Query 028997
Match_columns 200
No_of_seqs 129 out of 576
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 09:12:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ec1_A Nucleoporin 50 kDa; ran 100.0 6.2E-37 2.1E-41 240.3 12.7 116 68-198 6-124 (125)
2 1xke_A RAN-binding protein 2; 100.0 1.8E-35 6.2E-40 233.0 12.9 115 69-197 2-118 (130)
3 1rrp_B Nuclear pore complex pr 100.0 1.2E-34 4.3E-39 229.2 13.9 117 67-197 14-132 (134)
4 1k5d_B RAN-specific GTPase-act 100.0 3.2E-34 1.1E-38 241.1 14.5 118 67-196 38-158 (201)
5 4hat_B RAN-specific GTPase-act 100.0 2.3E-34 7.8E-39 229.9 12.9 115 68-196 16-133 (140)
6 3m1i_B RAN-specific GTPase-act 100.0 4.7E-34 1.6E-38 238.2 13.2 115 68-196 67-184 (191)
7 3n7c_A ABR034WP; nuclear pore 100.0 1.5E-33 5.3E-38 222.4 12.1 115 67-197 3-119 (130)
8 2y8g_A Ranbp3-B, RAN-binding p 100.0 7.8E-32 2.7E-36 214.5 12.4 115 67-195 7-123 (138)
9 2crf_A RAN binding protein 3; 100.0 1.9E-31 6.6E-36 214.9 14.8 114 68-195 20-135 (150)
10 1qc6_A EVH1 domain from ENA/VA 99.5 4.2E-13 1.4E-17 105.2 12.4 102 73-197 2-109 (130)
11 1ddw_A GLGF-domain protein hom 99.0 6.4E-09 2.2E-13 80.6 13.3 103 73-196 2-106 (120)
12 1i2h_A PSD-ZIP45(homer-1C/VESL 99.0 3.8E-09 1.3E-13 86.4 12.4 103 73-196 7-111 (168)
13 1evh_A WH1 domain, protein (ME 98.6 5.2E-07 1.8E-11 68.9 12.4 101 73-196 2-107 (112)
14 1egx_A VAsp, vasodilator-stimu 98.6 6.4E-07 2.2E-11 68.7 12.0 101 74-197 3-110 (115)
15 1xod_A Spred1; sprouty, EVH1, 98.5 1.4E-06 4.8E-11 67.1 10.9 107 73-197 2-112 (118)
16 2jp2_A Spred-2, sprouty-relate 98.5 4E-06 1.4E-10 65.4 13.3 108 72-197 10-121 (126)
17 3syx_A Sprouty-related, EVH1 d 97.6 0.0012 4E-08 51.8 12.4 103 76-196 12-118 (130)
18 1mke_A WIP - N-WAsp, fusion pr 97.0 0.0094 3.2E-07 47.7 11.2 99 75-196 41-139 (152)
19 2ifs_A N-WAsp, wiskott-aldrich 97.0 0.0094 3.2E-07 48.4 11.3 99 75-196 58-156 (169)
20 2lyd_A Decapping protein 1; DC 89.1 5.3 0.00018 30.8 10.7 92 80-196 36-130 (134)
21 2qkl_A DCP1 protein, SPBC3B9.2 80.8 17 0.00057 27.7 10.8 92 80-197 31-125 (127)
22 2oqb_A Histone-arginine methyl 77.5 21 0.00072 27.1 10.6 51 131-196 54-105 (117)
23 1y5o_A TFB1, RNA polymerase II 36.4 1.4E+02 0.0046 22.5 10.4 27 170-196 81-107 (115)
24 1pfj_A TFIIH basal transcripti 32.2 1.5E+02 0.0052 21.9 8.3 78 96-198 16-101 (108)
25 2edn_A Myosin-binding protein 24.1 1.6E+02 0.0056 21.2 5.6 14 70-83 24-37 (118)
No 1
>2ec1_A Nucleoporin 50 kDa; ranbp domain, nuclear pore-associated protein 60 kDa-like, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=100.00 E-value=6.2e-37 Score=240.25 Aligned_cols=116 Identities=31% Similarity=0.462 Sum_probs=97.6
Q ss_pred ccCCCCceeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-c-cceeeceeeCCCcee
Q 028997 68 KSEERGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-V-GRVLLNALLYPGIKT 145 (200)
Q Consensus 68 ~~GEEdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~-gkVlLN~~L~~~m~~ 145 (200)
.+|||+|++||++|||||++.+ ++|+|||+|+||||+++ ++++|||||+| + |||||||.|+++|++
T Consensus 6 ~tgEE~E~~lf~~raKLf~~~~-----~~WkERGvG~lki~~~k-------~~k~RllmR~d~~~~kv~lN~~i~~~m~~ 73 (125)
T 2ec1_A 6 SGEVKEEDAFYSKKCKLFYKKD-----NEFKEKGIGTLHLKPTA-------NQKTQLLVRADTNLGNILLNVLIPPNMPC 73 (125)
T ss_dssp --CCCCCSCSEEEEEEEEEECS-----SSEEEEEEEEEEEEECS-------SSSEEEEEEESSSSCCBSCCEECCSSCCE
T ss_pred cCCccCceeEEEEeeEEEEecC-----CCcccccEEEEEeeecC-------CCcEEEEEEecCCCCEEEEeeEEcCCCeE
Confidence 4799999999999999998765 48999999999999875 56999999999 5 899999999999999
Q ss_pred ee-cCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHhCC
Q 028997 146 NL-QKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEYAP 198 (200)
Q Consensus 146 ~~-~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~~p 198 (200)
+. +++++ ++|+++.++.|++.+ +++++|+||||++++|++|+++|+++.+
T Consensus 74 ~~~g~~~~-~~~~~~~~~~d~~~~--~~~~~~~lrfk~~e~a~~f~~~~~e~k~ 124 (125)
T 2ec1_A 74 TRTGKNNV-LIVCVPNPPIDEKNA--TMPVTMLIRVKTSEDADELHKILLEKKD 124 (125)
T ss_dssp ECCTTTEE-EEEECCSSCSCSSSS--SSCEEEEEECSSHHHHHHHHHHHHHHHH
T ss_pred EecCCCcE-EEEEccCCcccCCCC--CceEEEEEEECCHHHHHHHHHHHHHhhc
Confidence 98 67777 566766643343211 2689999999999999999999999864
No 2
>1xke_A RAN-binding protein 2; beta barrel, pleckstrin-homology (PH) domain, phosphotyrosine-binding (PTB) domain, protein transport; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=100.00 E-value=1.8e-35 Score=233.01 Aligned_cols=115 Identities=23% Similarity=0.288 Sum_probs=95.1
Q ss_pred cCCCCceeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCceeee
Q 028997 69 SEERGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKTNL 147 (200)
Q Consensus 69 ~GEEdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~~~ 147 (200)
+|||||++||++|||||++.++ .++|+|||+|+||||+++. ++++|||||+| +||||||+.|+++|+++.
