BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028988
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P26291|UCRIA_PEA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Pisum
sativum GN=petC PE=2 SV=1
Length = 230
Score = 290 bits (743), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/194 (75%), Positives = 165/194 (85%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPD 62
SS++LS TPSQLCS K G+ CPS A LVKP RTQM + GMKI CQATSIPADRVPD
Sbjct: 2 SSTTLSPTTPSQLCSGKSGISCPSIALLVKPTRTQMTGRGNKGMKITCQATSIPADRVPD 61
Query: 63 MGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNT 122
M KR+ +NLLLLGA+SLPT MLVPY +F PPG GS+ GGT AKDA+GND++A +WL T
Sbjct: 62 MSKRKTLNLLLLGALSLPTAGMLVPYGSFLVPPGSGSSTGGTVAKDAVGNDVVATEWLKT 121
Query: 123 HGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQ 182
H PGDRTLT+GLKGDPTYLVVEKD+TLA++ INAVCTHLGCVVP+N AENKFICPCHGSQ
Sbjct: 122 HAPGDRTLTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPFNQAENKFICPCHGSQ 181
Query: 183 YNNQGRVVRGPAPL 196
YN+QGRVVRGPAPL
Sbjct: 182 YNDQGRVVRGPAPL 195
>sp|Q69S39|UCRIA_ORYSJ Cytochrome b6-f complex iron-sulfur subunit, chloroplastic OS=Oryza
sativa subsp. japonica GN=petC PE=1 SV=1
Length = 225
Score = 274 bits (701), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/197 (68%), Positives = 153/197 (77%), Gaps = 6/197 (3%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQA-TSIPADR 59
MAS++ +++ P+QLC S+ + P + R I CQA +SIPADR
Sbjct: 1 MASTALSTASNPTQLCRSRASLGKPVKGLGFGRERVPRTATT-----ITCQAASSIPADR 55
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMGKRQLMNLLLLGA+SLPT MLVPY FF P G G+AGGG AKD +GND++A +W
Sbjct: 56 VPDMGKRQLMNLLLLGAISLPTVGMLVPYGAFFIPAGSGNAGGGQVAKDKLGNDVLAEEW 115
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L THGP DRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKFICPCH
Sbjct: 116 LKTHGPNDRTLTQGLKGDPTYLVVEADKTLATYGINAVCTHLGCVVPWNAAENKFICPCH 175
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQYNNQGRVVRGPAPL
Sbjct: 176 GSQYNNQGRVVRGPAPL 192
>sp|P08980|UCRIA_SPIOL Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Spinacia oleracea GN=petC PE=1 SV=2
Length = 230
Score = 272 bits (696), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 148/196 (75%), Positives = 170/196 (86%), Gaps = 3/196 (1%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQ-MVTKNPM-GMKIKCQATSIPADRV 60
+S +LSSATPSQLCSSK GMF PS A L K R +++K + GMK+ CQATSIPAD V
Sbjct: 2 ASFTLSSATPSQLCSSKNGMFAPSLA-LAKAGRVNVLISKERIRGMKLTCQATSIPADNV 60
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+ +NLLLLGA+SLPTG+ML+PYA+FF PPG G+ GGT AKDA+GND+IAA+WL
Sbjct: 61 PDMQKRETLNLLLLGALSLPTGYMLLPYASFFVPPGGGAGTGGTIAKDALGNDVIAAEWL 120
Query: 121 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHG 180
TH PGDRTLT+GLKGDPTYLVVE DKTLA++GINAVCTHLGCVVP+N+AENKFICPCHG
Sbjct: 121 KTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINAVCTHLGCVVPFNAAENKFICPCHG 180
Query: 181 SQYNNQGRVVRGPAPL 196
SQYNNQGRVVRGPAPL
Sbjct: 181 SQYNNQGRVVRGPAPL 196
>sp|O49078|UCRIA_FRIAG Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Fritillaria agrestis GN=petC PE=2 SV=1
Length = 230
Score = 270 bits (690), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 139/196 (70%), Positives = 159/196 (81%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS++ ++ TPSQL ++K G + PSRA L K AR K + K+ CQATSIPADRV
Sbjct: 1 MASTTLSATPTPSQLSAAKNGAYSPSRALLGKTARGLYPEKEMVSRKVTCQATSIPADRV 60
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDMGKRQ MNLLLLGA+SLPT ML+PY FF PP G GGG AKDA+GNDI+AA WL
Sbjct: 61 PDMGKRQTMNLLLLGALSLPTAGMLIPYGAFFVPPSSGGGGGGIVAKDAVGNDIVAAAWL 120
Query: 121 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHG 180
THGPGDRTL +GL+GDPTYLVVE D++LA+YGINAVCTHLGCVVPWN AENKF+CPCHG
Sbjct: 121 KTHGPGDRTLAQGLRGDPTYLVVENDRSLATYGINAVCTHLGCVVPWNKAENKFLCPCHG 180
Query: 181 SQYNNQGRVVRGPAPL 196
SQYNNQG+VVRGPAPL
Sbjct: 181 SQYNNQGKVVRGPAPL 196
>sp|Q7X9A6|UCRIA_WHEAT Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Triticum aestivum GN=petC PE=2 SV=1
Length = 222
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 126/196 (64%), Positives = 147/196 (75%), Gaps = 7/196 (3%)
Query: 1 MASSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRV 60
MAS++ +++ P+QLC ++ C KP + + + I C A SI ADRV
Sbjct: 1 MASTALSTASNPTQLCRTRASSLC-------KPVKGLGFGRERIPRNITCMAGSISADRV 53
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+LMNLLLLGA+SLPT MLVPY +F P G GS GG AKD +GNDI+ DWL
Sbjct: 54 PDMSKRELMNLLLLGAISLPTFGMLVPYGSFLVPAGSGSNAGGVAAKDKLGNDILVEDWL 113
