BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>029000
MIPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTM
KPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPV
SKYVLPDENIRGRHVLSLHYLTLGRDDFRIFPLRWQRHKIKFGRLKCIFYLSIYKFISNL
FSVLNKSLAAVISRLQMTML

High Scoring Gene Products

Symbol, full name Information P value
argE
acetylornithine deacetylase 		gene from Dictyostelium discoideum 2.6e-31

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  029000
        (200 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

DICTYBASE|DDB_G0267380 - symbol:argE "acetylornithine dea...   344  2.6e-31   1


>DICTYBASE|DDB_G0267380 [details] [associations]
            symbol:argE "acetylornithine deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0005615 "extracellular
            space" evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008152
            "metabolic process" evidence=IEA] [GO:0008777 "acetylornithine
            deacetylase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
            process" evidence=IEA] [GO:0006526 "arginine biosynthetic process"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            InterPro:IPR002933 Pfam:PF01546 PROSITE:PS00758 PROSITE:PS00759
            UniPathway:UPA00068 InterPro:IPR011650 dictyBase:DDB_G0267380
            GO:GO:0005615 GenomeReviews:CM000150_GR GO:GO:0045335 GO:GO:0046872
            EMBL:AAFI02000003 eggNOG:COG0624 Pfam:PF07687 SUPFAM:SSF55031
            GO:GO:0006526 EMBL:U23957 RefSeq:XP_647163.1
            ProteinModelPortal:P54638 STRING:P54638 SWISS-2DPAGE:P54638
            PRIDE:P54638 EnsemblProtists:DDB0191165 GeneID:8615966
            KEGG:ddi:DDB_G0267380 KO:K01438 OMA:HKAINAM GO:GO:0008777
            Uniprot:P54638
        Length = 447

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 63/123 (51%), Positives = 81/123 (65%)

Query:     4 WKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPT 63
             W L   GK  HS +P++ +N +EL  EAL  IQ RFY DF PHPKE  Y F+  STMKPT
Sbjct:   216 WNLTAHGKNMHSAMPYRTVNSVELVNEALAEIQRRFYIDFKPHPKEAEYKFDCSSTMKPT 275

Query:    64 QWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKY 123
              W    G  N IPGE T+ GD+RLTPFY++ ++  +++ Y+ DIN NI +L  RGP SKY
Sbjct:   276 LWKPIAGSYNTIPGESTICGDIRLTPFYDMKEMRAKVEGYIKDINANITELRNRGPYSKY 335

Query:   124 VLP 126
              +P
Sbjct:   336 DVP 338


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.141   0.440    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      200       200   0.00087  111 3  11 22  0.43    32
                                                     31  0.45    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  600 (64 KB)
  Total size of DFA:  181 KB (2104 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.47u 0.06s 20.53t   Elapsed:  00:00:13
  Total cpu time:  20.47u 0.06s 20.53t   Elapsed:  00:00:13
  Start:  Fri May 10 02:01:08 2013   End:  Fri May 10 02:01:21 2013

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