T Consensus 2 tGEE~E~~l~~~raKL~~~~~~---~~~WkERG~G~lkil~~k~------~~k~RlvmR~d~~~kv~lN~~i~~~m~~~~ 72 (130)
T 1xke_A 2 SGEEDEKVLYSQRVKLFRFDAE---VSQWKERGLGNLKILKNEV------NGKLRMLMRREQVLKVCANHWITTTMNLKP 72 (130)
T ss_dssp CSSSCEEEEEEEEEEEEEEETT---TTEEEEEEEEEEEEEEETT------SSCEEEEEEETTTTEEEEEEECCTTSCEEE
T ss_pred CCCcceEEEEEEEEEEEEEcCC---CCCcccCcEEEEEEEEcCC------CCeEEEEEEEcCCCeEEEecEeCCCcEEee
Confidence 7999999999999999966432 2589999999999999974 67999999999 999999999999999987
Q ss_pred -cCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHhC
Q 028997 148 -QKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEYA 197 (200)
Q Consensus 148 -~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~~ 197 (200)
.++...++|.+.+..+++ .++++|+|||+++++|++|+++|+++.
T Consensus 73 ~~~s~~~~~~~~~d~~d~~-----~~~~~~~irfks~e~a~~f~~~~ee~k 118 (130)
T 1xke_A 73 LSGSDRAWMWLASDFSDGD-----AKLEQLAAKFKTPELAEEFKQKFEECQ 118 (130)
T ss_dssp CTTCSSCEEEEEEECSSSC-----SEEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEecccCCCC-----CceEEEEEEECCHHHHHHHHHHHHHHH
Confidence 333333455544432222 278999999999999999999998863
No 3
>1rrp_B Nuclear pore complex protein NUP358; complex (small GTPase/nuclear protein), small GTPase, nuclear transport; HET: GNP; 2.96A {Homo sapiens} SCOP: b.55.1.3
Probab=100.00 E-value=1.2e-34 Score=229.16 Aligned_cols=117 Identities=21% Similarity=0.277 Sum_probs=97.5
Q ss_pred cccCCCCceeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCcee
Q 028997 67 KKSEERGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKT 145 (200)
Q Consensus 67 ~~~GEEdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~ 145 (200)
..+|||||++||++|||||++... .++|+|||+|+||||+++. ++++|||||+| +||||||+.|+++|++
T Consensus 14 v~tGEE~E~~lf~~raKL~~~~~~---~~~WkerG~G~lkil~~k~------~~k~RlvmR~d~~~kv~lN~~i~~~m~~ 84 (134)
T 1rrp_B 14 VKTGEEDEEEFFCNRAKLFRFDVE---SKEWKERGIGNVKILRHKT------SGKIRLLMRREQVLKICANHYISPDMKL 84 (134)
T ss_dssp CCCSCCSEEEEEEEEEEEEEECSS---SSCEEEEEEEEEEEEEESS------SCCCEEEEECTTTCCEEECCBCCSSCCC
T ss_pred ecCCCcCeEEEEEEEEEEEEEccc---CCCcccCcEEEEEEEEECC------CCeEEEEEEEcCCCcEEEEeEecCCceE
Confidence 458999999999999999966432 2589999999999999973 67999999999 9999999999999999
Q ss_pred ee-cCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHhC
Q 028997 146 NL-QKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEYA 197 (200)
Q Consensus 146 ~~-~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~~ 197 (200)
+. .++...++|.+.+..++++ ++++|+|||+++++|++|+++|+++.
T Consensus 85 ~~~~~s~~~~~~~~~d~~d~~~-----k~~~~~irfk~~e~A~~f~~~~~e~~ 132 (134)
T 1rrp_B 85 TPNAGSDRSFVWHALDYADELP-----KPEQLAIRFKTPEEAALFKCKFEEAQ 132 (134)
T ss_dssp BCSTTCTTEEEEEEEECTTSSC-----EEEEEEEECSSHHHHHHHHHHHHHTT
T ss_pred eecCCCCeEEEEEcccccCCCC-----ceEEEEEEECCHHHHHHHHHHHHHHh
Confidence 97 3333345666555433332 78999999999999999999999875
No 4
>1k5d_B RAN-specific GTPase-activating protein; ranbp1, rangap, GAP, signal transduction, nuclear transport, GTP hydrolysis, ground state; HET: GNP; 2.70A {Homo sapiens} SCOP: b.55.1.3 PDB: 1k5g_B*
Probab=100.00 E-value=3.2e-34 Score=241.07 Aligned_cols=118 Identities=20% Similarity=0.301 Sum_probs=96.4
Q ss_pred cccCCCCceeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCcee
Q 028997 67 KKSEERGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKT 145 (200)
Q Consensus 67 ~~~GEEdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~ 145 (200)
..+|||||++||++|||||++..+. ..++|+|||+|+||||+|+. ++++|||||+| +|||||||+|+++|++
T Consensus 38 v~TGEEdEe~lf~~RaKLf~f~~d~-~~~~WKERGvG~lkIlk~k~------t~k~RlvMR~d~~~kV~LN~~I~~~m~~ 110 (201)
T 1k5d_B 38 IKTLEEDEEELFKMRAKLFRFASEN-DLPEWKERGTGDVKLLKHKE------KGAIRLLMRRDKTLKICANHYITPMMEL 110 (201)
T ss_dssp CCCSCSSCCCSEEEEEEEEEECCTT-SSCCEEEEEEEEEEEEECSS------SCCEEEEEEETTTCCEEEEEECCSSCCC
T ss_pred ccCCCccceEEEEEeeeEEEecccc-cCCCccccceEEEEEEEcCC------CCcEEEEEEECCcceEEEeeEecCCcee
Confidence 3589999999999999999763211 12589999999999999973 67999999999 9999999999999999
Q ss_pred ee-cCCcEEEEEEc-cCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 146 NL-QKNSIVAIFHT-SGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 146 ~~-~k~~v~~i~~~-~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
+. .++...|+|++ .++.+++ +++++|+|||+++++|++|+++|+++
T Consensus 111 ~~~~~s~ks~v~~~~~d~ad~~-----~k~e~~~iRfks~e~A~~f~~~~ee~ 158 (201)
T 1k5d_B 111 KPNAGSDRAWVWNTHADFADEC-----PKPELLAIRFLNAENAQKFKTKFEEC 158 (201)
T ss_dssp CBCSSCSSEEEEEEEEECTTSS-----CEEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred eecCCCCceEEEEeccccCCCC-----CceEEEEEEECCHHHHHHHHHHHHHH
Confidence 87 33334466655 3332222 27899999999999999999999875
No 5
>4hat_B RAN-specific GTPase-activating protein 1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_B* 4hav_B* 4haw_B* 4hax_B* 4hay_B* 4haz_B* 4hb0_B* 4hb2_B* 4hb3_B* 4hb4_B* 4gmx_B* 4gpt_B*
Probab=100.00 E-value=2.3e-34 Score=229.86 Aligned_cols=115 Identities=25% Similarity=0.366 Sum_probs=92.3
Q ss_pred ccCCCCceeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCceee
Q 028997 68 KSEERGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKTN 146 (200)
Q Consensus 68 ~~GEEdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~~ 146 (200)
.+|||||++||++|||||++..+ .++|+|||+|+||||++++ ++++|||||+| +|||||||.|+++|+++
T Consensus 16 ~tGEE~E~~lf~~raKLf~f~~~---~~~WkerG~G~lkilk~k~------~~k~RllmR~d~~~kv~lN~~i~~~m~~~ 86 (140)
T 4hat_B 16 KTMEEDEEVLYKVRAKLFRFDKD---AKEWKERGTGDCKFLKNKK------TNKVRILMRRDKTLKICANHIIAPEYTLK 86 (140)
T ss_dssp ---CTTEEEEEEEEEEEEEEETT---TTEEEEEEEEEEEEEEETT------TCCEEEEEECTTTCCEEEEEECCTTCCCB
T ss_pred cCCCcCeeEEEEEeEEEEEEcCC---CCCcccccEEEEEEEEcCC------CCeEEEEEEecCcceEEEEeEecCCeEEe
Confidence 57999999999999999966432 1589999999999999974 67999999999 99999999999999999
Q ss_pred e-cCCcEEEEEEc-cCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 147 L-QKNSIVAIFHT-SGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 147 ~-~k~~v~~i~~~-~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
+ .++...|+|++ .|.+++ .+++++|+|||+++++|++|+++|++.
