Query 028990
Match_columns 200
No_of_seqs 155 out of 1339
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 09:00:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028990.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028990hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i51_A Uncharacterized conserv 100.0 1.1E-42 3.8E-47 279.0 23.0 189 5-198 3-195 (195)
2 1dnl_A Pyridoxine 5'-phosphate 100.0 1.5E-39 5.1E-44 261.6 14.6 178 4-198 11-199 (199)
3 1ci0_A Protein (PNP oxidase); 100.0 3.5E-39 1.2E-43 264.0 13.2 178 5-198 35-228 (228)
4 1nrg_A Pyridoxine 5'-phosphate 100.0 8.7E-38 3E-42 259.9 14.4 183 5-198 58-261 (261)
5 1ty9_A Phenazine biosynthesis 100.0 8.5E-37 2.9E-41 249.2 14.0 176 6-198 38-222 (222)
6 2a2j_A Pyridoxamine 5'-phospha 100.0 1.3E-36 4.4E-41 250.6 13.0 171 7-199 63-245 (246)
7 2ou5_A Pyridoxamine 5'-phospha 100.0 8.5E-36 2.9E-40 235.2 17.1 161 7-198 13-175 (175)
8 3dmb_A Putative general stress 99.9 9.4E-23 3.2E-27 155.9 9.9 117 25-172 18-134 (147)
9 2re7_A Uncharacterized protein 99.9 1.6E-22 5.5E-27 151.3 7.9 117 25-171 17-133 (134)
10 2i02_A General stress protein 99.9 3E-21 1E-25 146.7 12.6 119 23-172 19-138 (148)
11 2qea_A Putative general stress 99.9 7.7E-22 2.6E-26 152.8 8.1 122 24-179 14-138 (160)
12 2hhz_A Pyridoxamine 5'-phospha 99.8 1.8E-20 6.3E-25 143.0 14.4 126 25-182 13-140 (150)
13 2ig6_A NIMC/NIMA family protei 99.8 6E-21 2.1E-25 146.4 10.6 115 25-173 29-143 (150)
14 3u35_A General stress protein; 99.8 9E-22 3.1E-26 155.8 6.0 124 25-179 37-162 (182)
15 2iab_A Hypothetical protein; N 99.8 1E-20 3.6E-25 145.7 10.4 122 25-180 23-147 (155)
16 3ec6_A General stress protein 99.8 1.4E-19 4.7E-24 136.5 12.4 114 25-173 14-130 (139)
17 2hq7_A Protein, related to gen 99.8 1.3E-19 4.4E-24 137.0 10.2 118 25-173 17-134 (146)
18 3db0_A LIN2891 protein; putati 99.8 2.8E-19 9.4E-24 132.7 9.2 111 25-170 16-127 (128)
19 2fhq_A Putative general stress 99.8 1.4E-17 4.7E-22 125.0 14.8 114 25-171 19-132 (141)
20 3ba3_A Protein LP_0091, pyrido 99.7 3.6E-17 1.2E-21 124.7 8.4 120 25-173 13-136 (145)
21 1vl7_A Hypothetical protein AL 99.7 9E-16 3.1E-20 117.9 13.2 77 24-102 28-111 (157)
22 2asf_A Hypothetical protein RV 99.6 1.7E-15 5.9E-20 113.6 12.3 114 23-170 18-131 (137)
23 3f7e_A Pyridoxamine 5'-phospha 99.6 9.6E-15 3.3E-19 108.6 13.0 76 25-103 14-90 (131)
24 2aq6_A Pyridoxine 5'-phosphate 99.6 8.9E-14 3E-18 104.8 15.4 77 25-102 16-92 (147)
25 2htd_A Predicted flavin-nucleo 99.6 2.3E-14 7.7E-19 108.4 11.8 74 27-102 39-113 (140)
26 1rfe_A Hypothetical protein RV 99.6 2.3E-14 7.9E-19 109.8 11.4 122 26-171 22-146 (162)
27 2q9k_A Uncharacterized protein 99.5 6.5E-14 2.2E-18 107.4 11.3 76 24-103 19-96 (151)
28 3tgv_A Heme-binding protein HU 99.4 2.8E-12 9.7E-17 97.7 12.9 76 25-103 13-95 (148)
29 3cp3_A Uncharacterized protein 99.4 6.8E-12 2.3E-16 95.2 11.8 110 25-171 26-139 (148)
30 2arz_A Hypothetical protein PA 99.4 4.2E-12 1.4E-16 104.1 10.9 115 26-171 19-140 (247)
31 3swj_A CHUZ, putative uncharac 99.2 4.7E-10 1.6E-14 92.6 16.6 119 25-171 97-223 (251)
32 2hq9_A MLL6688 protein; struct 99.2 8.7E-11 3E-15 88.9 9.6 73 26-103 19-94 (149)
33 2hti_A BH0577 protein; structu 99.2 1.4E-10 4.8E-15 91.1 11.1 73 26-102 25-110 (185)
34 2fg9_A 5-nitroimidazole antibi 99.2 1.2E-10 4.2E-15 91.0 10.6 74 26-102 38-126 (178)
35 1xhn_A CREG, cellular represso 99.1 1.8E-10 6.2E-15 90.5 8.8 116 26-171 30-166 (184)
36 3dnh_A Uncharacterized protein 99.0 4.3E-10 1.5E-14 93.1 8.0 116 25-171 38-159 (258)
37 3u5w_A Putative uncharacterize 99.0 7.4E-10 2.5E-14 84.2 7.9 73 26-103 22-97 (148)
38 3gas_A Heme oxygenase; FMN-bin 99.0 1.8E-08 6E-13 83.5 16.7 119 25-171 97-223 (259)
39 3fkh_A Putative pyridoxamine 5 99.0 1.9E-09 6.6E-14 81.2 9.9 74 25-103 20-95 (138)
40 2fur_A Hypothetical protein; s 99.0 7.8E-10 2.7E-14 88.7 7.6 73 26-102 32-117 (209)
41 2vpa_A NIMA-related protein; c 98.9 3.6E-09 1.2E-13 85.4 8.6 76 25-102 54-146 (216)
42 3a6r_A FMN-binding protein; el 98.8 7.8E-09 2.7E-13 76.2 7.5 74 26-102 13-95 (122)
43 3in6_A FMN-binding protein; st 98.7 5.3E-08 1.8E-12 73.8 7.6 75 27-102 31-109 (148)
44 2ol5_A PAI 2 protein; structur 97.5 0.00051 1.7E-08 54.4 9.1 74 26-102 22-112 (202)
45 3r5l_A Deazaflavin-dependent n 96.7 0.0034 1.2E-07 45.8 5.9 71 25-104 14-90 (122)
46 3h96_A F420-H2 dependent reduc 93.9 0.097 3.3E-06 39.1 5.4 94 6-105 5-109 (143)
47 3r5y_A Putative uncharacterize 93.6 0.11 3.8E-06 38.9 5.2 90 7-105 15-115 (147)
48 3r5z_A Putative uncharacterize 93.0 0.18 6.2E-06 37.7 5.6 70 26-104 37-112 (145)
49 2ptf_A Uncharacterized protein 82.5 2.9 0.0001 33.4 6.3 54 28-83 37-90 (233)
50 3b5m_A Uncharacterized protein 80.0 2.8 9.4E-05 32.8 5.2 55 29-83 7-65 (205)
51 2iml_A Hypothetical protein; F 70.9 6.7 0.00023 30.4 5.2 55 26-82 14-69 (199)
52 1eje_A FMN-binding protein; st 69.6 14 0.00048 28.0 6.8 59 27-85 28-87 (192)
53 3e4v_A NADH:FMN oxidoreductase 69.3 15 0.0005 27.8 6.8 59 27-85 19-78 (186)
54 2nr4_A Conserved hypothetical 63.6 8.3 0.00029 30.2 4.4 51 29-83 32-82 (213)
55 3bpk_A Nitrilotriacetate monoo 62.3 18 0.00061 27.7 6.1 60 27-86 29-93 (206)
56 3fge_A Putative flavin reducta 60.0 12 0.00039 28.8 4.6 60 27-86 29-92 (203)
57 3rh7_A Hypothetical oxidoreduc 58.9 34 0.0012 28.4 7.6 59 27-85 31-90 (321)
58 2d5m_A Flavoredoxin; flavoprot 57.5 15 0.0005 27.8 4.8 59 27-85 15-74 (190)
59 1rz1_A Phenol 2-hydroxylase co 57.0 24 0.00082 25.8 5.8 58 27-85 16-74 (161)
60 1usc_A Putative styrene monoox 48.7 30 0.001 25.7 5.2 58 27-85 20-78 (178)
61 3pft_A Flavin reductase; desul 48.5 53 0.0018 23.9 6.5 58 27-85 17-75 (157)
62 2ecu_A Flavin reductase (HPAC) 48.0 44 0.0015 24.1 5.9 58 27-85 15-73 (149)
63 1yoa_A Putative flavoprotein; 47.5 39 0.0013 24.5 5.6 58 27-85 16-74 (159)
64 2r6v_A Uncharacterized protein 46.3 40 0.0014 25.5 5.7 56 28-84 31-87 (191)
65 3bnk_A Flavoredoxin; protein-F 45.5 45 0.0015 25.2 5.9 58 27-85 17-75 (196)
66 3cb0_A 4-hydroxyphenylacetate 39.1 59 0.002 24.0 5.5 57 27-84 29-86 (173)
67 1i0r_A Conserved hypothetical 38.6 80 0.0027 23.1 6.2 59 27-86 12-71 (169)
68 2r0x_A Possible flavin reducta 36.7 79 0.0027 22.8 5.8 58 27-85 18-76 (158)
69 2d37_A Hypothetical NADH-depen 34.9 81 0.0028 23.4 5.7 56 27-83 35-91 (176)
70 3adj_A F21M12.9 protein; HYL1, 33.7 86 0.0029 19.8 5.0 58 7-70 4-61 (76)
71 3hmz_A Flavin reductase domain 30.9 55 0.0019 24.9 4.2 57 27-84 30-87 (199)
72 3k86_A Chlorophenol-4-monooxyg 29.4 1E+02 0.0036 23.1 5.5 58 27-85 32-90 (185)
73 1ekz_A DSRBDIII, maternal effe 29.3 1.1E+02 0.0036 19.3 4.8 62 1-70 1-62 (76)
74 4hx6_A Oxidoreductase; structu 29.2 1.4E+02 0.0048 22.3 6.3 58 27-86 33-91 (185)
75 3nfw_A Flavin reductase-like, 27.6 95 0.0033 24.0 5.1 58 27-85 43-101 (210)
76 2qck_A Flavin reductase domain 26.0 1.2E+02 0.0041 22.2 5.3 58 27-85 23-81 (167)
77 1t4o_A Ribonuclease III; RNT1P 25.1 1E+02 0.0035 21.7 4.4 64 1-72 1-66 (117)
78 3adg_A F21M12.9 protein; HYL1, 24.0 1.4E+02 0.0046 18.6 6.0 56 8-70 4-60 (73)
No 1
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-42 Score=279.05 Aligned_cols=189 Identities=38% Similarity=0.682 Sum_probs=162.8
Q ss_pred CChhHHHHHHHHHHhcCCCCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEEC
Q 028990 5 VTAPWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFT 84 (200)
Q Consensus 5 ~~~~w~~~l~~~~~~~~~~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~ 84 (200)
..++|+.||+++++.+...+.+++|+|||+++||.|++|+|++++++++.++|+|+||.+|+|++||++||+|+|+|+++
T Consensus 3 ~~~~w~~wl~~a~~~~~~~p~~~~~~LATv~~dG~P~~R~v~~~~~d~~~~~l~F~T~~~S~K~~~l~~np~v~l~f~~~ 82 (195)
T 2i51_A 3 SLAPWRGAIAHALHRNRSLVYARYLQLATVQPNGRPANRTLVFRGFLEDTNQLRFITDTRSAKADQIQQQPWAEICWYFP 82 (195)
T ss_dssp CCCTTHHHHHHHHHHTTTCGGGGEEEEEEECTTSCEEEEEEECCCBCTTSSCEEEEEETTSHHHHHHHHCCEEEEEEEET
T ss_pred chhHHHHHHHHHHHhCCCCCCCCEEEEEEECCCCCeeEEEEEEEEEcCCCCeEEEEEcCCccHHHHHhhCCeEEEEEEeC
Confidence 34799999999998754444556999999999999999999999887643589999999999999999999999999999
Q ss_pred CCceEEEEEEEEEEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCC--CCCCCCCCCeEEEEEe
Q 028990 85 ESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSL--DPCAGPVDAFCVLILD 162 (200)
Q Consensus 85 ~~~~qiri~G~a~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~--~~~~~~~~~f~v~~i~ 162 (200)
...+||||+|+|+++++.+.+.||..++.++|.+.+..+|..|.++.||+++.+... .+.. ....+.+++|++|+|.
T Consensus 83 ~~~~qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg~~~~~~~~-~~~~~~~~~~p~p~~w~~~~v~ 161 (195)
T 2i51_A 83 NTREQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPGKPRIKESG-AFEPSPPDPIEPVPNFCLLLLD 161 (195)
T ss_dssp TTTEEEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTTSBCCCCGG-GGCCCCCCSSSCCTTEEEEEEE
T ss_pred CCCEEEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCCCCCCccchhH-HhhhhccCCCCCCCceEEEEEE
Confidence 999999999999999999999999999999999999999999988999999875432 2211 1122447999999999
Q ss_pred ecEEEeEecC--CCCeEEEEEccCCCCCCCceEEEeec
Q 028990 163 PDQVDYLNLK--SNQKLKFMSRLSDNGEKYWASLKTSP 198 (200)
Q Consensus 163 p~~ve~~~~~--~h~R~~f~~~~~~~~~~~W~~~~l~P 198 (200)
|++||||+++ .|+|++|+++.+ +.|..++|+|
T Consensus 162 P~~iefwq~~~~rh~R~~y~~~~~----~~W~~~rl~P 195 (195)
T 2i51_A 162 PVQVDHLELRGEPQNRWLYHRNDQ----QEWSSEAINP 195 (195)
T ss_dssp EEEEEEEESSSSSCEEEEEEECTT----SCEEEEEBCC
T ss_pred ccEEEEEecCCCCceEEEEEECCC----CCEEEEEeCC
Confidence 9999999993 499999999643 2699999998
No 2
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=100.00 E-value=1.5e-39 Score=261.60 Aligned_cols=178 Identities=13% Similarity=0.189 Sum_probs=151.7
Q ss_pred CCChhHHHHHHHHHHhcCCCCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEE
Q 028990 4 PVTAPWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYF 83 (200)
Q Consensus 4 ~~~~~w~~~l~~~~~~~~~~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~ 83 (200)
+..+.|+.||+++++. .+.++++|+|||++++|.|++|+|.++.++++ +|+|+|+.+|+|++||++||+|+|+|++
T Consensus 11 ~p~~~f~~wl~~a~~~--~~~~~~~~~LATv~~dG~P~~R~v~~~~~d~~--gl~F~T~~~S~K~~~L~~np~v~l~f~~ 86 (199)
T 1dnl_A 11 DPLTLFERWLSQACEA--KLADPTAMVVATVDEHGQPYQRIVLLKHYDEK--GMVFYTNLGSRKAHQIENNPRVSLLFPW 86 (199)
T ss_dssp SHHHHHHHHHHHHHHT--TCSCTTEEEEEEECTTSCEEEEEEECCEEETT--EEEEEEETTSHHHHHHHHCCEEEEEECC
T ss_pred ChHHHHHHHHHHHHHc--CcCCCcEEEEEEECCCCCEEEEEEEEEEEcCC--EEEEEECCCCHHHHHHhhCCeEEEEEEc
Confidence 3447999999999876 46788999999999999999999999988876 7999999999999999999999999999
Q ss_pred CCCceEEEEEEEEEEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCC--------CccCCCCCCCCCCC
Q 028990 84 TESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQP--------KEFSLDPCAGPVDA 155 (200)
Q Consensus 84 ~~~~~qiri~G~a~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~--------~~~~~~~~~~~~~~ 155 (200)
+...+||||+|+|+++++.+.+ ++|.+.+..++..++..+||++|.+... ...+.++..+.+++
T Consensus 87 ~~~~~qvri~G~a~~v~d~~~~--------~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~~~~p~p~~ 158 (199)
T 1dnl_A 87 HTLERQVMVIGKAERLSTLEVM--------KYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQGEVPLPSF 158 (199)
T ss_dssp GGGTEEEEEEEEEEECCHHHHH--------HHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTSSCCCCTT
T ss_pred CCCCEEEEEEEEEEEeCCccHH--------HHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccCCCCCCCCc
Confidence 9889999999999999986543 5688888888888877789999976542 22233322344799
Q ss_pred eEEEEEeecEEEeEecC---CCCeEEEEEccCCCCCCCceEEEeec
Q 028990 156 FCVLILDPDQVDYLNLK---SNQKLKFMSRLSDNGEKYWASLKTSP 198 (200)
Q Consensus 156 f~v~~i~p~~ve~~~~~---~h~R~~f~~~~~~~~~~~W~~~~l~P 198 (200)
|++|+|+|++||||+++ +|+|++|+++++ .|..++|+|
T Consensus 159 ~~~~~v~p~~vefw~~~~~rlh~R~~y~~~~~-----~W~~~~l~P 199 (199)
T 1dnl_A 159 WGGFRVSLEQIEFWQGGEHRLHDRFLYQREND-----AWKIDRLAP 199 (199)
T ss_dssp EEEEEECCSEEEEEECCGGGCCEEEEEEECSS-----SEEEEECCC
T ss_pred eEEEEEECCEEEEEecCCCCCceEEEEEECCC-----CEEEEEecC
Confidence 99999999999999993 799999999633 699999998
No 3
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=100.00 E-value=3.5e-39 Score=264.02 Aligned_cols=178 Identities=15% Similarity=0.242 Sum_probs=148.4
Q ss_pred CChhHHHHHHHHH-HhcCCCCCCCeEEEEeeC-CCCCceEEEEEEEEEeCCCCEEEEEecCC-CcchhhhhcCCcEEEEE
Q 028990 5 VTAPWKQLLLQAL-ESQSHLKHSIYFQLATVG-TNGRPSNRTVVFRGFQDNTDKIQINSDTR-SRKIEELKSCPFSEICW 81 (200)
Q Consensus 5 ~~~~w~~~l~~~~-~~~~~~~~~~~~~LATv~-~dG~P~~R~v~~r~~~~~~~~l~F~Td~~-S~K~~~i~~np~v~l~~ 81 (200)
....|+.||.+|+ +. .+.++++|+|||++ ++|.|++|+|++++++++ +|+|+||.+ |+|++||++||+|+|+|
T Consensus 35 P~~~f~~wl~~A~~~~--~~~~~~~~~LATvd~~dG~P~~R~V~lk~~d~~--g~~F~Tn~~~S~K~~eL~~NP~val~f 110 (228)
T 1ci0_A 35 PIDLFTKWFNEAKEDP--RETLPEAITFSSAELPSGRVSSRILLFKELDHR--GFTIYSNWGTSRKAHDIATNPNAAIVF 110 (228)
T ss_dssp HHHHHHHHHHHHHHCS--SCSCTTEEEEEEEETTTTEEEEEEEECCEECSS--SEEEEEECSSSHHHHHHHHCCEEEEEE
T ss_pred hHHHHHHHHHHHHhhc--CCCCCCEEEEEEeeCCCCCeEEEEEEEEEECCC--EEEEEeCCCCCcchHHHhhCCeEEEEE
Confidence 3468999999998 43 46789999999999 899999999999999865 799999999 99999999999999999
Q ss_pred EECCCceEEEEEEEEEEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCC--------CccCCCCC-CCC
Q 028990 82 YFTESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQP--------KEFSLDPC-AGP 152 (200)
Q Consensus 82 ~~~~~~~qiri~G~a~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~--------~~~~~~~~-~~~ 152 (200)
+|+...+||||+|+|+++++.++++| |.+.+..+|..++..+||++|.+... ...+.++. .+.
