Query 028989
Match_columns 200
No_of_seqs 142 out of 169
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 08:58:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028989.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028989hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2drp_A Protein (tramtrack DNA- 97.8 2.8E-05 9.6E-10 50.7 4.3 54 43-96 9-65 (66)
2 2ct1_A Transcriptional repress 97.8 2.9E-05 1E-09 52.3 4.5 54 44-97 15-71 (77)
3 3uk3_C Zinc finger protein 217 97.3 0.00018 6.3E-09 45.3 3.5 51 44-96 4-57 (57)
4 2yt9_A Zinc finger-containing 97.2 0.00044 1.5E-08 47.5 4.9 48 45-92 36-86 (95)
5 1x5w_A Zinc finger protein 64, 97.2 0.00041 1.4E-08 45.8 4.1 53 43-97 8-63 (70)
6 1x6h_A Transcriptional repress 97.1 0.00053 1.8E-08 46.1 4.4 54 44-97 15-73 (86)
7 1bbo_A Human enhancer-binding 97.0 0.0008 2.7E-08 42.2 4.2 50 45-96 2-54 (57)
8 1x6e_A Zinc finger protein 24; 97.0 0.00065 2.2E-08 45.1 4.0 51 44-96 14-67 (72)
9 2eod_A TNF receptor-associated 96.8 0.001 3.5E-08 43.7 3.8 48 43-93 9-59 (66)
10 2cot_A Zinc finger protein 435 96.7 0.0017 5.7E-08 43.5 4.4 52 43-96 17-71 (77)
11 2dmd_A Zinc finger protein 64, 96.7 0.0015 5E-08 44.9 4.1 47 45-93 9-58 (96)
12 2lce_A B-cell lymphoma 6 prote 96.7 0.0023 7.8E-08 42.5 4.8 53 42-96 15-70 (74)
13 2kmk_A Zinc finger protein GFI 96.7 0.0013 4.4E-08 43.7 3.5 50 44-95 29-81 (82)
14 2adr_A ADR1; transcription reg 96.7 0.0019 6.6E-08 40.9 4.2 51 44-96 2-55 (60)
15 2gqj_A Zinc finger protein KIA 96.7 0.00033 1.1E-08 49.8 0.4 53 44-97 24-80 (98)
16 2wbt_A B-129; zinc finger; 2.7 96.6 0.002 6.8E-08 47.0 4.4 50 44-97 74-126 (129)
17 2ctd_A Zinc finger protein 512 96.6 0.002 6.7E-08 46.4 4.3 50 44-96 34-87 (96)
18 1a1h_A QGSR zinc finger peptid 96.6 0.0019 6.4E-08 43.7 3.8 50 44-95 34-86 (90)
19 2ee8_A Protein ODD-skipped-rel 96.5 0.0031 1.1E-07 44.1 4.7 53 42-96 15-70 (106)
20 2rpc_A Zinc finger protein ZIC 96.5 0.0029 9.9E-08 47.2 4.8 57 40-96 21-87 (155)
21 2dlq_A GLI-kruppel family memb 96.5 0.0026 8.8E-08 45.2 4.2 53 44-96 35-91 (124)
22 2dlq_A GLI-kruppel family memb 96.5 0.0031 1.1E-07 44.8 4.6 48 44-93 7-57 (124)
23 2d9h_A Zinc finger protein 692 96.5 0.0014 4.7E-08 43.9 2.5 55 44-98 7-65 (78)
24 2ej4_A Zinc finger protein ZIC 96.4 0.0044 1.5E-07 42.5 5.0 55 42-96 23-87 (95)
25 2lv2_A Insulinoma-associated p 96.4 0.0031 1.1E-07 45.3 4.3 52 43-96 27-81 (85)
26 2dmd_A Zinc finger protein 64, 96.4 0.0048 1.6E-07 42.3 5.0 51 44-96 36-89 (96)
27 2kmk_A Zinc finger protein GFI 96.4 0.0024 8.3E-08 42.3 3.4 50 45-96 2-54 (82)
28 2csh_A Zinc finger protein 297 96.4 0.0039 1.3E-07 44.0 4.6 54 44-99 37-93 (110)
29 4gzn_C ZFP-57, zinc finger pro 96.4 0.0027 9.4E-08 42.8 3.6 49 44-94 4-55 (60)
30 2yt9_A Zinc finger-containing 96.3 0.0035 1.2E-07 42.9 3.8 53 43-97 6-61 (95)
31 2ee8_A Protein ODD-skipped-rel 96.2 0.0055 1.9E-07 42.8 4.6 51 44-96 45-98 (106)
32 1llm_C Chimera of ZIF23-GCN4; 96.2 0.0036 1.2E-07 42.8 3.3 54 44-99 3-59 (88)
33 2d9k_A FLN29 gene product; zin 95.8 0.0026 9.1E-08 44.0 1.2 48 43-93 16-64 (75)
34 1llm_C Chimera of ZIF23-GCN4; 95.7 0.0012 4.2E-08 45.3 -0.7 51 44-97 31-84 (88)
35 2ebt_A Krueppel-like factor 5; 95.7 0.014 4.7E-07 40.1 4.5 55 40-96 11-72 (100)
36 2dlk_A Novel protein; ZF-C2H2 95.6 0.012 4.1E-07 38.9 3.9 52 44-96 7-65 (79)
37 1wjp_A Zinc finger protein 295 95.5 0.0089 3E-07 42.2 3.1 45 44-92 16-63 (107)
38 1ubd_C Protein (YY1 zinc finge 95.5 0.016 5.5E-07 41.4 4.4 49 44-95 5-58 (124)
39 2gli_A Protein (five-finger GL 95.4 0.0084 2.9E-07 44.4 2.8 51 44-96 67-124 (155)
40 2eps_A POZ-, at HOOK-, and zin 95.4 0.016 5.5E-07 36.5 3.7 40 44-84 12-52 (54)
41 2lt7_A Transcriptional regulat 95.3 0.011 3.8E-07 45.0 3.3 49 43-93 21-72 (133)
42 1a1h_A QGSR zinc finger peptid 95.3 0.014 4.8E-07 39.3 3.3 51 44-96 4-59 (90)
43 1f2i_G Fusion of N-terminal 17 95.2 0.014 4.6E-07 38.3 3.1 49 43-93 18-71 (73)
44 2i13_A AART; DNA binding, zinc 95.2 0.012 4E-07 45.4 3.2 51 44-96 105-158 (190)
45 2ytn_A Zinc finger protein 347 95.2 0.02 6.9E-07 34.4 3.7 34 44-79 12-46 (46)
46 2epx_A Zinc finger protein 28 95.2 0.018 6.1E-07 34.5 3.4 35 44-79 12-47 (47)
47 2eq0_A Zinc finger protein 347 95.1 0.019 6.4E-07 34.5 3.3 34 44-79 12-46 (46)
48 2ghf_A ZHX1, zinc fingers and 95.1 0.019 6.6E-07 42.4 3.9 50 44-93 18-73 (102)
49 2ema_A Zinc finger protein 347 95.0 0.019 6.4E-07 34.5 3.1 34 44-79 12-46 (46)
50 2em0_A Zinc finger protein 224 95.0 0.022 7.5E-07 34.2 3.3 34 44-79 12-46 (46)
51 2el4_A Zinc finger protein 268 94.9 0.023 7.8E-07 34.0 3.3 34 44-79 12-46 (46)
52 2ene_A Zinc finger protein 347 94.9 0.024 8.1E-07 34.0 3.3 34 44-79 12-46 (46)
53 2eop_A Zinc finger protein 268 94.9 0.025 8.6E-07 33.8 3.3 34 44-79 12-46 (46)
54 1wjp_A Zinc finger protein 295 94.8 0.016 5.4E-07 40.8 2.7 50 44-96 42-94 (107)
55 2j7j_A Transcription factor II 94.8 0.019 6.5E-07 38.0 2.9 50 45-96 2-58 (85)
56 2eoq_A Zinc finger protein 224 94.8 0.028 9.7E-07 33.7 3.4 34 44-79 12-46 (46)
57 2ytj_A Zinc finger protein 484 94.8 0.027 9.4E-07 33.7 3.3 34 44-79 12-46 (46)
58 2csh_A Zinc finger protein 297 94.7 0.03 1E-06 39.4 3.9 50 44-96 10-62 (110)
59 2emf_A Zinc finger protein 484 94.7 0.032 1.1E-06 33.6 3.5 34 44-79 12-46 (46)
60 2ytk_A Zinc finger protein 347 94.7 0.027 9.4E-07 33.7 3.2 34 44-79 12-46 (46)
61 2gli_A Protein (five-finger GL 94.7 0.033 1.1E-06 41.1 4.2 53 44-96 3-64 (155)
62 2eme_A Zinc finger protein 473 94.6 0.035 1.2E-06 33.2 3.6 34 44-79 12-46 (46)
63 1tf6_A Protein (transcription 94.6 0.035 1.2E-06 42.7 4.4 53 44-96 72-131 (190)
64 2i13_A AART; DNA binding, zinc 94.6 0.023 7.8E-07 43.8 3.3 52 44-97 77-131 (190)
65 2eov_A Zinc finger protein 484 94.6 0.032 1.1E-06 33.3 3.3 34 44-79 12-46 (46)
66 2em9_A Zinc finger protein 224 94.6 0.034 1.2E-06 33.2 3.4 34 44-79 12-46 (46)
67 2ep2_A Zinc finger protein 484 94.6 0.033 1.1E-06 33.3 3.4 34 44-79 12-46 (46)
68 2enc_A Zinc finger protein 224 94.6 0.034 1.2E-06 33.3 3.4 34 44-79 12-46 (46)
69 1ubd_C Protein (YY1 zinc finge 94.5 0.039 1.3E-06 39.4 4.2 51 44-96 34-89 (124)
70 2j7j_A Transcription factor II 94.5 0.03 1E-06 37.0 3.4 47 44-95 31-85 (85)
71 2jp9_A Wilms tumor 1; DNA bind 94.5 0.027 9.3E-07 39.6 3.3 50 44-95 36-90 (119)
72 2em5_A ZFP-95, zinc finger pro 94.5 0.032 1.1E-06 33.5 3.2 34 44-79 12-46 (46)
73 2emy_A Zinc finger protein 268 94.5 0.033 1.1E-06 33.4 3.2 34 44-79 12-46 (46)
74 2epw_A Zinc finger protein 268 94.5 0.029 9.9E-07 33.5 2.9 34 44-79 12-46 (46)
75 2dmi_A Teashirt homolog 3; zin 94.5 0.015 5E-07 41.3 1.8 52 44-95 19-76 (115)
76 2ytq_A Zinc finger protein 268 94.4 0.038 1.3E-06 33.2 3.4 34 44-79 12-46 (46)
77 2epr_A POZ-, at HOOK-, and zin 94.4 0.031 1.1E-06 34.1 3.0 37 43-81 11-48 (48)
78 2ytd_A Zinc finger protein 473 94.4 0.035 1.2E-06 33.2 3.2 34 44-79 12-46 (46)
79 2em7_A Zinc finger protein 224 94.4 0.04 1.4E-06 33.0 3.5 34 44-79 12-46 (46)
80 2emk_A Zinc finger protein 28 94.4 0.036 1.2E-06 33.3 3.2 34 44-79 12-46 (46)
81 2eml_A Zinc finger protein 28 94.3 0.042 1.5E-06 32.9 3.4 34 44-79 12-46 (46)
82 2emh_A Zinc finger protein 484 94.3 0.029 9.9E-07 33.6 2.7 34 44-79 12-46 (46)
83 2ysp_A Zinc finger protein 224 94.3 0.03 1E-06 33.5 2.7 34 44-79 12-46 (46)
84 2en6_A Zinc finger protein 268 94.3 0.025 8.6E-07 33.9 2.3 34 44-79 12-46 (46)
85 2emm_A ZFP-95, zinc finger pro 94.2 0.039 1.3E-06 32.9 3.2 34 44-79 12-46 (46)
86 2eq4_A Zinc finger protein 224 94.2 0.043 1.5E-06 32.7 3.3 34 44-79 12-46 (46)
87 2eoe_A Zinc finger protein 347 94.2 0.035 1.2E-06 33.1 2.8 34 44-79 12-46 (46)
88 2dmi_A Teashirt homolog 3; zin 94.2 0.023 7.7E-07 40.3 2.2 53 42-96 48-105 (115)
89 2ytg_A ZFP-95, zinc finger pro 94.2 0.033 1.1E-06 33.4 2.7 34 44-79 12-46 (46)
90 2ytr_A Zinc finger protein 347 94.1 0.041 1.4E-06 32.8 3.1 34 44-79 12-46 (46)
91 2epz_A Zinc finger protein 28 94.1 0.046 1.6E-06 32.7 3.3 34 44-79 12-46 (46)
92 2ely_A Zinc finger protein 224 94.1 0.035 1.2E-06 33.3 2.8 34 44-79 12-46 (46)
93 2elz_A Zinc finger protein 224 94.1 0.047 1.6E-06 32.8 3.3 34 44-79 12-46 (46)
94 2wbs_A Krueppel-like factor 4; 94.0 0.048 1.7E-06 36.5 3.6 50 44-95 5-61 (89)
95 2ep0_A Zinc finger protein 28 94.0 0.046 1.6E-06 32.7 3.2 34 44-79 12-46 (46)
96 2el6_A Zinc finger protein 268 94.0 0.056 1.9E-06 32.4 3.6 34 44-79 12-46 (46)
97 2wbs_A Krueppel-like factor 4; 93.9 0.063 2.2E-06 35.9 4.1 49 43-93 34-87 (89)
98 2en8_A Zinc finger protein 224 93.9 0.054 1.8E-06 32.3 3.3 34 44-79 12-46 (46)
99 2yso_A ZFP-95, zinc finger pro 93.8 0.054 1.9E-06 32.4 3.2 34 44-79 12-46 (46)
100 2emx_A Zinc finger protein 268 93.8 0.055 1.9E-06 32.0 3.2 34 44-79 10-44 (44)
101 2emp_A Zinc finger protein 347 93.8 0.039 1.3E-06 33.0 2.5 34 44-79 12-46 (46)
102 2ebt_A Krueppel-like factor 5; 93.8 0.11 3.6E-06 35.5 5.0 50 44-95 45-99 (100)
103 2ep3_A Zinc finger protein 484 93.7 0.056 1.9E-06 32.3 3.2 34 44-79 12-46 (46)
104 2eoo_A ZFP-95, zinc finger pro 93.7 0.042 1.4E-06 33.0 2.6 34 44-79 12-46 (46)
105 2epq_A POZ-, at HOOK-, and zin 93.7 0.041 1.4E-06 32.9 2.5 35 44-80 10-45 (45)
106 2em8_A Zinc finger protein 224 93.7 0.041 1.4E-06 33.0 2.5 34 44-79 12-46 (46)
107 2ytm_A Zinc finger protein 28 93.5 0.042 1.4E-06 33.1 2.4 34 44-79 12-46 (46)
108 2em2_A Zinc finger protein 28 93.5 0.066 2.3E-06 32.1 3.3 34 44-79 12-46 (46)
109 2en1_A Zinc finger protein 224 93.5 0.06 2E-06 32.2 3.0 34 44-79 12-46 (46)
110 2lt7_A Transcriptional regulat 93.5 0.045 1.6E-06 41.5 2.9 52 44-97 50-104 (133)
111 2yu8_A Zinc finger protein 347 93.4 0.037 1.3E-06 33.1 1.9 34 44-79 12-46 (46)
112 2ytt_A Zinc finger protein 473 93.2 0.037 1.3E-06 33.2 1.7 34 44-79 12-46 (46)
113 2rpc_A Zinc finger protein ZIC 92.9 0.098 3.3E-06 38.8 4.0 51 44-96 62-117 (155)
114 2epa_A Krueppel-like factor 10 92.8 0.21 7.3E-06 32.4 5.2 50 41-92 14-70 (72)
115 2jp9_A Wilms tumor 1; DNA bind 92.6 0.095 3.3E-06 36.8 3.4 51 44-96 6-63 (119)
116 1tf6_A Protein (transcription 92.1 0.11 3.8E-06 39.9 3.5 51 44-96 104-161 (190)
117 3mjh_B Early endosome antigen 91.3 0.14 4.9E-06 32.0 2.7 27 44-70 5-32 (34)
118 2ysl_A Tripartite motif-contai 90.5 0.1 3.4E-06 34.9 1.5 48 39-86 15-70 (73)
119 2em3_A Zinc finger protein 28 90.3 0.21 7.1E-06 29.7 2.8 33 44-78 12-45 (46)
120 2ep1_A Zinc finger protein 484 90.0 0.28 9.5E-06 29.0 3.2 33 44-78 12-45 (46)
121 1vd4_A Transcription initiatio 89.5 0.2 6.8E-06 32.4 2.3 37 44-84 14-50 (62)
122 2yts_A Zinc finger protein 484 89.0 0.39 1.3E-05 28.3 3.3 33 44-78 12-45 (46)
123 2lv2_A Insulinoma-associated p 88.9 0.27 9.4E-06 35.0 2.9 29 44-72 56-85 (85)
124 2emg_A Zinc finger protein 484 88.8 0.39 1.3E-05 28.4 3.2 33 44-78 12-45 (46)
125 2emi_A Zinc finger protein 484 88.8 0.43 1.5E-05 28.2 3.4 33 44-78 12-45 (46)
126 2eow_A Zinc finger protein 347 88.8 0.38 1.3E-05 28.4 3.1 33 44-78 12-45 (46)
127 2ytf_A Zinc finger protein 268 88.7 0.41 1.4E-05 28.2 3.2 33 44-78 12-45 (46)
128 2enf_A Zinc finger protein 347 88.7 0.42 1.4E-05 28.3 3.3 33 44-78 12-45 (46)
129 1zw8_A Zinc-responsive transcr 88.7 0.58 2E-05 31.7 4.3 51 45-95 2-64 (64)
130 2ctu_A Zinc finger protein 483 88.7 0.021 7.3E-07 36.7 -2.9 43 44-95 18-63 (73)
131 2emj_A Zinc finger protein 28 88.6 0.4 1.4E-05 28.5 3.1 33 44-78 12-45 (46)
132 2dlk_A Novel protein; ZF-C2H2 88.4 0.34 1.2E-05 31.6 3.0 37 44-82 38-77 (79)
133 2yti_A Zinc finger protein 347 88.4 0.39 1.3E-05 28.4 3.0 33 44-78 12-45 (46)
134 2em4_A Zinc finger protein 28 88.4 0.42 1.4E-05 28.4 3.1 33 44-78 12-45 (46)
135 2eq2_A Zinc finger protein 347 88.3 0.5 1.7E-05 27.9 3.4 33 44-78 12-45 (46)
136 2ytp_A Zinc finger protein 484 88.3 0.43 1.5E-05 28.3 3.1 33 44-78 12-45 (46)
137 2eon_A ZFP-95, zinc finger pro 88.2 0.43 1.5E-05 28.4 3.1 33 44-78 12-45 (46)
138 2yrj_A Zinc finger protein 473 88.0 0.45 1.5E-05 28.1 3.1 33 44-78 12-45 (46)
139 2yth_A Zinc finger protein 224 88.0 0.52 1.8E-05 28.0 3.3 33 44-78 12-45 (46)
140 2eq1_A Zinc finger protein 347 87.9 0.47 1.6E-05 28.0 3.2 33 44-78 12-45 (46)
141 2yrm_A B-cell lymphoma 6 prote 87.6 0.53 1.8E-05 27.7 3.2 33 44-78 10-43 (43)
142 1t1h_A Gspef-atpub14, armadill 87.5 0.19 6.6E-06 34.1 1.3 47 38-85 2-55 (78)
143 2en9_A Zinc finger protein 28 87.4 0.54 1.9E-05 27.9 3.2 33 44-78 12-45 (46)
144 2eor_A Zinc finger protein 224 87.3 0.36 1.2E-05 28.5 2.3 33 44-78 12-45 (46)
145 2egp_A Tripartite motif-contai 87.0 0.35 1.2E-05 32.6 2.4 47 39-85 7-65 (79)
146 2kr4_A Ubiquitin conjugation f 87.0 0.71 2.4E-05 32.6 4.1 40 39-85 9-60 (85)
147 2epu_A Zinc finger protein 32; 86.7 0.47 1.6E-05 28.0 2.6 33 44-78 12-45 (45)
148 1paa_A Yeast transcription fac 86.7 0.44 1.5E-05 25.1 2.3 26 44-69 2-28 (30)
149 2eoz_A Zinc finger protein 473 86.6 0.46 1.6E-05 28.2 2.5 33 44-78 12-45 (46)
150 2csy_A Zinc finger protein 183 86.6 0.14 4.8E-06 35.2 0.2 46 38-85 9-61 (81)
151 1wge_A Hypothetical protein 26 86.5 0.3 1E-05 36.0 1.9 45 31-84 16-63 (83)
152 2el5_A Zinc finger protein 268 86.1 0.78 2.7E-05 26.4 3.4 32 44-77 10-42 (42)
153 2em6_A Zinc finger protein 224 85.6 0.76 2.6E-05 27.2 3.2 33 44-78 12-45 (46)
154 1wgm_A Ubiquitin conjugation f 85.3 0.75 2.6E-05 33.6 3.6 40 39-85 17-69 (98)
155 2eoy_A Zinc finger protein 473 85.3 0.68 2.3E-05 27.4 2.8 34 44-78 12-46 (46)
156 2jr7_A DPH3 homolog; DESR1, CS 85.1 0.32 1.1E-05 36.3 1.5 46 31-85 9-57 (89)
157 2ct1_A Transcriptional repress 85.0 0.63 2.2E-05 30.5 2.8 29 43-71 44-73 (77)
158 2ent_A Krueppel-like factor 15 85.0 0.85 2.9E-05 26.9 3.2 34 44-79 12-48 (48)
159 2ecj_A Tripartite motif-contai 84.8 0.56 1.9E-05 29.7 2.4 18 39-56 10-27 (58)
160 2eom_A ZFP-95, zinc finger pro 84.8 0.82 2.8E-05 27.1 3.0 33 44-78 12-45 (46)
161 1x6h_A Transcriptional repress 84.7 0.93 3.2E-05 29.8 3.6 38 43-82 46-84 (86)
162 2adr_A ADR1; transcription reg 84.3 0.8 2.8E-05 28.4 3.0 28 44-71 30-58 (60)
163 2kre_A Ubiquitin conjugation f 84.2 1.3 4.5E-05 32.4 4.5 40 39-85 24-75 (100)
164 1wir_A Protein arginine N-meth 84.1 0.91 3.1E-05 35.4 3.7 34 40-73 11-45 (121)
165 1klr_A Zinc finger Y-chromosom 84.1 0.7 2.4E-05 23.9 2.3 23 45-67 3-26 (30)
166 3ztg_A E3 ubiquitin-protein li 83.9 0.11 3.9E-06 36.4 -1.4 46 38-83 7-60 (92)
167 2eof_A Zinc finger protein 268 83.8 1 3.5E-05 26.0 3.1 32 44-77 12-44 (44)
168 3hcs_A TNF receptor-associated 83.1 0.93 3.2E-05 35.2 3.5 45 44-91 82-129 (170)
169 2emz_A ZFP-95, zinc finger pro 83.0 0.56 1.9E-05 27.8 1.7 33 44-78 12-45 (46)
170 2eoh_A Zinc finger protein 28 82.8 1.1 3.8E-05 26.4 3.0 32 44-77 12-44 (46)
171 2eq3_A Zinc finger protein 347 82.4 0.89 3E-05 26.7 2.5 33 44-78 12-45 (46)
172 1yop_A KTI11P; zinc finger, me 82.4 0.36 1.2E-05 35.5 0.8 44 32-84 10-56 (83)
173 2en7_A Zinc finger protein 268 82.2 1.2 4.2E-05 25.7 3.0 32 44-77 12-44 (44)
174 2enh_A Zinc finger protein 28 82.2 1.2 4.1E-05 26.3 3.0 33 44-78 12-45 (46)
175 2yte_A Zinc finger protein 473 82.1 1.5 5.2E-05 25.0 3.4 31 44-76 10-41 (42)
176 2ysj_A Tripartite motif-contai 82.0 0.41 1.4E-05 31.2 0.9 17 39-55 15-31 (63)
177 6rxn_A Rubredoxin; electron tr 82.0 0.61 2.1E-05 30.8 1.7 35 43-82 3-39 (46)
178 2emb_A Zinc finger protein 473 82.0 1.5 5E-05 25.5 3.3 32 44-77 12-44 (44)
179 2yto_A Zinc finger protein 484 81.5 1.3 4.3E-05 26.2 3.0 32 44-77 12-44 (46)
180 1ard_A Yeast transcription fac 81.5 1.1 3.7E-05 23.2 2.3 22 44-65 2-24 (29)
181 3uk3_C Zinc finger protein 217 81.0 0.91 3.1E-05 27.7 2.2 24 44-67 32-56 (57)
182 2ecw_A Tripartite motif-contai 80.8 0.34 1.2E-05 32.7 0.2 47 39-85 14-71 (85)
183 2ect_A Ring finger protein 126 80.4 0.38 1.3E-05 32.6 0.3 47 39-85 10-64 (78)
184 2els_A Zinc finger protein 406 80.1 1.1 3.8E-05 24.8 2.2 23 44-66 9-32 (36)
185 2ct2_A Tripartite motif protei 79.8 1.7 5.8E-05 29.6 3.5 48 39-86 10-69 (88)
186 2kvh_A Zinc finger and BTB dom 79.7 1.3 4.5E-05 22.9 2.3 22 44-65 3-25 (27)
187 2f42_A STIP1 homology and U-bo 79.6 2 6.9E-05 35.1 4.5 42 38-85 100-153 (179)
188 1znf_A 31ST zinc finger from X 79.3 1.6 5.4E-05 22.2 2.6 21 45-65 2-23 (27)
189 2yu5_A Zinc finger protein 473 79.3 1.5 5E-05 25.5 2.7 31 44-76 12-43 (44)
190 2drp_A Protein (tramtrack DNA- 79.2 1.1 3.7E-05 28.3 2.2 25 44-68 40-65 (66)
191 2eou_A Zinc finger protein 473 79.2 1.8 6E-05 25.2 3.0 32 44-77 12-44 (44)
192 2eoj_A Zinc finger protein 268 79.0 1.3 4.4E-05 25.7 2.3 32 44-77 12-44 (44)
193 1e4u_A Transcriptional repress 79.0 0.79 2.7E-05 32.3 1.6 43 42-85 9-62 (78)
194 2ecv_A Tripartite motif-contai 78.9 0.3 1E-05 33.0 -0.6 47 39-85 14-71 (85)
195 2m0d_A Zinc finger and BTB dom 78.9 1.4 4.8E-05 22.7 2.3 22 44-65 3-25 (30)
196 2d9h_A Zinc finger protein 692 78.6 1.8 6E-05 28.3 3.1 29 44-72 38-67 (78)
197 1rik_A E6APC1 peptide; E6-bind 78.4 1.1 3.8E-05 23.2 1.8 21 45-65 3-24 (29)
198 2elx_A Zinc finger protein 406 78.2 1.5 5.1E-05 23.8 2.3 23 44-66 7-30 (35)
199 2m0f_A Zinc finger and BTB dom 77.7 1.4 4.9E-05 22.6 2.1 22 44-65 2-24 (29)
200 3iuf_A Zinc finger protein UBI 77.6 1.6 5.5E-05 26.5 2.6 29 44-72 7-36 (48)
201 2elp_A Zinc finger protein 406 77.5 1 3.5E-05 25.1 1.5 22 44-65 9-32 (37)
202 1p7a_A BF3, BKLF, kruppel-like 77.5 1.8 6.2E-05 24.0 2.6 22 44-65 11-33 (37)
203 2ept_A Zinc finger protein 32; 76.8 2.5 8.7E-05 24.0 3.2 22 44-65 10-32 (41)
204 2ytb_A Zinc finger protein 32; 76.6 2.3 7.8E-05 24.2 2.9 22 44-65 11-33 (42)
205 2ecy_A TNF receptor-associated 76.6 1.3 4.5E-05 29.0 2.1 47 39-86 10-63 (66)
206 1srk_A Zinc finger protein ZFP 76.1 2 7E-05 23.4 2.5 23 44-66 7-30 (35)
207 2elq_A Zinc finger protein 406 75.8 1.9 6.4E-05 23.8 2.3 22 44-65 9-31 (36)
208 2elm_A Zinc finger protein 406 75.8 2.1 7E-05 24.1 2.5 25 44-68 9-34 (37)
209 2elt_A Zinc finger protein 406 75.6 1.8 6.2E-05 23.7 2.2 22 44-65 9-31 (36)
210 2d8t_A Dactylidin, ring finger 75.6 2.5 8.5E-05 28.1 3.3 46 41-88 12-64 (71)
211 2kvf_A Zinc finger and BTB dom 75.4 1.9 6.6E-05 22.2 2.2 22 44-65 3-25 (28)
212 2kiz_A E3 ubiquitin-protein li 75.2 3.8 0.00013 26.8 4.1 48 39-86 9-64 (69)
213 2elo_A Zinc finger protein 406 75.0 1.4 4.7E-05 24.5 1.6 24 44-67 9-33 (37)
214 2en3_A ZFP-95, zinc finger pro 74.4 1.1 3.8E-05 26.3 1.1 22 44-65 12-34 (46)
215 2djb_A Polycomb group ring fin 74.3 0.62 2.1E-05 31.2 -0.1 45 39-85 10-62 (72)
216 2yuc_A TNF receptor-associated 74.2 1.4 4.6E-05 30.0 1.7 46 44-91 16-63 (76)
217 1twf_L ABC10-alpha, DNA-direct 74.2 1.3 4.5E-05 31.4 1.7 30 41-82 25-54 (70)
218 1x5w_A Zinc finger protein 64, 74.1 1.9 6.5E-05 27.6 2.3 27 44-70 37-64 (70)
219 3pwf_A Rubrerythrin; non heme 74.0 1.6 5.3E-05 35.3 2.2 27 42-82 136-162 (170)
220 2m0e_A Zinc finger and BTB dom 73.7 1.9 6.3E-05 22.0 1.8 19 45-63 3-22 (29)
221 2kvg_A Zinc finger and BTB dom 73.7 1.7 5.9E-05 22.6 1.7 22 44-65 3-25 (27)
222 1bbo_A Human enhancer-binding 73.6 2 6.7E-05 26.1 2.2 25 44-68 29-54 (57)
223 2epc_A Zinc finger protein 32; 73.6 3.2 0.00011 23.6 3.0 22 44-65 11-33 (42)
224 2ea6_A Ring finger protein 4; 73.3 0.81 2.8E-05 29.7 0.3 43 40-84 11-67 (69)
225 2elr_A Zinc finger protein 406 73.0 2.4 8.4E-05 23.1 2.3 22 44-65 9-31 (36)
226 3htk_C E3 SUMO-protein ligase 72.5 1.3 4.5E-05 38.8 1.5 44 41-84 178-231 (267)
227 2lvr_A Zinc finger and BTB dom 74.7 0.76 2.6E-05 24.0 0.0 22 44-65 3-25 (30)
228 2yur_A Retinoblastoma-binding 71.5 0.57 1.9E-05 31.8 -0.8 45 38-82 9-61 (74)
229 1wii_A Hypothetical UPF0222 pr 71.3 1.2 4.1E-05 32.8 0.9 35 41-82 20-56 (85)
230 2c2l_A CHIP, carboxy terminus 70.8 4.2 0.00014 32.9 4.1 41 39-85 203-255 (281)
231 1rim_A E6APC2 peptide; E6-bind 70.7 2.8 9.6E-05 23.1 2.2 21 45-65 3-24 (33)
232 2lcq_A Putative toxin VAPC6; P 70.7 1.2 4.1E-05 34.9 0.8 29 42-83 130-158 (165)
233 2elu_A Zinc finger protein 406 70.6 2.1 7.1E-05 27.0 1.7 24 46-69 11-35 (37)
234 1bor_A Transcription factor PM 70.3 1.5 5.3E-05 28.2 1.2 42 43-84 5-48 (56)
235 2eos_A B-cell lymphoma 6 prote 70.2 3.9 0.00013 23.3 2.9 22 44-65 11-33 (42)
236 3fl2_A E3 ubiquitin-protein li 69.0 0.43 1.5E-05 35.4 -2.0 44 41-85 49-99 (124)
237 2lvt_A Zinc finger and BTB dom 71.6 1 3.5E-05 23.5 0.0 21 45-65 3-24 (29)
238 2lvu_A Zinc finger and BTB dom 71.3 1.1 3.6E-05 23.0 0.0 21 45-65 3-24 (26)
239 3l11_A E3 ubiquitin-protein li 68.1 2.9 0.0001 30.2 2.4 45 40-85 11-62 (115)
240 2ghf_A ZHX1, zinc fingers and 68.0 2.5 8.6E-05 30.8 2.0 38 44-82 50-88 (102)
241 2elv_A Zinc finger protein 406 67.7 3.6 0.00012 22.6 2.2 22 44-65 9-31 (36)
242 1x6e_A Zinc finger protein 24; 67.7 3.1 0.00011 26.8 2.2 24 44-67 42-66 (72)
243 1njq_A Superman protein; zinc- 67.5 3.6 0.00012 23.2 2.3 22 44-65 6-28 (39)
244 2epv_A Zinc finger protein 268 67.0 4.2 0.00014 23.6 2.5 23 44-66 12-35 (44)
245 1lko_A Rubrerythrin all-iron(I 66.7 1.4 4.6E-05 35.9 0.3 28 42-82 153-180 (191)
246 2cot_A Zinc finger protein 435 65.6 5.3 0.00018 25.9 3.1 23 44-66 46-69 (77)
247 2en2_A B-cell lymphoma 6 prote 64.8 3.8 0.00013 23.3 2.0 22 44-65 11-33 (42)
248 2i5o_A DNA polymerase ETA; zin 63.4 3.6 0.00012 26.2 1.8 24 42-65 7-30 (39)
249 2k5c_A Uncharacterized protein 62.8 2.2 7.7E-05 31.9 0.9 12 44-55 51-62 (95)
250 2ecn_A Ring finger protein 141 62.7 2.5 8.7E-05 27.7 1.1 43 40-84 11-59 (70)
251 2gqj_A Zinc finger protein KIA 62.1 3.9 0.00013 28.3 2.0 26 44-69 54-80 (98)
252 1ffk_W Ribosomal protein L37AE 61.9 1.7 5.7E-05 31.3 0.0 16 38-53 21-36 (73)
253 1vq8_Z 50S ribosomal protein L 61.4 2 6.8E-05 31.4 0.4 32 40-84 23-56 (83)
254 2ep4_A Ring finger protein 24; 61.4 2.2 7.4E-05 28.4 0.5 43 40-84 11-63 (74)
255 1yuz_A Nigerythrin; rubrythrin 61.2 3.5 0.00012 34.0 1.9 28 42-83 169-196 (202)
256 1iym_A EL5; ring-H2 finger, ub 61.2 0.59 2E-05 29.4 -2.3 11 73-83 43-53 (55)
257 3jyw_9 60S ribosomal protein L 60.6 2.2 7.4E-05 30.7 0.4 15 39-53 21-35 (72)
258 3flo_B DNA polymerase alpha ca 60.5 1.4 4.9E-05 36.9 -0.6 55 42-99 20-76 (206)
259 2ct5_A Zinc finger BED domain 60.5 4.1 0.00014 29.0 1.9 29 73-101 29-62 (73)
260 2czr_A TBP-interacting protein 60.4 3.4 0.00011 35.2 1.6 27 40-66 150-176 (226)
261 1yui_A GAGA-factor; complex (D 60.4 5.2 0.00018 24.4 2.2 23 44-66 24-47 (54)
262 3j21_i 50S ribosomal protein L 60.1 2.2 7.7E-05 31.4 0.5 15 39-53 30-44 (83)
263 2l6l_A DNAJ homolog subfamily 59.8 2.2 7.5E-05 33.1 0.4 41 41-91 109-151 (155)
264 2epp_A POZ-, at HOOK-, and zin 59.4 7.7 0.00026 26.3 3.1 23 44-66 13-36 (66)
265 2eox_A Zinc finger protein 473 59.3 4.6 0.00016 23.3 1.7 22 44-65 12-34 (44)
266 2y43_A E3 ubiquitin-protein li 58.5 0.82 2.8E-05 32.4 -2.1 44 40-85 18-69 (99)
267 2xeu_A Ring finger protein 4; 58.2 1.3 4.5E-05 28.3 -1.0 40 44-85 3-56 (64)
268 1z6u_A NP95-like ring finger p 58.2 0.95 3.3E-05 35.3 -2.0 45 41-86 75-126 (150)
269 3hct_A TNF receptor-associated 58.0 14 0.00046 26.9 4.5 47 39-86 13-66 (118)
270 2yuc_A TNF receptor-associated 57.7 7 0.00024 26.3 2.7 32 43-77 43-74 (76)
271 3iz5_m 60S ribosomal protein L 57.0 2.7 9.3E-05 31.5 0.4 15 39-53 31-45 (92)
272 2kdx_A HYPA, hydrogenase/ureas 56.5 4.5 0.00015 30.3 1.6 30 40-82 69-99 (119)
273 2ckl_A Polycomb group ring fin 56.4 1.3 4.3E-05 32.0 -1.4 44 40-85 11-62 (108)
274 3izc_m 60S ribosomal protein R 56.4 2.7 9.4E-05 31.5 0.4 15 39-53 31-45 (92)
275 4gzn_C ZFP-57, zinc finger pro 56.3 7.9 0.00027 25.4 2.7 26 44-70 32-58 (60)
276 2lce_A B-cell lymphoma 6 prote 56.3 6.5 0.00022 25.3 2.2 24 44-67 45-69 (74)
277 3lrq_A E3 ubiquitin-protein li 56.1 1 3.4E-05 32.4 -2.0 45 40-85 18-70 (100)
278 1e8j_A Rubredoxin; iron-sulfur 56.0 6.1 0.00021 26.3 2.0 14 39-52 31-44 (52)
279 1sp2_A SP1F2; zinc finger, tra 55.7 8.6 0.00029 20.2 2.3 21 45-65 3-26 (31)
280 4a17_Y RPL37A, 60S ribosomal p 54.7 3 0.0001 31.9 0.4 15 39-53 31-45 (103)
281 2l0b_A E3 ubiquitin-protein li 54.6 0.96 3.3E-05 31.9 -2.3 42 42-85 38-89 (91)
282 1v87_A Deltex protein 2; ring- 53.7 0.83 2.8E-05 33.0 -2.8 13 72-84 81-93 (114)
283 2ckl_B Ubiquitin ligase protei 53.1 0.47 1.6E-05 36.9 -4.5 44 40-84 50-101 (165)
284 3cc2_Z 50S ribosomal protein L 52.6 3.4 0.00012 32.2 0.4 34 39-84 55-89 (116)
285 1wim_A KIAA0161 protein; ring 52.5 2.4 8.2E-05 29.9 -0.5 48 44-91 5-72 (94)
286 2ab3_A ZNF29; zinc finger prot 51.7 9.5 0.00033 19.2 2.0 21 45-65 3-26 (29)
287 2wbt_A B-129; zinc finger; 2.7 51.5 9.8 0.00033 26.9 2.7 26 44-69 100-126 (129)
288 1x4j_A Ring finger protein 38; 51.5 1.1 3.7E-05 30.2 -2.4 42 43-84 22-71 (75)
289 2kfq_A FP1; protein, de novo p 51.4 2.9 0.0001 22.8 -0.1 21 45-65 3-24 (32)
290 1jm7_A BRCA1, breast cancer ty 51.3 1.3 4.6E-05 31.5 -2.0 45 41-85 18-70 (112)
291 2a25_A Ubiquitin ligase SIAH1; 51.2 6.1 0.00021 32.1 1.7 11 86-96 54-64 (193)
292 2e72_A POGO transposable eleme 50.8 8.4 0.00029 25.9 2.0 24 43-66 11-35 (49)
293 2eln_A Zinc finger protein 406 49.7 13 0.00044 22.3 2.6 23 44-66 9-34 (38)
294 2ctd_A Zinc finger protein 512 49.5 12 0.0004 26.2 2.8 26 44-69 62-88 (96)
295 2jvx_A NF-kappa-B essential mo 49.2 12 0.0004 22.3 2.3 23 43-65 2-25 (28)
296 2l7x_A Envelope glycoprotein; 49.0 5.7 0.0002 28.8 1.1 21 44-64 30-50 (77)
297 3ng2_A RNF4, snurf, ring finge 48.3 7.9 0.00027 25.1 1.6 41 44-86 10-64 (71)
298 1jm7_B BARD1, BRCA1-associated 46.3 1.9 6.4E-05 31.7 -1.9 44 41-84 19-66 (117)
299 1zfd_A SWI5; DNA binding motif 44.7 14 0.00049 19.3 2.1 22 44-65 3-27 (32)
300 1va1_A Transcription factor SP 41.9 16 0.00053 20.2 2.0 22 44-65 8-32 (37)
301 4ayb_P DNA-directed RNA polyme 41.8 14 0.00049 24.7 2.1 11 42-52 21-31 (48)
302 1g25_A CDK-activating kinase a 41.5 2.4 8.1E-05 27.6 -1.9 41 44-85 3-55 (65)
303 3sp4_A Aprataxin-like protein; 41.1 13 0.00046 31.0 2.3 25 42-66 167-193 (204)
