Query 029000
Match_columns 200
No_of_seqs 290 out of 1841
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:17:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/029000.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/029000hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ram_A HMRA protein; two-domai 99.8 9.6E-20 3.3E-24 156.6 7.6 151 2-174 171-334 (394)
2 3io1_A Aminobenzoyl-glutamate 99.8 2.7E-18 9.3E-23 149.7 10.7 154 2-173 230-399 (445)
3 1ysj_A Protein YXEP; M20 famil 99.7 1.8E-18 6.2E-23 148.9 7.4 144 2-156 204-359 (404)
4 3n5f_A L-carbamoylase, N-carba 99.7 4.5E-18 1.5E-22 146.5 7.6 151 2-175 213-376 (408)
5 2rb7_A Peptidase, M20/M25/M40 99.7 7E-18 2.4E-22 143.4 8.3 147 2-165 178-327 (364)
6 1vgy_A Succinyl-diaminopimelat 99.7 1.5E-17 5E-22 142.5 9.1 151 2-165 185-347 (393)
7 1xmb_A IAA-amino acid hydrolas 99.7 3.6E-17 1.2E-21 141.4 11.2 143 2-156 198-357 (418)
8 3pfo_A Putative acetylornithin 99.7 4.1E-17 1.4E-21 141.3 9.4 161 2-165 216-397 (433)
9 3isz_A Succinyl-diaminopimelat 99.7 7E-17 2.4E-21 136.9 8.6 153 2-165 182-344 (377)
10 3ct9_A Acetylornithine deacety 99.7 7.2E-17 2.5E-21 136.7 8.5 135 2-150 176-312 (356)
11 3tx8_A Succinyl-diaminopimelat 99.7 1.2E-17 4.2E-22 141.7 3.0 154 2-165 179-339 (369)
12 1z2l_A Allantoate amidohydrola 99.6 1.4E-16 4.6E-21 137.7 5.6 142 2-156 216-370 (423)
13 3rza_A Tripeptidase; phosphory 99.6 1.6E-16 5.3E-21 136.4 5.9 137 2-153 202-350 (396)
14 2f7v_A Aectylcitrulline deacet 99.6 1.8E-16 6.1E-21 134.8 6.2 156 2-165 172-337 (369)
15 3gb0_A Peptidase T; NP_980509. 99.6 1.5E-16 5.2E-21 135.2 3.7 137 2-153 181-330 (373)
16 2v8h_A Beta-alanine synthase; 99.6 7.2E-16 2.4E-20 135.4 6.1 139 2-156 249-406 (474)
17 1cg2_A Carboxypeptidase G2; me 99.6 6.6E-16 2.3E-20 132.2 4.6 91 2-106 195-286 (393)
18 2pok_A Peptidase, M20/M25/M40 99.5 1.4E-14 4.8E-19 127.1 7.6 162 2-165 228-448 (481)
19 3ife_A Peptidase T; metallopep 99.5 5.9E-15 2E-19 128.0 0.7 137 2-154 238-390 (434)
20 3khx_A Putative dipeptidase sa 99.4 4.6E-14 1.6E-18 124.5 5.3 149 3-164 281-453 (492)
21 3pfe_A Succinyl-diaminopimelat 99.4 5.3E-14 1.8E-18 123.3 5.6 105 3-108 213-363 (472)
22 3dlj_A Beta-Ala-His dipeptidas 99.4 1.3E-13 4.6E-18 121.1 6.8 105 2-109 225-377 (485)
23 2qyv_A XAA-His dipeptidase; YP 99.4 2.7E-13 9.3E-18 119.2 6.1 67 2-85 202-271 (487)
24 1fno_A Peptidase T; metallo pe 99.4 3.1E-13 1.1E-17 116.4 4.7 148 2-166 211-375 (417)
25 3mru_A Aminoacyl-histidine dip 99.4 6.9E-13 2.4E-17 116.9 6.5 81 2-102 206-289 (490)