Query: 121 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHG 180
THGP DRTL +GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN+AENKF+CPCHG
Sbjct: 114 KTHGPNDRTLAQGLKGDPTYLVVESDKTLATYGINAVCTHLGCVVPWNAAENKFLCPCHG 173
Query: 181 SQYNNQGRVVRGPAPL 196
SQYNNQG+VVRGPAPL
Sbjct: 174 SQYNNQGKVVRGPAPL 189
>sp|Q9ZR03|UCRIA_ARATH Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Arabidopsis thaliana GN=petC PE=1 SV=1
Length = 229
Score = 263 bits (671), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 145/196 (73%), Positives = 164/196 (83%), Gaps = 4/196 (2%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPART--QMVTKNPMGMKIKCQATSIPADRV 60
+SSSLS AT QL SS+ + S VKP + QMV K +G++I CQA+SIPADRV
Sbjct: 2 ASSSLSPAT--QLGSSRSALMAMSSGLFVKPTKMNHQMVRKEKIGLRISCQASSIPADRV 59
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWL 120
PDM KR+ +NLLLLGA+SLPTG+MLVPYATFF PPG G GGGT AKDA+GND++AA+WL
Sbjct: 60 PDMEKRKTLNLLLLGALSLPTGYMLVPYATFFVPPGTGGGGGGTPAKDALGNDVVAAEWL 119
Query: 121 NTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHG 180
THGPGDRTLT+GLKGDPTYLVVE DKTLA+YGINAVCTHLGCVVPWN AENKF+CPCHG
Sbjct: 120 KTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNKAENKFLCPCHG 179
Query: 181 SQYNNQGRVVRGPAPL 196
SQYN QGRVVRGPAPL
Sbjct: 180 SQYNAQGRVVRGPAPL 195
>sp|Q69GY7|UCRIA_SOLTU Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Solanum tuberosum GN=petC PE=2 SV=1
Length = 230
Score = 245 bits (625), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/199 (72%), Positives = 160/199 (80%), Gaps = 8/199 (4%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS TPSQLCSSK G+ S+A LVKP + + + MG MK KC A SIPAD
Sbjct: 2 ASSTLSHVTPSQLCSSKSGVSSVSQALLVKPMK---INGHGMGKDKRMKAKCMAASIPAD 58
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA++LPTG MLVPYATFFAPPG G GT AKDA GND++
Sbjct: 59 DRVPDMEKRNLMNLLLLGALALPTGGMLVPYATFFAPPGSGGGSSGTIAKDANGNDVVVT 118
Query: 118 DWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICP 177
+WL TH PG RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVPWN+AENKFICP
Sbjct: 119 EWLKTHSPGTRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPWNTAENKFICP 178
Query: 178 CHGSQYNNQGRVVRGPAPL 196
CHGSQYNNQG+VVRGPAPL
Sbjct: 179 CHGSQYNNQGKVVRGPAPL 197
>sp|Q02585|UCRIB_TOBAC Cytochrome b6-f complex iron-sulfur subunit 2, chloroplastic
OS=Nicotiana tabacum GN=petC2 PE=2 SV=1
Length = 228
Score = 234 bits (598), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/199 (71%), Positives = 163/199 (81%), Gaps = 10/199 (5%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS T QLCSSK G+ S+ L+KP + + + +G MK+KC ATSIPAD
Sbjct: 2 ASSTLSPVT--QLCSSKSGLSSVSQCLLLKPMK---INSHGLGKDKRMKVKCMATSIPAD 56
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA+SLPT MLVPYATFFAPPG G GGT AKDA+GND+IA+
Sbjct: 57 DRVPDMEKRNLMNLLLLGALSLPTAGMLVPYATFFAPPGSGGGSGGTPAKDALGNDVIAS 116
Query: 118 DWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICP 177
+WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICP
Sbjct: 117 EWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICP 176
Query: 178 CHGSQYNNQGRVVRGPAPL 196
CHGSQYNNQGRVVRGPAPL
Sbjct: 177 CHGSQYNNQGRVVRGPAPL 195
>sp|P30361|UCRIA_TOBAC Cytochrome b6-f complex iron-sulfur subunit 1, chloroplastic
OS=Nicotiana tabacum GN=petC1 PE=2 SV=2
Length = 228
Score = 232 bits (592), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 142/199 (71%), Positives = 161/199 (80%), Gaps = 10/199 (5%)
Query: 3 SSSSLSSATPSQLCSSKGGMFCPSRAFLVKPARTQMVTKNPMG----MKIKCQATSIPAD 58
+SS+LS T QLCSSK G+ S+ LVKP + + + +G MK+KC ATSIPAD
Sbjct: 2 ASSTLSPVT--QLCSSKSGLSSVSQCLLVKPMK---INSHGLGKDKRMKVKCMATSIPAD 56
Query: 59 -RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAA 117
RVPDM KR LMNLLLLGA+SLPT MLVPY TFF PPG G GGT AKDA+GND+IA+
Sbjct: 57 DRVPDMEKRNLMNLLLLGALSLPTAGMLVPYGTFFVPPGSGGGSGGTPAKDALGNDVIAS 116
Query: 118 DWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICP 177
+WL TH PG+RTLT+GLKGDPTYLVVE D TLA+YGINAVCTHLGCVVP+N+AENKFICP
Sbjct: 117 EWLKTHPPGNRTLTQGLKGDPTYLVVENDGTLATYGINAVCTHLGCVVPFNAAENKFICP 176
Query: 178 CHGSQYNNQGRVVRGPAPL 196
CHGSQYNNQGRVVRGPAPL
Sbjct: 177 CHGSQYNNQGRVVRGPAPL 195
>sp|Q9SBN3|UCRIA_VOLCA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Volvox carteri GN=petC PE=2 SV=1
Length = 206
Score = 196 bits (499), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 95/164 (57%), Positives = 115/164 (70%), Gaps = 3/164 (1%)
Query: 33 PARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFF 92
P + Q ++ + ++ A S VPDM KR +MNL+LLG SLP G + + Y FF