304 2ea5_A Cell growth regulator w 40.7 7.6 0.00026 26.2 0.6 42 43-85 14-58 (68)
305 1fv5_A First zinc finger of U- 39.0 13 0.00043 22.3 1.4 20 44-63 8-28 (36)
306 1rmd_A RAG1; V(D)J recombinati 38.8 14 0.00049 26.5 1.9 46 39-85 18-70 (116)
307 4ic3_A E3 ubiquitin-protein li 38.1 4.5 0.00015 27.4 -0.9 39 41-85 21-67 (74)
308 3knv_A TNF receptor-associated 37.8 3.3 0.00011 31.9 -1.8 44 39-83 26-76 (141)
309 4ap4_A E3 ubiquitin ligase RNF 37.7 9.4 0.00032 27.3 0.7 35 45-84 49-83 (133)
310 2akl_A PHNA-like protein PA012 37.5 11 0.00037 30.2 1.1 26 45-82 28-53 (138)
311 1l8d_A DNA double-strand break 37.3 16 0.00053 26.6 1.9 11 46-56 49-59 (112)
312 1bhi_A CRE-BP1, ATF-2; CRE bin 37.3 21 0.00072 19.5 2.1 22 44-65 6-30 (38)
313 1dx8_A Rubredoxin; electron tr 36.7 12 0.00041 26.3 1.1 13 40-52 36-48 (70)
314 3a43_A HYPD, hydrogenase nicke 36.5 6.4 0.00022 30.6 -0.4 19 40-58 66-84 (139)
315 3h0g_L DNA-directed RNA polyme 35.9 17 0.00058 25.3 1.8 30 42-83 19-48 (63)
316 4a0k_B E3 ubiquitin-protein li 35.6 7.8 0.00027 29.5 0.0 37 46-82 50-109 (117)
317 2qgp_A HNH endonuclease; Q39X4 34.2 4.1 0.00014 30.5 -1.8 43 42-84 33-81 (112)
318 2djr_A Zinc finger BED domain- 33.0 9.3 0.00032 27.4 0.0 16 85-100 49-64 (76)
319 4ayc_A E3 ubiquitin-protein li 32.2 3.2 0.00011 31.3 -2.7 41 42-84 51-98 (138)
320 3mv2_A Coatomer subunit alpha; 32.1 18 0.00062 32.4 1.8 33 42-87 285-318 (325)
321 1x3c_A Zinc finger protein 292 32.0 31 0.0011 24.7 2.7 32 44-76 27-61 (73)
322 1pft_A TFIIB, PFTFIIBN; N-term 31.6 8.8 0.0003 24.4 -0.3 34 44-88 5-39 (50)
323 1yk4_A Rubredoxin, RD; electro 31.1 14 0.00048 24.5 0.7 14 39-52 30-43 (52)
324 2v3b_B Rubredoxin 2, rubredoxi 30.7 14 0.00048 24.7 0.7 13 40-52 32-44 (55)
325 4dvc_A Thiol:disulfide interch 30.0 5.2 0.00018 29.8 -1.8 28 43-73 29-56 (184)
326 2jvm_A Uncharacterized protein 30.0 19 0.00066 26.2 1.3 14 43-56 52-65 (80)
327 2kn9_A Rubredoxin; metalloprot 29.9 17 0.00059 26.4 1.0 14 39-52 55-68 (81)
328 2jrr_A Uncharacterized protein 29.6 16 0.00055 25.7 0.8 12 43-54 39-50 (67)
329 3vhs_A ATPase wrnip1; zinc fin 29.4 24 0.00082 21.0 1.4 19 73-91 6-25 (29)
330 2yre_A F-box only protein 30; 28.7 44 0.0015 25.2 3.1 45 44-91 37-87 (100)
331 2jr6_A UPF0434 protein NMA0874 28.4 20 0.00069 25.0 1.1 33 39-82 3-35 (68)
332 2bai_A Genome polyprotein; zin 27.8 7.5 0.00026 23.9 -1.0 9 74-82 17-25 (32)
333 4rxn_A Rubredoxin; electron tr 27.4 18 0.00061 24.3 0.7 14 40-53 32-45 (54)
334 3dpl_R Ring-box protein 1; ubi 27.3 3.9 0.00013 30.3 -2.9 10 73-82 89-98 (106)
335 2ecl_A Ring-box protein 2; RNF 27.2 2 6.8E-05 29.8 -4.3 11 74-84 65-75 (81)
336 1x6f_A Zinc finger protein 462 27.0 33 0.0011 23.8 2.1 45 44-92 25-70 (88)
337 2hf1_A Tetraacyldisaccharide-1 26.9 20 0.00069 25.0 0.9 33 39-82 3-35 (68)
338 1wir_A Protein arginine N-meth 26.8 33 0.0011 26.4 2.3 31 69-99 11-43 (121)
339 2js4_A UPF0434 protein BB2007; 26.5 21 0.00073 25.0 1.0 33 39-82 3-35 (70)
340 2jne_A Hypothetical protein YF 25.3 7.2 0.00025 29.8 -1.8 53 45-101 33-92 (101)
341 3mkr_B Coatomer subunit alpha; 24.2 27 0.00092 31.1 1.4 33 43-88 277-310 (320)
342 2jsp_A Transcriptional regulat 23.8 35 0.0012 25.2 1.8 31 68-99 16-46 (87)
343 2pk7_A Uncharacterized protein 23.5 23 0.00078 24.8 0.7 33 39-82 3-35 (69)
344 2ecg_A Baculoviral IAP repeat- 23.5 12 0.0004 25.2 -0.8 40 40-85 21-68 (75)
345 1ncs_A Peptide M30F, transcrip 23.2 39 0.0013 19.8 1.6 6 86-91 35-40 (47)
346 3mhs_C SAGA-associated factor 23.1 39 0.0013 25.6 1.9 26 40-65 66-91 (99)
347 1s24_A Rubredoxin 2; electron 22.9 23 0.0008 26.0 0.7 14 39-52 63-76 (87)
348 3t6p_A Baculoviral IAP repeat- 21.9 9.6 0.00033 33.9 -1.9 43 42-85 293-338 (345)
349 2j9u_B VPS36, vacuolar protein 21.6 23 0.0008 25.7 0.4 9 74-82 18-26 (76)
350 2yu4_A E3 SUMO-protein ligase 21.2 65 0.0022 22.5 2.7 32 50-82 26-59 (94)
351 3gn3_A Putative protein-disulf 21.2 9.9 0.00034 30.0 -1.8 21 41-61 20-41 (182)
352 2l8e_A Polyhomeotic-like prote 20.6 35 0.0012 22.5 1.1 14 43-56 17-30 (49)
No 1
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.76 E-value=2.8e-05 Score=50.68 Aligned_cols=54 Identities=24% Similarity=0.550 Sum_probs=45.9
Q ss_pred ceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
..|.|+.|++. -....|..|+...|....+.-.|++|..... .++..|+...|+
T Consensus 9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 36999999997 5688899999998876678899999999754 589999988886
No 2
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.75 E-value=2.9e-05 Score=52.35 Aligned_cols=54 Identities=22% Similarity=0.413 Sum_probs=46.3
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~ 97 (200)
.|.|+.|++. .....|..|+...|..+.+...|++|..... .+|..|+...|+.
T Consensus 15 ~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 15 PYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred CeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 5999999997 6778999999988987778899999999754 5899999887764
No 3
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=97.31 E-value=0.00018 Score=45.26 Aligned_cols=51 Identities=20% Similarity=0.319 Sum_probs=40.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. -....|..|+...+ ..++..|++|..... .+|..|+...|+
T Consensus 4 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~hh~ 57 (57)
T 3uk3_C 4 SRECSYCGKFFRSNYYLNIHLRTHT--GEKPYKCEFCEYAAAQKTSLRYHLERHHK 57 (57)
T ss_dssp -CBCTTTCCBCSCHHHHHHHHHHHH--CCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred CccCCCCcchhCChHHHHHHHHHcC--CCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence 5899999997 67788999998743 245689999998744 589999988775
No 4
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=97.21 E-value=0.00044 Score=47.51 Aligned_cols=48 Identities=21% Similarity=0.465 Sum_probs=21.1
Q ss_pred ecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhh
Q 028989 45 FLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHIT 92 (200)
Q Consensus 45 F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt 92 (200)
|.|+.|++. -....|..|+...|....+...|++|..... .+|..|+.
T Consensus 36 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~ 86 (95)
T 2yt9_A 36 YSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIK 86 (95)
T ss_dssp EECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHH
T ss_pred CcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHH
Confidence 455555543 3344444555443333234444555544422 24444443
No 5
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.16 E-value=0.00041 Score=45.77 Aligned_cols=53 Identities=19% Similarity=0.289 Sum_probs=42.1
Q ss_pred ceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccc
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~ 97 (200)
..|.|+.|++. -....|..|+.. |.. .+...|++|..... .+|..|+...|+.
T Consensus 8 ~~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 63 (70)
T 1x5w_A 8 HPEKCSECSYSCSSKAALRIHERI-HCT-DRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63 (70)
T ss_dssp CSEECSSSSCEESSHHHHHHHHGG-GCC-SCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-cCC-CCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence 36999999997 567889999987 543 45689999999854 5899999877763
No 6
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.12 E-value=0.00053 Score=46.14 Aligned_cols=54 Identities=20% Similarity=0.337 Sum_probs=43.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCC--CCcccccccccccc--hhhhhhhhhhccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIE--AKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e--~k~vVCPICa~~v~--~d~v~Hlt~qH~~ 97 (200)
.|.|+.|++. -....|..|+...|... .+...|++|..... .+|..|+...|+.
T Consensus 15 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 15 PYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCC
Confidence 5999999997 57788999999888654 36689999998754 5899998766654
No 7
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=97.01 E-value=0.0008 Score=42.22 Aligned_cols=50 Identities=16% Similarity=0.284 Sum_probs=39.3
Q ss_pred ecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 45 FLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 45 F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
|.|+.|++. -....|..|+... .. .+.-.|++|..... .+|..|+...|+
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h-~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 2 YICEECGIRXKKPSMLKKHIRTH-TD-VRPYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CBCTTTCCBCSSHHHHHHHHHHT-SS-CCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CcCCCCcCcCCCHHHHHHHHHhc-CC-CCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence 789999997 5678899999874 32 46689999999754 589999876554
No 8
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.01 E-value=0.00065 Score=45.13 Aligned_cols=51 Identities=18% Similarity=0.292 Sum_probs=40.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|++|++. -....|..|+...+ ..+...|++|..... .+|..|+++.++
T Consensus 14 ~~~C~~C~k~f~~~~~L~~H~~~h~--~~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 67 (72)
T 1x6e_A 14 PYGCVECGKAFSRSSILVQHQRVHT--GEKPYKCLECGKAFSQNSGLINHQRIHTS 67 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHGGG--CSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred CccCCCCCCccCCHHHHHHHHHhcC--CCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 5999999997 57788999998643 346689999999754 589999876554
No 9
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.84 E-value=0.001 Score=43.67 Aligned_cols=48 Identities=19% Similarity=0.422 Sum_probs=39.4
Q ss_pred ceecCCCCcccccHHHHHhhhhhcCCCCCCccccc-cccccc--chhhhhhhhh
Q 028989 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCP-VCAKRV--GTDIVSHITM 93 (200)
Q Consensus 43 ~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCP-ICa~~v--~~d~v~Hlt~ 93 (200)
-.|.|++|++.|....|..|+.. ...++..|+ +|.... ..+|..|+++
T Consensus 9 ~~~~C~~C~k~f~~~~L~~H~~~---~~~~p~~C~~~C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 9 RTQPCTYCTKEFVFDTIQSHQYQ---CPRLPVACPNQCGVGTVAREDLPGHLKD 59 (66)
T ss_dssp CEEECSSSCCEEEHHHHHHHHHH---CSSSEEECTTCCSCCEEETTTHHHHHHT
T ss_pred CCeeccccCCccCHHHHHHHHHH---cCCcCccCCcccCcccccHHHHHHHHHh
Confidence 36999999998778899999986 456788999 999863 3589999853
No 10
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.74 E-value=0.0017 Score=43.51 Aligned_cols=52 Identities=19% Similarity=0.343 Sum_probs=40.4
Q ss_pred ceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
..|.|+.|++. -....|..|+... .. .+...|++|..... .+|..|+.+.++
T Consensus 17 ~~~~C~~C~~~f~~~~~l~~H~~~h-~~-~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 71 (77)
T 2cot_A 17 RRYKCDECGKSFSHSSDLSKHRRTH-TG-EKPYKCDECGKAFIQRSHLIGHHRVHTG 71 (77)
T ss_dssp CSSBCSSSCCBCSCHHHHHHHHTTT-CC-SCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred CCEECCCCCcccCCHHHHHHHHHHc-CC-CcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence 36999999997 4678899999764 33 46689999999754 589999876554
No 11
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.73 E-value=0.0015 Score=44.90 Aligned_cols=47 Identities=17% Similarity=0.318 Sum_probs=23.0
Q ss_pred ecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhh
Q 028989 45 FLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (200)
Q Consensus 45 F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~ 93 (200)
|.|+.|++. -....|..|+...+. .+...|++|..... .+|..|+..
T Consensus 9 ~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~ 58 (96)
T 2dmd_A 9 HKCEVCGKCFSRKDKLKTHMRCHTG--VKPYKCKTCDYAAADSSSLNKHLRI 58 (96)
T ss_dssp CCBTTTTBCCCCHHHHHHHGGGCCC--CCSEECSSSCCEESSHHHHHHHHHH
T ss_pred eECCCCCCccCCHHHHHHHHHhcCC--CCCEeCCCCCCccCCHHHHHHHHHH
Confidence 555555554 344555555554322 23345555555432 355555544
No 12
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.72 E-value=0.0023 Score=42.51 Aligned_cols=53 Identities=17% Similarity=0.380 Sum_probs=41.1
Q ss_pred cceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 42 NAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 42 r~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
...|.|+.|++. -....|..|+...+. .+.-.|++|..... .+|..|+.+.++
T Consensus 15 ~~~~~C~~C~k~f~~~~~l~~H~~~H~~--~~~~~C~~C~k~f~~~~~L~~H~~~H~~ 70 (74)
T 2lce_A 15 DKPYKCDRCQASFRYKGNLASHKTVHTG--EKPYRCNICGAQFNRPANLKTHTRIHSG 70 (74)
T ss_dssp CCSBCCTTSSCCBSCHHHHHHHHHHHCC--CCSEECTTTCCEESCHHHHHHHHHHHCC
T ss_pred CCCeECCCCCceeCCHHHHHHHHHHcCC--CCCEECCCCCchhCCHHHHHHHHHhcCC
Confidence 346999999997 567889999987533 45689999999754 589999876554
No 13
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.70 E-value=0.0013 Score=43.66 Aligned_cols=50 Identities=18% Similarity=0.434 Sum_probs=28.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH 95 (200)
.|.|+.|++. -....|..|+...+. .+...|++|..... .++..|++..+
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~ 81 (82)
T 2kmk_A 29 PYPCQYCGKRFHQKSDMKKHTFIHTG--EKPHKCQVCGKAFSQSSNLITHSRKHT 81 (82)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHT--CCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred CeeCCcCChhhCCHHHHHHHHHHhcC--CCCCcCCCcchhhCChHHHHHHHHhhC
Confidence 3666666665 355666666654432 24456666666533 36666665443
No 14
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.69 E-value=0.0019 Score=40.93 Aligned_cols=51 Identities=22% Similarity=0.399 Sum_probs=39.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. -....|..|+.. |.. .+.-.|++|..... .+|..|+...|.
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~H~ 55 (60)
T 2adr_A 2 SFVCEVCTRAFARQEHLKRHYRS-HTN-EKPYPCGLCNRAFTRRDLLIRHAQKIHS 55 (60)
T ss_dssp CBCCTTTCCCBSCHHHHHHHHHT-TTS-SCSEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred cCcCCCCccccCCHHHHHHHHHH-hCC-CCCccCCCCCCccCCHHHHHHHHHHHcC
Confidence 4899999997 567889999987 433 45689999999854 588899754454
No 15
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.68 E-value=0.00033 Score=49.81 Aligned_cols=53 Identities=23% Similarity=0.396 Sum_probs=41.9
Q ss_pred eecCCCCcccc--cHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccc
Q 028989 44 MFLCPFCAEDF--DIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (200)
Q Consensus 44 ~F~CPfC~e~f--D~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~ 97 (200)
.|.|+.|++.| ....|..|+...|. ..+...|++|..... .+|..|++..|+.
T Consensus 24 ~~~C~~C~k~f~~~~~~L~~H~~~h~~-~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 24 EAVCPTCNVVTRKTLVGLKKHMEVCQK-LQDALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp CCCCTTTCCCCSSCSHHHHHHHHHHHH-HHHHHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CcCCCCCCCChhhhHHHHHHHHHHHcC-CCCCEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 59999999986 68899999977543 245679999999854 5899999777753
No 16
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=96.63 E-value=0.002 Score=46.97 Aligned_cols=50 Identities=32% Similarity=0.638 Sum_probs=40.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~ 97 (200)
.|.|+.|++. -....|..|+.. | .++-.|++|..... .+|..|++..||.
T Consensus 74 ~~~C~~C~k~f~~~~~l~~H~~~-H---~~~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 74 QFVCPLCLMPFSSSVSLKQHIRY-T---EHTKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-T---CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-C---CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 5999999997 567789999876 5 55679999998754 5899999888875
No 17
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.62 E-value=0.002 Score=46.44 Aligned_cols=50 Identities=24% Similarity=0.466 Sum_probs=39.9
Q ss_pred eecCCCCcccc--cHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAEDF--DIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~f--D~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++.| ....|..|+.. | ..+.-.|++|..... .+|..|+..-|.
T Consensus 34 ~~~C~~C~k~F~~~~~~L~~H~~~-h--~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~ 87 (96)
T 2ctd_A 34 SVSCPTCQAVGRKTIEGLKKHMEN-C--KQEMFTCHHCGKQLRSLAGMKYHVMANHN 87 (96)
T ss_dssp CEECTTTCSCEESSHHHHHHHHHH-H--CCCCCCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred CcCCCCCCCCcccCHHHHHHHHHH-H--CCCCeECCCCCCeeCCHHHHHHHhHHhcC
Confidence 59999999988 78999999876 4 457789999999854 588999433443
No 18
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.59 E-value=0.0019 Score=43.73 Aligned_cols=50 Identities=20% Similarity=0.432 Sum_probs=28.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH 95 (200)
.|.|++|++. -....|..|+...+. .+...|++|..... .+|..|+.+.+
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~ 86 (90)
T 1a1h_A 34 PFQCRICMRNFSRSDHLTTHIRTHTG--EKPFACDICGRKFARSDERKRHTKIHL 86 (90)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHC--CCCEECTTTCCEESSHHHHHHHHGGGG
T ss_pred CccCCCCCcccCCHHHHHHHHHHcCC--CCCccCCCCCchhCCHHHHHHHHHHhc
Confidence 3667777665 455666666664332 24456777766533 36666665443
No 19
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.53 E-value=0.0031 Score=44.12 Aligned_cols=53 Identities=19% Similarity=0.431 Sum_probs=38.3
Q ss_pred cceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 42 NAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 42 r~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
...|.|++|++. -....|..|+...+. .+...|++|..... .+|..|+...++
T Consensus 15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 70 (106)
T 2ee8_A 15 KKEFICKFCGRHFTKSYNLLIHERTHTD--ERPYTCDICHKAFRRQDHLRDHRYIHSK 70 (106)
T ss_dssp CCCCBCSSSCCBCSSHHHHHHHHHHHCC--SCCCBCSSSCCBCSCHHHHHHHGGGSCC
T ss_pred CcCeECCCCCCccCCHHHHHHHHHHcCC--CCCcCCCCccchhCCHHHHHHHHHHhCC
Confidence 346889999887 467788888876543 35678999988744 588888866544
No 20
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=96.52 E-value=0.0029 Score=47.24 Aligned_cols=57 Identities=19% Similarity=0.290 Sum_probs=44.1
Q ss_pred CccceecCCCCccc-ccHHHHHhhhhhcCCCCCCc-------ccccccccccc--hhhhhhhhhhcc
Q 028989 40 DLNAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKN-------GVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 40 d~r~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~-------vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
+....|+|+.|++. -+...|..|+...|..+... ..|++|..... .+|..|+...++
T Consensus 21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 87 (155)
T 2rpc_A 21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (155)
T ss_dssp TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHC
T ss_pred hhhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCC
Confidence 34557999999997 56888999999989876532 47999998754 588899876554
No 21
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.51 E-value=0.0026 Score=45.24 Aligned_cols=53 Identities=23% Similarity=0.417 Sum_probs=38.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCC-CCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHP-IEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~-~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. .....|..|+...|. ...+...|++|..... .+|..|+...++
T Consensus 35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 91 (124)
T 2dlq_A 35 PFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTG 91 (124)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred CeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCC
Confidence 5889999886 577888888887543 2345578898888744 478888876554
No 22
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.50 E-value=0.0031 Score=44.79 Aligned_cols=48 Identities=23% Similarity=0.353 Sum_probs=27.3
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~ 93 (200)
.|.||.|++. -....|..|+...+. .+...|++|..... .+|..|+..
T Consensus 7 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~ 57 (124)
T 2dlq_A 7 GVECPTCHKKFLSKYYLKVHNRKHTG--EKPFECPKCGKCYFRKENLLEHEAR 57 (124)
T ss_dssp SCCCTTTCCCCSSHHHHHHHHHHHSS--CCSCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CCCCCCCCCcCCCHHHHHHHHHhCCC--CCCeECCCCCchhcCHHHHHHHHhh
Confidence 4666666665 355566666655432 24456666666532 366666654
No 23
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.49 E-value=0.0014 Score=43.92 Aligned_cols=55 Identities=20% Similarity=0.344 Sum_probs=42.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCC-CCCcccccccccccc--hhhhhhhhhhccch
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPI-EAKNGVCPVCAKRVG--TDIVSHITMQHGNF 98 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~-e~k~vVCPICa~~v~--~d~v~Hlt~qH~~~ 98 (200)
.|.|+.|++. -....|..|+...+.. ..+.-.|++|..... .+|..|+...|...
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 7 GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred CeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence 5999999997 5678899998775532 246789999999854 58999987666653
No 24
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.44 E-value=0.0044 Score=42.51 Aligned_cols=55 Identities=20% Similarity=0.291 Sum_probs=42.1
Q ss_pred cceecCCCCccc-ccHHHHHhhhhhcCCCCCCc-------ccccccccccc--hhhhhhhhhhcc
Q 028989 42 NAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKN-------GVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 42 r~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~-------vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
...|+|+.|++. -....|..|+...|..+... ..|++|..... .+|..|+++.++
T Consensus 23 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~ 87 (95)
T 2ej4_A 23 QLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87 (95)
T ss_dssp CSSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHT
T ss_pred cCCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCC
Confidence 346889999997 56788999998878765321 68999999854 589999876443
No 25
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.43 E-value=0.0031 Score=45.31 Aligned_cols=52 Identities=25% Similarity=0.374 Sum_probs=41.9
Q ss_pred ceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
..|.||.|++. -....|..|+...| ..++-.|++|..... .+|..|+...|.
T Consensus 27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~~L~~H~~~~H~ 81 (85)
T 2lv2_A 27 ECHLCPVCGESFASKGAQERHLRLLH--AAQVFPCKYCPATFYSSPGLTRHINKCHP 81 (85)
T ss_dssp TTEECTTSCCEESSHHHHHHHHHTTS--CSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred CCEECCCCCCCcCcHHHHhhhhhhcc--CCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence 46999999997 56788999998754 356789999999854 599999866664
No 26
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.42 E-value=0.0048 Score=42.27 Aligned_cols=51 Identities=18% Similarity=0.399 Sum_probs=40.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. -....|..|+...+ ..+...|++|..... .+|..|+.+.|+
T Consensus 36 ~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 89 (96)
T 2dmd_A 36 PYKCKTCDYAAADSSSLNKHLRIHS--DERPFKCQICPYASRNSSQLTVHLRSHTG 89 (96)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHSC--CCCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHhC--CCCCccCCCCCCccCCHHHHHHHHHHhcC
Confidence 5999999997 57788999998743 245689999999744 589999876655
No 27
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.41 E-value=0.0024 Score=42.28 Aligned_cols=50 Identities=24% Similarity=0.503 Sum_probs=39.8
Q ss_pred ecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 45 FLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 45 F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
|.|+.|++. -....|..|+...+ ..+...|++|..... .++..|+...++
T Consensus 2 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (82)
T 2kmk_A 2 FDCKICGKSFKRSSTLSTHLLIHS--DTRPYPCQYCGKRFHQKSDMKKHTFIHTG 54 (82)
T ss_dssp EECSSSCCEESSHHHHHHHHHHHH--TCCCEECSSSCCEESSHHHHHHHHHHHHT
T ss_pred ccCCCCcccccCchhHHHHHHHcC--CCCCeeCCcCChhhCCHHHHHHHHHHhcC
Confidence 899999997 57888999998754 346689999998754 589999876554
No 28
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.40 E-value=0.0039 Score=44.04 Aligned_cols=54 Identities=22% Similarity=0.325 Sum_probs=36.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccchh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGNFF 99 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~~~ 99 (200)
.|.|++|++. -....|..|+...+. .+...|++|..... .+|..|++..|....
T Consensus 37 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~ 93 (110)
T 2csh_A 37 PYGCGVCGKKFKMKHHLVGHMKIHTG--IKPYECNICAKRFMWRDSFHRHVTSCTKSYE 93 (110)
T ss_dssp SEECTTTSCEESSSHHHHHHHTTTCC--CCCEECSSSCCEESCHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHcCC--CCCeeCCCCcchhcCHHHHHHHHHHcccccc
Confidence 4788888886 456778888765432 34567888887643 578888876665543
No 29
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=96.39 E-value=0.0027 Score=42.82 Aligned_cols=49 Identities=29% Similarity=0.649 Sum_probs=39.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQ 94 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~q 94 (200)
-|.|+.|++. -....|..|+.. |. ..++-.|++|..... .+|..|+++.
T Consensus 4 py~C~~C~k~F~~~~~L~~H~~~-Ht-~ekp~~C~~C~k~F~~~~~L~~H~~~H 55 (60)
T 4gzn_C 4 PFFCNFCGKTYRDASGLSRHRRA-HL-GYRPRSCPECGKCFRDQSEVNRHLKVH 55 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHHHH-HH-TCCCEECTTTCCEESSHHHHHHHGGGG
T ss_pred CccCCCCCCEeCCHHHHHHHHHH-hC-CCcCeECCCCCCCcCCHHHHHHHhCcc
Confidence 3899999997 567889999876 54 457789999999854 5999998753
No 30
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.31 E-value=0.0035 Score=42.87 Aligned_cols=53 Identities=25% Similarity=0.429 Sum_probs=41.8
Q ss_pred ceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccc
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~ 97 (200)
..|.|+.|++. -....|..|+...+. .+...|++|..... .+|..|+...|+.
