BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>028993
MPDREKWGNPASFPSTVNLLQKAEEMAEGDEDLPRDAKIVKSLLKSMGVEDYEPRVIHQF
LELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNR
NKIPLPKSIAGRGIPLPPEQDTLISPNYQLSIEKKESAQAAEEMEEDEQSTEPNASEEQR
TDMLQQTPQKVSFPLARRTK

High Scoring Gene Products

Symbol, full name Information P value
TAFII21
TATA binding protein associated factor 21kDa subunit
protein from Arabidopsis thaliana 5.5e-61
taf9
TFIID subunit
gene from Dictyostelium discoideum 4.2e-30
Taf9b
TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
gene from Rattus norvegicus 1.2e-28
TAF9
Transcription initiation factor TFIID subunit 9
protein from Bos taurus 1.5e-28
TAF9
Uncharacterized protein
protein from Canis lupus familiaris 1.5e-28
TAF9
Transcription initiation factor TFIID subunit 9
protein from Homo sapiens 1.5e-28
TAF9
Transcription initiation factor TFIID subunit 9
protein from Homo sapiens 1.5e-28
TAF9
Transcription initiation factor TFIID subunit 9
protein from Homo sapiens 1.5e-28
TAF9
Transcription initiation factor TFIID subunit 9
protein from Homo sapiens 1.5e-28
Taf9
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
protein from Mus musculus 1.5e-28
Taf9
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
gene from Rattus norvegicus 1.5e-28
taf9
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor
gene_product from Danio rerio 1.5e-28
TAF9
Uncharacterized protein
protein from Gallus gallus 1.9e-28
Taf9b
TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor
protein from Mus musculus 3.1e-28
TAF9
Transcription initiation factor TFIID subunit 9
protein from Homo sapiens 5.0e-28
TAF9B
Uncharacterized protein
protein from Canis lupus familiaris 6.4e-28
TAF9B
Uncharacterized protein
protein from Bos taurus 8.2e-28
TAF9B
Uncharacterized protein
protein from Bos taurus 8.2e-28
LOC100516658
Uncharacterized protein
protein from Sus scrofa 8.2e-28
LOC100516658
Uncharacterized protein
protein from Sus scrofa 8.2e-28
TAF9B
Transcription initiation factor TFIID subunit 9B
protein from Homo sapiens 1.0e-27
TAF9B
Uncharacterized protein
protein from Canis lupus familiaris 2.8e-27
e(y)1
enhancer of yellow 1
protein from Drosophila melanogaster 9.7e-25
TAF9
Transcription initiation factor TFIID subunit 9
protein from Homo sapiens 4.8e-23
orf19.1111 gene_product from Candida albicans 2.9e-16
TAF9
Subunit (17 kDa) of TFIID and SAGA complexes
gene from Saccharomyces cerevisiae 2.0e-15
LOC100516658
Uncharacterized protein
protein from Sus scrofa 4.9e-14
taf-9 gene from Caenorhabditis elegans 2.2e-11

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  028993
        (200 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2014350 - symbol:TAFII21 "TATA binding protein...   624  5.5e-61   1
DICTYBASE|DDB_G0272360 - symbol:taf9 "TFIID subunit" spec...   339  4.2e-30   1
RGD|621116 - symbol:Taf9b "TAF9B RNA polymerase II, TATA ...   319  1.2e-28   1
UNIPROTKB|Q17QQ4 - symbol:TAF9 "Transcription initiation ...   318  1.5e-28   1
UNIPROTKB|E2R911 - symbol:TAF9 "Uncharacterized protein" ...   318  1.5e-28   1
UNIPROTKB|D6RGK3 - symbol:TAF9 "Transcription initiation ...   318  1.5e-28   1
UNIPROTKB|D6RIE8 - symbol:TAF9 "Transcription initiation ...   318  1.5e-28   1
UNIPROTKB|D6RIV9 - symbol:TAF9 "Transcription initiation ...   318  1.5e-28   1
UNIPROTKB|Q16594 - symbol:TAF9 "Transcription initiation ...   318  1.5e-28   1
MGI|MGI:1888697 - symbol:Taf9 "TAF9 RNA polymerase II, TA...   318  1.5e-28   1
RGD|727861 - symbol:Taf9 "TAF9 RNA polymerase II, TATA bo...   318  1.5e-28   1
ZFIN|ZDB-GENE-030131-204 - symbol:taf9 "TAF9 RNA polymera...   318  1.5e-28   1
UNIPROTKB|E1BU14 - symbol:TAF9 "Uncharacterized protein" ...   317  1.9e-28   1
MGI|MGI:3039562 - symbol:Taf9b "TAF9B RNA polymerase II, ...   315  3.1e-28   1
UNIPROTKB|D6RIY1 - symbol:TAF9 "Transcription initiation ...   313  5.0e-28   1
UNIPROTKB|J9P1X2 - symbol:TAF9B "Uncharacterized protein"...   312  6.4e-28   1
UNIPROTKB|G3MWV4 - symbol:TAF9B "Uncharacterized protein"...   311  8.2e-28   1
UNIPROTKB|G5E509 - symbol:TAF9B "Uncharacterized protein"...   311  8.2e-28   1
UNIPROTKB|F1RPF8 - symbol:LOC100516658 "Uncharacterized p...   311  8.2e-28   1
UNIPROTKB|I3LFP6 - symbol:LOC100516658 "Uncharacterized p...   311  8.2e-28   1
UNIPROTKB|Q9HBM6 - symbol:TAF9B "Transcription initiation...   310  1.0e-27   1
UNIPROTKB|E2RRB3 - symbol:TAF9B "Uncharacterized protein"...   306  2.8e-27   1
FB|FBgn0000617 - symbol:e(y)1 "enhancer of yellow 1" spec...   282  9.7e-25   1
UNIPROTKB|D6RHW1 - symbol:TAF9 "Transcription initiation ...   266  4.8e-23   1
POMBASE|SPAC12G12.05c - symbol:taf9 "SAGA complex/ transc...   251  1.9e-21   1
CGD|CAL0001873 - symbol:orf19.1111 species:5476 "Candida ...   202  2.9e-16   1
SGD|S000004849 - symbol:TAF9 "Subunit (17 kDa) of TFIID a...   194  2.0e-15   1
UNIPROTKB|K7GKR1 - symbol:LOC100516658 "Uncharacterized p...   181  4.9e-14   1
WB|WBGene00006391 - symbol:taf-9 species:6239 "Caenorhabd...   156  2.2e-11   1
ASPGD|ASPL0000059806 - symbol:AN0794 species:162425 "Emer...    94  4.5e-06   2