T Consensus 87 ~~~~s~k~~v~~~~~D~sdg-----~~~~~~~~iRfk~~e~A~~f~~~~ee~ 133 (140)
T 4hat_B 87 PNVGSDRSWVYACTADIAEG-----EAEAFTFAIRFGSKENADKFKEEFEKA 133 (140)
T ss_dssp CCTTCSSEEEEEEEEECTTS-----SCEEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred EcCCCCceEEEEccccCCCC-----CCceEEEEEEECCHHHHHHHHHHHHHH
Confidence 7 33222355543 333222 237899999999999999999999875
No 6
>3m1i_B RAN-specific GTPase-activating protein 1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-34 Score=238.24 Aligned_cols=115 Identities=25% Similarity=0.373 Sum_probs=94.4
Q ss_pred ccCCCCceeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCceee
Q 028997 68 KSEERGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKTN 146 (200)
Q Consensus 68 ~~GEEdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~~ 146 (200)
.+|||||++||++|||||++..+ .++|+|||+|+||||+|+. ++++|||||+| +|||||||.|+++|+++
T Consensus 67 ~tGEEdEe~lf~~RaKLf~f~~~---~~~WKERGvG~lkilk~ke------t~k~RllMR~d~~~kV~LN~~I~~~m~~~ 137 (191)
T 3m1i_B 67 KTMEEDEEVLYKVRAKLFRFDAD---AKEWKERGTGDCKFLKNKK------TNKVRILMRRDKTLKICANHIIAPEYTLK 137 (191)
T ss_dssp CCSCTTEEEEEEEEEEEEEEETT---TTEEEEEEEEEEEEEEETT------TCCEEEEEECTTTCCEEEEEECCTTCCCB
T ss_pred cCCCcceeeeeEEeeEEEEEecC---CCCccceeEEEEEEEEcCC------CCeEEEEEEecCcceEEEeeecCCCcEEe
Confidence 57999999999999999966432 2589999999999999974 67999999999 99999999999999999
Q ss_pred ec-CCcEEEEEEc-cCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 147 LQ-KNSIVAIFHT-SGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 147 ~~-k~~v~~i~~~-~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
+. ++...|+|++ .+.+ + | .+++++|+|||+++++|++|+++|++.
T Consensus 138 ~~~~sdks~v~~~~~D~s-d-g---e~k~e~~aIRFk~~E~A~eF~~~~eea 184 (191)
T 3m1i_B 138 PNVGSDRSWVYACTADIA-E-G---EAEAFTFAIRFGSKENADKFKEEFEKA 184 (191)
T ss_dssp CCTTCSSEEEEEEEEECT-T-S---SCEEEEEEEECSSHHHHHHHHHHHHHH
T ss_pred ECCCCCceEEEEecCcCC-C-C---CcceEEEEEEECCHHHHHHHHHHHHHH
Confidence 73 2222345553 3332 1 2 237899999999999999999999875
No 7
>3n7c_A ABR034WP; nuclear pore complex, NUP2, RAN-binding domain, nucleoporin, structural genomics, PSI-2, protein structure initiative; 2.26A {Ashbya gossypii} PDB: 3oan_A
Probab=100.00 E-value=1.5e-33 Score=222.44 Aligned_cols=115 Identities=26% Similarity=0.352 Sum_probs=84.6
Q ss_pred cccCCCCceeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCcee
Q 028997 67 KKSEERGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKT 145 (200)
Q Consensus 67 ~~~GEEdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~ 145 (200)
..+|||||++||++|||||++..+ .++|+|||+|+||||+++. .++++|||||+| +||||||+.|+++|++
T Consensus 3 v~tGEE~E~~lf~~raKL~~f~~~---~~~WkerG~G~lkil~~k~-----~~~k~RllmR~d~~~kv~lN~~i~~~m~~ 74 (130)
T 3n7c_A 3 LTNGEENEEVLFCEKAKLLIFDSD---TKGYTSRGVGELKLLRKKD-----DKGKVRVLCRSEGMGHVLLNTSVVKSFKY 74 (130)
T ss_dssp -------CEEEEEEEEEEEEECC------CEEEEEEEEEEEEEETT-----EEEEEEEEEEC-CCCCEEEEEECCTTBCC
T ss_pred ccCCCcCeeEEEEEEEEEEEEeCC---CCCchhcceEEEEEEEecC-----CCCEEEEEEEecCCceEEeeccccCCcEE
Confidence 468999999999999999966432 2589999999999999872 257999999999 9999999999999999
Q ss_pred eec-CCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHhC
Q 028997 146 NLQ-KNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEYA 197 (200)
Q Consensus 146 ~~~-k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~~ 197 (200)
+.. +++..+++... . +++ ++++|+|||+++++|++|+++|+++.
T Consensus 75 ~~~~~~~~~~v~~~~-~--~dg-----k~~~~~lrfks~e~A~~f~~~iee~~ 119 (130)
T 3n7c_A 75 QPIDADNENLIKWPI-I--TDG-----KLETFIIKVKQKADGRRLVGAVADAQ 119 (130)
T ss_dssp EESCTTCTTEEEEEE-E--ETT-----EEEEEEEECSSHHHHHHHHHHHHHHH
T ss_pred eEcCCCCccEEEEEe-c--CCC-----ceEEEEEEECCHHHHHHHHHHHHHHH
Confidence 973 22111232221 1 112 68999999999999999999999864
No 8
>2y8g_A Ranbp3-B, RAN-binding protein 3; protein transport, CRM1-mediated nuclear export; 1.61A {Homo sapiens} PDB: 2y8f_A
Probab=99.97 E-value=7.8e-32 Score=214.46 Aligned_cols=115 Identities=18% Similarity=0.328 Sum_probs=84.4
Q ss_pred cccCCCCceeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCcee
Q 028997 67 KKSEERGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKT 145 (200)
Q Consensus 67 ~~~GEEdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~ 145 (200)
..+|||+|++||++|||||.+... .++|+|||+|+||||+++..+ +.++++|||||+| ++||||||.|+++|++
T Consensus 7 v~tGEE~E~~~~~~raKL~~f~~~---~~~WkERG~G~lkil~~k~~~--~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~ 81 (138)
T 2y8g_A 7 VITGEEAESNVLQMQCKLFVFDKT---SQSWVAVGRGLLRLNDMASTD--DGTLQSRLVMRTQGSLRLILNTKLWAQMQI 81 (138)
T ss_dssp -------CEEEEEEEEEEEEEETT---TTEEEEEEEEEEEEEEEECTT--TCCEEEEEEEEETTTCCEEEEEECCTTCCE
T ss_pred ccCCCcCcEEEEEEEeEEEEEecC---CCCchhceEEEEEEEEeccCC--CCCccEEEEEEEcCcceEEEeeEecCCcee
Confidence 458999999999999999965432 258999999999999997311 2247999999999 9999999999999999
Q ss_pred ee-cCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHH
Q 028997 146 NL-QKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQE 195 (200)
Q Consensus 146 ~~-~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e 195 (200)
+. +++++ +|.+.++ .+ + .+.+|+|||+++++|+.|...+++