Sbjct: 12 PCKAQATRRSRVMSVVRAAAVS---SEVPDMNKRNIMNLILLGGASLPVGSLALGYGAFF 68
Query: 93 APPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASY 152
PP G GG AKDA+GNDI A WL TH GDR+L++GLKGDPTYL+V D T+ Y
Sbjct: 69 VPPSSGGGSGGQAAKDALGNDIKANAWLATHQKGDRSLSQGLKGDPTYLIVTADGTIEKY 128
Query: 153 GINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPL 196
G+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPL
Sbjct: 129 GLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPL 172
>sp|B0JXB7|UCRI_MICAN Cytochrome b6-f complex iron-sulfur subunit OS=Microcystis
aeruginosa (strain NIES-843) GN=petC PE=3 SV=1
Length = 179
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 109/137 (79%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ L P +F PP G GGG TAKDA+GND+I + +
Sbjct: 9 VPDLGRRQFMNLLTFGTITGVAAGALYPIVKYFIPPSAGGTGGGVTAKDALGNDVIVSQF 68
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L +H GDRTL +GLKGDPTYLVV++DKTLA+YGINAVCTHLGCVVPWN++E KF+CPCH
Sbjct: 69 LTSHNAGDRTLAQGLKGDPTYLVVQEDKTLANYGINAVCTHLGCVVPWNASEEKFMCPCH 128
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQYN +G+VVRGPAPL
Sbjct: 129 GSQYNAEGKVVRGPAPL 145
>sp|Q5CC93|UCRIA_CYAPA Cytochrome b6-f complex iron-sulfur subunit 1, cyanelle
OS=Cyanophora paradoxa GN=petC-1 PE=2 SV=1
Length = 239
Score = 193 bits (491), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 126/181 (69%), Gaps = 12/181 (6%)
Query: 17 SSKGGMFCPSRAFLVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGA 76
S + G F P A KPA+ + + C A S D VPDMGKR+LMNLLLLGA
Sbjct: 36 SKQVGSFKPVFA-AAKPAKETTFS-------VSCSAAS---DDVPDMGKRKLMNLLLLGA 84
Query: 77 VSLPTGFMLVPYATFFAPP-GLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLK 135
++ P P+ +F PP G AG G AKDA+GND+ + WL TH PGDR+L +GLK
Sbjct: 85 IAGPVAGAGGPFVSFLVPPKAGGGAGAGQAAKDALGNDVKVSSWLETHKPGDRSLAQGLK 144
Query: 136 GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAP 195
GD TYL+V++D TL +YG+NAVCTHLGCVVPWN++ENKF+CPCHGSQY+ G+VVRGPAP
Sbjct: 145 GDATYLIVKEDGTLENYGLNAVCTHLGCVVPWNASENKFMCPCHGSQYDRTGKVVRGPAP 204
Query: 196 L 196
L
Sbjct: 205 L 205
>sp|A5GMW1|UCRI_SYNPW Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain WH7803) GN=petC PE=3 SV=1
Length = 178
Score = 193 bits (491), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 107/144 (74%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T +PA VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN
Sbjct: 2 TQMPAGDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A+ WL+TH GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 AVTASGWLSTHPAGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KF+CPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPL 145
>sp|P49728|UCRIA_CHLRE Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Chlamydomonas reinhardtii GN=petC PE=1 SV=1
Length = 206
Score = 192 bits (489), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 30 LVKPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYA 89
+ PA+ + ++ + ++ A S VPDM KR +MNL+L G LP + + Y
Sbjct: 9 VAAPAKASAIRRSRVMPVVRAAAAS---SEVPDMNKRNIMNLILAGGAGLPITTLALGYG 65
Query: 90 TFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTL 149
FF PP G GGG AKDA+GNDI A +WL TH GDR+L++GLKGDPTYL+V D T+
Sbjct: 66 AFFVPPSSGGGGGGQAAKDALGNDIKAGEWLKTHLAGDRSLSQGLKGDPTYLIVTADSTI 125
Query: 150 ASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPL 196
YG+NAVCTHLGCVVPW +AENKF CPCHGSQYN +G+VVRGPAPL
Sbjct: 126 EKYGLNAVCTHLGCVVPWVAAENKFKCPCHGSQYNAEGKVVRGPAPL 172
>sp|Q3AWL7|UCRI_SYNS9 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9902) GN=petC PE=3 SV=1
Length = 178
Score = 192 bits (489), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 106/144 (73%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T IP+ VP MG+RQ MNLL G+V+ L P A +F PP +GGGTTAKD +GN
Sbjct: 2 TQIPSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVARYFIPPKAAGSGGGTTAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A WL+TH GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 VVTATGWLSTHPEGDRSLVQGLKGDPTYLIVEGADAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KF+CPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPL 145
>sp|Q7V654|UCRI_PROMM Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9313) GN=petC PE=3 SV=2
Length = 178
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 105/144 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN
Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A+ WL H GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 SVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KF+CPCHGSQYN+ G+VVRGPAPL
