BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028999
(200 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8L467|BH104_ARATH Transcription factor bHLH104 OS=Arabidopsis thaliana GN=BHLH104
PE=2 SV=1
Length = 283
Score = 250 bits (639), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 128/187 (68%), Positives = 151/187 (80%), Gaps = 8/187 (4%)
Query: 20 NDISSTGVVPPENEN-----TRKRARSDSCSRPG-SKACREKLRRERLNDRFLDLSCILE 73
N SS G V E E+ +RKRAR+ SCSR G +KACRE+LRRE+LN+RF+DLS +LE
Sbjct: 99 NSGSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLE 158
Query: 74 PGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKA 133
PGR +TDKPAILDDAIR+LNQLR E+ +L+ETN+KL EEIKSLKAEKNELREEKL+LKA
Sbjct: 159 PGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKA 218
Query: 134 DKEKLEQQLKVMAMPTGGYMPTHPAAYHAGLNKMAVYPSYGLMPMWQYLPPSLHDTSRDH 193
DKEK EQQLK M P+ G++P PAA++ NKMAVYPSYG MPMW Y+P S+ DTSRD
Sbjct: 219 DKEKTEQQLKSMTAPSSGFIPHIPAAFNH--NKMAVYPSYGYMPMWHYMPQSVRDTSRDQ 276
Query: 194 ELRPPAA 200
ELRPPAA
Sbjct: 277 ELRPPAA 283
>sp|Q9LTC7|BH034_ARATH Transcription factor bHLH34 OS=Arabidopsis thaliana GN=BHLH34 PE=2
SV=1
Length = 320
Score = 226 bits (577), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 120/188 (63%), Positives = 146/188 (77%), Gaps = 9/188 (4%)
Query: 20 NDISSTGVVPPENEN--TRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRP 77
N SS G V E E + KR R+ SCS+PG+KACREKLRRE+LND+F+DLS +LEPGR
Sbjct: 135 NSSSSVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGRT 194
Query: 78 ARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEK 137
+TDK AILDDAIRV+NQLR E+ EL+ETN+KL EEIKSLKA+KNELREEKL+LKA+KEK
Sbjct: 195 PKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKEK 254
Query: 138 LEQQLKVMAMPTGGYMPT-HPAAYHAGLNKMAVYPSYGL----MPMWQYLPPSLHDTSRD 192
+EQQLK M +P+ G+MP+ HPAA+H+ +KMAV YG MPMW LPP+ DTSRD
Sbjct: 255 MEQQLKSMVVPSPGFMPSQHPAAFHS--HKMAVAYPYGYYPPNMPMWSPLPPADRDTSRD 312
Query: 193 HELRPPAA 200
+ PP A
Sbjct: 313 LKNLPPVA 320
>sp|Q9FH37|ILR3_ARATH Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1
Length = 234
Score = 183 bits (465), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/198 (50%), Positives = 129/198 (65%), Gaps = 14/198 (7%)
Query: 11 NAKISGSADNDISSTGVVPPENENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSC 70
+A + GSA N +S + ++KR R +S S SKACREK RR+RLND+F++L
Sbjct: 43 SAGVDGSAGNSEAS------KEPGSKKRGRCESSSATSSKACREKQRRDRLNDKFMELGA 96
Query: 71 ILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLI 130
ILEPG P +TDK AIL DA+R++ QLR E+Q+LK++N LQ++IK LK EKNELR+EK
Sbjct: 97 ILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRDEKQR 156
Query: 131 LKADKEKLEQQLKVMAMPTGGYMPTHP--------AAYHAGLNKMAVYPSYGLMPMWQYL 182
LK +KEKLEQQLK M P + P P A A NKM SY + MWQ++
Sbjct: 157 LKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPGVAMWQFM 216
Query: 183 PPSLHDTSRDHELRPPAA 200
PP+ DTS+DH LRPP A
Sbjct: 217 PPASVDTSQDHVLRPPVA 234
>sp|Q9C682|BH115_ARATH Transcription factor bHLH115 OS=Arabidopsis thaliana GN=BHLH115
PE=2 SV=1
Length = 226
Score = 171 bits (432), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 132/204 (64%), Gaps = 7/204 (3%)
Query: 2 PLIEFNFCVNAKISGSADNDISSTGVVPPENENTRKRARSDSCSRPGSKACREKLRRERL 61
P + +A +S D + V+ + ++RKR +++SC+ SKACREK RR+RL
Sbjct: 25 PTFPWQIDGSATVSVEVDGFLCDADVI--KEPSSRKRIKTESCTGSNSKACREKQRRDRL 82
