BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028984
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q94CL9|KRP7_ARATH Cyclin-dependent kinase inhibitor 7 OS=Arabidopsis thaliana GN=KRP7
PE=1 SV=2
Length = 195
Score = 84.7 bits (208), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Query: 90 ADLKATSF-ETEVSTC-NNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSE 147
+DL+A ETE+ST N F K+ S SE G++ + MD + + + + +
Sbjct: 90 SDLEAHEISETEISTLLTNNFRKQGISS-SENLGETAE---MDSATTEMRDQRKTEKKKK 145
Query: 148 EEKIPSAAEIDEFFTAAEKREQERFAEKYNYDIVNDLPLEGRYQWVRL 195
EK P+ AE+D+FF+AAE+ EQ+RF EKYNYDIVND PLEGRYQWV L
Sbjct: 146 MEKSPTQAELDDFFSAAERYEQKRFTEKYNYDIVNDTPLEGRYQWVSL 193
>sp|Q0WNX9|KRP6_ARATH Cyclin-dependent kinase inhibitor 6 OS=Arabidopsis thaliana GN=KRP6
PE=1 SV=2
Length = 196
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 10/100 (10%)
Query: 98 ETEVSTCNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEI 157
ETE ST ++ETSP+SE G E T M+ S T R++P K P+AAEI
Sbjct: 105 ETETSTFITSNFRKETSPVSEGLG--ETTTEMESSSAT----KRKQPGVR--KTPTAAEI 156
Query: 158 DEFFTAAEKRE--QERFAEKYNYDIVNDLPLEGRYQWVRL 195
++ F+ E ++ +++F EKYN+DIVND PLEGRY+W RL
Sbjct: 157 EDLFSELESQDDKKKQFIEKYNFDIVNDEPLEGRYKWDRL 196
>sp|Q9FKB5|KRP3_ARATH Cyclin-dependent kinase inhibitor 3 OS=Arabidopsis thaliana GN=KRP3
PE=1 SV=1
Length = 222
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 38/45 (84%)
Query: 151 IPSAAEIDEFFTAAEKREQERFAEKYNYDIVNDLPLEGRYQWVRL 195
IP+ +E++EFF AE+++Q F EKYN+DIVND+PL GRY+WV++
Sbjct: 176 IPTTSEMEEFFAYAEQQQQRLFMEKYNFDIVNDIPLSGRYEWVQV 220
>sp|Q8GYJ3|KRP4_ARATH Cyclin-dependent kinase inhibitor 4 OS=Arabidopsis thaliana GN=KRP4
PE=1 SV=2
Length = 289
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 8/59 (13%)
Query: 139 SHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEKYNYDIVNDLPLEGRYQWVRLNE 197
SHRR+P++ E+DEFF+ AE+ +Q++F EKYN+D VN+ PL GR++W ++++
Sbjct: 239 SHRRRPTT--------PEMDEFFSGAEEEQQKQFIEKYNFDPVNEQPLPGRFEWTKVDD 289
>sp|Q7XDH8|KRP4_ORYSJ Cyclin-dependent kinase inhibitor 4 OS=Oryza sativa subsp. japonica
GN=KRP4 PE=2 SV=2
Length = 194
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 38/46 (82%)
Query: 151 IPSAAEIDEFFTAAEKREQERFAEKYNYDIVNDLPLEGRYQWVRLN 196
IP++AE++ FF A E+R+++ F +KYN+D VND PL GR++WV+L+
Sbjct: 149 IPASAELEAFFAAEEQRQRQAFIDKYNFDPVNDCPLPGRFEWVKLD 194
>sp|Q67J15|KRP6_ORYSJ Cyclin-dependent kinase inhibitor 6 OS=Oryza sativa subsp. japonica
GN=KRP6 PE=3 SV=1
Length = 86
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 13/83 (15%)
Query: 115 PLSEICG--DSEDQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERF 172
P + CG D ++ +D P K +++ + P E++ F AAE RF
Sbjct: 13 PAASSCGKRDGDNACVVDMPRK-----------AKKGRSPPEEEVEAFLAAAESSVARRF 61
Query: 173 AEKYNYDIVNDLPLEGRYQWVRL 195
A KYNYDIV D P++GRY+WVR+