Sbjct: 122 KFVCPCHGSQYNSTGKVVRGPAPL 145
>sp|A2C7F6|UCRI_PROM3 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9303) GN=petC PE=3 SV=1
Length = 178
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 105/144 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P +F PP +GGGT+AKD +GN
Sbjct: 2 TQMTSSDVPGMGRRQFMNLLTFGSVTGVALGSLYPVVKYFIPPRASGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A+ WL H GDR+L +GLKGDPTYL+VE D + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 SVTASGWLANHSDGDRSLVQGLKGDPTYLIVEGDDAIGSYGINAICTHLGCVVPWNSGVN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KF+CPCHGSQYN+ G+VVRGPAPL
Sbjct: 122 KFVCPCHGSQYNSTGKVVRGPAPL 145
>sp|P0C8N8|UCRI_THEEB Cytochrome b6-f complex iron-sulfur subunit OS=Thermosynechococcus
elongatus (strain BP-1) GN=petC PE=1 SV=1
Length = 180
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 105/137 (76%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G GGG AKDA+GNDI +++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEY 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L H PGDR+L +G+KGDPTY++V +D +A+YG+NAVCTHLGCVVPWN +ENKFICPCH
Sbjct: 70 LAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCH 129
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQY++ G+VVRGPAPL
Sbjct: 130 GSQYDSTGKVVRGPAPL 146
>sp|P0C8N7|UCRI_SYNEL Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus
elongatus GN=petC PE=3 SV=1
Length = 180
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 105/137 (76%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G ++ L P +F PP G GGG AKDA+GNDI +++
Sbjct: 10 VPDMGRRQFMNLLTFGTITGTALGALYPVVKYFIPPASGGTGGGAVAKDALGNDIKVSEY 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L H PGDR+L +G+KGDPTY++V +D +A+YG+NAVCTHLGCVVPWN +ENKFICPCH
Sbjct: 70 LAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNAVCTHLGCVVPWNVSENKFICPCH 129
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQY++ G+VVRGPAPL
Sbjct: 130 GSQYDSTGKVVRGPAPL 146
>sp|Q3ALY0|UCRI_SYNSC Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9605) GN=petC PE=3 SV=1
Length = 178
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 108/144 (75%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P A +F PP +GGGT+AKD +GN
Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPKAAGSGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I A+ WL++H GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 PITASGWLSSHPEGDRSLVQGLKGDPTYLIVEGEDAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KF+CPCHGSQY++ G+VVRGPAPL
Sbjct: 122 KFMCPCHGSQYDSTGKVVRGPAPL 145
>sp|A5GRU8|UCRI_SYNR3 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain RCC307) GN=petC PE=3 SV=1
Length = 178
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 104/144 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T I A VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GN
Sbjct: 2 TQISAKDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPKASGAGGGTTAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
D+ A+ WL H GDR+L +GLKGDPTYL+V+ ++ YGINA+CTHLGCVVPWN+ N
Sbjct: 62 DVTASGWLADHKEGDRSLVQGLKGDPTYLIVDGPDSIGDYGINAICTHLGCVVPWNAGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KF+CPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPL 145
>sp|P26292|UCRI_SYNP2 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=petC PE=3 SV=1
Length = 180
Score = 187 bits (475), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/137 (64%), Positives = 108/137 (78%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ +NLL +G + L P +F PP G AGGG AKDA+GNDII +D+
Sbjct: 10 VPDLGRRQFLNLLWVGTAAGTALGGLYPVIKYFIPPSSGGAGGGVIAKDALGNDIIVSDY 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L TH GDR+L +GLKGDPTY+VVE D T++SYGINA+CTHLGCVVPWN+AENKF+CPCH
Sbjct: 70 LQTHTAGDRSLAQGLKGDPTYVVVEGDNTISSYGINAICTHLGCVVPWNTAENKFMCPCH 129
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQY+ G+VVRGPAPL
Sbjct: 130 GSQYDETGKVVRGPAPL 146
>sp|Q114L6|UCRI_TRIEI Cytochrome b6-f complex iron-sulfur subunit OS=Trichodesmium
erythraeum (strain IMS101) GN=petC PE=3 SV=1
Length = 179
Score = 187 bits (474), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/146 (63%), Positives = 110/146 (75%), Gaps = 2/146 (1%)
Query: 51 QATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAI 110
QA P VP MG+RQ MNLL G V+ L P +F PP G +GGG TAKDA+
Sbjct: 3 QAEGTP--DVPSMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPSSGGSGGGVTAKDAL 60
Query: 111 GNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSA 170