Query: 62 NDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEK 121
ND+F +LS +LEPGR +TDK AI++DAIR++NQ R E+Q+LK+ N LQE+IK LK EK
Sbjct: 83 NDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEK 142
Query: 122 NELREEKLILKADKEKLEQQLKVMA---MPTGGYMPTHPAAYHAGL--NKMAVYPSYGLM 176
NELR+EK LK +KE+++QQLK + P ++P A +K+ + +Y
Sbjct: 143 NELRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNPQTLSQAQAPGSKLVPFTTYPGF 202
Query: 177 PMWQYLPPSLHDTSRDHELRPPAA 200
MWQ++PP+ DTS+DH LRPP A
Sbjct: 203 AMWQFMPPAAVDTSQDHVLRPPVA 226
>sp|Q9LT23|BH121_ARATH Transcription factor bHLH121 OS=Arabidopsis thaliana GN=BHLH121
PE=2 SV=1
Length = 337
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
Query: 42 DSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQ 101
D +R KA REKLRRE+LN+ F++L +L+P RP + DK IL D +++L +L +E
Sbjct: 55 DVSARKSQKAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVN 113
Query: 102 ELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKL----EQQLKVMAMPTGGYM 153
+LK L +E + L EKN+LREEK LK+D E L +Q+L+ M+ P G M
Sbjct: 114 KLKSEYTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMS-PWGAAM 168
>sp|Q8W2F2|BH011_ARATH Transcription factor bHLH11 OS=Arabidopsis thaliana GN=BHLH11 PE=2
SV=2
Length = 286
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 6/118 (5%)
Query: 44 CSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQEL 103
CS+ KA REKLRR++L ++FL+L L+P RP ++DK ++L D I++L + + L
Sbjct: 46 CSQ---KAEREKLRRDKLKEQFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQVDRL 101
Query: 104 KETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMAMPTGGYMPTHPAAYH 161
K E L +E + L EK+ELREEK LK+D E L Q + ++P + +YH
Sbjct: 102 KAEYETLSQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPWVPHY--SYH 157
>sp|Q9SN74|BH047_ARATH Transcription factor bHLH47 OS=Arabidopsis thaliana GN=BHLH47 PE=2
SV=1
Length = 240
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 32 NENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIR 91
N +R R + +KA RE+L+RE LN+ F++L+ LE + + K +IL +A R
Sbjct: 14 NATADERCRKGKVPKRINKAVRERLKREHLNELFIELADTLELNQ-QNSGKASILCEATR 72
Query: 92 VLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMAMPTGG 151
L + + + L++ + L E + EKNEL+EE +L+ + KL+ +++ A +
Sbjct: 73 FLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSVLETEISKLQNEIEARANQSKP 132
Query: 152 YMPTHPA 158
+ T PA
Sbjct: 133 DLNTSPA 139
>sp|Q9FIP9|ATR2_ARATH Transcription factor ATR2 OS=Arabidopsis thaliana GN=ATR2 PE=1 SV=1
Length = 592
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 27 VVPPENENTRKRARSDSCSR--PGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPA 84
VV P + RKR R + R P + E+ RRE+LN RF L ++ P ++ DK +
Sbjct: 391 VVEPPEKKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVV-P-NVSKMDKAS 448
Query: 85 ILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEKN 122
+L DAI +N+L+++ Q+ + E++Q+++ + E N
Sbjct: 449 LLGDAISYINELKSKLQQAESDKEEIQKKLDGMSKEGN 486
>sp|Q9CAD0|EGL1_ARATH Transcription factor EGL1 OS=Arabidopsis thaliana GN=BHLH2 PE=1
SV=1
Length = 596
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 42 DSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQ 101
D+ G+ A EK RRE+LN+RF+ L I+ ++ DK +ILDD I L L+ Q
Sbjct: 398 DTPEETGNHALSEKKRREKLNERFMTLRSIIPS--ISKIDKVSILDDTIEYLQDLQKRVQ 455
Query: 102 ELKETNEKLQEE--IKSLKAEKNELREEK 128