T Consensus 82 ~~~~~k~~--~~~~~d~-~d-~-----~~~~~lirfk~~e~a~lf~~~~~~ 123 (138)
T 2y8g_A 82 DKASEKSI--RITAMDT-ED-Q-----GVKVFLISASSKDTGQLYAALHHR 123 (138)
T ss_dssp EEEETTEE--EEECCC---C-C-----CCCEEEEECCHHHHHHHHHHHHHH
T ss_pred ecCCCCEE--EEEEecC-CC-C-----ceEEEEEEECCHHHHHHHHHHHHH
Confidence 98 45655 4444453 12 1 467999999999999776655544
No 9
>2crf_A RAN binding protein 3; RAN_BP1 domain, ranbp3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.55.1.3
Probab=99.97 E-value=1.9e-31 Score=214.91 Aligned_cols=114 Identities=19% Similarity=0.367 Sum_probs=89.6
Q ss_pred ccCCCCceeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCceee
Q 028997 68 KSEERGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKTN 146 (200)
Q Consensus 68 ~~GEEdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~~ 146 (200)
.+|||+|++||++|||||++... .++|+|||+|+||||+++..+ +.++++|||||+| ++|||||+.|+++|+++
T Consensus 20 ~tGEE~E~~l~~~raKL~~fd~~---~~~WkERG~G~lkil~~k~~~--~~t~k~RlvmR~d~~~kv~lN~~i~~~m~~~ 94 (150)
T 2crf_A 20 ITGEEAESNVLQMQCKLFVFDKT---SQSWVERGRGLLRLNDMASTD--DGTLQSRLVMRTQGSLRLILNTKLWAQMQID 94 (150)
T ss_dssp SCCCCCCEEEEEEEEEEEEEETT---TTEEEEEEEEEEEEEEEECSS--SCSEEEEEEEEESSSCCEEEEEECCTTCCEE
T ss_pred cCCCcCeEEEEEEEeEEEEEcCC---CCCcccceeEEEEEEeccccC--CCCccEEEEEEEcCcceEEeeeeccCCceee
Confidence 57999999999999999966432 258999999999999987311 2246999999999 99999999999999999
Q ss_pred e-cCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHH
Q 028997 147 L-QKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQE 195 (200)
Q Consensus 147 ~-~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e 195 (200)
. .++.++|. +.++. + + .+.+|+|||+++++|+.|...+++
T Consensus 95 ~~~~k~~~~~--~~d~~-d-~-----~~~~~lirfk~~e~a~lf~~~~e~ 135 (150)
T 2crf_A 95 KASEKSIHIT--AMDTE-D-Q-----GVKVFLISASSKDTGQLYAALHHR 135 (150)
T ss_dssp CCSSSEEEEE--EEBSS-S-C-----CEEEEEEECCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEE--eecCC-C-C-----ceEEEEEEECCHHHHHHHHHHHHH
Confidence 7 45555443 33431 2 1 468999999999999766654443
No 10
>1qc6_A EVH1 domain from ENA/VAsp-like protein; AN incomplete seven stranded anti-parallel beta barrel closed by AN alpha helix, EVH1 domain; 2.60A {Mus musculus} SCOP: b.55.1.4
Probab=99.48 E-value=4.2e-13 Score=105.18 Aligned_cols=102 Identities=12% Similarity=0.184 Sum_probs=80.7
Q ss_pred CceeEEEEceeEEEecCCCCCCCCCccccee-----eEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCceee
Q 028997 73 GIIVVHEVKCKLYVKSSDPADKDTWKDRGTG-----QLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKTN 146 (200)
Q Consensus 73 dE~~vf~~RaKLf~~~~~~~~~~~WkERGvG-----~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~~ 146 (200)
.|++|+++||+||...++ .+.|..+|.| .++|+.+.. +...|||+|+. .++||+|+.|+++|.|+
T Consensus 2 ~E~~i~~~~A~V~~~d~~---~~~W~~~g~G~~~l~~V~i~~~~~------~~~~Riv~~~~~~~~vi~n~~i~~~~~y~ 72 (130)
T 1qc6_A 2 SEQSICQARASVMVYDDT---SKKWVPIKPGQQGFSRINIYHNTA------SSTFRVVGVKLQDQQVVINYSIVKGLKYN 72 (130)
T ss_dssp CCEEEEEEEEEEEEEETT---TTEEEECC-----CEEEEEEEETT------TTEEEEEEECTTTCCEEEEEECCTTCEEE
T ss_pred CceeEEEEEEEEEEECCC---CCceeECCCCceeeeEEEEEecCC------CcEEEEEEEeCCCCeEEEeeEEeCCcEEe
Confidence 378999999999955433 2579999998 788888862 56899999997 99999999999999999
Q ss_pred ecCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHhC
Q 028997 147 LQKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEYA 197 (200)
Q Consensus 147 ~~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~~ 197 (200)
...... ..|. ++ -..|-|.|.++++|++|+++|++.+
T Consensus 73 ~~~~~F-h~w~--~~-----------~~~~GL~F~se~eA~~F~~~~~~al 109 (130)
T 1qc6_A 73 QATPTF-HQWR--DA-----------RQVYGLNFASKEEATTFSNAMLFAL 109 (130)
T ss_dssp EEETTE-EEEE--CS-----------SCEEEEEESCHHHHHHHHHHHHHHH
T ss_pred ccCCee-EEEE--cC-----------CEEEEEecCCHHHHHHHHHHHHHHH
Confidence 855544 2232 21 2699999999999999999998753
No 11
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=99.02 E-value=6.4e-09 Score=80.63 Aligned_cols=103 Identities=14% Similarity=0.261 Sum_probs=78.2
Q ss_pred CceeEEEEceeEEEecCCCCCCCCCcccceeeEE--eeeecCCCCCCCCCceEEEEEccccceeeceeeCCCceeeecCC
Q 028997 73 GIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLS--IKCKEGISKGTKESKPTILVRNDVGRVLLNALLYPGIKTNLQKN 150 (200)
Q Consensus 73 dE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lk--il~~k~~~~~t~~~k~RlvmR~D~gkVlLN~~L~~~m~~~~~k~ 150 (200)
.|.+|++.||.||...+. .++.|..+|.|.++ |.++. + .+.+||+.|. .++|++|..|+++|.|+....
T Consensus 2 ~E~~i~~~rA~V~~~D~~--tk~~W~p~g~~~~~V~~~~d~-----~-~~~yRIv~~~-~~~vv~n~~i~~~l~y~~a~p 72 (120)
T 1ddw_A 2 GEQPIFSTRAHVFQIDPN--TKKNWVPTSKHAVTVSYFYDS-----T-RNVYRIISLD-GSKAIINSTITPNMTFTKTSQ 72 (120)
T ss_dssp CEEEEEEEEEEEEEECTT--TSCSEEESCSSCEEEEEEEET-----T-TTEEEEEEEE-TTEEEEEEECCTTCCCEECSS
T ss_pred CceEEEEEEEEEEEEcCC--CCCceEeCCCCceEEEEEEcC-----C-CCEEEEEEcc-CCEEEEeCEecCCcEEeeCCc
Confidence 478999999999955332 22499996666555 66664 2 4569999987 578999999999999998655
Q ss_pred cEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 151 SIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 151 ~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
.. .-|...+ ....|-|.|.++++|.+|...|++.