GNDII +++L H G+RTL +GLKGDPTY+V+E ++TLA YG+NAVCTHLGCVVPWN +
Sbjct: 61 GNDIIVSEFLANHNSGERTLAQGLKGDPTYVVIEGEQTLAEYGLNAVCTHLGCVVPWNGS 120
Query: 171 ENKFICPCHGSQYNNQGRVVRGPAPL 196
ENKFICPCHGSQY+N G+VVRGPAPL
Sbjct: 121 ENKFICPCHGSQYDNTGKVVRGPAPL 146
>sp|Q0I872|UCRI_SYNS3 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain CC9311) GN=petC PE=3 SV=1
Length = 178
Score = 184 bits (467), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 106/144 (73%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T +PA VP MG+RQ MNLL G+V+ L P A +F PP GGGT+AKD +GN
Sbjct: 2 TQMPASDVPGMGRRQFMNLLTFGSVTGVALGALYPVANYFIPPRAAGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ A+ WL++H GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 SVTASGWLSSHAEGDRSLVQGLKGDPTYLIVEGVDAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KF+CPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPL 145
>sp|P26290|UCRIB_SYNY3 Cytochrome b6-f complex iron-sulfur subunit 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=petC2 PE=3 SV=2
Length = 180
Score = 183 bits (464), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 106/137 (77%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPD+G+RQ MNLL G ++ L P + PP G +GGG TAKDA+GND+ ++
Sbjct: 10 VPDLGRRQFMNLLTFGTITGVAAGALYPAVKYLIPPSSGGSGGGVTAKDALGNDVKVTEF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L +H GDR L +GLKGDPTY+VV+ D T+A+YGINAVCTHLGCVVPWN++ENKF+CPCH
Sbjct: 70 LASHNAGDRVLAQGLKGDPTYIVVQGDDTIANYGINAVCTHLGCVVPWNASENKFMCPCH 129
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQYN +G+VVRGPAPL
Sbjct: 130 GSQYNAEGKVVRGPAPL 146
>sp|B8HNR1|UCRI_CYAP4 Cytochrome b6-f complex iron-sulfur subunit OS=Cyanothece sp.
(strain PCC 7425 / ATCC 29141) GN=petC PE=3 SV=1
Length = 179
Score = 181 bits (459), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 102/137 (74%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G+ + ML P +F PP G GGG AKDA+GNDI +D+
Sbjct: 10 VPDMGRRQFMNLLTFGSATGVALGMLYPVVRYFIPPASGGVGGGVVAKDALGNDISVSDF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L H DR L +GLKGDPTY+VV+ D T+ YG+NAVCTHLGCVVPWN +ENKFICPCH
Sbjct: 70 LAKHPANDRALAQGLKGDPTYIVVQDDHTIGDYGLNAVCTHLGCVVPWNISENKFICPCH 129
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQY+N G+VVRGPAPL
Sbjct: 130 GSQYDNTGKVVRGPAPL 146
>sp|Q5N5B0|UCRI_SYNP6 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=petC
PE=3 SV=1
Length = 179
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 103/140 (73%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++
Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVL 66
Query: 117 ADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFIC 176
+ +L H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF C
Sbjct: 67 SKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKC 126
Query: 177 PCHGSQYNNQGRVVRGPAPL 196
PCHGSQY+ G+VVRGPAPL
Sbjct: 127 PCHGSQYDATGKVVRGPAPL 146
>sp|Q31NV7|UCRI_SYNE7 Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus
elongatus (strain PCC 7942) GN=petC PE=3 SV=1
Length = 179
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 86/140 (61%), Positives = 103/140 (73%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A VP MG+RQ MNLL G+V+ L P +F PP G +GGG AKDA+GND++
Sbjct: 7 ASDVPSMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPSSGGSGGGVAAKDALGNDVVL 66
Query: 117 ADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFIC 176
+ +L H GDRTL +GLKGDPTYLVVE + + YGINAVCTHLGCVVPWN++ENKF C
Sbjct: 67 SKFLADHNVGDRTLVQGLKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKC 126
Query: 177 PCHGSQYNNQGRVVRGPAPL 196
PCHGSQY+ G+VVRGPAPL
Sbjct: 127 PCHGSQYDATGKVVRGPAPL 146
>sp|Q5CC92|UCRIB_CYAPA Cytochrome b6-f complex iron-sulfur subunit 2, cyanelle
OS=Cyanophora paradoxa GN=petC-2 PE=2 SV=1
Length = 241
Score = 177 bits (449), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 112/166 (67%), Gaps = 4/166 (2%)
Query: 32 KPARTQMVTKNPMGMKIKCQATSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATF 91
KP I C A S D VPDMGKR+LMNLLLLGA++ PT P+ +F
Sbjct: 45 KPVFAAAKAAKATTFSISCSAAS---DEVPDMGKRKLMNLLLLGAIAGPTIGAGGPFVSF 101
Query: 92 FAPP-GLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLA 150
PP G AG G AKDA GNDI WL T PGDR+L +GLKGD TYL+V++D TL
Sbjct: 102 LVPPKSGGGAGAGQAAKDAAGNDIKVEKWLETXKPGDRSLAQGLKGDATYLIVKEDGTLE 161
Query: 151 SYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPL 196
YG+NAVCTHLGCVVPWN +E KF+CPCHGSQY+ G+VVRGPAPL
Sbjct: 162 KYGLNAVCTHLGCVVPWNQSEGKFMCPCHGSQYDRTGKVVRGPAPL 207