T Consensus 111 ~~~~~~rqVrI~G~ae~v~~~~~~~y--------f~~rp~~s~i~awas~qs~~i~~r~~l~~~~~~~~~~f~~~~~~p~ 182 (228)
T 1ci0_A 111 FWKDLQRQVRVEGITEHVNRETSERY--------FKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPC 182 (228)
T ss_dssp EETTTTEEEEEEEEEEECCHHHHHHH--------HHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTSCSSCCC
T ss_pred EeCCCCEEEEEEEEEEEcCchhhHHH--------HHhCCHHHhhceeeCCCCcccCCHHHHHHHHHHHHHhhcCCCCCCC
Confidence 99999999999999999998777655 66666667776666678888876431 12233332 345
Q ss_pred CCCeEEEEEeecEEEeEec---CCCCeEEEEEcc-CCCCCCCceEEEeec
Q 028990 153 VDAFCVLILDPDQVDYLNL---KSNQKLKFMSRL-SDNGEKYWASLKTSP 198 (200)
Q Consensus 153 ~~~f~v~~i~p~~ve~~~~---~~h~R~~f~~~~-~~~~~~~W~~~~l~P 198 (200)
|++|++|+|.|++||||++ ++|+|++|+++. + +.|..++|+|
T Consensus 183 p~~w~g~rv~P~~iEfWq~~~~rlHdR~~y~r~~~~----~~W~~~rL~P 228 (228)
T 1ci0_A 183 PDYWGGLRIVPLEIEFWQGRPSRLHDRFVYRRKTEN----DPWKVVRLAP 228 (228)
T ss_dssp CTTEEEEEEEEEEEEEEECCTTSCCEEEEEECSSTT----SCCEEEEECC
T ss_pred CCcEEEEEEEccEEEEeeCCCCCcEEEEEEEecCCC----CCeEEEEecC
Confidence 8999999999999999998 479999999962 2 2699999998
No 4
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=100.00 E-value=8.7e-38 Score=259.91 Aligned_cols=183 Identities=18% Similarity=0.337 Sum_probs=148.0
Q ss_pred CChhHHHHHHHHHHhcCCCCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEEC
Q 028990 5 VTAPWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFT 84 (200)
Q Consensus 5 ~~~~w~~~l~~~~~~~~~~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~ 84 (200)
....|+.||+++++.. .+.++++|+|||+++||.|++|+|++++++++ +|+|+||.+|+|++||++||+|+|+|+|+
T Consensus 58 P~~~f~~Wl~~A~~~~-~l~e~~~~~LATvd~dG~P~~R~V~lk~~d~~--gl~F~Tn~~S~K~~eL~~NP~vaL~f~~~ 134 (261)
T 1nrg_A 58 PVKQFAAWFEEAVQCP-DIGEANAMCLATCTRDGKPSARMLLLKGFGKD--GFRFFTNFESRKGKELDSNPFASLVFYWE 134 (261)
T ss_dssp HHHHHHHHHHHHHHCT-TCSCTTEEEEEEECTTSCEEEEEEECCCEETT--EEEEEEETTSHHHHHHHHSCEEEEEEEEG
T ss_pred HHHHHHHHHHHHHhhc-cCCCCcEEEEEEECCCCCeeEEEEEEEEEcCC--EEEEEECCCChhHHHHhhCCeEEEEEEeC
Confidence 3468999999998751 35688999999999999999999999999876 79999999999999999999999999999
Q ss_pred CCceEEEEEEEEEEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCC--------CccCCCCCCCCCCCe
Q 028990 85 ESWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQP--------KEFSLDPCAGPVDAF 156 (200)
Q Consensus 85 ~~~~qiri~G~a~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~--------~~~~~~~~~~~~~~f 156 (200)
...+||||+|+|+++++.+.++ .|.+.+..+|..++...||++|.+... ...+.++..+.|++|
T Consensus 135 ~~~rqVrI~G~ae~v~d~e~~~--------~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~~~~~~f~~~~vp~p~~w 206 (261)
T 1nrg_A 135 PLNRQVRVEGPVKKLPEEEAEC--------YFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQEVPKPKSW 206 (261)
T ss_dssp GGTEEEEEEEEEEECCHHHHHH--------HHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTTSCCCCCTTE
T ss_pred CCCEEEEEEEEEEEecCcchHH--------HHhcCChhhhhhhhcCCCCCccCCHHHHHHHHHHHHhhcccCCCCCCCcE
Confidence 9999999999999999887554 466666666666655578888865331 122333223447899
Q ss_pred EEEEEeecEEEeEec---CCCCeEEEEEccC------C----CCCCCceEEEeec
Q 028990 157 CVLILDPDQVDYLNL---KSNQKLKFMSRLS------D----NGEKYWASLKTSP 198 (200)
Q Consensus 157 ~v~~i~p~~ve~~~~---~~h~R~~f~~~~~------~----~~~~~W~~~~l~P 198 (200)
++|+|+|++||||++ ++|+|++|++... + ++++.|..++|+|
T Consensus 207 ~g~rv~P~~vEfwq~~~~rlHdR~~y~r~~~~~~~~~~~~~~~~~~~W~~~rL~P 261 (261)
T 1nrg_A 207 GGYVLYPQVMEFWQGQTNRLHDRIVFRRGLPTGDSPLGPMTHRGEEDWLYERLAP 261 (261)
T ss_dssp EEEEECCSEEEEEECCTTSCCEEEEEEECSSTTSCCCCTTCEECSTTEEEEECCC
T ss_pred EEEEEEccEEEEEECCCCCCeEEEEEEECCccccccccccccCCCCCeEEEEccC
Confidence 999999999999999 3799999999430 0 0124799999998
No 5
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=100.00 E-value=8.5e-37 Score=249.18 Aligned_cols=176 Identities=19% Similarity=0.314 Sum_probs=138.5
Q ss_pred ChhHHHHHHHHHHhcCCCCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 6 TAPWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 6 ~~~w~~~l~~~~~~~~~~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
...++.||.++++. .+.++++++|||+++||.|++|+|++++++++ +|+|+||.+|+|++||++||+|+|+|+++.
T Consensus 38 ~~~f~~Wl~~A~~~--~~~~~~~~~LATvd~dG~P~~R~v~l~~~d~~--gl~F~T~~~S~K~~eL~~nP~val~f~~~~ 113 (222)
T 1ty9_A 38 MSVLHNWLERARRV--GIREPRALALATADSQGRPSTRIVVISEISDA--GVVFSTHAGSQKGRELLHNPWASGVLYWRE 113 (222)
T ss_dssp HHHHHHHHHHHHHH--TCSSTTEEEEEEECTTCCEEEEEEECCEECSS--EEEEEEETTSHHHHHHHHCCEEEEEEEETT
T ss_pred HHHHHHHHHHHHHh--ccCCCCEEEEEEECCCCCEEEEEEEEEEEcCC--EEEEEECCCCcchHHHhhCCeEEEEEEcCC
Confidence 35788999998886 45688999999999999999999999998875 899999999999999999999999999999
Q ss_pred CceEEEEEEEEEEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCC-----CccCC-CCCCCCCCCeEEE
Q 028990 86 SWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQP-----KEFSL-DPCAGPVDAFCVL 159 (200)
Q Consensus 86 ~~~qiri~G~a~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~-----~~~~~-~~~~~~~~~f~v~ 159 (200)
..+||||+|+|+++++.+.++| |.+.+..+|...+...++.++.++.. ..+.. +...+.+++|++|
T Consensus 114 ~~rqvrI~G~ae~v~~~~~~~~--------w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~~~~~~~~~~p~p~~w~~~ 185 (222)
T 1ty9_A 114 TSQQIILNGQAVRLPNAKADDA--------WLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAELQGPLPRPEGYCVF 185 (222)
T ss_dssp TTEEEEEEEEEEECCHHHHHHH--------HHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHHHHHTSCSCCCCCTTEEEE
T ss_pred CCeEEEEEEEEEEEccHHhHHH--------HHhCccccccceeeccCCCcCCChHHHHHHHHHHhhccCCCCCCCCEEEE
Confidence 9999999999999997666554 44443333333332344555533211 01111 1122357999999
Q ss_pred EEeecEEEeEec---CCCCeEEEEEccCCCCCCCceEEEeec
Q 028990 160 ILDPDQVDYLNL---KSNQKLKFMSRLSDNGEKYWASLKTSP 198 (200)
Q Consensus 160 ~i~p~~ve~~~~---~~h~R~~f~~~~~~~~~~~W~~~~l~P 198 (200)
+|+|++||||++ ++|+|++|+++++ .|..++|+|
T Consensus 186 rv~P~~vEfwq~~~~rlHdR~~y~~~~~-----~W~~~rL~P 222 (222)
T 1ty9_A 186 ELRLESLEFWGNGQERLHERLRYDRSDT-----GWNVRRLQP 222 (222)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEEEETT-----EEEEEEECC
T ss_pred EEEeeEEEEEECCCCCCcEEEEEEECCC-----CEEEEEecC
Confidence 999999999998 4799999999643 699999998
No 6
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=100.00 E-value=1.3e-36 Score=250.61 Aligned_cols=171 Identities=16% Similarity=0.209 Sum_probs=143.5
Q ss_pred hhHHHHHHHHHHhcCCCCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC
Q 028990 7 APWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES 86 (200)
Q Consensus 7 ~~w~~~l~~~~~~~~~~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~ 86 (200)
..++.||++|++. ...++++|+|||++ +|.|++|+|++++++++ +|+|+||.+|+|++||++||+|+|+|+|+..
T Consensus 63 ~~f~~Wl~~A~~~--~~~e~~~~~LATvd-dG~P~~R~Vllk~~d~~--gl~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~ 137 (246)
T 2a2j_A 63 TLLRRWLNDAQRA--GVSEPNAMVLATVA-DGKPVTRSVLCKILDES--GVAFFTSYTSAKGEQLAVTPYASATFPWYQL 137 (246)
T ss_dssp HHHHHHHHHHHHT--TCSSTTEEEEEEEE-TTEEEEEEEEEEEEETT--EEEEEEETTSHHHHHHHHSCEEEEEEEEGGG
T ss_pred HHHHHHHHHHHhc--cCCCCceEEEEEcC-CCceEEEEEEEEEEcCC--EEEEEEcCCChhhHHHhhCCeEEEEEEeCCC
Confidence 5788999998876 45689999999999 99999999999999875 8999999999999999999999999999999
Q ss_pred ceEEEEEEEEEEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCC--------CccCCCC-CCCCCCCeE
Q 028990 87 WDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQP--------KEFSLDP-CAGPVDAFC 157 (200)
Q Consensus 87 ~~qiri~G~a~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~--------~~~~~~~-~~~~~~~f~ 157 (200)
.+||||+|+|+++++.++++ .|.+.+..+|..++..+||++|.+... ...+.++ ..+.|++|+
T Consensus 138 ~rqVrI~G~ae~v~~~es~~--------yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~~~~~f~~~~~vp~pp~w~ 209 (246)
T 2a2j_A 138 GRQAHVQGPVSKVSTEEIFT--------YWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFADQDQIPVPPGWG 209 (246)
T ss_dssp TEEEEEEEEEEECCHHHHHH--------HHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTTCSSCCCCTTEE
T ss_pred CEEEEEEEEEEEeccHhHHH--------HHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHHHHHhcccCCCCCCCCcEE
Confidence 99999999999999876654 466667777776666678899876532 1112322 234589999
Q ss_pred EEEEeecEEEeEec---CCCCeEEEEEccCCCCCCCceEEEeecC
Q 028990 158 VLILDPDQVDYLNL---KSNQKLKFMSRLSDNGEKYWASLKTSPE 199 (200)
Q Consensus 158 v~~i~p~~ve~~~~---~~h~R~~f~~~~~~~~~~~W~~~~l~P~ 199 (200)
+|+|.|++||||++ ++|+|++|++ + ..++|+|-
T Consensus 210 g~rv~P~~iEfWqg~~~rlHdR~~y~r--~-------~~~rL~P~ 245 (246)
T 2a2j_A 210 GYRIAPEIVEFWQGRENRMHNRIRVAN--G-------RLERLQPG 245 (246)
T ss_dssp EEEECCSEEEEEECCTTSCCEEEEEET--T-------EEEECCTT
T ss_pred EEEEEcCEEEEccCCCCCCeEEEEEEC--C-------CcEECCCC
Confidence 99999999999998 4799999987 1 88999995
No 7
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=100.00 E-value=8.5e-36 Score=235.25 Aligned_cols=161 Identities=23% Similarity=0.388 Sum_probs=140.1
Q ss_pred hhHHHHHHHHHHhcCCCCCC-CeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 7 APWKQLLLQALESQSHLKHS-IYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 7 ~~w~~~l~~~~~~~~~~~~~-~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
++|+.++..+++. .++ ++++|||++++| |++|+|++++++++.++|+|+||.+|+|++||++||+|+|+|++++
T Consensus 13 ~~w~~l~~~~~~~----~~p~~~~~LATv~~dG-P~~R~v~~~~~~~~~~~l~F~T~~~s~K~~~l~~nP~v~l~f~~~~ 87 (175)
T 2ou5_A 13 TVWQQFGRGTKDR----HHPARHPTLATIGTDG-PDLRTLVLRAASHAEATLEFHTDAASPKVAHIRRDARVAIHIWIPK 87 (175)
T ss_dssp HHHHHHHHHHHCT----TSGGGSCEEEEEETTE-EEEEECCCCEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEEEGG
T ss_pred hhHHHHHHhcccC----CCCcceEEEEEeCCCC-CceeEEEEEEEEcCCCEEEEEECCCChHHHHHhhCCcEEEEEEeCC
Confidence 5799988887643 244 899999999999 9999999999985446999999999999999999999999999999
Q ss_pred CceEEEEEEEEEEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecE
Q 028990 86 SWDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQ 165 (200)
Q Consensus 86 ~~~qiri~G~a~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ 165 (200)
..+||||+|+|+++++. + ++|.+.++.+|..|.++.||+++.+ . + .+.+++|++|+|.|++
T Consensus 88 ~~~qvri~G~a~~~~d~--~--------~~w~~~~~~~~~~~~~~~~~~~~~~-~---l-----~~~p~~~~~~~v~p~~ 148 (175)
T 2ou5_A 88 ASLQVRAKAIAKILPGD--P--------NLFAQLPEAARMNYQGPVPGTPLPA-E---P-----DATPNRFTRLICHLSE 148 (175)
T ss_dssp GTEEEEEEEEEEEEECC--H--------HHHHHSCHHHHGGGSSSCTTCBSSC-C---C-----CCCSCCEEEEEEEEEE
T ss_pred CCEEEEEEEEEEEeCcH--H--------HHHHHCCHhHHhcccCCCCCCcccc-c---c-----CCCCCcEEEEEEEeeE
Confidence 99999999999999987 3 4799999999999877789999865 1 1 1347899999999999
Q ss_pred EEeEecC-CCCeEEEEEccCCCCCCCceEEEeec
Q 028990 166 VDYLNLK-SNQKLKFMSRLSDNGEKYWASLKTSP 198 (200)
Q Consensus 166 ve~~~~~-~h~R~~f~~~~~~~~~~~W~~~~l~P 198 (200)
||||+++ .|+|++|+++ + |..++|+|
T Consensus 149 vefw~~~~~h~R~~y~~~------~-W~~~~l~P 175 (175)
T 2ou5_A 149 IDVLHLTTPHQRAVYTAP------D-WRGIWVSP 175 (175)
T ss_dssp EEEEECCSSCEEEEEETT------T-CCCEEECC
T ss_pred EEEEeCCCCceEEEEEcC------C-ceEEEecC
Confidence 9999994 4899999873 2 99999998
No 8
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=99.88 E-value=9.4e-23 Score=155.93 Aligned_cols=117 Identities=12% Similarity=-0.010 Sum_probs=91.6
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCCCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSNS 104 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~~~ 104 (200)
+.++++|||++++| |++|+|.+..-.++.+.|||+|+..|+|++||++||+|+|+|+++...+|++|+|+|++++|.+.
T Consensus 18 ~~~~~~LaT~~~d~-~~~~pm~~~~~~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~d~~~ 96 (147)
T 3dmb_A 18 SDRTVMLGLDGVED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAV 96 (147)
T ss_dssp HHCEEEEEETTSSS-CCCEEEEEECSSSSCCCEEEEECTTCTTHHHHTTCEEEEEEEECTTSSEEEEEEEEEEECCCHHH
T ss_pred cCCEEEEEEEcCCC-CceEeCccccccCCCceEEEEecCCcHHHHHHhhCCeEEEEEEcCCCCeEEEEEEEEEEecCHHH
Confidence 45899999999876 89999998522222246999999999999999999999999999988899999999999987643
Q ss_pred ChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEecC
Q 028990 105 DPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLK 172 (200)
Q Consensus 105 ~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~~ 172 (200)
. .++|... . +.+++++ +.+|++++|+|.|++++||+.+
T Consensus 97 ~-------~~~~~~~---~------------------~~~~~~g--~~dp~~~vl~v~p~~~e~W~~~ 134 (147)
T 3dmb_A 97 V-------DRLWNPY---V------------------AAWYEGG--KDDPKLALLRLDADHAQIWLNG 134 (147)
T ss_dssp H-------HHHCCHH---H------------------HHHCTTG--GGCTTCEEEEEEEEEEEEEECC
T ss_pred H-------HHHhhHH---H------------------HHHccCC--CCCCCEEEEEEEcCEEEEEECC
Confidence 2 3456321 1 1122211 2368999999999999999985
No 9
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=99.87 E-value=1.6e-22 Score=151.28 Aligned_cols=117 Identities=9% Similarity=0.122 Sum_probs=92.7
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCCCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSNS 104 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~~~ 104 (200)
++++++|||++++|.|++|||.+...+++.+.|||+|+..|+|+++|++||+|+++|+++...++++|+|+|+++++.+.
T Consensus 17 ~~~~~~LaT~~~dG~P~~~pv~~~~~~~~~~~l~f~t~~~s~K~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~d~~~ 96 (134)
T 2re7_A 17 DVKFAMISTSNKKGDIHAWPMTTSEVNLDNKEIWFIGDKTSDVVKDIQDDARIGLTYATQDEKNYVSISGDAELPTDKAK 96 (134)
T ss_dssp HCSCEEEEEECTTSCEEEEEECCSEEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTSSCEEEEEEEEECCCCHHH
T ss_pred cCCEEEEEEEcCCCCEEEEecEeeeecCCCceEEEEECCCCHHHHHHhhCCcEEEEEEcCCCCeEEEEEEEEEEECCHHH
Confidence 35789999999999999999999766532358999999999999999999999999999988899999999999987532
Q ss_pred ChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEec
Q 028990 105 DPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNL 171 (200)
Q Consensus 105 ~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~ 171 (200)
..++|... .+ .++++. +.++++++|+|.|++++||+.