26 1lfw_A PEPV; hydrolase, dipept 99.2 4.4E-12 1.5E-16 110.7 5.6 147 3-164 258-429 (470)
27 2zog_A Cytosolic non-specific 99.2 2.6E-12 8.9E-17 112.4 3.8 104 2-108 218-369 (479)
28 2jvf_A De novo protein M7; tet 63.7 11 0.00036 23.9 4.0 34 77-110 15-48 (96)
29 2qyv_A XAA-His dipeptidase; YP 35.4 22 0.00076 30.3 2.9 99 58-165 346-454 (487)
30 1jy2_P Fibrinogen gamma-B chai 24.8 86 0.0029 18.0 3.1 24 171-194 23-46 (48)
No 1
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=99.79 E-value=9.6e-20 Score=156.62 Aligned_cols=151 Identities=9% Similarity=0.017 Sum_probs=112.3
Q ss_pred eEEEEEEeeecCCcC-CCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEE
Q 029000 2 IPWKLHVTGKLFHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 80 (200)
Q Consensus 2 ~~~~I~v~G~~gHas-~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~ 80 (200)
.+++|+++|+++|+| .|+.|+||+.++++++..|+.+ ....+ ...+++++.++ +|.+.|+||++|+
T Consensus 171 ~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l-~~~~~-----------~~~~~~~~~i~-gG~~~NvIP~~a~ 237 (394)
T 3ram_A 171 DVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQL-RQHIK-----------KDQRVHGVILD-GGKAANIIPDYTH 237 (394)
T ss_dssp EEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHH-GGGSC-----------TTCEEEEEEEE-BCSCTTBCCSEEE
T ss_pred eEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHH-HhhCC-----------CCCeeEEEEEE-CCCCCceeCCeEE
Confidence 589999999999999 9999999999999999999885 22211 12456677788 9999999999999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHhhc--cc-ccccccCcccccCCCccccccc-------e-ee-ecCCCCccccc
Q 029000 81 VSGDVRLTPFYNVTDVMKRLQEYVDDINEN--IE-KLDTRGPVSKYVLPDENIRGRH-------V-LS-LHYLTLGRDDF 148 (200)
Q Consensus 81 ~~~diR~~~~~~~e~i~~~i~~~~~~~~~~--v~-~~~~~~~~~~~~~~d~~l~~~~-------~-~~-~~~~~~~~eDf 148 (200)
+.+|+|+.+.++.+++.++|++++++.+.. ++ ++......++++.+|+.+...+ . .. .....+|++||
T Consensus 238 ~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~~~~~~~~~~d~~l~~~~~~a~~~~G~~~~~~~~~~g~~D~ 317 (394)
T 3ram_A 238 ARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPIQNGVNEFIKTPKLDDLFAKYAEEVGEAVIDDDFGYGSTDT 317 (394)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEESSCCBCCCCCCHHHHHHHHHHHHHTTCCBCCSCCCCBCCTH
T ss_pred EEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEecCCCCCccCCHHHHHHHHHHHHHhCcccccCCCCcccccH
Confidence 999999999999999999999999876543 32 2221123445566776543211 1 11 12346789999
Q ss_pred cccccccccccccccceeEEEEeeHH
Q 029000 149 RIFPLRWQRHKIKFGRLKCIFYLSIY 174 (200)
Q Consensus 149 ~~~~~~~~~~~~~fG~~~~~~~~~~~ 174 (200)
++|...++ ++++|+|..
