BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028987
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SR77|HBPL1_ARATH Heme-binding-like protein At3g10130, chloroplastic OS=Arabidopsis
thaliana GN=At3g10130 PE=1 SV=1
Length = 309
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 107/199 (53%), Gaps = 15/199 (7%)
Query: 10 VETPKYEVIQSTFDYEIRKYAPSVVAEVTYDPSTFKGNKDGG---FSVLANYIGALGNPQ 66
+ET + V+ T YEIR+ P VAE T P + G F+VLA Y+ +
Sbjct: 114 LETMNFRVLFRTDKYEIRQVEPYFVAE-TIMPGETGFDSYGASKSFNVLAEYLFG----K 168
Query: 67 NTKPEKIAMTAPVIT-KSSPEEEKIAMTAPVVT-KSDEKKMVTMQFVLPEKYQKAEEAPK 124
NT EK+ MT PV+T K EK+ MT PV+T K+ ++ M FV+P KY P
Sbjct: 169 NTIKEKMEMTTPVVTRKVQSVGEKMEMTTPVITSKAKDQNQWRMSFVMPSKY--GSNLPL 226
Query: 125 PVDERVVIREEGERKYGVVKFGGVASDEVVGEKVDKLKKSLEKDG-YKVVG--QFLLARY 181
P D V I++ + VV F G +DE + + +L+++L+ D ++V F +A+Y
Sbjct: 227 PKDPSVKIQQVPRKIVAVVAFSGYVTDEEIERRERELRRALQNDKKFRVRDGVSFEVAQY 286
Query: 182 NPPWTLPPFRTNEVMIPVE 200
NPP+TLP R NEV + VE
Sbjct: 287 NPPFTLPFMRRNEVSLEVE 305
>sp|Q9Y5Z4|HEBP2_HUMAN Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1
Length = 205
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 83/194 (42%), Gaps = 25/194 (12%)
Query: 10 VETPKYEVIQSTF----DYEIRKYAPSVVAEVTYDPSTFKGNKDGGFSVLANYIGALGNP 65
VETP ++ + YEIR Y P+ + + + GF+ L +YI
Sbjct: 20 VETPGWKAPEDAGPQPGSYEIRHYGPAKWVSTSVESMDWDSAIQTGFTKLNSYIQG---- 75
Query: 66 QNTKPEKIAMTAPVITKSSPEEEKIAMTAPVVTKSDEKKMVTMQFVLPEKYQKAEEAPKP 125
+N K KI MTAPV + P + + +T+ +P + Q + P+P
Sbjct: 76 KNEKEMKIKMTAPVTSYVEPGSGPFS-----------ESTITISLYIPSEQQF--DPPRP 122
Query: 126 VDERVVIREEGERKYGVVKFGGVASDEVVGEKVDKLKKSLEKDGYKVVGQ--FLLARYNP 183
++ V I + E V F G +S + E++ L L +DG KV + + A YN
Sbjct: 123 LESDVFIEDRAEMTVFVRSFDGFSSAQKNQEQLLTLASILREDG-KVFDEKVYYTAGYNS 181
Query: 184 PWTLPPFRTNEVMI 197
P L R NEV +
Sbjct: 182 PVKL-LNRNNEVWL 194
>sp|Q9WU63|HEBP2_MOUSE Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=1 SV=1
Length = 205
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 24 YEIRKYAPSVVAEVTYDPSTFKGNKDGGFSVLANYIGALGNPQNTKPEKIAMTAPVITKS 83
YEIR Y P+ + + GF+ L YI +N K KI +TAPV +
Sbjct: 38 YEIRHYGPAKWVSTCVESLDWDSAIQTGFTKLNGYIQG----KNEKEMKIKLTAPVTSYV 93
Query: 84 SPEEEKIAMTAPVVTKSDEKKMVTMQFVLPEKYQKAEEAPKPVDERVVIREEGERKYGVV 143
P + + +T+ +P + Q + P+P + V I + E V
Sbjct: 94 EPGSSPFS-----------ESTITISLYIPSEQQP--DPPRPSESDVFIEDRAEMTVFVR 140
Query: 144 KFGGVASDEVVGEKVDKLKKSLEKDGYKVVGQ--FLLARYNPPWTLPPFRTNEVMI 197