T Consensus 97 -------~~~~~~~~---~~------------------~~~~~~--~~~~~~~~~~i~~~~~~~w~~ 133 (134)
T 2re7_A 97 -------LDELWSPV---YS------------------AFFANG--KEDANIQLIKVVPHGVECWLS 133 (134)
T ss_dssp -------HHHHCCHH---HH------------------HTSTTG--GGCTTEEEEEEEEEEEEEECC
T ss_pred -------HHHHhhHH---HH------------------HHccCC--CCCCCEEEEEEEeCEEEEecC
Confidence 13355321 11 111111 125799999999999999975
No 10
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=99.86 E-value=3e-21 Score=146.73 Aligned_cols=119 Identities=14% Similarity=0.176 Sum_probs=93.4
Q ss_pred CCCCCeEEEEeeCCCCCceEEEEEE-EEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcC
Q 028990 23 LKHSIYFQLATVGTNGRPSNRTVVF-RGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDG 101 (200)
Q Consensus 23 ~~~~~~~~LATv~~dG~P~~R~v~~-r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~ 101 (200)
+.+.++++|||++++|.|++|+|.+ ..+++ .+.|||+|+..|+|+++|++||+|+++|+++...++++|+|+|+++++
T Consensus 19 l~~~~~~~LaT~~~dG~P~~~pv~~~~~~~~-~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~v~d 97 (148)
T 2i02_A 19 IKNIDYGMFTTVDDDGSLHSYPMSKSGDINS-EATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQQRYVSISGTSQLVKD 97 (148)
T ss_dssp HTTCCEEEEEEECTTSCEEEEEEECBCC----CCEEEEEEETTSHHHHHHHHCCEEEEEEEETTTTEEEEEEEEEEEECC
T ss_pred HhcCCEEEEEEEcCCCCEEEEEeEeeEEEcC-CCeEEEEEcCCCHHHHHHHhCCcEEEEEEcCCCCeEEEEEEEEEEEcC
Confidence 3467899999999999999999998 65552 258999999999999999999999999999988899999999999987
Q ss_pred CCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEecC
Q 028990 102 SNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLK 172 (200)
Q Consensus 102 ~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~~ 172 (200)
.+. ..++|... .+.++++. ++.++|++|+|.|++++||+.+
T Consensus 98 ~~~-------~~~~~~~~---------------------~~~~~~~~--~~~~~~~v~~i~~~~~~~~~~~ 138 (148)
T 2i02_A 98 RNK-------MRELWKPE---------------------LQTWFPKG--LDEPDIALLKVNINQVNYWDST 138 (148)
T ss_dssp HHH-------HHHHCCGG---------------------GGGTCTTG--GGCTTEEEEEEEEEEEEEEEGG
T ss_pred HHH-------HHHHHhHH---------------------HHHHccCC--CCCCCEEEEEEEeCEEEEEcCC
Confidence 532 13456432 11122111 1246899999999999999984
No 11
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=99.85 E-value=7.7e-22 Score=152.79 Aligned_cols=122 Identities=9% Similarity=0.041 Sum_probs=94.0
Q ss_pred CCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCE-EEEEecCCCcchhhhhcCCc-EEEEEEECCCceEEEEEEEEEEEcC
Q 028990 24 KHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDK-IQINSDTRSRKIEELKSCPF-SEICWYFTESWDQFRINGRVDVIDG 101 (200)
Q Consensus 24 ~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~-l~F~Td~~S~K~~~i~~np~-v~l~~~~~~~~~qiri~G~a~~~~~ 101 (200)
.+.++++||| +|.|++|||.+..++++ +. |||+|+..|+|+++|++||+ |+++|+++...+|++|+|+|++++|
T Consensus 14 ~~~~~~~LaT---dG~P~~rpv~~~~~~~~-g~~l~f~t~~~s~K~~~l~~np~~v~l~~~~~~~~~~v~v~G~a~~v~d 89 (160)
T 2qea_A 14 EDVRSGMLGI---KGQGRLIPMSPQTDDDA-PGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGEGLYADLDGTLERSTD 89 (160)
T ss_dssp TTCCCEEEEE---TTSSCCEEECCBCCTTS-CSCEEEEEETTSHHHHHTSSSCEEEEEEEEETTTTEEEEEEEEEEEECC
T ss_pred hcCCEEEEEe---CCCeeEEEeeeeEecCC-CCEEEEEECCCCHHHHHHHhCCceEEEEEECCCCCeEEEEEEEEEEEcC
Confidence 4678999999 79999999999755433 45 99999999999999999999 9999999988899999999999987
Q ss_pred CCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEecC-CCCeEEE
Q 028990 102 SNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLK-SNQKLKF 179 (200)
Q Consensus 102 ~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~~-~h~R~~f 179 (200)
.+.. .++|... . +.++.++ +.+|++++|+|.|+++|||+.+ ..-|..|
T Consensus 90 ~~~~-------~~~~~~~---~------------------~~~~~~~--~~~p~~~v~~i~p~~~e~w~~~~~~l~~~~ 138 (160)
T 2qea_A 90 REAL-------DEFWSFV---A------------------DAWFDGG--QHDPDVCLLKFTPASGEISITEGGGARFLY 138 (160)
T ss_dssp HHHH-------HHSCCHH---H------------------HHHCTTC--SSCTTEEEEEEEEEEEEEEEECCSSHHHHH
T ss_pred HHHH-------HHHHHHH---H------------------HHHccCC--CCCCCEEEEEEECCEEEEEECCCChHHHHH
Confidence 5322 3455431 1 1111111 2367999999999999999985 3334433
No 12
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=99.85 E-value=1.8e-20 Score=143.02 Aligned_cols=126 Identities=13% Similarity=0.114 Sum_probs=96.5
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC--ceEEEEEEEEEEEcCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES--WDQFRINGRVDVIDGS 102 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~--~~qiri~G~a~~~~~~ 102 (200)
+.++++|||+++||.|++|+|.+...+++ .|||+|+..|+|+++|++||+|+++++++.. .++++|+|+|+++++.
T Consensus 13 ~~~~~~LaTv~~dG~P~~~p~~~~~~~~~--~l~f~t~~~s~k~~~l~~np~V~l~~~~~~~~~~~~v~i~G~a~~v~d~ 90 (150)
T 2hhz_A 13 DMKVGVFATLDEYGNPHARHAHITAANEE--GIFFMTSPETHFYDQLMGDQRVAMTAISEEGYLIQVVRVEGTARPVEND 90 (150)
T ss_dssp HTCEEEEEEECTTCCEEEEEEEEEEEETT--EEEEEECTTSHHHHHHHHCCEEEEEEEECSTTCCEEEEEEEEEEEECHH
T ss_pred cCCeEEEEEECCCCCEEEEEEEEEEEcCC--EEEEEecCCCHHHHHHhhCCeEEEEEEcCCcceeEEEEEEEEEEECCcH
Confidence 35799999999999999999999755554 8999999999999999999999999999865 3899999999999976
Q ss_pred CCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEecCCCCeEEEEEc
Q 028990 103 NSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKSNQKLKFMSR 182 (200)
Q Consensus 103 ~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~~~h~R~~f~~~ 182 (200)
+. .++|... +..+ .++.+ +.++++++++|.|.+++||++..+....|...
T Consensus 91 ~~--------~~~~~~~-p~~~------------------~~~~~---~~~~~~~v~~i~~~~~~~~d~~~~~~~~~~~~ 140 (150)
T 2hhz_A 91 YL--------KTVFADN-PYYQ------------------HIYKD---ESSDTMQVFQIYAGHGFYHSLTQGHKYIFSIG 140 (150)
T ss_dssp HH--------HHHHTTC-GGGG------------------GGCC--------CCEEEEEEEEEEEEEEGGGTEEEEEEEC
T ss_pred HH--------HHHHHhC-hhhh------------------hcccC---CCCCcEEEEEEEccEEEEEECCCCCcEEEEeC
Confidence 42 2467542 2222 12211 23579999999999999999964333366664
No 13
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.84 E-value=6e-21 Score=146.44 Aligned_cols=115 Identities=18% Similarity=0.132 Sum_probs=94.0
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCCCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSNS 104 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~~~ 104 (200)
++++++|||++ +|.|++|||.+...+++ .|||+|+.+|+|+++|++||+|+++|+++. .++|+|+|+|+++++.+.
T Consensus 29 ~~~~~~LaTv~-dG~P~~rpv~~~~~~~~--~l~f~t~~~s~K~~~l~~np~V~l~~~~~~-~~~v~i~G~a~~v~d~e~ 104 (150)
T 2ig6_A 29 ECGVFYLATNE-GDQPRVRPFGAVFEYEG--KLYIVSNNTKKCFKQMIQNPKVEISGMNKK-GQWIRLTGEVANDDRREV 104 (150)
T ss_dssp HHCSEEEEEEE-TTEEEEEEECCCEEETT--EEEEEEETTSHHHHHHHHCCEEEEEEECTT-SCEEEEEEEEEECCCHHH
T ss_pred hCCeEEEEEcc-CCceEEEEeEEEEEcCC--EEEEEeCCCcHHHHHHHHCCCEEEEEEcCC-CeEEEEEEEEEEECCHHH
Confidence 45789999999 99999999998655554 899999999999999999999999999987 789999999999987642
Q ss_pred ChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEecCC
Q 028990 105 DPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKS 173 (200)
Q Consensus 105 ~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~~~ 173 (200)
..++|... +..+ .++ + +++|++++++|.|.+++||+...
T Consensus 105 -------~~~~~~~~-p~~~------------------~~~-~---~~dp~~~l~~v~~~~a~~wd~~~ 143 (150)
T 2ig6_A 105 -------KELALEAV-PSLK------------------NMY-S---VDDGIFAVLYFTKGEGTICSFKG 143 (150)
T ss_dssp -------HHHHHHHS-GGGG------------------GTC-C---TTSSCEEEEEEEEEEEEEECSSS
T ss_pred -------HHHHHHhC-hHHH------------------Hhh-c---CCCCcEEEEEEECCEEEEEeCCC
Confidence 23577653 2222 233 2 23689999999999999999853
No 14
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=99.84 E-value=9e-22 Score=155.84 Aligned_cols=124 Identities=12% Similarity=-0.008 Sum_probs=95.2
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCCCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSNS 104 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~~~ 104 (200)
+.++++|||++++| |++|+|.+..-.++.+.|||+|+..|+|++||++||+|+++|.++...+|++|+|+|++++|.+.
T Consensus 37 ~~~~~~LaTv~~dg-p~~rpm~~~~d~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~~~~~~V~v~G~a~vv~D~e~ 115 (182)
T 3u35_A 37 SDRTVMLGLDGVED-GHARPMTAQIEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSKGHDLFASISGSLREDTDPAM 115 (182)
T ss_dssp HHCEEEECCTTSGG-GCCEEEECBCSSSSCSCEEEEEETTCGGGGGCTTCEEEEEEEECTTSSEEEEEEEEEEECCCHHH
T ss_pred cCCEEEEEEecCCC-CcEEEEEEEEeecCCCEEEEEECCCCHHHHHHHHCCcEEEEEECCCCCeEEEEEEEEEEEcCHHH
Confidence 45899999999876 89999998522222246999999999999999999999999999988899999999999987643
Q ss_pred ChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEecC--CCCeEEE
Q 028990 105 DPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLK--SNQKLKF 179 (200)
Q Consensus 105 ~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~~--~h~R~~f 179 (200)
. .++|... .+.+++++ +++|+++||+|.|++++||+.+ .-.|+.+
T Consensus 116 ~-------~~lw~~~---------------------~~~~~p~g--~~dP~~~vlrv~p~~~e~Wd~~~~~~~~~~~ 162 (182)
T 3u35_A 116 V-------DRLWNPY---------------------VAAWYEGG--KTDPNLALLRLDADHAQIWLNESSLLAGIKV 162 (182)
T ss_dssp H-------HHHCCHH---------------------HHTTCTTG--GGCTTEEEEEEEEEEEEEEEEEEEECCCEEE
T ss_pred H-------HHHHHHH---------------------HHHhccCC--CCCCCEEEEEEEeCEEEEEeCCCCceeeeee
Confidence 2 3456431 12233222 2368999999999999999984 3344444
No 15
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=99.84 E-value=1e-20 Score=145.68 Aligned_cols=122 Identities=11% Similarity=0.084 Sum_probs=95.5
Q ss_pred CCCeEEEEeeCCC-CCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCCC
Q 028990 25 HSIYFQLATVGTN-GRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSN 103 (200)
Q Consensus 25 ~~~~~~LATv~~d-G~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~~ 103 (200)
+.++++|||+++| |.|++++|.+. +++ +.|||+|+..|+|+++|++||+|+|++.++ ..+++|+|+|+++++.+
T Consensus 23 ~~~~~~LaT~~~d~G~P~~~pv~~~-~d~--~~l~f~t~~~s~K~~~l~~np~Vsl~v~~~--~~~v~v~G~a~~v~d~~ 97 (155)
T 2iab_A 23 LDVDAWVSTAGADGGAPYLVPLSYL-WDG--ETFLVATPAASPTGRNLSETGRVRLGIGPT--RDLVLVEGTALPLEPAG 97 (155)
T ss_dssp HCCEEEEEEECTTSSCEEEEEEECE-ECS--SCEEEEEETTSHHHHHHHHHCEEEEEESST--TCEEEEEEEEEEECGGG
T ss_pred CCCeEEEEEecCCCCCceEEEEEEE-EEC--CEEEEEECCCCHHHHHHhhCCcEEEEEEcC--CCEEEEEEEEEEecCch
Confidence 4689999999999 99999999986 655 489999999999999999999999999877 47999999999998654
Q ss_pred CChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEec--CCCCeEEEE
Q 028990 104 SDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNL--KSNQKLKFM 180 (200)
Q Consensus 104 ~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~--~~h~R~~f~ 180 (200)
... ++|... ...|. + ++. ...+.+++|+|.|+++++|+. ++|+|.+|.
T Consensus 98 ~~~-------~~~~~~----~~k~~---------------~--~~~-~~~~~~~~~ri~p~~v~~w~~~~~l~~r~~~~ 147 (155)
T 2iab_A 98 LPD-------GVGDTF----AEKTG---------------F--DPR-RLTTSYLYFRISPRRVQAWREANELSGRELMR 147 (155)
T ss_dssp CCT-------THHHHH----HHHHS---------------C--CGG-GCSSCEEEEEEEEEEEEEESSGGGSTTCEEEE
T ss_pred hHH-------HHHHHH----HHHhC---------------C--Ccc-ccCCCEEEEEEEEEEEEEecCCCCcCcceEEE
Confidence 321 233321 01110 0 000 013569999999999999997 699999998
No 16
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=99.82 E-value=1.4e-19 Score=136.49 Aligned_cols=114 Identities=19% Similarity=0.302 Sum_probs=88.7
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEE---ECCCceEEEEEEEEEEEcC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWY---FTESWDQFRINGRVDVIDG 101 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~---~~~~~~qiri~G~a~~~~~ 101 (200)
+.++++|||++ +|.|++|||.+.. ++ +.|||+|+..|+|+++|++||+|++++. ++...++++|+|+|++++|
T Consensus 14 ~~~~~~LaT~~-dg~P~~~pv~~~~-~~--~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~d~~~~~~v~v~G~a~~~~d 89 (139)
T 3ec6_A 14 GQRTGVLSTVR-NDKPHSAFMMFFH-ED--FVLYVATDRQSKKITDIENNPNVHVLLGREGKKLDEDYIEVEGLASIEED 89 (139)
T ss_dssp SCCEEEEEEEE-TTEEEEEEEECEE-ET--TEEEEEEETTCHHHHHHHHCCEEEEEECC---CTTCCEEEEEEEEEEECC
T ss_pred cCCEEEEEEec-CCCEEEEEEEEEE-eC--CEEEEEECCCCHHHHHHHhCCcEEEEEEecCCCCCccEEEEEEEEEEEcC
Confidence 56899999999 9999999999974 54 4999999999999999999999999984 2445789999999999987
Q ss_pred CCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEecCC
Q 028990 102 SNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKS 173 (200)
Q Consensus 102 ~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~~~ 173 (200)
.+. ..++|... .+.++.+ +++|++++++|.|++++||+..+
T Consensus 90 ~~~-------~~~~~~~~---------------------~~~~~~~---~~~~~~~~i~i~p~~~~~~d~~g 130 (139)
T 3ec6_A 90 STL-------KNKFWNNS---------------------LKRWLLR---PEDPNYVLIKINPDTIYYIDGAG 130 (139)
T ss_dssp HHH-------HHHHCCGG---------------------GGGTCSS---TTCTTEEEEEEEEEEEEEEC---
T ss_pred HHH-------HHHHHHHH---------------------HHHHhCC---CCCCCEEEEEEEeeEEEEEcCCC
Confidence 532 23456531 1223321 23689999999999999999854
No 17
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=99.81 E-value=1.3e-19 Score=136.99 Aligned_cols=118 Identities=15% Similarity=0.219 Sum_probs=93.3
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCCCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSNS 104 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~~~ 104 (200)
+.++++|||++++|.|++|||.+...++ .+.|||+|+..|+|+++|++||+|+++|+++...++++|+|+|+++++.+.
T Consensus 17 ~~~~~~LaT~~~~G~P~~~pv~~~~~~~-~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~v~d~~~ 95 (146)
T 2hq7_A 17 SSKIVMVGTNGENGYPNIKAMMRLKHDG-LKKFWLSTNTSTRMVERLKKNNKICLYFVDDNKFAGLMLVGTIEILHDRAS 95 (146)
T ss_dssp HCSEEEEEEECGGGCEEEEEEEEEEEET-TTEEEEEEECCHHHHHHHHHCCEEEEEEECSSSSEEEEEEEEEEEECCHHH
T ss_pred cCCEEEEEEECCCCCEEEEEEEEEEEcC-CCEEEEEecCCCHHHHHHhhCCeEEEEEECCCCceEEEEEEEEEEEcCHHH
Confidence 3479999999989999999999975543 358999999999999999999999999999988899999999999987532
Q ss_pred ChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEecCC
Q 028990 105 DPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKS 173 (200)
Q Consensus 105 ~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~~~ 173 (200)
..++|.... ++++++. +.+++|++|+|.|++++||+...
T Consensus 96 -------~~~~~~~~~---------------------~~~~~~~--~~~~~~~~~~i~p~~~~~w~~~~ 134 (146)
T 2hq7_A 96 -------KEMLWTDGC---------------------EIYYPLG--IDDPDYTALCFTAEWGNYYRHLK 134 (146)
T ss_dssp -------HHHHCCTTH---------------------HHHCTTG--GGCTTEEEEEEEEEEEEEEETTE
T ss_pred -------HHHHHHHHH---------------------HHHCCCC--CCCCCEEEEEEEccEEEEEeCCC
Confidence 123554321 1111111 12478999999999999999753
No 18
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=99.79 E-value=2.8e-19 Score=132.68 Aligned_cols=111 Identities=20% Similarity=0.275 Sum_probs=82.3
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEE-CCCceEEEEEEEEEEEcCCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYF-TESWDQFRINGRVDVIDGSN 103 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~-~~~~~qiri~G~a~~~~~~~ 103 (200)
+.++++|||++ +|.|++|||.+.. ++ +.|||+|+..|+|+++|++||+|++++.+ +...++++|.|+|++++|.+
T Consensus 16 ~~~~~~LaT~~-~g~P~~~pv~~~~-~~--~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~~~~~v~v~G~a~~v~d~~ 91 (128)
T 3db0_A 16 QHQVGVLTSVQ-GDFPHARYMTFLH-DG--LTLYTPSGKELPKTEEVRRNPHVCVLIGYDSPGSAFLEINGLASLEEDES 91 (128)
T ss_dssp TCCEEEEEEEE-TTEEEEEEEECEE-ET--TEEEEEC----CTTCCCCCCCEEEEEECCCSTTCCEEEEEEEEEECCCHH
T ss_pred hCCEEEEEEec-CCCEEEEEEEEEe-cC--CEEEEEECCCCHHHHHHHhCCceEEEEEEcCCCCcEEEEEEEEEEEcCHH
Confidence 56899999997 7999999999864 54 49999999999999999999999999865 66678999999999998753
Q ss_pred CChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEe
Q 028990 104 SDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLN 170 (200)
Q Consensus 104 ~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~ 170 (200)
. ..++|... .+.|+.. +++|++++|+|.|++++||+
T Consensus 92 ~-------~~~~~~~~---------------------~~~~~~~---~~~~~~~~~ri~p~~~~~~~ 127 (128)
T 3db0_A 92 I-------KERIWENI---------------------SKDWFQG---EDSPSFVVIKIVPEQIRILN 127 (128)
T ss_dssp H-------HHHHHHHH---------------------CSSCCC---------CCEEEEEEEEEEEEC
T ss_pred H-------HHHHHHHH---------------------HHHhCCC---CCCCCEEEEEEEeEEEEEec
Confidence 2 23566531 1223321 23589999999999999996
No 19
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.77 E-value=1.4e-17 Score=125.05 Aligned_cols=114 Identities=17% Similarity=0.239 Sum_probs=89.9
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCCCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGSNS 104 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~~~ 104 (200)
..++++|||++++|.|++++|.+...++ .+.|||+|+..|+|+++|++||+|+++|.++. ++++|.|+|+++++.+.