>TAIR|locus:2014350 [details] [associations]
            symbol:TAFII21 "TATA binding protein associated factor
            21kDa subunit" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0005669 "transcription factor TFIID complex" evidence=ISS]
            [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA;ISS] [GO:0000394 "RNA splicing, via endonucleolytic
            cleavage and ligation" evidence=RCA] [GO:0006366 "transcription
            from RNA polymerase II promoter" evidence=RCA] [GO:0009560 "embryo
            sac egg cell differentiation" evidence=RCA] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0006352 Gene3D:1.10.20.10
            SUPFAM:SSF47113 GO:GO:0003743 EMBL:AC006577 eggNOG:COG5094
            KO:K03133 PANTHER:PTHR12075 EMBL:AF238327 EMBL:AY087886
            EMBL:AY463624 EMBL:BT025537 IPI:IPI00519608 PIR:E96582
            RefSeq:NP_175816.1 UniGene:At.65937 HSSP:Q27272
            ProteinModelPortal:Q9SYH2 SMR:Q9SYH2 IntAct:Q9SYH2 STRING:Q9SYH2
            PaxDb:Q9SYH2 PRIDE:Q9SYH2 EnsemblPlants:AT1G54140.1 GeneID:841854
            KEGG:ath:AT1G54140 TAIR:At1g54140 HOGENOM:HOG000005834
            InParanoid:Q9SYH2 OMA:TLISPNY PhylomeDB:Q9SYH2
            ProtClustDB:CLSN2682169 ArrayExpress:Q9SYH2 Genevestigator:Q9SYH2
            Uniprot:Q9SYH2
        Length = 183

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 126/180 (70%), Positives = 139/180 (77%)

Query:    28 EGDEDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTI 87
             EG+ED+PRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVV+VLTDAQVYSEHA K  I
Sbjct:     4 EGEEDVPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASKPNI 63

Query:    88 DCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPN 147
             DCDDVKLA+QSKVN SFSQPP REVLLELA +RNKIPLPKSIAG G+PLPPEQDTL+SPN
Sbjct:    64 DCDDVKLAIQSKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLLSPN 123

Query:   148 YQLSIXXXXXXXXXXXXXXXXXXXXPNAS-------EEQRTDMLQQTPQKVSFPLARRTK 200
             YQL I                    P  S       ++Q +D+  QTPQ+VSFPL+RR K
Sbjct:   124 YQLVIPKKSVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLPSQTPQRVSFPLSRRPK 183


>DICTYBASE|DDB_G0272360 [details] [associations]
            symbol:taf9 "TFIID subunit" species:44689
            "Dictyostelium discoideum" [GO:0046982 "protein heterodimerization
            activity" evidence=IEA] [GO:0006352 "DNA-dependent transcription,
            initiation" evidence=IEA] [GO:0005669 "transcription factor TFIID
            complex" evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS]
            [GO:0016573 "histone acetylation" evidence=ISS] [GO:0016568
            "chromatin modification" evidence=ISS] [GO:0006367 "transcription
            initiation from RNA polymerase II promoter" evidence=ISS]
            [GO:0003743 "translation initiation factor activity" evidence=IEA]
            [GO:0006413 "translational initiation" evidence=IEA]
            InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            dictyBase:DDB_G0272360 GenomeReviews:CM000151_GR GO:GO:0016573
            Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AAFI02000008 GO:GO:0000124
            GO:GO:0003743 GO:GO:0006367 GO:GO:0005669 eggNOG:COG5094
            PANTHER:PTHR12075 RefSeq:XP_645145.1 ProteinModelPortal:Q55A39
            SMR:Q55A39 EnsemblProtists:DDB0230997 GeneID:8618315
            KEGG:ddi:DDB_G0272360 InParanoid:Q55A39 OMA:NSETEID Uniprot:Q55A39
        Length = 619

 Score = 339 (124.4 bits), Expect = 4.2e-30, P = 4.2e-30
 Identities = 62/126 (49%), Positives = 93/126 (73%)

Query:    25 EMAEGDEDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGK 84
             ++ + + D PRD++++KS+LK+MG++ +EPRV++Q LE  Y+YV +VL DA +Y EH+GK
Sbjct:   204 DITQTNLDEPRDSRVIKSILKTMGIQAHEPRVVNQLLEFMYKYVFEVLQDAMIYGEHSGK 263

Query:    85 NTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGR-GIPLPPEQDTL 143
               ID  DV+L++QS+VN   S PP RE+LL +A+ +NK PLP  I  R G+ LPP++  L
Sbjct:   264 TDIDVSDVRLSIQSRVNYQISTPPPRELLLSIAEEKNKTPLPP-IPNRYGVFLPPDEYCL 322

Query:   144 ISPNYQ 149
              +PNYQ
Sbjct:   323 TNPNYQ 328


>RGD|621116 [details] [associations]
            symbol:Taf9b "TAF9B RNA polymerase II, TATA box binding protein
            (TBP)-associated factor" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA;ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005669 "transcription factor TFIID complex"
            evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
            initiation" evidence=IEA] [GO:0012501 "programmed cell death"
            evidence=IEP] [GO:0014070 "response to organic cyclic compound"
            evidence=IEP] [GO:0030307 "positive regulation of cell growth"
            evidence=IEA;ISO] [GO:0033276 "transcription factor TFTC complex"
            evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
            activity" evidence=IEA] InterPro:IPR003162 InterPro:IPR009072
            Pfam:PF02291 RGD:621116 GO:GO:0043066 GO:GO:0030307 GO:GO:0006352
            GO:GO:0000122 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0014070
            GO:GO:0012501 GO:GO:0005669 eggNOG:COG5094 GO:GO:0033276 CTD:51616
            HOGENOM:HOG000231730 HOVERGEN:HBG002304 KO:K03133 OrthoDB:EOG45757B
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 EMBL:U40188
            EMBL:BC090332 IPI:IPI00559883 PIR:JC5511 RefSeq:NP_598299.1
            UniGene:Rn.11270 ProteinModelPortal:Q62880 SMR:Q62880 STRING:Q62880
            PhosphoSite:Q62880 Ensembl:ENSRNOT00000003335 GeneID:171152
            KEGG:rno:171152 UCSC:RGD:621116 InParanoid:Q62880 NextBio:621984
            Genevestigator:Q62880 GermOnline:ENSRNOG00000002453 Uniprot:Q62880
        Length = 258