EL+ E E I +K +K + EE+
Sbjct: 456 ELESCRESADTETRITMMKRKKPDDEEER 484
>sp|O49687|BH004_ARATH Transcription factor MYC4 OS=Arabidopsis thaliana GN=BHLH4 PE=2
SV=1
Length = 589
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 27 VVPPENENTRKRARSDSCSR--PGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPA 84
VV PE + RKR R + R P + E+ RRE+LN RF L ++ ++ DK +
Sbjct: 393 VVEPEKK-PRKRGRKPANGREEPLNHVEAERQRREKLNQRFYSLRAVVP--NVSKMDKAS 449
Query: 85 ILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAE 120
+L DAI +++L+++ Q+ + E+LQ++I + E
Sbjct: 450 LLGDAISYISELKSKLQKAESDKEELQKQIDVMNKE 485
>sp|Q9FN69|GL3_ARATH Transcription factor GLABRA 3 OS=Arabidopsis thaliana GN=GL3 PE=1
SV=1
Length = 637
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 48 GSKACREKLRRERLNDRFLDLSCILEPGRPA--RTDKPAILDDAIRVLNQLRTESQELKE 105
G+ A EK RRE+LN+RF+ L I+ P+ + DK +ILDD I L +L QEL+
Sbjct: 440 GNHAVLEKKRREKLNERFMTLRKII----PSINKIDKVSILDDTIEYLQELERRVQELES 495
Query: 106 TNEKLQEEIKS 116
E E +
Sbjct: 496 CRESTDTETRG 506
>sp|Q39204|RAP1_ARATH Transcription factor MYC2 OS=Arabidopsis thaliana GN=RAP1 PE=1 SV=2
Length = 623
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 36 RKRARSDSCSR--PGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVL 93
+KR R + R P + E+ RRE+LN RF L ++ ++ DK ++L DAI +
Sbjct: 437 KKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVP--NVSKMDKASLLGDAIAYI 494
Query: 94 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADK 135
N+L+ S+ +K +EKLQ KN+L E KL L K
Sbjct: 495 NELK--SKVVKTESEKLQ--------IKNQLEEVKLELAGRK 526
>sp|Q1PF16|BH019_ARATH Transcription factor bHLH19 OS=Arabidopsis thaliana GN=BHLH19 PE=2
SV=1
Length = 295
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 3 LIEFNFCVNAKISGSADNDISSTGVVPPENENTRKRARSDSCSRP---GSKACREKLRRE 59
LI F+F N IS A +I +V T+++ S P E+ RRE
Sbjct: 74 LISFDFSSNV-ISSPAAEEIIMDKLV---GRGTKRKTCSHGTRSPVLAKEHVLAERKRRE 129
Query: 60 RLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNE 108
+L+++F+ LS +L PG + DK ILDDAI + QL+ + + LKE E
Sbjct: 130 KLSEKFIALSALL-PGLK-KADKVTILDDAISRMKQLQEQLRTLKEEKE 176
>sp|Q8S3F1|BH020_ARATH Transcription factor NAI1 OS=Arabidopsis thaliana GN=NAI1 PE=2 SV=1
Length = 320
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 54 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKE 105
E+ RR++LN+R + LS +L PG +TDK +L+DAI+ L QL+ ++L+E
Sbjct: 137 ERKRRQKLNERLIALSALL-PG-LKKTDKATVLEDAIKHLKQLQERVKKLEE 186
>sp|Q9LUK7|BH028_ARATH Transcription factor bHLH28 OS=Arabidopsis thaliana GN=BHLH28 PE=2
SV=1
Length = 511
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 46 RPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKE 105
+P + E++RRE+LN RF L ++ ++ DK ++L+DA+ +N+L++++
Sbjct: 340 KPLNHVEAERMRREKLNHRFYALRAVVP--NVSKMDKTSLLEDAVCYINELKSKA----- 392
Query: 106 TNEKLQEEIKSLKAEKNELRE 126
E ++ E +++ + NEL+E
Sbjct: 393 --ENVELEKHAIEIQFNELKE 411
>sp|Q96RT6|CTGE2_HUMAN Protein cTAGE-2 OS=Homo sapiens GN=CTAGE1 PE=1 SV=2
Length = 745
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 84 AILDDAIRVL----NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLE 139
A L+ +++ L NQ+ + E+ +T E+L E IK+L+ E+ L+ E +++ +KL+
Sbjct: 290 AKLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASLQSENTHFESENQKLQ 349
Query: 140 QQLKVMA 146
Q+LKVM
Sbjct: 350 QKLKVMT 356