T Consensus 19 ~~~~~~LaT~~~~G~P~~~pv~~~~~~~-~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~--~~v~v~G~a~~v~d~~~ 95 (141)
T 2fhq_A 19 KCEVVTLASVNKEGYPRPVPMSKIAAEG-ISTIWMSTGADSLKTIDFLSNPKAGLCFQEKG--DSVALMGEVEVVTDEKL 95 (141)
T ss_dssp TCSEEEEEEECTTSCEEEEEEECCEEET-TTEEEEEEETTSHHHHHHHHCCEEEEEEEETT--EEEEEEEEEEEECCHHH
T ss_pred cCCEEEEEEECCCCCEEEEeeEEEEeCC-CCeEEEEeCCCCHHHHHHHhCCcEEEEEEeCC--CEEEEEEEEEEECCHHH
Confidence 4579999999999999999999865443 25899999999999999999999999999985 69999999999987521
Q ss_pred ChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEec
Q 028990 105 DPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNL 171 (200)
Q Consensus 105 ~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~ 171 (200)
..++|.... ..++++. .+.+++++++|.|++++||+.
T Consensus 96 -------~~~~~~~~~---------------------~~~~p~~--~~~~~~~~~~i~p~~~~~~~~ 132 (141)
T 2fhq_A 96 -------KQELWQDWF---------------------IEHFPGG--PTDPGYVLLKFTANHATYWIE 132 (141)
T ss_dssp -------HHHSCCGGG---------------------GGTCTTC--TTCTTEEEEEEEEEEEEEEET
T ss_pred -------HHHHHHHHH---------------------HHHcCCC--CCCCCEEEEEEEcCEEEEeeC
Confidence 134554321 1122111 124789999999999999987
No 20
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=99.70 E-value=3.6e-17 Score=124.75 Aligned_cols=120 Identities=10% Similarity=-0.006 Sum_probs=91.7
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC---ceEEEEE-EEEEEEc
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES---WDQFRIN-GRVDVID 100 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~---~~qiri~-G~a~~~~ 100 (200)
+.+++.|||++ +|.|++|+|.+..+..+.+.|||.|+.+|+|++||++||+|++|.+.++. ..+||++ |+|++.+
T Consensus 13 ~~~~~~LAT~~-~g~P~vR~v~f~~~~~~~~~LYF~T~~~k~k~~ql~~Np~V~i~~~~~d~~~~~~~IRi~~G~a~~~~ 91 (145)
T 3ba3_A 13 STNKIALSTAV-NNEADVKIVNFVWYEAQPDTLYFSSVKTSPALKVYDQNPDIAFITIPNDGTAGNPYLRAQHVKLQRST 91 (145)
T ss_dssp TEEEEEEEEEE-TTEEEEEEEECEECTTSTTEEEEEEETTCTHHHHHTTCCEEEEEEEECTTCTTCCEEEEEEEEEEECS
T ss_pred hCCcEEEEECC-CCCEEEEEEEEEEEecCCCEEEEEECCCCHHHHHHHhCCCEEEEEECCCCCccceEEEEEeEEEEEcC
Confidence 45789999965 89999999999755555579999999999999999999999999998765 5899999 9999975
Q ss_pred CCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEecCC
Q 028990 101 GSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNLKS 173 (200)
Q Consensus 101 ~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~~~ 173 (200)
+.. . .....+|...+ . .+.++.. ..++|.|+.|.|.++.+.+...
T Consensus 92 ~~~-~----~~k~~~~e~~P-~------------------~k~~y~~----~~~~l~vf~i~~~~a~~~~~~~ 136 (145)
T 3ba3_A 92 KTM-T----DLLPQYLETVP-N------------------YQQVWDA----IGSTLVVFELKLTDLFVDAGVG 136 (145)
T ss_dssp CCH-H----HHHHHHHHHST-T------------------HHHHHHH----HGGGEEEEEEECSEEEEECCTT
T ss_pred Cch-H----HHHHHHHHhCh-h------------------hhhcccC----CCCcEEEEEEECCEEEEECCCC
Confidence 421 1 13356777531 1 1222211 1248999999999999998533
No 21
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=99.67 E-value=9e-16 Score=117.94 Aligned_cols=77 Identities=13% Similarity=0.232 Sum_probs=67.4
Q ss_pred CCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC-------ceEEEEEEEE
Q 028990 24 KHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES-------WDQFRINGRV 96 (200)
Q Consensus 24 ~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~-------~~qiri~G~a 96 (200)
.+.++++|||+++||.|++++|.+. ++++ +.+||+|+..|+|+++|++||+|+|++.++.. .++++|.|+|
T Consensus 28 ~~~~~~~LaTv~~dG~P~~~~v~~~-~~~~-g~~~f~t~~~s~k~~nl~~np~vsl~v~~~~~~~~~~~~~~~v~i~G~a 105 (157)
T 1vl7_A 28 QEFQSAIISTISEQGIPNGSYAPFV-IDDA-KNIYIYVSGLAVHTKNIEANPLVNVLFVDDEAKTNQIFARRRLSFDCTA 105 (157)
T ss_dssp TTCSEEEEEEECTTSCEEEEEEEEE-ECTT-CCEEEEECTTSHHHHHHHHCCEEEEEEECCGGGCSSGGGCCEEEEEEEE
T ss_pred HhCCEEEEEEECCCCCEEEEEEEEE-EcCC-CCEEEEEeCccHHHHHHHhCCcEEEEEEcCccccCCcccCceEEEEEEE
Confidence 4678999999999999999999885 3432 48999999999999999999999999998642 4689999999
Q ss_pred EEEcCC
Q 028990 97 DVIDGS 102 (200)
Q Consensus 97 ~~~~~~ 102 (200)
+++++.
T Consensus 106 ~~v~~~ 111 (157)
T 1vl7_A 106 TLIERE 111 (157)
T ss_dssp EEECTT
T ss_pred EEcCCC
Confidence 999876
No 22
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.65 E-value=1.7e-15 Score=113.59 Aligned_cols=114 Identities=16% Similarity=0.147 Sum_probs=86.6
Q ss_pred CCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCC
Q 028990 23 LKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGS 102 (200)
Q Consensus 23 ~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~ 102 (200)
+.+.++++|||++++|.|++++|.+. ++++.+.|||+|+..|+|+++|++||+|+++++++ ..+++|.|+|++++|.
T Consensus 18 L~~~~~~~LaT~~~dG~P~~~pv~~~-~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~--~~~v~v~G~a~~~~d~ 94 (137)
T 2asf_A 18 LSERHLAMLTTLRADNSPHVVAVGFT-FDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDG--ARWLSLEGRAAVNSDI 94 (137)
T ss_dssp TTSSCCEEEEEECTTSCEEEEEECCE-EETTTTEEEEEEETTCHHHHHHHHHCEEEEEEEET--TEEEEEEEEEEEECCH
T ss_pred HhCCCeEEEEEECCCCCEEEEEEEEE-EECCCCEEEEEeCCCCHHHHHHhhCCeEEEEEECC--CCEEEEEEEEEEecCH
Confidence 34678999999999999999999985 56533689999999999999999999999999886 3789999999999865
Q ss_pred CCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEe
Q 028990 103 NSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLN 170 (200)
Q Consensus 103 ~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~ 170 (200)
+.. .++|... ...| + .+ .+.+.+++|+|.|+++..+.
T Consensus 95 ~~~-------~~~~~~~----~~~~--~----------------~~--~~~~~~~viri~~~~v~g~~ 131 (137)
T 2asf_A 95 DAV-------RDAELRY----AQRY--R----------------TP--RPNPRRVVIEVQIERVLGSA 131 (137)
T ss_dssp HHH-------HHHHHHH----HHHS--C----------------CC--CCCTTEEEEEEEEEEEEECT
T ss_pred HHH-------HHHHHHH----HHhc--C----------------cc--cCCCCEEEEEEEEEEEEEec
Confidence 321 1223221 0111 0 00 12467999999999998764
No 23
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=99.61 E-value=9.6e-15 Score=108.59 Aligned_cols=76 Identities=20% Similarity=0.368 Sum_probs=67.1
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC-ceEEEEEEEEEEEcCCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES-WDQFRINGRVDVIDGSN 103 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~-~~qiri~G~a~~~~~~~ 103 (200)
+.++++|||++++|.|++++|.+. +++ +.|||+|+..|+|+++|++||+|++++.++.. .++++|+|+|+.+++++
T Consensus 14 ~~~~~~LaT~~~dG~P~~~pv~~~-~d~--~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~~~~~v~v~G~a~~v~~~~ 90 (131)
T 3f7e_A 14 RPLYGHLATVRPDGTPQVNAMWFA-WDG--EVLRFTHTTKRQKYRNIKANPAVAMSVIDPDNPYRYLEVRGLVEDIVPDP 90 (131)
T ss_dssp SCCCEEEEEECTTSCEEEEEECCE-ECS--SCEEEEEETTSHHHHHHHHCCEEEEEEECSSCTTCEEEEEEEEEEEEECT
T ss_pred CCCcEEEEEECCCCCEEEEEEEEE-EEC--CEEEEEECCCCHHHHHHhhCCcEEEEEEcCCCCeeEEEEEEEEEEeccCc
Confidence 457899999999999999999875 555 48999999999999999999999999998764 68999999998887654
No 24
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=99.58 E-value=8.9e-14 Score=104.79 Aligned_cols=77 Identities=21% Similarity=0.272 Sum_probs=68.6
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGS 102 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~ 102 (200)
..++++|||++++|.|++++|.+. ++++.+.|||+|+..++|+++|++||+|+++|..+....+++|.|+|+++++.
T Consensus 16 ~~~~~~LaT~~~~G~P~~~pv~~~-~~~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~~~~v~v~G~a~~~~d~ 92 (147)
T 2aq6_A 16 GNSIGVLATIKHDGRPQLSNVQYH-FDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEGTAQLTPPA 92 (147)
T ss_dssp TCSEEEEEEECTTSCEEEEEEECE-EETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTSSCEEEEEEECEECCCC
T ss_pred cCCeEEEEEECCCCCEEEEEEEEE-EcCCCCEEEEEecCCCHHHHHHhhCCcEEEEEEcCCCcEEEEEEEEEEEcCCC
Confidence 458999999999999999999985 56543479999999999999999999999999987766789999999999886
No 25
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=99.57 E-value=2.3e-14 Score=108.37 Aligned_cols=74 Identities=18% Similarity=0.149 Sum_probs=67.0
Q ss_pred CeEEEEeeCCCCCceEEEEEEEE-EeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcCC
Q 028990 27 IYFQLATVGTNGRPSNRTVVFRG-FQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDGS 102 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~r~-~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~~ 102 (200)
++++|||++++|.|+++++.+.. .++ +.|+|.|...++|+++|++||+|+|+|+++...++++|+|+|+++++.
T Consensus 39 ~~~~LATv~~dG~P~~~p~~f~~~~d~--~~l~f~~~~~~~k~~nL~~np~V~l~~~~~~~~~~v~i~G~a~~v~d~ 113 (140)
T 2htd_A 39 NLVYLATVDADGNPQVGPKGSMTVLDP--SHLQYLEKTKGEAYENIKRGSKVALVAADVPSHTAVRVLATAEVHEDD 113 (140)
T ss_dssp SCEEEEEECTTCCEEEEEETTCEEEET--TEEEEEESSCCHHHHHHHTTCCEEEEEEETTTTEEEEEEEEEEEESSS
T ss_pred CCEEEEEECCCCCEEEecceeEEecCC--CEEEEeccCCchHHHHhhcCCeEEEEEEecCCCCEEEEEEEEEEecCh
Confidence 47899999999999999997643 344 489999999999999999999999999999888999999999999876
No 26
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.56 E-value=2.3e-14 Score=109.82 Aligned_cols=122 Identities=15% Similarity=0.204 Sum_probs=88.2
Q ss_pred CCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC---ceEEEEEEEEEEEcCC
Q 028990 26 SIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES---WDQFRINGRVDVIDGS 102 (200)
Q Consensus 26 ~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~---~~qiri~G~a~~~~~~ 102 (200)
.++++|||++++|.|++++|.+. +++ +.|||+|+..|+|+++|++||+|+++|..+.. .+.++|.|+|+++++.
T Consensus 22 ~~~~~LaT~~~~G~P~~~pv~~~-~~~--~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~~~~~~~v~~~G~a~~v~d~ 98 (162)
T 1rfe_A 22 SRTGTLATIGPDGQPHLTAMWYA-VID--GEIWLETKAKSQKAVNLRRDPRVSFLLEDGDTYDTLRGVSFEGVAEIVEEP 98 (162)
T ss_dssp CCCEEEEEECTTSCEEEEEECCE-EET--TEEEEEEETTSHHHHHHHHCCEEEEEEEECSSGGGCEEEEEEEEEEEECCH
T ss_pred CcEEEEEEECCCCCEEEEEEEEE-EEC--CEEEEEecCccHHHHHHhhCCeEEEEEEcCCCcccccEEEEEEEEEEeCCh
Confidence 47899999998999999999885 555 49999999999999999999999999998754 3689999999999875
Q ss_pred CCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEec
Q 028990 103 NSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNL 171 (200)
Q Consensus 103 ~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~ 171 (200)
+.. .++|.... ..|..+ . .+....+. + ...+.+++++|.|+++.+|+.
T Consensus 99 ~~~-------~~~~~~l~----~~~~~~---~---~~~~~~~~-~---~~~~~~~v~~i~~~~~~~~~~ 146 (162)
T 1rfe_A 99 EAL-------HRVGVSVW----ERYTGP---Y---TDECKPMV-D---QMMNKRVGVRIVARRTRSWDH 146 (162)
T ss_dssp HHH-------HHHHHHHH----HHHTCC---C---CGGGHHHH-H---HHTTTEEEEEEEEEEEEEEEG
T ss_pred HHH-------HHHHHHHH----HHhcCc---c---cchhHHHH-H---hccCceEEEEEEEEEEEEecc
Confidence 321 23444321 111100 0 00000010 0 013689999999999999987
No 27
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=99.53 E-value=6.5e-14 Score=107.39 Aligned_cols=76 Identities=9% Similarity=0.142 Sum_probs=66.3
Q ss_pred CCCCeEEEEeeCCC-CCceEEEEEEE-EEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEEcC
Q 028990 24 KHSIYFQLATVGTN-GRPSNRTVVFR-GFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVIDG 101 (200)
Q Consensus 24 ~~~~~~~LATv~~d-G~P~~R~v~~r-~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~~~ 101 (200)
.+.++++|||+++| |.|+++++.+. ..++ +.|||+|+..++|++||++||+|++++..+. ..++|+|+|+++.|
T Consensus 19 ~~~~~~~LATv~~d~G~P~~sp~~~~~~~d~--~~l~f~~~~~~~k~~nl~~np~Vsl~v~~~~--~~~~i~G~A~~v~d 94 (151)
T 2q9k_A 19 TDLPLVFLITHDQSKSWPITHAISWVYAKDE--TTIRFAIEADSLLVKTLADHPVFTLIFFADQ--STYSLTCTDVAAWE 94 (151)
T ss_dssp SSCCCEEEEECCTTSSSCEEEEECCEEEEET--TEEEEEEETTCTHHHHHHHSCCEEEEEEETT--EEEEEEEEEEEEEC
T ss_pred hcCCEEEEEEEcCCCCcEeEeeeEEEEEeCC--CEEEEEECCCcHHHHHHHhCCcEEEEEECCC--CEEEEEEEEEEEeC
Confidence 35588999999999 99999998543 4555 4999999999999999999999999999875 47999999999998
Q ss_pred CC
Q 028990 102 SN 103 (200)
Q Consensus 102 ~~ 103 (200)
..
T Consensus 95 ~~ 96 (151)
T 2q9k_A 95 TT 96 (151)
T ss_dssp CS
T ss_pred cc
Confidence 64
No 28
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=99.42 E-value=2.8e-12 Score=97.70 Aligned_cols=76 Identities=18% Similarity=0.236 Sum_probs=65.7
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC-------ceEEEEEEEEE
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES-------WDQFRINGRVD 97 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~-------~~qiri~G~a~ 97 (200)
+.++++|||+++||.|++.+|.+. ++++ .+||+|+..|+|.++|++||+|++++..+.. ..-+.+.|+|+
T Consensus 13 ~~~~~~LaT~~~~G~P~~s~v~~~-~~~~--~~~~~~s~~~~~~~nl~~~prvsl~v~~~~~~~~~~~~~~rltl~G~a~ 89 (148)
T 3tgv_A 13 ERKTLQLATVDAQGRPNVSYAPFV-QNQE--GYFVLISHIARHARNLEVNPQVSIMMIEDETEAKQLFARKRLTFDAVAS 89 (148)
T ss_dssp HCCEEEEEEECTTCCEEEEEEEEE-EETT--EEEEEEETTSHHHHHHHHSCEEEEEEECCGGGCSCGGGCCEEEEEEEEE
T ss_pred hCCEEEEEEECCCCCEEEEEEEEE-EECC--EEEEEECCccHHHHHHHhCCCeEEEEecCcccccCcccceEEEEeeeEE
Confidence 347899999999999999999884 5554 8999999999999999999999999987643 24699999999
Q ss_pred EEcCCC
Q 028990 98 VIDGSN 103 (200)
Q Consensus 98 ~~~~~~ 103 (200)
.+.+.+
T Consensus 90 ~v~~~~ 95 (148)
T 3tgv_A 90 MVERDS 95 (148)
T ss_dssp EECTTS
T ss_pred EcCCCc
Confidence 998764
No 29
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=99.36 E-value=6.8e-12 Score=95.19 Aligned_cols=110 Identities=9% Similarity=-0.020 Sum_probs=80.4
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeC--CCCEEEEEecCCCcchhhhhcCCcEEEEEEECC--CceEEEEEEEEEEEc
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQD--NTDKIQINSDTRSRKIEELKSCPFSEICWYFTE--SWDQFRINGRVDVID 100 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~--~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~--~~~qiri~G~a~~~~ 100 (200)
+..++.|||++ +|.|+++||.+. ++. +.+.|||+|. .++|+++|++||+|++++.... ....|.+.|+|++++
T Consensus 26 ~~~~~~Lat~~-dg~P~v~Pv~f~-~~~~~~~~~lyf~ta-~~~K~~~l~~np~V~~~v~~~~~~~~~sV~v~G~a~~v~ 102 (148)
T 3cp3_A 26 SESVGRLVVHR-KDDLDIFPVNFV-LDYSAEQPRVYFRTA-EGTKLFSVNLNSDVLFEVDRFDDAEGWSVVLKGNAYVVR 102 (148)
T ss_dssp TCSEEEEEEEE-TTEEEEEEEEEE-EECSSSSCEEEEEEC---CCSSCTTSCSEEEEEEEECC--CEEEEEEEEEEEECC
T ss_pred cCCEEEEEEEe-CCEEEEEEEEEE-EEecCCCCEEEEEcC-CCchHHHHhcCCcEEEEEEECCCCCCeEEEEEEEEEEEC
Confidence 45899999996 899999999984 441 1359999999 9999999999999999998732 346899999999998
Q ss_pred CCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEec
Q 028990 101 GSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNL 171 (200)
Q Consensus 101 ~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~ 171 (200)
+.+.. .++|... .+.|. +.+..++|+|.|+++.-...