T Consensus 318 ~~~~~~~P---------~~~~~~g~~ 334 (394)
T 3ram_A 318 GNVSHVVP---------TIHPHIKIG 334 (394)
T ss_dssp HHHTTTSC---------BCCCEEECS
T ss_pred HHHHHHhc---------hheEEeeec
Confidence 99987665 667777754
No 2
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=99.75 E-value=2.7e-18 Score=149.70 Aligned_cols=154 Identities=17% Similarity=0.131 Sum_probs=111.9
Q ss_pred eEEEEEEeeecCCc-CCCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEE
Q 029000 2 IPWKLHVTGKLFHS-GLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 80 (200)
Q Consensus 2 ~~~~I~v~G~~gHa-s~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~ 80 (200)
.+++|+++|+++|| +.|+.|+||+.++++++.+|+.+ .+.. .+..++++|.++ +|.+.|+||++|+
T Consensus 230 ~~~~i~v~Gk~~HaGs~P~~g~nAi~~aa~~i~~l~~l-~~~~-----------~~~~~~~vg~i~-gG~~~NvIP~~a~ 296 (445)
T 3io1_A 230 TKFDVQFSGVAAHAGGKPEDGRNALLAAAQAALGLHAI-PPHS-----------AGASRVNVGVMQ-AGTGRNVVPSSAL 296 (445)
T ss_dssp EEEEEEEECCCSSTTCCGGGCCCHHHHHHHHHHHHHTC-CCBT-----------TBCEEEEEEEEE-ECSCTTSCCCEEE
T ss_pred EEEEEEEEeecCCCCCCCcCCcCHHHHHHHHHHHHHHH-Hhhc-----------CCCeEEEEEEEe-cCCCCceeCCeEE
Confidence 48999999999998 79999999999999999999874 2221 124789999999 8899999999999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHhhc--cc-ccccccCcccccCCCccccccc----eeee-------cCC-CCcc
Q 029000 81 VSGDVRLTPFYNVTDVMKRLQEYVDDINEN--IE-KLDTRGPVSKYVLPDENIRGRH----VLSL-------HYL-TLGR 145 (200)
Q Consensus 81 ~~~diR~~~~~~~e~i~~~i~~~~~~~~~~--v~-~~~~~~~~~~~~~~d~~l~~~~----~~~~-------~~~-~~~~ 145 (200)
+++|+|+++.++.+++.++|++++++.+.. ++ ++.. ...++++.+|+++...+ .... ... .+|+
T Consensus 297 ~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~-~~~~~~~~~d~~l~~~~~~a~~~~~g~~~v~~~~~~~~g~ 375 (445)
T 3io1_A 297 LKVETRGESEAINQYVFERAQHVVAGAAAMYEARYELRM-MGAATASAPSPAWVDYLREQAARVPGVQQAVDRIAAPAGS 375 (445)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE-EEEECCCCCCHHHHHHHHHHHHHSTTCCBCBSSCCCCCBC
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE-ecCCCCcCCCHHHHHHHHHHHHHhcCCccceecCCCCccH
Confidence 999999999999999999999999876543 22 1211 12234566676543211 1111 112 3789
Q ss_pred ccccccccccccccccccceeEEEEeeH
Q 029000 146 DDFRIFPLRWQRHKIKFGRLKCIFYLSI 173 (200)
Q Consensus 146 eDf~~~~~~~~~~~~~fG~~~~~~~~~~ 173 (200)
+||++|...++. .|-+++++++|.
T Consensus 376 ~D~~~~~~~~P~----~gg~~~~~~~G~ 399 (445)
T 3io1_A 376 EDATLMMARVQA----RGGLASYMIFGT 399 (445)
T ss_dssp CTHHHHHHHHHH----TTCEEEEEEEEE
T ss_pred HHHHHHHHHhcc----cCCceEEEEEeC
Confidence 999999876542 122346666664
No 3
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=99.74 E-value=1.8e-18 Score=148.91 Aligned_cols=144 Identities=17% Similarity=0.239 Sum_probs=93.1
Q ss_pred eEEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEEE
Q 029000 2 IPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTV 81 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~~ 81 (200)
.+++|+++|+++|||.|+.|.||+.++++++.+|+++..+...+ ....++++|.|+ +|.+.|+||++|++
T Consensus 204 ~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~---------~~~~~~~vg~i~-gG~~~NvIP~~a~~ 273 (404)
T 1ysj_A 204 DRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISS---------LQNAVVSITRVQ-AGTSWNVIPDQAEM 273 (404)
T ss_dssp EEEEEEEECC--------CCCCHHHHHHHHHHHHC--------------------CCEEEEEEEE-ECSCSSSCCSEEEE
T ss_pred ceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCC---------CCCcEEEEEEEE-cCCCCceecCceEE
Confidence 47999999999999999999999999999999998642221111 124689999999 89999999999999