>sp|Q9FT81|TT8_ARATH Transcription factor TT8 OS=Arabidopsis thaliana GN=TT8 PE=1 SV=2
Length = 518
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNE 108
S E+ RRE+LN++F+ L ++ + DK +IL D I +N LR EL+ T+
Sbjct: 363 SHVVAERRRREKLNEKFITLRSMVP--FVTKMDKVSILGDTIAYVNHLRKRVHELENTHH 420
Query: 109 KLQ 111
+ Q
Sbjct: 421 EQQ 423
>sp|Q8R311|CTGE5_MOUSE Cutaneous T-cell lymphoma-associated antigen 5 homolog OS=Mus
musculus GN=Ctage5 PE=1 SV=1
Length = 779
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 36/53 (67%)
Query: 94 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMA 146
NQ+ T+ E+ + E L E IKSL++++ L+ EK +++ +KL+Q+LKV+
Sbjct: 312 NQVYTQLSEVDQVKEDLTEHIKSLESKQASLQSEKTEFESESQKLQQKLKVIT 364
>sp|O15320|CTGE5_HUMAN Cutaneous T-cell lymphoma-associated antigen 5 OS=Homo sapiens
GN=CTAGE5 PE=1 SV=4
Length = 804
Score = 38.9 bits (89), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 84 AILDDAIRVL----NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLE 139
A L+ +++ L NQ+ + E+ +T E+L E IK+L+ E+ L+ E + + +KL+
Sbjct: 320 AKLNASLKTLEGERNQIYIQLSEVDKTKEELTEHIKNLQTEQASLQSENTHFENENQKLQ 379
Query: 140 QQLKVMA 146
Q+LKVM
Sbjct: 380 QKLKVMT 386
>sp|Q86UF2|CTGE6_HUMAN Putative protein cTAGE-6 OS=Homo sapiens GN=CTAGE6P PE=5 SV=2
Length = 777
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 94 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMA 146
N + + E+ +T E+L E IK+L+ ++ L+ E + +++ +KL+Q+LK+M
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQESLQSENIYFESENQKLQQKLKIMT 388
>sp|P0CG41|CTGE8_HUMAN Cutaneous T-cell lymphoma-associated antigen 8 OS=Homo sapiens
GN=CTAGE8 PE=2 SV=1
Length = 777
Score = 38.1 bits (87), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 94 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMA 146
N + + E+ +T E+L E IK+L+ ++ L+ E + +++ +KL+Q+LK+M
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQASLQSENIYFESENQKLQQKLKIMT 388
>sp|A4FU28|CTGE9_HUMAN Cutaneous T-cell lymphoma-associated antigen 9 OS=Homo sapiens
GN=CTAGE9 PE=2 SV=2
Length = 777
Score = 38.1 bits (87), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 94 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMA 146
N + + E+ +T E+L E IK+L+ ++ L+ E + +++ +KL+Q+LK+M
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQASLQSENIYFESENQKLQQKLKIMT 388
>sp|Q8IX94|CTGE4_HUMAN Cutaneous T-cell lymphoma-associated antigen 4 OS=Homo sapiens
GN=CTAGE4 PE=2 SV=3
Length = 777
Score = 38.1 bits (87), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 94 NQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVMA 146
N + + E+ +T E+L E IK+L+ ++ L+ E + +++ +KL+Q+LK+M
Sbjct: 336 NHIIIQLSEVDKTKEELTEHIKNLQTQQASLQSENIYFESENQKLQQKLKIMT 388
>sp|Q9LTS4|BH041_ARATH Putative transcription factor bHLH041 OS=Arabidopsis thaliana
GN=BHLH41 PE=4 SV=1
Length = 466
Score = 38.1 bits (87), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 54 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEE 113
E+ RRE+LN+ F L +L PG + DK ++L A L+ L+ E +L E N +++ +
Sbjct: 294 ERKRREKLNESFQALRSLLPPG--TKKDKASVLSIAREQLSSLQGEISKLLERNREVEAK 351
Query: 114 IKSLKAEKNELREEK 128
+ + +N+LR E+
Sbjct: 352 LAGEREIENDLRPEE 366
>sp|O97237|YGCC1_PLAF7 GRIP and coiled-coil domain-containing protein PFC0235w
OS=Plasmodium falciparum (isolate 3D7) GN=PFC0235w PE=4
SV=2
Length = 1139