T Consensus 73 ~F-hqW~d~~-----------~~~~~GLnF~s~~eA~~F~~~~~~~ 106 (120)
T 1ddw_A 73 KF-GQWADSR-----------ANTVYGLGFSSEHHLSKFAEKFQEF 106 (120)
T ss_dssp SE-EEEEETT-----------TTEEEEEECSSHHHHHHHHHHHHHH
T ss_pred cc-cEEEcCC-----------CcEEEEeccCCHHHHHHHHHHHHHH
Confidence 44 2233211 2489999999999999999999875
No 12
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=99.01 E-value=3.8e-09 Score=86.37 Aligned_cols=103 Identities=14% Similarity=0.261 Sum_probs=78.0
Q ss_pred CceeEEEEceeEEEecCCCCCCCCCcccceeeEE--eeeecCCCCCCCCCceEEEEEccccceeeceeeCCCceeeecCC
Q 028997 73 GIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQLS--IKCKEGISKGTKESKPTILVRNDVGRVLLNALLYPGIKTNLQKN 150 (200)
Q Consensus 73 dE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lk--il~~k~~~~~t~~~k~RlvmR~D~gkVlLN~~L~~~m~~~~~k~ 150 (200)
.|.+||+.||.||...+. .++.|...|.|.++ |.++. + .+.+||+.|. .++|++|..|+++|+|+....
T Consensus 7 ~E~~I~s~rA~Vm~~D~~--tk~~WvP~g~~~~~V~i~~d~-----~-rnsyRIvg~~-d~kvvinc~I~~~l~Y~kasp 77 (168)
T 1i2h_A 7 GEQPIFSTRAHVFQIDPN--TKKNWVPTSKHAVTVSYFYDS-----T-RNVYRIISLD-GSKAIINSTITPNMTFTKTSQ 77 (168)
T ss_dssp SSCCSEEEEEEEEEECTT--SSCCSEESCSSCEEEEEEEET-----T-TTEEEEEEEE-TTEEEEEEECCTTCCEEEEET
T ss_pred cceeEEEEEEEEEEECCC--CCCceeecCCCCeEEEEEEcC-----C-CCEEEEEEcc-CCEEEEecEecCCcEEeeCCc
Confidence 577899999999965332 23489996666665 66654 2 4569999988 578999999999999988554
Q ss_pred cEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 151 SIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 151 ~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
.. .-|...+ ....|-|.|.++++|.+|.+.|++.
T Consensus 78 ~F-HqW~d~~-----------~~~v~GLnF~Se~eA~~F~~~~~~a 111 (168)
T 1i2h_A 78 KF-GQWADSR-----------ANTVYGLGFSSEHHLSKFAEKFQEF 111 (168)
T ss_dssp TE-EEEEETT-----------TTEEEEEEESSHHHHHHHHHHHHHH
T ss_pred cc-ceeecCC-----------CcEEEEeccCCHHHHHHHHHHHHHH
Confidence 44 2233211 2489999999999999999999875
No 13
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=98.64 E-value=5.2e-07 Score=68.89 Aligned_cols=101 Identities=17% Similarity=0.261 Sum_probs=77.9
Q ss_pred CceeEEEEceeEEEecCCCCCCCCCcccc--eee--EEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCceeee
Q 028997 73 GIIVVHEVKCKLYVKSSDPADKDTWKDRG--TGQ--LSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKTNL 147 (200)
Q Consensus 73 dE~~vf~~RaKLf~~~~~~~~~~~WkERG--vG~--Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~~~ 147 (200)
.|.+|+++||.+|...+. .+.|.-.| -|. +.|.++. + .+.+||+.|.- .++|++|..|+++|.|+.
T Consensus 2 ~e~~i~~~~A~V~~~d~~---~~~W~p~~~~~g~s~V~~~~d~-----~-~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~ 72 (112)
T 1evh_A 2 SEQSICQARAAVMVYDDA---NKKWVPAGGSTGFSRVHIYHHT-----G-NNTFRVVGRKIQDHQVVINCAIPKGLKYNQ 72 (112)
T ss_dssp CEEEEEEEEEEEEEEETT---TTEEEEGGGCCSCEEEEEEEET-----T-TTEEEEEEEETTTCCEEEEEEECTTCCCBC
T ss_pred CceeEEEEEEEEEEEcCC---CCceEECCCCCCceEEEEEEEC-----C-CCEEEEEEEECCCCcEEEeeEecCCceEEe
Confidence 378899999999954332 24899988 344 7887764 2 45799999985 889999999999999987
Q ss_pred cCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 148 QKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 148 ~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
.....- -|. ++ . ..|=|-|.++++|.+|.+.|++.
T Consensus 73 ~~p~Fh-~w~--~~----------~-~~~GLnF~se~eA~~F~~~v~~a 107 (112)
T 1evh_A 73 ATQTFH-QWR--DA----------R-QVYGLNFGSKEDANVFASAMMHA 107 (112)
T ss_dssp CSSSEE-EEE--CS----------S-CEEEEEESSHHHHHHHHHHHHHH
T ss_pred cCccce-eEe--cC----------C-EEEEEecCCHHHHHHHHHHHHHH
Confidence 555431 122 21 1 69999999999999999999875
No 14
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=98.60 E-value=6.4e-07 Score=68.72 Aligned_cols=101 Identities=15% Similarity=0.253 Sum_probs=78.2
Q ss_pred ceeEEEEceeEEEecCCCCCCCCCcccce---e--eEEeeeecCCCCCCCCCceEEEEEcc--ccceeeceeeCCCceee
Q 028997 74 IIVVHEVKCKLYVKSSDPADKDTWKDRGT---G--QLSIKCKEGISKGTKESKPTILVRND--VGRVLLNALLYPGIKTN 146 (200)
Q Consensus 74 E~~vf~~RaKLf~~~~~~~~~~~WkERGv---G--~Lkil~~k~~~~~t~~~k~RlvmR~D--~gkVlLN~~L~~~m~~~ 146 (200)
|.+|+++||.+|...+. .+.|.-.|. | .+.|.++. + .+.+||+.|.- .++|++|..|+++|.|+
T Consensus 3 e~~i~~~~A~V~~~d~~---~~~W~p~~~g~~gvs~V~~~~d~-----~-~~~yrI~~~~l~~~~~vv~~~~l~~~l~y~ 73 (115)
T 1egx_A 3 ETVICSSRATVMLYDDG---NKRWLPAGTGPQAFSRVQIYHNP-----T-ANSFRVVGRKMQPDQQVVINCAIVRGVKYN 73 (115)
T ss_dssp SCEEEEEEEECBEECTT---TSSCCBSSCSCCCCEEEEEEEET-----T-TTEEEEEEEESSTTCCEEEEEEECSSCCCC
T ss_pred ceeEEEEEEEEEEEcCC---CCceeECCCCCCCccEEEEEEeC-----C-CCEEEEEEEEcCCCCEEEEeeEEcCCceEE
Confidence 67899999999965332 246999887 4 48888875 2 45799998884 67899999999999998
Q ss_pred ecCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHhC
Q 028997 147 LQKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEYA 197 (200)
Q Consensus 147 ~~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~~ 197 (200)
......- -|. ++ . ..|=|-|.++++|.+|.++|++.+
T Consensus 74 ~~~p~FH-~w~--~~----------~-~~~GLnF~se~eA~~F~~~v~~al 110 (115)
T 1egx_A 74 QATPNFH-QWR--DA----------R-QVWGLNFGSKEDAAQFAAGMASAL 110 (115)
T ss_dssp CSSTTEE-EEE--SS----------S-CEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ecCccce-EEe--cC----------C-EEEEEecCCHHHHHHHHHHHHHHH
Confidence 7655441 122 21 1 699999999999999999998753
No 15
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=98.48 E-value=1.4e-06 Score=67.13 Aligned_cols=107 Identities=12% Similarity=0.148 Sum_probs=72.7
Q ss_pred CceeEEEEceeEEEecCCCCCCCCCcccceeeE---EeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCceeeec
Q 028997 73 GIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQL---SIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKTNLQ 148 (200)
Q Consensus 73 dE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~L---kil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~~~~ 148 (200)
+|..|+++||.+|...+. .+.|.-.|-|-| .|...+.+.+.+ ...+||+.|.- .++|++|..|+++|.|+..