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 58/120 (48%), Positives = 85/120 (70%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             ++ PRDA ++  +LK MG+ DYEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KNAPRDALVMAQILKDMGITDYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|Q17QQ4 [details] [associations]
            symbol:TAF9 "Transcription initiation factor TFIID subunit
            9" species:9913 "Bos taurus" [GO:0071339 "MLL1 complex"
            evidence=ISS] [GO:0070761 "pre-snoRNP complex" evidence=IEA]
            [GO:0070742 "C2H2 zinc finger domain binding" evidence=IEA]
            [GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0060760
            "positive regulation of response to cytokine stimulus"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043066
            "negative regulation of apoptotic process" evidence=IEA]
            [GO:0033613 "activating transcription factor binding" evidence=IEA]
            [GO:0033276 "transcription factor TFTC complex" evidence=IEA]
            [GO:0032435 "negative regulation of proteasomal ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0030914 "STAGA
            complex" evidence=IEA] [GO:0030307 "positive regulation of cell
            growth" evidence=IEA] [GO:0005669 "transcription factor TFIID
            complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
            activity" evidence=IEA] [GO:0003713 "transcription coactivator
            activity" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA]
            [GO:0000125 "PCAF complex" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0006352
            "DNA-dependent transcription, initiation" evidence=IEA]
            InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291 GO:GO:0043066
            GO:GO:0030307 GO:GO:0045944 GO:GO:0006352 GO:GO:0044212
            GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0070555
            GO:GO:0071339 GO:GO:0032435 GO:GO:0070761 GO:GO:0043966
            GO:GO:0004402 GO:GO:0005669 UniGene:Bt.52808 GeneID:532936
            KEGG:bta:532936 CTD:6880 KO:K14535 NextBio:20875852 GO:GO:0030914
            GO:GO:0033276 GO:GO:0000125 HOGENOM:HOG000231730 HOVERGEN:HBG002304
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 EMBL:BC118236
            IPI:IPI00782898 RefSeq:NP_001069443.1 ProteinModelPortal:Q17QQ4
            SMR:Q17QQ4 STRING:Q17QQ4 PRIDE:Q17QQ4 Ensembl:ENSBTAT00000035362
            InParanoid:Q17QQ4 OMA:YATHAKK ArrayExpress:Q17QQ4 GO:GO:0060760
            Uniprot:Q17QQ4
        Length = 264

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|E2R911 [details] [associations]
            symbol:TAF9 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 CTD:6880 KO:K14535
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 OMA:YATHAKK
            EMBL:AAEX03001497 RefSeq:XP_861898.1 Ensembl:ENSCAFT00000012404
            GeneID:480815 KEGG:cfa:480815 Uniprot:E2R911
        Length = 265

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|D6RGK3 [details] [associations]
            symbol:TAF9 "Transcription initiation factor TFIID subunit
            9" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
            transcription, initiation" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 GO:GO:0005634 GO:GO:0003677
            GO:GO:0045944 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
            EMBL:AC145132 HGNC:HGNC:11542 ChiTaRS:TAF9 HOGENOM:HOG000231730
            PANTHER:PTHR12075 EMBL:AC145145 IPI:IPI00968119 SMR:D6RGK3
            Ensembl:ENST00000504109 Ensembl:ENST00000575344 Uniprot:D6RGK3
        Length = 136

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|D6RIE8 [details] [associations]
            symbol:TAF9 "Transcription initiation factor TFIID subunit
            9" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
            transcription, initiation" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 GO:GO:0005634 GO:GO:0003677
            GO:GO:0045944 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
            EMBL:AC145132 HGNC:HGNC:11542 ChiTaRS:TAF9 HOGENOM:HOG000231730
            PANTHER:PTHR12075 EMBL:AC145145 IPI:IPI00967834 SMR:D6RIE8
            Ensembl:ENST00000503245 Ensembl:ENST00000575716 Uniprot:D6RIE8
        Length = 198

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|D6RIV9 [details] [associations]
            symbol:TAF9 "Transcription initiation factor TFIID subunit
            9" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
            transcription, initiation" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 GO:GO:0005634 GO:GO:0003677
            GO:GO:0045944 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
            EMBL:AC145132 HGNC:HGNC:11542 ChiTaRS:TAF9 HOGENOM:HOG000231730
            PANTHER:PTHR12075 EMBL:AC145145 IPI:IPI00967333 SMR:D6RIV9
            Ensembl:ENST00000509462 Ensembl:ENST00000573218 Uniprot:D6RIV9
        Length = 166

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|Q16594 [details] [associations]
            symbol:TAF9 "Transcription initiation factor TFIID subunit
            9" species:9606 "Homo sapiens" [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0033276
            "transcription factor TFTC complex" evidence=IDA] [GO:0005669
            "transcription factor TFIID complex" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0030307 "positive regulation of
            cell growth" evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003713 "transcription coactivator activity" evidence=IMP;IDA]
            [GO:0000125 "PCAF complex" evidence=IDA] [GO:0043966 "histone H3
            acetylation" evidence=IDA] [GO:0004402 "histone acetyltransferase
            activity" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
            [GO:0030914 "STAGA complex" evidence=IDA] [GO:0005654 "nucleoplasm"
            evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=TAS] [GO:0006367 "transcription initiation from
            RNA polymerase II promoter" evidence=TAS] [GO:0006368
            "transcription elongation from RNA polymerase II promoter"
            evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0016032 "viral reproduction" evidence=TAS] [GO:0032435
            "negative regulation of proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IDA] [GO:0002039 "p53 binding"
            evidence=IPI] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0006974
            "response to DNA damage stimulus" evidence=IC] [GO:0043066
            "negative regulation of apoptotic process" evidence=IMP]
            [GO:0070742 "C2H2 zinc finger domain binding" evidence=IPI]
            [GO:0033613 "activating transcription factor binding" evidence=IPI]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
            [GO:0060760 "positive regulation of response to cytokine stimulus"
            evidence=IMP] [GO:0070761 "pre-snoRNP complex" evidence=IDA]
            Reactome:REACT_71 InterPro:IPR003162 InterPro:IPR009072
            Pfam:PF02291 Reactome:REACT_116125 GO:GO:0043066 GO:GO:0030307
            GO:GO:0016032 GO:GO:0045944 GO:GO:0006974 GO:GO:0044212
            GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0006368
            GO:GO:0070555 GO:GO:0006367 GO:GO:0071339 GO:GO:0032435
            GO:GO:0070761 Reactome:REACT_1788 GO:GO:0043966 EMBL:CH471137
            GO:GO:0005669 CTD:6880 eggNOG:COG5094 KO:K14535 UniGene:Hs.653163
            DNASU:6880 GeneID:6880 KEGG:hsa:6880 GeneCards:GC05M068646
            HGNC:HGNC:11542 HPA:CAB005361 PharmGKB:PA36317 ChiTaRS:TAF9
            GenomeRNAi:6880 NextBio:26873 GermOnline:ENSG00000185057
            GO:GO:0030914 GO:GO:0033276 GO:GO:0000125 HOGENOM:HOG000231730
            HOVERGEN:HBG002304 PANTHER:PTHR12075 GO:GO:0060760 EMBL:U25112
            EMBL:U21858 EMBL:U30504 EMBL:BT019652 EMBL:AY189986 EMBL:BC003400
            EMBL:BC033320 IPI:IPI00002993 PIR:I39141 RefSeq:NP_001015892.1
            RefSeq:NP_003178.1 ProteinModelPortal:Q16594 SMR:Q16594
            DIP:DIP-435N IntAct:Q16594 MINT:MINT-2860193 STRING:Q16594
            PhosphoSite:Q16594 DMDM:2498981 PaxDb:Q16594 PRIDE:Q16594
            Ensembl:ENST00000217893 Ensembl:ENST00000328663
            Ensembl:ENST00000506736 UCSC:uc003jwc.1 MIM:600822
            neXtProt:NX_Q16594 InParanoid:Q16594 PhylomeDB:Q16594
            ArrayExpress:Q16594 Bgee:Q16594 CleanEx:HS_TAF9
            Genevestigator:Q16594 Uniprot:Q16594
        Length = 264