>sp|Q46GW1|UCRI_PROMT Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL2A) GN=petC PE=3 SV=1
Length = 178
Score = 176 bits (446), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 105/144 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + VP MG+RQ MNLL G V+ L P A +F P G GGGT AKD +GN
Sbjct: 2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 NVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
K++CPCHGSQY++ G+VVRGPAPL
Sbjct: 122 KYMCPCHGSQYDSTGKVVRGPAPL 145
>sp|A2C0R9|UCRI_PROM1 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain NATL1A) GN=petC PE=3 SV=1
Length = 178
Score = 176 bits (446), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 105/144 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + VP MG+RQ MNLL G V+ L P A +F P G GGGT AKD +GN
Sbjct: 2 TQMTTADVPSMGRRQFMNLLTFGTVTGVALGALYPVAQYFTPYRAGGGGGGTNAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
++ A+ WL+TH GDR+L +GLKGDPTYL+VE + + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 NVSASGWLSTHPVGDRSLVQGLKGDPTYLIVEGEDAITSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
K++CPCHGSQY++ G+VVRGPAPL
Sbjct: 122 KYMCPCHGSQYDSTGKVVRGPAPL 145
>sp|Q93SX0|UCRIA_NOSS1 Cytochrome b6-f complex iron-sulfur subunit 1 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=petC1 PE=1 SV=1
Length = 179
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 102/136 (75%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPAAGGAGGGTTAKDELGNDVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCH
Sbjct: 70 LESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAP 195
GSQY+ G+VVRGPAP
Sbjct: 130 GSQYDATGKVVRGPAP 145
>sp|Q9L3P9|UCRIA_ANAVT Cytochrome b6-f complex iron-sulfur subunit 1 OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=petC PE=3
SV=1
Length = 179
Score = 174 bits (442), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/136 (63%), Positives = 102/136 (75%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVSKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L +H GDRTL +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCH
Sbjct: 70 LESHNVGDRTLVQGLKGDPTYIVVESKEAITDYGINAVCTHLGCVVPWNAAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAP 195
GSQY+ G+VVRGPAP
Sbjct: 130 GSQYDATGKVVRGPAP 145
>sp|Q7U566|UCRI_SYNPX Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain WH8102) GN=petC PE=3 SV=1
Length = 178
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 104/144 (72%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G+V+ L P +F PP AGGGTTAKD +GN
Sbjct: 2 TQLSSSDVPGMGRRQFMNLLTFGSVTGVALGALYPVVNYFIPPRAAGAGGGTTAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I A WL++H GDR+L +GLKGDPTYL+VE + SYGINA+CTHLGCVVPWNS N
Sbjct: 62 AITATGWLSSHPEGDRSLVQGLKGDPTYLIVEGPDAIGSYGINAICTHLGCVVPWNSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KF+CPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFMCPCHGSQYDATGKVVRGPAPL 145
>sp|P83794|UCRI_MASLA Cytochrome b6-f complex iron-sulfur subunit OS=Mastigocladus
laminosus GN=petC PE=1 SV=2
Length = 179
Score = 172 bits (436), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 102/137 (74%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G+ GGGTTAKD +GN++ + +
Sbjct: 10 VPDMGRRQFMNLLAFGTVTGVALGALYPLVKYFIPPSGGAVGGGTTAKDKLGNNVKVSKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L +H GDR L +GLKGDPTY+VVE + + YGINAVCTHLGCVVPWN+AENKF CPCH
Sbjct: 70 LESHNAGDRVLVQGLKGDPTYIVVESKEAIRDYGINAVCTHLGCVVPWNAAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQY+ G+V+RGPAPL
Sbjct: 130 GSQYDETGKVIRGPAPL 146
>sp|A9BE84|UCRI_PROM4 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9211) GN=petC PE=3 SV=1
Length = 178
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 103/141 (73%), Gaps = 1/141 (0%)
Query: 56 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDII 115
P+D VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN I
Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGNPIT 64
Query: 116 AADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFI 175
A+ WL+ H GDR+L +GLKGDPTYL+VE + + ++GINA+CTHLGCVVPWNS NK+I
Sbjct: 65 ASGWLSNHPAGDRSLVQGLKGDPTYLIVEGSEAIGNFGINAICTHLGCVVPWNSGANKYI 124
Query: 176 CPCHGSQYNNQGRVVRGPAPL 196
CPCHGSQY+ G+VVRGPAPL
Sbjct: 125 CPCHGSQYDANGKVVRGPAPL 145
>sp|P14698|UCRI_NOSSP Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc sp. (strain
PCC 7906) GN=petC PE=3 SV=1
Length = 179