F G +S + E++ L L ++G KV + F A Y+ P+ L R NEV +
Sbjct: 141 SFDGFSSGQKNQEQLLTLANILREEG-KVFNEKVFYTAGYSSPFQLLD-RNNEVWL 194
>sp|Q6DJ66|HEBP1_XENTR Heme-binding protein 1 OS=Xenopus tropicalis GN=hebp1 PE=2 SV=1
Length = 190
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 18/143 (12%)
Query: 55 LANYIGALGNPQNTKPEKIAMTAPVITKSSPEEEKIAMTAPVVTKSDEKKMVTMQFVLPE 114
L Y+G N K + MT+PV+ S P E + + V + +P
Sbjct: 62 LLKYVGG----SNQKYAGMGMTSPVVITSYPAENETL-----------QPNVKVLLRIPS 106
Query: 115 KYQKAEEAPKPVDERVVIREEGERKYGVVKFGGVASDEVVGEKVDKLKKSLEKDGYKVVG 174
+YQ + P P D+ + I + + +FGG A + KL+ L D
Sbjct: 107 QYQA--DPPVPTDDTIHIEDRESVTFYSTQFGGYAKEADYVSHAAKLRSCLGPDISYHTD 164
Query: 175 QFLLARYNPPWTLPPFRTNEVMI 197
++ Y+PP P R NEV
Sbjct: 165 HYMCCGYDPPMK-PYGRRNEVWF 186
>sp|Q6NU05|HEBP1_XENLA Heme-binding protein 1 OS=Xenopus laevis GN=hebp1 PE=2 SV=1
Length = 190
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 23/173 (13%)
Query: 23 DYEIRKYAPSVVAEVTYDPSTFKGNKDGGFSVLANYIGALGNPQNTKPEKIAMTAPVITK 82
+YE K+ + V+ +D ++ K+G +L Y+G N K + MT+PVI
Sbjct: 35 EYEGGKFISTEVSGKPFDEAS----KEGVLRLLK-YVGG----SNNKSAGMGMTSPVIIN 85
Query: 83 SSPEEEKIAMTAPVVTKSDEKKMVTMQFVLPEKYQKAEEAPKPVDERVVIREEGERKYGV 142
S P E + V + +P +YQ + P P D + I +
Sbjct: 86 SYPSENDTL-----------QPNVKVLLRIPSQYQA--DPPVPTDNTIQIEDRESVTLYS 132
Query: 143 VKFGGVASDEVVGEKVDKLKKSLEKDGYKVVGQFLLARYNPPWTLPPFRTNEV 195
+FGG A + KL+ L D ++ Y+PP P R NEV
Sbjct: 133 TQFGGYAKEADYVSHAAKLRSCLGPDISYHSDYYMCCGYDPPMK-PYGRRNEV 184
>sp|Q5ZMB2|HEBP1_CHICK Heme-binding protein 1 OS=Gallus gallus GN=HEBP1 PE=2 SV=1
Length = 189
Score = 37.0 bits (84), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 84/206 (40%), Gaps = 30/206 (14%)
Query: 1 MGMVFGKI--SVETPKYEVI----QSTFDYEIRKY--APSVVAEVTYDPSTFKGNKDGGF 52
+GM+ + +VET Y V+ + YE R+ V EVT P + +K+
Sbjct: 2 LGMIKNSLLSTVETWPYRVLSKGEKEQLSYEERECEGGQFAVVEVTGKPFD-EASKEAAL 60
Query: 53 SVLANYIGALGNPQNTKPEKIAMTAPVITKSSPEEEKIAMTAPVVTKSDEKKMVTMQFVL 112
+L Y+G N K + MTAPV + P E+ ++ V + +
Sbjct: 61 KLL-KYVGG----SNDKGAGMGMTAPVSITAFPAED-----------GSLQQKVKVYLRI 104
Query: 113 PEKYQKAEEAPKPVDERVVIREEGERKYGVVKFGGVASDEVVGEKVDKLKKSLEKDGYKV 172
P ++Q + P P DE + I E +FGG A + KLK +L +
Sbjct: 105 PNQFQAS--PPCPSDESIKIEERQGMTIYSTQFGGYAKEVDYVNYAAKLKTALGSEAAYR 162
Query: 173 VGQFLLARYNPPWTLPPF-RTNEVMI 197
+ Y+PP + P+ R NEV
Sbjct: 163 KDFYFCNGYDPP--MKPYGRRNEVWF 186
>sp|Q30RE2|SELU_SULDN tRNA 2-selenouridine synthase OS=Sulfurimonas denitrificans (strain