Score = 37.7 bits (86), Expect = 0.045, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 95 QLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEK 137
+L+T ++ LK TNEKL++EI SL E ++ EE +LK KE+
Sbjct: 599 ELKTINEVLKNTNEKLEKEITSLLGEMKKIEEENKVLKIFKEE 641
>sp|O23090|BH014_ARATH Transcription factor bHLH14 OS=Arabidopsis thaliana GN=BHLH14 PE=2
SV=1
Length = 423
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 11/88 (12%)
Query: 33 ENTRKRARSDSCSRPG--SKACREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAI 90
E TR A + P S EK RRE+LN RF L I+ + +R DK ++L DA+
Sbjct: 231 ETTRVAAATKEKHHPAVLSHVEAEKQRREKLNHRFYALRAIVP--KVSRMDKASLLSDAV 288
Query: 91 RVLNQLRTESQELKETNEKLQEEIKSLK 118
+ + LK + L+ EIK +K
Sbjct: 289 SYI-------ESLKSKIDDLETEIKKMK 309
>sp|Q9ZUG9|BH066_ARATH Transcription factor bHLH66 OS=Arabidopsis thaliana GN=BHLH66 PE=2
SV=1
Length = 350
Score = 37.0 bits (84), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 17 SADNDISSTGVVPPENENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGR 76
SA T PP++ T+ RAR + P S A E+LRRER+ +R L ++ G
Sbjct: 119 SASTATGGTVAAPPQSR-TKIRARRGQATDPHSIA--ERLRRERIAERMKALQELVPNGN 175
Query: 77 PARTDKPAILDDAIRVLNQLRTESQELK 104
+TDK ++LD+ I + L+ + + L
Sbjct: 176 --KTDKASMLDEIIDYVKFLQLQVKVLS 201
>sp|Q9ZVX2|AMS_ARATH Transcription factor ABORTED MICROSPORES OS=Arabidopsis thaliana
GN=AMS PE=1 SV=2
Length = 571
Score = 36.6 bits (83), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 54 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKE 105
E+ RR++LNDR L ++ R + D+ +IL DAI + +L+ E++EL++
Sbjct: 319 ERRRRKKLNDRLYALRSLVP--RITKLDRASILGDAINYVKELQNEAKELQD 368
>sp|Q88Q71|CLPB_PSEPK Chaperone protein ClpB OS=Pseudomonas putida (strain KT2440)
GN=clpB PE=3 SV=1
Length = 854
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 17/152 (11%)
Query: 37 KRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTD---KPAILDDAIRVL 93
K A +D +K + +L D+ +DL I E R + KP +LD R L
Sbjct: 362 KVAITDGAIIAAAKLSHRYITDRQLPDKAIDL--IDEAASRIRMEIDSKPEVLDRLDRRL 419
Query: 94 NQLRTESQELKETN--------EKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVM 145
QL+ ESQ LK+ EKL EEI+ L+ E ++L E I ++K +++ ++
Sbjct: 420 IQLKVESQALKKEEDEAAKKRLEKLTEEIERLEREYSDLEE---IWASEKAEVQGSAQIQ 476
Query: 146 AMPTGGYMPTHPAAYHAGLNKMAVYPSYGLMP 177
A LN+MA YG++P
Sbjct: 477 QKIEQSRQELEAARRKGDLNRMAEL-QYGVIP 507
>sp|Q9T072|BH025_ARATH Transcription factor bHLH25 OS=Arabidopsis thaliana GN=BHLH25 PE=2
SV=2
Length = 328
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 20/102 (19%)
Query: 34 NTRKRARSDSCSRPGSKA----CREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDA 89
N + R+ SR S A E+ RRE+L RF+ LS ++ PG + DK ++L DA
Sbjct: 133 NRKGTKRAQPFSRNQSNAQDHIIAERKRREKLTQRFVALSALV-PGL-KKMDKASVLGDA 190
Query: 90 IRVLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLIL 131
++ + + LQE + L+ +K E R E ++L
Sbjct: 191 LKHI--------------KYLQERVGELEEQKKERRLESMVL 218
>sp|Q889C2|CLPB_PSESM Chaperone protein ClpB OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=clpB PE=3 SV=1
Length = 854
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 17/152 (11%)
Query: 37 KRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTD---KPAILDDAIRVL 93
K A +D +K + +L D+ +DL I E R + KP +LD R L
Sbjct: 362 KVAITDGAIIAAAKLSHRYITDRQLPDKAIDL--IDEAASRIRMEIDSKPEVLDRLERRL 419
Query: 94 NQLRTESQELKETN--------EKLQEEIKSLKAEKNELREEKLILKADKEKLEQQLKVM 145