T Consensus 2 ~~~~i~~~~A~V~~~d~~---~~~W~p~~~g~ls~v~i~~~~~~~d~~-~~~yrIv~~~l~~~~vv~~~~l~~~~~y~~~ 77 (118)
T 1xod_A 2 SDDSYARVRAVVMTRDDS---SGGWLQLGGGGLSSVTVSKTLQPGDSG-GTEFLVHGERLRDKTVVLECVLRRDLVYNKV 77 (118)
T ss_dssp ---CCEEEEEEEEEECSS---SSCEEEGGGCCCEEEEEECC----------CCEEEEEETTTCCEEEEEECCTTCEEEEE
T ss_pred CCccEEEEEEEEeeEcCC---CCCEeeCCCCCcccEEEEEecCcCCCC-CCEEEEEEEECCCCeEEEEEEEeCCcEEEec
Confidence 356799999999954332 258999887764 444432111112 45699999986 8899999999999999874
Q ss_pred CCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHhC
Q 028997 149 KNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEYA 197 (200)
Q Consensus 149 k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~~ 197 (200)
....- -|.. + -..|=|-|.++++|.+|.++|++.+
T Consensus 78 ~p~Fh-~w~~-~------------~~~~GL~F~se~eA~~F~~~v~~al 112 (118)
T 1xod_A 78 TPTFH-HWRI-G------------DKKFGLTFQSPADARAFDRGIRRAI 112 (118)
T ss_dssp ETTEE-EEEE-T------------TEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCcce-EEEe-C------------CEEEEEecCCHHHHHHHHHHHHHHH
Confidence 44331 1221 1 1579999999999999999998753
No 16
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.47 E-value=4e-06 Score=65.37 Aligned_cols=108 Identities=11% Similarity=0.102 Sum_probs=78.0
Q ss_pred CCceeEEEEceeEEEecCCCCCCCCCcccceeeE---EeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCceeee
Q 028997 72 RGIIVVHEVKCKLYVKSSDPADKDTWKDRGTGQL---SIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKTNL 147 (200)
Q Consensus 72 EdE~~vf~~RaKLf~~~~~~~~~~~WkERGvG~L---kil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~~~ 147 (200)
..|.+|+++||-+|...+. .+.|.-.|-|-| .|...+.+.+.+ ...+||+.+.- -++|++|..|+++|+|+.
T Consensus 10 ~~~~~i~~~~A~Vm~~D~~---~~~W~p~~~g~ls~v~v~~~~~~~d~~-~~~yrI~~~~l~d~~vv~~~~l~~~l~Y~~ 85 (126)
T 2jp2_A 10 DDDSYIVRVKAVVMTRDDS---SGGWFPQEGGGISRVGVCKVMHPEGNG-RSGFLIHGERQKDKLVVLECYVRKDLVYTK 85 (126)
T ss_dssp SCCSEEEEEEEEEEEECTT---SSSSEECSCCSCEEEEEECCBCTTCSS-CBCEEEEEEESSSSCEEEEEEESSCCCEEE
T ss_pred CCcceEEEEEEEEeeEcCC---CCCEeeCCCCCcccEEEEEecCCCCCC-CCEEEEEEEEcCCCeEEEEEEEeCCceEEe
Confidence 4678899999999954332 258999888763 344333111122 45799999986 899999999999999987
Q ss_pred cCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHhC
Q 028997 148 QKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEYA 197 (200)
Q Consensus 148 ~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~~ 197 (200)
.....- -|. +. . ..|-|-|.++++|.+|.++|++..
T Consensus 86 ~~p~FH-~w~--~~----------~-~~~GLnF~se~eA~~F~~~v~~al 121 (126)
T 2jp2_A 86 ANPTFH-HWK--VD----------N-RKFGLTFQSPADARAFDRGVRKAI 121 (126)
T ss_dssp EETTEE-EEE--CS----------S-SEEEEEESSHHHHHHHHHHHHHHH
T ss_pred cCCcce-EEE--cC----------C-EEEEEecCCHHHHHHHHHHHHHHH
Confidence 544331 122 21 1 469999999999999999998753
No 17
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=97.62 E-value=0.0012 Score=51.79 Aligned_cols=103 Identities=11% Similarity=0.114 Sum_probs=69.9
Q ss_pred eEEEEceeEEEecCCCCCCCCCccccee---eEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceeeCCCceeeecCCc
Q 028997 76 VVHEVKCKLYVKSSDPADKDTWKDRGTG---QLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALLYPGIKTNLQKNS 151 (200)
Q Consensus 76 ~vf~~RaKLf~~~~~~~~~~~WkERGvG---~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L~~~m~~~~~k~~ 151 (200)
..|.+||-+|...+. ++.|---|-| .+-|.++......+ ...+||+=|+- -.+|+||..|.++|+|+.....
T Consensus 12 ~~~~~rA~Vm~~Dd~---tk~WlP~gg~glS~v~iy~~~~~~~~~-~~~yRIvg~r~~d~~vvinc~I~~~l~Ynkatp~ 87 (130)
T 3syx_A 12 SYARVRAVVMTRDDS---SGGWLPLGGSGLSSVTVFKVPHQEENG-CADFFIRGERLRDKMVVLECMLKKDLIYNKVTPT 87 (130)
T ss_dssp EEEEEEEEEEEECSS---SSCEEESSSSCCEEEEEEEEESSSTTS-SEEEEEEEEETTTCCEEEEEECCTTCEEEEEETT
T ss_pred eeeEEEEEeeeEcCC---CCceEeCCCCCCceEEEEeccCCCCCC-CcEEEEEEEecCCCeEEEeeeecCCceEEecccc
Confidence 478999999954432 2579987533 44455542111111 24689998865 5679999999999999875554
Q ss_pred EEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 152 IVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 152 v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
.-- |... . ..|=|-|.++++|.+|.+.|..+
T Consensus 88 FHq-Wrd~------------~-~~yGL~F~S~~dA~~F~~~~~~A 118 (130)
T 3syx_A 88 FHH-WKID------------D-KKFGLTFQSPADARAFDRGIRRA 118 (130)
T ss_dssp EEE-EEET------------T-EEEEEEESSHHHHHHHHHHHHHH
T ss_pred ccc-cccc------------C-eEeecccCCHHHHHHHHHHHHHH
Confidence 421 2221 1 46999999999999998877654
No 18
>1mke_A WIP - N-WAsp, fusion protein consisting of wiskott-aldrich syndrome protein interacting protein...; polyproline, protein-protein complex; NMR {Rattus norvegicus} SCOP: b.55.1.4
Probab=96.98 E-value=0.0094 Score=47.69 Aligned_cols=99 Identities=14% Similarity=0.238 Sum_probs=73.1
Q ss_pred eeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEccccceeeceeeCCCceeeecCCcEEE
Q 028997 75 IVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRNDVGRVLLNALLYPGIKTNLQKNSIVA 154 (200)
Q Consensus 75 ~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D~gkVlLN~~L~~~m~~~~~k~~v~~ 154 (200)
.+|...=|.||+-..+ +.|.-.+.|.|-+.++.. ..+--.||+-.. .++|+.+..|+.+|+|+......