T Consensus 6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 6 SGVACEICGKIFRDVYHLNRHKLSHSG--EKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp SCEECSSSCCEESSSHHHHHHHHHSCS--SCSEECSSSCCEESCHHHHHHHHHHHCCC
T ss_pred CCeECCCCCCccCChHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhcCC
Confidence 36999999997 467889999986432 45689999998754 5899999877764
No 31
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.23 E-value=0.0055 Score=42.83 Aligned_cols=51 Identities=20% Similarity=0.252 Sum_probs=40.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. .....|..|+...+. .+...|++|..... .+|..|+++.++
T Consensus 45 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 98 (106)
T 2ee8_A 45 PYTCDICHKAFRRQDHLRDHRYIHSK--EKPFKCQECGKGFCQSRTLAVHKTLHMQ 98 (106)
T ss_dssp CCBCSSSCCBCSCHHHHHHHGGGSCC--CCTTSCSSSCCCCSSHHHHHHHHHHTTS
T ss_pred CcCCCCccchhCCHHHHHHHHHHhCC--CCCeECCCcCCcccCHHHHHHHHHHhCC
Confidence 5999999997 578899999876542 45679999998754 589999876554
No 32
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=96.16 E-value=0.0036 Score=42.84 Aligned_cols=54 Identities=22% Similarity=0.368 Sum_probs=39.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccchh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGNFF 99 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~~~ 99 (200)
.|.|+.|++. -....|..|+... .. .+.-.|++|..... .+|..|+...|+..+
T Consensus 3 ~~~C~~C~k~f~~~~~L~~H~~~H-~~-~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~ 59 (88)
T 1llm_C 3 PFQCRICMRNFSRSDHLTTHIRTH-TG-EKPFACDICGRKFARSDERKRHRDIQHILPI 59 (88)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHH-HC-CCCEECTTTCCEESSHHHHHHHHHHHTHHHH
T ss_pred CCcCCCCCCccCCHHHHHHHHHHc-CC-CCCccCCCCCCccCCHHHHHHHHHHhCCCcc
Confidence 4889999886 4677888888764 32 35578999988743 588888888886443
No 33
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.78 E-value=0.0026 Score=43.96 Aligned_cols=48 Identities=25% Similarity=0.474 Sum_probs=39.4
Q ss_pred ceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccccc-hhhhhhhhh
Q 028989 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG-TDIVSHITM 93 (200)
Q Consensus 43 ~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~-~d~v~Hlt~ 93 (200)
-.+.|+||++.|-...|-.|. .|+- .+.+.||.|...+. .+|..|+.+
T Consensus 16 r~~~C~~C~~~~~~~~L~~H~--~~c~-~~~~~C~~C~~~~~~~~l~~H~~~ 64 (75)
T 2d9k_A 16 RLAVCQHCDLELSILKLKEHE--DYCG-ARTELCGNCGRNVLVKDLKTHPEV 64 (75)
T ss_dssp CCEECSSSCCEECHHHHHHHH--HHHH-HCEEECSSSCCEEETTGGGTHHHH
T ss_pred cccCCcccChHhhHHHHHHHH--hHcC-CCceEcccCCCcCcHHHHHHHHHH
Confidence 368999999999999999998 4543 56789999998744 688889864
No 34
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.75 E-value=0.0012 Score=45.28 Aligned_cols=51 Identities=12% Similarity=0.070 Sum_probs=42.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~ 97 (200)
.|.|+.|++. -....|..|+...|. ...+|++|..... .+|..||...|+.
T Consensus 31 ~~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~c~~C~~~f~~~~~L~~H~~~~h~~ 84 (88)
T 1llm_C 31 PFACDICGRKFARSDERKRHRDIQHI---LPILEDKVEELLSKNYHLENEVARLKKL 84 (88)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHTH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHHHhCC---CcchHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 5999999997 577899999999983 6789999998744 5899999877765
No 35
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=95.67 E-value=0.014 Score=40.06 Aligned_cols=55 Identities=18% Similarity=0.402 Sum_probs=38.4
Q ss_pred CccceecCCC--Cccc-ccHHHHHhhhhhcCCCCCCccccc--ccccccc--hhhhhhhhhhcc
Q 028989 40 DLNAMFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCP--VCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 40 d~r~~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCP--ICa~~v~--~d~v~Hlt~qH~ 96 (200)
+....|.|++ |++. -....|..|+...+. .+...|+ +|..... .+|..|+...++
T Consensus 11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 72 (100)
T 2ebt_A 11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTG--EKPYKCTWEGCDWRFARSDELTRHYRKHTG 72 (100)
T ss_dssp CSCCCEECCSSSCCCEESCHHHHHHHHHHHSC--CCCEECCSSSCCCEESSHHHHHHHHHHHTS
T ss_pred ccCcceEcCCCCCCCcccCHHHHHHHHHHhCC--CCCeeCCCCCCCCccCCHHHHHHHHHHhCC
Confidence 4445788887 9886 567888888886533 3557886 5887643 578888876554
No 36
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.61 E-value=0.012 Score=38.90 Aligned_cols=52 Identities=23% Similarity=0.406 Sum_probs=40.4
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccc--cccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI--Ca~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|++ |++. -....|..|+...|.. .+.-.|++ |..... .+|..|+.+.++
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~-~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 65 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH-QKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGS-CCCEECSCTTTCCEESSHHHHHHHHHHHHT
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCC-CCCeECCCCCCcCccCCHHHHHHHHHHhCC
Confidence 478887 9997 5788899999877765 46689999 998744 589999876544
No 37
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.50 E-value=0.0089 Score=42.19 Aligned_cols=45 Identities=20% Similarity=0.412 Sum_probs=34.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHIT 92 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt 92 (200)
.|.|+.|++. -....|..|+.. | .+...|++|..... .+|..|++
T Consensus 16 ~~~C~~C~~~f~~~~~l~~H~~~-H---~~~~~C~~C~~~f~~~~~l~~H~~ 63 (107)
T 1wjp_A 16 VYQCRLCNAKLSSLLEQGSHERL-C---RNAAVCPYCSLRFFSPELKQEHES 63 (107)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH-H---HHSBCCTTTCCCBSSHHHHHHHHH
T ss_pred CeECCCCCCccCCHHHHHHHHHH-C---CCCccCCCCCCccCCHHHHHHHHH
Confidence 5889999886 467788888877 3 35678999988744 57888874
No 38
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=95.45 E-value=0.016 Score=41.39 Aligned_cols=49 Identities=22% Similarity=0.450 Sum_probs=28.8
Q ss_pred eecCC--CCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhc
Q 028989 44 MFLCP--FCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (200)
Q Consensus 44 ~F~CP--fC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH 95 (200)
.|.|| .|++. -+...|..|+.. | ..+.-.|++|..... .++..|+...+
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~-h--~~~~~~C~~C~~~f~~~~~l~~H~~~h~ 58 (124)
T 1ubd_C 5 TIACPHKGCTKMFRDNSAMRKHLHT-H--GPRVHVCAECGKAFVESSKLKRHQLVHT 58 (124)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHGG-G--SCCCEECTTTCCEESSHHHHHHHGGGTS
T ss_pred cccCCCCCCcCccCCHHHHHHHHHH-c--CCCCeECCCCCchhCCHHHHHHHHHHcC
Confidence 46676 67765 355666777653 3 345566777766533 46666665433
No 39
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.41 E-value=0.0084 Score=44.42 Aligned_cols=51 Identities=24% Similarity=0.468 Sum_probs=36.4
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccc--cccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI--Ca~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|++ |++. -....|..|+...+ ..+...|++ |..... .+|..|+...|.
T Consensus 67 ~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~ 124 (155)
T 2gli_A 67 PHKCTFEGCRKSYSRLENLKTHLRSHT--GEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124 (155)
T ss_dssp CCCCCSTTCCCCCSSHHHHHHHHHHTT--TCCCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred CccCCCCCCCCcccCHHHHHHHHHHcC--CCCCeeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 488987 9886 56778888887643 235678988 888743 588888844453
No 40
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=95.38 E-value=0.016 Score=36.51 Aligned_cols=40 Identities=20% Similarity=0.345 Sum_probs=32.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~ 84 (200)
.|.|+.|++. -....|..|+...|.. .+.-.|++|.....
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~-~k~~~C~~C~k~F~ 52 (54)
T 2eps_A 12 PYICQSCGKGFSRPDHLNGHIKQVHTS-ERPHKCQVWVSGPS 52 (54)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHTSCC-CCCCCSSSSCCSSC
T ss_pred CeECCCCCcccCCHHHHHHHHHHhcCC-CCCccCCCCCCCCC
Confidence 5999999997 5778899999867765 46689999987643
No 41
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=95.32 E-value=0.011 Score=44.99 Aligned_cols=49 Identities=20% Similarity=0.373 Sum_probs=30.8
Q ss_pred ceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhh
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~ 93 (200)
-.|.|+.|++. -....|..|+.. |.. .++-.|++|..... .+|..|+.+
T Consensus 21 k~y~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~ 72 (133)
T 2lt7_A 21 VYYICIVCKRSYVCLTSLRRHFNI-HSW-EKKYPCRYCEKVFPLAEYRTKHEIH 72 (133)
T ss_dssp EEEEETTTCCEESCHHHHHHHHHH-HHC-CSCEECSSSSCEESSHHHHHHHHHH
T ss_pred cCeECCCCCCCcCCHHHHHHHHHH-cCC-CCCeeCCccCeecccccchhhhccc
Confidence 35777777775 456677777764 432 35567777776633 467777654
No 42
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=95.26 E-value=0.014 Score=39.29 Aligned_cols=51 Identities=24% Similarity=0.504 Sum_probs=39.6
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.||+ |++. -....|..|+...+. .+...|++|..... .+|..|+...++
T Consensus 4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 4 PYACPVESCDRRFSQSGSLTRHIRIHTG--QKPFQCRICMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred ceECCCCCCCCccCCHHHHHHHHHHhCC--CCCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 589995 9997 567889999986543 45679999998754 589999876554
No 43
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=95.24 E-value=0.014 Score=38.31 Aligned_cols=49 Identities=22% Similarity=0.461 Sum_probs=37.4
Q ss_pred ceecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhh
Q 028989 43 AMFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (200)
Q Consensus 43 ~~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~ 93 (200)
..|.||+ |++. -....|..|+...+ ..+.-.|++|..... .++..|+.+
T Consensus 18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 18 RPYACPVESCDRRFSRSDELTRHIRIHT--GQKPFQCRICMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp CCEECSSTTBCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHTT
T ss_pred CccCCcCCCCCCccCCHHHHHHHHHhhC--CCCCeECCCCCchhCCHHHHHHHHHh
Confidence 3599996 9997 56788999987643 245689999999754 588888753
No 44
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=95.23 E-value=0.012 Score=45.45 Aligned_cols=51 Identities=24% Similarity=0.518 Sum_probs=37.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. -....|..|+...+. .+...|++|..... .+|..|+...++
T Consensus 105 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 105 PYACPECGKSFSQLAHLRAHQRTHTG--EKPYKCPECGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred CCcCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence 4889999886 566778888876543 35678999988744 488888876554
No 45
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.23 E-value=0.02 Score=34.35 Aligned_cols=34 Identities=18% Similarity=0.097 Sum_probs=27.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytn_A 12 PYKCNECGKVFTQNSHLARHRGI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHGGG-TSC-CCCCSCCCC
T ss_pred CeECCCCCCeeCCHHHHHHHhhh-cCC-CCCCCCCCC
Confidence 5999999997 567788999765 544 467899998
No 46
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.20 E-value=0.018 Score=34.52 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=28.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+...|.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~~H~~-~k~~~C~~C 47 (47)
T 2epx_A 12 PYECIECGKAFIQNTSLIRHWRYYHTG-EKPSGPSSG 47 (47)
T ss_dssp SBCCSSSCCCBSSHHHHHHHHTTTTTT-SCSSSCCCC
T ss_pred CEECCccCchhCChHHHHHHhHhhcCC-CCCCCCCCC
Confidence 5999999997 6678899998856654 466899998
No 47
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=95.14 E-value=0.019 Score=34.51 Aligned_cols=34 Identities=21% Similarity=0.074 Sum_probs=27.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |..+ ++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~~-k~~~C~~c 46 (46)
T 2eq0_A 12 PYKCHECGKVFRRNSHLARHQLI-HTGE-KPSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHTT-TCCC-CCSCCSCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCCC-CCCCCCCC
Confidence 5999999997 567889999765 5443 67899998
No 48
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.10 E-value=0.019 Score=42.42 Aligned_cols=50 Identities=22% Similarity=0.508 Sum_probs=39.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCC--CCCCcccccccccccc--hhhhhh-hhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHP--IEAKNGVCPVCAKRVG--TDIVSH-ITM 93 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~--~e~k~vVCPICa~~v~--~d~v~H-lt~ 93 (200)
.|.|+.|++. -....|..|+...|. ...++-.|++|..... .+|..| +++
T Consensus 18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~ 73 (102)
T 2ghf_A 18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKY 73 (102)
T ss_dssp SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHT
T ss_pred CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHh
Confidence 5999999997 567889999987785 3456789999999754 588899 543
No 49
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=95.02 E-value=0.019 Score=34.51 Aligned_cols=34 Identities=18% Similarity=0.093 Sum_probs=27.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ema_A 12 RYKCNECGKVFSRNSQLSQHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTG-GGC-CCCCSSSCC
T ss_pred CcCCCCCcchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999997 567889999876 443 367899998
No 50
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=94.99 E-value=0.022 Score=34.19 Aligned_cols=34 Identities=18% Similarity=0.085 Sum_probs=27.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em0_A 12 TWKCRECDMCFSQASSLRLHQNV-HVG-EKPSGPSSG 46 (46)
T ss_dssp CCCCSSSCCCCSSHHHHHHHGGG-GSS-SSCSCSSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCcCCCCC
Confidence 5999999997 667889999876 543 467899998
No 51
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=94.94 E-value=0.023 Score=34.00 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=27.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~k~~~C~~C 46 (46)
T 2el4_A 12 PYGCSQCAKTFSLKSQLIVHQRS-HT-GVKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHGGG-SS-SCCCSCCTTC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 4999999997 667889999865 54 3467899998
No 52
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.91 E-value=0.024 Score=34.02 Aligned_cols=34 Identities=18% Similarity=0.054 Sum_probs=27.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ene_A 12 PYKCNECGKVFRHNSYLSRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TCC-CCCCSCCCC
T ss_pred CeECCCCCchhCChHHHHHHHhh-cCC-CCCCCCCCC
Confidence 5999999997 567889999876 543 467889998
No 53
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.86 E-value=0.025 Score=33.80 Aligned_cols=34 Identities=15% Similarity=0.001 Sum_probs=27.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eop_A 12 PHECRECGKSFSFNSQLIVHQRI-HTG-ENPSGPSSG 46 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TTT-SCCSCCCCC
T ss_pred CeeCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 567889999876 543 467899998
No 54
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.83 E-value=0.016 Score=40.84 Aligned_cols=50 Identities=22% Similarity=0.306 Sum_probs=39.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. -....|..|+. |.. .+...|++|..... .+|..|+...|.
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~-~~~~~C~~C~~~f~~~~~L~~H~~~~H~ 94 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCE-YKKLTCLECMRTFKSSFSIWRHQVEVHN 94 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCS-TGGGEEGGGTEECSSHHHHHHHHHHTSC
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCC-CCCccCccccchhCCHHHHHHHHHHHcC
Confidence 5999999997 56788999984 654 46689999998754 589999864453
No 55
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=94.82 E-value=0.019 Score=37.95 Aligned_cols=50 Identities=22% Similarity=0.415 Sum_probs=26.2
Q ss_pred ecC--CCCccc-ccHHHHHhhhhhcCCCCCCcccccc--cccccc--hhhhhhhhhhcc
Q 028989 45 FLC--PFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 45 F~C--PfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI--Ca~~v~--~d~v~Hlt~qH~ 96 (200)
|.| +.|++. -....|..|+...+. .+...|++ |..... .++..|+...++
T Consensus 2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 58 (85)
T 2j7j_A 2 YVCHFENCGKAFKKHNQLKVHQFSHTQ--QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58 (85)
T ss_dssp EECCSTTCCCEESSHHHHHHHHHHHHT--TCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred ccCCCCCCCcccCCHHHHHHHHHHhCC--CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 556 556665 345556666544322 24456655 665432 356666655554
No 56
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.78 E-value=0.028 Score=33.67 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=27.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2eoq_A 12 PFKCDICGKSFCGRSRLNRHSMV-HTA-EKPSGPSSG 46 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-TTC-CCSSSCCCC
T ss_pred CcCCCcCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 567889999775 543 367889998
No 57
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.76 E-value=0.027 Score=33.74 Aligned_cols=34 Identities=18% Similarity=0.167 Sum_probs=27.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|++|++. -....|..|+.. |.. .++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ytj_A 12 PYICAECGKAFTIRSNLIKHQKI-HTK-QKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-TSC-CCCSSCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 567889999875 543 467899998
No 58
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=94.73 E-value=0.03 Score=39.38 Aligned_cols=50 Identities=20% Similarity=0.450 Sum_probs=40.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.| .|++. -....|..|+...+. .+...|++|..... .+|..|+...++
T Consensus 10 ~~~C-~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~ 62 (110)
T 2csh_A 10 LYPC-QCGKSFTHKSQRDRHMSMHLG--LRPYGCGVCGKKFKMKHHLVGHMKIHTG 62 (110)
T ss_dssp CEEC-TTSCEESSHHHHHHHHHHHSC--CCSEECTTTSCEESSSHHHHHHHTTTCC
T ss_pred CEec-cCCCccCCHHHHHHHHHHcCC--CcCccCCCCCcccCCHHHHHHHHHHcCC
Confidence 5999 99997 578889999997654 45689999998744 589999976655
No 59
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.69 E-value=0.032 Score=33.55 Aligned_cols=34 Identities=21% Similarity=0.207 Sum_probs=27.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~-~~k~~~C~~c 46 (46)
T 2emf_A 12 HFECTECGKAFTRKSTLSMHQKI-HT-GEKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESCHHHHHHHGGG-TS-CSSCSCCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 5999999997 567889999875 43 3467899998
No 60
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.67 E-value=0.027 Score=33.74 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=27.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+... . ..++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H-~-~~~~~~C~~c 46 (46)
T 2ytk_A 12 PYKCNECGKVFTQNSHLTNHWRIH-T-GEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH-S-SSSCSSCCCC
T ss_pred CEeCCcCCCccCCHHHHHHHHHHH-C-CCCCCCCCCC
Confidence 5999999997 5678899998764 3 3467899998
No 61
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.65 E-value=0.033 Score=41.11 Aligned_cols=53 Identities=23% Similarity=0.261 Sum_probs=28.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCC-CCCcccccccc-----cc--cchhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPI-EAKNGVCPVCA-----KR--VGTDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~-e~k~vVCPICa-----~~--v~~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. -+...|..|+...|.- +.+..+|++|. .. -..++..|+...++
T Consensus 3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~ 64 (155)
T 2gli_A 3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64 (155)
T ss_dssp BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC
T ss_pred cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC
Confidence 4667777775 4566677777664422 33445666532 22 22356666654443
No 62
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.64 E-value=0.035 Score=33.16 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=26.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eme_A 12 PYVCDYCGKAFGLSAELVRHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCC-CSCCSSCCC
T ss_pred CeECCCCChhhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999997 567889999865 443 456889998
No 63
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=94.61 E-value=0.035 Score=42.74 Aligned_cols=53 Identities=21% Similarity=0.278 Sum_probs=34.1
Q ss_pred eecCC--CCccc-ccHHHHHhhhhhcCCCCCCcccc--cccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCP--FCAED-FDIVGLCCHIDEDHPIEAKNGVC--PVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CP--fC~e~-fD~~~Lc~H~~~eH~~e~k~vVC--PICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+ .|++. .....|..|+...|....+..+| ++|..... .+|..|+.+.++
T Consensus 72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 131 (190)
T 1tf6_A 72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ 131 (190)
T ss_dssp CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred ceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCC
Confidence 46777 67775 56667777776667655566677 66776533 467777665443
No 64
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=94.61 E-value=0.023 Score=43.80 Aligned_cols=52 Identities=23% Similarity=0.487 Sum_probs=41.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~ 97 (200)
.|.|+.|++. -....|..|+...+. .+...|++|..... .+|..|+...++.
T Consensus 77 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~ 131 (190)
T 2i13_A 77 PYKCPECGKSFSQRANLRAHQRTHTG--EKPYACPECGKSFSQLAHLRAHQRTHTGE 131 (190)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHHT--CCCEECTTTCCEESSHHHHHHHHHHHHCC
T ss_pred CccCcccCCccCCHHHHHHHHHhcCC--CCCCcCCCCCCccCCHHHHHHHHHHhCCC
Confidence 5999999997 578899999987654 45679999998754 5899999876653
No 65
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.61 E-value=0.032 Score=33.35 Aligned_cols=34 Identities=15% Similarity=0.094 Sum_probs=26.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eov_A 12 PYKCSDCGKSFTWKSRLRIHQKC-HTG-ERHSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHHH-HSC-CSSCCSCCC
T ss_pred CccCCccChhhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 4999999997 567889999865 443 366889998
No 66
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=94.57 E-value=0.034 Score=33.17 Aligned_cols=34 Identities=18% Similarity=0.055 Sum_probs=27.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2em9_A 12 PYNCKECGKSFRWASCLLKHQRV-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-GTS-CCCCSTTCC
T ss_pred CeECCccccccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999997 567889999876 443 467889998
No 67
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.56 E-value=0.033 Score=33.34 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=27.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2ep2_A 12 PYECSICGKSFTKKSQLHVHQQI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-TSS-CCSCCSCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999997 667889999875 543 367899998
No 68
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.56 E-value=0.034 Score=33.29 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=27.3
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2enc_A 12 PFKCEECGKGFYTNSQCYSHQRS-HSG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-SCC-SSCCSSCCC
T ss_pred CcCCCCCCCcCCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999997 677889999875 543 467899998
No 69
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.55 E-value=0.039 Score=39.35 Aligned_cols=51 Identities=22% Similarity=0.443 Sum_probs=39.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc--cccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI--Ca~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. -....|..|+...+. .+...|++ |..... .++..|+...++
T Consensus 34 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 89 (124)
T 1ubd_C 34 VHVCAECGKAFVESSKLKRHQLVHTG--EKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89 (124)
T ss_dssp CEECTTTCCEESSHHHHHHHGGGTSC--CCCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred CeECCCCCchhCCHHHHHHHHHHcCC--CCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence 5899999997 567889999886432 45678987 988744 588899876554
No 70
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=94.53 E-value=0.03 Score=36.96 Aligned_cols=47 Identities=21% Similarity=0.256 Sum_probs=38.4
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccc---cccccc--hhhhhhhhhhc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPV---CAKRVG--TDIVSHITMQH 95 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI---Ca~~v~--~d~v~Hlt~qH 95 (200)
.|.||+ |++. -....|..|+...+. ..|++ |..... .+|..|+...|
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKVHAG-----YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHS-----EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHHhCC-----CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 599999 9997 678899999987665 78999 988743 58999987655
No 71
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=94.51 E-value=0.027 Score=39.63 Aligned_cols=50 Identities=18% Similarity=0.373 Sum_probs=26.9
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH 95 (200)
.|.|++ |++. -....|..|+...+. .+...|++|..... .+|..|+...+
T Consensus 36 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~h~ 90 (119)
T 2jp9_A 36 PYQCDFKDCERRFSRSDQLKRHQRRHTG--VKPFQCKTCQRKFSRSDHLKTHTRTHT 90 (119)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHC--CCCEECTTTCCEESCHHHHHHHHHHHH
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHcCC--CCCccCCccCchhCCHHHHHHHHHHhc
Confidence 366663 6664 345566666655332 34456666666533 35666665433
No 72
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.51 E-value=0.032 Score=33.52 Aligned_cols=34 Identities=18% Similarity=0.052 Sum_probs=27.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~~~~~C~~C 46 (46)
T 2em5_A 12 SHQCHECGRGFTLKSHLNQHQRI-HT-GEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TS-CSCCSSCCCC
T ss_pred CeECCcCCCccCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 5999999997 577889999865 54 3466899998
No 73
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.48 E-value=0.033 Score=33.36 Aligned_cols=34 Identities=18% Similarity=0.141 Sum_probs=27.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emy_A 12 PYECHECGKAFSRKYQLISHQRT-HAG-EKPSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTT-SCCSCSSCC
T ss_pred CcCCCCCCcccCcHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 667889999877 433 467899998
No 74
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.46 E-value=0.029 Score=33.53 Aligned_cols=34 Identities=18% Similarity=0.069 Sum_probs=27.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epw_A 12 PCKCTECGKAFCWKSQLIMHQRT-HVD-DKHSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH-CCS-CCCSCCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4999999997 566889999876 543 466889998
No 75
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.46 E-value=0.015 Score=41.32 Aligned_cols=52 Identities=19% Similarity=0.271 Sum_probs=36.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhc-CCCCCCccccccccccc----chhhhhhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDED-HPIEAKNGVCPVCAKRV----GTDIVSHITMQH 95 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~e-H~~e~k~vVCPICa~~v----~~d~v~Hlt~qH 95 (200)
.|.|+.|++. .....|..|+... |..+.....|++|.... ..++..|+.+.+
T Consensus 19 ~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~ 76 (115)
T 2dmi_A 19 KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76 (115)
T ss_dssp SEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCC
T ss_pred CEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccC
Confidence 5999999997 6678899999861 33333334599998754 357888886544
No 76
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.43 E-value=0.038 Score=33.21 Aligned_cols=34 Identities=18% Similarity=0.152 Sum_probs=27.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytq_A 12 PYGCSECGKAFSSKSYLIIHMRT-HSG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHTT-TCC-SCSSCCCCC
T ss_pred CcCCCccChhhCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 4899999997 667889999876 543 466899998
No 77
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=94.41 E-value=0.031 Score=34.09 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=29.0
Q ss_pred ceecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccccc
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAK 81 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~ 81 (200)
..|.|+.|++. -....|..|+.. |. ..++-.|++|..
T Consensus 11 k~~~C~~C~k~f~~~~~L~~H~~~-H~-~~k~~~C~~C~k 48 (48)
T 2epr_A 11 KQVACEICGKIFRDVYHLNRHKLS-HS-GEKPYSSGPSSG 48 (48)
T ss_dssp CSEEETTTTEEESSHHHHHHHGGG-SC-SCCCCCSCCCCC
T ss_pred cCeeCCCCCcccCCHHHHHHHHHh-cC-CCCCccCCCCCC
Confidence 46999999997 577889999876 43 346789999963
No 78
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.41 E-value=0.035 Score=33.22 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=26.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~~~~~C~~C 46 (46)
T 2ytd_A 12 PYKCSECGKAFHRHTHLNEHRRI-HT-GYRPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HT-CCCSSCSSCC
T ss_pred CeECCCCCCeeCChHHHHHHHHH-cC-CCCCCCCCCC
Confidence 4999999997 567889999776 43 3467899998
No 79
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.41 E-value=0.04 Score=32.99 Aligned_cols=34 Identities=18% Similarity=0.153 Sum_probs=27.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~k~~~C~~C 46 (46)
T 2em7_A 12 PYKCEECGKGFICRRDLYTHHMV-HT-GEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHGGG-GT-TCCCSSTTCC
T ss_pred CccCCCccchhCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 5999999997 667889999876 43 3467899998
No 80
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=94.37 E-value=0.036 Score=33.28 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=26.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2emk_A 12 PYECKECGKAFSQTTHLIQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSCHHHHHHHHHH-HSS-CCCSSCCCC
T ss_pred ceECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 4999999997 667789999876 433 467899998
No 81
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.32 E-value=0.042 Score=32.86 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=26.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eml_A 12 PYECSVCGKAFSHRQSLSVHQRI-HSG-KKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GSS-CCCSCSSCC
T ss_pred CeeCCCcCCccCCHHHHHHHHHH-hcC-CCCCCCCCC
Confidence 4999999997 567788999876 433 466789998
No 82
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.30 E-value=0.029 Score=33.63 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=26.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|++|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~c 46 (46)
T 2emh_A 12 PYICTVCGKAFTDRSNLIKHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHH-HHC-SSCSSSCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999997 567889999875 433 467899998
No 83
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.26 E-value=0.03 Score=33.54 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=27.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ysp_A 12 PYKCEKCGKGYNSKFNLDMHQKV-HTG-ERPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESCHHHHHHHHTT-SCS-CCSSCCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHh-hCC-CCCCCCCCC
Confidence 5999999997 567889999876 443 466899998
No 84
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.26 E-value=0.025 Score=33.90 Aligned_cols=34 Identities=18% Similarity=0.123 Sum_probs=27.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2en6_A 12 PYGCNECGKTFSQKSILSAHQRT-HTG-EKPSGPSSG 46 (46)
T ss_dssp CEEETTTTEEESSHHHHHHHHHH-HSS-CCCSSSCCC
T ss_pred CeECCCCCcccCchHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 667889999887 443 467899998
No 85
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.25 E-value=0.039 Score=32.92 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=26.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~k~~~C~~C 46 (46)
T 2emm_A 12 PHKCNECGKSFIQSAHLIQHQRI-HT-GEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HS-CCCTTSSSCC
T ss_pred CeeCCCCChhhCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 5999999997 667889999876 43 3467889998
No 86
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.20 E-value=0.043 Score=32.75 Aligned_cols=34 Identities=18% Similarity=0.133 Sum_probs=27.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eq4_A 12 LYNCKECGKSFSRAPCLLKHERL-HSG-EKPSGPSSG 46 (46)
T ss_dssp CCCBTTTTBCCSCHHHHHHHHHH-CCS-SSCCCCCCC
T ss_pred CeECCCCCCccCchHHHHHHHHh-cCC-CCCCCCCCC
Confidence 4999999997 667889999876 543 467899998
No 87
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.17 E-value=0.035 Score=33.15 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=26.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2eoe_A 12 PYKCNECGKVFTQNSHLANHQRI-HTG-VKPSGPSSG 46 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHGG-GSC-CCSCSSCCC
T ss_pred CeECCCcChhhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 667888999865 543 367899998
No 88
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.16 E-value=0.023 Score=40.32 Aligned_cols=53 Identities=11% Similarity=0.056 Sum_probs=39.5
Q ss_pred cceecCCCCcccc---cHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhcc
Q 028989 42 NAMFLCPFCAEDF---DIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 42 r~~F~CPfC~e~f---D~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~ 96 (200)
+..+.|+.|+..| ....|..|+.. |.. .++-.|++|..... .+|..|+...|.
T Consensus 48 ~~~~~C~~C~~~f~f~~~~~l~~H~~~-H~~-~~~~~C~~C~k~f~~~~~L~~H~~~hh~ 105 (115)
T 2dmi_A 48 DNHETDNNNPKRWSKPRKRSLLEMEGK-EDA-QKVLKCMYCGHSFESLQDLSVHMIKTKH 105 (115)
T ss_dssp SCCCCCCCCCSCCSSCCCCCCCCCCCS-CCC-CSSCBCSSSCCBCSSHHHHHHHHHHTTT
T ss_pred CCCccCCCCCcccccccHHHHHHHhhc-cCC-CcceECCCCCCccCCHHHHHHHHHHhCC
Confidence 3456799999876 67788889866 433 46679999998754 589999875553
No 89
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.16 E-value=0.033 Score=33.36 Aligned_cols=34 Identities=24% Similarity=0.177 Sum_probs=26.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|++|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ytg_A 12 PFKCGECGKSYNQRVHLTQHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSSHHHHTTGGG-GSS-CCSSCSCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 566789999865 433 466889998
No 90
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.12 E-value=0.041 Score=32.82 Aligned_cols=34 Identities=18% Similarity=0.142 Sum_probs=26.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytr_A 12 PYKCNECGKAFSQTSKLARHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp TTCCTTTCCCCSSHHHHHHHHTT-TTT-CSCCCSCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 4899999997 567889999875 543 467889998
No 91
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.10 E-value=0.046 Score=32.71 Aligned_cols=34 Identities=26% Similarity=0.227 Sum_probs=26.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2epz_A 12 PFDCIDCGKAFSDHIGLNQHRRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHTT-TTT-CCCCSSCCC
T ss_pred CeECCCCCceeCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999997 567889999875 443 467889998
No 92
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=94.10 E-value=0.035 Score=33.33 Aligned_cols=34 Identities=21% Similarity=0.181 Sum_probs=26.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~k~~~C~~C 46 (46)
T 2ely_A 12 PFKCVECGKGFSRRSALNVHHKL-HT-GEKPSGPSSG 46 (46)
T ss_dssp SBCCSSSCCCBSSTTHHHHHHHH-HS-CCSSCSCCCC
T ss_pred CcccCccCcccCCHHHHHHHHHH-cC-CCCCCCCCCC
Confidence 5999999997 566888999876 43 3467899998
No 93
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.06 E-value=0.047 Score=32.76 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=26.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~-~~~~~~C~~C 46 (46)
T 2elz_A 12 PYKCEDCGKGYNRRLNLDMHQRV-HM-GEKTSGPSSG 46 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHGGG-GG-SCCCCCSCCC
T ss_pred CeeCcccCchhCCHHHHHHHHHh-cC-CCCCCCCCCC
Confidence 5999999997 567889999875 43 3466889998
No 94
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=94.03 E-value=0.048 Score=36.47 Aligned_cols=50 Identities=16% Similarity=0.375 Sum_probs=26.5
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCccccc--ccccccc--hhhhhhhhhhc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCP--VCAKRVG--TDIVSHITMQH 95 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCP--ICa~~v~--~d~v~Hlt~qH 95 (200)
.|.|++ |++. -....|..|+...+ ..+...|| +|..... .+|..|+...+
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~ 61 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLRTHT--GEKPYHCDWDGCGWKFARSDELTRHYRKHT 61 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHTTSC--SSCCEECCSTTTCCEESSHHHHHHHHHHHH
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHHhcC--CCCCcCCCCCCCCCccCCHHHHHHHHHHcC
Confidence 466666 6665 34556666665432 23445665 3665532 35666665433
No 95
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=94.03 E-value=0.046 Score=32.72 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=27.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2ep0_A 12 PYKCDVCHKSFRYGSSLTVHQRI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TSS-SCCCSCCCC
T ss_pred CeeCcccCcccCChHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999997 667889999875 543 467899998
No 96
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=94.02 E-value=0.056 Score=32.40 Aligned_cols=34 Identities=18% Similarity=0.206 Sum_probs=26.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2el6_A 12 PYKCSQCEKSFSGKLRLLVHQRM-HTR-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHGG-GCC-SSCCSCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 567889999776 443 466789998
No 97
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=93.93 E-value=0.063 Score=35.88 Aligned_cols=49 Identities=14% Similarity=0.299 Sum_probs=37.2
Q ss_pred ceecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhh
Q 028989 43 AMFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITM 93 (200)
Q Consensus 43 ~~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~ 93 (200)
..|.||+ |+.. -....|..|+...+ . .+...|++|..... .+|..|+..