QL+ E+Q LK+ EKLQEEI L+ E +L E I ++K ++ ++
Sbjct: 420 IQLKVEAQALKKEKDEAAIKRLEKLQEEIVRLEKEYADLEE---IWTSEKAEVTGSAQIQ 476
Query: 146 AMPTGGYMPTHPAAYHAGLNKMAVYPSYGLMP 177
A LN+MA YG++P
Sbjct: 477 QKIEQSRQELEAARRRGDLNRMAEL-QYGIIP 507
>sp|Q1PF17|BH018_ARATH Transcription factor bHLH18 OS=Arabidopsis thaliana GN=BHLH18 PE=2
SV=1
Length = 305
Score = 35.4 bits (80), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 36 RKRARSDSCSRPGSKA----CREKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIR 91
R R+ S +R S A E+ RRE+L RF+ LS ++ PG + DK ++L DAI+
Sbjct: 109 RGTKRAQSLTRSQSNAQDHILAERKRREKLTQRFVALSALI-PGL-KKMDKASVLGDAIK 166
Query: 92 VLNQLR 97
+ L+
Sbjct: 167 HIKYLQ 172
>sp|Q9ZPY8|AIB_ARATH Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis
thaliana GN=AIB PE=2 SV=2
Length = 566
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 22 ISSTGVVPPENENT-RKRARSDSCSR--PGSKACREKLRRERLNDRFLDLSCILEPGRPA 78
++ G+V +E RKR R + R P + E+ RRE+LN RF L ++ +
Sbjct: 365 LAGAGIVSVVDEKRPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVP--NIS 422
Query: 79 RTDKPAILDDAIRVLNQLR 97
+ DK ++L DAI + +L+
Sbjct: 423 KMDKASLLGDAISYIKELQ 441
>sp|Q8GX46|BH091_ARATH Transcription factor bHLH91 OS=Arabidopsis thaliana GN=BHLH91 PE=2
SV=1
Length = 428
Score = 35.0 bits (79), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 25 TGVVPPENENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKPA 84
+G++ E R++ R ++P + E+ RR LN+R+ L ++ P++ D+ +
Sbjct: 194 SGIIEFSKE-IRRKGRGKRKNKPFTT---ERERRCHLNERYEALKLLIP--SPSKGDRAS 247
Query: 85 ILDDAIRVLNQLRTESQELKETNEK 109
IL D I +N+LR ELK E+
Sbjct: 248 ILQDGIDYINELRRRVSELKYLVER 272
>sp|Q795Q5|YTTA_BACSU Uncharacterized membrane protein YttA OS=Bacillus subtilis (strain
168) GN=yttA PE=2 SV=2
Length = 248
Score = 34.7 bits (78), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 93 LNQLRTESQELKETNEKLQEEIKSLKAEKNELRE-------EKLILKADKEKLEQQLK 143
L +L+ E+ +LK+T + L+ EIK L+ + +L+E E L+ DK KLE QLK
Sbjct: 112 LEKLKNENSDLKKTQKSLKAEIKELQENQKQLKEDAKTAKAENETLRQDKTKLENQLK 169
>sp|Q63665|USF2_RAT Upstream stimulatory factor 2 OS=Rattus norvegicus GN=Usf2 PE=1
SV=2
Length = 346
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 54 EKLRRERLNDRFLDLSCIL----EPGRPARTDKPAILDDAIRVLNQLRTESQELKET--- 106
E+ RR+++N+ + LS I+ K IL A + +LR +Q ++ET
Sbjct: 244 ERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKE 303
Query: 107 NEKLQEEIKSLKAEKNELREEKLILKA 133
E+LQ + + L+ + EL+ E +L+A
Sbjct: 304 AERLQMDNELLRQQIEELKNENALLRA 330
>sp|Q64705|USF2_MOUSE Upstream stimulatory factor 2 OS=Mus musculus GN=Usf2 PE=1 SV=1
Length = 346
Score = 34.3 bits (77), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 54 EKLRRERLNDRFLDLSCIL----EPGRPARTDKPAILDDAIRVLNQLRTESQELKET--- 106
E+ RR+++N+ + LS I+ K IL A + +LR +Q ++ET
Sbjct: 244 ERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKE 303
Query: 107 NEKLQEEIKSLKAEKNELREEKLILKA 133
E+LQ + + L+ + EL+ E +L+A
Sbjct: 304 AERLQMDNELLRQQIEELKNENALLRA 330
>sp|Q15853|USF2_HUMAN Upstream stimulatory factor 2 OS=Homo sapiens GN=USF2 PE=2 SV=1
Length = 346
Score = 34.3 bits (77), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 54 EKLRRERLNDRFLDLSCIL----EPGRPARTDKPAILDDAIRVLNQLRTESQELKET--- 106
E+ RR+++N+ + LS I+ K IL A + +LR +Q ++ET
Sbjct: 244 ERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELRQTNQRMQETFKE 303
