BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028990
MGTPVTAPWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQIN
SDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCS
MKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFM
SRLSDNGEKYWASLKTSPEC

High Scoring Gene Products

Symbol, full name Information P value
orf19.5136 gene_product from Candida albicans 5.3e-08
YGR017W
Putative protein of unknown function
gene from Saccharomyces cerevisiae 7.6e-05
PNPO
Pyridoxine-5'-phosphate oxidase
protein from Homo sapiens 0.00038

The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028990
        (200 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2039949 - symbol:AT2G46580 species:3702 "Arabi...   669  9.4e-66   1
CGD|CAL0002553 - symbol:orf19.5136 species:5476 "Candida ...   125  5.3e-08   2
SGD|S000003249 - symbol:YGR017W "Putative protein of unkn...    99  7.6e-05   2
UNIPROTKB|J3QQV6 - symbol:PNPO "Pyridoxine-5'-phosphate o...    91  0.00038   1


>TAIR|locus:2039949 [details] [associations]
            symbol:AT2G46580 species:3702 "Arabidopsis thaliana"
            [GO:0004733 "pyridoxamine-phosphate oxidase activity" evidence=IEA]
            [GO:0008615 "pyridoxine biosynthetic process" evidence=IEA]
            [GO:0010181 "FMN binding" evidence=IEA] [GO:0016491 "oxidoreductase
            activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
            evidence=IEA] InterPro:IPR000659 InterPro:IPR012349
            InterPro:IPR024624 Pfam:PF12766 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC006418 GO:GO:0010181 GO:GO:0009443
            Gene3D:2.30.110.10 SUPFAM:SSF50475 GO:GO:0008615
            UniPathway:UPA00190 GO:GO:0004733 PANTHER:PTHR10851 EMBL:AY086412
            EMBL:BT024917 IPI:IPI00540909 PIR:F84904 RefSeq:NP_566081.1
            UniGene:At.21431 ProteinModelPortal:Q9ZPY1 SMR:Q9ZPY1 PRIDE:Q9ZPY1
            EnsemblPlants:AT2G46580.1 GeneID:819270 KEGG:ath:AT2G46580
            TAIR:At2g46580 eggNOG:COG5135 HOGENOM:HOG000233130
            InParanoid:Q9ZPY1 OMA:ALHRNRS PhylomeDB:Q9ZPY1
            ProtClustDB:CLSN2688969 Genevestigator:Q9ZPY1 InterPro:IPR024015
            TIGRFAMs:TIGR04026 Uniprot:Q9ZPY1
        Length = 198

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 123/199 (61%), Positives = 157/199 (78%)

Query:     1 MGTPVTAPWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQIN 60
             MGT V APWKQLL  A+E+ SHL HS Y QLAT+G NGRPSNRTVVFRGF++N+D+IQIN
Sbjct:     1 MGTHV-APWKQLLFGAIEANSHLSHSSYVQLATIGLNGRPSNRTVVFRGFEENSDRIQIN 59

Query:    61 SDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCS 120
             +D RSRKIEELK CPFSE+CWYF+++W+QFRINGR++VID SN D  KLQ REK+WF  S
Sbjct:    60 TDLRSRKIEELKHCPFSEMCWYFSDTWEQFRINGRIEVIDASNPDQTKLQQREKAWFANS 119

Query:   121 MKARLQYLDPEQGCPSVNEQP-KEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKF 179
             +++RL Y+ P  G P  +EQ  ++  LDP +GPV  +C+L+L+P++VDYLNLK+NQ+L F
Sbjct:   120 LRSRLIYVCPTPGSPCNSEQSSQQVKLDPSSGPVPEYCLLLLEPEKVDYLNLKTNQRLFF 179

Query:   180 MSRLSDNGEKYWASLKTSP 198
              S  +  GEK W S K +P
Sbjct:   180 SSMATGTGEKCWTSEKVNP 198


>CGD|CAL0002553 [details] [associations]
            symbol:orf19.5136 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR012349 InterPro:IPR024624 Pfam:PF12766 CGD:CAL0002553
            GO:GO:0016491 GO:GO:0010181 Gene3D:2.30.110.10 SUPFAM:SSF50475
            EMBL:AACQ01000061 EMBL:AACQ01000060 eggNOG:COG5135
            RefSeq:XP_716891.1 RefSeq:XP_716959.1 RefSeq:XP_888927.1
            ProteinModelPortal:Q5A5E6 GeneID:3641342 GeneID:3641466
            GeneID:3704167 KEGG:cal:CaO19.12601 KEGG:cal:CaO19.5136
            KEGG:cal:CaO19_5136 Uniprot:Q5A5E6
        Length = 228

 Score = 125 (49.1 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
 Identities = 36/105 (34%), Positives = 52/105 (49%)

Query:     3 TPVTAPWKQLLLQALESQSHLKHSIYFQLATVGTN-GRPSNRTVVFRGFQ-DNTDK--IQ 58
             +P  AP+ + +   L    +      FQLAT+ +  G P NRT+V+RG+  DN D   + 
Sbjct:     8 SPWVAPFDESVKAELSVTKNDPPFTSFQLATIDSETGYPQNRTLVYRGWLFDNKDSSVLT 67