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129


>MGI|MGI:1888697 [details] [associations]
            symbol:Taf9 "TAF9 RNA polymerase II, TATA box binding
            protein (TBP)-associated factor" species:10090 "Mus musculus"
            [GO:0000125 "PCAF complex" evidence=ISO] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0002039 "p53 binding" evidence=ISO]
            [GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003713
            "transcription coactivator activity" evidence=ISO] [GO:0004017
            "adenylate kinase activity" evidence=ISO] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005654
            "nucleoplasm" evidence=ISO] [GO:0005669 "transcription factor TFIID
            complex" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0015030 "Cajal body" evidence=ISO]
            [GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
            "phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
            evidence=IEA] [GO:0030307 "positive regulation of cell growth"
            evidence=ISO] [GO:0030914 "STAGA complex" evidence=ISO] [GO:0032435
            "negative regulation of proteasomal ubiquitin-dependent protein
            catabolic process" evidence=ISO] [GO:0033276 "transcription factor
            TFTC complex" evidence=ISO] [GO:0033613 "activating transcription
            factor binding" evidence=ISO] [GO:0043066 "negative regulation of
            apoptotic process" evidence=ISO] [GO:0043966 "histone H3
            acetylation" evidence=ISO] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISO] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISO;IMP]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0060760 "positive regulation of response to cytokine stimulus"
            evidence=ISO] [GO:0070555 "response to interleukin-1" evidence=ISO]
            [GO:0070742 "C2H2 zinc finger domain binding" evidence=ISO]
            [GO:0070761 "pre-snoRNP complex" evidence=ISO] [GO:0071339 "MLL1
            complex" evidence=ISO] InterPro:IPR003162 InterPro:IPR009072
            Pfam:PF02291 MGI:MGI:1888697 GO:GO:0043066 GO:GO:0030307
            GO:GO:0003677 GO:GO:0045944 GO:GO:0006352 GO:GO:0044212
            GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0070555
            GO:GO:0071339 GO:GO:0032435 GO:GO:0070761 GO:GO:0043966
            GO:GO:0004402 GO:GO:0005669 CTD:6880 eggNOG:COG5094 KO:K14535
            GO:GO:0030914 GO:GO:0033276 GO:GO:0000125 HOGENOM:HOG000231730
            HOVERGEN:HBG002304 OrthoDB:EOG45757B PANTHER:PTHR12075
            GeneTree:ENSGT00390000001626 OMA:YATHAKK GO:GO:0060760
            EMBL:AF305839 EMBL:AK009322 EMBL:BC042723 EMBL:BC043028
            EMBL:BC108348 IPI:IPI00128702 RefSeq:NP_001015889.1
            RefSeq:NP_081415.1 UniGene:Mm.301148 ProteinModelPortal:Q8VI33
            SMR:Q8VI33 DIP:DIP-48737N IntAct:Q8VI33 STRING:Q8VI33
            PhosphoSite:Q8VI33 PaxDb:Q8VI33 PRIDE:Q8VI33 DNASU:108143
            Ensembl:ENSMUST00000084721 Ensembl:ENSMUST00000167256 GeneID:108143
            KEGG:mmu:108143 UCSC:uc007rrf.2 InParanoid:Q8VI33 NextBio:360144
            Bgee:Q8VI33 Genevestigator:Q8VI33 GermOnline:ENSMUSG00000052293
            Uniprot:Q8VI33
        Length = 264

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129


>RGD|727861 [details] [associations]
            symbol:Taf9 "TAF9 RNA polymerase II, TATA box binding protein
            (TBP)-associated factor" species:10116 "Rattus norvegicus"
            [GO:0000125 "PCAF complex" evidence=ISO] [GO:0002039 "p53 binding"
            evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003713 "transcription
            coactivator activity" evidence=ISO] [GO:0004017 "adenylate kinase
            activity" evidence=ISO] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
            "nucleoplasm" evidence=ISO] [GO:0005669 "transcription factor TFIID
            complex" evidence=ISO] [GO:0006352 "DNA-dependent transcription,
            initiation" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0015030 "Cajal body" evidence=ISO] [GO:0030307
            "positive regulation of cell growth" evidence=ISO] [GO:0030914
            "STAGA complex" evidence=ISO] [GO:0032435 "negative regulation of
            proteasomal ubiquitin-dependent protein catabolic process"
            evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
            evidence=ISO] [GO:0033613 "activating transcription factor binding"
            evidence=ISO] [GO:0043066 "negative regulation of apoptotic
            process" evidence=ISO] [GO:0043966 "histone H3 acetylation"
            evidence=ISO] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0060760 "positive regulation of response to cytokine stimulus"
            evidence=ISO] [GO:0070555 "response to interleukin-1" evidence=ISO]
            [GO:0070742 "C2H2 zinc finger domain binding" evidence=ISO]
            [GO:0070761 "pre-snoRNP complex" evidence=ISO] [GO:0071339 "MLL1
            complex" evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
            [GO:0004402 "histone acetyltransferase activity" evidence=ISO]
            InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291 RGD:727861
            GO:GO:0043066 GO:GO:0030307 GO:GO:0045944 GO:GO:0006352
            GO:GO:0044212 GO:GO:0003713 Gene3D:1.10.20.10 SUPFAM:SSF47113
            GO:GO:0070555 GO:GO:0071339 GO:GO:0032435 GO:GO:0070761
            GO:GO:0043966 GO:GO:0004402 GO:GO:0005669 CTD:6880 eggNOG:COG5094
            KO:K14535 UniGene:Rn.8139 GeneID:373541 KEGG:rno:373541
            NextBio:692400 GermOnline:ENSRNOG00000039848 GO:GO:0030914
            GO:GO:0033276 GO:GO:0000125 HOGENOM:HOG000231730 HOVERGEN:HBG002304
            PANTHER:PTHR12075 GO:GO:0060760 EMBL:BC091109 EMBL:AY325235
            EMBL:AY359819 IPI:IPI00421830 RefSeq:NP_001032387.1
            RefSeq:NP_908937.2 ProteinModelPortal:Q5BKE0 SMR:Q5BKE0
            STRING:Q5BKE0 PRIDE:Q5BKE0 Ensembl:ENSRNOT00000042488
            Ensembl:ENSRNOT00000061165 UCSC:RGD:727861 InParanoid:Q5BKE0
            ArrayExpress:Q5BKE0 Genevestigator:Q5BKE0 Uniprot:Q5BKE0
        Length = 264

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 57/120 (47%), Positives = 86/120 (71%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129


