BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028989
MESNLWSNRLSTASSRRYHHQSRSDLFIGGGYDETDGDDDLNAMFLCPFCAEDFDIVGLC
CHIDEDHPIEAKNGVCPVCAKRVGTDIVSHITMQHGNFFKIQRKRRLRRGGPNSTFSLLR
KELRDGNLQSLLGGSSCFVSSSNTEADPLLSSFIFNTPKVDEPLSVQPLSITEPTLVKES
SNENLHERYVNRHFYLFYCF

High Scoring Gene Products

Symbol, full name Information P value
HRB1
HYPERSENSITIVE TO RED AND BLUE
protein from Arabidopsis thaliana 6.7e-49
AT3G05700 protein from Arabidopsis thaliana 1.3e-45
AT5G26990 protein from Arabidopsis thaliana 3.2e-42
AT3G06760 protein from Arabidopsis thaliana 1.9e-35
AT1G02750 protein from Arabidopsis thaliana 4.1e-17
AT4G02200 protein from Arabidopsis thaliana 6.7e-17

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028989
        (200 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2155934 - symbol:HRB1 "HYPERSENSITIVE TO RED A...   510  6.7e-49   1
TAIR|locus:2078062 - symbol:AT3G05700 species:3702 "Arabi...   479  1.3e-45   1
TAIR|locus:2148528 - symbol:AT5G26990 species:3702 "Arabi...   447  3.2e-42   1
TAIR|locus:2083363 - symbol:AT3G06760 species:3702 "Arabi...   383  1.9e-35   1
TAIR|locus:2196125 - symbol:AT1G02750 species:3702 "Arabi...   210  4.1e-17   1
TAIR|locus:2137819 - symbol:AT4G02200 species:3702 "Arabi...   208  6.7e-17   1


>TAIR|locus:2155934 [details] [associations]
            symbol:HRB1 "HYPERSENSITIVE TO RED AND BLUE" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0009414 "response to water deprivation" evidence=ISS]
            [GO:0009785 "blue light signaling pathway" evidence=IMP]
            [GO:0010161 "red light signaling pathway" evidence=IMP]
            Pfam:PF05605 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
            EMBL:AB016872 GO:GO:0010161 GO:GO:0009785 HOGENOM:HOG000238690
            InterPro:IPR008598 EMBL:AF372963 EMBL:AY133584 IPI:IPI00542988
            RefSeq:NP_199734.2 UniGene:At.64279 STRING:Q9FJ17 PaxDb:Q9FJ17
            PRIDE:Q9FJ17 DNASU:834983 EnsemblPlants:AT5G49230.1 GeneID:834983
            KEGG:ath:AT5G49230 TAIR:At5g49230 eggNOG:NOG317145
            InParanoid:Q9FJ17 OMA:CADEFDI PhylomeDB:Q9FJ17
            ProtClustDB:CLSN2699160 Genevestigator:Q9FJ17 Uniprot:Q9FJ17
        Length = 211

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 108/195 (55%), Positives = 134/195 (68%)

Query:     1 MESNLWSNR----LSTASSRRYHHQSRSDLFIXXXXXXXXXXXXLNAMFLCPFCAEDFDI 56
             M+SN W N      S+ SSRRY  QSRSDL++            L A F+CPFCA++FDI
Sbjct:     1 MDSNSWINCPPVFSSSPSSRRY--QSRSDLYLGDVEGEDD----LKAEFMCPFCADEFDI 54

Query:    57 VGLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSHITMQHGNFFKIQRKRRLRRGGPNSTF 116
             VGLCCHID +HP+EAKNGVCPVC K+VG DIV HIT QHGN FK+QR+RRLR+GG +ST+
Sbjct:    55 VGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQHGNVFKVQRRRRLRKGGYSSTY 114