Score = 169 bits (429), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 99/137 (72%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ + +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVKYFIPPASGGAGGGTTAKDELGNDVSLSKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L GDR L +GLKGDPTY+VVE + + YGINA+CTHLGCVVPWN AENKF CPCH
Sbjct: 70 LENRNAGDRALVQGLKGDPTYIVVENKQAIKDYGINAICTHLGCVVPWNVAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQY+ G+VVRGPAPL
Sbjct: 130 GSQYDETGKVVRGPAPL 146
>sp|B2J3K2|UCRI_NOSP7 Cytochrome b6-f complex iron-sulfur subunit OS=Nostoc punctiforme
(strain ATCC 29133 / PCC 73102) GN=petC PE=3 SV=1
Length = 179
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 98/137 (71%)
Query: 60 VPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADW 119
VPDMG+RQ MNLL G V+ L P +F PP G AGGGTTAKD +GND+ +
Sbjct: 10 VPDMGRRQFMNLLTFGTVTGVALGALYPVVNYFIPPATGGAGGGTTAKDELGNDVSVTKF 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L GDR L +GLKGDPTY+VV+ + + YGINA+CTHLGCVVPWN AENKF CPCH
Sbjct: 70 LENRNAGDRNLVQGLKGDPTYIVVDSKEAIKDYGINAICTHLGCVVPWNVAENKFKCPCH 129
Query: 180 GSQYNNQGRVVRGPAPL 196
GSQY+ G+VVRGPAPL
Sbjct: 130 GSQYDETGKVVRGPAPL 146
>sp|A2BPU5|UCRI_PROMS Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain AS9601) GN=petC PE=3 SV=1
Length = 178
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 100/144 (69%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KFICPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPL 145
>sp|Q7VDC0|UCRI_PROMA Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain SARG / CCMP1375 / SS120) GN=petC PE=3
SV=1
Length = 178
Score = 168 bits (425), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/141 (59%), Positives = 101/141 (71%), Gaps = 1/141 (0%)
Query: 56 PADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDII 115
P+D VP MG+RQ MNLL G + L P A FF P G GGTTAKD +GN +
Sbjct: 6 PSD-VPSMGRRQFMNLLTFGTATGVALGALYPVANFFMPLRAGGGTGGTTAKDELGNAVT 64
Query: 116 AADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFI 175
A WL+ H GDR+L +GLKGDPTYL+V+ D + ++GINA+CTHLGCVVPWNS NK+I
Sbjct: 65 ATGWLSNHPAGDRSLVQGLKGDPTYLIVDGDAAIGNFGINAICTHLGCVVPWNSGANKYI 124
Query: 176 CPCHGSQYNNQGRVVRGPAPL 196
CPCHGSQY+ G+VVRGPAPL
Sbjct: 125 CPCHGSQYDANGKVVRGPAPL 145
>sp|A3PBI5|UCRI_PROM0 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9301) GN=petC PE=3 SV=1
Length = 178
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 100/144 (69%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEVGEIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KFICPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPL 145
>sp|Q31C72|UCRI_PROM9 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9312) GN=petC PE=3 SV=1
Length = 178
Score = 167 bits (423), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/144 (55%), Positives = 100/144 (69%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PVTKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGEIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KFICPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPL 145
>sp|Q7V2L4|UCRI_PROMP Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus subsp. pastoris (strain CCMP1986 / MED4) GN=petC
PE=3 SV=1
Length = 178
Score = 167 bits (423), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 100/144 (69%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ WL +H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PVTKTGWLASHQAGDRSLVQGLKGDPTYLIVNSEGEIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KFICPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPL 145
>sp|A8G3H7|UCRI_PROM2 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9215) GN=petC PE=3 SV=1
Length = 178
Score = 166 bits (421), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/144 (56%), Positives = 99/144 (68%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + + VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSKDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
I WL TH GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PITKTGWLATHQAGDRSLVQGLKGDPTYLIVNEGGGIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KFICPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPL 145
>sp|A2BVC4|UCRI_PROM5 Cytochrome b6-f complex iron-sulfur subunit OS=Prochlorococcus
marinus (strain MIT 9515) GN=petC PE=3 SV=1
Length = 178
Score = 166 bits (420), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/144 (54%), Positives = 99/144 (68%)
Query: 53 TSIPADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGN 112
T + ++ VP MG+RQ MNLL G + L P A +F P G GGGT+AKD +GN