>ZFIN|ZDB-GENE-030131-204 [details] [associations]
            symbol:taf9 "TAF9 RNA polymerase II, TATA box
            binding protein (TBP)-associated factor" species:7955 "Danio rerio"
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
            InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            ZFIN:ZDB-GENE-030131-204 GO:GO:0006352 Gene3D:1.10.20.10
            SUPFAM:SSF47113 CTD:6880 eggNOG:COG5094 KO:K14535
            HOVERGEN:HBG002304 PANTHER:PTHR12075 EMBL:BC122276 IPI:IPI00786683
            UniGene:Dr.1499 ProteinModelPortal:Q0P450 SMR:Q0P450 STRING:Q0P450
            PRIDE:Q0P450 KEGG:dre:321485 InParanoid:Q0P450 NextBio:20807397
            ArrayExpress:Q0P450 Bgee:Q0P450 Uniprot:Q0P450
        Length = 248

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 54/118 (45%), Positives = 87/118 (73%)

Query:    33 LPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDV 92
             +P+DA+++  +LK MG+ +YEPRV++Q LE  YRYV  ++ DA++YS HA K+++D DD+
Sbjct:     7 VPKDAQVMMQILKDMGITEYEPRVVNQMLEFTYRYVTTIIEDAKIYSAHAKKSSVDADDI 66

Query:    93 KLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             +LA+Q +V+ SF+ PP R+ LL++A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    67 RLAIQCRVDQSFTSPPPRDFLLDIARQKNQTPLPLIKPYTGPRLPPDRYCLTAPNYRL 124


>UNIPROTKB|E1BU14 [details] [associations]
            symbol:TAF9 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 CTD:6880 KO:K14535
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 OMA:YATHAKK
            EMBL:AADN02013138 IPI:IPI00590401 RefSeq:XP_420153.2
            UniGene:Gga.6259 Ensembl:ENSGALT00000006654 GeneID:422152
            KEGG:gga:422152 NextBio:20824830 Uniprot:E1BU14
        Length = 255

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 56/117 (47%), Positives = 85/117 (72%)

Query:    34 PRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVK 93
             P+DA+++  +LK MG+ +YEPRVI+Q LE  YRYV  +L DA++YS HA K+++D DDV+
Sbjct:    13 PKDAQVMAQILKDMGITEYEPRVINQMLEFAYRYVTTILEDAKIYSSHAKKSSVDADDVR 72

Query:    94 LAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             LA+Q + + SF+ PP R+ LL++A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    73 LAIQCRTDQSFTSPPPRDFLLDIARQKNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129


>MGI|MGI:3039562 [details] [associations]
            symbol:Taf9b "TAF9B RNA polymerase II, TATA box binding
            protein (TBP)-associated factor" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0030307 "positive regulation of
            cell growth" evidence=ISO] [GO:0033276 "transcription factor TFTC
            complex" evidence=ISO] [GO:0043066 "negative regulation of
            apoptotic process" evidence=ISO] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 MGI:MGI:3039562 GO:GO:0005634
            GO:GO:0006355 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
            eggNOG:COG5094 CTD:51616 HOGENOM:HOG000231730 HOVERGEN:HBG002304
            KO:K03133 OrthoDB:EOG45757B PANTHER:PTHR12075 EMBL:AK131710
            EMBL:AK135097 EMBL:AL833778 EMBL:BC051635 EMBL:BC066223
            IPI:IPI00330677 RefSeq:NP_001001176.2 RefSeq:NP_001161460.1
            UniGene:Mm.19440 ProteinModelPortal:Q6NZA9 SMR:Q6NZA9 STRING:Q6NZA9
            PhosphoSite:Q6NZA9 PaxDb:Q6NZA9 PRIDE:Q6NZA9
            Ensembl:ENSMUST00000055497 GeneID:407786 KEGG:mmu:407786
            GeneTree:ENSGT00390000001626 InParanoid:A2AP80 NextBio:407183
            Bgee:Q6NZA9 Genevestigator:Q6NZA9 GermOnline:ENSMUSG00000047242
            Uniprot:Q6NZA9
        Length = 249

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 57/120 (47%), Positives = 85/120 (70%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             ++ PRDA ++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|D6RIY1 [details] [associations]
            symbol:TAF9 "Transcription initiation factor TFIID subunit
            9" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
            transcription, initiation" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 GO:GO:0005634 GO:GO:0003677
            GO:GO:0045944 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
            EMBL:AC145132 HGNC:HGNC:11542 ChiTaRS:TAF9 HOGENOM:HOG000231730
            PANTHER:PTHR12075 EMBL:AC145145 IPI:IPI00966393 SMR:D6RIY1
            Ensembl:ENST00000512152 Ensembl:ENST00000574082 Uniprot:D6RIY1
        Length = 127

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 56/118 (47%), Positives = 84/118 (71%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNY 148
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+ PLP      G  LPP++  L +PNY
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNY 127


>UNIPROTKB|J9P1X2 [details] [associations]
            symbol:TAF9B "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 OMA:YVTSILD
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 EMBL:AAEX03026558
            Ensembl:ENSCAFT00000048398 Uniprot:J9P1X2
        Length = 289

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 67/155 (43%), Positives = 97/155 (62%)

Query:     2 PDREKWG---NPASFP-STVNLLQKAEEMAE--GDEDLPRDAKIVKSLLKSMGVEDYEPR 55
             PD E W     PAS P S  +  Q   E  +    ++ PRDA ++  +LK MG+ +YEPR
Sbjct:    12 PD-EGWSVSEEPASCPLSPDDGWQDNMESGKMAPPKNAPRDALVMAQILKDMGITEYEPR 70

Query:    56 VIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLE 115
             VI+Q LE  +RYV  +L DA++YS HA K  +D DDV+LA+Q + + SF+ PP R+ LL+
Sbjct:    71 VINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDADDVRLAIQCRADQSFTSPPPRDFLLD 130

Query:   116 LAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             +A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:   131 IARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 165


>UNIPROTKB|G3MWV4 [details] [associations]
            symbol:TAF9B "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 CTD:51616 KO:K03133
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 EMBL:DAAA02072489
            RefSeq:NP_001179078.1 UniGene:Bt.13788 Ensembl:ENSBTAT00000065275
            GeneID:538983 KEGG:bta:538983 NextBio:20877707 Uniprot:G3MWV4
        Length = 251

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 56/120 (46%), Positives = 84/120 (70%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             ++ PRDA ++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K  +D D
Sbjct:    10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTSILDDAKIYSSHAKKPNVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|G5E509 [details] [associations]
            symbol:TAF9B "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
            evidence=IEA] [GO:0030307 "positive regulation of cell growth"
            evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0006352
            "DNA-dependent transcription, initiation" evidence=IEA]
            InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291 GO:GO:0043066
            GO:GO:0030307 GO:GO:0006352 GO:GO:0000122 Gene3D:1.10.20.10
            SUPFAM:SSF47113 GO:GO:0005669 GO:GO:0033276 OMA:YVTSILD
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 EMBL:DAAA02072489
            Ensembl:ENSBTAT00000001188 Uniprot:G5E509
        Length = 264