T Consensus 103 d~~e~-------~~~l~~~---------------------~~~~~------~~~~~~viri~~~~~tgk~~ 139 (148)
T 3cp3_A 103 DTEEA-------RHADTLG---------------------LKPWL------PTLKYNFVRIDVREVSGRAF 139 (148)
T ss_dssp CHHHH-------HHHTTSC---------------------CCCCC------TTCCCEEEEEEEEEEEEEEE
T ss_pred CHHHH-------HHHHhcc---------------------ccccC------CCCceEEEEEEeEEEEEEEc
Confidence 75321 2344331 11222 12578999999999976543
No 30
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=99.36 E-value=4.2e-12 Score=104.13 Aligned_cols=115 Identities=12% Similarity=0.109 Sum_probs=84.4
Q ss_pred CCeEEEEeeCC--CCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC-----ceEEEEEEEEEE
Q 028990 26 SIYFQLATVGT--NGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES-----WDQFRINGRVDV 98 (200)
Q Consensus 26 ~~~~~LATv~~--dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~-----~~qiri~G~a~~ 98 (200)
.++++|||+++ +|.|++.+|.+. ++++ +.+||+|...+.|+++|++||+|++++..+.. ...++|.|+|++
T Consensus 19 ~~~~~LaT~~~~~dG~P~~s~v~~~-~d~~-g~~~f~~s~~s~k~~nl~~nprvsl~v~~~~~~~~~~~~~v~l~G~a~~ 96 (247)
T 2arz_A 19 EYRAVLSTHSKKWPGFPFGSVVPYC-LDAE-GRPLILISRIAQHTHNLQADPRCSMLVGERGAEDIQAVGRLTLLAEARQ 96 (247)
T ss_dssp CSEEEEEEECSSSTTCEEEEEEECE-ECTT-SCEEEEEETTSHHHHHHHHCCEEEEEEECTTCSSTTSSCEEEEEEEEEE
T ss_pred CCEEEEEEcCCCCCCcceEEEEEEE-ECCC-CCEEEEEeChhHHHHHHHhCCCeEEEEecCCCCChhhCceEEEEEEEEE
Confidence 47899999998 899999999774 4443 46999999999999999999999999987652 248999999999
Q ss_pred EcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEec
Q 028990 99 IDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNL 171 (200)
Q Consensus 99 ~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~ 171 (200)
+++.+ .+ .|. ..|....|. .+.+. +.++|.+++|.|+++.|+.+
T Consensus 97 v~d~e-~~--------~~~-------~~~~~~~P~-------~~~~~------~~~~~~l~rl~~~~~~~~~g 140 (247)
T 2arz_A 97 LAEEE-VA--------AAA-------ERYYRYFPE-------SADYH------RVHDFDFWVLQPVQWRFIGG 140 (247)
T ss_dssp CCHHH-HH--------HHH-------HHHHHHCGG-------GTTCB------TTBBEEEEEEEEEEEEEECT
T ss_pred CCcHH-HH--------HHH-------HHHHHHCcC-------hhhcc------cccCcEEEEEEEEEEEEEcC
Confidence 98532 11 111 111111111 01111 23689999999999999986
No 31
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=99.23 E-value=4.7e-10 Score=92.58 Aligned_cols=119 Identities=16% Similarity=0.107 Sum_probs=85.4
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCC-cEEEEEEECCC-------ceEEEEEEEE
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCP-FSEICWYFTES-------WDQFRINGRV 96 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np-~v~l~~~~~~~-------~~qiri~G~a 96 (200)
..++++|||++++|.|++.+|.+. .++ +.+||++...+.|.+||++|| +|+|++..++. ...++|.|+|
T Consensus 97 ~~~~~~LAT~~~dG~P~~s~v~~~-~~~--g~~~~~~s~~a~h~~NL~~nP~rvSl~v~e~e~~~~~~~~~~rltl~G~a 173 (251)
T 3swj_A 97 SFNSVALATLNANGEVVCSYAPFV-STQ--WGNYIYISEVSEHFNNIKVNPNNIEIMFLEDESKAASVILRKRLRYRVNA 173 (251)
T ss_dssp TCSEEEEEEECTTSCEEEEEEEEE-EET--TEEEEEEETTSHHHHHHHHSTTCEEEEEECCTTTSSCTTCCCEEEEEEEE
T ss_pred hCCEEEEEEECCCCCEEEEEEEEE-EEC--CEEEEEEeCchHHHHHHHhCCCeEEEEEEcCcccccCccccceEEEEEEE
Confidence 458999999999999999999885 444 489999999999999999999 99999986542 4679999999
Q ss_pred EEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEec
Q 028990 97 DVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNL 171 (200)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~ 171 (200)
+++++++ + |.. .+..|....|+..+ .+.+ .+.+.|.+++|.|+++-|..+
T Consensus 174 ~~v~~~~--e---------~~~----~~~~~~~k~p~a~~----~~~~------~~~~Df~l~rl~p~~~r~v~G 223 (251)
T 3swj_A 174 SFLERGE--R---------FDQ----IYDEFEKQTGGEGG----IKTI------RKMLDFHLVKLEFKKGRFVKG 223 (251)
T ss_dssp EECCSSH--H---------HHH----HHHHHHHHHCSTTT----HHHH------HTCTTEEEEEEEEEEEEEEEE
T ss_pred EEecChh--H---------HHH----HHHHHHHHCCCchh----hhhc------CcccCEEEEEEEeeEEEEECC
Confidence 9998741 1 111 11111111111100 0011 124799999999999988765
No 32
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=99.19 E-value=8.7e-11 Score=88.91 Aligned_cols=73 Identities=18% Similarity=0.276 Sum_probs=62.7
Q ss_pred CCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC---ceEEEEEEEEEEEcCC
Q 028990 26 SIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES---WDQFRINGRVDVIDGS 102 (200)
Q Consensus 26 ~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~---~~qiri~G~a~~~~~~ 102 (200)
.++++|||++ +|.|+++||.+ .+++ +.|||+| ..++|+++|++||+|++++..... .+.+.+.|+|+++++.
T Consensus 19 ~~~~~Lat~~-~g~P~~~pv~~-~~~~--~~l~~~t-~~~~k~~~l~~~p~V~~~v~~~~~~~~y~sV~v~G~a~~v~d~ 93 (149)
T 2hq9_A 19 NRVGRLACAK-DGQPYVVPLYY-AYSD--AHLYAFS-MPGKKIEWMRANPRVSVQVDEHGQGRGWKSVVVDGRYEELPDL 93 (149)
T ss_dssp CCEEEEEEEE-TTEEEEEEEEC-EEET--TEEEEEE-CSSHHHHHHHHCCEEEEEEEEECSTTCEEEEEEEEEEEECCSC
T ss_pred CCEEEEEEcc-CCeEEEEEEEE-EEEC--CEEEEEe-CccHHHHHHhcCCcEEEEEEecCCCCcEEEEEEEEEEEEEcCc
Confidence 4789999998 89999999998 4565 4899998 689999999999999999987543 2459999999999876
Q ss_pred C
Q 028990 103 N 103 (200)
Q Consensus 103 ~ 103 (200)
+
T Consensus 94 ~ 94 (149)
T 2hq9_A 94 I 94 (149)
T ss_dssp G
T ss_pred c
Confidence 5
No 33
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=99.19 E-value=1.4e-10 Score=91.10 Aligned_cols=73 Identities=15% Similarity=0.158 Sum_probs=63.2
Q ss_pred CCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEEC----C---------CceEEEE
Q 028990 26 SIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFT----E---------SWDQFRI 92 (200)
Q Consensus 26 ~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~----~---------~~~qiri 92 (200)
..+++|||++ +|.|++.||.+ .+++ +.|||+|...++|+++|++||+|++++..+ . ..+.|.+
T Consensus 25 ~~~~~Lat~~-~g~P~~~Pv~f-~~~~--~~ly~hta~~~~k~~~l~~np~V~~~v~~~~~~~~~~v~~~~t~~y~sV~v 100 (185)
T 2hti_A 25 ARTGFLGLST-NDQPYVIPLNF-VWHN--HAIYFHGASEGRKIKMIEANPEVCFTICEDLGTIVSPVPAHTDTAYMSVII 100 (185)
T ss_dssp CCCEEEEEEE-TTEEEEEEECC-EEET--TEEEEEEESSSHHHHHHHHCCEEEEEEEECC-------------CEEEEEE
T ss_pred CCEEEEEEee-CCEEEEEEEEE-EEEC--CEEEEEeCCcCHHHHHhhcCCeEEEEEEeccccccccccccCcceEEEEEE
Confidence 4789999999 67999999988 4555 499999999999999999999999999987 4 2356999
Q ss_pred EEEEEEEcCC
Q 028990 93 NGRVDVIDGS 102 (200)
Q Consensus 93 ~G~a~~~~~~ 102 (200)
.|+|++++|.
T Consensus 101 ~G~a~~v~d~ 110 (185)
T 2hti_A 101 FGTIEPVSAI 110 (185)
T ss_dssp EEEEEECCCH
T ss_pred EEEEEEECCH
Confidence 9999999875
No 34
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.19 E-value=1.2e-10 Score=91.02 Aligned_cols=74 Identities=18% Similarity=0.271 Sum_probs=64.5
Q ss_pred CCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC---------------ceEE
Q 028990 26 SIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES---------------WDQF 90 (200)
Q Consensus 26 ~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~---------------~~qi 90 (200)
..+++|||++++|.|++++|.+ .++++ .|||+|...++|+++|++||+|++++..+.. .+.|
T Consensus 38 ~~~~~Lat~~~dg~P~v~Pv~f-~~~~~--~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~is~~~~~~~~~t~~y~sV 114 (178)
T 2fg9_A 38 ADACFVGITDLEGNPYVVPMNF-GYEND--TLYLHSGPEGGKIEMLQRNNNVCITFSLGHKLVYQHKQVACSYSMRSESA 114 (178)
T ss_dssp CSCEEEEEECTTSCEEEEEECC-EEETT--EEEEEECSCSHHHHHHHHCCEEEEEEECCCEEEEEC----CEEEEEEEEE
T ss_pred CCEEEEEEECCCCcEEEEEEEE-EEECC--EEEEEcCCcchHHHHhhcCCcEEEEEEeCCceeeccCCCCCCCcccEEEE
Confidence 4789999999899999999988 45554 9999999999999999999999999987653 2457
Q ss_pred EEEEEEEEEcCC
Q 028990 91 RINGRVDVIDGS 102 (200)
Q Consensus 91 ri~G~a~~~~~~ 102 (200)
.+.|+|++++|.
T Consensus 115 ~v~G~a~~v~d~ 126 (178)
T 2fg9_A 115 MCRGKVEFIEDM 126 (178)
T ss_dssp EEEEECEEECSH
T ss_pred EEEEEEEEECCH
Confidence 899999999875
No 35
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=99.12 E-value=1.8e-10 Score=90.54 Aligned_cols=116 Identities=16% Similarity=0.202 Sum_probs=83.5
Q ss_pred CCeEEEEeeCC----CCCceEEEEEEEEEe---CCCCEEEEEecCCCcchhhhhcCCcEEEEEEE------------CCC
Q 028990 26 SIYFQLATVGT----NGRPSNRTVVFRGFQ---DNTDKIQINSDTRSRKIEELKSCPFSEICWYF------------TES 86 (200)
Q Consensus 26 ~~~~~LATv~~----dG~P~~R~v~~r~~~---~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~------------~~~ 86 (200)
.++++|||++. +|.|.+-+|.+. +. ++.+.+||++...+.|+++|++||+|+|++.. +..
T Consensus 30 ~~~g~LaTi~~~~~~dG~P~~s~v~~~-~~~~~d~~g~~~f~~s~~~~~~~nl~~nprvSl~v~~~~~~~~~~~~~dp~~ 108 (184)
T 1xhn_A 30 SDWGALATISTLEAVRGRPFADVLSLS-DGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTMTLAQTNFCKKHGFDPQS 108 (184)
T ss_dssp CSEEEEEEECCCGGGTTCEEEEEEECB-SCSTTCCCSCCEEEECTTSHHHHHHHHCCEEEEEEEGGGTTHHHHHTCCTTS
T ss_pred CCEEEEEecccCCCCCCcceEEEEEEE-eccCcCCCCCEEEEEeCccHhHHHHhhCCCEEEEEecCCCccccccCCCCcc
Confidence 47899999997 899999999873 20 22368999999999999999999999999984 233
Q ss_pred --ceEEEEEEEEEEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeec
Q 028990 87 --WDQFRINGRVDVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPD 164 (200)
Q Consensus 87 --~~qiri~G~a~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~ 164 (200)
...++|.|+|+.+++++.+ ..+..|....|. .+.+. +.++|.+++|.|+
T Consensus 109 ~~~~rvtl~G~a~~v~d~e~~----------------~~~~~~~~~hP~-------~~~~~------~~~~~~~~~l~i~ 159 (184)
T 1xhn_A 109 PLCVHIMLSGTVTKVNETEMD----------------IAKHSLFIRHPE-------MKTWP------SSHNWFFAKLNIT 159 (184)
T ss_dssp TTSCEEEEEEEEEECCGGGHH----------------HHHHHHHHHCGG-------GGGSC------GGGCCEEEEEEEE
T ss_pred ccCceEEEEEEEEECChHHHH----------------HHHHHHHHHCcC-------hhHcc------cCCCEEEEEEEEe
Confidence 5679999999999864211 112222211111 11111 1358999999999
Q ss_pred EEEeEec
Q 028990 165 QVDYLNL 171 (200)
Q Consensus 165 ~ve~~~~ 171 (200)
++-|..+
T Consensus 160 ~i~~v~g 166 (184)
T 1xhn_A 160 NIWVLDY 166 (184)
T ss_dssp EEEEECS
T ss_pred EEEEEcc
Confidence 9987765
No 36
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=99.04 E-value=4.3e-10 Score=93.09 Aligned_cols=116 Identities=13% Similarity=0.078 Sum_probs=85.4
Q ss_pred CCCeEEEEeeC-CCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC-----ceEEEEEEEEEE
Q 028990 25 HSIYFQLATVG-TNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES-----WDQFRINGRVDV 98 (200)
Q Consensus 25 ~~~~~~LATv~-~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~-----~~qiri~G~a~~ 98 (200)
..++++|||++ .+|.|++.+|.+. ++++ +.++|++...+.|.+||++||+|++++..+.. ...+.|.|+++.
T Consensus 38 ~~~~g~LaTv~~~dG~P~~s~v~y~-~d~~-g~~~~~~s~~~~h~~NL~~dprvSl~V~~~~~~d~~~~~rvtl~G~a~~ 115 (258)
T 3dnh_A 38 TSRTAALATLDPVSGYPYTTATNIG-IEPD-GTPFFFAAGLTLHARNMETDARISVTLAPFGKGDALTLPRLTLVGRADR 115 (258)
T ss_dssp HCCEEEEEEECTTTCCEEEEEEECE-ECTT-SCEEEEEETTSHHHHHHHHCCEEEEEECCGGGSCGGGSCEEEEEEEEEE
T ss_pred hCCEEEEEeccCCCCceEEEEEEEE-ECCC-CCEEEEEeCCcHHHHHHhhCCCEEEEEecCCCCChhhCCeEEEEEEEEE
Confidence 35899999999 8999999999884 5533 57889999999999999999999999987642 357999999999
Q ss_pred EcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEec
Q 028990 99 IDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNL 171 (200)
Q Consensus 99 ~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~ 171 (200)
+++++.. ..+..|....|.. +.+. ..++|.+++|.|+++-|..+
T Consensus 116 v~~~e~~----------------~l~~~y~~rhP~a-------~~~~------~~~df~l~rl~~~~v~~v~G 159 (258)
T 3dnh_A 116 IGPDEVP----------------LAIARYIARYPKA-------KLYL------SLPDTRLYRLRTEGVQINGG 159 (258)
T ss_dssp CCGGGHH----------------HHHHHHHHHCTTH-------HHHT------SSTTEEEEEEEEEEEEEEC-
T ss_pred cCchHHH----------------HHHHHHHHHCcCh-------HHcc------cCCCeEEEEEEEeEEEEEcc
Confidence 9875311 1233333222111 1111 13689999999999988764
No 37
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=99.02 E-value=7.4e-10 Score=84.18 Aligned_cols=73 Identities=21% Similarity=0.260 Sum_probs=61.7
Q ss_pred CCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC---ceEEEEEEEEEEEcCC
Q 028990 26 SIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES---WDQFRINGRVDVIDGS 102 (200)
Q Consensus 26 ~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~---~~qiri~G~a~~~~~~ 102 (200)
..++.|||++ ||.|++.||.+. ++++ .|||+|. .++|+++|++||+|++++..... .+.+.+.|+|++++|.
T Consensus 22 ~~~~~Lat~~-dg~P~~~Pv~~~-~~~~--~ly~~~~-~g~K~~~l~~np~V~~~v~~~~~~~~y~sV~v~G~a~~v~d~ 96 (148)
T 3u5w_A 22 KHVGRLGYVV-DDRPIIVPMTFR-FSGG--SFYSFTT-DGQKTNAMRKNDAICILFDQIESQTKWRTVLVQGRYREIARE 96 (148)
T ss_dssp CCEEEEEEEE-TTEEEEEEEECE-EETT--EEEEEEC-CHHHHHHHHHCCEEEEEEEEESSSSSEEEEEEEEEEEECCGG
T ss_pred CCEEEEEEcc-CCcEEEEEEEEE-EECC--EEEEEEC-CchhHHHHhcCCcEEEEEEecCCCCcEEEEEEEEEEEEeCCH
Confidence 4789999995 899999999884 5654 9999995 68999999999999999986432 2469999999999876
Q ss_pred C
Q 028990 103 N 103 (200)
Q Consensus 103 ~ 103 (200)
+
T Consensus 97 ~ 97 (148)
T 3u5w_A 97 D 97 (148)
T ss_dssp G
T ss_pred H
Confidence 3
No 38
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=99.01 E-value=1.8e-08 Score=83.49 Aligned_cols=119 Identities=17% Similarity=0.174 Sum_probs=85.7
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCC-cEEEEEEECCC-------ceEEEEEEEE
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCP-FSEICWYFTES-------WDQFRINGRV 96 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np-~v~l~~~~~~~-------~~qiri~G~a 96 (200)
..++++|||++++|.|++.+|.+- .+++ .+||+++.-+.|.++|++|| +|+|++..++. .+-+++.|+|
T Consensus 97 ~~~~~~LAT~~~~G~P~~S~v~f~-~~~g--~~~iliS~lA~Ht~NL~~np~rvSllviede~~~~~~~a~~Rlt~~g~A 173 (259)
T 3gas_A 97 GFDSVCLATLHPNGHVVCSYAPLM-SDGK--QYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESKAKSAILRKRLRYKTNT 173 (259)
T ss_dssp TCSEEEEEEECTTSCEEEEEEEEE-EETT--EEEEEEETTSHHHHHHHHSTTSEEEEEECCTTTSSBTTBCCEEEEEEEE
T ss_pred hCCEEEEEeeCcCCCEEEEEEEEE-EECC--EEEEEEeCchHHHHHHHhCCCeEEEEEEeCccccCChhhcCeEEEEEEE
Confidence 458999999999999999999885 4444 89999999999999999999 99999986542 3679999999
Q ss_pred EEEcCCCCChhhhhhhhhhhhcCCHhHHhcccCCCCCCcCCCCCCCccCCCCCCCCCCCeEEEEEeecEEEeEec
Q 028990 97 DVIDGSNSDPEKLQIREKSWFGCSMKARLQYLDPEQGCPSVNEQPKEFSLDPCAGPVDAFCVLILDPDQVDYLNL 171 (200)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~W~~~~~~~r~~~~~~~pg~~~~~~~~~~~~~~~~~~~~~~f~v~~i~p~~ve~~~~ 171 (200)
++++++ .. |.. .+..|....|...+ .+.+. +-+.|.+++|+|.++.|..+
T Consensus 174 ~~v~~~--~~---------~~~----~~~~~~~r~p~~~~----~~~~~------~~~DF~l~rl~p~~~r~v~G 223 (259)
T 3gas_A 174 RFIERG--AE---------FDK----AFDSFIEKTGGAGG----IKTIR------AMQDFHLIALDFKEGRFVKG 223 (259)
T ss_dssp EEECSS--HH---------HHH----HHHHHHHHHCSTTT----HHHHH------TCTTEEEEEEEEEEEEEEEE
T ss_pred EECCCc--hH---------HHH----HHHHHHHHcCCchh----hHhcc------cCCCeEEEEEEEeEEEEEcc
Confidence 999874 11 211 12222111111000 01111 13689999999999998876
No 39
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=99.01 E-value=1.9e-09 Score=81.19 Aligned_cols=74 Identities=7% Similarity=-0.078 Sum_probs=55.4
Q ss_pred CCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEEC--CCceEEEEEEEEEEEcCC
Q 028990 25 HSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFT--ESWDQFRINGRVDVIDGS 102 (200)
Q Consensus 25 ~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~--~~~~qiri~G~a~~~~~~ 102 (200)
...++.|||++ +|.|++-||.+. ++++ .|||+|.. ..|..+|++||+|+++.... .....+.+.|+|++++|.