ATCC 33889 / DSM 1251) GN=selU PE=3 SV=1
Length = 364
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 54/129 (41%), Gaps = 16/129 (12%)
Query: 58 YIGALGNPQNTKPEKIAMTAPVITKSSPEEEKIAMTAP--VVTKSDEKKMVTMQFVLPEK 115
+IG P+N A+ AP+I + ++++ +T VV + FVL E
Sbjct: 218 HIGNAFMPENLIS--TAINAPLIILETQIDKRVEITLNEYVVQAQEAYLEAGFDFVLEEW 275
Query: 116 YQKAEEAPKPVDERVVIREEGERKYGVVKFGGVASDEVVGEKVDKLKKSLEKDGYKVVGQ 175
Q + A K + +R G KY V + +D+ KKS DGYK +
Sbjct: 276 SQSIQNAMKRI-----VRRLGNEKYTKVT-------AIFESALDEQKKSGSYDGYKEWAK 323
Query: 176 FLLARYNPP 184
FLL Y P
Sbjct: 324 FLLEEYYDP 332
>sp|Q9R257|HEBP1_MOUSE Heme-binding protein 1 OS=Mus musculus GN=Hebp1 PE=1 SV=2
Length = 190
Score = 35.4 bits (80), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 23/146 (15%)
Query: 55 LANYIGALGNPQNTKPEKIAMTAPVITKSSPEEEKIAMTAPVVTKSDEKKMVTMQFVLPE 114
+ Y+G N K + MT PV P E+ +K + + F +P
Sbjct: 62 IMKYVGG----TNDKGVGMGMTVPVSFALFPNED-----------GSLQKKLKVWFRIPN 106
Query: 115 KYQKAEEAPKPVDERVVIRE-EGERKYGVVKFGGVASDEVVGEKVDKLKKSLEKDGYKVV 173
++Q + P P DE V I E EG Y +FGG A + +L+ +LE
Sbjct: 107 QFQGS--PPAPSDESVKIEEREGITVYS-TQFGGYAKEADYVAHATQLRTTLEGTPATYQ 163
Query: 174 GQ-FLLARYNPPWTLPPF-RTNEVMI 197
G + A Y+PP + P+ R NEV +
Sbjct: 164 GDVYYCAGYDPP--MKPYGRRNEVWL 187
>sp|Q148C9|HEBP1_BOVIN Heme-binding protein 1 OS=Bos taurus GN=HEBP1 PE=2 SV=1
Length = 191
Score = 34.7 bits (78), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 58 YIGALGNPQNTKPEKIAMTAPVITKSSPEEEKIAMTAPVVTKSDEKKMVTMQFVLPEKYQ 117
Y+G N K + MT P+ P ++ D +K + + F +P K+Q
Sbjct: 65 YVGG----SNDKGLGMGMTVPISFAVFPSDD-----------GDLQKKLKVWFRIPNKFQ 109
Query: 118 KAEEAPKPVDERVVIRE-EGERKYGVVKFGGVASDEVVGEKVDKLKKSLEKDGYKVVGQF 176
+ P P D+ + I + EG Y +FGG A + +L+ +LE +
Sbjct: 110 --SDPPAPSDDSIKIEDREGITVYS-TQFGGYAKAADYAAQAAQLRSALESTAKYQTDFY 166
Query: 177 LLARYNPPWTLPPF-RTNEVMI 197
Y+PP + P+ R NEV +
Sbjct: 167 FCTGYDPP--MKPYGRRNEVWL 186
>sp|Q9NRV9|HEBP1_HUMAN Heme-binding protein 1 OS=Homo sapiens GN=HEBP1 PE=1 SV=1
Length = 189
Score = 33.9 bits (76), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 22/145 (15%)
Query: 55 LANYIGALGNPQNTKPEKIAMTAPVITKSSPEEEKIAMTAPVVTKSDEKKMVTMQFVLPE 114
+A Y G N K + MT P+ P E+ +K + + F +P
Sbjct: 62 VAKYAGG----TNDKGIGMGMTVPISFAVFPNED-----------GSLQKKLKVWFRIPN 106
Query: 115 KYQKAEEAPKPVDERVVIRE-EGERKYGVVKFGGVASDEVVGEKVDKLKKSLEKDGYKVV 173
++Q + P P D+ V I E EG Y ++FGG A + + +L+ +LE
Sbjct: 107 QFQ--SDPPAPSDKSVKIEEREGITVYS-MQFGGYAKEADYVAQATRLRAALEGTATYRG 163