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 56/120 (46%), Positives = 84/120 (70%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             ++ PRDA ++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K  +D D
Sbjct:    10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTSILDDAKIYSSHAKKPNVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|F1RPF8 [details] [associations]
            symbol:LOC100516658 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
            evidence=IEA] [GO:0030307 "positive regulation of cell growth"
            evidence=IEA] [GO:0005669 "transcription factor TFIID complex"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0006352
            "DNA-dependent transcription, initiation" evidence=IEA]
            InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291 GO:GO:0043066
            GO:GO:0030307 GO:GO:0006352 GO:GO:0000122 Gene3D:1.10.20.10
            SUPFAM:SSF47113 GO:GO:0005669 GO:GO:0033276 KO:K03133
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 EMBL:CU407109
            RefSeq:XP_003135250.1 UniGene:Ssc.41716 Ensembl:ENSSSCT00000029310
            GeneID:100516658 KEGG:ssc:100516658 Uniprot:F1RPF8
        Length = 251

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 56/120 (46%), Positives = 84/120 (70%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             ++ PRDA ++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K  +D D
Sbjct:    10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTSILDDAKIYSSHAKKPNVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|I3LFP6 [details] [associations]
            symbol:LOC100516658 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 OMA:YVTSILD
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 EMBL:CU407109
            Ensembl:ENSSSCT00000023290 Uniprot:I3LFP6
        Length = 254

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 56/120 (46%), Positives = 84/120 (70%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             ++ PRDA ++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K  +D D
Sbjct:    10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTSILDDAKIYSSHAKKPNVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|Q9HBM6 [details] [associations]
            symbol:TAF9B "Transcription initiation factor TFIID subunit
            9B" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
            transcription, initiation" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0012501 "programmed
            cell death" evidence=IEA] [GO:0014070 "response to organic cyclic
            compound" evidence=IEA] [GO:0033276 "transcription factor TFTC
            complex" evidence=IDA] [GO:0005669 "transcription factor TFIID
            complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0030307 "positive regulation of cell growth" evidence=IMP]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0003714
            "transcription corepressor activity" evidence=IC]
            InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291 GO:GO:0003714
            GO:GO:0043066 GO:GO:0030307 GO:GO:0006352 GO:GO:0000122
            Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0014070 GO:GO:0012501
            EMBL:CH471104 GO:GO:0005669 eggNOG:COG5094 GO:GO:0033276
            EMBL:AL049589 EMBL:AF077053 EMBL:AF220509 EMBL:BC009566
            EMBL:BC010350 EMBL:BC071649 EMBL:BC146952 EMBL:BC146960
            IPI:IPI00642105 RefSeq:NP_057059.2 UniGene:Hs.592248
            ProteinModelPortal:Q9HBM6 SMR:Q9HBM6 IntAct:Q9HBM6
            MINT:MINT-1441128 STRING:Q9HBM6 PhosphoSite:Q9HBM6 DMDM:74752778
            PRIDE:Q9HBM6 DNASU:51616 Ensembl:ENST00000341864 GeneID:51616
            KEGG:hsa:51616 UCSC:uc004eda.3 CTD:51616 GeneCards:GC0XM077385
            H-InvDB:HIX0176727 HGNC:HGNC:17306 HPA:HPA045275 MIM:300754
            neXtProt:NX_Q9HBM6 PharmGKB:PA38225 HOGENOM:HOG000231730
            HOVERGEN:HBG002304 InParanoid:Q9HBM6 KO:K03133 OMA:YVTSILD
            OrthoDB:EOG45757B PhylomeDB:Q9HBM6 GenomeRNAi:51616 NextBio:55524
            Bgee:Q9HBM6 CleanEx:HS_TAF9B Genevestigator:Q9HBM6
            GermOnline:ENSG00000187325 PANTHER:PTHR12075 Uniprot:Q9HBM6
        Length = 251

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 56/120 (46%), Positives = 84/120 (70%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             ++ PRDA ++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K  +D D
Sbjct:    10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>UNIPROTKB|E2RRB3 [details] [associations]
            symbol:TAF9B "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113 PANTHER:PTHR12075
            GeneTree:ENSGT00390000001626 EMBL:AAEX03026558
            Ensembl:ENSCAFT00000027371 Uniprot:E2RRB3
        Length = 262

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 55/120 (45%), Positives = 83/120 (69%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             ++ PRDA ++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K  +D D
Sbjct:    10 KNAPRDALVMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPNVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             DV+LA+Q + + SF+ PP R+ +L +A+ +N+ PLP      G  LPP++  L +PNY+L
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFILHIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129


>FB|FBgn0000617 [details] [associations]
            symbol:e(y)1 "enhancer of yellow 1" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0001075
            "RNA polymerase II core promoter sequence-specific DNA binding
            transcription factor activity involved in preinitiation complex
            assembly" evidence=IDA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0005669 "transcription
            factor TFIID complex" evidence=ISS;NAS;IDA;IPI] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=NAS] [GO:0006367 "transcription initiation from RNA
            polymerase II promoter" evidence=ISS] [GO:0008134 "transcription
            factor binding" evidence=IPI] [GO:0000124 "SAGA complex"
            evidence=IDA;IPI] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            GO:GO:0006355 EMBL:AE014298 Gene3D:1.10.20.10 SUPFAM:SSF47113
            GO:GO:0000124 GO:GO:0005669 eggNOG:COG5094 GO:GO:0051123 PDB:1TAF
            PDBsum:1TAF KO:K03133 PANTHER:PTHR12075
            GeneTree:ENSGT00390000001626 EMBL:U06458 EMBL:L29540 EMBL:AY061338
            PIR:A49067 RefSeq:NP_523391.3 UniGene:Dm.2673
            ProteinModelPortal:Q27272 SMR:Q27272 DIP:DIP-239N IntAct:Q27272
            STRING:Q27272 PaxDb:Q27272 PRIDE:Q27272 EnsemblMetazoa:FBtr0074463
            GeneID:32762 KEGG:dme:Dmel_CG6474 CTD:32762 FlyBase:FBgn0000617
            InParanoid:Q27272 OMA:ANHARKK OrthoDB:EOG4W6MC2 PhylomeDB:Q27272
            EvolutionaryTrace:Q27272 GenomeRNAi:32762 NextBio:780232
            Bgee:Q27272 GermOnline:CG6474 Uniprot:Q27272
        Length = 278

 Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
 Identities = 54/118 (45%), Positives = 81/118 (68%)

Query:    33 LPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCDDV 92
             +P+DA+++ S+LK + V++YEPRV++Q LE  +RYV  +L DA+VY+ HA K TID DDV
Sbjct:    18 VPKDAQVIMSILKELNVQEYEPRVVNQLLEFTFRYVTCILDDAKVYANHARKKTIDLDDV 77