T Consensus 34 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~-~~~~~C~~C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 34 KPYHCDWDGCGWKFARSDELTRHYRKHT-G-HRPFQCQKCDRAFSRSDHLALHMKR 87 (89)
T ss_dssp CCEECCSTTTCCEESSHHHHHHHHHHHH-C-CCCEECSSSSCEESSHHHHHHHGGG
T ss_pred CCcCCCCCCCCCccCCHHHHHHHHHHcC-C-CCCccCCCCCcccCCHHHHHHHHHh
Confidence 3599986 9997 57788999987543 3 35689999998744 588888753
No 98
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.87 E-value=0.054 Score=32.28 Aligned_cols=34 Identities=21% Similarity=0.138 Sum_probs=26.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 46 (46)
T 2en8_A 12 SHTCDECGKNFCYISALRIHQRV-HMG-EKCSGPSSG 46 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHTT-TCC-SCSSCCSCC
T ss_pred CeECCCcCcccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 5999999997 567889999865 543 467889998
No 99
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.79 E-value=0.054 Score=32.38 Aligned_cols=34 Identities=26% Similarity=0.199 Sum_probs=26.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+... . ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H-~-~~k~~~C~~C 46 (46)
T 2yso_A 12 SHQCRECGEIFFQYVSLIEHQVLH-M-GQKNSGPSSG 46 (46)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH-S-CCSCCCTTCC
T ss_pred CEEccccChhhCCHHHHHHHHHHh-C-CCCCCCCCCC
Confidence 5999999997 5678899998764 3 3466889998
No 100
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.78 E-value=0.055 Score=32.03 Aligned_cols=34 Identities=24% Similarity=0.250 Sum_probs=26.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~~~~~C~~C 44 (44)
T 2emx_A 10 PFGCSCCEKAFSSKSYLLVHQQT-HA-EEKPSGPSSG 44 (44)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HT-SSCSCSCCCC
T ss_pred CccCCCCCcccCCHHHHHHHHHH-hC-CCCCCCCCCC
Confidence 5999999997 667889999876 43 3466889988
No 101
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.78 E-value=0.039 Score=33.02 Aligned_cols=34 Identities=18% Similarity=0.184 Sum_probs=26.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~-~~k~~~C~~C 46 (46)
T 2emp_A 12 PYMCNECGKAFSVYSSLTTHQVI-HT-GEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESCHHHHHHHHHH-HH-CCSCCSCCCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cC-CCCCCCCCCC
Confidence 4999999997 667889999876 43 3467889998
No 102
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=93.77 E-value=0.11 Score=35.51 Aligned_cols=50 Identities=20% Similarity=0.377 Sum_probs=39.1
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH 95 (200)
.|.||+ |++. -....|..|+...+. .+.-.|++|..... .+|..|+.+.+
T Consensus 45 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~f~~~~~l~~H~~~H~ 99 (100)
T 2ebt_A 45 PYKCTWEGCDWRFARSDELTRHYRKHTG--AKPFQCGVCNRSFSRSDHLALHMKRHQ 99 (100)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHHHHTS--CCSCBCSSSCCBCSSHHHHHHHHHHHC
T ss_pred CeeCCCCCCCCccCCHHHHHHHHHHhCC--CCCeECCCCcCccCCHHHHHHHHHHhC
Confidence 599986 9997 677889999987543 45689999998744 58999987543
No 103
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.74 E-value=0.056 Score=32.29 Aligned_cols=34 Identities=21% Similarity=0.205 Sum_probs=26.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~~ 46 (46)
T 2ep3_A 12 PYRCAECGKAFTDRSNLFTHQKI-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHTT-TTT-SCCCCTTCC
T ss_pred CeECCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 667789999865 543 467889987
No 104
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.73 E-value=0.042 Score=33.00 Aligned_cols=34 Identities=18% Similarity=0.178 Sum_probs=26.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |. ..++-.|++|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~-~~k~~~C~~C 46 (46)
T 2eoo_A 12 PYGCNECGKNFGRHSHLIEHLKR-HF-REKSSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HH-STTSSCCSCC
T ss_pred CEEccccCcccCCHHHHHHHHHH-Hc-CCCCCCCCCC
Confidence 5999999997 567789999876 43 3466789998
No 105
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=93.70 E-value=0.041 Score=32.87 Aligned_cols=35 Identities=14% Similarity=0.320 Sum_probs=27.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCA 80 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa 80 (200)
.|.|+.|++. .....|..|+...+ ..+...||+|.
T Consensus 10 ~~~C~~C~k~f~~~~~l~~H~~~H~--~~~~~~C~~cg 45 (45)
T 2epq_A 10 PYSCPVCGLRFKRKDRMSYHVRSHD--GSVGKSGPSSG 45 (45)
T ss_dssp SSEETTTTEECSCHHHHHHHHHHHS--CCCCCCCCCCC
T ss_pred CCcCCCCCcccCCHHHHHHHHHHcc--CCCCCCCcCCC
Confidence 5899999997 57788999988753 35667999993
No 106
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.69 E-value=0.041 Score=33.02 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=26.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+... . ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H-~-~~~~~~C~~C 46 (46)
T 2em8_A 12 PYKCVECGKGYKRRLDLDFHQRVH-T-GEKLSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH-H-CCCCCCSCCC
T ss_pred CeECcccCchhCCHHHHHHHHHHH-c-CCCCCCCCCC
Confidence 5999999997 5678899998764 3 3466789998
No 107
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.55 E-value=0.042 Score=33.10 Aligned_cols=34 Identities=15% Similarity=0.061 Sum_probs=26.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2ytm_A 12 PYKCMECGKAFGDNSSCTQHQRL-HTG-QRPSGPSSG 46 (46)
T ss_dssp SSSBTTTTBCCSSHHHHHHHHHH-HHS-CCCCCCCCC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5899999997 567889999876 433 466899998
No 108
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.53 E-value=0.066 Score=32.08 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=26.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|++|++. -....|..|+... . ..++-.|+||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H-~-~~k~~~C~~~ 46 (46)
T 2em2_A 12 PFKCKECGKAFRQNIHLASHLRIH-T-GEKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH-C-CCCSSCSSCC
T ss_pred CEECCcCCchhCCHHHHHHHHHHh-C-CCCCCCCCCC
Confidence 5999999997 5678899998764 3 3466889987
No 109
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.50 E-value=0.06 Score=32.17 Aligned_cols=34 Identities=21% Similarity=0.163 Sum_probs=26.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2en1_A 12 PFKCEECGKRFTQNSQLHSHQRV-HTG-EKPSGPSSG 46 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHGGG-GSC-CCCSCCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCCC
Confidence 5999999997 567788999865 543 467889998
No 110
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=93.46 E-value=0.045 Score=41.54 Aligned_cols=52 Identities=21% Similarity=0.254 Sum_probs=42.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQHGN 97 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH~~ 97 (200)
.|.|++|++. .....|..|+.. |.. .++.+|++|..... .+|..|+...|+-
T Consensus 50 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~C~k~F~~~~~L~~H~~~hh~~ 104 (133)
T 2lt7_A 50 KYPCRYCEKVFPLAEYRTKHEIH-HTG-ERRYQCLACGKSFINYQFMSSHIKSVHSQ 104 (133)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH-HHT-CCCEEESSSCCEESSHHHHHHHHHHHTCC
T ss_pred CeeCCccCeecccccchhhhccc-cCC-CccccCCCCCCCcCCHHHHHHHhHHhcCC
Confidence 5999999997 567889999875 543 45689999999754 5999999888864
No 111
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.36 E-value=0.037 Score=33.13 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=26.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~C 46 (46)
T 2yu8_A 12 PYKCNECGKVFTQNSHLARHRRV-HTG-GKPSGPSSG 46 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHTHH-HHS-CCCSCSCCC
T ss_pred CeECCcCCchhCCHHHHHHHHHh-cCC-CCCCCCCCC
Confidence 5999999997 566888899875 433 366789998
No 112
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=93.16 E-value=0.037 Score=33.22 Aligned_cols=34 Identities=15% Similarity=0.118 Sum_probs=26.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+.|++. -....|..|+...+ ..++-.|++|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H~--~~k~~~C~~C 46 (46)
T 2ytt_A 12 PYQCSECGKSFSGSYRLTQHWITHT--REKPSGPSSG 46 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTHHH--HCCCCSCCCC
T ss_pred CeeCCCCCcccCCHHHHHHHHHHcC--CCCCCCCCCC
Confidence 4899999997 66788999987743 2456789998
No 113
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=92.89 E-value=0.098 Score=38.76 Aligned_cols=51 Identities=24% Similarity=0.314 Sum_probs=39.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc--cccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI--Ca~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|+.|++. -....|..|+...+. .+...|++ |..... .+|..|+...++
T Consensus 62 ~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~ 117 (155)
T 2rpc_A 62 WEECPREGKSFKAKYKLVNHIRVHTG--EKPFPCPFPGCGKIFARSENLKIHKRTHTG 117 (155)
T ss_dssp BTTCTTSSCCCSSHHHHHHHTHHHHC--CCSEECSCTTTCCEESCHHHHHHHHTTTCS
T ss_pred ccCCCCcccccCCHHHHHHHHHhcCC--CCcccCCcCCCCCccCCHHHHHHHHHhhCC
Confidence 3899999997 567889999987543 45678998 998754 589999976655
No 114
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=92.85 E-value=0.21 Score=32.39 Aligned_cols=50 Identities=20% Similarity=0.418 Sum_probs=37.5
Q ss_pred ccceecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccc--cccccc--hhhhhhhh
Q 028989 41 LNAMFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHIT 92 (200)
Q Consensus 41 ~r~~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI--Ca~~v~--~d~v~Hlt 92 (200)
....|.|++ |++. -....|..|+...+ ..+...|++ |..... .+|..|+.
T Consensus 14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~--~~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHT--GEKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp CCCCEECSSTTTCCEESSHHHHHHHHHHHS--SSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred ccCceeCCCCCCccccCCHHHHHHHHHhcC--CCCCccCCCCCCCcccCCHHHHHhHhh
Confidence 345799999 9997 56788999997643 346689976 998754 47888874
No 115
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=92.63 E-value=0.095 Score=36.76 Aligned_cols=51 Identities=24% Similarity=0.551 Sum_probs=40.0
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCccccc--ccccccc--hhhhhhhhhhcc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCP--VCAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCP--ICa~~v~--~d~v~Hlt~qH~ 96 (200)
.|.|++ |++. .....|..|+...+. .+...|+ +|..... .+|..|+...++
T Consensus 6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~ 63 (119)
T 2jp9_A 6 PFMCAYPGCNKRYFKLSHLQMHSRKHTG--EKPYQCDFKDCERRFSRSDQLKRHQRRHTG 63 (119)
T ss_dssp CBCCCSTTSCCCBSCHHHHHHHHHHHHT--TCCEECCSTTCCCEESSHHHHHHHHHHHHC
T ss_pred eeeCCCCCCcchhCCHHHHHHHHHhhCC--CCCccCCCCCCcCccCCHHHHHHHHHHcCC
Confidence 599998 9997 678899999986543 4567999 7998744 589999976554
No 116
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=92.14 E-value=0.11 Score=39.85 Aligned_cols=51 Identities=22% Similarity=0.417 Sum_probs=40.4
Q ss_pred eecC--CCCccc-ccHHHHHhhhhhcCCCCCCcccccc--cccccc--hhhhhhhhhhcc
Q 028989 44 MFLC--PFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV--CAKRVG--TDIVSHITMQHG 96 (200)
Q Consensus 44 ~F~C--PfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI--Ca~~v~--~d~v~Hlt~qH~ 96 (200)
.|.| +.|++. -....|..|+...+. .++..||+ |..... .+|..|+.+.+|
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~--~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~ 161 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFSHTQ--QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGGGSS--SCSSBCCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHHhCC--CCCccCCCCCCCchhcCHHHHHHHHHHhCC
Confidence 5899 779996 678889999886532 46679988 999854 589999987666
No 117
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=91.26 E-value=0.14 Score=31.98 Aligned_cols=27 Identities=26% Similarity=0.437 Sum_probs=24.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIE 70 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e 70 (200)
-|.||.|-++ -....|..|-+..|..+
T Consensus 5 GFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 5 GFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp EEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred ccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 5999999997 78889999999999864
No 118
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.49 E-value=0.1 Score=34.91 Aligned_cols=48 Identities=21% Similarity=0.481 Sum_probs=29.3
Q ss_pred CCccceecCCCCcccccHH-HH-Hhh-----hhhcCCCC-CCcccccccccccchh
Q 028989 39 DDLNAMFLCPFCAEDFDIV-GL-CCH-----IDEDHPIE-AKNGVCPVCAKRVGTD 86 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~-~L-c~H-----~~~eH~~e-~k~vVCPICa~~v~~d 86 (200)
++....+.||.|.+.+... .| |-| |...+-.. .....||+|...+..+
T Consensus 15 ~~~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 15 NKLQEEVICPICLDILQKPVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCCCCCBCTTTCSBCSSEEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred HhCccCCEeccCCcccCCeEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 4566688999999875432 11 223 33333222 3456899999887643
No 119
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.33 E-value=0.21 Score=29.70 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=24.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2em3_A 12 PYECKVCSKAFTQKAHLAQHQKT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHH-HCC-CCCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4899999997 567778889876 433 36677875
No 120
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=90.03 E-value=0.28 Score=29.00 Aligned_cols=33 Identities=15% Similarity=0.175 Sum_probs=24.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ep1_A 12 PYECSDCGKSFIKKSQLHVHQRI-HTG-ENPSGPSS 45 (46)
T ss_dssp SSCCSSSCCCCSSHHHHHHHHGG-GSS-SCCCSSSC
T ss_pred CcCCCCCCchhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4899999997 567788889876 443 35677875
No 121
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=89.48 E-value=0.2 Score=32.45 Aligned_cols=37 Identities=24% Similarity=0.503 Sum_probs=26.3
Q ss_pred eecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccccc
Q 028989 44 MFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 44 ~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~ 84 (200)
.|.||.|++.|....-.. ..|.. .++-.|++|.....
T Consensus 14 ~~~C~~C~k~F~~~~~l~---~~H~~-~k~~~C~~C~k~f~ 50 (62)
T 1vd4_A 14 SFKCPVCSSTFTDLEANQ---LFDPM-TGTFRCTFCHTEVE 50 (62)
T ss_dssp EEECSSSCCEEEHHHHHH---HEETT-TTEEBCSSSCCBCE
T ss_pred CccCCCCCchhccHHHhH---hhcCC-CCCEECCCCCCccc
Confidence 599999999876644322 55654 46789999987643
No 122
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=89.00 E-value=0.39 Score=28.32 Aligned_cols=33 Identities=18% Similarity=0.216 Sum_probs=24.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~p~~C~~ 45 (46)
T 2yts_A 12 PYICNECGKSFIQKSHLNRHRRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHGGG-TSS-CCSSCCCC
T ss_pred CEECCCCChhhCChHHHHHHHHh-cCC-CCCcCCCC
Confidence 5899999996 567788899764 543 35667875
No 123
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=88.93 E-value=0.27 Score=34.97 Aligned_cols=29 Identities=34% Similarity=0.827 Sum_probs=25.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAK 72 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k 72 (200)
.|.|++|++. .....|..|+...|+.|.+
T Consensus 56 ~~~C~~C~k~F~~~~~L~~H~~~~H~~E~R 85 (85)
T 2lv2_A 56 VFPCKYCPATFYSSPGLTRHINKCHPSENR 85 (85)
T ss_dssp SEECTTSSCEESSHHHHHHHHHTTCTTCCC
T ss_pred ccCCCCCCCEeCCHHHHHHhCcccCcCCCC
Confidence 5999999997 6889999999999998864
No 124
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.84 E-value=0.39 Score=28.42 Aligned_cols=33 Identities=18% Similarity=0.231 Sum_probs=24.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~~ 45 (46)
T 2emg_A 12 PFICSECGKVFTHKTNLIIHQKI-HTG-ERPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHTT-TSC-CCCSCSCC
T ss_pred CEECCccCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 5899999997 566788889765 443 35667875
No 125
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.83 E-value=0.43 Score=28.21 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=24.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|++|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emi_A 12 HYECSECGKAFIQKSTLSMHQRI-HRG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHGG-GCS-CCCCSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHhH-hCC-CCCCCCCC
Confidence 5899999997 567888899775 433 35667775
No 126
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.83 E-value=0.38 Score=28.36 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=24.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eow_A 12 PYKCNECGKAFRARSSLAIHQAT-HSG-EKPSGPSS 45 (46)
T ss_dssp CEECTTSCCEESSHHHHHHHHHH-HCC-CSCSCTTC
T ss_pred CeeccccCChhcCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 4899999997 567788889875 433 35667775
No 127
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.70 E-value=0.41 Score=28.24 Aligned_cols=33 Identities=21% Similarity=0.205 Sum_probs=24.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|++|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytf_A 12 PFECSECQKAFNTKSNLIVHQRT-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHT-SCS-SSSSCCCC
T ss_pred CcCCCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4899999997 567788889765 443 35567775
No 128
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.68 E-value=0.42 Score=28.27 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=23.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2enf_A 12 PYKCNECGKVFTQNSHLVRHRGI-HTG-EKPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHHTT-TTT-SSCCCCSC
T ss_pred CeECCCCCcccCCHHHHHHHHHh-hCC-CCCCCCCC
Confidence 5899999997 566788889764 443 35667875
No 129
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=88.68 E-value=0.58 Score=31.67 Aligned_cols=51 Identities=29% Similarity=0.509 Sum_probs=36.5
Q ss_pred ecCCC--Cccc-ccHHHHHhhhhhcCCCCC-----Cccccc--cccccc--chhhhhhhhhhc
Q 028989 45 FLCPF--CAED-FDIVGLCCHIDEDHPIEA-----KNGVCP--VCAKRV--GTDIVSHITMQH 95 (200)
Q Consensus 45 F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~-----k~vVCP--ICa~~v--~~d~v~Hlt~qH 95 (200)
|.|-. |++. -....|+.|+..+|-... ++.+|. -|.... ...|+.||+..|
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 34444 8886 456779999999997544 367887 787652 358999998776
No 130
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.67 E-value=0.021 Score=36.74 Aligned_cols=43 Identities=19% Similarity=0.217 Sum_probs=29.1
Q ss_pred eecCCCCcccccHH-HHHhhhhhcCCCCCCcccccccccccc--hhhhhhhhhhc
Q 028989 44 MFLCPFCAEDFDIV-GLCCHIDEDHPIEAKNGVCPVCAKRVG--TDIVSHITMQH 95 (200)
Q Consensus 44 ~F~CPfC~e~fD~~-~Lc~H~~~eH~~e~k~vVCPICa~~v~--~d~v~Hlt~qH 95 (200)
.|.|+.|++.|... .|.. .+...|++|..... .+|..|+...+
T Consensus 18 ~~~C~~C~k~f~~~~~l~~---------~~~~~C~~C~~~f~~~~~l~~H~~~H~ 63 (73)
T 2ctu_A 18 SQKCSKCGIIFIRRSTLSR---------RKTPMCEKCRKDSCQEAALNKDEGNES 63 (73)
T ss_dssp EEECSSSCCEEECCCCCCC---------SSSCCCHHHHHTCSCCCSSCCCSSCCC
T ss_pred CeeCCcccchhCCHHHhCc---------CCCCCCCCCChhhcCHHHHHHHHHhhc
Confidence 59999999875432 2322 56678999988743 47777775433
No 131
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=88.60 E-value=0.4 Score=28.48 Aligned_cols=33 Identities=21% Similarity=0.158 Sum_probs=24.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2emj_A 12 PFECAECGKSFSISSQLATHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH-HTT-SCSSSSCC
T ss_pred CEECCCCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4899999997 566788889876 433 35667875
No 132
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=88.41 E-value=0.34 Score=31.62 Aligned_cols=37 Identities=19% Similarity=0.325 Sum_probs=29.6
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
.|.|+. |++. -....|..|+...+ . .++-.|++|...
T Consensus 38 ~~~C~~~~C~k~f~~~~~L~~H~~~H~-~-~~~~~C~~C~k~ 77 (79)
T 2dlk_A 38 SFSCPEPACGKSFNFKKHLKEHMKLHS-D-TRDYICEFSGPS 77 (79)
T ss_dssp CEECSCTTTCCEESSHHHHHHHHHHHH-T-SCCCSCCSSSCC
T ss_pred CeECCCCCCcCccCCHHHHHHHHHHhC-C-CCCeeCCCCCCC
Confidence 599999 9997 57788999998653 2 466899999864
No 133
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.38 E-value=0.39 Score=28.43 Aligned_cols=33 Identities=18% Similarity=0.120 Sum_probs=23.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2yti_A 12 PYKCNECGKVFTQNSHLARHRGI-HTG-EKPSGPSS 45 (46)
T ss_dssp TTCCSSSCCCCSSHHHHHHHHTT-TSC-SCCSSTTC
T ss_pred CeECCCCCcccCChhHHHHHhHh-cCC-CCCCCCCC
Confidence 4899999997 566778888764 543 35667775
No 134
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.36 E-value=0.42 Score=28.39 Aligned_cols=33 Identities=18% Similarity=0.255 Sum_probs=23.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+... . ..++-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H-~-~~k~~~C~~ 45 (46)
T 2em4_A 12 PYECIECGKAFKTKSSLICHRRSH-T-GEKPSGPSS 45 (46)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHH-S-SSSCCCCCC
T ss_pred CcCCCCCCCccCCHHHHHHHHHhc-C-CCCCCCCCC
Confidence 4899999987 5567788897754 3 345677775
No 135
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.27 E-value=0.5 Score=27.94 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=23.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eq2_A 12 PYQCNECGKAFSQTSKLARHQRV-HTG-EKPSGPSS 45 (46)
T ss_dssp SSSCCSSCCCCSSHHHHHHHGGG-GCC-CCCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 4899999997 566778889865 443 35667775
No 136
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.27 E-value=0.43 Score=28.34 Aligned_cols=33 Identities=18% Similarity=0.158 Sum_probs=24.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2ytp_A 12 HYECSECGKAFARKSTLIMHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSC-CCCCSSCC
T ss_pred CeECCcCCcccCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 5899999997 567888899875 543 35677875
No 137
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.22 E-value=0.43 Score=28.44 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=24.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eon_A 12 PYKCQVCGKAFRVSSHLVQHHSV-HSG-ERPSGPSS 45 (46)
T ss_dssp SCBCSSSCCBCSSHHHHHHHTTT-TTS-CCSCTTSC
T ss_pred ccCCCCCCcccCcHHHHHHHHHh-cCC-CCCCCCCC
Confidence 5899999997 566778889865 543 35677875
No 138
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=88.02 E-value=0.45 Score=28.06 Aligned_cols=33 Identities=18% Similarity=0.163 Sum_probs=23.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2yrj_A 12 PYRCGECGKAFAQKANLTQHQRI-HTG-EKPSGPSS 45 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT-TSS-CCSSCSCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 4899999997 566788889765 433 35667775
No 139
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.95 E-value=0.52 Score=27.96 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=23.3
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2yth_A 12 PFQCEECGKRFTQNSHLHSHQRV-HTG-EKPSGPSS 45 (46)
T ss_dssp SBCCSSSCCCBSSHHHHHHHGGG-GTT-CCCSSCCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHh-cCC-CCCCCCCC
Confidence 4899999986 566778888765 433 35667764
No 140
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.95 E-value=0.47 Score=28.03 Aligned_cols=33 Identities=18% Similarity=0.130 Sum_probs=23.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|++|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eq1_A 12 PYKCNECGKAFRAHSNLTTHQVI-HTG-EKPSGPSS 45 (46)
T ss_dssp CCCCTTTTCCCSSHHHHHHHHTT-TCC-SCCSSCCC
T ss_pred CeECCcCChhhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4899999997 566788889764 533 35667765
No 141
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.58 E-value=0.53 Score=27.67 Aligned_cols=33 Identities=21% Similarity=0.280 Sum_probs=23.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. .....|..|+... . ..++-.|+|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~H-~-~~k~~~C~~ 43 (43)
T 2yrm_A 10 AFFCNECDCRFSEEASLKRHTLQT-H-SDKSGPSSG 43 (43)
T ss_dssp CBCCSSSCCCBSSHHHHHHHHHHH-T-CTTCSSSCC
T ss_pred CEECCCCCCeeCChHHHHHHHHhh-C-CCCCccCCC
Confidence 4899999997 5677888898764 3 245567775
No 142
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=87.47 E-value=0.19 Score=34.07 Aligned_cols=47 Identities=15% Similarity=0.212 Sum_probs=27.6
Q ss_pred CCCccceecCCCCcccccHHH--HHhh-----hhhcCCCCCCcccccccccccch
Q 028989 38 DDDLNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 38 d~d~r~~F~CPfC~e~fD~~~--Lc~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
+++....|.||.|.+.+.... -|-| |-..+- ......||+|...+..
T Consensus 2 ~~~~~~~~~C~IC~~~~~~Pv~~~CgH~fc~~Ci~~~~-~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 2 SPEFPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWL-DAGHKTCPKSQETLLH 55 (78)
T ss_dssp CCCCSSSSSCTTTSCCCSSEEEETTTEEEEHHHHHHHH-TTTCCBCTTTCCBCSS
T ss_pred CcCCcccCCCCCccccccCCEEcCCCCeecHHHHHHHH-HHCcCCCCCCcCCCCh
Confidence 456677899999988543321 1222 222221 2235789999998653
No 143
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.37 E-value=0.54 Score=27.85 Aligned_cols=33 Identities=18% Similarity=0.197 Sum_probs=23.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+... .. .++-.|+|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H-~~-~k~~~C~~ 45 (46)
T 2en9_A 12 LFKCNECKKTFTQSSSLTVHQRIH-TG-EKPSGPSS 45 (46)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHH-TS-SCCCSCCC
T ss_pred CEECCccCcccCCHHHHHHHHHHc-CC-CCCCCCCC
Confidence 5899999997 5667788897764 32 35667775
No 144
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=87.30 E-value=0.36 Score=28.48 Aligned_cols=33 Identities=15% Similarity=0.070 Sum_probs=23.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+... .. .++-.|||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H-~~-~kp~~C~~ 45 (46)
T 2eor_A 12 PYNCEECGKAFIHDSQLQEHQRIH-TG-EKPSGPSS 45 (46)
T ss_dssp SEECTTTCCEESSHHHHHHHHHHH-HS-CCCSSSTT
T ss_pred CccCCCCCCCcCCHHHHHHHHHhc-CC-CCCCCCCC
Confidence 4899999987 5667788887654 32 35567775
No 145
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=87.01 E-value=0.35 Score=32.57 Aligned_cols=47 Identities=23% Similarity=0.417 Sum_probs=29.4
Q ss_pred CCccceecCCCCcccccHHH-------HHhhhhhcCCCC-----CCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAEDFDIVG-------LCCHIDEDHPIE-----AKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~-------Lc~H~~~eH~~e-----~k~vVCPICa~~v~~ 85 (200)
++....+.||.|.+.+.... .|..|-..+-.. .....||+|...+..
T Consensus 7 ~~~~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 7 GNVQEEVTCPICLELLTEPLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCCCCEETTTTEECSSCCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred hhcccCCCCcCCCcccCCeeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 45566789999998755431 233344444333 236789999998764
No 146
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=87.01 E-value=0.71 Score=32.64 Aligned_cols=40 Identities=15% Similarity=0.109 Sum_probs=28.6
Q ss_pred CCccceecCCCCcc------------cccHHHHHhhhhhcCCCCCCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAE------------DFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e------------~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
.+.+.+|.||.|.+ .|+...+..|+.. +..||+|...+..
T Consensus 9 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 9 SDAPDEFRDPLMDTLMTDPVRLPSGTVMDRSIILRHLLN-------SPTDPFNRQMLTE 60 (85)
T ss_dssp TTCCTTTBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHH-------CSBCTTTCCBCCG
T ss_pred hcCchheECcccCchhcCCeECCCCCEECHHHHHHHHhc-------CCCCCCCcCCCCh
Confidence 45677899998765 3556667777763 3689999988654
No 147
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.73 E-value=0.47 Score=28.02 Aligned_cols=33 Identities=24% Similarity=0.313 Sum_probs=23.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|++|++. -....|..|+.. |.. .+.-.||+
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (45)
T 2epu_A 12 PFECTHCGKSFRAKGNLVTHQRI-HTG-EKSGPSSG 45 (45)
T ss_dssp SEEETTTTEEESSHHHHHHHHTT-TSS-CCCCCSCC
T ss_pred CccCCCCCCccCChHHHHHHHHH-hCC-CCCCCCCC
Confidence 5899999997 556778889765 443 35667775
No 148
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=86.70 E-value=0.44 Score=25.10 Aligned_cols=26 Identities=23% Similarity=0.379 Sum_probs=19.1
Q ss_pred eecCCCCcccc-cHHHHHhhhhhcCCC
Q 028989 44 MFLCPFCAEDF-DIVGLCCHIDEDHPI 69 (200)
Q Consensus 44 ~F~CPfC~e~f-D~~~Lc~H~~~eH~~ 69 (200)
.|.|+.|+..| ....|..|+...|..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~ 28 (30)
T 1paa_A 2 AYACGLCNRAFTRRDLLIRHAQKIHSG 28 (30)
T ss_dssp CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred CcCCcccCcccCChHHHHHHHHHHccC
Confidence 37899999874 567788886666654
No 149
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=86.63 E-value=0.46 Score=28.18 Aligned_cols=33 Identities=12% Similarity=0.130 Sum_probs=23.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|++|++. -....|..|+... .. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H-~~-~~~~~C~~ 45 (46)
T 2eoz_A 12 PYSCNVCGKAFVLSAHLNQHLRVH-TQ-ETLSGPSS 45 (46)
T ss_dssp SEEETTTTEEESSHHHHHHHHHHH-SS-CCSSSCCC
T ss_pred CeECcccChhhCCHHHHHHHHHHh-CC-CCCCCCCC
Confidence 4899999986 6677888898764 32 35567764
No 150
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=86.59 E-value=0.14 Score=35.23 Aligned_cols=46 Identities=22% Similarity=0.501 Sum_probs=27.5
Q ss_pred CCCccceecCCCCcccccHHHH--Hhh-----hhhcCCCCCCcccccccccccch
Q 028989 38 DDDLNAMFLCPFCAEDFDIVGL--CCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 38 d~d~r~~F~CPfC~e~fD~~~L--c~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
+++....+.||.|.+.+....+ |-| |-..+- .+...||+|...+..
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~ 61 (81)
T 2csy_A 9 SEEEEIPFRCFICRQAFQNPVVTKCRHYFCESCALEHF--RATPRCYICDQPTGG 61 (81)
T ss_dssp SSCCCCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHH--HHCSBCSSSCCBCCS
T ss_pred cccCCCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHH--HCCCcCCCcCccccc
Confidence 4556678999999886543321 333 222211 124589999998763
No 151
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=86.52 E-value=0.3 Score=35.98 Aligned_cols=45 Identities=18% Similarity=0.477 Sum_probs=29.9
Q ss_pred CCCCCCCCC-CccceecCCCCccc--ccHHHHHhhhhhcCCCCCCcccccccccccc
Q 028989 31 GYDETDGDD-DLNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 31 g~ee~e~d~-d~r~~F~CPfC~e~--fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~ 84 (200)
.+||++-++ +..-.|+|| ||.. +....|... .--+.||-|+-+|-
T Consensus 16 ~LeDm~~de~~~~y~y~Cr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 63 (83)
T 1wge_A 16 EIEDFQYDEDSETYFYPCP-CGDNFAITKEDLENG--------EDVATCPSCSLIIK 63 (83)
T ss_dssp EGGGSCCBTTTTEEEECCS-SSSCEEEEHHHHHTT--------CCEEECTTTCCEEE
T ss_pred EHHHceEccCCCEEEEeCC-CCCEEEECHHHHhCC--------CEEEECCCCceEEE
Confidence 345554433 345689999 9984 777777431 12578999999754
No 152
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=86.15 E-value=0.78 Score=26.40 Aligned_cols=32 Identities=16% Similarity=0.172 Sum_probs=21.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCP 77 (200)
.|.|+.|++. -....|..|+.. |.. .++-.||
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~ 42 (42)
T 2el5_A 10 PYECSECGKAFNRKDQLISHQRT-HAG-ESGPSSG 42 (42)
T ss_dssp SEECSSSCCEESSHHHHHHHHGG-GCC-CCSCCCC
T ss_pred CccCCCcChhhCCHHHHHHHHHh-cCC-CCCCCCC
Confidence 4888888886 556778888765 433 2445564
No 153
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.63 E-value=0.76 Score=27.20 Aligned_cols=33 Identities=18% Similarity=0.235 Sum_probs=23.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2em6_A 12 CYKCDVCGKEFSQSSHLQTHQRV-HTG-EKPSGPSS 45 (46)
T ss_dssp CCBCSSSCCBCSSHHHHHHHHTT-TSS-SCCCCTTC
T ss_pred CeECCCCCcccCCHHHHHHHHHH-cCC-CCCCCCCC
Confidence 4899999997 466788889764 543 35667765
No 154
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=85.33 E-value=0.75 Score=33.61 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=26.0
Q ss_pred CCccceecCCCCccc-------------ccHHHHHhhhhhcCCCCCCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAED-------------FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~-------------fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
.+.+.+|.||.|.+- |+...+..|+.. +..||+|...+..
T Consensus 17 ~~~p~~~~CpI~~~~m~dPV~~~cG~htf~r~cI~~~l~~-------~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 17 ADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLS-------DQTDPFNRSPLTM 69 (98)
T ss_dssp CSCCTTTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHTTT-------SCBCTTTCSBCCT
T ss_pred hcCcHhcCCcCccccccCCeECCCCCeEECHHHHHHHHHh-------CCCCCCCCCCCCh
Confidence 456789999998763 333333344432 4689999998664
No 155
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.28 E-value=0.68 Score=27.40 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=23.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |....++-.|+|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~~~~C~~ 46 (46)
T 2eoy_A 12 CFKCNKCEKTFSCSKYLTQHERI-HTRGVKSGPSSG 46 (46)
T ss_dssp CEECSSSCCEESSSHHHHHHHTT-CCSCCTTSSSCC
T ss_pred CEECcCCCCcCCCHHHHHHHHHH-cCCCCCCCCCCC
Confidence 5899999987 556788888754 543145567765
No 156
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=85.06 E-value=0.32 Score=36.31 Aligned_cols=46 Identities=17% Similarity=0.467 Sum_probs=30.4
Q ss_pred CCCCCCCCC-CccceecCCCCccc--ccHHHHHhhhhhcCCCCCCcccccccccccch
Q 028989 31 GYDETDGDD-DLNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 31 g~ee~e~d~-d~r~~F~CPfC~e~--fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
.+||++-++ +..-+|+|| ||.. +....|... .--+.||-|+-+|..