Query:   117 SLLRKELRDGNLQSLLGGSSCFVSSSNTEADPLLSSFIFNTPKV------DEPLSVQPLS 170
               L+KELR+ NLQSL GGSS F+ SSN ++DPLLSSF+F  P        D    V P  
Sbjct:   115 LTLKKELREANLQSL-GGSSTFIPSSNIDSDPLLSSFMFKPPSAIPITEGDSVAQVSPKD 173

Query:   171 ITEPTLVKES-SNEN 184
              ++  + +ES SNE+
Sbjct:   174 TSKSKIQQESFSNED 188


>TAIR|locus:2078062 [details] [associations]
            symbol:AT3G05700 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0009414 "response to water
            deprivation" evidence=ISS] Pfam:PF05605 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AC011620 HOGENOM:HOG000238690
            InterPro:IPR008598 EMBL:BT004008 EMBL:BT005154 IPI:IPI00522575
            RefSeq:NP_187221.2 UniGene:At.40625 EnsemblPlants:AT3G05700.1
            GeneID:819739 KEGG:ath:AT3G05700 TAIR:At3g05700 eggNOG:NOG242010
            InParanoid:Q84J70 OMA:HANIFKM PhylomeDB:Q84J70
            ProtClustDB:CLSN2916570 Genevestigator:Q84J70 Uniprot:Q84J70
        Length = 223

 Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
 Identities = 103/193 (53%), Positives = 128/193 (66%)

Query:     1 MESNLWSNRLSTASSRRYH--HQSRSDLFIXXXXXXXXXXXXLNAMFLCPFCAEDFDIVG 58
             M+S+ WS+RL++A+ RRY     SRSD F+                F CPFC++ FDIV 
Sbjct:     1 MDSDSWSDRLASAT-RRYQLAFPSRSDTFLGFEEIDGEEE--FREEFACPFCSDYFDIVS 57

Query:    59 LCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSHITMQHGNFFKIQRKRRLRRGGPNSTFSL 118
             LCCHIDEDHP+EAKNGVCPVCA RVG D+V+HIT+QH N FK+ RKR+ RRGG  ST S+
Sbjct:    58 LCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANIFKMHRKRKPRRGGSYSTLSI 117

Query:   119 LRKELRDGNLQSLLGGSSCFVSSS---NTEADPLLSSFIFNTPKVDEPLSVQPLSITEPT 175
             LR+E  DGN QSL GGSSC VSSS   N  ADPLLSSFI  +P  D   + +     E  
Sbjct:   118 LRREFPDGNFQSLFGGSSCIVSSSSSSNVAADPLLSSFI--SPIADGFFTTESCISAETG 175

Query:   176 LVKESSNENLHER 188
              VK+++ + L E+
Sbjct:   176 PVKKTTIQCLPEQ 188


>TAIR|locus:2148528 [details] [associations]
            symbol:AT5G26990 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0009414 "response to water
            deprivation" evidence=ISS] Pfam:PF05605 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AF007270 HOGENOM:HOG000238690
            InterPro:IPR008598 ProtClustDB:CLSN2916570 EMBL:BT011220
            EMBL:BT012151 IPI:IPI00528556 PIR:T01774 RefSeq:NP_198051.1
            UniGene:At.43013 EnsemblPlants:AT5G26990.1 GeneID:832757
            KEGG:ath:AT5G26990 TAIR:At5g26990 eggNOG:NOG318678
            InParanoid:Q6NM26 OMA:FREEYAC PhylomeDB:Q6NM26
            Genevestigator:Q6NM26 Uniprot:Q6NM26
        Length = 222

 Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
 Identities = 93/196 (47%), Positives = 128/196 (65%)

Query:     1 MESNLWSNRLSTASSRRYHHQ--SRSDLFIXXXXXXXXXXXXLNAMFLCPFCAEDFDIVG 58
             M+S+ WS+RL++AS RRY     SRSD F+                + CPFC++ FDIV 
Sbjct:     1 MDSDSWSDRLASAS-RRYQLDFLSRSDNFLGFEEIEGEDD--FREEYACPFCSDYFDIVS 57