T Consensus 41 ~~lataVaqLy~a~~~----~~W~~~~~Gal~~VkD~~----~rsyf~RlvDl~-~~~viweqELY~~f~Y~~~r~~F-- 109 (152)
T 1mke_A 41 VTMSSAVVQLYAADRN----CMWSKKCSGVACLVKDNP----QRSYFLRIFDIK-DGKLLWEQELYNNFVYNSPRGYF-- 109 (152)
T ss_dssp EEEEEEEEEEEEEETT----TEEEEEEEEEEEEEEETT----TTEEEEEEECSS-SCSEEEEEECCSSCCCBCSSSSE--
T ss_pred cEEEEeeEEEEEECCC----CceEecCceEEEEEEECC----CCeEEEEEEEcc-CCeEEEEeecccceeeccCCCeE--
Confidence 5788888999965332 489999999999988651 111123777665 57899999999999998755533
Q ss_pred EEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 155 IFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 155 i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
..+..+ -.++-|.|-+.++|.+|++++.+.
T Consensus 110 HtFe~d------------~c~~GLnFade~EA~~F~~~V~~~ 139 (152)
T 1mke_A 110 HTFAGD------------TCQVALNFANEEEAKKFRKAVTDL 139 (152)
T ss_dssp EEEECS------------SSEEEEEESSHHHHHHHHHHHHHH
T ss_pred EEEecC------------CcEEEEeeCCHHHHHHHHHHHHHH
Confidence 222111 158999999999999999999765
No 19
>2ifs_A N-WAsp, wiskott-aldrich syndrome protien ineracting protein and neural wiskott-aldrich syndrome...; verprolin, polyproline, protein- protein complex; NMR {Homo sapiens}
Probab=96.97 E-value=0.0094 Score=48.44 Aligned_cols=99 Identities=14% Similarity=0.238 Sum_probs=73.3
Q ss_pred eeEEEEceeEEEecCCCCCCCCCcccceeeEEeeeecCCCCCCCCCceEEEEEccccceeeceeeCCCceeeecCCcEEE
Q 028997 75 IVVHEVKCKLYVKSSDPADKDTWKDRGTGQLSIKCKEGISKGTKESKPTILVRNDVGRVLLNALLYPGIKTNLQKNSIVA 154 (200)
Q Consensus 75 ~~vf~~RaKLf~~~~~~~~~~~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D~gkVlLN~~L~~~m~~~~~k~~v~~ 154 (200)
.+|...=|.||+-..+ +.|.-.+.|.|-+.++.. ..+--.||+-.. .++|+.|..|+.+|+|+......
T Consensus 58 ~~lataVaqLy~a~~~----~~W~~~~~Gal~~vkD~~----~rsyf~RlvDl~-~~~vvweqELY~~f~Y~~~r~~F-- 126 (169)
T 2ifs_A 58 VTMSSAVVQLYAADRN----CMWSKKCSGVACLVKDNP----QRSYFLRIFDIK-DGKLLWEQELYNNFVYNSPRGYF-- 126 (169)
T ss_dssp EEEEEEEEEEEEEETT----TEEEEEEEEEEEEEEETT----TTEEEEEEEETT-TCCCCEEEECCSSCCCBCCCSSE--
T ss_pred eEEEEEEEEEEEECCC----CeeEecCceEEEEEEECC----CCeEEEEEEEcc-CCeEEEEeecccceeeccCCCeE--
Confidence 3688888999965332 489999999999888641 111123888776 57899999999999998755533
Q ss_pred EEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 155 IFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 155 i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
..+..+ -.++-|.|.+.++|.+|+++|.+.
T Consensus 127 HtFe~d------------~c~~GLnFade~EA~~F~~~V~~~ 156 (169)
T 2ifs_A 127 HTFAGD------------TCQVALNFANEEEAKKFRKAVTDL 156 (169)
T ss_dssp EEEECS------------SSEEEEECSCHHHHHHHHHHHHHH
T ss_pred EEeecC------------CcEEEEeeCCHHHHHHHHHHHHHH
Confidence 222111 158999999999999999999765
No 20
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=89.13 E-value=5.3 Score=30.82 Aligned_cols=92 Identities=12% Similarity=0.242 Sum_probs=63.5
Q ss_pred EceeEEEecCCCCCCCCCcccce-eeEEeeeecCCCCCCCCCceEEEEEcc--ccceeeceeeCCCceeeecCCcEEEEE
Q 028997 80 VKCKLYVKSSDPADKDTWKDRGT-GQLSIKCKEGISKGTKESKPTILVRND--VGRVLLNALLYPGIKTNLQKNSIVAIF 156 (200)
Q Consensus 80 ~RaKLf~~~~~~~~~~~WkERGv-G~Lkil~~k~~~~~t~~~k~RlvmR~D--~gkVlLN~~L~~~m~~~~~k~~v~~i~ 156 (200)
.-|-||.+.++ ..+|.-.|+ |+|-|-+.. + .-++.|++=+- +..++. .|.+++.+....+-+ ++
T Consensus 36 ~~v~vY~f~~~---~~~W~K~~iEG~LFv~~R~-----~-~P~~~~ivLNR~~~~n~~~--~l~~~~~~e~~~~~l--i~ 102 (134)
T 2lyd_A 36 SHVAFYTFNSS---QNEWEKTDVEGAFFIYHRN-----A-EPFHSIFINNRLNTTSFVE--PITGSLELQSQPPFL--LY 102 (134)
T ss_dssp EEEEEEEEETT---TTEEEEEEEEEEEEEEECS-----S-SSSEEEEEEETTTTEEEEE--ECCSSCEEEEETTEE--EE
T ss_pred CeEEEEEecCC---cCceeEcCCcceEEEEEcc-----C-CCceEEEEEcCCCCcceeE--EcCCCcEEEeeCCEE--EE
Confidence 34778966543 258988888 788887754 2 23566555444 555554 578999999888855 22
Q ss_pred EccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 157 HTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 157 ~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
-.. .-..|-|.|=+.++++.+.+.|++.