Query: 107 NEKLQEEIKSLKAEKNELREEKLILKA 133
E+LQ + + L+ + EL+ E +L+A
Sbjct: 304 AERLQMDNELLRQQIEELKNENALLRA 330
>sp|Q9LNJ5|BH013_ARATH Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2
SV=1
Length = 590
Score = 34.3 bits (77), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 54 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKL 110
E+ RRE+LN RF L ++ ++ DK ++L DA+ +N+L + + ++ E+L
Sbjct: 438 ERQRREKLNQRFYALRSVVP--NISKMDKASLLGDAVSYINELHAKLKVMEAERERL 492
>sp|P0C1G6|SWP70_BOVIN Switch-associated protein 70 OS=Bos taurus GN=SWAP70 PE=1 SV=1
Length = 585
Score = 34.3 bits (77), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 56 LRRER-LNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEI 114
L+R R L D +L L LE R AR D+ + R+L + ++ EL++ + + Q+ I
Sbjct: 416 LQRVRELEDMYLKLQEALEDERQARQDEETVRKLQARLLEEESSKRAELEKWHLEQQQAI 475
Query: 115 KSLKAEKNELREEKLI 130
++ +AEK EL +++I
Sbjct: 476 QTTEAEKQELENQRVI 491
>sp|Q9PTD7|CING_XENLA Cingulin OS=Xenopus laevis GN=cgn PE=1 SV=2
Length = 1360
Score = 34.3 bits (77), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 78 ARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKS---LKAEKNELREEKLILKAD 134
+ D + LD+A R L +L E +EL+E QEE+K LK KNEL E+K +L
Sbjct: 956 VKRDLESKLDEAQRSLKRLSLEYEELQEC---YQEEMKQKDHLKKTKNELEEQKRLLDKS 1012
Query: 135 KEKLEQQLKVMAMPTGGYM 153
+KL ++L M+ + G +
Sbjct: 1013 MDKLTRELDNMSNESRGSL 1031
>sp|Q9FUA4|SPT_ARATH Transcription factor SPATULA OS=Arabidopsis thaliana GN=SPT PE=1
SV=1
Length = 373
Score = 33.9 bits (76), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 54 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETN 107
EK RR R+N++ L ++ +TDK ++LD+AI L QL+ + Q L N
Sbjct: 206 EKRRRSRINEKMKALQSLIP--NSNKTDKASMLDEAIEYLKQLQLQVQMLTMRN 257
>sp|Q9FLH0|NMCP_ARATH Putative nuclear matrix constituent protein 1-like protein
OS=Arabidopsis thaliana GN=At5g65770 PE=2 SV=1
Length = 1042
Score = 33.9 bits (76), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 58 RERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSL 117
+ERL R LDL L+ + DK +D A + L L++E+ EL KL+EE+ L
Sbjct: 482 KERL--RKLDLE--LQQSLTSLEDKRKRVDSATQKLEALKSETSELSTLEMKLKEELDDL 537
Query: 118 KAEKNELREEKLILKADKEKLE 139
+A+K E+ E LK +K K E
Sbjct: 538 RAQKLEMLAEADRLKVEKAKFE 559
>sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein 1 OS=Homo sapiens
GN=SREBF1 PE=1 SV=2
Length = 1147
Score = 33.9 bits (76), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 54 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEE 113
EK R +ND+ ++L ++ G A+ +K A+L AI + L+ +Q+LK+ N L+
Sbjct: 332 EKRYRSSINDKIIELKDLVV-GTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTA 390
Query: 114 IKSLKAEKN 122
+ K+ K+
Sbjct: 391 VHKSKSLKD 399
>sp|Q9UH65|SWP70_HUMAN Switch-associated protein 70 OS=Homo sapiens GN=SWAP70 PE=1 SV=1
Length = 585
Score = 33.9 bits (76), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 56 LRRER-LNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEI 114
L+R R L D +L L LE R AR D+ + R+L + ++ EL++ + + Q+ I
Sbjct: 416 LQRVRELEDMYLKLQEALEDERQARQDEETVRKLQARLLEEESSKRAELEKWHLEQQQAI 475
Query: 115 KSLKAEKNELREEKLI----LKADKEKLEQ 140
++ +AEK EL ++++ L+ E+LEQ
Sbjct: 476 QTTEAEKQELENQRVLKEQALQEAMEQLEQ 505
>sp|A0KMZ8|RF1_AERHH Peptide chain release factor 1 OS=Aeromonas hydrophila subsp.