Sbjct: 2 TQLSSNDVPSMGRRQFMNLLTFGTATGVALGALYPVANYFMPLRAGGGGGGTSAKDELGN 61
Query: 113 DIIAADWLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAEN 172
+ WL H GDR+L +GLKGDPTYL+V + + +G+NA+CTHLGCVVPW+S N
Sbjct: 62 PVTKTGWLANHQAGDRSLVQGLKGDPTYLIVNSEGDIGEFGLNAICTHLGCVVPWDSGAN 121
Query: 173 KFICPCHGSQYNNQGRVVRGPAPL 196
KFICPCHGSQY+ G+VVRGPAPL
Sbjct: 122 KFICPCHGSQYDTNGKVVRGPAPL 145
>sp|Q2JUP1|UCRI_SYNJA Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain JA-3-3Ab) GN=petC PE=3 SV=1
Length = 172
Score = 150 bits (378), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
P M +R +N LL +V + L P +F PP G AG G A+DA+G I ++
Sbjct: 9 EAPPMSRRVFLNALLSSSVGVVVVGTLYPVVKYFIPPSSGGAGEGVIAQDALGKPISVSE 68
Query: 119 WLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPC 178
L TH DR L +GLKGDPTY+V++ + +A+YG+NAVCTHLGCVVPWN+ EN F CPC
Sbjct: 69 LLATHAATDRVLAQGLKGDPTYIVID-NGAVANYGLNAVCTHLGCVVPWNAGENLFKCPC 127
Query: 179 HGSQYNNQGRVVRGPAP 195
HGSQY G+V+RGPAP
Sbjct: 128 HGSQYAANGKVIRGPAP 144
>sp|Q7XYM4|UCRIA_BIGNA Cytochrome b6-f complex iron-sulfur subunit, chloroplastic
OS=Bigelowiella natans GN=petC PE=2 SV=1
Length = 252
Score = 149 bits (377), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 112/186 (60%), Gaps = 7/186 (3%)
Query: 14 QLCSSKGGMFCPSRAFLVKPARTQMVTKNPM---GMKIKCQATSIPADRVPDMGKRQLMN 70
QL + +G + P +F +R V++N + K QA D VPDMGKR+LMN
Sbjct: 36 QLSAVRGKIAAPRTSFQNAVSR---VSRNQLPSSSRKAVAQAFLSNPDMVPDMGKRKLMN 92
Query: 71 LLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAADWLNTHGPGDRTL 130
L+L AV+ Y +F PP G GG A DA+GN + A W +H R L
Sbjct: 93 NLVLAAVAPVVASAGGCYLYYFYPPQTGGGGGAVGALDALGNPVSAESWFKSHKKNARDL 152
Query: 131 TEGLKGDPTYLVVEKD-KTLASYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRV 189
+G+KGDPTYL+V D TL SYG+NA+CTHLGCVVPW++A NKF CPCHGSQY G V
Sbjct: 153 VQGIKGDPTYLIVNDDGSTLNSYGLNAICTHLGCVVPWDAASNKFKCPCHGSQYAPDGHV 212
Query: 190 VRGPAP 195
VRGPAP
Sbjct: 213 VRGPAP 218
>sp|Q2JL39|UCRI_SYNJB Cytochrome b6-f complex iron-sulfur subunit OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=petC PE=3 SV=1
Length = 172
Score = 148 bits (373), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 91/137 (66%), Gaps = 1/137 (0%)
Query: 59 RVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIAAD 118
P M +R L+N LL G+V + L P +F PP G G G A+DA+G I ++
Sbjct: 9 EAPPMSRRVLLNALLSGSVGVVVVGALYPVVKYFIPPSAGGGGEGLIAQDALGKPISVSE 68
Query: 119 WLNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPC 178
L TH DR L +GLKGDPTY+V++ + +A+YG+NAVCTHLGCVVPWN EN F CPC
Sbjct: 69 LLATHAATDRVLAQGLKGDPTYIVID-NGAVANYGLNAVCTHLGCVVPWNVGENLFKCPC 127
Query: 179 HGSQYNNQGRVVRGPAP 195
HGSQY G+V+RGPAP
Sbjct: 128 HGSQYAANGKVIRGPAP 144
>sp|Q7NCE1|UCRI_GLOVI Cytochrome b6-f complex iron-sulfur subunit OS=Gloeobacter
violaceus (strain PCC 7421) GN=petC PE=3 SV=1
Length = 186
Score = 124 bits (310), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 85/142 (59%), Gaps = 4/142 (2%)
Query: 57 ADRVPDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGSAGGGTTAKDAIGNDIIA 116
A +P M +RQL++ + GA++ T L P +F PP G G AKD G DI
Sbjct: 6 AQEIP-MSRRQLLSFVTGGAIAATTAATLYPVVLYFLPPSTAGGGEGVAAKDKEGKDISV 64
Query: 117 ADWLNTHGPGDRTLTEGLK---GDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENK 173
+ L PG+ LT GL GD TY+V+ K +A++GINAVCTHLGCVVPW++ +
Sbjct: 65 SKLLAAATPGEPVLTLGLDVNGGDATYIVINDQKEIANFGINAVCTHLGCVVPWDNGAKQ 124
Query: 174 FICPCHGSQYNNQGRVVRGPAP 195
F CPCHGS YN G + RGPAP
Sbjct: 125 FKCPCHGSVYNADGGLERGPAP 146
>sp|Q93SW8|UCRIB_NOSS1 Cytochrome b6-f complex iron-sulfur subunit 2 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=petC2 PE=3 SV=1
Length = 178
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/135 (45%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Query: 61 PDMGKRQLMNLLLLGAVSLPTGFMLVPYATFFAPPGLGS-AGGGTTAKDAIGNDIIAADW 119
P M +RQL+N V+ + P FF PP + A GG A+D IG+ I A+
Sbjct: 10 PSMSRRQLLNFFTGAIVATTASAAIYPATKFFMPPAESTDAEGGILAQDKIGHPIPASQI 69
Query: 120 LNTHGPGDRTLTEGLKGDPTYLVVEKDKTLASYGINAVCTHLGCVVPWNSAENKFICPCH 179
L G R L GL G+PTYL V +D TL GI CTHLGC PWN + +F CPCH
Sbjct: 70 L-AQASGTRALIAGLAGEPTYLTVREDGTLDPMGIVNNCTHLGCTFPWNPVDQQFQCPCH 128
Query: 180 GSQYNNQGRVVRGPA 194
GS+Y+ QG V RGPA
Sbjct: 129 GSRYDAQGSVERGPA 143
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,906,571
Number of Sequences: 539616
Number of extensions: 3287057
Number of successful extensions: 7371
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 7201
Number of HSP's gapped (non-prelim): 127
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)