T Consensus 9 ~LeDm~~de~~~~y~ypCr-CGd~F~IteedLe~g--------e~iv~C~sCSL~IkV 57 (89)
T 2jr7_A 9 EIEDFQYDEDSETYFYPCP-CGDNFSITKEDLENG--------EDVATCPSCSLIIKV 57 (89)
T ss_dssp ETTTSEEETTTTEEEEECT-TSSEEEEEHHHHHHT--------CCEEECTTTCCEEEE
T ss_pred EHHHcEEcCCCCEEEEcCC-CCCEEEECHHHHhCC--------CEEEECCCCccEEEE
Confidence 345554333 345689999 9984 777777531 125789999998643
No 157
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=85.05 E-value=0.63 Score=30.54 Aligned_cols=29 Identities=28% Similarity=0.537 Sum_probs=24.9
Q ss_pred ceecCCCCccc-ccHHHHHhhhhhcCCCCC
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEA 71 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~ 71 (200)
..|.|+.|++. -....|..|+...|..+.
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 36999999997 578899999999998764
No 158
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=85.02 E-value=0.85 Score=26.94 Aligned_cols=34 Identities=21% Similarity=0.097 Sum_probs=26.4
Q ss_pred eecCC--CCccc-ccHHHHHhhhhhcCCCCCCccccccc
Q 028989 44 MFLCP--FCAED-FDIVGLCCHIDEDHPIEAKNGVCPVC 79 (200)
Q Consensus 44 ~F~CP--fC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPIC 79 (200)
.|.|+ .|++. .....|..|+.. |.. .++-.|++|
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~C 48 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS-HSG-VKPSGPSSG 48 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT-SCC-CCSCSSCCC
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH-hCC-CCCCCCCCC
Confidence 58997 89997 567889999876 443 466789988
No 159
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.75 E-value=0.56 Score=29.67 Aligned_cols=18 Identities=22% Similarity=0.486 Sum_probs=13.0
Q ss_pred CCccceecCCCCcccccH
Q 028989 39 DDLNAMFLCPFCAEDFDI 56 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~ 56 (200)
++....+.||.|.+.+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~ 27 (58)
T 2ecj_A 10 ENLQVEASCSVCLEYLKE 27 (58)
T ss_dssp SCSCCCCBCSSSCCBCSS
T ss_pred hccccCCCCccCCcccCc
Confidence 455667899999887554
No 160
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.75 E-value=0.82 Score=27.11 Aligned_cols=33 Identities=12% Similarity=0.029 Sum_probs=23.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+... .. .++-.|.|
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H-~~-~k~~~C~~ 45 (46)
T 2eom_A 12 GHRCSDCGKFFLQASNFIQHRRIH-TG-EKPSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHHH-SS-CCCSSCCC
T ss_pred CcCCCCCCCeeCChHHHHHHHHHh-CC-CCCCCCCC
Confidence 4899999987 4567888887764 32 35566764
No 161
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=84.69 E-value=0.93 Score=29.75 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=30.2
Q ss_pred ceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
..|.|+.|++. -....|..|+...|. .+...|++|...
T Consensus 46 ~~~~C~~C~~~f~~~~~L~~H~~~h~~--~~~~~~~~~~~~ 84 (86)
T 1x6h_A 46 AAFVCSKCGKTFTRRNTMARHADNCAG--PDGVEGENSGPS 84 (86)
T ss_dssp CCEECSSSCCEESCHHHHHHHHHHCCC--CCSCCCCCCCCC
T ss_pred cceECCCCCChhCCHHHHHHHHHHccC--CCCcccCCCCCC
Confidence 46999999997 578899999988765 345689988753
No 162
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=84.33 E-value=0.8 Score=28.36 Aligned_cols=28 Identities=18% Similarity=0.207 Sum_probs=23.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEA 71 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~ 71 (200)
.|.|+.|++. -....|..|+...|..+.
T Consensus 30 ~~~C~~C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 30 PYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp SEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred CccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence 5999999997 577899999988887654
No 163
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=84.18 E-value=1.3 Score=32.39 Aligned_cols=40 Identities=15% Similarity=0.112 Sum_probs=27.3
Q ss_pred CCccceecCCCCccc------------ccHHHHHhhhhhcCCCCCCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAED------------FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~------------fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
.+.+..|.||.|.+- |+...+..|+.. +..||+|...+..
T Consensus 24 ~~~p~~~~CpI~~~~m~dPV~~~cGhtf~r~~I~~~l~~-------~~~cP~~~~~l~~ 75 (100)
T 2kre_A 24 SDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLN-------SPTDPFNRQTLTE 75 (100)
T ss_dssp SSCSTTTBCTTTCSBCSSEEEETTTEEEEHHHHHHHTTS-------CSBCSSSCCBCCT
T ss_pred ccCcHhhCCcCccCcccCCeECCCCCEEchHHHHHHHHc-------CCCCCCCCCCCCh
Confidence 456789999998752 444455555542 4689999998653
No 164
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=84.12 E-value=0.91 Score=35.37 Aligned_cols=34 Identities=15% Similarity=0.202 Sum_probs=28.4
Q ss_pred CccceecCCCCccc-ccHHHHHhhhhhcCCCCCCc
Q 028989 40 DLNAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKN 73 (200)
Q Consensus 40 d~r~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~ 73 (200)
+....+.|=||.+. =+...+..||.+.|-++-..
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~~~ 45 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQFNIDS 45 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHHSSCCCHHH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHHhcCCCHHH
Confidence 44456999999996 58999999999999997654
No 165
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=84.08 E-value=0.7 Score=23.95 Aligned_cols=23 Identities=30% Similarity=0.642 Sum_probs=16.2
Q ss_pred ecCCCCcccc-cHHHHHhhhhhcC
Q 028989 45 FLCPFCAEDF-DIVGLCCHIDEDH 67 (200)
Q Consensus 45 F~CPfC~e~f-D~~~Lc~H~~~eH 67 (200)
|.|+.|+..| ....|..|+...|
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~h~ 26 (30)
T 1klr_A 3 YQCQYCEFRSADSSNLKTHIKTKH 26 (30)
T ss_dssp CCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred ccCCCCCCccCCHHHHHHHHHHHc
Confidence 6788888864 5567777776654
No 166
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=83.94 E-value=0.11 Score=36.36 Aligned_cols=46 Identities=24% Similarity=0.541 Sum_probs=28.5
Q ss_pred CCCccceecCCCCcccccH-HHH--Hhh-----hhhcCCCCCCccccccccccc
Q 028989 38 DDDLNAMFLCPFCAEDFDI-VGL--CCH-----IDEDHPIEAKNGVCPVCAKRV 83 (200)
Q Consensus 38 d~d~r~~F~CPfC~e~fD~-~~L--c~H-----~~~eH~~e~k~vVCPICa~~v 83 (200)
.++....|.||.|.+.|.. +.| |-| |-..+-.......||+|...+
T Consensus 7 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 7 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp CCCCCTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cccCCcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 3566778999999986432 222 334 333332233446899999885
No 167
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=83.76 E-value=1 Score=26.04 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=21.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCP 77 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~ 44 (44)
T 2eof_A 12 PYECNECQKAFNTKSNLMVHQRT-HTG-ESGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHHHH-TTT-SSCSCCC
T ss_pred CeECCCCCcccCCHhHHHHHHHH-hCC-CCCCCCC
Confidence 4889999886 566778888765 433 3445564
No 168
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=83.10 E-value=0.93 Score=35.23 Aligned_cols=45 Identities=29% Similarity=0.456 Sum_probs=22.7
Q ss_pred eecCC--CCcccccHHHHHhhhhhcCCCCCCcccccccccccc-hhhhhhh
Q 028989 44 MFLCP--FCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG-TDIVSHI 91 (200)
Q Consensus 44 ~F~CP--fC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~-~d~v~Hl 91 (200)
...|| -|.+.+....|..|.. + -+-+.+.||-|...+. .++..|+
T Consensus 82 ~v~C~n~GC~~~~~~~~l~~H~~-~--C~~~~v~C~~C~~~~~r~~l~~H~ 129 (170)
T 3hcs_A 82 MVKCPNEGCLHKMELRHLEDHQA-H--CEFALMDCPQCQRPFQKFHINIHI 129 (170)
T ss_dssp EEECCSTTCCCEEEGGGHHHHHT-T--CTTSEEECTTTCCEEEGGGHHHHH
T ss_pred ccCCCCCCCCceecHhHHHHHHh-c--CCceeeECCCCChHHHHHHHHHHh
Confidence 34554 3555566666666642 1 1123455666665433 3555565
No 169
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.98 E-value=0.56 Score=27.80 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=21.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+... . ..++-.|++
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H-~-~~k~~~C~~ 45 (46)
T 2emz_A 12 PFKCNECGKGFGRRSHLAGHLRLH-S-REKSSGPSS 45 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHHH-H-HTTCCCSCC
T ss_pred CeECCCCCcccCCHHHHHHHHHHh-C-CCCCCCCCC
Confidence 4888888886 5566777887653 2 234556664
No 170
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.82 E-value=1.1 Score=26.44 Aligned_cols=32 Identities=19% Similarity=0.224 Sum_probs=22.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCP 77 (200)
.|.|+.|++. -....|..|+.. |.. .++-.||
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2eoh_A 12 PYECKECRKTFIQIGHLNQHKRV-HTG-ERSSGPS 44 (46)
T ss_dssp SCCCSSSCCCCSSHHHHHHHHHH-CSS-CCSCSTT
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCC
Confidence 4889999986 556778888765 433 3556665
No 171
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.43 E-value=0.89 Score=26.69 Aligned_cols=33 Identities=18% Similarity=0.134 Sum_probs=22.3
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+.
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2eq3_A 12 PYECNQCGKAFSVRSSLTTHQAI-HTG-KKPSGPSS 45 (46)
T ss_dssp SSEETTTTEECSSHHHHHHHHTT-SCC-CCCCCSCC
T ss_pred CeECCCCChhhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4889999986 556778888765 433 34556653
No 172
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=82.41 E-value=0.36 Score=35.50 Aligned_cols=44 Identities=18% Similarity=0.482 Sum_probs=28.8
Q ss_pred CCCCCCCC-CccceecCCCCccc--ccHHHHHhhhhhcCCCCCCcccccccccccc
Q 028989 32 YDETDGDD-DLNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 32 ~ee~e~d~-d~r~~F~CPfC~e~--fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~ 84 (200)
+||++-++ +..-+|+|| ||.. +....|... ---+.||-|+-+|-
T Consensus 10 leDm~~de~~~~y~ypCr-CGd~F~it~edL~~g--------e~iv~C~sCSL~I~ 56 (83)
T 1yop_A 10 IEDMTFEPENQMFTYPCP-CGDRFQIYLDDMFEG--------EKVAVCPSCSLMID 56 (83)
T ss_dssp GGGSEEETTTTEEEEEET-TTEEEEEEHHHHHTT--------CCEEECSSSCCEEE
T ss_pred HHHcEEcCCCCEEEEeCC-CCCeEEECHHHHhCC--------CEEEECCCCccEEE
Confidence 44444333 335689999 9974 777777421 22478999999754
No 173
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.23 E-value=1.2 Score=25.67 Aligned_cols=32 Identities=16% Similarity=0.201 Sum_probs=21.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCP 77 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~ 44 (44)
T 2en7_A 12 PYVCNECGKAFRSKSYLIIHTRT-HTG-ESGPSSG 44 (44)
T ss_dssp SSCCTTTCCCCSSHHHHHHHHTT-TCC-SSSSCCC
T ss_pred CeECCCCCCccCCHHHHHHHhhh-cCC-CCCCCCC
Confidence 4889999886 556778888754 433 2445554
No 174
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.18 E-value=1.2 Score=26.28 Aligned_cols=33 Identities=18% Similarity=0.195 Sum_probs=21.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPV 78 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPI 78 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+.
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~-H~~-~k~~~C~~ 45 (46)
T 2enh_A 12 PYECDVCRKAFSHHASLTQHQRV-HSG-EKPSGPSS 45 (46)
T ss_dssp SCBCTTTCCBCSSSHHHHHHGGG-SCC-SCCCCCCC
T ss_pred CcCCCCcCchhCCHHHHHHHHHH-hCC-CCCCCCCC
Confidence 4889999887 455678888765 433 35566653
No 175
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=82.09 E-value=1.5 Score=25.01 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=20.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVC 76 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVC 76 (200)
.|.|+.|++. -....|..|+.. |..+ ++-.|
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~-H~~~-~~~~C 41 (42)
T 2yte_A 10 PYSCAECKETFSDNNRLVQHQKM-HTVK-SGPSS 41 (42)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH-TSCC-SSCCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-hCCC-CCCCC
Confidence 4788888886 556777788765 4432 34444
No 176
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.01 E-value=0.41 Score=31.15 Aligned_cols=17 Identities=24% Similarity=0.794 Sum_probs=12.9
Q ss_pred CCccceecCCCCccccc
Q 028989 39 DDLNAMFLCPFCAEDFD 55 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD 55 (200)
++....+.||.|.+.+.
T Consensus 15 ~~~~~~~~C~IC~~~~~ 31 (63)
T 2ysj_A 15 NKLQEEVICPICLDILQ 31 (63)
T ss_dssp CCCCCCCBCTTTCSBCS
T ss_pred HhCccCCCCCcCCchhC
Confidence 45667889999988654
No 177
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=81.96 E-value=0.61 Score=30.76 Aligned_cols=35 Identities=23% Similarity=0.727 Sum_probs=21.6
Q ss_pred ceecCCCCcccccHHHHHhhhhhcCCCCCCcc--cccccccc
Q 028989 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNG--VCPVCAKR 82 (200)
Q Consensus 43 ~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~v--VCPICa~~ 82 (200)
..|.|+.|+-.+|...= +..+++.-+- +||+|.+.
T Consensus 3 ~~y~C~vCGyvyd~~~G-----d~t~f~~lP~dw~CP~Cg~~ 39 (46)
T 6rxn_A 3 QKYVCNVCGYEYDPAEH-----DNVPFDQLPDDWCCPVCGVS 39 (46)
T ss_dssp CCEEETTTCCEECGGGG-----TTCCGGGSCTTCBCTTTCCB
T ss_pred CEEECCCCCeEEeCCcC-----CCcchhhCCCCCcCcCCCCc
Confidence 35789999877775311 0045544443 89999875
No 178
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.95 E-value=1.5 Score=25.53 Aligned_cols=32 Identities=16% Similarity=0.152 Sum_probs=21.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCP 77 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~ 44 (44)
T 2emb_A 12 RYECSKCQATFNLRKHLIQHQKT-HAA-KSGPSSG 44 (44)
T ss_dssp SEECTTTCCEESCHHHHHHHGGG-GCC-CCCTTCC
T ss_pred CeECCCCCCccCCHHHHHHHHHH-cCC-CCCcCCC
Confidence 4889999986 566778888764 432 3444553
No 179
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=81.55 E-value=1.3 Score=26.16 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=21.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCP 77 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~k~~~C~ 44 (46)
T 2yto_A 12 PYKCSDCGKAFTRKSGLHIHQQS-HTG-ERHSGPS 44 (46)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HTC-CCBTTTB
T ss_pred CEECcccCCccCCHhHHHHHHHH-cCC-CCCCCCC
Confidence 4888888886 566778888765 432 3455665
No 180
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=81.46 E-value=1.1 Score=23.19 Aligned_cols=22 Identities=23% Similarity=0.412 Sum_probs=16.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 2 ~~~C~~C~~~f~~~~~l~~H~~~ 24 (29)
T 1ard_A 2 SFVCEVCTRAFARQEHLKRHYRS 24 (29)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHH
Confidence 3789999886 456777788765
No 181
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=81.02 E-value=0.91 Score=27.71 Aligned_cols=24 Identities=25% Similarity=0.606 Sum_probs=20.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDH 67 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH 67 (200)
.|.|++|+.. -....|..|+...|
T Consensus 32 ~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 32 PYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CcCCCCCcchhCCHHHHHHHHHHhc
Confidence 4999999997 57888999998877
No 182
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=80.82 E-value=0.34 Score=32.67 Aligned_cols=47 Identities=23% Similarity=0.373 Sum_probs=27.1
Q ss_pred CCccceecCCCCcccccHHH--HHhh-----hhhcCC----CCCCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAEDFDIVG--LCCH-----IDEDHP----IEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~--Lc~H-----~~~eH~----~e~k~vVCPICa~~v~~ 85 (200)
++....+.||.|.+.+.... -|-| |-..+- .+.....||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 14 EMIKEEVTCPICLELLKEPVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp CCCCTTTSCTTTCSCCSSCEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred HhCccCCCCcCCChhhCcceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 34556789999988654321 1333 222211 12346789999988764
No 183
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=80.44 E-value=0.38 Score=32.55 Aligned_cols=47 Identities=30% Similarity=0.692 Sum_probs=28.7
Q ss_pred CCccceecCCCCcccccHHH-----HHhhhhhcCCCC---CCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAEDFDIVG-----LCCHIDEDHPIE---AKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~-----Lc~H~~~eH~~e---~k~vVCPICa~~v~~ 85 (200)
++....+.||.|.+.|+... -|.|+-=.++.. .+...||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 64 (78)
T 2ect_A 10 EHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTG 64 (78)
T ss_dssp TTSSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCC
T ss_pred ccCCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCC
Confidence 34455779999988765321 366653333332 133589999887654
No 184
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.08 E-value=1.1 Score=24.83 Aligned_cols=23 Identities=22% Similarity=0.444 Sum_probs=18.3
Q ss_pred eecCCCCccc-ccHHHHHhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDED 66 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~e 66 (200)
.|.|++|++. -....|..|+...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~H 32 (36)
T 2els_A 9 IFTCEYCNKVFKFKHSLQAHLRIH 32 (36)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CEECCCCCceeCCHHHHHHHHHHh
Confidence 6999999997 5667888887653
No 185
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.79 E-value=1.7 Score=29.56 Aligned_cols=48 Identities=31% Similarity=0.573 Sum_probs=27.0
Q ss_pred CCccceecCCCCcccccH----H-HH-Hhh-----hhhcCCC-CCCcccccccccccchh
Q 028989 39 DDLNAMFLCPFCAEDFDI----V-GL-CCH-----IDEDHPI-EAKNGVCPVCAKRVGTD 86 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~----~-~L-c~H-----~~~eH~~-e~k~vVCPICa~~v~~d 86 (200)
++....+.||.|.+.|+. . .| |-| |-...-. ......||+|...+..+
T Consensus 10 ~~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 10 DALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CCCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred hhccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 345557889999987665 1 11 222 1111110 02357899999887654
No 186
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=79.72 E-value=1.3 Score=22.87 Aligned_cols=22 Identities=23% Similarity=0.599 Sum_probs=16.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCSLCPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECSSSSCEESSHHHHHHHHHH
T ss_pred CccCCCcChhhCCHHHHHHHHHH
Confidence 4889999987 456778888754
No 187
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=79.62 E-value=2 Score=35.12 Aligned_cols=42 Identities=12% Similarity=0.147 Sum_probs=30.5
Q ss_pred CCCccceecCCCCcc------------cccHHHHHhhhhhcCCCCCCcccccccccccch
Q 028989 38 DDDLNAMFLCPFCAE------------DFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 38 d~d~r~~F~CPfC~e------------~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
..+.+..|.||.|.+ .|+...+..|+...+ ..||+|...+..
T Consensus 100 ~~~ip~~f~CPI~~elm~DPV~~~~Ghtfer~~I~~~l~~~~------~tcP~t~~~l~~ 153 (179)
T 2f42_A 100 KREIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVG------HFDPVTRSPLTQ 153 (179)
T ss_dssp CCCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHHHHTC------SBCTTTCCBCCG
T ss_pred ccCCcHhhcccCccccCCCCeECCCCCEECHHHHHHHHHhCC------CCCCCCcCCCCh
Confidence 346778999999754 467777888887632 169999988654
No 188
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=79.28 E-value=1.6 Score=22.24 Aligned_cols=21 Identities=24% Similarity=0.607 Sum_probs=14.7
Q ss_pred ecCCCCcccc-cHHHHHhhhhh
Q 028989 45 FLCPFCAEDF-DIVGLCCHIDE 65 (200)
Q Consensus 45 F~CPfC~e~f-D~~~Lc~H~~~ 65 (200)
|.|+.|++.| ....|..|+..
T Consensus 2 ~~C~~C~k~f~~~~~l~~H~~~ 23 (27)
T 1znf_A 2 YKCGLCERSFVEKSALSRHQRV 23 (27)
T ss_dssp CBCSSSCCBCSSHHHHHHHGGG
T ss_pred ccCCCCCCcCCCHHHHHHHHHH
Confidence 6788888864 45677777654
No 189
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.28 E-value=1.5 Score=25.52 Aligned_cols=31 Identities=19% Similarity=0.173 Sum_probs=19.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVC 76 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVC 76 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C 43 (44)
T 2yu5_A 12 PFKCSKCDRVFTQRNYLVQHERT-HAR-KSGPSS 43 (44)
T ss_dssp SEECSSSSCEESSSHHHHHHHHH-CCC-CCSSCC
T ss_pred CeECCCCCchhCCHHHHHHHhHh-cCC-CCCCCC
Confidence 4788888886 455677778765 432 234444
No 190
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=79.19 E-value=1.1 Score=28.27 Aligned_cols=25 Identities=24% Similarity=0.638 Sum_probs=21.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHP 68 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~ 68 (200)
.|.|++|++. -....|..|+...|.
T Consensus 40 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 40 VYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred CeECCCCCCccCCHHHHHHHHHHHcC
Confidence 5999999997 567889999998874
No 191
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=79.17 E-value=1.8 Score=25.25 Aligned_cols=32 Identities=13% Similarity=-0.059 Sum_probs=20.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCP 77 (200)
.|.|+.|++. -....|..|+... .. .++-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~H-~~-~k~~~C~ 44 (44)
T 2eou_A 12 TSECQECGKIFRHSSLLIEHQALH-AG-ESGPSSG 44 (44)
T ss_dssp CCCCTTTCCCCSSHHHHHHHHHHH-TT-SCCCCCC
T ss_pred CeECCCCCcccCCHHHHHHHHHHH-CC-CCCCCCC
Confidence 4889999886 4566788887653 22 3444553
No 192
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=78.99 E-value=1.3 Score=25.70 Aligned_cols=32 Identities=16% Similarity=0.130 Sum_probs=20.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCP 77 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCP 77 (200)
.|.|+.|++. -....|..|+.. |.. .+.-.|+
T Consensus 12 ~~~C~~C~k~f~~~~~L~~H~~~-H~~-~~~~~C~ 44 (44)
T 2eoj_A 12 PYECCECGKVFSRKDQLVSHQKT-HSG-QSGPSSG 44 (44)
T ss_dssp SCEETTTTEECSSHHHHHHHHTT-SSS-SCSCCCC
T ss_pred CeeCCCCCCccCCHHHHHHHHHH-cCC-CCCCCCC
Confidence 4888888886 456777888765 433 3444554
No 193
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=78.98 E-value=0.79 Score=32.29 Aligned_cols=43 Identities=28% Similarity=0.570 Sum_probs=26.5
Q ss_pred cceecCCCCcccccHH---HH---Hhh-----hhhcCCCCCCcccccccccccch
Q 028989 42 NAMFLCPFCAEDFDIV---GL---CCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~---~L---c~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
..++.||.|-+.++.. .+ |-| |-.... +..+..||+|...+..
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~CGH~fC~~Cl~~~~-~~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIR-TDENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSSTTSCCCCHHHHHHHT-TSSCSBCTTTCCBCSS
T ss_pred ccCCcCCccCccCccccccccccCCCCCcCHHHHHHHH-hcCCCCCCCCCCccCC
Confidence 4467899999977543 11 333 332222 2246789999998764
No 194
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=78.93 E-value=0.3 Score=32.97 Aligned_cols=47 Identities=23% Similarity=0.458 Sum_probs=26.5
Q ss_pred CCccceecCCCCcccccHHH-H-Hhhh-----hhcCCC----CCCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAEDFDIVG-L-CCHI-----DEDHPI----EAKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~-L-c~H~-----~~eH~~----e~k~vVCPICa~~v~~ 85 (200)
++....+.||.|.+.+.... | |-|. -..+-. ......||+|...+..
T Consensus 14 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 14 VNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCCCCCTTTCSCCSSCBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred HHccCCCCCCCCCcccCCceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 45566789999998654321 1 2231 111110 1235689999888764
No 195
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=78.92 E-value=1.4 Score=22.70 Aligned_cols=22 Identities=18% Similarity=0.543 Sum_probs=17.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 3 ~~~C~~C~~~f~~~~~l~~H~~~ 25 (30)
T 2m0d_A 3 PYQCDYCGRSFSDPTSKMRHLET 25 (30)
T ss_dssp CEECTTTCCEESCHHHHHHHHHT
T ss_pred CccCCCCCcccCCHHHHHHHHHH
Confidence 4889999987 456778888765
No 196
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.55 E-value=1.8 Score=28.29 Aligned_cols=29 Identities=24% Similarity=0.469 Sum_probs=24.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAK 72 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k 72 (200)
.|.|++|++. -....|..|+...|..+..
T Consensus 38 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 67 (78)
T 2d9h_A 38 RFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67 (78)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred ccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence 5999999997 5678999999999987653
No 197
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=78.43 E-value=1.1 Score=23.20 Aligned_cols=21 Identities=33% Similarity=0.542 Sum_probs=15.0
Q ss_pred ecCCCCccc-ccHHHHHhhhhh
Q 028989 45 FLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 45 F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
|.|+.|++. -....|..|+..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 1rik_A 3 FACPECPKRFMRSDHLTLHILL 24 (29)
T ss_dssp EECSSSSCEESCSHHHHHHHTG
T ss_pred ccCCCCCchhCCHHHHHHHHHH
Confidence 778888886 455677777754
No 198
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=78.24 E-value=1.5 Score=23.82 Aligned_cols=23 Identities=26% Similarity=0.615 Sum_probs=18.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDED 66 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~e 66 (200)
.|.|+.|++. .....|..|+...
T Consensus 7 ~~~C~~C~k~f~~~~~L~~H~~~h 30 (35)
T 2elx_A 7 GYVCALCLKKFVSSIRLRSHIREV 30 (35)
T ss_dssp SEECSSSCCEESSHHHHHHHHHHT
T ss_pred CeECCCCcchhCCHHHHHHHHHHH
Confidence 4899999997 5667888888754
No 199
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=77.72 E-value=1.4 Score=22.56 Aligned_cols=22 Identities=18% Similarity=0.247 Sum_probs=15.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. .....|..|+..
T Consensus 2 ~~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2m0f_A 2 PLKCRECGKQFTTSGNLKRHLRI 24 (29)
T ss_dssp CEECTTTSCEESCHHHHHHHHHH
T ss_pred CccCCCCCCccCChhHHHHHHHH
Confidence 3788888886 456677777654
No 200
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=77.60 E-value=1.6 Score=26.50 Aligned_cols=29 Identities=24% Similarity=0.514 Sum_probs=15.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAK 72 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k 72 (200)
-|.|+.|++. .....|..|+...|..+..
T Consensus 7 p~~C~~C~k~F~~~~~L~~H~~~~H~~e~~ 36 (48)
T 3iuf_A 7 PYACDICGKRYKNRPGLSYHYAHSHLAEEE 36 (48)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred CEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence 3667777765 4455666666644554443
No 201
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=77.54 E-value=1 Score=25.12 Aligned_cols=22 Identities=32% Similarity=0.496 Sum_probs=17.6
Q ss_pred eecCCCCcccccH--HHHHhhhhh
Q 028989 44 MFLCPFCAEDFDI--VGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~fD~--~~Lc~H~~~ 65 (200)
.|.|+.|++.|.. ..|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCPYCDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECSSSSCEECSSCHHHHHHHHH
T ss_pred CeECCCCChhhccCHHHHHHHHHh
Confidence 5999999998655 588888764
No 202
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=77.52 E-value=1.8 Score=23.96 Aligned_cols=22 Identities=27% Similarity=0.425 Sum_probs=17.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|...
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (37)
T 1p7a_A 11 PFQCPDCDRSFSRSDHLALHRKR 33 (37)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHGG
T ss_pred CccCCCCCcccCcHHHHHHHHHH
Confidence 4999999997 556788888765
No 203
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.76 E-value=2.5 Score=24.05 Aligned_cols=22 Identities=18% Similarity=0.304 Sum_probs=16.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 10 ~~~C~~C~k~f~~~~~L~~H~~~ 32 (41)
T 2ept_A 10 VYECQECGKSFRQKGSLTLHERI 32 (41)
T ss_dssp CEECSSSCCEESSHHHHHHHGGG
T ss_pred CeECCCCCCCcCCHHHHHHHHHH
Confidence 4888888886 456677788764
No 204
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=76.62 E-value=2.3 Score=24.22 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=14.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2ytb_A 11 PYRCDQCGKAFSQKGSLIVHIRV 33 (42)
T ss_dssp SBCCTTTTCCBSSHHHHHTTGGG
T ss_pred CeeCCCccchhCCHHHHHHHHHH
Confidence 4778888876 455667777654
No 205
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=76.62 E-value=1.3 Score=29.01 Aligned_cols=47 Identities=15% Similarity=0.306 Sum_probs=27.8
Q ss_pred CCccceecCCCCcccccHHH--HHhh-----hhhcCCCCCCcccccccccccchh
Q 028989 39 DDLNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIEAKNGVCPVCAKRVGTD 86 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~--Lc~H-----~~~eH~~e~k~vVCPICa~~v~~d 86 (200)
++....+.||.|.+.+.... -|-| |-...- ...+..||+|...+..+
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 10 KTVEDKYKCEKCHLVLCSPKQTECGHRFCESCMAALL-SSSSPKCTACQESIVKD 63 (66)
T ss_dssp CSCCCCEECTTTCCEESSCCCCSSSCCCCHHHHHHHH-TTSSCCCTTTCCCCCTT
T ss_pred hcCCcCCCCCCCChHhcCeeECCCCCHHHHHHHHHHH-HhCcCCCCCCCcCCChh
Confidence 34566899999988644321 2222 222221 13456899999887653
No 206
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=76.08 E-value=2 Score=23.41 Aligned_cols=23 Identities=17% Similarity=0.421 Sum_probs=18.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDED 66 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~e 66 (200)
.|.|+.|++. .....|..|+...
T Consensus 7 ~~~C~~C~k~f~~~~~l~~H~~~H 30 (35)
T 1srk_A 7 PFVCRICLSAFTTKANCARHLKVH 30 (35)
T ss_dssp CEECSSSCCEESSHHHHHHHHGGG
T ss_pred CeeCCCCCcccCCHHHHHHHHHHc
Confidence 5899999997 4667888887653
No 207
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.80 E-value=1.9 Score=23.84 Aligned_cols=22 Identities=23% Similarity=0.490 Sum_probs=17.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. .....|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elq_A 9 PFKCSLCEYATRSKSNLKAHMNR 31 (36)
T ss_dssp SEECSSSSCEESCHHHHHHHHHH
T ss_pred CccCCCCCchhCCHHHHHHHHHH
Confidence 5999999997 466788889765
No 208
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.76 E-value=2.1 Score=24.14 Aligned_cols=25 Identities=20% Similarity=0.445 Sum_probs=19.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHP 68 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~ 68 (200)
.|.|+.|++. -....|..|+...|.
T Consensus 9 ~~~C~~C~k~f~~~~~L~~H~~~~H~ 34 (37)
T 2elm_A 9 LYYCSQCHYSSITKNCLKRHVIQKHS 34 (37)
T ss_dssp EEECSSSSCEEECHHHHHHHHHHHTC
T ss_pred CeECCCCCcccCCHHHHHHHHHHHcc
Confidence 5999999997 567788899545554
No 209
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.61 E-value=1.8 Score=23.71 Aligned_cols=22 Identities=23% Similarity=0.462 Sum_probs=17.5
Q ss_pred eecCCCCcccc-cHHHHHhhhhh
Q 028989 44 MFLCPFCAEDF-DIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~f-D~~~Lc~H~~~ 65 (200)
.|.|+.|++.| ....|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elt_A 9 PYKCPQCSYASAIKANLNVHLRK 31 (36)
T ss_dssp SEECSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCCCCcccCCHHHHHHHHHH
Confidence 59999999974 56778888764
No 210
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.60 E-value=2.5 Score=28.11 Aligned_cols=46 Identities=17% Similarity=0.367 Sum_probs=28.3
Q ss_pred ccceecCCCCcccccHH-HH-Hhh-----hhhcCCCCCCcccccccccccchhhh
Q 028989 41 LNAMFLCPFCAEDFDIV-GL-CCH-----IDEDHPIEAKNGVCPVCAKRVGTDIV 88 (200)
Q Consensus 41 ~r~~F~CPfC~e~fD~~-~L-c~H-----~~~eH~~e~k~vVCPICa~~v~~d~v 88 (200)
....+.||.|.+.+... .| |-| |....- .+...||+|...+..+.+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~~~~ 64 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHPVSLPCKHVFCYLCVKGAS--WLGKRCALCRQEIPEDFL 64 (71)
T ss_dssp SSSCCBCSSSSSBCSSEEEETTTEEEEHHHHHHCT--TCSSBCSSSCCBCCHHHH
T ss_pred CCCCCCCccCCcccCCCEEccCCCHHHHHHHHHHH--HCCCcCcCcCchhCHhhc
Confidence 34567899999864432 22 444 333322 233689999999887654
No 211
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=75.35 E-value=1.9 Score=22.18 Aligned_cols=22 Identities=14% Similarity=0.244 Sum_probs=15.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|...
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCSVCGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECSSSCCEESCHHHHHHHHTT
T ss_pred CccCCCCCcccCCHHHHHHHHHh
Confidence 4788999886 445677777654
No 212
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=75.21 E-value=3.8 Score=26.80 Aligned_cols=48 Identities=17% Similarity=0.414 Sum_probs=24.5
Q ss_pred CCccceecCCCCcccccH----H-HHHhhhhhcCCCC---CCcccccccccccchh
Q 028989 39 DDLNAMFLCPFCAEDFDI----V-GLCCHIDEDHPIE---AKNGVCPVCAKRVGTD 86 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~----~-~Lc~H~~~eH~~e---~k~vVCPICa~~v~~d 86 (200)
++......||.|.+.|+. . .-|.|+-=.++.. .++..||+|...+...