T Consensus 20 ~~~~g~La~~~-dg~P~vvPv~f~-~~~~--~iyfh~a~-g~K~~~i~~~~~V~f~vd~~~~~~~~SV~v~G~a~~v~d~ 94 (138)
T 3fkh_A 20 SVSLGRVVVRR-SDEMDIFPVNFI-VDKG--AIYIRTAE-GNKLFSMNLNHDVLFEADEVKDGKAWSVVVRATAEIVRKL 94 (138)
T ss_dssp TCSEEEEEEEE-TTEEEEEEEEEE-EETT--EEEEEEEC---------CCSEEEEEEEEEETTEEEEEEEEEEEEECCSH
T ss_pred cCCEEEEEEee-CCEEEEEEEEEE-EECC--EEEEEeCC-ChHHHHhhcCCCEEEEEEECCCCCCEEEEEEEEEEEECCH
Confidence 45799999998 999999999984 6664 89999988 55999999999999999753 333478999999999876
Q ss_pred C
Q 028990 103 N 103 (200)
Q Consensus 103 ~ 103 (200)
+
T Consensus 95 ~ 95 (138)
T 3fkh_A 95 D 95 (138)
T ss_dssp H
T ss_pred H
Confidence 4
No 40
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=99.00 E-value=7.8e-10 Score=88.68 Aligned_cols=73 Identities=18% Similarity=0.206 Sum_probs=63.7
Q ss_pred CCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC-------------ceEEEE
Q 028990 26 SIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES-------------WDQFRI 92 (200)
Q Consensus 26 ~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~-------------~~qiri 92 (200)
..+++|||++ +|.|++++|.+. +++ +.|||+|...++|+++|++||+|++++..+.. .+.|.+
T Consensus 32 ~~~~~Lat~~-dg~P~v~Pv~f~-~~~--~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~v~~~~~~~~t~~y~sV~v 107 (209)
T 2fur_A 32 NFTCTVSFID-GGIPYAIPMMLA-SEG--KTIYLHGSMKSRIYGILKTGQLIAISLLEINGIVLAKEIKNNSINYVSALI 107 (209)
T ss_dssp CSEEEEEEEE-TTEEEEEEEECE-EET--TEEEEEEETTSHHHHHHHTTCCEEEEEEEEEEEEECSBGGGCEEEEEEEEE
T ss_pred CCEEEEEEcc-CCEEEEEEEEEE-EEC--CEEEEEeCCcCHHHHHhhcCCeEEEEEEcCCeeecCCCCCCCccEEEEEEE
Confidence 4789999999 899999999884 555 49999999999999999999999999977532 356999
Q ss_pred EEEEEEEcCC
Q 028990 93 NGRVDVIDGS 102 (200)
Q Consensus 93 ~G~a~~~~~~ 102 (200)
.|+|++++|.
T Consensus 108 ~G~a~~v~d~ 117 (209)
T 2fur_A 108 FGRPYEIDDT 117 (209)
T ss_dssp EECCEECCCH
T ss_pred EEEEEEECCH
Confidence 9999999875
No 41
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=98.91 E-value=3.6e-09 Score=85.36 Aligned_cols=76 Identities=8% Similarity=0.081 Sum_probs=64.2
Q ss_pred CCCeEEEEeeC----CCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC-------------c
Q 028990 25 HSIYFQLATVG----TNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES-------------W 87 (200)
Q Consensus 25 ~~~~~~LATv~----~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~-------------~ 87 (200)
...+++|||++ ++|.|++++|.+. ++++...|||+|...++|+++|++||+|+++|..+.. .
T Consensus 54 ~~~~~~Lat~~~~~~~dg~P~v~Pv~f~-~d~~~~~Lyfhta~~~~K~~~l~~np~V~~~v~~~~~~v~~~~~~~~t~~y 132 (216)
T 2vpa_A 54 RGTIARVATLWQGEDGAAFPFITPLAYA-YRPEQGDLVYHTNVVGRLRANAGQGHPATLEVSEIGQFLPSNSPLELSVQY 132 (216)
T ss_dssp HCCEEEEEEEEECTTSCEEEEEEEEECE-EETTTTEEEEECCCCCSSBSSCSSEEEEEEEEEEEEEEECCSSGGGCEEEE
T ss_pred hCCEEEEEEccCCCCCCCceEEEEEEEE-EECCeeEEEEEecCcCHHHHHhccCCcEEEEEEeCCeeccCccCCCCcccE
Confidence 34789999998 6899999999884 5655334999999999999999999999999976532 3
Q ss_pred eEEEEEEEEEEEcCC
Q 028990 88 DQFRINGRVDVIDGS 102 (200)
Q Consensus 88 ~qiri~G~a~~~~~~ 102 (200)
+.|.+.|+|+++ +.
T Consensus 133 ~sV~v~G~a~~v-d~ 146 (216)
T 2vpa_A 133 RSVMVFGTARVL-AG 146 (216)
T ss_dssp EEEEEEEEEEEC-CH
T ss_pred EEEEEEEEEEEE-CH
Confidence 679999999999 65
No 42
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=98.84 E-value=7.8e-09 Score=76.17 Aligned_cols=74 Identities=11% Similarity=0.064 Sum_probs=61.9
Q ss_pred CCeEEEEeeCCCCCceEEEEE---EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC------CceEEEEEEEE
Q 028990 26 SIYFQLATVGTNGRPSNRTVV---FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE------SWDQFRINGRV 96 (200)
Q Consensus 26 ~~~~~LATv~~dG~P~~R~v~---~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~------~~~qiri~G~a 96 (200)
...+.|||++ +|.||+-+.+ ++-.++ +.|++..+....-.+||++||+|+++++..+ ....++|+|+|
T Consensus 13 ~~~~~iaT~~-~g~Pnvvptw~~~~~v~dD--~~ili~~~~~~kT~~Nl~~N~kvai~v~~~e~~g~~g~~~gf~ikGta 89 (122)
T 3a6r_A 13 QGVVAIATQG-EDGPHLVNTWNSYLKVLDG--NRIVVPVGGMHKTEANVARDERVLMTLGSRKVAGRNGPGTGFLIRGSA 89 (122)
T ss_dssp CCEEEEEEEC-SSSEEEEEEEGGGCEEETT--TEEEEEESSCHHHHHHHHHCCEEEEEEEEEEEECSSSEEEEEEEEEEE
T ss_pred CCeEEEEEcC-CCCCcEEeeeceEEEEecC--CEEEEEccccHHHHHHHhhCCeEEEEEEecccccccCCCceEEEEEEE
Confidence 3678899999 9999998832 333444 4899988888888999999999999999775 55789999999
Q ss_pred EEEcCC
Q 028990 97 DVIDGS 102 (200)
Q Consensus 97 ~~~~~~ 102 (200)
+++++.
T Consensus 90 ~~~~~G 95 (122)
T 3a6r_A 90 AFRTDG 95 (122)
T ss_dssp EEESSS
T ss_pred EEEecc
Confidence 999987
No 43
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=98.67 E-value=5.3e-08 Score=73.75 Aligned_cols=75 Identities=16% Similarity=0.058 Sum_probs=57.1
Q ss_pred CeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEE---ECCCceEEEEEEEEEEE-cCC
Q 028990 27 IYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWY---FTESWDQFRINGRVDVI-DGS 102 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~---~~~~~~qiri~G~a~~~-~~~ 102 (200)
..+.|||++.||.|++-++..-.+.++ +.|+|.-+....-.+||++||+|+++|+ .+...+++||+++...+ ++.
T Consensus 31 ~~~~LATAdkdG~PNVa~~~~~~~~Dd-~tI~iad~f~~kT~~NL~eNP~aav~~~~~~~~~~~KG~Rl~l~~~e~~t~G 109 (148)
T 3in6_A 31 ISTTLSTVDRNYEVNIAVISVLEMIGD-DTIICARFGADKTYANLKETGKGVFMVLLTDNDKSKDGIRVYVELSADLQEG 109 (148)
T ss_dssp SSEEEEEECTTCCEEEEECCCEEEETT-TEEEEEESSCHHHHHHHHHHCEEEEEEEEESSSCEEEEEEEEEEEEEEESSS
T ss_pred ceEEEEEcCCCCCccEEEEeeeEEecC-CEEEEEeccchhHHHHHHhCCcEEEEEEEcCCCCccceEEEEEEEEEEecCc
Confidence 468999999999999999875444444 4676655555556899999999999999 66667789998865444 444
No 44
>2ol5_A PAI 2 protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.50A {Geobacillus stearothermophilus}
Probab=97.50 E-value=0.00051 Score=54.40 Aligned_cols=74 Identities=5% Similarity=0.085 Sum_probs=59.3
Q ss_pred CCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC-----------------Cce
Q 028990 26 SIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE-----------------SWD 88 (200)
Q Consensus 26 ~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~-----------------~~~ 88 (200)
..+++|+|++ +|.|.+-++.|- ++++...||||..+.++|++.|.. ++|+++|..+. ..+
T Consensus 22 ~~~g~L~~~~-~~~py~~plpf~-~~~~~~~Ly~H~A~~n~k~~~l~~-~~V~~~~~g~~~yisps~y~~~~~vpT~nY~ 98 (202)
T 2ol5_A 22 NSFATLVSMH-QRELFATHLPLL-LDREKTCLYGHFARSNPQWNDIQH-QTVLAIFHGPHCYISPSWYETNQAVPTWNYV 98 (202)
T ss_dssp SCEEEEEEEE-TTEEEEEEEECE-ECTTSSEEEEEEETTSGGGGGCTT-SCEEEEEEEEEEEECGGGSSCSCCCCEEEEE
T ss_pred CCEEEEEEcc-CCccEEEEeeEE-EECCCCEEEEEECCcChHHHhhCC-CCEEEEEEcCCEEechhhcccCCCCCCcceE
Confidence 4789999998 567999988773 444324899999999999999999 99999986431 125
Q ss_pred EEEEEEEEEEEcCC
Q 028990 89 QFRINGRVDVIDGS 102 (200)
Q Consensus 89 qiri~G~a~~~~~~ 102 (200)
-|.+.|++++++|+
T Consensus 99 SV~~~G~~~~v~D~ 112 (202)
T 2ol5_A 99 AVHVYGNVELINDQ 112 (202)
T ss_dssp EEEEEEEEEECCCH
T ss_pred EEEEEEEEEEECCH
Confidence 68999999999864
No 45
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=96.67 E-value=0.0034 Score=45.82 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=53.4
Q ss_pred CCCeEEEEeeCC-CCCceEEEEEEEEEeCCCCEEEEEecC-----CCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEE
Q 028990 25 HSIYFQLATVGT-NGRPSNRTVVFRGFQDNTDKIQINSDT-----RSRKIEELKSCPFSEICWYFTESWDQFRINGRVDV 98 (200)
Q Consensus 25 ~~~~~~LATv~~-dG~P~~R~v~~r~~~~~~~~l~F~Td~-----~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~ 98 (200)
...++.|.|++. +|.|+.-+|.+.. +++ .+++.... .+..++||.+||.|+|..- . -++.++|.+
T Consensus 14 g~p~~~Ltt~GRkSG~pr~tPv~~~~-~g~--~~~vvas~~G~~~~p~W~~Nl~A~P~v~v~~~----~--~~~~~~A~~ 84 (122)
T 3r5l_A 14 KIPVALLTTTGRKTGQPRVNPLYFLR-DGG--RVIVAASKGGAEKNPMWYLNLKANPKVQVQIK----K--EVLDLTARD 84 (122)
T ss_dssp SCCCEEEEEECTTTCSEEEEEEEEEE-ETT--EEEEECSCCGGGCSCHHHHHHHHCCEEEEEET----T--EEEEEEEEE
T ss_pred CCcEEEEEEcCCCCCCEEEEEEEEEE-ECC--EEEEEEecCCCCCCCHHHHhhccCCcEEEEEC----C--EEEEEEEEE
Confidence 457899999985 7999999998743 343 77766442 4567999999999999762 1 267888998
Q ss_pred EcCCCC
Q 028990 99 IDGSNS 104 (200)
Q Consensus 99 ~~~~~~ 104 (200)
+++++.
T Consensus 85 l~~~Er 90 (122)
T 3r5l_A 85 ATDEER 90 (122)
T ss_dssp CCHHHH
T ss_pred CCcchH
Confidence 886543
No 46
>3h96_A F420-H2 dependent reductase A; pnpox, flavin, aflatoxin, flavoprotein; 2.00A {Mycobacterium smegmatis str}
Probab=93.90 E-value=0.097 Score=39.07 Aligned_cols=94 Identities=13% Similarity=0.199 Sum_probs=60.3
Q ss_pred ChhHHHHHHHHHHhcCC-----CCCCCeEEEEeeCC-CCCceEEEEEEEEEeCCCCEEEEE-ec----CCCcchhhhhcC
Q 028990 6 TAPWKQLLLQALESQSH-----LKHSIYFQLATVGT-NGRPSNRTVVFRGFQDNTDKIQIN-SD----TRSRKIEELKSC 74 (200)
Q Consensus 6 ~~~w~~~l~~~~~~~~~-----~~~~~~~~LATv~~-dG~P~~R~v~~r~~~~~~~~l~F~-Td----~~S~K~~~i~~n 74 (200)
+..|..-..+....+++ .....++.|.|++. .|.|+.-+|.+...+.+.+.+++. +. ..+.=++||.+|
T Consensus 5 ~~~~~~~~i~~~r~t~G~~g~~~~g~~~llLtt~GRkSG~~r~tPl~~~~~g~~~~~~~vvas~gG~~~~p~W~~Nl~A~ 84 (143)
T 3h96_A 5 PEDWNSQVIQEFRANGGRVGGNFEGAPMVLVHHVGRKTGKAAVTPMMYLPSDDDPGTIYVFASKAGAASNPAWYYNLTTA 84 (143)
T ss_dssp --CHHHHHHHHHHHTTSCCCGGGTTSCEEEEEEECTTTCCEEEEEEECEECSSCTTEEEEECCGGGCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCeecccccCCcEEEEEEcCCCCCCEEEEEEEEEEecCcCCcEEEEEcCCCCCCCChHHHhhhhC
Confidence 34565444444444332 23457899999984 699999998764322101366665 44 357789999999
Q ss_pred CcEEEEEEECCCceEEEEEEEEEEEcCCCCC
Q 028990 75 PFSEICWYFTESWDQFRINGRVDVIDGSNSD 105 (200)
Q Consensus 75 p~v~l~~~~~~~~~qiri~G~a~~~~~~~~~ 105 (200)
|.|.|..- . -++.++|.+++++|.+
T Consensus 85 p~v~v~~g----~--~~~~~~A~~~~~~Er~ 109 (143)
T 3h96_A 85 GTAQVEVG----T--ETYAVGVTEVTGEDRD 109 (143)
T ss_dssp SEEEEEET----T--EEEEEEEEEECHHHHH
T ss_pred CcEEEEEC----C--EEEEEEEEecCchHHH
Confidence 99998761 1 2577888888876543
No 47
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=93.56 E-value=0.11 Score=38.91 Aligned_cols=90 Identities=14% Similarity=0.094 Sum_probs=59.3
Q ss_pred hhHHHHHHHHHHhcCC-C----CCCCeEEEEeeCC-CCCceEEEEEEEEEeCCCCEEEEE-ecC----CCcchhhhhcCC
Q 028990 7 APWKQLLLQALESQSH-L----KHSIYFQLATVGT-NGRPSNRTVVFRGFQDNTDKIQIN-SDT----RSRKIEELKSCP 75 (200)
Q Consensus 7 ~~w~~~l~~~~~~~~~-~----~~~~~~~LATv~~-dG~P~~R~v~~r~~~~~~~~l~F~-Td~----~S~K~~~i~~np 75 (200)
..|..-.......+.+ . ....++.|.|++. .|.|+.-+|.+... + +.+++. +.. .+.=++||.+||
T Consensus 15 ~~~~~~~~~~~r~tgGr~g~~~~g~p~~lLtt~GRkSG~~r~tPl~~~~~-~--g~~~vVas~gG~~~~p~W~~Nl~A~p 91 (147)
T 3r5y_A 15 SEWIGNQVAQYEASDGAEAGEFDGRPLVILTTVGRKTGALRKTPVMRVEH-D--GRYAVVASQGGAPTHPAWYFNLVADP 91 (147)
T ss_dssp SHHHHHHHHHHHHHTTSSSCEETTEEEEEEEEECTTTCCEEEEEEECCEE-T--TEEEEECCGGGCSSCCHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcCCeecccccCccEEEEEEcCCCCCCEEEEEEEEEEE-C--CEEEEEEcCCCCCCCChHHHhhhhCC
Confidence 3565444444444332 2 2346789999984 69999999876433 3 366665 332 457799999999
Q ss_pred cEEEEEEECCCceEEEEEEEEEEEcCCCCC
Q 028990 76 FSEICWYFTESWDQFRINGRVDVIDGSNSD 105 (200)
Q Consensus 76 ~v~l~~~~~~~~~qiri~G~a~~~~~~~~~ 105 (200)
.|.|..- . -++.++|.+++++|.+
T Consensus 92 ~v~v~~g----~--~~~~~~Ar~~~~~Er~ 115 (147)
T 3r5y_A 92 RAQLRDK----D--AVLSVVARELAGPERA 115 (147)
T ss_dssp EEEEEET----T--EEEEEEEEECCHHHHH
T ss_pred cEEEEEC----C--EEEEEEEEECCchHHH
Confidence 9988751 1 2577889988876543
No 48
>3r5z_A Putative uncharacterized protein; split barrel-like fold, DUF385, deazaflavin-dependent reduct F420-dependent reductase, FDR; HET: F42; 1.50A {Nocardia farcinica}
Probab=93.05 E-value=0.18 Score=37.69 Aligned_cols=70 Identities=11% Similarity=0.035 Sum_probs=50.0
Q ss_pred CCeEEEEeeC-CCCCceEEEEEEEEEeCCCCEEEEEe-cC----CCcchhhhhcCCcEEEEEEECCCceEEEEEEEEEEE
Q 028990 26 SIYFQLATVG-TNGRPSNRTVVFRGFQDNTDKIQINS-DT----RSRKIEELKSCPFSEICWYFTESWDQFRINGRVDVI 99 (200)
Q Consensus 26 ~~~~~LATv~-~dG~P~~R~v~~r~~~~~~~~l~F~T-d~----~S~K~~~i~~np~v~l~~~~~~~~~qiri~G~a~~~ 99 (200)
..++.|.|++ ..|.|+.-++.+... ++ .+++.. .. .+.=++||.+||.|.|..- . -++.++|.++
T Consensus 37 ~p~~lLtt~GRkSG~~r~tPl~~~~~-~~--~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g----~--~~~~~~Ar~~ 107 (145)
T 3r5z_A 37 KPVVVLTTKGAKTGKLRKTPLMRVEH-NG--EYAVVASLGGAPKHPVWYHNIKAEPHVELRDG----T--EVGDYTAREV 107 (145)
T ss_dssp EEEEEEEEECTTTCCEEEEEEECEEE-TT--EEEEECCBTTBSSCCHHHHHHHHCCEEEEEET----T--EEEEEEEEEC
T ss_pred ceEEEEEEcCCCCCCEEEEEEEEEEE-CC--EEEEEEcCCCCCCCChHHHHhhhCCcEEEEEC----C--EEEEEEEEEC
Confidence 4678999998 469999999876433 33 666554 33 3456999999999998761 1 2567788888
Q ss_pred cCCCC
Q 028990 100 DGSNS 104 (200)
Q Consensus 100 ~~~~~ 104 (200)
+++|.