Query:    59 LCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSHITMQHGNFFKIQRKRRLRRGGPNSTFSL 118
             LCCHIDEDHP++AKNGVCP+CA +V +D+++HIT+QH N FK+ RKR+ RRGG  S  S+
Sbjct:    58 LCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKRKSRRGGAQSMLSI 117

Query:   119 LRKELRDGNLQSLLGGSSCFVSSSNTE--ADPLLSSFIFNTPKVDEPLSVQPLSITEPTL 176
             L++E  DGN QSL  G+S  VSSS+    ADPLLSSFI  +P  D+    +     + + 
Sbjct:   118 LKREFPDGNFQSLFEGTSRAVSSSSASIAADPLLSSFI--SPMADDFFISESSLCADTSS 175

Query:   177 VKESSNENLHERYVNR 192
              K++ N++L ER V +
Sbjct:   176 AKKTLNQSLPERNVEK 191


>TAIR|locus:2083363 [details] [associations]
            symbol:AT3G06760 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0009414 "response to water
            deprivation" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM]
            Pfam:PF05605 EMBL:CP002686 InterPro:IPR008598 IPI:IPI00938908
            RefSeq:NP_001154594.1 UniGene:At.40468 PRIDE:F4JC45
            EnsemblPlants:AT3G06760.2 GeneID:819861 KEGG:ath:AT3G06760
            OMA:DATWPEV Uniprot:F4JC45
        Length = 234

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 94/205 (45%), Positives = 121/205 (59%)

Query:     1 MESNLWSNR---LSTASSRRYHHQSRSDLFIXXXXXXXXXXXXLNAMFLCPFCAEDFDIV 57
             M+SN W N     S++SS     QSRSDL++            L A F+CPFCAEDFDIV
Sbjct:     1 MDSN-WINCPSVFSSSSSSSRRCQSRSDLYLGGGYEDLEGEDDLKAEFICPFCAEDFDIV 59

Query:    58 GLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSHITMQHGNF--FKI--------QRKRRL 107
             GLCCHIDE+HP+EAKNGV    A  V             N   F++         R RRL
Sbjct:    60 GLCCHIDEEHPVEAKNGVDQFFALVVIQCCNFWFIPCESNLGIFRLFGRSVLYALRGRRL 119

Query:   108 RRGGPNSTFSLLRKELRDGNLQSLLGGSSCFVSSSNTEADPLLSSFIFNTPKVDEPL--S 165
             RRGG +ST+  L+KELR+ NLQSLLGGSS F SS+N ++DPLLSSF+FN+P V++    S
Sbjct:   120 RRGGYSSTYLALKKELREANLQSLLGGSSSFTSSTNIDSDPLLSSFMFNSPSVNQSANKS 179

Query:   166 VQPLSITEPTL---VKESSNENLHE 187
               P+++        +KES   ++ E
Sbjct:   180 ATPVTVGNAATKVSIKESLKRDIQE 204


>TAIR|locus:2196125 [details] [associations]
            symbol:AT1G02750 species:3702 "Arabidopsis thaliana"
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0009414 "response to water deprivation" evidence=ISS]
            [GO:0006914 "autophagy" evidence=RCA] InterPro:IPR015880
            SMART:SM00355 Pfam:PF05605 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005634 GO:GO:0005737 GO:GO:0008270 EMBL:AC022521
            EMBL:AC009525 EMBL:AK118790 EMBL:BT030081 IPI:IPI00521672
            RefSeq:NP_171775.2 UniGene:At.42581 STRING:Q8GWK1
            EnsemblPlants:AT1G02750.1 GeneID:839432 KEGG:ath:AT1G02750
            TAIR:At1g02750 eggNOG:NOG301878 HOGENOM:HOG000238690
            InParanoid:Q8GWK1 OMA:HITSHHR PhylomeDB:Q8GWK1
            ProtClustDB:CLSN2685726 Genevestigator:Q8GWK1 InterPro:IPR008598
            Uniprot:Q8GWK1
        Length = 221