T Consensus 9 ~~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 9 TEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQ 64 (69)
T ss_dssp CSTTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSC
T ss_pred CcCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCc
Confidence 344556789999876532 1 1133421100110 1134699998876543
No 213
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.98 E-value=1.4 Score=24.48 Aligned_cols=24 Identities=25% Similarity=0.589 Sum_probs=18.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDH 67 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH 67 (200)
.|.|+.|++. .....|..|+...+
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~h~ 33 (37)
T 2elo_A 9 SYSCPVCEKSFSEDRLIKSHIKTNH 33 (37)
T ss_dssp CCEETTTTEECSSHHHHHHHHHHHC
T ss_pred CcCCCCCCCccCCHHHHHHHHHHHc
Confidence 4899999997 56678888987643
No 214
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=74.39 E-value=1.1 Score=26.32 Aligned_cols=22 Identities=23% Similarity=0.333 Sum_probs=14.2
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. .....|..|+..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKECGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSSSCCEESSSHHHHHHHHH
T ss_pred CeeCcccChhhCCHHHHHHHHHH
Confidence 3777777775 345666677654
No 215
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.26 E-value=0.62 Score=31.25 Aligned_cols=45 Identities=24% Similarity=0.482 Sum_probs=27.8
Q ss_pred CCccceecCCCCccccc-HHHH--Hhh-----hhhcCCCCCCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAEDFD-IVGL--CCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD-~~~L--c~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
++....+.||.|.+.+. ...| |-| |...+- .....||+|...+..
T Consensus 10 ~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~~~~ 62 (72)
T 2djb_A 10 SELTPYILCSICKGYLIDATTITECLHTFCKSCIVRHF--YYSNRCPKCNIVVHQ 62 (72)
T ss_dssp CCCCGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHH--HHCSSCTTTCCCCCS
T ss_pred hhcCCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHH--HcCCcCCCcCcccCc
Confidence 45677899999998754 3333 444 332221 113589999988664
No 216
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=74.22 E-value=1.4 Score=29.98 Aligned_cols=46 Identities=22% Similarity=0.427 Sum_probs=31.9
Q ss_pred eecCC-CCcccccHHHHHhhhhhcCCCCCCcccccccccccc-hhhhhhh
Q 028989 44 MFLCP-FCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG-TDIVSHI 91 (200)
Q Consensus 44 ~F~CP-fC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~-~d~v~Hl 91 (200)
.-.|| .|++.+-...|-.|+..+ -..+.+.|+-|...+. .++..|.
T Consensus 16 ~v~C~~~C~~~v~r~~l~~H~~~~--C~~r~v~C~~C~~~~~~~~l~~H~ 63 (76)
T 2yuc_A 16 VIPCPNRCPMKLSRRDLPAHLQHD--CPKRRLKCEFCGCDFSGEAYESHE 63 (76)
T ss_dssp CCBCTTCCSCBCCSSSSTTTTTTS--CTTSCCCCSSSCCCCCHHHHHHTT
T ss_pred ccCCCccccHHhhHhHHHhhCHhh--CCCcceECCCCCCccCHHHHHHHH
Confidence 45785 688887778888887654 2345678888887654 4666665
No 217
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=74.20 E-value=1.3 Score=31.38 Aligned_cols=30 Identities=17% Similarity=0.571 Sum_probs=22.9
Q ss_pred ccceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 41 LNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 41 ~r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
..-+|.|+-|+.+|++. +...+.||-|..+
T Consensus 25 ~~v~Y~C~~CG~~~e~~------------~~d~irCp~CG~R 54 (70)
T 1twf_L 25 ATLKYICAECSSKLSLS------------RTDAVRCKDCGHR 54 (70)
T ss_dssp CCCCEECSSSCCEECCC------------TTSTTCCSSSCCC
T ss_pred ceEEEECCCCCCcceeC------------CCCCccCCCCCce
Confidence 56789999999987753 2335689999865
No 218
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.14 E-value=1.9 Score=27.61 Aligned_cols=27 Identities=26% Similarity=0.391 Sum_probs=22.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIE 70 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e 70 (200)
.|.|++|++. -....|..|+...|...
T Consensus 37 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~ 64 (70)
T 1x5w_A 37 PFKCNYCSFDTKQPSNLSKHMKKFHGDM 64 (70)
T ss_dssp SEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred CEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence 4999999997 57789999999887643
No 219
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=73.98 E-value=1.6 Score=35.29 Aligned_cols=27 Identities=30% Similarity=0.789 Sum_probs=19.9
Q ss_pred cceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
...|.||-||--++. + -+.+||||...
T Consensus 136 ~~~~~C~~CG~i~~~-------------~-~p~~CP~Cg~~ 162 (170)
T 3pwf_A 136 KKVYICPICGYTAVD-------------E-APEYCPVCGAP 162 (170)
T ss_dssp SCEEECTTTCCEEES-------------C-CCSBCTTTCCB
T ss_pred CCeeEeCCCCCeeCC-------------C-CCCCCCCCCCC
Confidence 468999999986651 1 23499999864
No 220
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=73.74 E-value=1.9 Score=22.01 Aligned_cols=19 Identities=32% Similarity=0.847 Sum_probs=8.3
Q ss_pred ecCCCCcccc-cHHHHHhhh
Q 028989 45 FLCPFCAEDF-DIVGLCCHI 63 (200)
Q Consensus 45 F~CPfC~e~f-D~~~Lc~H~ 63 (200)
|.|+.|++.| ....|..|.
T Consensus 3 ~~C~~C~~~f~~~~~l~~H~ 22 (29)
T 2m0e_A 3 HKCPHCDKKFNQVGNLKAHL 22 (29)
T ss_dssp CCCSSCCCCCCTTTHHHHHH
T ss_pred CcCCCCCcccCCHHHHHHHH
Confidence 4455555542 233344443
No 221
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=73.69 E-value=1.7 Score=22.62 Aligned_cols=22 Identities=18% Similarity=0.620 Sum_probs=16.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 3 PYRCPLCRAGCPSLASMQAHMRG 25 (27)
T ss_dssp TEEETTTTEEESCHHHHHHHHTT
T ss_pred CcCCCCCCcccCCHHHHHHHHHh
Confidence 3789999986 456677788653
No 222
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=73.63 E-value=2 Score=26.12 Aligned_cols=25 Identities=16% Similarity=0.341 Sum_probs=20.3
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHP 68 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~ 68 (200)
.|.|++|+.. -....|..|+...|.
T Consensus 29 ~~~C~~C~~~f~~~~~l~~H~~~h~~ 54 (57)
T 1bbo_A 29 PYHCTYCNFSFKTKGNLTKHMKSKAH 54 (57)
T ss_dssp CEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred CccCCCCCchhcCHHHHHHHHHHhcc
Confidence 5999999997 577889999876543
No 223
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=73.62 E-value=3.2 Score=23.57 Aligned_cols=22 Identities=23% Similarity=0.449 Sum_probs=15.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 11 ~~~C~~C~k~f~~~~~l~~H~~~ 33 (42)
T 2epc_A 11 PYLCGQCGKSFTQRGSLAVHQRS 33 (42)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHhhh
Confidence 4788888886 456777778654
No 224
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.28 E-value=0.81 Score=29.73 Aligned_cols=43 Identities=23% Similarity=0.691 Sum_probs=24.7
Q ss_pred CccceecCCCCcccccHH---------HHHhhh-----hhcCCCCCCcccccccccccc
Q 028989 40 DLNAMFLCPFCAEDFDIV---------GLCCHI-----DEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~---------~Lc~H~-----~~eH~~e~k~vVCPICa~~v~ 84 (200)
.....+.||.|.+.+... .-|-|. ....- .+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 11 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKIN 67 (69)
T ss_dssp CTTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHH--HHCSSCTTTCCCCC
T ss_pred CCCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHH--HcCCCCCCCCCccC
Confidence 345578899999876653 113332 21111 01357999987654
No 225
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.03 E-value=2.4 Score=23.14 Aligned_cols=22 Identities=27% Similarity=0.437 Sum_probs=17.6
Q ss_pred eecCCCCcccc-cHHHHHhhhhh
Q 028989 44 MFLCPFCAEDF-DIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~f-D~~~Lc~H~~~ 65 (200)
.|.|+.|++.| ....|..|...
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elr_A 9 THLCDMCGKKFKSKGTLKSHKLL 31 (36)
T ss_dssp SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred CeecCcCCCCcCchHHHHHHHHH
Confidence 58999999975 56778888765
No 226
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=72.47 E-value=1.3 Score=38.83 Aligned_cols=44 Identities=18% Similarity=0.348 Sum_probs=26.2
Q ss_pred ccceecCCCCcccccHHH---HHhh-----hhhcCCCCCCcccccc--cccccc
Q 028989 41 LNAMFLCPFCAEDFDIVG---LCCH-----IDEDHPIEAKNGVCPV--CAKRVG 84 (200)
Q Consensus 41 ~r~~F~CPfC~e~fD~~~---Lc~H-----~~~eH~~e~k~vVCPI--Ca~~v~ 84 (200)
...+|.||.|.+.|.... -|-| +-..+-.+.....||| |...+.
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~ 231 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVS 231 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEEC
T ss_pred CceeeECcCccCcccCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCc
Confidence 367899999987533222 1333 2222322334578999 999765
No 227
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=74.74 E-value=0.76 Score=23.99 Aligned_cols=22 Identities=27% Similarity=0.572 Sum_probs=15.4
Q ss_pred eecCCCCcccc-cHHHHHhhhhh
Q 028989 44 MFLCPFCAEDF-DIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~f-D~~~Lc~H~~~ 65 (200)
.|.|+.|++.| ....|..|+..
T Consensus 3 ~~~C~~C~k~f~~~~~l~~H~~~ 25 (30)
T 2lvr_A 3 PYVCIHCQRQFADPGALQRHVRI 25 (30)
Confidence 47889998874 45667777654
No 228
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=71.50 E-value=0.57 Score=31.77 Aligned_cols=45 Identities=22% Similarity=0.544 Sum_probs=25.5
Q ss_pred CCCccceecCCCCcccccHH-HH--Hhhh-----hhcCCCCCCcccccccccc
Q 028989 38 DDDLNAMFLCPFCAEDFDIV-GL--CCHI-----DEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 38 d~d~r~~F~CPfC~e~fD~~-~L--c~H~-----~~eH~~e~k~vVCPICa~~ 82 (200)
.++....+.||.|.+.|... .| |-|. -..+-.......||+|...
T Consensus 9 ~~~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~ 61 (74)
T 2yur_A 9 DDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDEHTCPTCHQN 61 (74)
T ss_dssp CCCSCGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCS
T ss_pred cccCCCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCc
Confidence 34567789999998864432 22 3332 2221111223579999886
No 229
>1wii_A Hypothetical UPF0222 protein MGC4549; domain of unknown function, zinc finger, metal-binding protein, structural genomics; NMR {Mus musculus} SCOP: g.41.3.4
Probab=71.26 E-value=1.2 Score=32.81 Aligned_cols=35 Identities=31% Similarity=0.751 Sum_probs=22.3
Q ss_pred ccceecCCCCccc--ccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 41 LNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 41 ~r~~F~CPfC~e~--fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
+...|.||||+-+ +.+ .-......-.+.|-||...
T Consensus 20 L~t~F~CPfCnh~~sV~v-------kidk~~~~g~l~C~~Cg~~ 56 (85)
T 1wii_A 20 LETQFTCPFCNHEKSCDV-------KMDRARNTGVISCTVCLEE 56 (85)
T ss_dssp CSSCCCCTTTCCSSCEEE-------EEETTTTEEEEEESSSCCE
T ss_pred CCCeEcCCCCCCCCeEEE-------EEEccCCEEEEEcccCCCe
Confidence 4568999999864 322 2222223344679999986
No 230
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=70.78 E-value=4.2 Score=32.95 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=27.1
Q ss_pred CCccceecCCCCccc------------ccHHHHHhhhhhcCCCCCCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAED------------FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~------------fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
.+.+..|.||.|.+- |+...+..|+... ...||+|...+..
T Consensus 203 ~~~~~~~~c~i~~~~~~dPv~~~~gh~f~~~~i~~~~~~~------~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 203 RDIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRV------GHFNPVTRSPLTQ 255 (281)
T ss_dssp CCCCSTTBCTTTCSBCSSEEECSSCCEEETTHHHHHHHHT------CSSCTTTCCCCCG
T ss_pred CCCCcccCCcCcCCHhcCCeECCCCCEECHHHHHHHHHHC------CCCCcCCCCCCch
Confidence 466788999998763 3344555555542 2249999998653
No 231
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=70.73 E-value=2.8 Score=23.09 Aligned_cols=21 Identities=33% Similarity=0.594 Sum_probs=14.6
Q ss_pred ecCCCCccc-ccHHHHHhhhhh
Q 028989 45 FLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 45 F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
|.|+.|++. -....|..|+..
T Consensus 3 ~~C~~C~k~F~~~~~L~~H~~~ 24 (33)
T 1rim_A 3 FACPECPKRFMRSDHLSKHITL 24 (33)
T ss_dssp CCCSSSCCCCSSHHHHHHHHHH
T ss_pred ccCCCCCchhCCHHHHHHHHHH
Confidence 678888876 456677777654
No 232
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=70.69 E-value=1.2 Score=34.88 Aligned_cols=29 Identities=31% Similarity=0.830 Sum_probs=22.2
Q ss_pred cceecCCCCcccccHHHHHhhhhhcCCCCCCccccccccccc
Q 028989 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRV 83 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v 83 (200)
.-.|.|+-|++.|+.. .....||.|...+
T Consensus 130 ~~~y~C~~Cg~~~~~~-------------~~~~~Cp~CG~~~ 158 (165)
T 2lcq_A 130 KWRYVCIGCGRKFSTL-------------PPGGVCPDCGSKV 158 (165)
T ss_dssp CCCEEESSSCCEESSC-------------CGGGBCTTTCCBE
T ss_pred cEEEECCCCCCcccCC-------------CCCCcCCCCCCcc
Confidence 4579999999988744 3346999998764
No 233
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=70.63 E-value=2.1 Score=27.00 Aligned_cols=24 Identities=33% Similarity=0.655 Sum_probs=21.3
Q ss_pred cCCCCccc-ccHHHHHhhhhhcCCC
Q 028989 46 LCPFCAED-FDIVGLCCHIDEDHPI 69 (200)
Q Consensus 46 ~CPfC~e~-fD~~~Lc~H~~~eH~~ 69 (200)
-|-||-+. -|+..|..|+.+.|-.
T Consensus 11 hcrfckkkysdvknlikhire~hd~ 35 (37)
T 2elu_A 11 HCRFCKKKYSDVKNLIKHIRDAHDP 35 (37)
T ss_dssp EETTTTEECSSHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 69999984 8999999999999864
No 234
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=70.27 E-value=1.5 Score=28.25 Aligned_cols=42 Identities=21% Similarity=0.418 Sum_probs=27.1
Q ss_pred ceecCCCCcccccHHH--HHhhhhhcCCCCCCcccccccccccc
Q 028989 43 AMFLCPFCAEDFDIVG--LCCHIDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 43 ~~F~CPfC~e~fD~~~--Lc~H~~~eH~~e~k~vVCPICa~~v~ 84 (200)
..+.||.|.+.|.... =|-|.-=..+.......||+|...+.
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLCSGCLEASGMQCPICQAPWP 48 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSBTTTCSSSSSSCSSCCSSSS
T ss_pred cCCCceEeCCccCCeEEcCCCCcccHHHHccCCCCCCcCCcEee
Confidence 4578999998654332 24454334455556678999988765
No 235
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.20 E-value=3.9 Score=23.33 Aligned_cols=22 Identities=18% Similarity=0.433 Sum_probs=14.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2eos_A 11 PYPCEICGTRFRHLQTLKSHLRI 33 (42)
T ss_dssp CBCCSSSCCCBSSHHHHHHHTTT
T ss_pred CEECCCCCCccCCHHHHHHHHHh
Confidence 4778888876 445667777654
No 236
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=69.05 E-value=0.43 Score=35.39 Aligned_cols=44 Identities=25% Similarity=0.400 Sum_probs=26.2
Q ss_pred ccceecCCCCcccccHHH--HHhh-----hhhcCCCCCCcccccccccccch
Q 028989 41 LNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 41 ~r~~F~CPfC~e~fD~~~--Lc~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
....+.||.|.+.|.... -|-| |-..+-. .+...||+|...++.
T Consensus 49 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 49 VEETFQCICCQELVFRPITTVCQHNVCKDCLDRSFR-AQVFSCPACRYDLGR 99 (124)
T ss_dssp HHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCCT
T ss_pred CccCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHh-HCcCCCCCCCccCCC
Confidence 355789999988654322 1222 3333221 344589999988764
No 237
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=71.60 E-value=1 Score=23.52 Aligned_cols=21 Identities=24% Similarity=0.670 Sum_probs=14.2
Q ss_pred ecCCCCcccc-cHHHHHhhhhh
Q 028989 45 FLCPFCAEDF-DIVGLCCHIDE 65 (200)
Q Consensus 45 F~CPfC~e~f-D~~~Lc~H~~~ 65 (200)
|.|+.|++.| ....|..|+..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (29)
T 2lvt_A 3 CQCVMCGKAFTQASSLIAHVRQ 24 (29)
Confidence 6788888864 45666677653
No 238
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=71.33 E-value=1.1 Score=23.02 Aligned_cols=21 Identities=29% Similarity=0.706 Sum_probs=14.0
Q ss_pred ecCCCCcccc-cHHHHHhhhhh
Q 028989 45 FLCPFCAEDF-DIVGLCCHIDE 65 (200)
Q Consensus 45 F~CPfC~e~f-D~~~Lc~H~~~ 65 (200)
|.|+.|++.| ....|..|+..
T Consensus 3 ~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 3 YVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 7788888864 34666666543
No 239
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=68.13 E-value=2.9 Score=30.24 Aligned_cols=45 Identities=24% Similarity=0.399 Sum_probs=27.9
Q ss_pred CccceecCCCCcccccHHH--HHhh-----hhhcCCCCCCcccccccccccch
Q 028989 40 DLNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~~--Lc~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
.....+.||.|.+.+.... -|-| |-...- ......||+|...+..
T Consensus 11 ~~~~~~~C~iC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 11 PSLSECQCGICMEILVEPVTLPCNHTLCKPCFQSTV-EKASLCCPFCRRRVSS 62 (115)
T ss_dssp CCHHHHBCTTTCSBCSSCEECTTSCEECHHHHCCCC-CTTTSBCTTTCCBCHH
T ss_pred CCCCCCCCccCCcccCceeEcCCCCHHhHHHHHHHH-hHCcCCCCCCCcccCc
Confidence 4456789999998644321 2333 433333 2335789999998764
No 240
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.99 E-value=2.5 Score=30.83 Aligned_cols=38 Identities=21% Similarity=0.179 Sum_probs=29.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
.|.|+.|++. -....|..|+...|..+ ++-.|.||...
T Consensus 50 pf~C~~Cgk~F~~~~~L~~H~~r~Htge-kpy~C~~~~~~ 88 (102)
T 2ghf_A 50 SYVCVECNFLTKRYDALSEHNLKYHPGE-ENFKLTMVKRN 88 (102)
T ss_dssp CEEETTTTEEESSTHHHHTHHHHTSTTC-CCEEEEECCCS
T ss_pred CcCCCCCCcccCCHHHHHHHHHHhcCCC-CCeeCCcccCC
Confidence 5999999997 56788999966667654 67899986653
No 241
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.74 E-value=3.6 Score=22.60 Aligned_cols=22 Identities=14% Similarity=0.316 Sum_probs=17.4
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 9 ~~~C~~C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHICERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSSSCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCccCCHHHHHHHHHH
Confidence 5999999997 556778888764
No 242
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=67.67 E-value=3.1 Score=26.80 Aligned_cols=24 Identities=21% Similarity=0.307 Sum_probs=19.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDH 67 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH 67 (200)
.|.|++|++. -....|..|+...+
T Consensus 42 ~~~C~~C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 42 PYKCLECGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred CeECCCCCcccCCHHHHHHHHHhcC
Confidence 5999999997 56788999987644
No 243
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=67.53 E-value=3.6 Score=23.19 Aligned_cols=22 Identities=23% Similarity=0.604 Sum_probs=17.5
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. .....|..|+..
T Consensus 6 ~~~C~~C~k~f~~~~~L~~H~~~ 28 (39)
T 1njq_A 6 SYTCSFCKREFRSAQALGGHMNV 28 (39)
T ss_dssp SEECTTTCCEESSHHHHHHHHHT
T ss_pred ceECCCCCcccCCHHHHHHHHHH
Confidence 4899999997 566778888765
No 244
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=66.96 E-value=4.2 Score=23.62 Aligned_cols=23 Identities=17% Similarity=0.205 Sum_probs=18.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDED 66 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~e 66 (200)
.|.|+.|++. -....|..|+...
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~H 35 (44)
T 2epv_A 12 PYECNECGKAFIWKSLLIVHERTH 35 (44)
T ss_dssp SEECSSSCCEESSHHHHHHHHGGG
T ss_pred CeECCCCCcccCchHHHHHHHhHh
Confidence 5999999997 5678889998753
No 245
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=66.66 E-value=1.4 Score=35.94 Aligned_cols=28 Identities=21% Similarity=0.535 Sum_probs=20.0
Q ss_pred cceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
...|.|+.||--+|-. + -+-+||+|...
T Consensus 153 ~~~~~C~~CG~~~~g~--------~-----~p~~CP~C~~~ 180 (191)
T 1lko_A 153 ATKWRCRNCGYVHEGT--------G-----APELCPACAHP 180 (191)
T ss_dssp EEEEEETTTCCEEEEE--------E-----CCSBCTTTCCB
T ss_pred CceEEECCCCCEeeCC--------C-----CCCCCCCCcCC
Confidence 3489999999877621 1 22399999884
No 246
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.64 E-value=5.3 Score=25.89 Aligned_cols=23 Identities=17% Similarity=0.297 Sum_probs=19.3
Q ss_pred eecCCCCccc-ccHHHHHhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDED 66 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~e 66 (200)
.|.|++|++. -....|..|+...
T Consensus 46 ~~~C~~C~~~f~~~~~L~~H~~~H 69 (77)
T 2cot_A 46 PYKCDECGKAFIQRSHLIGHHRVH 69 (77)
T ss_dssp SEECSSSCCEESSHHHHHHHGGGS
T ss_pred CeeCCCCCCccCCHHHHHHHHHHh
Confidence 5999999997 5778899999754
No 247
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.84 E-value=3.8 Score=23.30 Aligned_cols=22 Identities=18% Similarity=0.434 Sum_probs=14.9
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 11 ~~~C~~C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 11 PYKCETCGARFVQVAHLRAHVLI 33 (42)
T ss_dssp SEECTTTCCEESSHHHHHHHTHH
T ss_pred CEeCCCcChhhCCHHHHHHHHHH
Confidence 4778888876 455667777653
No 248
>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}
Probab=63.36 E-value=3.6 Score=26.17 Aligned_cols=24 Identities=17% Similarity=0.286 Sum_probs=18.7
Q ss_pred cceecCCCCcccccHHHHHhhhhh
Q 028989 42 NAMFLCPFCAEDFDIVGLCCHIDE 65 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~~Lc~H~~~ 65 (200)
...|.||-|++.|.+....+|.+-
T Consensus 7 ~~~~~C~~C~~~i~~~~~~EH~D~ 30 (39)
T 2i5o_A 7 EDQVPCEKCGSLVPVWDMPEHMDY 30 (39)
T ss_dssp CCEEECTTTCCEEEGGGHHHHHHH
T ss_pred CCCcccccccCcCCcccccchhhH
Confidence 346889999998888888888753
No 249
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=62.79 E-value=2.2 Score=31.94 Aligned_cols=12 Identities=50% Similarity=1.337 Sum_probs=10.5
Q ss_pred eecCCCCccccc
Q 028989 44 MFLCPFCAEDFD 55 (200)
Q Consensus 44 ~F~CPfC~e~fD 55 (200)
.|.||-|+|+|-
T Consensus 51 ~FkCP~CgEEFy 62 (95)
T 2k5c_A 51 VFKCPVCGEEFY 62 (95)
T ss_dssp EEECTTTCCEEE
T ss_pred hhcCCCccHHHh
Confidence 799999999863
No 250
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=62.72 E-value=2.5 Score=27.73 Aligned_cols=43 Identities=21% Similarity=0.460 Sum_probs=26.2
Q ss_pred CccceecCCCCcccccHHHH-Hhh-----hhhcCCCCCCcccccccccccc
Q 028989 40 DLNAMFLCPFCAEDFDIVGL-CCH-----IDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~~L-c~H-----~~~eH~~e~k~vVCPICa~~v~ 84 (200)
+....+.||.|.+.+....| |-| |....-. +...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~CgH~fc~~Ci~~~~~--~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 11 QLTDEEECCICMDGRADLILPCAHSFCQKCIDKWSD--RHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCCCCSSSCCSCCSEEETTTEEECHHHHHHSSC--CCSSCHHHHHCTT
T ss_pred cCCCCCCCeeCCcCccCcccCCCCcccHHHHHHHHH--CcCcCCCcCCccc
Confidence 44557899999986433222 333 3333222 4678999987655
No 251
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.13 E-value=3.9 Score=28.28 Aligned_cols=26 Identities=23% Similarity=0.483 Sum_probs=22.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPI 69 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~ 69 (200)
.|.|++|++. -....|..|+...|..
T Consensus 54 ~~~C~~C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 54 ALKCQHCRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHSCSSSCCCCSCHHHHHHHHHHHSCS
T ss_pred CEECCCCCCccCCHHHHHHHHHHHcCC
Confidence 6999999997 5678899999888753
No 252
>1ffk_W Ribosomal protein L37AE; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1jj2_Y 1k73_1* 1k8a_1* 1k9m_1* 1kc8_1* 1kd1_1* 1kqs_Y* 1m1k_1* 1m90_1* 1n8r_1* 1nji_1* 1q7y_1* 1q81_1* 1q82_1* 1q86_1* 1qvf_Y 1qvg_Y 1w2b_Y 3cxc_Y*
Probab=61.88 E-value=1.7 Score=31.33 Aligned_cols=16 Identities=19% Similarity=0.544 Sum_probs=13.1
Q ss_pred CCCccceecCCCCccc
Q 028989 38 DDDLNAMFLCPFCAED 53 (200)
Q Consensus 38 d~d~r~~F~CPfC~e~ 53 (200)
+..+...|.||||+.+
T Consensus 21 e~~q~~ky~C~fCgk~ 36 (73)
T 1ffk_W 21 EIKHKKKYKCPVCGFP 36 (73)
T ss_pred HHhcccCccCCCCCCc
Confidence 3567889999999984
No 253
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=61.41 E-value=2 Score=31.36 Aligned_cols=32 Identities=25% Similarity=0.443 Sum_probs=23.0
Q ss_pred CccceecCCCCccc--ccHHHHHhhhhhcCCCCCCcccccccccccc
Q 028989 40 DLNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 40 d~r~~F~CPfC~e~--fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~ 84 (200)
.+...|+||||+.+ ++... ....||-|-..+.
T Consensus 23 ~q~~~y~Cp~CG~~~v~r~at-------------GiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 23 EMNEDHACPNCGEDRVDRQGT-------------GIWQCSYCDYKFT 56 (83)
T ss_dssp HHHSCEECSSSCCEEEEEEET-------------TEEEETTTCCEEE
T ss_pred hccccCcCCCCCCcceeccCC-------------CeEECCCCCCEec
Confidence 45668999999985 55432 3568999988743
No 254
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.38 E-value=2.2 Score=28.40 Aligned_cols=43 Identities=35% Similarity=0.571 Sum_probs=22.4
Q ss_pred CccceecCCCCcccccHHH-----HHhhh-----hhcCCCCCCcccccccccccc
Q 028989 40 DLNAMFLCPFCAEDFDIVG-----LCCHI-----DEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~~-----Lc~H~-----~~eH~~e~k~vVCPICa~~v~ 84 (200)
+......||.|.+.|.... -|.|. ....- .+...||+|...+.
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~--~~~~~CP~Cr~~~~ 63 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWL--EVRKVCPLCNMPVL 63 (74)
T ss_dssp CCCCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHH--HHCSBCTTTCCBCS
T ss_pred cCCCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHH--HcCCcCCCcCcccc
Confidence 3444568999988654211 13332 11111 11237999987654
No 255
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A
Probab=61.20 E-value=3.5 Score=33.96 Aligned_cols=28 Identities=29% Similarity=0.821 Sum_probs=20.8
Q ss_pred cceecCCCCcccccHHHHHhhhhhcCCCCCCccccccccccc
Q 028989 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRV 83 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v 83 (200)
...|.|+.||--+| + + .+-+||+|....
T Consensus 169 ~~~~~C~~CG~i~~--g-------~-----~p~~CP~C~~~k 196 (202)
T 1yuz_A 169 DKFHLCPICGYIHK--G-------E-----DFEKCPICFRPK 196 (202)
T ss_dssp CCEEECSSSCCEEE--S-------S-----CCSBCTTTCCBG
T ss_pred CcEEEECCCCCEEc--C-------c-----CCCCCCCCCCCh
Confidence 36899999998776 2 1 237999998753
No 256
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=61.16 E-value=0.59 Score=29.41 Aligned_cols=11 Identities=36% Similarity=1.044 Sum_probs=8.3
Q ss_pred ccccccccccc
Q 028989 73 NGVCPVCAKRV 83 (200)
Q Consensus 73 ~vVCPICa~~v 83 (200)
+..||+|...+
T Consensus 43 ~~~CP~Cr~~~ 53 (55)
T 1iym_A 43 HSTCPLCRLTV 53 (55)
T ss_dssp CCSCSSSCCCS
T ss_pred CCcCcCCCCEe
Confidence 45899998754
No 257
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=60.59 E-value=2.2 Score=30.71 Aligned_cols=15 Identities=27% Similarity=0.691 Sum_probs=12.3
Q ss_pred CCccceecCCCCccc
Q 028989 39 DDLNAMFLCPFCAED 53 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~ 53 (200)
..+.+.|.||||+..
T Consensus 21 ~~q~~ky~C~fCgk~ 35 (72)
T 3jyw_9 21 IQQHARYDCSFCGKK 35 (72)
T ss_dssp HHHHSCBCCSSCCSS
T ss_pred HHhccCccCCCCCCc
Confidence 456789999999985
No 258
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=60.53 E-value=1.4 Score=36.94 Aligned_cols=55 Identities=16% Similarity=0.357 Sum_probs=34.2
Q ss_pred cceecCCCCcccccHHHHHhhhhhcCC-CCCCcccccccccccch-hhhhhhhhhccchh
Q 028989 42 NAMFLCPFCAEDFDIVGLCCHIDEDHP-IEAKNGVCPVCAKRVGT-DIVSHITMQHGNFF 99 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~~Lc~H~~~eH~-~e~k~vVCPICa~~v~~-d~v~Hlt~qH~~~~ 99 (200)
+-+|.||.|+.++...++.. .... .++.-..||-|...++. -++..|+++-+...
T Consensus 20 ~l~l~Cp~C~~~~~F~gv~~---~~~~~~~~sg~~C~~C~~~~~~~~i~nQl~l~iR~~i 76 (206)
T 3flo_B 20 TLELSCPSCDKRFPFGGIVS---SNYYRVSYNGLQCKHCEQLFTPLQLTSQIEHSIRAHI 76 (206)
T ss_dssp CEEEECTTTCCEEEECSSSC---CSSEEEETTEEEETTTCCBCCHHHHHHHHHHHHHHHH
T ss_pred eeEEECCCCCCccCCCCccc---CCCcccccccccCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 45899999998766666642 1111 34455689999998653 44555554444433
No 259
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=60.50 E-value=4.1 Score=28.98 Aligned_cols=29 Identities=17% Similarity=0.430 Sum_probs=19.5
Q ss_pred ccccccccccc-----chhhhhhhhhhccchhhh
Q 028989 73 NGVCPVCAKRV-----GTDIVSHITMQHGNFFKI 101 (200)
Q Consensus 73 ~vVCPICa~~v-----~~d~v~Hlt~qH~~~~K~ 101 (200)
.++|.+|-..+ +.+|..||...|...++.
T Consensus 29 ~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~ 62 (73)
T 2ct5_A 29 KIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCE 62 (73)
T ss_dssp CCEETTTTEECCCCSSTHHHHHHHHHSCHHHHHH
T ss_pred EEECCCCCccccCCCChHhHHHHHHHHCHHHHHH
Confidence 34455554442 459999999889887753
No 260
>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1
Probab=60.44 E-value=3.4 Score=35.16 Aligned_cols=27 Identities=26% Similarity=0.468 Sum_probs=24.0
Q ss_pred CccceecCCCCcccccHHHHHhhhhhc
Q 028989 40 DLNAMFLCPFCAEDFDIVGLCCHIDED 66 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~~Lc~H~~~e 66 (200)
=.||-|.|-.|++.+|+..|..|+..+
T Consensus 150 vFWQFYKCe~CgKYvDId~~~~Hlk~H 176 (226)
T 2czr_A 150 IFWQFYKCEECGKYVDIENLEAHLREH 176 (226)
T ss_dssp EEEEEEECTTTCCEEEGGGHHHHHHTT
T ss_pred EEEEEEehhhcCceecHHHHHHHHHHc
Confidence 358999999999999999999998754
No 261
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=60.41 E-value=5.2 Score=24.40 Aligned_cols=23 Identities=22% Similarity=0.332 Sum_probs=18.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDED 66 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~e 66 (200)
.|.|+.|++. -....|..|+...
T Consensus 24 ~~~C~~C~k~f~~~~~L~~H~~~H 47 (54)
T 1yui_A 24 PATCPICYAVIRQSRNLRRHLELR 47 (54)
T ss_dssp CEECTTTCCEESSHHHHHHHHHHH
T ss_pred CccCCCCCcccCCHHHHHHHHHHh
Confidence 5999999997 5677888998753
No 262
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=60.10 E-value=2.2 Score=31.40 Aligned_cols=15 Identities=20% Similarity=0.720 Sum_probs=12.5
Q ss_pred CCccceecCCCCccc
Q 028989 39 DDLNAMFLCPFCAED 53 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~ 53 (200)
..+.+.|.||||+..