Query:    93 KLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNYQL 150
             +LA +  ++ SF+ P  R VL ++A  RN +PLP      G+ LPP++  L   NY+L
Sbjct:    78 RLATEVTLDKSFTGPLERHVLAKVADVRNSMPLPPIKPHCGLRLPPDRYCLTGVNYKL 135


>UNIPROTKB|D6RHW1 [details] [associations]
            symbol:TAF9 "Transcription initiation factor TFIID subunit
            9" species:9606 "Homo sapiens" [GO:0006352 "DNA-dependent
            transcription, initiation" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 GO:GO:0005634 GO:GO:0003677
            GO:GO:0045944 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
            EMBL:AC145132 HGNC:HGNC:11542 ChiTaRS:TAF9 PANTHER:PTHR12075
            EMBL:AC145145 IPI:IPI00967629 SMR:D6RHW1 Ensembl:ENST00000508954
            Ensembl:ENST00000576134 HOGENOM:HOG000006916 Uniprot:D6RHW1
        Length = 102

 Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 45/92 (48%), Positives = 70/92 (76%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNTIDCD 90
             + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA K T+D D
Sbjct:    10 KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query:    91 DVKLAVQSKVNSSFSQPPAREVLLELAKNRNK 122
             DV+LA+Q + + SF+ PP R+ LL++A+ RN+
Sbjct:    70 DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQ 101


>POMBASE|SPAC12G12.05c [details] [associations]
            symbol:taf9 "SAGA complex/ transcription initiation
            factor Taf9" species:4896 "Schizosaccharomyces pombe" [GO:0000124
            "SAGA complex" evidence=IDA] [GO:0000790 "nuclear chromatin"
            evidence=IC] [GO:0000991 "core RNA polymerase II binding
            transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005669 "transcription factor TFIID complex"
            evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006338
            "chromatin remodeling" evidence=IC] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006367
            "transcription initiation from RNA polymerase II promoter"
            evidence=ISO] [GO:0016573 "histone acetylation" evidence=ISO]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            PomBase:SPAC12G12.05c GO:GO:0005829 EMBL:CU329670 GO:GO:0006355
            GenomeReviews:CU329670_GR GO:GO:0016573 GO:GO:0006338 GO:GO:0000790
            Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0006367
            GO:GO:0000991 GO:GO:0005669 eggNOG:COG5094 KO:K03133
            PANTHER:PTHR12075 PIR:S62536 RefSeq:NP_592893.1
            ProteinModelPortal:Q09869 STRING:Q09869
            EnsemblFungi:SPAC12G12.05c.1 GeneID:2543133 KEGG:spo:SPAC12G12.05c
            HOGENOM:HOG000204913 OMA:RLPPEKY OrthoDB:EOG40312T NextBio:20804160
            Uniprot:Q09869
        Length = 163

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 54/126 (42%), Positives = 79/126 (62%)

Query:    30 DEDL--PRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHA-GKNT 86
             DE +  P+D +++  +L S+GV  Y   V  Q L   +RY   ++ D+QVY+EH+ G+N 
Sbjct:     8 DESIKGPKDVRLIHLILSSLGVPSYSQTVPLQLLTFAHRYTQQLIQDSQVYAEHSRGQNA 67

Query:    87 -IDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLIS 145
              I  +DV+LAV S++N SF+ PP +E LLELA  RN+ PLP+     G  LPPE+  L  
Sbjct:    68 PISVEDVRLAVASQINHSFTGPPPKEFLLELAMERNRKPLPQIQPSYGFRLPPEKYCLTQ 127

Query:   146 PNYQLS 151
             PN+ +S
Sbjct:   128 PNWIVS 133


>CGD|CAL0001873 [details] [associations]
            symbol:orf19.1111 species:5476 "Candida albicans" [GO:0000124
            "SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
            "transcription factor TFIID complex" evidence=IEA] [GO:0032947
            "protein complex scaffold" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0016573 "histone acetylation"
            evidence=IEA] [GO:0051123 "RNA polymerase II transcriptional
            preinitiation complex assembly" evidence=IEA] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 CGD:CAL0001873 GO:GO:0006352
            Gene3D:1.10.20.10 SUPFAM:SSF47113 EMBL:AACQ01000210 eggNOG:COG5094
            KO:K03133 PANTHER:PTHR12075 RefSeq:XP_711163.1
            ProteinModelPortal:Q59N77 STRING:Q59N77 GeneID:3647227
            KEGG:cal:CaO19.1111 Uniprot:Q59N77
        Length = 232

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 52/163 (31%), Positives = 88/163 (53%)

Query:     2 PDREKWGNPASFPSTV---NLLQKAEEMAEGDEDL-PRDAKIVKSLLKSMGVEDYEPRVI 57
             P +++   P+S  +T    N  Q +++  E  E + PRD +++  +  +  V +Y+  V 
Sbjct:    44 PQQQQQQQPSSSITTTDNNNNNQTSQQSQEKKEKIIPRDVRLLHLIFATHAVHNYQDHVP 103

Query:    58 HQFLELWYRYVVDVLTDAQVYSEH-----AGKN-------TIDCDDVKLAVQSKVNSSFS 105
              Q ++  +RY   VL DA VY++H     A  N       T++ DD++LA+ ++ N  F 
Sbjct:   104 LQLMDFAHRYTKSVLKDALVYNDHSKPINANTNLNSNTNATVNTDDIRLAIAARSNYQFK 163

Query:   106 QPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLISPNY 148
               P +E+LLELA+ RN  PLP  I   G+ LPPE+  L + ++
Sbjct:   164 PVPPKELLLELAQERNSRPLPPVIPRWGLNLPPEKYCLTAKDW 206


>SGD|S000004849 [details] [associations]
            symbol:TAF9 "Subunit (17 kDa) of TFIID and SAGA complexes"
            species:4932 "Saccharomyces cerevisiae" [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0001075 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity involved in preinitiation complex
            assembly" evidence=IC] [GO:0005669 "transcription factor TFIID
            complex" evidence=IDA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IDA] [GO:0032947 "protein
            complex scaffold" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046695 "SLIK (SAGA-like) complex" evidence=IDA] [GO:0006352
            "DNA-dependent transcription, initiation" evidence=IEA] [GO:0016568
            "chromatin modification" evidence=IDA] [GO:0016573 "histone
            acetylation" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
            [GO:0051123 "RNA polymerase II transcriptional preinitiation
            complex assembly" evidence=IMP] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 SGD:S000004849 GO:GO:0006355
            GO:GO:0016573 GO:GO:0003682 EMBL:BK006946 Gene3D:1.10.20.10
            SUPFAM:SSF47113 GO:GO:0000124 GO:GO:0046695 GO:GO:0032947
            EMBL:Z49939 GO:GO:0005669 eggNOG:COG5094 GO:GO:0051123 KO:K03133
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 HOGENOM:HOG000204913
            OMA:RLPPEKY OrthoDB:EOG40312T PIR:S57603 RefSeq:NP_013963.1
            ProteinModelPortal:Q05027 SMR:Q05027 DIP:DIP-925N IntAct:Q05027
            MINT:MINT-406129 STRING:Q05027 PaxDb:Q05027 PeptideAtlas:Q05027
            EnsemblFungi:YMR236W GeneID:855276 KEGG:sce:YMR236W CYGD:YMR236w
            NextBio:978900 Genevestigator:Q05027 GermOnline:YMR236W
            Uniprot:Q05027
        Length = 157