Sbjct: 62 AAKYNYDIVKDAPMDGRYEWVRV 84
>sp|Q9LRY0|KRP5_ARATH Cyclin-dependent kinase inhibitor 5 OS=Arabidopsis thaliana GN=KRP5
PE=1 SV=1
Length = 189
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 9/83 (10%)
Query: 118 EICGDSE-----DQTSMDKPSKTPPESHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERF 172
E CGD+E D DK ES R S+ + I S EI++FF +AE+++Q F
Sbjct: 109 EACGDNERISRSDCNFGDKGFDL--ESENRSMISDSKSIQS--EIEDFFASAEQQQQRFF 164
Query: 173 AEKYNYDIVNDLPLEGRYQWVRL 195
+KYN+DIV+D PL GRY+WV++
Sbjct: 165 IQKYNFDIVSDNPLPGRYEWVKV 187
>sp|Q283L0|KRP5_ORYSJ Cyclin-dependent kinase inhibitor 5 OS=Oryza sativa subsp. japonica
GN=KRP5 PE=2 SV=1
Length = 221
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 139 SHRRKPSSEEEKIPSAAEIDEFFTAAEKREQERFAEKYNYDIVNDLPLEGRYQWVRLN 196
S RR +S +PS+ E++EFF AAE+++ + F E+YN+ VND PL GRY+W RL+
Sbjct: 163 SRRRMETSVCRYVPSSLEMEEFFAAAEQQQHQAFRERYNFCPVNDCPLPGRYEWTRLD 220
>sp|Q9SCR2|KRP2_ARATH Cyclin-dependent kinase inhibitor 2 OS=Arabidopsis thaliana GN=KRP2
PE=1 SV=1
Length = 209
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 105 NNKFSKE-ETSPLSEICGDSEDQTSMDKPSKTPP--ESHRRKPSSEEEKIPSAAEIDEFF 161
NN +E ETS + + SE+ +MD S ES RR S E + A E+++FF
Sbjct: 111 NNGDDRETETSWIYDDLNKSEESMNMDSSSVAVEDVESRRRLRKSLHETVKEA-ELEDFF 169
Query: 162 TAAEKREQERFAE---KYNYDIVNDLPLEG-RYQWVRLN 196
AEK + + E KYN+D D PL G RY+WV+LN
Sbjct: 170 QVAEKDLRNKLLECSMKYNFDFEKDEPLGGGRYEWVKLN 208
>sp|Q67Y93|KRP1_ARATH Cyclin-dependent kinase inhibitor 1 OS=Arabidopsis thaliana GN=KRP1
PE=1 SV=2
Length = 191
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 36/45 (80%)
Query: 151 IPSAAEIDEFFTAAEKREQERFAEKYNYDIVNDLPLEGRYQWVRL 195
+P+ +EI++FF AEK+ +E+F +KYN+D + PLEGRY+WV+L
Sbjct: 146 MPTESEIEDFFVEAEKQLKEKFKKKYNFDFEKEKPLEGRYEWVKL 190
>sp|Q2R185|KRP3_ORYSJ Cyclin-dependent kinase inhibitor 3 OS=Oryza sativa subsp. japonica
GN=KRP3 PE=2 SV=2
Length = 225
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 169 QERFAEKYNYDIVNDLPLEGRYQW 192
+ RFAEKYNYDI D PL+GRY+W
Sbjct: 186 RRRFAEKYNYDIALDRPLQGRYEW 209
>sp|Q283L3|KRP2_ORYSJ Cyclin-dependent kinase inhibitor 2 OS=Oryza sativa subsp. japonica
GN=KRP2 PE=2 SV=1
Length = 249
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%), Gaps = 4/29 (13%)
Query: 168 EQERFAEKYNYDIVNDLPLE----GRYQW 192
E ERFA KYN+D+V +PL+ GR++W
Sbjct: 215 EAERFAAKYNFDVVRGVPLDAGGAGRFEW 243
>sp|Q60439|CDN1B_CRIGR Cyclin-dependent kinase inhibitor 1B OS=Cricetulus griseus
GN=CDKN1B PE=2 SV=1
Length = 198
Score = 37.0 bits (84), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 18/25 (72%)
Query: 175 KYNYDIVNDLPLEGRYQWVRLNEAS 199
K+N+D N PLEGRYQW +++ S
Sbjct: 59 KWNFDFQNHNPLEGRYQWQEVDKGS 83
>sp|Q6Z6G5|KRP1_ORYSJ Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. japonica
GN=KRP1 PE=2 SV=1
Length = 262
