161
           P+++HC  G  RTGC     +GC
Sbjct: 235 PIVVHCSAGIGRTGCFIATRIGC 257


>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
          Length = 309

 Score = 27.3 bits (59), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 4/23 (17%)

Query: 143 PVLIHCKRGKHRTGCL----VGC 161
           P+++HC  G  RTGC     +GC
Sbjct: 235 PIVVHCSAGIGRTGCFIATRIGC 257


>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
           Ordered E- Loop
 pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
           Partially Depleted Active Site
 pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
           Loop
          Length = 308

 Score = 27.3 bits (59), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 4/23 (17%)

Query: 143 PVLIHCKRGKHRTGCL----VGC 161
           P+++HC  G  RTGC     +GC
Sbjct: 234 PIVVHCSAGIGRTGCFIATRIGC 256


>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
           Rptp Lar
 pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
           Rptp Lar
          Length = 575

 Score = 27.3 bits (59), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 143 PVLIHCKRGKHRTGCLV 159
           P+++HC  G  RTGC +
Sbjct: 211 PMVVHCSAGVGRTGCFI 227


>pdb|1YWF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Protein
           Tyrosine Phosphatase Ptpb
 pdb|2OZ5|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Protein
           Tyrosine Phosphatase Ptpb In Complex With The Specific
           Inhibitor Omts
 pdb|2OZ5|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Protein
           Tyrosine Phosphatase Ptpb In Complex With The Specific
           Inhibitor Omts
          Length = 296

 Score = 26.9 bits (58), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 13/28 (46%), Positives = 15/28 (53%)

Query: 135 VLLDVRNHPVLIHCKRGKHRTGCLVGCL 162
           V L     PVL HC  GK RTG +V  +
Sbjct: 167 VTLLAAGRPVLTHCFAGKDRTGFVVALV 194


>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
           23 From Homo Sapiens In Complex With Ligand Malate Ion
          Length = 151

 Score = 26.9 bits (58), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 12/114 (10%)

Query: 52  IPPLNFSMVDNGIFRS-GFPD-SANFSFLQTLRLRSIIYLCPEPYPEANTEFLKSNGIKL 109
           + P NFS V  G       P   A++ FL  L +R ++ L     P +++      G+ L
Sbjct: 4   VQPPNFSWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDS----CPGLTL 59

Query: 110 FQFAIEGHKEPFVNIPEDMIREALKVL--LDVRNHPVLIHCKRGKHRTGCLVGC 161
            +  I      F     D I   ++++   + R   V +HC  G  RTG  + C
Sbjct: 60  HRLRIPD----FCPPAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTXLAC 109


>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
           Rattus Norvegicus Ortholog Of Human Protein Tyrosine
           Phosphatase, Receptor Type, D (Ptprd)
 pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
           Rattus Norvegicus Ortholog Of Human Protein Tyrosine
           Phosphatase, Receptor Type, D (Ptprd)
 pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
           Rattus Norvegicus Ortholog Of Human Protein Tyrosine
           Phosphatase, Receptor Type, D (Ptprd)
          Length = 299

 Score = 26.9 bits (58), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 8/17 (47%), Positives = 12/17 (70%)

Query: 143 PVLIHCKRGKHRTGCLV 159
           P+++HC  G  RTGC +
Sbjct: 220 PMVVHCSAGVGRTGCFI 236


>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
           (Ptpn4)
          Length = 320

 Score = 26.9 bits (58), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 7/46 (15%)

Query: 120 PFVNIPEDMIREALKVLLDVRN------HPVLIHCKRGKHRTGCLV 159
           P   +P+D   + L  +  VRN       PV++HC  G  RTG L+
Sbjct: 211 PDHGVPDDS-SDFLDFVCHVRNKRAGKEEPVVVHCSAGIGRTGVLI 255


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.323    0.139    0.424 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,486,898
Number of Sequences: 62578
Number of extensions: 210886
Number of successful extensions: 493
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 447
Number of HSP's gapped (non-prelim): 61
length of query: 201
length of database: 14,973,337
effective HSP length: 94
effective length of query: 107
effective length of database: 9,091,005
effective search space: 972737535
effective search space used: 972737535
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.5 bits)