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 41/125 (32%), Positives = 70/125 (56%)

Query:    31 EDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKNT---- 86
             E+ PRD +++  LL S  +  YE +V  Q ++  +RY   VL DA VY+++AG       
Sbjct:    27 EETPRDVRLLHLLLASQSIHQYEDQVPLQLMDFAHRYTQGVLKDALVYNDYAGSGNSAGS 86

Query:    87 -IDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTLIS 145
              +  +D++LA+ ++    F     +E++L+LA  RNK  LP+ +   G+ LPPE+  L +
Sbjct:    87 GLGVEDIRLAIAARTQYQFKPTAPKELMLQLAAERNKKALPQVMGTWGVRLPPEKYCLTA 146

Query:   146 PNYQL 150
               + L
Sbjct:   147 KEWDL 151


>UNIPROTKB|K7GKR1 [details] [associations]
            symbol:LOC100516658 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
            evidence=IEA] InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            Gene3D:1.10.20.10 PANTHER:PTHR12075 GeneTree:ENSGT00390000001626
            EMBL:CU407109 Ensembl:ENSSSCT00000033907 Uniprot:K7GKR1
        Length = 205

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 33/74 (44%), Positives = 50/74 (67%)

Query:    77 VYSEHAGKNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPL 136
             +YS HA K  +D DDV+LA+Q + + SF+ PP R+ LL++A+ +N+ PLP      G  L
Sbjct:     2 IYSSHAKKPNVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRL 61

Query:   137 PPEQDTLISPNYQL 150
             PP++  L +PNY+L
Sbjct:    62 PPDRYCLTAPNYRL 75


>WB|WBGene00006391 [details] [associations]
            symbol:taf-9 species:6239 "Caenorhabditis elegans"
            [GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0040015 "negative regulation of multicellular
            organism growth" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0009794 "regulation of
            mitotic cell cycle, embryonic" evidence=IMP] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] InterPro:IPR003162 InterPro:IPR009072 Pfam:PF02291
            GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0045944
            GO:GO:0040011 GO:GO:0006352 Gene3D:1.10.20.10 SUPFAM:SSF47113
            GO:GO:0040015 GO:GO:0009794 eggNOG:COG5094 KO:K03133
            PANTHER:PTHR12075 GeneTree:ENSGT00390000001626 EMBL:Z81120
            PIR:T24863 RefSeq:NP_499814.1 ProteinModelPortal:O45784 SMR:O45784
            DIP:DIP-27361N IntAct:O45784 MINT:MINT-1044204 STRING:O45784
            PaxDb:O45784 EnsemblMetazoa:T12D8.7 GeneID:176798
            KEGG:cel:CELE_T12D8.7 UCSC:T12D8.7 CTD:176798 WormBase:T12D8.7
            HOGENOM:HOG000021254 InParanoid:O45784 OMA:ANDKNQQ NextBio:894046
            Uniprot:O45784
        Length = 183

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 35/125 (28%), Positives = 66/125 (52%)

Query:    24 EEMAEGDEDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG 83
             E  A G +   ++A  V S+L   G+++++PRV+   +++ Y     +L  +   S HA 
Sbjct:    10 ETTASGTDGHSKEALAVISMLHECGIQEFDPRVVSMLMDVQYAVTSKILQMSSGLSRHAE 69

Query:    84 KNTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAGRGIPLPPEQDTL 143
             K  I+ +DV+ A    +    +  P RE +L+LA ++N+ PLP+     G+ LP ++   
Sbjct:    70 KAQIEAEDVQTAADM-LGVLTTNAPDREKILQLANDKNQQPLPQIRHNYGLKLPNDRFCQ 128

Query:   144 ISPNY 148
             +  N+
Sbjct:   129 LQQNF 133


>ASPGD|ASPL0000059806 [details] [associations]
            symbol:AN0794 species:162425 "Emericella nidulans"
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0000124 "SAGA complex"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0046695 "SLIK
            (SAGA-like) complex" evidence=IEA] [GO:0005669 "transcription
            factor TFIID complex" evidence=IEA] [GO:0032947 "protein complex
            scaffold" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
            [GO:0051123 "RNA polymerase II transcriptional preinitiation
            complex assembly" evidence=IEA] InterPro:IPR003162
            InterPro:IPR009072 Pfam:PF02291 EMBL:BN001308 GO:GO:0006352
            Gene3D:1.10.20.10 SUPFAM:SSF47113 GO:GO:0003743 EMBL:AACD01000013
            eggNOG:COG5094 KO:K03133 PANTHER:PTHR12075 HOGENOM:HOG000204913
            OrthoDB:EOG40312T RefSeq:XP_658398.1 ProteinModelPortal:Q5BF86
            STRING:Q5BF86 EnsemblFungi:CADANIAT00001867 GeneID:2876572
            KEGG:ani:AN0794.2 OMA:YRYTSGV Uniprot:Q5BF86
        Length = 287

 Score = 94 (38.1 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
 Identities = 24/66 (36%), Positives = 33/66 (50%)

Query:    10 PASFPSTVNLLQKAEEMAEGDEDLPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVV 69
             PAS P+ +      +    G    PRD +++  LL + GV  Y+ RV  Q L+  YRY  
Sbjct:    52 PASQPAQIPSTSLKDS---GKSRRPRDVRLIHMLLAAQGVTAYQERVPLQLLDFAYRYTS 108

Query:    70 DVLTDA 75
              VL DA
Sbjct:   109 GVLQDA 114

 Score = 68 (29.0 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
 Identities = 15/68 (22%), Positives = 36/68 (52%)

Query:    85 NTIDCDDVKLAVQSKVNSSFSQPPAREVLLELAKNRNKIPLPKSIAG--RGIPLPPEQDT 142
             N++    ++L++ S+++  F     +E L+++A  RN++ LP +  G   G   P   ++
Sbjct:   142 NSVTLPALRLSIASRLHYQFQTGLPKEFLMDVAAERNRVALPGATRGFDAGAGKPAASNS 201

Query:   143 LISPNYQL 150
             ++    +L
Sbjct:   202 VLMAGMRL 209


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.313   0.131   0.376    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      200       180   0.00092  109 3  11 23  0.49    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  30
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  153 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.47u 0.13s 19.60t   Elapsed:  00:00:00
  Total cpu time:  19.47u 0.13s 19.60t   Elapsed:  00:00:00
  Start:  Fri May 10 01:37:31 2013   End:  Fri May 10 01:37:31 2013

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