hydrophila (strain ATCC 7966 / NCIB 9240) GN=prfA PE=3
SV=1
Length = 362
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 78 ARTDKPAILDDAIRVLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKL-ILKADKE 136
A T + A L+D + Q R + L T + L+E+ L+ E+ +E+L + KA E
Sbjct: 37 ALTREYAQLEDIVHAFQQFRQAEENLDATRQMLEEDDADLR----EMAQEELPLAKATFE 92
Query: 137 KLEQQLKVMAMP 148
+ EQ L+VM +P
Sbjct: 93 EQEQALQVMLLP 104
>sp|Q9FJL4|BH078_ARATH Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=2
SV=1
Length = 498
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 13/133 (9%)
Query: 24 STGVVPPENENTRKRARSDSCSRPGSKACREKLRRERLNDRFLDLSCILEPGRPARTDKP 83
S PPE R+ S + E++RRE++ +R + L L PG T K
Sbjct: 286 SNNTKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGER-MKLLQDLVPGCNKVTGKA 344
Query: 84 AILDDAIRVLNQLRTE----SQELKETNE-KLQEEIKSLKAE-------KNELREEKLIL 131
+LD+ I + L+ + S +L N+ +L + +L ++ N L EE L
Sbjct: 345 LMLDEIINYVQSLQRQVEFLSMKLSSVNDTRLDFNVDALVSKDVMIPSSNNRLHEEGLQS 404
Query: 132 KADKEKLEQQLKV 144
K+ +QQL +
Sbjct: 405 KSSSHHHQQQLNI 417
>sp|Q0WNR2|BH090_ARATH Transcription factor bHLH90 OS=Arabidopsis thaliana GN=BHLH90 PE=2
SV=1
Length = 441
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 54 EKLRRERLNDRFLDLSCILEPGRPARTDKPAILDDAIRVLNQLRTESQELKETNEKLQE- 112
E+ RRER+N L ++ + + +K I DA+ +N+L E Q+L++ + + E
Sbjct: 269 ERKRRERINQAMYGLRAVVP--KITKLNKIGIFSDAVDYINELLVEKQKLEDELKGINEM 326
Query: 113 EIKSLKAEKNEL----REEKLILKADKEKLEQQLKVMAMPTG 150
E K + AE+ E++ K++K + ++K+ TG
Sbjct: 327 ECKEIAAEEQSAIADPEAERVSSKSNKRVKKNEVKIEVHETG 368
>sp|Q8C115|PKHH2_MOUSE Pleckstrin homology domain-containing family H member 2 OS=Mus
musculus GN=Plekhh2 PE=2 SV=3
Length = 1491
Score = 32.7 bits (73), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 81 DKPAILDDAIRV-LNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKL 129
+K A + + + V LN+L E+Q L+ N+ EEI++++++ EL+E+K+
Sbjct: 125 EKAAKIKEWVTVKLNELEVENQNLRFINQTQTEEIRAIQSKLQELQEKKI 174
>sp|Q6LVI6|ZAPB_PHOPR Cell division protein ZapB OS=Photobacterium profundum GN=zapB PE=3
SV=1
Length = 83
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Query: 89 AIRVLNQLRTESQELKETNEKLQEEIKSLKAEKNELREEKLILKADKEKLE 139
A+ ++ L+ E +ELKETNE SL AE NELR + L D +KL+
Sbjct: 19 AVDTISLLQMEIEELKETNE-------SLTAEANELRSNRETLAQDNDKLQ 62
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,004,164
Number of Sequences: 539616
Number of extensions: 3175578
Number of successful extensions: 26796
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 738
Number of HSP's that attempted gapping in prelim test: 22783
Number of HSP's gapped (non-prelim): 4480
length of query: 200
length of database: 191,569,459
effective HSP length: 112
effective length of query: 88
effective length of database: 131,132,467
effective search space: 11539657096
effective search space used: 11539657096
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)