T Consensus 108 ~~~Er 112 (145)
T 3r5z_A 108 TGEEK 112 (145)
T ss_dssp CHHHH
T ss_pred CchHH
Confidence 87654
No 49
>2ptf_A Uncharacterized protein MTH_863; structural genomics, unknown function, PSI-2, protein struct initiative; HET: FMN; 2.35A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.4
Probab=82.54 E-value=2.9 Score=33.38 Aligned_cols=54 Identities=9% Similarity=-0.038 Sum_probs=42.4
Q ss_pred eEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEE
Q 028990 28 YFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYF 83 (200)
Q Consensus 28 ~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~ 83 (200)
-..++|.+++|.++.-|+.+...++ ..+.+.....|+-.+||++.+.+.+.+.+
T Consensus 37 e~vVtT~~~dG~~NlAP~s~~~~~~--~~~~i~i~~~k~T~~NI~~tgefVVNi~~ 90 (233)
T 2ptf_A 37 ETIVVTWDDSMVGNAAPIGVLCTGD--DTVTLYLYQGTRTVENVLNNGRFTVNVTL 90 (233)
T ss_dssp EEEEEEECTTCCEEEEEEEEEECSS--SEEEEEEETTCHHHHHHHHHSEEEEEECC
T ss_pred EEEEEEeCCCCCEeeccEEEEEcCC--CCEEEEEcCCChHHHHHHhCCEEEEEECC
Confidence 3578999999999999998853322 14566666788889999999999988865
No 50
>3b5m_A Uncharacterized protein; structural genomics, unknown function, flavoprotein, PSI-2, structure initiative; 1.21A {Rhodopirellula baltica}
Probab=79.97 E-value=2.8 Score=32.76 Aligned_cols=55 Identities=11% Similarity=-0.022 Sum_probs=43.1
Q ss_pred EEEEeeCCCCCceEEEEEEEEEe----CCCCEEEEEecCCCcchhhhhcCCcEEEEEEE
Q 028990 29 FQLATVGTNGRPSNRTVVFRGFQ----DNTDKIQINSDTRSRKIEELKSCPFSEICWYF 83 (200)
Q Consensus 29 ~~LATv~~dG~P~~R~v~~r~~~----~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~ 83 (200)
..++|.+++|.++..|+.+.... .....+.|..+..|.-..+|++++...+.+..
T Consensus 7 ~vVTT~~~~G~~N~AP~g~~~~~~~Svs~~P~v~v~i~~~s~T~~Ni~~~g~fvVNi~~ 65 (205)
T 3b5m_A 7 SLVTTLDEQGRINLAPLGPIVLPPQSPGGLPQFLLRPYEGSTTCDNLLASGNAVIHVID 65 (205)
T ss_dssp EEEEEECTTCCEEEEEECCEEECCSSTTCCCEEEECCCTTSHHHHHHHHHCEEEEEECC
T ss_pred EEEEEcCCCCCEeecceEEEEeccccccCCCcEEEEECCCCchHHHHHHCCEEEEEECC
Confidence 57899999999999998764321 22246767778889999999999999988764
No 51
>2iml_A Hypothetical protein; FMN binding, PSI-2, structural genomics, protein structure initiative; HET: FMN; 1.65A {Archaeoglobus fulgidus} SCOP: b.45.1.4
Probab=70.87 E-value=6.7 Score=30.43 Aligned_cols=55 Identities=9% Similarity=-0.125 Sum_probs=41.4
Q ss_pred CCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEe-cCCCcchhhhhcCCcEEEEEE
Q 028990 26 SIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINS-DTRSRKIEELKSCPFSEICWY 82 (200)
Q Consensus 26 ~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~T-d~~S~K~~~i~~np~v~l~~~ 82 (200)
.....++|.+++|.++.-|+.+....+. .+.+.. ...+.-.++|++.+.+.+.+-
T Consensus 14 i~ev~VtT~~~~G~~N~AP~s~~~~~~~--~~~v~~~~~~k~T~~NI~~~gefVvNi~ 69 (199)
T 2iml_A 14 INEIIAITENEDGSWNAAPIGIIVEDSS--SDTAKAKLYRNRTRANLERSGVLFANVT 69 (199)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEESCTT--SSEEEEECCSSHHHHHHHHHCEEEEEEC
T ss_pred eEEEEEEEcCCCCCEEeccEEEEEcCCC--CEEEEEcCCCChHHHHHHHCCEEEEEEC
Confidence 3567899999999999999987533221 244444 566888999999998888775
No 52
>1eje_A FMN-binding protein; structural genomics, PSI, protein struc initiative; HET: FMN; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.2
Probab=69.64 E-value=14 Score=28.01 Aligned_cols=59 Identities=10% Similarity=-0.006 Sum_probs=46.4
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++|.+++|.|+.-|+. +-.+..+...+.|.-+..|.-..+|+++....+.+....
T Consensus 28 ~V~vVTt~~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~T~~~i~~~~~F~Vnvl~~~ 87 (192)
T 1eje_A 28 PTVMVTTVDEEGNINAAPFSFTMPVSIDPPVVAFASAPDHHTARNIESTHEFVINITPAD 87 (192)
T ss_dssp ECEEEEEECTTCCEEEEEECSEEEEETTTTEEEEEECTTSHHHHHHHHHCEEEEEECBGG
T ss_pred ceEEEEEECCCCCeEEEEhhccchhcCCCCEEEEEECCchHHHHHHHHCCcEEEEeCCHH
Confidence 56788888888999998875 333444335788888999999999999999999887653
No 53
>3e4v_A NADH:FMN oxidoreductase like protein; YP_544701.1, structural genomics, joint center for structural genom JCSG; HET: MSE FMN; 1.40A {Methylobacillus flagellatus KT}
Probab=69.34 E-value=15 Score=27.83 Aligned_cols=59 Identities=14% Similarity=0.056 Sum_probs=44.8
Q ss_pred CeEEEEeeCCCCCceEEEEEE-EEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVVF-RGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~-r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++|.+.+|.|+.-|+.. -.+..+-..+.|.-+..|.-..+|+++....+.+....
T Consensus 19 pV~vVTt~~~~g~~n~~t~s~~~~vs~~PPlv~v~i~~~~~t~~~i~~~g~F~Vnvl~~~ 78 (186)
T 3e4v_A 19 PIVLVSTRGADGRANLMTMGFHMMMQHEPPLVGAIIGPWDYSHQALSETGECVLAVPTVD 78 (186)
T ss_dssp CCEEEEEECTTSCEEEEEECCEEEEETTTTEEEEECCTTSTHHHHHHHHCEEEEEECCGG
T ss_pred ceEEEEEeCCCCceEEEEhhhhhhhcCCCCEEEEEEcChhHHHHHHHHCCeEEEEeCCHH
Confidence 567888888899999888753 22333334677888888888999999999998886543
No 54
>2nr4_A Conserved hypothetical protein; structural genomics, unknown function, flavoprotein, PSI-2, protein structure initiative; HET: FMN; 1.85A {Methanosarcina mazei} SCOP: b.45.1.4
Probab=63.64 E-value=8.3 Score=30.16 Aligned_cols=51 Identities=10% Similarity=0.030 Sum_probs=42.4
Q ss_pred EEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEE
Q 028990 29 FQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYF 83 (200)
Q Consensus 29 ~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~ 83 (200)
..+.|.+.+ .+++-|+.+.. .+ +.+.+.....|.-+++|++++.+.+.+-+
T Consensus 32 ~vI~Tt~~~-~~N~APiG~~~-~~--~~v~i~~~~~s~T~eNI~~~~~fvvNv~~ 82 (213)
T 2nr4_A 32 EIIASTGFE-HPNAAPIGIVM-KG--ERPFVRLFKGSHTWENVLKEKCLASNVVY 82 (213)
T ss_dssp EEEEEECSS-SCEEEEEEEEE-SS--SSCEEEEETTSHHHHHHHHHCEEEEECCC
T ss_pred EEEEEecCC-CccccceEEEE-eC--CEEEEEECCCCchHHHHhhCCEEEEEeCC
Confidence 567777888 99999998753 23 37888899999999999999999988753
No 55
>3bpk_A Nitrilotriacetate monooxygenase component B; structural genomics, APC25244, PSI-2, protein structure initiative; 1.56A {Bacillus cereus atcc 14579}
Probab=62.27 E-value=18 Score=27.75 Aligned_cols=60 Identities=7% Similarity=-0.070 Sum_probs=44.1
Q ss_pred CeEEEEeeCCCCCceEEEEEE-EEEeCCCCEEEEEecCC----CcchhhhhcCCcEEEEEEECCC
Q 028990 27 IYFQLATVGTNGRPSNRTVVF-RGFQDNTDKIQINSDTR----SRKIEELKSCPFSEICWYFTES 86 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~-r~~~~~~~~l~F~Td~~----S~K~~~i~~np~v~l~~~~~~~ 86 (200)
.++.++|.+++|.|+.-|+.. -.+..+-..+.|.-+.. +.-..+|+++....+.+.....
T Consensus 29 pV~vVtt~~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~~~~~T~~~i~~~~~F~Vnil~~~~ 93 (206)
T 3bpk_A 29 PVAFVTSVTKEGVLNGAPYSYFNIVAANPPLISVSVQRKAGERKDTSRNAIEKGEFVVHISDESY 93 (206)
T ss_dssp ECEEEEEECTTCCEEEEEESSEEEEETTTTEEEEEEECBTTBCCHHHHHHHHHSEEEEEECBTTT
T ss_pred ccEEEEEeCCCCCEEEEEeeeeecccCCCCEEEEEEcCCCCChhHHHHHHHHCCeEEEEeCCHHH
Confidence 567889998899999998742 22333323667776766 7888999999999998876654
No 56
>3fge_A Putative flavin reductase with split barrel domai; YP_750721.1; 1.74A {Shewanella frigidimarina ncimb 400}
Probab=59.99 E-value=12 Score=28.85 Aligned_cols=60 Identities=10% Similarity=-0.012 Sum_probs=42.4
Q ss_pred CeEEEEeeCCCCCceEEEEEE-EEEeCCCCEEEEEecC---CCcchhhhhcCCcEEEEEEECCC
Q 028990 27 IYFQLATVGTNGRPSNRTVVF-RGFQDNTDKIQINSDT---RSRKIEELKSCPFSEICWYFTES 86 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~-r~~~~~~~~l~F~Td~---~S~K~~~i~~np~v~l~~~~~~~ 86 (200)
.+..++|.+++|.|+.-|+.. -.+..+...+.|..+. .+.-..+|+++....+.+.....
T Consensus 29 pV~vVtt~~~~G~~n~~t~s~~~~vs~~PPlv~v~i~~~~~~~~T~~~i~~~g~F~Vnvl~~~~ 92 (203)
T 3fge_A 29 SANLIGTQDRQGNTNLSIVSSVIHLGANPPLMGMIIRPHSVPRHTFENIMQTGLYTINHVNQSI 92 (203)
T ss_dssp ECEEEEEECTTCCEEEEEESCCEEEEETTEEEEEEECC---CHHHHHHHHHHCEEEEEECBTTT
T ss_pred ccEEEEEeCCCCceeEEEeeeeehhcCCCCEEEEEeCCCCCccHHHHHHHHCCcEEEEECCHHH
Confidence 567899999999999888742 1222222356666666 66778899999999998876543
No 57
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=58.85 E-value=34 Score=28.39 Aligned_cols=59 Identities=15% Similarity=0.082 Sum_probs=46.7
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.+..++|.+++|.|+.-|+. +-.+..+-..+.|.-+..+.-...|+++...++.+....
T Consensus 31 gV~vVTt~~~~G~~ngmt~ss~~svS~~PPlv~v~i~~~s~T~~~i~~sg~F~VnvL~~~ 90 (321)
T 3rh7_A 31 GVTVVTASDAAGKPIGFTANSFTSVSLDPPLLLVCLAKSSRNYESMTSAGRFAINVLSET 90 (321)
T ss_dssp ECEEEEEECTTCCEEEEEECCEEEEETTTTEEEEEEETTCSSHHHHHHCSEEEEEECBTT
T ss_pred CeEEEEEEcCCCCEEEEEecchhhhcCCCCEEEEEECCcchHHHHHHhCCeEEEEECCHH
Confidence 46788999889999988864 233443435788889999999999999999999997764
No 58
>2d5m_A Flavoredoxin; flavoprotein, FMN binding, electron transport; HET: FMN MES; 1.05A {Desulfovibrio vulgaris str}
Probab=57.54 E-value=15 Score=27.76 Aligned_cols=59 Identities=10% Similarity=0.055 Sum_probs=43.7
Q ss_pred CeEEEEeeCCCCCceEEEEEEE-EEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVVFR-GFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~r-~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.+..++|.+.+|.|+.-|+..- .+..+...+.|.-+..|.-..+|+++....+.+....
T Consensus 15 ~V~vVtt~~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~ 74 (190)
T 2d5m_A 15 PLFLVGTYDRDSRPNIMAAAWAGICCSQPPSIAVSLRKATYTYRSITERGAFTISIPSRA 74 (190)
T ss_dssp ECEEEEEECTTCCEEEEEECSEEEEEETTEEEEECCCTTSHHHHHHHHHSEEEEEECBGG
T ss_pred ceEEEEEecCCCceEEEEeeeeecccCCCCEEEEEEcCchhHHHHHHHCCeEEEEeCCHH
Confidence 4678888888899999887532 2222223567777888888999999999998887654
No 59
>1rz1_A Phenol 2-hydroxylase component B; flavin, NAD, oxidoreductase; HET: FAD NAD; 2.10A {Geobacillus thermoglucosidasius} SCOP: b.45.1.2 PDB: 1rz0_A*
Probab=56.96 E-value=24 Score=25.79 Aligned_cols=58 Identities=10% Similarity=0.041 Sum_probs=44.5
Q ss_pred CeEEEEeeCCCCCceEEEEEE-EEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVVF-RGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~-r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++|.+ +|.|+.-|+.. -.+..+...+.|.-+..|.-..+|+++....+.+....
T Consensus 16 ~V~vVTt~~-~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~s~T~~~i~~~~~F~Vnvl~~~ 74 (161)
T 1rz1_A 16 GVTVITTEL-NGAVHGMTANAFMSVSLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQD 74 (161)
T ss_dssp CCEEEEEEE-TTEEEEEEECCEEEEETTTTEEEEEEETTCHHHHHHHHHCEEEEEECBGG
T ss_pred ceEEEEEcc-CCEEEEEEEeEEEEeECCCCEEEEEeCCCCchHHHHhhCCcEEEEECCHH
Confidence 466788887 89999988753 23333335788888999999999999999999887653
No 60
>1usc_A Putative styrene monooxygenase small component; FMN-binding protein, structural genomics, riken structural genomics/proteomics initiative; HET: FMN; 1.24A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1usf_A*
Probab=48.69 E-value=30 Score=25.74 Aligned_cols=58 Identities=7% Similarity=-0.052 Sum_probs=43.6
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++| +.+|.|+.-|+. +-.+..+...+.|.-+..+.-...|+++....+.+....
T Consensus 20 ~V~vVtt-~~~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnil~~~ 78 (178)
T 1usc_A 20 VPAVVGV-RVEERVNFCPAVWNTGLSADPPLFGVSISPKRFTHGLLLKARRFSASFHPFG 78 (178)
T ss_dssp CCEEEEE-EETTEEEEEEESSEEEEETTTTEEEEEECTTSHHHHHHHHHCEEEEEECBGG
T ss_pred ceEEEEE-CCCCcceEEEEeeeceeeCCCCEEEEEECCCchHHHHHHHCCeEEEEeCCHH
Confidence 4667777 678989888864 223444435788888999999999999999988886553
No 61
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=48.45 E-value=53 Score=23.92 Aligned_cols=58 Identities=12% Similarity=-0.008 Sum_probs=44.7
Q ss_pred CeEEEEeeCCCCCceEEEEEE-EEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVVF-RGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~-r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.+..++|.+ +|.|+.-++.. -.+..+-..+.|.-+..+.-...|+++...++.+....
T Consensus 17 ~V~vVTt~~-~g~~~g~t~s~~~svs~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 75 (157)
T 3pft_A 17 GVIAIAAEV-DGTRVGLAASTFVPVSLEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGEA 75 (157)
T ss_dssp CCEEEEEEE-TTEEEEEEESCCEEEETTTTEEEEEEETTCSSHHHHTTSSCEEEEECBTT
T ss_pred ceEEEEEee-CCEEEEEEeeeEeEEECCCcEEEEEECCCCchHHHHHhCCEEEEEECCHH
Confidence 456788887 88898888742 33433335788889999999999999999999987664
No 62
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=47.96 E-value=44 Score=24.07 Aligned_cols=58 Identities=9% Similarity=0.009 Sum_probs=44.0
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++|.+ +|.|+.-|+. +-.+..+...+.|.-+..+.-...|+++....+.+...+
T Consensus 15 ~V~vVtt~~-~g~~ng~t~s~~~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 15 GVTVVAARL-GEEERGMTATAFMSLSLEPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp ECEEEEEEE-TTEEEEEEESCEEEEETTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred eeEEEEEcc-CCeeEEEEEEeeecccCCCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 456788877 7888888874 333444335788888999999999999999999887654
No 63
>1yoa_A Putative flavoprotein; HB8, FAD, structural genomics, riken structura genomics/proteomics initiative, RSGI, unknown function; HET: FAD FMN; 1.90A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1wgb_A*
Probab=47.52 E-value=39 Score=24.48 Aligned_cols=58 Identities=7% Similarity=-0.038 Sum_probs=44.1
Q ss_pred CeEEEEeeCCCCCceEEEEEE-EEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVVF-RGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~-r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++|.+ +|.|+.-|+.. -.+..+...+.|.-+..|.-..+|+++....+.+....
T Consensus 16 ~V~vVtt~~-~g~~n~~t~s~~~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~ 74 (159)
T 1yoa_A 16 GLYVLTAKD-GDEVAAGTVNWVTQASFQPPLVAVGLKRDSHLHALVERTGKLALMTLAHD 74 (159)
T ss_dssp BCEEEEEEE-TTEEEEEEECCEEEEETTTTEEEEEEESSSHHHHHHHHHCEEEEEECBTT
T ss_pred ccEEEEEcc-CCEEEEEEEeeeeeeEcCCCEEEEEECCCCchHHHHHhCCeEEEEECchh
Confidence 467777865 78899888753 23343335788888999999999999999999987664
No 64
>2r6v_A Uncharacterized protein PH0856; FMN-binding protein, flavin reductase like DOMA structural genomics, joint center for structural genomics; HET: FMN; 1.25A {Pyrococcus horikoshii}
Probab=46.32 E-value=40 Score=25.49 Aligned_cols=56 Identities=4% Similarity=-0.111 Sum_probs=42.4
Q ss_pred eEEEEeeCCCCCceEEEEEE-EEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEEC
Q 028990 28 YFQLATVGTNGRPSNRTVVF-RGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFT 84 (200)
Q Consensus 28 ~~~LATv~~dG~P~~R~v~~-r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~ 84 (200)
++.++|. .+|.|+.-|+.. -.+..+...+.|.-+..|.-..+|+++...++.+...