T Consensus 30 ~~q~~ky~CpfCGk~ 44 (83)
T 3j21_i 30 AKMRQKHTCPVCGRK 44 (83)
T ss_dssp HHHHSCBCCSSSCSS
T ss_pred HHhhcccCCCCCCCc
Confidence 456789999999985
No 263
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=59.85 E-value=2.2 Score=33.10 Aligned_cols=41 Identities=12% Similarity=0.109 Sum_probs=29.4
Q ss_pred ccceecCCCCccc--ccHHHHHhhhhhcCCCCCCcccccccccccchhhhhhh
Q 028989 41 LNAMFLCPFCAED--FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSHI 91 (200)
Q Consensus 41 ~r~~F~CPfC~e~--fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~~d~v~Hl 91 (200)
..-.++|| |+.. +....|-.. ..+.|+-|+..+-.-+..|-
T Consensus 109 ~~f~~~Cr-CG~~f~i~~~~l~~~---------~~v~C~sCSl~~~v~~~~~~ 151 (155)
T 2l6l_A 109 HSFYLSCR-CGGKYSVSKDEAEEV---------SLISCDTCSLIIELLHYNHH 151 (155)
T ss_dssp TEEEEECS-SSCEEEEETTHHHHC---------CEEECSSSSCEEEEECCCCC
T ss_pred cEEEEcCC-CCCeEEecHHHhCCC---------CEEECCCCceEEEEEEcccc
Confidence 34579999 9984 555555321 56889999999877777663
No 264
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=59.42 E-value=7.7 Score=26.33 Aligned_cols=23 Identities=22% Similarity=0.398 Sum_probs=15.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhc
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDED 66 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~e 66 (200)
-|.|+.|++. .....|..|....
T Consensus 13 py~C~~CgK~F~~~s~L~~H~r~H 36 (66)
T 2epp_A 13 ILPCGLCGKVFTDANRLRQHEAQH 36 (66)
T ss_dssp CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred CcCCCCCCCccCCHHHHHhhhhhh
Confidence 4778888876 4556677777663
No 265
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.33 E-value=4.6 Score=23.26 Aligned_cols=22 Identities=23% Similarity=0.360 Sum_probs=14.1
Q ss_pred eecCCCCccc-ccHHHHHhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+.|++. -....|..|+..
T Consensus 12 ~~~C~~C~k~F~~~~~L~~H~~~ 34 (44)
T 2eox_A 12 SYNCNECGKAFTRIFHLTRHQKI 34 (44)
T ss_dssp CEEETTTTEEESSSHHHHTTHHH
T ss_pred CeECcccCcccCCHHHHHHHHHH
Confidence 4777777775 455666667654
No 266
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=58.52 E-value=0.82 Score=32.42 Aligned_cols=44 Identities=25% Similarity=0.582 Sum_probs=27.2
Q ss_pred CccceecCCCCcccccHH-HH--Hhh-----hhhcCCCCCCcccccccccccch
Q 028989 40 DLNAMFLCPFCAEDFDIV-GL--CCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~-~L--c~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
+....+.||.|.+.+... .+ |-| |-..+-. +...||+|...++.
T Consensus 18 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 18 TIDDLLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLS--YKTQCPTCCVTVTE 69 (99)
T ss_dssp HHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHT--TCCBCTTTCCBCCG
T ss_pred hCCCCCCcccCChhhCCcCEECCCCCHhhHHHHHHHHH--CCCCCCCCCCcCCh
Confidence 345578999999875443 33 444 3322221 23689999998764
No 267
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=58.18 E-value=1.3 Score=28.25 Aligned_cols=40 Identities=28% Similarity=0.791 Sum_probs=22.8
Q ss_pred eecCCCCcccccHH---------HHHhhh-----hhcCCCCCCcccccccccccch
Q 028989 44 MFLCPFCAEDFDIV---------GLCCHI-----DEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 44 ~F~CPfC~e~fD~~---------~Lc~H~-----~~eH~~e~k~vVCPICa~~v~~ 85 (200)
.+.||.|.+.+... .-|-|. -...- .++..||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~~ 56 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKINH 56 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHH--HHCSBCTTTCCBCTT
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHH--HcCCCCCCCCccCCc
Confidence 46788888876543 123332 11111 124589999988765
No 268
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=58.17 E-value=0.95 Score=35.29 Aligned_cols=45 Identities=27% Similarity=0.473 Sum_probs=26.8
Q ss_pred ccceecCCCCcccccHHH--HHhh-----hhhcCCCCCCcccccccccccchh
Q 028989 41 LNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIEAKNGVCPVCAKRVGTD 86 (200)
Q Consensus 41 ~r~~F~CPfC~e~fD~~~--Lc~H-----~~~eH~~e~k~vVCPICa~~v~~d 86 (200)
....+.||.|.+.|.... -|-| |...+-. .....||+|...++.+
T Consensus 75 l~~~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 75 LEQSFMCVCCQELVYQPVTTECFHNVCKDCLQRSFK-AQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHHHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH-TTCCBCTTTCCBCCTT
T ss_pred CccCCEeecCChhhcCCEEcCCCCchhHHHHHHHHH-hCCCcCCCCCccCCCC
Confidence 456789999988644321 1222 3333221 2345899999987754
No 269
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=57.95 E-value=14 Score=26.94 Aligned_cols=47 Identities=19% Similarity=0.340 Sum_probs=26.7
Q ss_pred CCccceecCCCCcccccHHHH--Hhh-----hhhcCCCCCCcccccccccccchh
Q 028989 39 DDLNAMFLCPFCAEDFDIVGL--CCH-----IDEDHPIEAKNGVCPVCAKRVGTD 86 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~L--c~H-----~~~eH~~e~k~vVCPICa~~v~~d 86 (200)
+.....|.||.|.+.+..... |-| |-...- ..+...||+|...+..+
T Consensus 13 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~~ 66 (118)
T 3hct_A 13 PPLESKYECPICLMALREAVQTPCGHRFCKACIIKSI-RDAGHKCPVDNEILLEN 66 (118)
T ss_dssp SCCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHHH-HHHCSBCTTTCCBCCGG
T ss_pred cCCCCCCCCCcCChhhcCeEECCcCChhhHHHHHHHH-hhCCCCCCCCCCCcCHH
Confidence 456678999999986543211 333 111111 11123899999887653
No 270
>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}
Probab=57.69 E-value=7 Score=26.29 Aligned_cols=32 Identities=19% Similarity=0.221 Sum_probs=23.3
Q ss_pred ceecCCCCcccccHHHHHhhhhhcCCCCCCccccc
Q 028989 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCP 77 (200)
Q Consensus 43 ~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCP 77 (200)
..-.|+||...+-...|-.|.+ + + ....+.||
T Consensus 43 r~v~C~~C~~~~~~~~l~~H~~-~-C-p~~~v~C~ 74 (76)
T 2yuc_A 43 RRLKCEFCGCDFSGEAYESHEG-M-C-PQESSGPS 74 (76)
T ss_dssp SCCCCSSSCCCCCHHHHHHTTT-S-C-TTSSCCCS
T ss_pred cceECCCCCCccCHHHHHHHHh-H-C-CCCccCCC
Confidence 4678999999999999999983 2 2 22345565
No 271
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=57.00 E-value=2.7 Score=31.53 Aligned_cols=15 Identities=20% Similarity=0.682 Sum_probs=12.4
Q ss_pred CCccceecCCCCccc
Q 028989 39 DDLNAMFLCPFCAED 53 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~ 53 (200)
..+.+.|.||||+..
T Consensus 31 ~~q~~ky~CpfCgk~ 45 (92)
T 3iz5_m 31 VSQHSKYFCEFCGKF 45 (92)
T ss_dssp HHHHSCBCCTTTCSS
T ss_pred HHHhccccCcccCCC
Confidence 356789999999985
No 272
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=56.51 E-value=4.5 Score=30.31 Aligned_cols=30 Identities=27% Similarity=0.489 Sum_probs=23.3
Q ss_pred CccceecCCCCcccccHHHHHhhhhhcCCCCCCcc-cccccccc
Q 028989 40 DLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNG-VCPVCAKR 82 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~v-VCPICa~~ 82 (200)
+.+..|.|+-|+..|... .... .||.|...
T Consensus 69 ~~p~~~~C~~CG~~~e~~-------------~~~~~~CP~Cgs~ 99 (119)
T 2kdx_A 69 DEKVELECKDCSHVFKPN-------------ALDYGVCEKCHSK 99 (119)
T ss_dssp EECCEEECSSSSCEECSC-------------CSTTCCCSSSSSC
T ss_pred eccceEEcCCCCCEEeCC-------------CCCCCcCccccCC
Confidence 557799999999987762 2346 89999876
No 273
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=56.43 E-value=1.3 Score=31.98 Aligned_cols=44 Identities=27% Similarity=0.628 Sum_probs=26.3
Q ss_pred CccceecCCCCcccc-cHHHH--Hhh-----hhhcCCCCCCcccccccccccch
Q 028989 40 DLNAMFLCPFCAEDF-DIVGL--CCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 40 d~r~~F~CPfC~e~f-D~~~L--c~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
+....+.||.|.+.+ +-..| |-| |-..+-. ....||+|...+..
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~--~~~~CP~Cr~~~~~ 62 (108)
T 2ckl_A 11 ELNPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLE--TSKYCPICDVQVHK 62 (108)
T ss_dssp HHGGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHT--SCSBCTTTCCBSCS
T ss_pred ccCCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHH--hCCcCcCCCccccc
Confidence 345578899998864 33333 333 3333221 13689999988664
No 274
>3izc_m 60S ribosomal protein RPL43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins; NMR {Saccharomyces cerevisiae} PDB: 3izs_m 3o58_g 3o5h_g 3u5e_p 3u5i_p 4b6a_p 1s1i_9
Probab=56.39 E-value=2.7 Score=31.52 Aligned_cols=15 Identities=27% Similarity=0.691 Sum_probs=12.3
Q ss_pred CCccceecCCCCccc
Q 028989 39 DDLNAMFLCPFCAED 53 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~ 53 (200)
..+.+.|.||||+..
T Consensus 31 ~~q~~ky~CpfCgk~ 45 (92)
T 3izc_m 31 IQQHARYDCSFCGKK 45 (92)
T ss_dssp HHHHSCCCCSSSCSS
T ss_pred HHHhcCCcCCCCCCc
Confidence 356789999999985
No 275
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=56.29 E-value=7.9 Score=25.42 Aligned_cols=26 Identities=23% Similarity=0.318 Sum_probs=21.0
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIE 70 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e 70 (200)
.|.|+.|++. -....|..|+.. |..+
T Consensus 32 p~~C~~C~k~F~~~~~L~~H~~~-Htge 58 (60)
T 4gzn_C 32 PRSCPECGKCFRDQSEVNRHLKV-HQNK 58 (60)
T ss_dssp CEECTTTCCEESSHHHHHHHGGG-GSCC
T ss_pred CeECCCCCCCcCCHHHHHHHhCc-cCCC
Confidence 5999999997 677889999864 6554
No 276
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=56.26 E-value=6.5 Score=25.25 Aligned_cols=24 Identities=17% Similarity=0.318 Sum_probs=19.6
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDH 67 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH 67 (200)
.|.|+.|++. -....|..|+...+
T Consensus 45 ~~~C~~C~k~f~~~~~L~~H~~~H~ 69 (74)
T 2lce_A 45 PYRCNICGAQFNRPANLKTHTRIHS 69 (74)
T ss_dssp SEECTTTCCEESCHHHHHHHHHHHC
T ss_pred CEECCCCCchhCCHHHHHHHHHhcC
Confidence 4999999997 56788999987643
No 277
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=56.07 E-value=1 Score=32.42 Aligned_cols=45 Identities=22% Similarity=0.507 Sum_probs=26.4
Q ss_pred CccceecCCCCcccccHHHH---Hhh-----hhhcCCCCCCcccccccccccch
Q 028989 40 DLNAMFLCPFCAEDFDIVGL---CCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~~L---c~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
.+...+.||.|.+.|..... |-| |-..+-.. +...||+|...+..
T Consensus 18 ~l~~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~-~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 18 SIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTE-QRAQCPHCRAPLQL 70 (100)
T ss_dssp HHHHHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHH-TCSBCTTTCCBCCG
T ss_pred cCCCCCCCccCCccccCccccCCCCChhhHHHHHHHHHH-CcCCCCCCCCcCCH
Confidence 34567899999887554332 333 22222111 12689999998764
No 278
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=55.97 E-value=6.1 Score=26.31 Aligned_cols=14 Identities=36% Similarity=0.971 Sum_probs=11.1
Q ss_pred CCccceecCCCCcc
Q 028989 39 DDLNAMFLCPFCAE 52 (200)
Q Consensus 39 ~d~r~~F~CPfC~e 52 (200)
+|++..+.||.|+.
T Consensus 31 ~~lP~dw~CP~Cg~ 44 (52)
T 1e8j_A 31 EDLPDDWACPVCGA 44 (52)
T ss_dssp TSSCTTCCCSSSCC
T ss_pred HHCCCCCcCCCCCC
Confidence 35677889999986
No 279
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=55.67 E-value=8.6 Score=20.16 Aligned_cols=21 Identities=24% Similarity=0.545 Sum_probs=15.4
Q ss_pred ecCC--CCccc-ccHHHHHhhhhh
Q 028989 45 FLCP--FCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 45 F~CP--fC~e~-fD~~~Lc~H~~~ 65 (200)
|.|+ .|++. -....|..|+..
T Consensus 3 ~~C~~~~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 3 FMCTWSYCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp CBCCSTTCCCBCSSHHHHHHHHTT
T ss_pred cCCcCCCCCcccCCHhHHHHHHHH
Confidence 7787 88886 456778888754
No 280
>4a17_Y RPL37A, 60S ribosomal protein L32; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_Y 4a1c_Y 4a1e_Y
Probab=54.65 E-value=3 Score=31.94 Aligned_cols=15 Identities=33% Similarity=0.753 Sum_probs=12.3
Q ss_pred CCccceecCCCCccc
Q 028989 39 DDLNAMFLCPFCAED 53 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~ 53 (200)
..+...|.||||+..
T Consensus 31 ~~q~aky~CpfCgk~ 45 (103)
T 4a17_Y 31 ITQHAKYGCPFCGKV 45 (103)
T ss_dssp HHHHSCEECTTTCCE
T ss_pred HHhhcCCCCCCCCCc
Confidence 356789999999985
No 281
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=54.63 E-value=0.96 Score=31.95 Aligned_cols=42 Identities=26% Similarity=0.562 Sum_probs=23.9
Q ss_pred cceecCCCCcccccH---H--HHHhhh-----hhcCCCCCCcccccccccccch
Q 028989 42 NAMFLCPFCAEDFDI---V--GLCCHI-----DEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 42 r~~F~CPfC~e~fD~---~--~Lc~H~-----~~eH~~e~k~vVCPICa~~v~~ 85 (200)
.....||.|.++|.. . .-|.|. ....- .++..||+|...+..
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl--~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWL--QKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHH--TTTCBCTTTCCBSSC
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHH--HcCCcCcCcCccCCC
Confidence 346689999876543 1 114442 22211 134589999887643
No 282
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=53.71 E-value=0.83 Score=33.05 Aligned_cols=13 Identities=31% Similarity=0.675 Sum_probs=9.5
Q ss_pred Ccccccccccccc
Q 028989 72 KNGVCPVCAKRVG 84 (200)
Q Consensus 72 k~vVCPICa~~v~ 84 (200)
+...||+|...++
T Consensus 81 ~~~~CP~CR~~~~ 93 (114)
T 1v87_A 81 GSLQCPSCKTIYG 93 (114)
T ss_dssp SCCBCTTTCCBSS
T ss_pred CCCcCCCCCCccC
Confidence 4568999987654
No 283
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=53.07 E-value=0.47 Score=36.88 Aligned_cols=44 Identities=25% Similarity=0.591 Sum_probs=27.3
Q ss_pred CccceecCCCCcccccHH-HH--Hhh-----hhhcCCCCCCcccccccccccc
Q 028989 40 DLNAMFLCPFCAEDFDIV-GL--CCH-----IDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~-~L--c~H-----~~~eH~~e~k~vVCPICa~~v~ 84 (200)
+....+.||.|.+.|... .+ |-| |-...- ......||+|...+.
T Consensus 50 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~ 101 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKNTMTTKECLHRFCADCIITAL-RSGNKECPTCRKKLV 101 (165)
T ss_dssp CCHHHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHH-HTTCCBCTTTCCBCC
T ss_pred hCCCCCCCcccChHhhCcCEeCCCCChhHHHHHHHHH-HhCcCCCCCCCCcCC
Confidence 456789999999875433 22 334 332221 123578999999864
No 284
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=52.60 E-value=3.4 Score=32.22 Aligned_cols=34 Identities=29% Similarity=0.609 Sum_probs=23.0
Q ss_pred CCccceecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccc
Q 028989 39 DDLNAMFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~ 84 (200)
..+...|.||||+.+ +--.+ ..--.|+-|-..+.
T Consensus 55 ~~q~akytCPfCGk~~vKR~a------------vGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 55 SEMNEDHACPNCGEDRVDRQG------------TGIWQCSYCDYKFT 89 (116)
T ss_dssp HHHHSCEECSSSCCEEEEEEE------------TTEEEETTTCCEEE
T ss_pred HHhccCCcCCCCCCceeEecC------------ceeEECCCCCCEEE
Confidence 456789999999984 43322 12346999988744
No 285
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=52.52 E-value=2.4 Score=29.87 Aligned_cols=48 Identities=17% Similarity=0.399 Sum_probs=29.0
Q ss_pred eecCCCCcccccHHHH-----Hhh-----hhhcCCC----C--CCcccccc--cccc--cchhhhhhh
Q 028989 44 MFLCPFCAEDFDIVGL-----CCH-----IDEDHPI----E--AKNGVCPV--CAKR--VGTDIVSHI 91 (200)
Q Consensus 44 ~F~CPfC~e~fD~~~L-----c~H-----~~~eH~~----e--~k~vVCPI--Ca~~--v~~d~v~Hl 91 (200)
.|.||.|.+++..... |-| |-..|-. + ..+..||. |... +..+.+..+
T Consensus 5 ~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~~~~~~~~i~~l 72 (94)
T 1wim_A 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEIECM 72 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSCCEECHHHHHHH
T ss_pred CcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCCCccCHHHHHHH
Confidence 5788888876554321 444 2111111 1 13578999 9999 888777655
No 286
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=51.66 E-value=9.5 Score=19.22 Aligned_cols=21 Identities=24% Similarity=0.396 Sum_probs=15.2
Q ss_pred ecCC--CCccc-ccHHHHHhhhhh
Q 028989 45 FLCP--FCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 45 F~CP--fC~e~-fD~~~Lc~H~~~ 65 (200)
|.|+ .|++. -....|..|...
T Consensus 3 ~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 3 YVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp EEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCcCCcCcCccCCHHHHHHHHHH
Confidence 6788 88886 456777777654
No 287
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=51.47 E-value=9.8 Score=26.94 Aligned_cols=26 Identities=23% Similarity=0.489 Sum_probs=21.7
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCC
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPI 69 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~ 69 (200)
.|.|+.|++. -....|..|+...|..
T Consensus 100 ~~~C~~C~k~f~~~~~l~~H~~~h~~~ 126 (129)
T 2wbt_A 100 TKVCPVCKKEFTSTDSALDHVCKKHNI 126 (129)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred CCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence 4999999997 5677899999988753
No 288
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.46 E-value=1.1 Score=30.20 Aligned_cols=42 Identities=31% Similarity=0.648 Sum_probs=23.4
Q ss_pred ceecCCCCcccccHH----HH-HhhhhhcCCCC---CCcccccccccccc
Q 028989 43 AMFLCPFCAEDFDIV----GL-CCHIDEDHPIE---AKNGVCPVCAKRVG 84 (200)
Q Consensus 43 ~~F~CPfC~e~fD~~----~L-c~H~~~eH~~e---~k~vVCPICa~~v~ 84 (200)
....||.|.++|+.. .| |.|+-=.++.. .++..||+|...++
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSG 71 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCC
Confidence 345799998876532 12 55542222211 12357999987754
No 289
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=51.44 E-value=2.9 Score=22.75 Aligned_cols=21 Identities=38% Similarity=0.743 Sum_probs=13.7
Q ss_pred ecCCCCccccc-HHHHHhhhhh
Q 028989 45 FLCPFCAEDFD-IVGLCCHIDE 65 (200)
Q Consensus 45 F~CPfC~e~fD-~~~Lc~H~~~ 65 (200)
|.|+.|++.|. ...|..|+..
T Consensus 3 ~~C~~C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 3 FACPACPKRFMRSDALSKHIKT 24 (32)
T ss_dssp SSSSSSCTTHHHHHTTSSSTTS
T ss_pred CCCCCCCcccCCHHHHHHHHHH
Confidence 67888888643 4556667643
No 290
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=51.35 E-value=1.3 Score=31.54 Aligned_cols=45 Identities=20% Similarity=0.446 Sum_probs=24.1
Q ss_pred ccceecCCCCcccccHHH--HHhh-----hhhcCCCC-CCcccccccccccch
Q 028989 41 LNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIE-AKNGVCPVCAKRVGT 85 (200)
Q Consensus 41 ~r~~F~CPfC~e~fD~~~--Lc~H-----~~~eH~~e-~k~vVCPICa~~v~~ 85 (200)
....+.||.|.+.+.... -|-| |-..+-.. .....||+|...+..
T Consensus 18 ~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 18 MQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHHHTSCSSSCCCCSSCCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred ccCCCCCcccChhhcCeEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 345678888887643321 1222 22221111 123589999998664
No 291
>2a25_A Ubiquitin ligase SIAH1; protein-peptide complex, ligase; 2.20A {Homo sapiens} PDB: 2an6_A 1k2f_A
Probab=51.22 E-value=6.1 Score=32.06 Aligned_cols=11 Identities=27% Similarity=0.585 Sum_probs=5.5
Q ss_pred hhhhhhhhhcc
Q 028989 86 DIVSHITMQHG 96 (200)
Q Consensus 86 d~v~Hlt~qH~ 96 (200)
++..|++..|+
T Consensus 54 ~l~~H~~~~H~ 64 (193)
T 2a25_A 54 AVMPHLMHQHK 64 (193)
T ss_dssp THHHHHHHHCT
T ss_pred HHHHHHHHHCC
Confidence 45555554444
No 292
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.81 E-value=8.4 Score=25.92 Aligned_cols=24 Identities=25% Similarity=0.420 Sum_probs=20.3
Q ss_pred ceecCCCCccccc-HHHHHhhhhhc
Q 028989 43 AMFLCPFCAEDFD-IVGLCCHIDED 66 (200)
Q Consensus 43 ~~F~CPfC~e~fD-~~~Lc~H~~~e 66 (200)
-.|+||=|+..|. ...|..|+.-+
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmkyc 35 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMCYC 35 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhhhc
Confidence 5899999999877 78899998743
No 293
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.71 E-value=13 Score=22.31 Aligned_cols=23 Identities=26% Similarity=0.509 Sum_probs=18.4
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDED 66 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~e 66 (200)
-|.|++ |++. .....|..|+...
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~H 34 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKVH 34 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHhc
Confidence 489987 9997 6788889998653
No 294
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=49.52 E-value=12 Score=26.24 Aligned_cols=26 Identities=27% Similarity=0.737 Sum_probs=21.1
Q ss_pred eecCCCCcccc-cHHHHHhhhhhcCCC
Q 028989 44 MFLCPFCAEDF-DIVGLCCHIDEDHPI 69 (200)
Q Consensus 44 ~F~CPfC~e~f-D~~~Lc~H~~~eH~~ 69 (200)
.|.|+.|++.| ....|..|+...|..
T Consensus 62 ~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 62 MFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 59999999985 568899997777853
No 295
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=49.16 E-value=12 Score=22.26 Aligned_cols=23 Identities=35% Similarity=0.559 Sum_probs=14.3
Q ss_pred ceecCCCCccc-ccHHHHHhhhhh
Q 028989 43 AMFLCPFCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~Lc~H~~~ 65 (200)
+.|.||-|... =|...|..|.++
T Consensus 2 ~k~~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 2 SDFCCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CCEECTTSSCEESSHHHHHHHHHH
T ss_pred CcccCccccccCcChHHHHHHHHH
Confidence 35667777663 666666666554
No 296
>2l7x_A Envelope glycoprotein; cytoplasmic tail, viral protein; NMR {Crimean-congo hemorrhagic fever virus}
Probab=49.04 E-value=5.7 Score=28.82 Aligned_cols=21 Identities=33% Similarity=0.838 Sum_probs=17.0
Q ss_pred eecCCCCcccccHHHHHhhhh
Q 028989 44 MFLCPFCAEDFDIVGLCCHID 64 (200)
Q Consensus 44 ~F~CPfC~e~fD~~~Lc~H~~ 64 (200)
.=-||||.--+...||..|+.
T Consensus 30 ~NiCPYC~nRls~eGl~RHV~ 50 (77)
T 2l7x_A 30 YNICPYCASRLTSDGLARHVT 50 (77)
T ss_dssp TTCCTTTCCCCCTTTHHHHHT
T ss_pred cccChhhhccCCccchhhhcc
Confidence 347999988888889988873
No 297
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=48.32 E-value=7.9 Score=25.09 Aligned_cols=41 Identities=24% Similarity=0.714 Sum_probs=23.8
Q ss_pred eecCCCCcccccHH--------H-HHhh-----hhhcCCCCCCcccccccccccchh
Q 028989 44 MFLCPFCAEDFDIV--------G-LCCH-----IDEDHPIEAKNGVCPVCAKRVGTD 86 (200)
Q Consensus 44 ~F~CPfC~e~fD~~--------~-Lc~H-----~~~eH~~e~k~vVCPICa~~v~~d 86 (200)
.+.||.|.+.+... . -|-| |-...- .+...||+|...+..+
T Consensus 10 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~~~ 64 (71)
T 3ng2_A 10 TVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSL--KNANTCPTCRKKINHK 64 (71)
T ss_dssp CCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHH--HHCSBCTTTCCBCCCC
T ss_pred CCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHH--HcCCCCCCCCCccChh
Confidence 56899999886553 1 1333 221111 1224899999887643
No 298
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=46.31 E-value=1.9 Score=31.65 Aligned_cols=44 Identities=27% Similarity=0.496 Sum_probs=26.4
Q ss_pred ccceecCCCCcccc-cHHHH--HhhhhhcCCCCCC-cccccccccccc
Q 028989 41 LNAMFLCPFCAEDF-DIVGL--CCHIDEDHPIEAK-NGVCPVCAKRVG 84 (200)
Q Consensus 41 ~r~~F~CPfC~e~f-D~~~L--c~H~~~eH~~e~k-~vVCPICa~~v~ 84 (200)
....+.||.|.+.| +-+.| |-|.-=..+...- ...||+|...+.
T Consensus 19 l~~~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~~~CP~Cr~~~~ 66 (117)
T 1jm7_B 19 LEKLLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIGTGCPVCYTPAW 66 (117)
T ss_dssp HHHTTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTTTBCSSSCCBCS
T ss_pred chhCCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhcCCCcCCCCcCc
Confidence 34578999999864 44444 5553322222211 157999998864
No 299
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=44.73 E-value=14 Score=19.27 Aligned_cols=22 Identities=18% Similarity=0.285 Sum_probs=15.5
Q ss_pred eecCC--CCccc-ccHHHHHhhhhh
Q 028989 44 MFLCP--FCAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CP--fC~e~-fD~~~Lc~H~~~ 65 (200)
.|.|+ .|++. .....|..|+..
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHH
Confidence 37888 78886 456677778754
No 300
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=41.92 E-value=16 Score=20.23 Aligned_cols=22 Identities=18% Similarity=0.338 Sum_probs=17.0
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhh
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~ 65 (200)
.|.|++ |++. -....|..|+..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 589986 9997 466778888764
No 301
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=41.81 E-value=14 Score=24.67 Aligned_cols=11 Identities=27% Similarity=0.763 Sum_probs=5.8
Q ss_pred cceecCCCCcc
Q 028989 42 NAMFLCPFCAE 52 (200)
Q Consensus 42 r~~F~CPfC~e 52 (200)
-++-.|||||.
T Consensus 21 lP~IrCpyCGy 31 (48)
T 4ayb_P 21 LPGVRCPYCGY 31 (48)
T ss_dssp CSSSCCTTTCC
T ss_pred CCCcccCccCc
Confidence 34555555554
No 302
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=41.48 E-value=2.4 Score=27.65 Aligned_cols=41 Identities=22% Similarity=0.481 Sum_probs=22.5
Q ss_pred eecCCCCcc-cccHH------HHHhh-----hhhcCCCCCCcccccccccccch
Q 028989 44 MFLCPFCAE-DFDIV------GLCCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 44 ~F~CPfC~e-~fD~~------~Lc~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
++.||.|.+ .+... .-|-| |-..... .+...||+|...+..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~-~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFV-RGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHH-TTSSSCTTTCCCCSS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHH-cCCCcCCCCCCcccc
Confidence 457888887 43322 12333 3332211 234679999988765
No 303
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=41.13 E-value=13 Score=31.02 Aligned_cols=25 Identities=28% Similarity=0.545 Sum_probs=21.5
Q ss_pred cceecCCCCcccc-c-HHHHHhhhhhc
Q 028989 42 NAMFLCPFCAEDF-D-IVGLCCHIDED 66 (200)
Q Consensus 42 r~~F~CPfC~e~f-D-~~~Lc~H~~~e 66 (200)
.....|..|++.| . +..|-.|+++|
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e 193 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQEE 193 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHHH
Confidence 4578999999997 3 99999999886
No 304
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.70 E-value=7.6 Score=26.19 Aligned_cols=42 Identities=26% Similarity=0.424 Sum_probs=23.6
Q ss_pred ceecCCCCccc-ccHHHH-Hhhh-hhcCCCCCCcccccccccccch
Q 028989 43 AMFLCPFCAED-FDIVGL-CCHI-DEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 43 ~~F~CPfC~e~-fD~~~L-c~H~-~~eH~~e~k~vVCPICa~~v~~ 85 (200)
....|+.|.+. -+.+.| |-|+ -=..+.. +...||+|...+..
T Consensus 14 ~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~-~~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 14 NSKDCVVCQNGTVNWVLLPCRHTCLCDGCVK-YFQQCPMCRQFVQE 58 (68)
T ss_dssp CSSCCSSSSSSCCCCEETTTTBCCSCTTHHH-HCSSCTTTCCCCCC
T ss_pred CCCCCCCcCcCCCCEEEECCCChhhhHHHHh-cCCCCCCCCcchhc
Confidence 35679999885 454432 3333 1111111 23589999988654
No 305
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=39.05 E-value=13 Score=22.28 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=16.7
Q ss_pred eecCCCCccc-ccHHHHHhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHI 63 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~ 63 (200)
-|.|+.|++. -....|..|.
T Consensus 8 p~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEETTTTEECSCHHHHHHHH
T ss_pred CeECCCCCCccCCHhHccCcC
Confidence 5999999997 5567888887
No 306
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=38.80 E-value=14 Score=26.53 Aligned_cols=46 Identities=15% Similarity=0.231 Sum_probs=26.3
Q ss_pred CCccceecCCCCcccccHHH--HHhh-----hhhcCCCCCCcccccccccccch
Q 028989 39 DDLNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~--Lc~H-----~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
++....+.||.|.+.+.... -|-| |-..+- ......||+|...+..
T Consensus 18 ~~~~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~-~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 18 AHFVKSISCQICEHILADPVETSCKHLFCRICILRCL-KVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHHHHHTBCTTTCSBCSSEEECTTSCEEEHHHHHHHH-HHTCSBCTTTCCBCCG
T ss_pred HhccCCCCCCCCCcHhcCcEEcCCCCcccHHHHHHHH-hHCcCcCCCCCCCCCH
Confidence 45667889999988654321 1222 111111 1124579999998765
No 307
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=38.11 E-value=4.5 Score=27.44 Aligned_cols=39 Identities=28% Similarity=0.531 Sum_probs=24.8
Q ss_pred ccceecCCCCcccc-cHHH-------HHhhhhhcCCCCCCcccccccccccch
Q 028989 41 LNAMFLCPFCAEDF-DIVG-------LCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 41 ~r~~F~CPfC~e~f-D~~~-------Lc~H~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
....+.||.|.+.+ +... +|..|.... ..||+|...+..
T Consensus 21 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~------~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 21 LQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV------DKCPMCYTVITF 67 (74)
T ss_dssp HHHHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTC------SBCTTTCCBCSE
T ss_pred CccCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcC------ccCCCcCcCccC
Confidence 34568999999863 4333 333333332 689999988654
No 308
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=37.81 E-value=3.3 Score=31.91 Aligned_cols=44 Identities=20% Similarity=0.406 Sum_probs=26.2
Q ss_pred CCccceecCCCCcccccHHH--HHhh-----hhhcCCCCCCccccccccccc
Q 028989 39 DDLNAMFLCPFCAEDFDIVG--LCCH-----IDEDHPIEAKNGVCPVCAKRV 83 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~--Lc~H-----~~~eH~~e~k~vVCPICa~~v 83 (200)
+.....|.||.|.+.|.... -|-| |-... ...+...||+|...+
T Consensus 26 ~~l~~~~~C~IC~~~~~~pv~~~CgH~FC~~Ci~~~-~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 26 TKLEAKYLCSACRNVLRRPFQAQCGHRYCSFCLASI-LSSGPQNCAACVHEG 76 (141)
T ss_dssp GGCCGGGBCTTTCSBCSSEEECTTSCEEEHHHHHHH-GGGSCEECHHHHHTT
T ss_pred ccCCcCcCCCCCChhhcCcEECCCCCccCHHHHHHH-HhcCCCCCCCCCCcc
Confidence 45667899999998644321 2333 33332 123446899998753
No 309
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=37.67 E-value=9.4 Score=27.34 Aligned_cols=35 Identities=20% Similarity=0.429 Sum_probs=23.3
Q ss_pred ecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccccc
Q 028989 45 FLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 45 F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~ 84 (200)
..||.|.+.++...+..- ........||||-..+.