Query:    59 INSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSN 103
               +D R  K +EL      E  +YF+    QFR+  R  VID  N
Sbjct:    68 FATDKRMSKYKELLHNDKCEAVFYFSRIKKQFRLRARARVIDEQN 112

 Score = 43 (20.2 bits), Expect = 5.3e-08, Sum P(2) = 5.3e-08
 Identities = 12/43 (27%), Positives = 24/43 (55%)

Query:   156 FCVLILDPDQVDYLNLKSNQKLKFMSRLSDNGEKYWASLKTSP 198
             F ++ L  D VDY +L+ +++  F+ +L +N +  W   +  P
Sbjct:   190 FALVGLFIDYVDYYDLEKDKR--FIYQLDENHQ--WFEQEVCP 228


>SGD|S000003249 [details] [associations]
            symbol:YGR017W "Putative protein of unknown function"
            species:4932 "Saccharomyces cerevisiae" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0016491
            "oxidoreductase activity" evidence=IEA] [GO:0010181 "FMN binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR012349 InterPro:IPR024624 Pfam:PF12766 SGD:S000003249
            GO:GO:0005634 GO:GO:0005737 EMBL:BK006941 GO:GO:0016491
            GO:GO:0010181 Gene3D:2.30.110.10 SUPFAM:SSF50475 eggNOG:COG5135
            EMBL:Z72802 PIR:S64308 RefSeq:NP_011531.1 ProteinModelPortal:P53210
            DIP:DIP-1860N IntAct:P53210 MINT:MINT-409003 STRING:P53210
            PaxDb:P53210 EnsemblFungi:YGR017W GeneID:852900 KEGG:sce:YGR017W
            CYGD:YGR017w HOGENOM:HOG000248042 OMA:WEEQEVC OrthoDB:EOG4DJP5S
            NextBio:972580 Genevestigator:P53210 GermOnline:YGR017W
            Uniprot:P53210
        Length = 297

 Score = 99 (39.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
 Identities = 31/105 (29%), Positives = 46/105 (43%)

Query:     7 APWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVV--FRGFQDNTDKIQINSDTR 64
             APW  + +Q+ ++ +    S  F      TN       V   F      T+ +  N+D R
Sbjct:     6 APWIPMFIQSCKNNTEPFVSFQFATVDELTNKPRCRTVVFRDFLFHDKRTNVLTFNTDMR 65

Query:    65 SRKIEEL------------KSC--PFSEICWYFTESWDQFRINGR 95
             S KI E             K C  PF E C+YF E+W+Q+R +G+
Sbjct:    66 SSKITESFITPNSNNSSDSKRCETPFFEACFYFPETWEQYRFSGQ 110

 Score = 53 (23.7 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
 Identities = 23/95 (24%), Positives = 40/95 (42%)

Query:   114 KSWFGCSMKARLQYLDPEQGCPSVNEQPKEFS-----LDPC---AGPVDAFCVLILDPDQ 165
             + W   S   +  Y  P  G    +E  K+       +D     AG ++ F ++ L  D 
Sbjct:   204 RQWSSLSRHTKSLYRKPAPGQKLTSETSKQLDKLHRGVDGAKEDAG-LENFGIVCLCVDS 262

Query:   166 VDYLNLKSNQK-LKFMSRLSDN-GEKYWASLKTSP 198
             VD+LNLK  +   +++ + +D   E  W   +  P
Sbjct:   263 VDFLNLKEGRGGERWIFQKTDGKDEDLWEEQEVCP 297


>UNIPROTKB|J3QQV6 [details] [associations]
            symbol:PNPO "Pyridoxine-5'-phosphate oxidase" species:9606
            "Homo sapiens" [GO:0008615 "pyridoxine biosynthetic process"
            evidence=IEA] [GO:0010181 "FMN binding" evidence=IEA] [GO:0004733
            "pyridoxamine-phosphate oxidase activity" evidence=IEA]
            InterPro:IPR000659 InterPro:IPR011576 InterPro:IPR012349
            Pfam:PF01243 GO:GO:0010181 GO:GO:0042823 Gene3D:2.30.110.10
            SUPFAM:SSF50475 GO:GO:0008615 GO:GO:0004733 PANTHER:PTHR10851
            TIGRFAMs:TIGR00558 HGNC:HGNC:30260 ChiTaRS:PNPO EMBL:AC018521
            Ensembl:ENST00000583599 Uniprot:J3QQV6
        Length = 120

 Score = 91 (37.1 bits), Expect = 0.00038, P = 0.00038
 Identities = 23/66 (34%), Positives = 37/66 (56%)

Query:    31 LATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQF 90
             LAT   +G+PS R ++ +GF    D  +  ++  SRK +EL S PF+ + +Y+     Q 
Sbjct:     3 LATCTRDGKPSARMLLLKGF--GKDGFRFFTNFESRKGKELDSNPFASLVFYWEPLNRQV 60

Query:    91 RINGRV 96
             R+ G V
Sbjct:    61 RVEGPV 66


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      200       200   0.00087  111 3  11 22  0.36    33
                                                     31  0.45    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  609 (65 KB)
  Total size of DFA:  191 KB (2108 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.81u 0.16s 17.97t   Elapsed:  00:00:01
  Total cpu time:  17.81u 0.16s 17.97t   Elapsed:  00:00:01
  Start:  Fri May 10 01:35:29 2013   End:  Fri May 10 01:35:30 2013

Back to top