T Consensus 31 V~vVTt~-~~g~~ng~t~s~~~~vs~~Pp~v~v~i~~~s~T~~~i~~~g~F~Vnvl~~ 87 (191)
T 2r6v_A 31 TYLIVSG-HGEETNVMAADWVTVVSFDPFIVGVAVAPKRTTHKLIKKYGEFVISVPSL 87 (191)
T ss_dssp CEEEEEC-CGGGCEEEEECCEEEEETTTTEEEEEECTTSHHHHHHHHHSEEEEEECBG
T ss_pred EEEEEEe-cCCeeEEEEeeeeeeeeCCCCEEEEEECCCchHHHHHHHCCEEEEEeCCH
Confidence 4566676 689999988753 2334333578888899999999999999988888654
No 65
>3bnk_A Flavoredoxin; protein-FMN complex, electron transport; HET: FMN; 2.05A {Methanosarcina acetivorans}
Probab=45.53 E-value=45 Score=25.20 Aligned_cols=58 Identities=7% Similarity=0.060 Sum_probs=43.6
Q ss_pred CeEEEEeeCCCCCceEEEEEEE-EEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVVFR-GFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~r-~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.+..++|. .+|.|+.-|+..- .+..+...+.|.-+..|.-..+|+++...++.+....
T Consensus 17 pV~vVTt~-~~g~~n~~t~s~~~~vs~~PP~v~v~i~~~s~T~~~i~~~~~F~Vnil~~~ 75 (196)
T 3bnk_A 17 PVTLLGAN-VKGKANLMALGWVSRVNANPPMLGVGVNKSHYTPEGIAENGSFSVNFPYSG 75 (196)
T ss_dssp ECEEEEEE-ETTEEEEEEECCEEEEETTTTEEEEEEETTSSHHHHHHHHTEEEEEECBGG
T ss_pred CEEEEEEe-cCCcceEEEeeeeeeeeCCCCEEEEEECCcchHHHHHHHCCeEEEEECCHH
Confidence 45677777 6899998887532 2333334788888999999999999999999887653
No 66
>3cb0_A 4-hydroxyphenylacetate 3-monooxygenase; corrin reductase, COBR, six-stranded anti-parallel beta- barrel, oxidoreductase; HET: FMN; 1.60A {Brucella melitensis}
Probab=39.11 E-value=59 Score=23.95 Aligned_cols=57 Identities=16% Similarity=0.028 Sum_probs=39.3
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEEC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFT 84 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~ 84 (200)
.++.++|.+++| +..-++. +-.+..+-..+.|.-+..|.-..+|+++....+.+...
T Consensus 29 ~V~vVTt~~~~~-~~g~t~ss~~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 86 (173)
T 3cb0_A 29 AVQIVTTAGAAG-RRGLTLTAACSVSDNPPTILICLQKIHEENRIFIENGVFAINTLAG 86 (173)
T ss_dssp ECEEEEECSTTC-CEEEEECCEEEEEETTEEEEEEEESSSGGGHHHHHHTEEEEEECBG
T ss_pred ceEEEEEccCCC-ceeEEEEEEeeeECCCCEEEEEeCCCchHHHHHhhCCEEEEEeCCH
Confidence 567888888666 4554441 22333222367777888899999999999998888654
No 67
>1i0r_A Conserved hypothetical protein; six stranded antiparallel beta-barrel, FMN and NADP+ binding domain, oxidoreductase; HET: FMN; 1.50A {Archaeoglobus fulgidus} SCOP: b.45.1.2 PDB: 1i0s_A*
Probab=38.57 E-value=80 Score=23.14 Aligned_cols=59 Identities=10% Similarity=0.094 Sum_probs=43.8
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES 86 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~ 86 (200)
.++.++|.+ +|.|+.-++. +-.+..+-..+.|.-+..+.-...|+++....+.+.....
T Consensus 12 gV~vVTt~~-~g~~ng~t~s~~~~vs~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~~ 71 (169)
T 1i0r_A 12 GLYIVTSES-NGRKCGQIANTVFQLTSKPVQIAVCLNKENDTHNAVKESGAFGVSVLELET 71 (169)
T ss_dssp BCEEEEEEE-TTEEEEEEESCEEEEETTTTEEEEEEETTSHHHHHHHHHSEEEEEEEBTTC
T ss_pred ceEEEEEcc-CCeEEEEEEEEEEEeECCCCEEEEEECCCchhHHHHHhCCEEEEEeCChhH
Confidence 456788876 6888888864 2233333347888889999999999999999998876643
No 68
>2r0x_A Possible flavin reductase; split barrel-like, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE SO4; 1.06A {Haemophilus somnus 129PT}
Probab=36.73 E-value=79 Score=22.83 Aligned_cols=58 Identities=12% Similarity=0.084 Sum_probs=41.9
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++|.+ +|.|+.-++. +-.+..+-..+.|.-+..+.-...|+++...++.+...+
T Consensus 18 ~V~vVtt~~-~g~~ng~t~s~~~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 76 (158)
T 2r0x_A 18 AVHIVTTSG-ETGQHGFTASAVCSVTDSPPTLLVCINSNARAYEHFVKNRVLMVNTLTAE 76 (158)
T ss_dssp ECEEEEEEC-SSCEEEEEESCEEEEEETTEEEEEEEETTSTTHHHHHHHCEEEEEECBTT
T ss_pred ceEEEEEcc-CCeEEEEEEeeEeEeECCCCEEEEEeCCCChHHHHHHhCCEEEEEeCCHH
Confidence 456778876 6788888764 223332224677888999999999999999988887654
No 69
>2d37_A Hypothetical NADH-dependent FMN oxidoreductase; flavin reductase; HET: FMN NAD; 1.70A {Sulfolobus tokodaii} PDB: 2d36_A* 2d38_A*
Probab=34.87 E-value=81 Score=23.44 Aligned_cols=56 Identities=14% Similarity=0.018 Sum_probs=42.1
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEE
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYF 83 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~ 83 (200)
.+++++|.+ +|.|+.-|+. +-.+..+-..+.|.-+..+.-...|+++...++.+..
T Consensus 35 ~V~vVTt~~-~g~~ng~t~ss~~svS~~PPlv~v~i~~~~~T~~~i~~sg~F~Vnvl~ 91 (176)
T 2d37_A 35 GVAIVTTNW-KGELVGMTVNTFNSLSLNPPLVSFFADRMKGNDIPYKESKYFVVNFTD 91 (176)
T ss_dssp ECEEEEEEE-TTEEEEEEESCCEEEETTTTEEEEEEEGGGTTTHHHHTCSEEEEEEEC
T ss_pred ceEEEEEcc-CCeEEEEEEeccccccCCCCEEEEEECCCchHHHHHHhCCeEEEEchh
Confidence 456777776 7888888874 2234333357888888888999999999999888865
No 70
>3adj_A F21M12.9 protein; HYL1, miRNA processing, RNA binding protein, gene regulation; 3.00A {Arabidopsis thaliana} PDB: 2l2m_A
Probab=33.66 E-value=86 Score=19.77 Aligned_cols=58 Identities=14% Similarity=-0.003 Sum_probs=34.2
Q ss_pred hhHHHHHHHHHHhcCCCCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhh
Q 028990 7 APWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEE 70 (200)
Q Consensus 7 ~~w~~~l~~~~~~~~~~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~ 70 (200)
-.|+..|++....+. ...|.|-.+... |.+|.+...+....++ .++..-...|.|..+
T Consensus 4 ~n~Kt~LqE~~q~~~-~~~p~Y~~~~~~---Gp~h~~~F~~~v~v~g--~~~~~G~G~sKK~Ae 61 (76)
T 3adj_A 4 GLCKNLLQEYAQKMN-YAIPLYQCQKVE---TLGRVTQFTCTVEIGG--IKYTGAATRTKKDAE 61 (76)
T ss_dssp HHHHHHHHHHHHTTT-CCCCEEEEEEEE---CSSSCEEEEEEEEETT--EEEECCCBSSHHHHH
T ss_pred CCHHHHHHHHHHHhC-CCCCeEEEeecc---CCCCCCcEEEEEEECC--EEEEEeccCCHHHHH
Confidence 468999998777643 334556555544 4456666655544453 454444456777655
No 71
>3hmz_A Flavin reductase domain protein, FMN-binding; FMN-binding domain of flavin reductases-like enzyme, structu genomics; HET: MSE FMN; 1.50A {Shewanella baltica}
Probab=30.91 E-value=55 Score=24.86 Aligned_cols=57 Identities=9% Similarity=-0.010 Sum_probs=40.5
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEEC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFT 84 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~ 84 (200)
.+..++| +.+|.|+.-|+. +-.+..+-..+.|.-+..+.-...|+++...++.+...
T Consensus 30 pV~vVTt-~~~g~~ng~t~s~~~~vs~~PP~v~v~i~~~~~t~~~i~~~g~F~Vnvl~~ 87 (199)
T 3hmz_A 30 PTVLVSA-RSQGIDNVMAAAWCCALDFAPPKLTVVLDKMTKTREFIEQSGMFVIQVPTV 87 (199)
T ss_dssp CCEEEEE-EETTEEEEEEESCEEEEEETTEEEEEECCTTCHHHHHHHHHSEEEEEECBG
T ss_pred CEEEEEe-CCCCcceEEEeeeeceecCCCCEEEEEECCcchHHHHHHHCCEEEEEECCH
Confidence 4566777 568889888864 22222222367787888888899999999998888654
No 72
>3k86_A Chlorophenol-4-monooxygenase component 1; NADH:FAD oxidoreductase, oxidoreductase; 2.00A {Burkholderia cepacia} PDB: 3k87_A* 3k88_A*
Probab=29.35 E-value=1e+02 Score=23.07 Aligned_cols=58 Identities=17% Similarity=0.137 Sum_probs=41.1
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++|.+++| |+.-++. +-.+..+-..+.|.-+..+.-...|+++...++.+...+
T Consensus 32 gV~vVTt~~~~g-~~gmt~ss~~svS~~PPlv~v~i~~~~~T~~~i~~sg~F~Vnvl~~~ 90 (185)
T 3k86_A 32 PVTVVATNGPFG-LAGLTCSAVCSVCDRPPTVLLCINRKSYAAGIIKSNGVLSVNWLAAG 90 (185)
T ss_dssp ECEEEEECSTTC-CEEEEECCEEEEEETTEEEEEEEETTSHHHHHHHHHCEEEEEECBGG
T ss_pred CcEEEEEecCCC-ceEEEeeeEeeEECCCCEEEEEECCCchHHHHHHHCCeEEEEECcHH
Confidence 456788888776 6665653 222332224678888999999999999999998886543
No 73
>1ekz_A DSRBDIII, maternal effect protein (staufen); structure, protein/RNA, protein DSRBD, RNA hairpin; NMR {Drosophila melanogaster} SCOP: d.50.1.1 PDB: 1stu_A
Probab=29.35 E-value=1.1e+02 Score=19.26 Aligned_cols=62 Identities=6% Similarity=0.082 Sum_probs=35.9
Q ss_pred CCCCCChhHHHHHHHHHHhcCCCCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecCCCcchhh
Q 028990 1 MGTPVTAPWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDTRSRKIEE 70 (200)
Q Consensus 1 ~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~~S~K~~~ 70 (200)
|.......++..|++....+. .. +.| -++...|.+|.+...+....+ + ++..-...|.|..+
T Consensus 1 m~~~~~~d~ks~LqE~~q~~~-~~-p~Y---~~~~~~Gp~h~~~F~~~v~i~--~-~~~~G~G~sKK~Ae 62 (76)
T 1ekz_A 1 MDEGDKKSPISQVHEIGIKRN-MT-VHF---KVLREEGPAHMKNFITACIVG--S-IVTEGEGNGKKVSK 62 (76)
T ss_dssp CCCCCCSCHHHHHHHHHHHTT-CC-CEE---EESSSCCSSSCSCSSEEEEET--T-EEEEECCCSTTSSS
T ss_pred CCCCCCCCHHHHHHHHHHHcC-CC-CEE---EEEEeECCCCCCcEEEEEEEC--C-EEEEEeeCCHHHHH
Confidence 555556689999998777643 33 444 334445656666544433334 2 55555566666554
No 74
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=29.21 E-value=1.4e+02 Score=22.25 Aligned_cols=58 Identities=16% Similarity=0.125 Sum_probs=43.8
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECCC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTES 86 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~~ 86 (200)
.+ .++|.+ +|.|+.-++. +-.+..+-..+.|.-+..+.-...|+++....+.+.....
T Consensus 33 gV-vVTt~~-~g~~~g~t~ss~~svS~~PPlv~v~i~~~~~T~~~i~~~g~F~Vnvl~~~~ 91 (185)
T 4hx6_A 33 GV-TVVTVG-GSEPRGMTANSFTSVSLSPPLVLICVGKDAVMHQRLTALPTFAVSVLEAGQ 91 (185)
T ss_dssp CC-EEEEEC-SSSCEEEEESCCEEEETTTTEEEEEEETTSHHHHHHHHSCEEEEEECBTTC
T ss_pred cE-EEEEcC-CCEEEEEEEeeEeeeECCCCEEEEEECCCcHHHHHHHHCCeEEEEECCHHH
Confidence 45 788877 7888888764 2334444357888889999999999999999999876643
No 75
>3nfw_A Flavin reductase-like, FMN-binding protein; seattle structural genomics center for infectious disease, S mycobacterium; 1.60A {Mycobacterium thermoresistibile}
Probab=27.60 E-value=95 Score=23.97 Aligned_cols=58 Identities=12% Similarity=0.084 Sum_probs=43.8
Q ss_pred CeEEEEeeCCCCCceEEEEE-EEEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVV-FRGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~-~r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++|.+ +|.|+.-++. +-.+..+-..+.|.-+..+.-...|+++....+.+....
T Consensus 43 gV~vVTt~~-~g~~ngmt~Ssf~svS~dPPlv~v~v~~~s~T~~~I~~sg~F~VniL~~~ 101 (210)
T 3nfw_A 43 GVTIITTVH-EGNPVGFACQSFAALSLDPPLVLFCPTKVSRSWKAIEASGRFCVNILHEK 101 (210)
T ss_dssp CCEEEEEEE-TTEEEEEEECCEEEEETTTTEEEECCBTTCHHHHHHHHHCEEEEEECBGG
T ss_pred CcEEEEEec-CCeEEEEEeccchhhcCCCCEEEEEECCCchHHHHHHHCCeEEEEECCHH
Confidence 467788887 7888887764 333443335788888889999999999999999997654
No 76
>2qck_A Flavin reductase domain protein; YP_831077.1, flavin reducta domain, structural genomics, joint center for structural GE JCSG; 1.90A {Arthrobacter SP}
Probab=25.98 E-value=1.2e+02 Score=22.17 Aligned_cols=58 Identities=7% Similarity=-0.020 Sum_probs=41.5
Q ss_pred CeEEEEeeCCCCCceEEEEEE-EEEeCCCCEEEEEecCCCcchhhhhcCCcEEEEEEECC
Q 028990 27 IYFQLATVGTNGRPSNRTVVF-RGFQDNTDKIQINSDTRSRKIEELKSCPFSEICWYFTE 85 (200)
Q Consensus 27 ~~~~LATv~~dG~P~~R~v~~-r~~~~~~~~l~F~Td~~S~K~~~i~~np~v~l~~~~~~ 85 (200)
.++.++|.+++ .|+.-++.. -.+.-+-..+.|.-+..+.-...|+++...++.+...+
T Consensus 23 ~V~vVTt~~~~-~~~g~t~s~~~svS~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 81 (167)
T 2qck_A 23 GVAIITVNYNG-TPYGFTATSVASLSAQPPRFTFNMARSSSSWPAIANTTHIGVHMLGLD 81 (167)
T ss_dssp ECEEEEEEETT-EEEEEEESCCEEEEETTEEEEEEEETTSTTHHHHHHCCEEEEEECBGG
T ss_pred ceEEEEEecCC-ceEEEEEeeeeeEEcCCCEEEEEECCCCchHHHHHhCCeEEEEECcHH
Confidence 46678888755 488777642 22332324677888989999999999999999987654
No 77
>1t4o_A Ribonuclease III; RNT1P, DSRBD, RNA-binding, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: d.50.1.1 PDB: 1t4l_B 2lbs_B
Probab=25.06 E-value=1e+02 Score=21.72 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=38.5
Q ss_pred CCCCCC-hhHHHHHHHHHHhcCCCCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCE-EEEEecCCCcchhhhh
Q 028990 1 MGTPVT-APWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDK-IQINSDTRSRKIEELK 72 (200)
Q Consensus 1 ~~~~~~-~~w~~~l~~~~~~~~~~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~-l~F~Td~~S~K~~~i~ 72 (200)
|.+... -.|++.|++.+... . ..|.|-.+.+ |..|.+........++ . ++..-..+|.|-+|-.
T Consensus 1 ~~~~~~~~D~KT~LQE~~Q~~-~-~~P~Y~vv~~----GPdH~k~F~v~V~i~g--~~~~g~G~G~SKK~AEQ~ 66 (117)
T 1t4o_A 1 MKTDKLDMNAKRQLYSLIGYA-S-LRLHYVTVKK----PTAVDPNSIVECRVGD--GTVLGTGVGRNIKIAGIR 66 (117)
T ss_dssp --CCCCCTTHHHHHHHHHCCG-G-GCCEEEEEEC----CCSSCCCEEEEEECTT--CCEEEEEEESSHHHHHHH
T ss_pred CCCCcCCCCchHHHHHHHcCC-C-CCCEEEEeee----CCCCCCeEEEEEEECC--EEEEEEEEeCCHHHHHHH
Confidence 555433 69999999988662 2 3467766664 4345555555444454 5 6666666788866643
No 78
>3adg_A F21M12.9 protein; HYL1, miRNA processing mechanism, RNA binding protein, gene regulation; 1.70A {Arabidopsis thaliana} PDB: 3adi_A
Probab=23.96 E-value=1.4e+02 Score=18.55 Aligned_cols=56 Identities=16% Similarity=0.077 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHhcCCCCCCCeEEEEeeCCCCCceEEEEEEEEEeCCCCEEEEEecC-CCcchhh
Q 028990 8 PWKQLLLQALESQSHLKHSIYFQLATVGTNGRPSNRTVVFRGFQDNTDKIQINSDT-RSRKIEE 70 (200)
Q Consensus 8 ~w~~~l~~~~~~~~~~~~~~~~~LATv~~dG~P~~R~v~~r~~~~~~~~l~F~Td~-~S~K~~~ 70 (200)
.|+..|++....+. ...|.|-++.+ |.+|.+...+....++ ..+..-.. .|.|..+
T Consensus 4 d~Kt~LqE~~q~~~-~~~p~Y~~~~~----Gp~h~~~F~~~v~v~g--~~~~~G~G~~sKK~Ae 60 (73)
T 3adg_A 4 VFKSRLQEYAQKYK-LPTPVYEIVKE----GPSHKSLFQSTVILDG--VRYNSLPGFFNRKAAE 60 (73)
T ss_dssp SHHHHHHHHHHHTT-CCCCEEEEEEE----SSTTSCEEEEEEEETT--EEEECCSCBSSHHHHH
T ss_pred CHHHHHHHHHHHcC-CCCCEEEEEeE----CCCCCCeEEEEEEECC--EEEEeeeccCCHHHHH
Confidence 57888888776643 33456655553 5456666555444443 33333334 5676554
Done!