Query: 174 GQFLLARYNPPWTLPPF-RTNEVMI 197
+ Y+PP + P+ R NE+ +
Sbjct: 164 DIYFCTGYDPP--MKPYGRRNEIWL 186
>sp|O88737|BSN_MOUSE Protein bassoon OS=Mus musculus GN=Bsn PE=1 SV=4
Length = 3942
Score = 32.3 bits (72), Expect = 1.9, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 41/100 (41%), Gaps = 11/100 (11%)
Query: 46 GNKDGGFSVLANYIGALGNPQNTKPEKIAMTA-PVITKSSPEEEKIAMTAPVVTKSD--E 102
G G A+ +PQ TK A A P TK+SP+ + + T P T S E
Sbjct: 561 GQPSGSLPAKASPQATKASPQATKASPQATKASPQTTKASPQAKPLRATEPSKTSSSAQE 620
Query: 103 KKMVTMQFVLPEKYQKAEEAPKPVDERVVIREEGERKYGV 142
KK VT KAE PKP E V + K GV
Sbjct: 621 KKTVTS--------AKAEPVPKPPPETTVPPGTPKAKSGV 652
>sp|Q9VY86|TM2D2_DROME TM2 domain-containing protein CG11103 OS=Drosophila melanogaster
GN=CG11103 PE=2 SV=3
Length = 224
Score = 32.3 bits (72), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 108 MQFVLPEKYQKAEEAPKPVDERVVIREEGERKYGVVKFGGVASDEV 153
M LP + ++ PVD R + E+KYG +KFGG +EV
Sbjct: 82 MCSFLPRDFLDCKD---PVDHRENATAQQEKKYGCLKFGGSTYEEV 124
>sp|Q5ISC6|HEBP1_PIG Heme-binding protein 1 OS=Sus scrofa GN=HEBP1 PE=2 SV=1
Length = 189
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 90 IAMTAPV---VTKSDE---KKMVTMQFVLPEKYQKAEEAPKPVDERVVIREEGERKYGVV 143
+ MT P+ V SD +K + + F +P ++Q P P D+ + I E +
Sbjct: 76 MGMTVPISFAVFPSDGGSLQKKLKVWFRIPNEFQ--SNPPVPSDDSIKIEERESITVYSL 133
Query: 144 KFGGVASDEVVGEKVDKLKKSLEKDGYKVVGQFLLARYNPPWTLPPF-RTNEVMI 197
+FGG A + + +L+ +LE + Y+PP + P+ R NEV +
Sbjct: 134 QFGGYAKEADYVARAAQLRTALEGIATCRSDVYFCTGYDPP--MKPYGRRNEVWL 186
>sp|A6QBB6|SELU_SULNB tRNA 2-selenouridine synthase OS=Sulfurovum sp. (strain NBC37-1)
GN=selU PE=3 SV=1
Length = 364
Score = 30.4 bits (67), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 14/110 (12%)
Query: 77 APVITKSSPEEEKIAMT-APVVTKSDEK-KMVTMQFVLPEKYQKAEEAPKPVDERVVIRE 134
AP++ +P E++I +T V K+ EK K V L + EA K + +R+
Sbjct: 237 APLVVLETPTEKRIEITFDEYVAKAHEKYKEVYHADYLKVWTEDMHEAMKRIQKRL---- 292
Query: 135 EGERKYGVVKFGGVASDEVVGEKVDKLKKSLEKDGYKVVGQFLLARYNPP 184
G ++Y +V E+ + + + KK+ +GYKV +LL+ Y P
Sbjct: 293 -GGQRYKIVC-------EIFEDALKEQKKNSSLEGYKVWIAYLLSEYYDP 334
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,031,851
Number of Sequences: 539616
Number of extensions: 3608309
Number of successful extensions: 9258
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 9184
Number of HSP's gapped (non-prelim): 112
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)