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 61/185 (32%), Positives = 89/185 (48%)

Query:     1 MESNLWSNRLSTASSRRYHHQSRSDLF---IXXXXXXXXXXXXLNAMFLCPFCAEDFDIV 57
             ME ++W    S+ SSR Y  ++ +                   +   + CPFCA D+D+V
Sbjct:     1 MEDDMWCVS-SSGSSRSYRSETAAKYQSGPYQDLEEFEEVDDDIAVEYPCPFCASDYDLV 59

Query:    58 GLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSHITMQHGNFFKIQRKRRLRRGGPNSTFS 117
              LC HIDE+H  EA NG+CPVC+KRV   +V HIT  H +  K ++K    R  P     
Sbjct:    60 ELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHHRDVLKSEQKEMSYREDPY---- 115

Query:   118 LLRKELRDGNLQSLLGGSSCFVSSSNTEADPLLSSFIFNTPKVDEPLSVQP-LSITEPTL 176
             L  K L+  +L  L    +     S   +D  LS FI N+   ++   V P  S+ +   
Sbjct:   116 LSDKYLQP-HLDELPPSMNHHQHPSKHVSDQFLS-FINNSALPNQTKLVLPDSSVEDKNP 173

Query:   177 VKESS 181
             +K+SS
Sbjct:   174 IKDSS 178


>TAIR|locus:2137819 [details] [associations]
            symbol:AT4G02200 species:3702 "Arabidopsis thaliana"
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0009414 "response to water deprivation" evidence=ISS]
            InterPro:IPR015880 SMART:SM00355 Pfam:PF05605 EMBL:CP002687
            GO:GO:0008270 GO:GO:0005622 InterPro:IPR008598 IPI:IPI00938744
            RefSeq:NP_001154200.1 UniGene:At.48823 UniGene:At.73013
            EnsemblPlants:AT4G02200.3 GeneID:827516 KEGG:ath:AT4G02200
            OMA:DESYSAF Uniprot:F4JH94
        Length = 228

 Score = 208 (78.3 bits), Expect = 6.7e-17, P = 6.7e-17
 Identities = 56/148 (37%), Positives = 79/148 (53%)

Query:    47 CPFCAEDFDIVGLCCHIDEDHPIEAKNG--------------VCPVCAKRVGTDIVSHIT 92
             CPFC++D+D+V LC HIDE+H ++A NG              +CPVC++RV   +V HIT
Sbjct:    45 CPFCSDDYDLVELCHHIDEEHQLDANNGFLHEAVSCKFRLFIICPVCSRRVKMHMVDHIT 104

Query:    93 MQHGNFFKIQRKRRLRRGGPNSTFSLLRKELRDGNLQSLLGGSSCFVSSSNTEADPLLSS 152
              QH + FK     RL +    S FS   ++     LQSL+        +S +  DPLLS 
Sbjct:   105 TQHRDVFK-----RLYKDESYSAFSPGTRKY----LQSLIDEPLSTNHTSKSVLDPLLS- 154

Query:   153 FIFNTPKVDEPLSVQPLSITEPTLVKES 180
             FI+N P   +   VQP S +E ++   S
Sbjct:   155 FIYNPPSPKKSKLVQPDSSSEASMEDNS 182


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.137   0.423    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      200       188   0.00087  110 3  11 22  0.40    32
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  605 (64 KB)
  Total size of DFA:  173 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.18u 0.09s 18.27t   Elapsed:  00:00:01
  Total cpu time:  18.18u 0.09s 18.27t   Elapsed:  00:00:01
  Start:  Fri May 10 01:34:07 2013   End:  Fri May 10 01:34:08 2013

Back to top