T Consensus 49 ~~CP~Cr~~~~~~~l~~l-----~i~~~~~~C~iC~~~~~ 83 (133)
T 4ap4_A 49 NTCPTCRKKINHKRYHPI-----YIGSGTVSCPICMDGYS 83 (133)
T ss_dssp SBCTTTCCBCTTTCEEEC-----BCSSSSCBCTTTCCBHH
T ss_pred CCCCCCCCcCcccccccc-----ccCCCCCCCCCCCCccc
Confidence 389999988766544221 23445678999987654
No 310
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=37.45 E-value=11 Score=30.23 Aligned_cols=26 Identities=31% Similarity=0.732 Sum_probs=17.3
Q ss_pred ecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 45 FLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 45 F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
=+||-|..++.- .+....|||-|+--
T Consensus 28 P~CP~C~seytY------------eDg~l~vCPeC~hE 53 (138)
T 2akl_A 28 PPCPQCNSEYTY------------EDGALLVCPECAHE 53 (138)
T ss_dssp CCCTTTCCCCCE------------ECSSSEEETTTTEE
T ss_pred CCCCCCCCcceE------------ecCCeEECCccccc
Confidence 489999876431 12345799999864
No 311
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=37.30 E-value=16 Score=26.55 Aligned_cols=11 Identities=27% Similarity=0.921 Sum_probs=8.9
Q ss_pred cCCCCcccccH
Q 028989 46 LCPFCAEDFDI 56 (200)
Q Consensus 46 ~CPfC~e~fD~ 56 (200)
+||.|+..++.
T Consensus 49 ~CPvCgs~l~~ 59 (112)
T 1l8d_A 49 KCPVCGRELTD 59 (112)
T ss_dssp ECTTTCCEECH
T ss_pred CCCCCCCcCCH
Confidence 69999987774
No 312
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=37.30 E-value=21 Score=19.46 Aligned_cols=22 Identities=27% Similarity=0.520 Sum_probs=16.5
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhh
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDE 65 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~ 65 (200)
.|.|++ |++. -....|..|+..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 488995 9987 556778888764
No 313
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=36.66 E-value=12 Score=26.31 Aligned_cols=13 Identities=46% Similarity=1.168 Sum_probs=6.6
Q ss_pred CccceecCCCCcc
Q 028989 40 DLNAMFLCPFCAE 52 (200)
Q Consensus 40 d~r~~F~CPfC~e 52 (200)
|++..+.||.|+.
T Consensus 36 ~lPddw~CP~Cga 48 (70)
T 1dx8_A 36 DLSDSFMCPACRS 48 (70)
T ss_dssp GSCTTCBCTTTCC
T ss_pred hCCCCCcCCCCCC
Confidence 3444555555554
No 314
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=36.52 E-value=6.4 Score=30.63 Aligned_cols=19 Identities=21% Similarity=0.576 Sum_probs=15.3
Q ss_pred CccceecCCCCcccccHHH
Q 028989 40 DLNAMFLCPFCAEDFDIVG 58 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~~ 58 (200)
+.+..+.|+-|+..+....
T Consensus 66 ~~p~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 66 EEEAVFKCRNCNYEWKLKE 84 (139)
T ss_dssp EECCEEEETTTCCEEEGGG
T ss_pred ecCCcEECCCCCCEEeccc
Confidence 5678999999999877644
No 315
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=35.90 E-value=17 Score=25.31 Aligned_cols=30 Identities=27% Similarity=0.571 Sum_probs=22.1
Q ss_pred cceecCCCCcccccHHHHHhhhhhcCCCCCCccccccccccc
Q 028989 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRV 83 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v 83 (200)
.-.|.|.-|+.++++. ....+-||-|..+|
T Consensus 19 ~v~Y~C~~Cg~~~~l~------------~~~~iRC~~CG~RI 48 (63)
T 3h0g_L 19 TMIYLCADCGARNTIQ------------AKEVIRCRECGHRV 48 (63)
T ss_dssp CCCCBCSSSCCBCCCC------------SSSCCCCSSSCCCC
T ss_pred CeEEECCCCCCeeecC------------CCCceECCCCCcEE
Confidence 4689999999988743 12457899997653
No 316
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=35.63 E-value=7.8 Score=29.48 Aligned_cols=37 Identities=27% Similarity=0.564 Sum_probs=0.0
Q ss_pred cCCCCcccccHH--------------------HHHhhhhhcCCCCC---Ccccccccccc
Q 028989 46 LCPFCAEDFDIV--------------------GLCCHIDEDHPIEA---KNGVCPVCAKR 82 (200)
Q Consensus 46 ~CPfC~e~fD~~--------------------~Lc~H~~~eH~~e~---k~vVCPICa~~ 82 (200)
.|+.|-++|+.. .-|.|.--.|+.+. ++.+||+|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp ------------------------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 688888877643 14778877777755 45689999875
No 317
>2qgp_A HNH endonuclease; Q39X46, GMR87, X-RAY, NESG, structural genomics, PSI-2, protein structure initiative; 2.60A {Geobacter metallireducens gs-15}
Probab=34.25 E-value=4.1 Score=30.48 Aligned_cols=43 Identities=26% Similarity=0.352 Sum_probs=24.4
Q ss_pred cceecCCCCcccccHHHH-HhhhhhcC---CCCCCc--ccccccccccc
Q 028989 42 NAMFLCPFCAEDFDIVGL-CCHIDEDH---PIEAKN--GVCPVCAKRVG 84 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~~L-c~H~~~eH---~~e~k~--vVCPICa~~v~ 84 (200)
++.+.|+||+..++...+ +.|+.--- ..+..| .+|+.|-...+
T Consensus 33 r~~~~C~yCg~~~~~~~~~vDHIiP~s~gG~~~~~Nl~~lC~~CN~~K~ 81 (112)
T 2qgp_A 33 IARGICHYCGEIFPPEELTMDHLVPVVRGGKSTRGNVVPACKECNNRKK 81 (112)
T ss_dssp HHHTBCTTTCCBCCGGGEEEEESSCTTTTCCCSTTTEEEEEHHHHHHHH
T ss_pred HcCCcCCCCCCcCCCCCcEEEEEeehhcCCCCChhhChhhCHHHHHHHc
Confidence 356799999998764322 34543211 112233 46888876644
No 318
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.97 E-value=9.3 Score=27.36 Aligned_cols=16 Identities=19% Similarity=0.297 Sum_probs=11.7
Q ss_pred hhhhhhhhhhccchhh
Q 028989 85 TDIVSHITMQHGNFFK 100 (200)
Q Consensus 85 ~d~v~Hlt~qH~~~~K 100 (200)
.+|.+||..-|..-++
T Consensus 49 S~L~rHL~~~H~~e~~ 64 (76)
T 2djr_A 49 TALWKHLKSMHREELE 64 (76)
T ss_dssp CHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHCHHHHH
Confidence 4788888777777665
No 319
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=32.25 E-value=3.2 Score=31.32 Aligned_cols=41 Identities=29% Similarity=0.697 Sum_probs=24.1
Q ss_pred cceecCCCCcccc-cHHHH-Hhh-----hhhcCCCCCCcccccccccccc
Q 028989 42 NAMFLCPFCAEDF-DIVGL-CCH-----IDEDHPIEAKNGVCPVCAKRVG 84 (200)
Q Consensus 42 r~~F~CPfC~e~f-D~~~L-c~H-----~~~eH~~e~k~vVCPICa~~v~ 84 (200)
..++.||.|.+.+ |.+.| |-| |-...- .+...||+|...+.
T Consensus 51 ~~~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~--~~~~~CP~Cr~~~~ 98 (138)
T 4ayc_A 51 ENELQCIICSEYFIEAVTLNCAHSFCSYCINEWM--KRKIECPICRKDIK 98 (138)
T ss_dssp HHHSBCTTTCSBCSSEEEETTSCEEEHHHHHHHT--TTCSBCTTTCCBCC
T ss_pred cccCCCcccCcccCCceECCCCCCccHHHHHHHH--HcCCcCCCCCCcCC
Confidence 3467899999864 33322 334 333322 23457999988754
No 320
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=32.12 E-value=18 Score=32.38 Aligned_cols=33 Identities=12% Similarity=0.237 Sum_probs=21.8
Q ss_pred cceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc-cchhh
Q 028989 42 NAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR-VGTDI 87 (200)
Q Consensus 42 r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~-v~~d~ 87 (200)
.+.-.||||+..+.. +-+.-+||||--- ||.+-
T Consensus 285 ~~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~a 318 (325)
T 3mv2_A 285 TPSVSDPLTGSKYVI-------------TEKDKIDRIAMISKIGAPA 318 (325)
T ss_dssp SCEEECTTTCCEEEG-------------GGTTSBCSSSSCBBTTCCC
T ss_pred CCCccCCCCCCeech-------------hhCCCCCCCCcCcccCCCc
Confidence 346789999986532 1245699999763 66554
No 321
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=31.98 E-value=31 Score=24.70 Aligned_cols=32 Identities=16% Similarity=0.197 Sum_probs=23.1
Q ss_pred eecCCC--Cccc-ccHHHHHhhhhhcCCCCCCcccc
Q 028989 44 MFLCPF--CAED-FDIVGLCCHIDEDHPIEAKNGVC 76 (200)
Q Consensus 44 ~F~CPf--C~e~-fD~~~Lc~H~~~eH~~e~k~vVC 76 (200)
-|.|++ |++- -....|..|+...|..+ |+.+|
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHTgE-KP~~~ 61 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHKSD-LPAFS 61 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSSSC-CCCCC
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCCCC-CCccc
Confidence 489976 9997 56678899987777753 34444
No 322
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=31.62 E-value=8.8 Score=24.45 Aligned_cols=34 Identities=26% Similarity=0.584 Sum_probs=22.1
Q ss_pred eecCCCCcc-cccHHHHHhhhhhcCCCCCCcccccccccccchhhh
Q 028989 44 MFLCPFCAE-DFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGTDIV 88 (200)
Q Consensus 44 ~F~CPfC~e-~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~~d~v 88 (200)
.+.||-|+. .+.. . .+....||+.|..-+..+.|
T Consensus 5 ~~~CP~C~~~~l~~---------d--~~~gelvC~~CG~v~~e~~i 39 (50)
T 1pft_A 5 QKVCPACESAELIY---------D--PERGEIVCAKCGYVIEENII 39 (50)
T ss_dssp CCSCTTTSCCCEEE---------E--TTTTEEEESSSCCBCCCCCC
T ss_pred cEeCcCCCCcceEE---------c--CCCCeEECcccCCccccccc
Confidence 578999976 3211 1 13456899999877666554
No 323
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=31.08 E-value=14 Score=24.48 Aligned_cols=14 Identities=36% Similarity=1.087 Sum_probs=11.9
Q ss_pred CCccceecCCCCcc
Q 028989 39 DDLNAMFLCPFCAE 52 (200)
Q Consensus 39 ~d~r~~F~CPfC~e 52 (200)
+|++..+.||.|+.
T Consensus 30 ~~lP~dw~CP~Cg~ 43 (52)
T 1yk4_A 30 EDLPDDWVCPLCGA 43 (52)
T ss_dssp GGSCTTCBCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 36788899999997
No 324
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=30.71 E-value=14 Score=24.75 Aligned_cols=13 Identities=38% Similarity=0.925 Sum_probs=11.4
Q ss_pred CccceecCCCCcc
Q 028989 40 DLNAMFLCPFCAE 52 (200)
Q Consensus 40 d~r~~F~CPfC~e 52 (200)
|++..+.||.|+.
T Consensus 32 ~lP~dw~CP~Cga 44 (55)
T 2v3b_B 32 DIPADWVCPDCGV 44 (55)
T ss_dssp GSCTTCCCTTTCC
T ss_pred HCCCCCcCCCCCC
Confidence 5788899999997
No 325
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=29.98 E-value=5.2 Score=29.78 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=15.5
Q ss_pred ceecCCCCcccccHHHHHhhhhhcCCCCCCc
Q 028989 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKN 73 (200)
Q Consensus 43 ~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~ 73 (200)
..|.||||..- . .. ..-+..+++.+.+-
T Consensus 29 ~dy~Cp~C~~~-~-~~-~~~l~~~~~~~~~~ 56 (184)
T 4dvc_A 29 FSFYCPHCNTF-E-PI-IAQLKQQLPEGAKF 56 (184)
T ss_dssp ECTTCHHHHHH-H-HH-HHHHHHTSCTTCEE
T ss_pred ECCCCHhHHHH-h-HH-HHHHHhhcCCceEE
Confidence 47999999763 2 11 22344555544443
No 326
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=29.97 E-value=19 Score=26.25 Aligned_cols=14 Identities=14% Similarity=0.591 Sum_probs=10.4
Q ss_pred ceecCCCCcccccH
Q 028989 43 AMFLCPFCAEDFDI 56 (200)
Q Consensus 43 ~~F~CPfC~e~fD~ 56 (200)
..-.||||+.-|-.
T Consensus 52 g~~~CpYCg~~f~l 65 (80)
T 2jvm_A 52 GFVECGYCDRRYIH 65 (80)
T ss_dssp CEEECSSSSCEEEE
T ss_pred CeEECCCCCCEEEe
Confidence 46789999986433
No 327
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=29.86 E-value=17 Score=26.44 Aligned_cols=14 Identities=36% Similarity=0.859 Sum_probs=11.8
Q ss_pred CCccceecCCCCcc
Q 028989 39 DDLNAMFLCPFCAE 52 (200)
Q Consensus 39 ~d~r~~F~CPfC~e 52 (200)
+|++..|.||.|+.
T Consensus 55 edlPddW~CPvCga 68 (81)
T 2kn9_A 55 DDIPDDWSCPDCGA 68 (81)
T ss_dssp TTSCTTCCCTTTCC
T ss_pred hHCCCCCcCCCCCC
Confidence 46788899999997
No 328
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=29.61 E-value=16 Score=25.74 Aligned_cols=12 Identities=25% Similarity=0.966 Sum_probs=9.3
Q ss_pred ceecCCCCcccc
Q 028989 43 AMFLCPFCAEDF 54 (200)
Q Consensus 43 ~~F~CPfC~e~f 54 (200)
....||||+.-|
T Consensus 39 g~~~CpYCg~~f 50 (67)
T 2jrr_A 39 GWVECPYCDCKY 50 (67)
T ss_dssp SEEEETTTTEEE
T ss_pred CeEECCCCCCEE
Confidence 457899999854
No 329
>3vhs_A ATPase wrnip1; zinc finger, ubiquitin-binding domain, ubiquitin binding, ME binding protein; 1.90A {Homo sapiens}
Probab=29.40 E-value=24 Score=21.03 Aligned_cols=19 Identities=37% Similarity=0.760 Sum_probs=11.2
Q ss_pred cccccccccccc-hhhhhhh
Q 028989 73 NGVCPVCAKRVG-TDIVSHI 91 (200)
Q Consensus 73 ~vVCPICa~~v~-~d~v~Hl 91 (200)
.|-||||-.+.. ..+-.|+
T Consensus 6 ~vqcpvcqq~mpaahin~hl 25 (29)
T 3vhs_A 6 QVQCPVCQQMMPAAHINSHL 25 (29)
T ss_dssp EEECTTTCCEEEGGGHHHHH
T ss_pred eeeChHHHHhCcHHHHHHHH
Confidence 367999987643 3333443
No 330
>2yre_A F-box only protein 30; zinc binding, E3 ubiquitin ligase, SCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.67 E-value=44 Score=25.20 Aligned_cols=45 Identities=18% Similarity=0.299 Sum_probs=29.9
Q ss_pred eecCC-CCcccccHHHHHhhhhhcCCCCCCcccccc----cccccc-hhhhhhh
Q 028989 44 MFLCP-FCAEDFDIVGLCCHIDEDHPIEAKNGVCPV----CAKRVG-TDIVSHI 91 (200)
Q Consensus 44 ~F~CP-fC~e~fD~~~Lc~H~~~eH~~e~k~vVCPI----Ca~~v~-~d~v~Hl 91 (200)
--+|| .|+..|-.-.|-+|+.. +-.+. +.|+- |..++. .+|..|+
T Consensus 37 ~i~CP~~Cga~i~rckL~EH~~~--CP~a~-v~C~~~~yGCp~~~~R~~L~~He 87 (100)
T 2yre_A 37 LIGCPLVCGAVFHSCKADEHRLL--CPFER-VPCLNSDFGCPFTMARNKVAEHL 87 (100)
T ss_dssp EEECTTCCSCEEEHHHHHHHHHH--CSSSE-EECTTTTTTCCCEEESSTHHHHH
T ss_pred eeeCCcccCCeeehhhHHHHHhh--ccccc-ccccccCcCCceeecHHHHHHHH
Confidence 45699 79999999999999965 33332 45553 444432 4677776
No 331
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=28.35 E-value=20 Score=24.97 Aligned_cols=33 Identities=6% Similarity=0.174 Sum_probs=21.1
Q ss_pred CCccceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
..+-....||.|...+.... +....+||-|...
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (68)
T 2jr6_A 3 KKFLDILVCPVTKGRLEYHQ-----------DKQELWSRQAKLA 35 (68)
T ss_dssp CSSSCCCBCSSSCCBCEEET-----------TTTEEEETTTTEE
T ss_pred hHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 34556779999987644321 2245789988654
No 332
>2bai_A Genome polyprotein; zinc finger domain, viruses, cardiovirus, structural genomics, PSI, protein structure initiative; NMR {Mengo virus} SCOP: g.87.1.1
Probab=27.76 E-value=7.5 Score=23.91 Aligned_cols=9 Identities=33% Similarity=0.914 Sum_probs=7.4
Q ss_pred ccccccccc
Q 028989 74 GVCPVCAKR 82 (200)
Q Consensus 74 vVCPICa~~ 82 (200)
-+||+|.+.
T Consensus 17 ~~CP~CtA~ 25 (32)
T 2bai_A 17 EECPKCSAL 25 (32)
T ss_dssp GGHHHHHCS
T ss_pred cccccccee
Confidence 589999875
No 333
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=27.37 E-value=18 Score=24.34 Aligned_cols=14 Identities=29% Similarity=0.952 Sum_probs=11.9
Q ss_pred CccceecCCCCccc
Q 028989 40 DLNAMFLCPFCAED 53 (200)
Q Consensus 40 d~r~~F~CPfC~e~ 53 (200)
|++..+.||-|+..
T Consensus 32 ~lP~dw~CP~Cg~~ 45 (54)
T 4rxn_A 32 DIPDDWVCPLCGVG 45 (54)
T ss_dssp GSCTTCBCTTTCCB
T ss_pred HCCCCCcCcCCCCc
Confidence 67888999999973
No 334
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=27.34 E-value=3.9 Score=30.35 Aligned_cols=10 Identities=30% Similarity=0.773 Sum_probs=7.7
Q ss_pred cccccccccc
Q 028989 73 NGVCPVCAKR 82 (200)
Q Consensus 73 ~vVCPICa~~ 82 (200)
+..||+|...
T Consensus 89 ~~~CP~Cr~~ 98 (106)
T 3dpl_R 89 RQVCPLDNRE 98 (106)
T ss_dssp CSBCSSSCSB
T ss_pred CCcCcCCCCc
Confidence 4679999875
No 335
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.21 E-value=2 Score=29.78 Aligned_cols=11 Identities=27% Similarity=0.785 Sum_probs=8.2
Q ss_pred ccccccccccc
Q 028989 74 GVCPVCAKRVG 84 (200)
Q Consensus 74 vVCPICa~~v~ 84 (200)
..||+|...+.
T Consensus 65 ~~CP~CR~~~~ 75 (81)
T 2ecl_A 65 NRCPLCQQDWV 75 (81)
T ss_dssp CBCTTTCCBCC
T ss_pred CCCCCcCCCcc
Confidence 48999987643
No 336
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=27.00 E-value=33 Score=23.80 Aligned_cols=45 Identities=13% Similarity=0.258 Sum_probs=27.8
Q ss_pred eecCCCCccc-ccHHHHHhhhhhcCCCCCCcccccccccccchhhhhhhh
Q 028989 44 MFLCPFCAED-FDIVGLCCHIDEDHPIEAKNGVCPVCAKRVGTDIVSHIT 92 (200)
Q Consensus 44 ~F~CPfC~e~-fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~~d~v~Hlt 92 (200)
.|.|+.|++. -....|..|+.. |.. .++-.|..|.. ..+++.|..
T Consensus 25 py~C~~C~k~F~~~~~L~~H~~~-Ht~-ekp~~C~~~~~--~~~~~~~~~ 70 (88)
T 1x6f_A 25 TYQCKHCDSKLQSTAELTSHLNI-HNE-EFQKRAKRQER--RKQLLSKQK 70 (88)
T ss_dssp CEECSSSCCEESSHHHHHHHHHH-HHH-HHHHHCCCCSC--CCCCCCCCC
T ss_pred CCcCCCCCCEeCCHHHHHHHHHH-hCC-CCCcccchhhh--HHHHHhhhc
Confidence 5999999997 455778888765 322 24456766543 234444443
No 337
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=26.86 E-value=20 Score=24.96 Aligned_cols=33 Identities=12% Similarity=0.338 Sum_probs=21.5
Q ss_pred CCccceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
..+-....||.|...+.... +....+||-|...
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (68)
T 2hf1_A 3 AKFLEILVCPLCKGPLVFDK-----------SKDELICKGDRLA 35 (68)
T ss_dssp CCCEEECBCTTTCCBCEEET-----------TTTEEEETTTTEE
T ss_pred hHHhhheECCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 34556789999987644321 1345789998664
No 338
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=26.84 E-value=33 Score=26.42 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=25.0
Q ss_pred CCCCccccccccccc--chhhhhhhhhhccchh
Q 028989 69 IEAKNGVCPVCAKRV--GTDIVSHITMQHGNFF 99 (200)
Q Consensus 69 ~e~k~vVCPICa~~v--~~d~v~Hlt~qH~~~~ 99 (200)
.+..+++|-.|.... ...+++|+..+|+--|
T Consensus 11 ~e~~~~~CLFCd~~~~s~~~~l~H~k~~H~FD~ 43 (121)
T 1wir_A 11 HGRQHTPCLFCDRLFASAEETFSHCKLEHQFNI 43 (121)
T ss_dssp CCCCCEECSSSCCEESSHHHHHHHHHHSSCCCH
T ss_pred CCCCceeEecCCCcccCHHHHHHHHHHhcCCCH
Confidence 345679999999874 4699999999999744
No 339
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=26.53 E-value=21 Score=24.97 Aligned_cols=33 Identities=18% Similarity=0.436 Sum_probs=21.0
Q ss_pred CCccceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
..+-....||.|...+.... +....+||-|...
T Consensus 3 ~~LL~iL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (70)
T 2js4_A 3 SRLLDILVCPVCKGRLEFQR-----------AQAELVCNADRLA 35 (70)
T ss_dssp CCCCCCCBCTTTCCBEEEET-----------TTTEEEETTTTEE
T ss_pred hHHhhheECCCCCCcCEEeC-----------CCCEEEcCCCCce
Confidence 34556779999988644321 1345789988654
No 340
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=25.30 E-value=7.2 Score=29.77 Aligned_cols=53 Identities=21% Similarity=0.364 Sum_probs=32.3
Q ss_pred ecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccccc-------hhhhhhhhhhccchhhh
Q 028989 45 FLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKRVG-------TDIVSHITMQHGNFFKI 101 (200)
Q Consensus 45 F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~v~-------~d~v~Hlt~qH~~~~K~ 101 (200)
-.||-|..+++..+=.-||+.=+..=.+.+.||-|...+- .|+. =||++.+|.
T Consensus 33 ~~CP~Cq~eL~~~g~~~hC~~C~~~f~~~a~CPdC~q~LevLkACGAvdYF----C~~chgLiS 92 (101)
T 2jne_A 33 LHCPQCQHVLDQDNGHARCRSCGEFIEMKALCPDCHQPLQVLKACGAVDYF----CQHGHGLIS 92 (101)
T ss_dssp CBCSSSCSBEEEETTEEEETTTCCEEEEEEECTTTCSBCEEEEETTEEEEE----ETTTTEEEC
T ss_pred ccCccCCCcceecCCEEECccccchhhccccCcchhhHHHHHHHhcCcchh----hccCCceee
Confidence 4788888776554433334333333345678999998742 3543 367777774
No 341
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=24.21 E-value=27 Score=31.15 Aligned_cols=33 Identities=24% Similarity=0.582 Sum_probs=22.4
Q ss_pred ceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc-cchhhh
Q 028989 43 AMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR-VGTDIV 88 (200)
Q Consensus 43 ~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~-v~~d~v 88 (200)
+.-.||||+..+.. +-+.-+||||-.- ||.+-+
T Consensus 277 ~~v~Cp~cgA~y~~-------------~~kG~lC~vC~l~~IG~~~~ 310 (320)
T 3mkr_B 277 PVEKCPLSGACYSP-------------EFKGQICKVTTVTEIGKDVI 310 (320)
T ss_dssp CCEECTTTCCEECG-------------GGTTSBCTTTSSBBSSCCCC
T ss_pred CCccCCCCCCeech-------------hhCCCCCCCCcCcccCCccc
Confidence 35699999986532 1245699999864 776654
No 342
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=23.76 E-value=35 Score=25.17 Aligned_cols=31 Identities=19% Similarity=0.367 Sum_probs=23.0
Q ss_pred CCCCCcccccccccccchhhhhhhhhhccchh
Q 028989 68 PIEAKNGVCPVCAKRVGTDIVSHITMQHGNFF 99 (200)
Q Consensus 68 ~~e~k~vVCPICa~~v~~d~v~Hlt~qH~~~~ 99 (200)
......+||.+|..... .+-.||+..||.--
T Consensus 16 si~~d~iiClecGK~fK-~LkRHL~~~hgltp 46 (87)
T 2jsp_A 16 SVQDDHIVCLECGGSFK-SLKRHLTTHHSMTP 46 (87)
T ss_dssp TBCSSCEECTBTCCEES-BHHHHHHHTTCSCH
T ss_pred ccCCCceEecccchhhH-HHHHHHHHccCCCH
Confidence 34556678999998755 46699998888754
No 343
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=23.49 E-value=23 Score=24.76 Aligned_cols=33 Identities=12% Similarity=0.360 Sum_probs=21.2
Q ss_pred CCccceecCCCCcccccHHHHHhhhhhcCCCCCCcccccccccc
Q 028989 39 DDLNAMFLCPFCAEDFDIVGLCCHIDEDHPIEAKNGVCPVCAKR 82 (200)
Q Consensus 39 ~d~r~~F~CPfC~e~fD~~~Lc~H~~~eH~~e~k~vVCPICa~~ 82 (200)
..+-....||.|...+.... +....+||-|...
T Consensus 3 ~~LLeiL~CP~ck~~L~~~~-----------~~~~LiC~~cg~~ 35 (69)
T 2pk7_A 3 TKLLDILACPICKGPLKLSA-----------DKTELISKGAGLA 35 (69)
T ss_dssp CCGGGTCCCTTTCCCCEECT-----------TSSEEEETTTTEE
T ss_pred hHHHhheeCCCCCCcCeEeC-----------CCCEEEcCCCCcE
Confidence 34556779999987644311 1345789998664
No 344
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.45 E-value=12 Score=25.21 Aligned_cols=40 Identities=28% Similarity=0.513 Sum_probs=24.9
Q ss_pred CccceecCCCCcccc-cHHH-------HHhhhhhcCCCCCCcccccccccccch
Q 028989 40 DLNAMFLCPFCAEDF-DIVG-------LCCHIDEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 40 d~r~~F~CPfC~e~f-D~~~-------Lc~H~~~eH~~e~k~vVCPICa~~v~~ 85 (200)
+......||.|.+.+ +.+. +|..|.. +...||+|...+..
T Consensus 21 ~~~~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~------~~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 21 RLQEEKLCKICMDRNIAIVFVPCGHLVTCKQCAE------AVDKCPMCYTVITF 68 (75)
T ss_dssp HHHHHHSCSSSCSSCCCBCCSSSCCCCBCHHHHH------HCSBCTTTCCBCCC
T ss_pred cCCCCCCCCcCCCCCCCEEEecCCCHHHHHHHhh------CCCCCccCCceecC
Confidence 345678999998863 3332 2333332 23589999988754
No 345
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=23.15 E-value=39 Score=19.75 Aligned_cols=6 Identities=67% Similarity=0.911 Sum_probs=2.7
Q ss_pred hhhhhh
Q 028989 86 DIVSHI 91 (200)
Q Consensus 86 d~v~Hl 91 (200)
++..|+
T Consensus 35 ~L~~H~ 40 (47)
T 1ncs_A 35 NIRSHI 40 (47)
T ss_dssp SHHHHH
T ss_pred HHHHHH
Confidence 444444
No 346
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=23.14 E-value=39 Score=25.60 Aligned_cols=26 Identities=19% Similarity=0.474 Sum_probs=19.3
Q ss_pred CccceecCCCCcccccHHHHHhhhhh
Q 028989 40 DLNAMFLCPFCAEDFDIVGLCCHIDE 65 (200)
Q Consensus 40 d~r~~F~CPfC~e~fD~~~Lc~H~~~ 65 (200)
+...+|.||-|+..+--.-..-|++.
T Consensus 66 ~~s~~~~C~nC~R~vaa~RFApHLeK 91 (99)
T 3mhs_C 66 ESSQYIHCENCGRDVSANRLAAHLQR 91 (99)
T ss_dssp TTSCEEECTTTCCEEEGGGHHHHHHH
T ss_pred cCCCeEECCCCCCCchhhhhHHHHHH
Confidence 45568888888888777777777753
No 347
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=22.91 E-value=23 Score=26.03 Aligned_cols=14 Identities=29% Similarity=0.826 Sum_probs=11.6
Q ss_pred CCccceecCCCCcc
Q 028989 39 DDLNAMFLCPFCAE 52 (200)
Q Consensus 39 ~d~r~~F~CPfC~e 52 (200)
+|++..|.||.|+.
T Consensus 63 edlPddW~CPvCga 76 (87)
T 1s24_A 63 EDIPDDWCCPDCGA 76 (87)
T ss_dssp GGCCTTCCCSSSCC
T ss_pred hHCCCCCCCCCCCC
Confidence 36778899999997
No 348
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=21.95 E-value=9.6 Score=33.86 Aligned_cols=43 Identities=19% Similarity=0.459 Sum_probs=27.1
Q ss_pred cceecCCCCccc-ccHHHH-Hhhh-hhcCCCCCCcccccccccccch
Q 028989 42 NAMFLCPFCAED-FDIVGL-CCHI-DEDHPIEAKNGVCPVCAKRVGT 85 (200)
Q Consensus 42 r~~F~CPfC~e~-fD~~~L-c~H~-~~eH~~e~k~vVCPICa~~v~~ 85 (200)
...+.||.|.+. .+.+.| |-|. -=..|... ...||+|...+..
T Consensus 293 ~~~~~C~IC~~~~~~~v~lpCgH~~fC~~C~~~-~~~CP~CR~~i~~ 338 (345)
T 3t6p_A 293 QEERTCKVCMDKEVSVVFIPCGHLVVCQECAPS-LRKCPICRGIIKG 338 (345)
T ss_dssp HTTCBCTTTSSSBCCEEEETTCCEEECTTTGGG-CSBCTTTCCBCCE
T ss_pred cCCCCCCccCCcCCceEEcCCCChhHhHHHHhc-CCcCCCCCCCccC
Confidence 356899999986 444443 5565 22233222 2689999988653
No 349
>2j9u_B VPS36, vacuolar protein sorting-associated protein 36; zinc-finger, metal-binding, protein transport; 2.00A {Saccharomyces cerevisiae} SCOP: g.41.11.1
Probab=21.61 E-value=23 Score=25.66 Aligned_cols=9 Identities=44% Similarity=1.128 Sum_probs=7.4
Q ss_pred ccccccccc
Q 028989 74 GVCPVCAKR 82 (200)
Q Consensus 74 vVCPICa~~ 82 (200)
-|||||...
T Consensus 18 WVCpICsfs 26 (76)
T 2j9u_B 18 WVCPICMVS 26 (76)
T ss_dssp EECTTTCCE
T ss_pred eECcccccc
Confidence 489999865
No 350
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.21 E-value=65 Score=22.51 Aligned_cols=32 Identities=19% Similarity=0.580 Sum_probs=19.4
Q ss_pred CcccccHHHHHhhhhhcCCCCCCcccccc--cccc
Q 028989 50 CAEDFDIVGLCCHIDEDHPIEAKNGVCPV--CAKR 82 (200)
Q Consensus 50 C~e~fD~~~Lc~H~~~eH~~e~k~vVCPI--Ca~~ 82 (200)
|+-.|+...+..++...+. ..+...||+ |...
T Consensus 26 cGh~f~r~cI~~~l~~~~~-~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 26 CGHTYEEDAIVRMIESRQK-RKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCEEEHHHHHHHHHHHHT-TTCCBCCCSTTCCCC
T ss_pred CCCeecHHHHHHHHHHccC-cCCCCCCCcCcCccc
Confidence 4444566666667765431 123568999 9855
No 351
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=21.21 E-value=9.9 Score=29.95 Aligned_cols=21 Identities=24% Similarity=0.447 Sum_probs=13.8
Q ss_pred ccceecCCCCccc-ccHHHHHh
Q 028989 41 LNAMFLCPFCAED-FDIVGLCC 61 (200)
Q Consensus 41 ~r~~F~CPfC~e~-fD~~~Lc~ 61 (200)
.-..|.||||..- -.+..+..
T Consensus 20 ~f~D~~Cp~C~~~~~~~~~~l~ 41 (182)
T 3gn3_A 20 VFLEPTCPFSVKAFFKLDDLLA 41 (182)
T ss_dssp EEECTTCHHHHHHHTTHHHHHH
T ss_pred EEECCCCHhHHHHHHHHHHHHH
Confidence 3457999999973 44445443
No 352
>2l8e_A Polyhomeotic-like protein 1; DNA binding protein; NMR {Homo sapiens}
Probab=20.62 E-value=35 Score=22.45 Aligned_cols=14 Identities=14% Similarity=0.598 Sum_probs=9.7
Q ss_pred ceecCCCCcccccH
Q 028989 43 AMFLCPFCAEDFDI 56 (200)
Q Consensus 43 ~~F~CPfC~e~fD~ 56 (200)
..-.|++|++.+-.
T Consensus 17 ~~~~C~~CG~~i~~ 30 (49)
T 2l8e_A 17 NLLKCEYCGKYAPA 30 (49)
T ss_dssp SEEECTTTCCEEEG
T ss_pred CCCcChhccCcccc
Confidence 34569999987543
Done!