T Consensus 103 r~~------------~~~I~GiWf~~~~d~~~i~~~l~~l 130 (134)
T 2lyd_A 103 RNE------------RSRIRGFWFYNSEECDRISGLVNGL 130 (134)
T ss_dssp EEG------------GGEEEEEEESSHHHHHHHHHHHHHH
T ss_pred ECC------------CCcEEEEEecChHHHHHHHHHHHHH
Confidence 221 2368999999999999999988764
No 21
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=80.76 E-value=17 Score=27.74 Aligned_cols=92 Identities=10% Similarity=0.171 Sum_probs=60.5
Q ss_pred EceeEEEecCCCCCCCCCcccce-eeEEeeeecCCCCCCCCCceEEEEEcc--ccceeeceeeCCCceeeecCCcEEEEE
Q 028997 80 VKCKLYVKSSDPADKDTWKDRGT-GQLSIKCKEGISKGTKESKPTILVRND--VGRVLLNALLYPGIKTNLQKNSIVAIF 156 (200)
Q Consensus 80 ~RaKLf~~~~~~~~~~~WkERGv-G~Lkil~~k~~~~~t~~~k~RlvmR~D--~gkVlLN~~L~~~m~~~~~k~~v~~i~ 156 (200)
.-|-||.+..+ +++|.-.|| |+|-|-+.. .-+.++++=+- ..+.+ ..|.+++.++.+.+-+ ++
T Consensus 31 ~~v~vY~f~~~---~~~W~K~~iEGtLFv~~R~-------~P~~~~iVlNR~~~~n~~--~~i~~~~~~e~~~~~l--~~ 96 (127)
T 2qkl_A 31 SHVAVYQFDVG---SQKWLKTSIEGTFFLVKDQ-------RARVGYVILNRNSPENLY--LFINHPSNVHLVDRYL--IH 96 (127)
T ss_dssp EEEEEECC---------CCEEEEEEEEEEEEET-------TCCEEEEEEESSSSCCEE--EEECSGGGEEEETTEE--EE
T ss_pred CeEEEEEecCC---CCceEEcCcEEEEEEEEcc-------CCceEEEEEcCCCCcCee--EecCCCceEEEeCCEE--EE
Confidence 44778855432 258999998 778777753 12455444333 55544 4688899999988855 23
Q ss_pred EccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHhC
Q 028997 157 HTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEYA 197 (200)
Q Consensus 157 ~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~~ 197 (200)
-..+ ...|-|.|-+.++++.+.+.|++.+
T Consensus 97 r~~~------------~~i~GiWf~~~~d~~~i~~~l~~ll 125 (127)
T 2qkl_A 97 RTEN------------QHVVGLWMFDPNDMSRIFNIVKESL 125 (127)
T ss_dssp EETT------------TEEEEEEESSTHHHHHHHHHHHHHT
T ss_pred EcCC------------CcEEEEEEEchHHHHHHHHHHHHHH
Confidence 3222 3799999999999999999998754
No 22
>2oqb_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase, transcriptional regulati activation domain; 1.69A {Rattus norvegicus}
Probab=77.53 E-value=21 Score=27.10 Aligned_cols=51 Identities=14% Similarity=0.196 Sum_probs=37.7
Q ss_pred cceeeceeeCCCceeee-cCCcEEEEEEccCCCCCCCCCCCCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 131 GRVLLNALLYPGIKTNL-QKNSIVAIFHTSGDDAGGGNNGSAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 131 gkVlLN~~L~~~m~~~~-~k~~v~~i~~~~~~~~~e~~~~~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
+..+.=..|.++-.|.. ++.+.. + . .+ -.+.||||++.+++..|+..|+..
T Consensus 54 ~~~l~ef~V~~~TEc~rVGk~S~l-i-t-lg------------~~slLl~Fas~~d~~~F~~~l~k~ 105 (117)
T 2oqb_A 54 DVCVFKCSVSRETECSRVGRQSFI-I-T-LG------------CNSVLIQFATPHDFCSFYNILKTC 105 (117)
T ss_dssp CCEEEEEEEETTSEEEEETTTEEE-E-E-ET------------TEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CeEEEEEEecCCccceeecCeEEE-E-E-EC------------CcEEEEEeCCHHHHHHHHHHHHHH
Confidence 45555567777888765 887762 2 2 22 269999999999999999999764
No 23
>1y5o_A TFB1, RNA polymerase II transcription factor B 73 kDa subunit; TFIIH, PH domain, phosphoinositides, VP16; NMR {Saccharomyces cerevisiae} SCOP: b.55.1.9 PDB: 2gs0_A 2k2u_A 2l2i_A 2lox_A*
Probab=36.41 E-value=1.4e+02 Score=22.52 Aligned_cols=27 Identities=4% Similarity=0.134 Sum_probs=23.3
Q ss_pred CCcceEEEEEcCCHHHHHHHHHHHHHh
Q 028997 170 SAAARTFLIRTKTEEDRNKLATAIQEY 196 (200)
Q Consensus 170 ~~~~~~~liR~kt~e~A~eL~~~i~e~ 196 (200)
.+++.+|++-|-+-.+++.+++.|+.-
T Consensus 81 ~~~p~~~~F~FtnR~~~d~IKd~Lq~i 107 (115)
T 1y5o_A 81 VPKPQRHMFSFNNRTVMDNIKMTLQQI 107 (115)
T ss_dssp SCCCEEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEeCCHHHHHHHHHHHHHH
Confidence 347899999999999999999988764
No 24
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=32.17 E-value=1.5e+02 Score=21.88 Aligned_cols=78 Identities=18% Similarity=0.202 Sum_probs=43.1
Q ss_pred CCcccceeeEEeeeecCCCCCCCCCceEEEEEcc-ccceeeceee--CCCceeee-cCCcEEEEEEccCCCCCCCCCCCC
Q 028997 96 TWKDRGTGQLSIKCKEGISKGTKESKPTILVRND-VGRVLLNALL--YPGIKTNL-QKNSIVAIFHTSGDDAGGGNNGSA 171 (200)
Q Consensus 96 ~WkERGvG~Lkil~~k~~~~~t~~~k~RlvmR~D-~gkVlLN~~L--~~~m~~~~-~k~~v~~i~~~~~~~~~e~~~~~~ 171 (200)
.||-.+ |+|.|-. + ||.=+.+ .+.+.+-+.+ -.++..++ ++-.|++=.+.-+
T Consensus 16 ~yKK~d-GtL~l~~---------d---~i~W~p~~~~~~~vs~~~~~I~~qq~SP~~k~KVqLqi~l~~----------- 71 (108)
T 1pfj_A 16 RQKKQD-GALYLMA---------E---RIAWAPEGKDRFTISHMYADIKCQKISPEGKAKIQLQLVLHA----------- 71 (108)
T ss_dssp BCSSCB-CEEEEET---------T---EEEEECSSSSSCSEEEETTTCCCEEECCSSSSSCEEEEECSS-----------
T ss_pred eeecCC-ceEEEEc---------c---eEEEccCCCCCceEEEehhhhhcceeCCCCCccEEEEEEEeC-----------
Confidence 455444 8888876 2 6665554 4444433322 23344455 5555543223222
Q ss_pred cceEEEEEcCCH----HHHHHHHHHHHHhCC
Q 028997 172 AARTFLIRTKTE----EDRNKLATAIQEYAP 198 (200)
Q Consensus 172 ~~~~~liR~kt~----e~A~eL~~~i~e~~p 198 (200)
.++|++-|-++ .+|+.+++.|...+|
T Consensus 72 -~~~~~F~Ftn~~~a~~erd~VKd~L~~~l~ 101 (108)
T 1pfj_A 72 -GDTTNFHFSNESTAVKERDAVKDLLQQLLP 101 (108)
T ss_dssp -SCEEEEECCCSSCTTHHHHHHHHHHHHHHH
T ss_pred -CCceEEEEcCcHHHHHHHHHHHHHHHHHHH
Confidence 25888889886 467777777665543
No 25
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.09 E-value=1.6e+02 Score=21.22 Aligned_cols=14 Identities=29% Similarity=0.143 Sum_probs=10.5
Q ss_pred CCCCceeEEEEcee
Q 028997 70 EERGIIVVHEVKCK 83 (200)
Q Consensus 70 GEEdE~~vf~~RaK 83 (200)
-+|++.+.|+|++.
T Consensus 24 V~eG~~v~L~C~v~ 37 (118)
T 2edn_A 24 VETGKDAVVVAKVN 37 (118)
T ss_dssp EETTSCEECCEEEE
T ss_pred EeCCCCEEEEEEEe
Confidence 46788888888764
Done!