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Query: 175 KYNYDIVNDLPLE-GRYQW 192
KYN+D+V +PL+ GR++W
Sbjct: 236 KYNFDVVRGVPLDAGRFEW 254
>sp|Q6SLL5|CDN1B_CANFA Cyclin-dependent kinase inhibitor 1B OS=Canis familiaris GN=CDKN1B
PE=2 SV=1
Length = 198
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 175 KYNYDIVNDLPLEGRYQWVRLNEAS 199
K+N+D N PLEG+Y+W + + S
Sbjct: 59 KWNFDFQNHKPLEGKYEWQEVEKGS 83
>sp|A2X9W8|KRP1_ORYSI Cyclin-dependent kinase inhibitor 1 OS=Oryza sativa subsp. indica
GN=KRP1 PE=2 SV=1
Length = 262
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Query: 175 KYNYDIVNDLPLE-GRYQW 192
KYN+D+V +PL+ GR++W
Sbjct: 236 KYNFDVVRGVPLDAGRFEW 254
>sp|Q8IXJ9|ASXL1_HUMAN Putative Polycomb group protein ASXL1 OS=Homo sapiens GN=ASXL1 PE=1
SV=3
Length = 1541
Score = 31.6 bits (70), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 45 QEVKLPSLE-NGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSADLKATSFETEVST 103
Q+V + L+ NGDS +SPH S+ + S E T SS D ++A K +S +
Sbjct: 976 QQVDIEKLKINGDSEALSPHGESTDTASDFEGHLTEDSSEADTREAAVTKGSSVDK---- 1031
Query: 104 CNNKFSKEETSPLSEICGDSEDQTSMDKPSKTPPESHRRKPSSEEEKIP 152
+ K + +++PLS++ GD T D P+S + + +KIP
Sbjct: 1032 -DEKPNWNQSAPLSKVNGDMRLVTRTD--GMVAPQSWVSRVCAVRQKIP 1077
>sp|Q9NU19|TB22B_HUMAN TBC1 domain family member 22B OS=Homo sapiens GN=TBC1D22B PE=1 SV=3
Length = 505
Score = 30.8 bits (68), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 31 SNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSA 90
S +L+SK T+ +V LEN V P ++ ST+ V N+ +SSSD A
Sbjct: 84 SFQTLNSKVALATAAQV----LENHSKLRVKPERSQSTTSDVPANYKVIKSSSD-----A 134
Query: 91 DLKATSFETEVSTCNNKFSKEETSPLSEI---CGDSEDQTSMDKPSKTPPESHRRK 143
L S +T N K+++ PL I DQ + S PP + R K
Sbjct: 135 QLSRNSSDT---CLRNPLHKQQSLPLRPIIPLVARISDQNA----SGAPPMTVREK 183
>sp|Q95LL3|TB22B_MACFA TBC1 domain family member 22B OS=Macaca fascicularis GN=TBC1D22B
PE=2 SV=1
Length = 505
Score = 30.8 bits (68), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 31 SNASLSSKKTKLTSQEVKLPSLENGDSFVVSPHKTSSTSDSVSENFSTSRSSSDDVIKSA 90
S +L+SK T+ +V LEN V P ++ ST+ V N+ +SSSD A
Sbjct: 84 SFQTLNSKVALATAAQV----LENHSKLRVKPERSQSTTSDVPANYKVIKSSSD-----A 134
Query: 91 DLKATSFETEVSTCNNKFSKEETSPLSEI---CGDSEDQTSMDKPSKTPPESHRRK 143
L S +T N K+++ PL I DQ + S PP + R K
Sbjct: 135 QLSRNSSDT---CLRNPLHKQQSLPLRPIIPLVARISDQNA----SGAPPMTVREK 183
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.301 0.117 0.307
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,584,159
Number of Sequences: 539616
Number of extensions: 2632368
Number of successful extensions: 13555
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 448
Number of HSP's that attempted gapping in prelim test: 10786
Number of HSP's gapped (non-prelim): 2086
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 58 (26.9 bits)