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhc--cc-ccccccCcccccCCCccccccc---------eeeecCCCCcccccc
Q 029000 82 SGDVRLTPFYNVTDVMKRLQEYVDDINEN--IE-KLDTRGPVSKYVLPDENIRGRH---------VLSLHYLTLGRDDFR 149 (200)
Q Consensus 82 ~~diR~~~~~~~e~i~~~i~~~~~~~~~~--v~-~~~~~~~~~~~~~~d~~l~~~~---------~~~~~~~~~~~eDf~ 149 (200)
++|+|+++.++.+++.+++++++++.+.. ++ ++... ...++..+|+++...+ .........|++|++
T Consensus 274 ~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~g~g~~~~~~~~g~tD~~ 352 (404)
T 1ysj_A 274 EGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKWF-PYLPSVQNDGTFLNAASEAAARLGYQTVHAEQSPGGEDFA 352 (404)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEE-EEECCEEECGGGHHHHHHHHHHTTCEEEECCCBSSCCTHH
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEEe-cCCCCccCCHHHHHHHHHHHHHhcCCccccccCCccchHH
Confidence 99999999999999999999999876432 22 11111 1122334455432211 111111456889999
Q ss_pred ccccccc
Q 029000 150 IFPLRWQ 156 (200)
Q Consensus 150 ~~~~~~~ 156 (200)
+|...++
T Consensus 353 ~~~~~~p 359 (404)
T 1ysj_A 353 LYQEKIP 359 (404)
T ss_dssp HHHTTSC
T ss_pred HHHHHCC
Confidence 9976654
No 4
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.73 E-value=4.5e-18 Score=146.51 Aligned_cols=151 Identities=17% Similarity=0.130 Sum_probs=110.3
Q ss_pred eEEEEEEeeecCCc-CCC-CCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeE
Q 029000 2 IPWKLHVTGKLFHS-GLP-HKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGEC 79 (200)
Q Consensus 2 ~~~~I~v~G~~gHa-s~P-~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a 79 (200)
.+++|+++|+++|+ +.| +.|+||+.++++++.+|+++. +++ . +.++++|.|+.|+.+.|+||++|
T Consensus 213 ~~~~i~v~G~~~Hags~P~~~g~nAi~~aa~~i~~l~~~~-~~~-----------~-~~~~~vg~i~gG~~~~NvIP~~a 279 (408)
T 3n5f_A 213 IWVKFTIEGKAEHAGATPMSLRRDPMAAAAQIIIVIEEEA-RRT-----------G-TTVGTVGQLHVYPGGINVIPERV 279 (408)
T ss_dssp EEEEEEEECCCEETTTSCTTTCCCHHHHHHHHHHHHHHHH-HHH-----------S-SCEEEEEEEEEESCCTTEECSEE
T ss_pred eEEEEEEEEEcCcCCCCccccccCHHHHHHHHHHHHHHHH-Hhc-----------C-CcEEEEEEEEecCCCCcCcCCeE
Confidence 57899999999999 689 589999999999999998863 221 1 47899999993348999999999
Q ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHhhc--cc-ccccccCcccccCCCccccccc----eee----ecCCCCccccc
Q 029000 80 TVSGDVRLTPFYNVTDVMKRLQEYVDDINEN--IE-KLDTRGPVSKYVLPDENIRGRH----VLS----LHYLTLGRDDF 148 (200)
Q Consensus 80 ~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~--v~-~~~~~~~~~~~~~~d~~l~~~~----~~~----~~~~~~~~eDf 148 (200)
++.+|+|+++.++.+++.++|++++++.+.. ++ ++.. ...++++.+|+++...+ ... ......|++||
T Consensus 280 ~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~-~~~~p~~~~d~~l~~~~~~a~~~~g~~~~~~~~~ggtD~ 358 (408)
T 3n5f_A 280 EFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTER-LQEMPPVLCSDEVKRAAEAACQKLGYPSFWLPSGAAHDS 358 (408)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE-EEEECCEECCHHHHHHHHHHHHHHTCCCCEEEESSCCTT
T ss_pred EEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE-ecCCCCcCCCHHHHHHHHHHHHHcCCCcccCCCcCchHH
Confidence 9999999999999999999999999875432 22 1111 11223345666543211 000 01134688999
Q ss_pred cccccccccccccccceeEEEEeeHHH
Q 029000 149 RIFPLRWQRHKIKFGRLKCIFYLSIYK 175 (200)
Q Consensus 149 ~~~~~~~~~~~~~fG~~~~~~~~~~~~ 175 (200)
++|...++ ++++|+|..+
T Consensus 359 ~~~~~~iP---------~~~~~~~~~~ 376 (408)
T 3n5f_A 359 VQLAPICP---------IGMIFVRSQD 376 (408)
T ss_dssp TTTTTTSC---------EEEEEECCGG
T ss_pred HHHHHHCC---------EEEEEeCCCC
Confidence 99987654 6788888764
No 5
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.72 E-value=7e-18 Score=143.39 Aligned_cols=147 Identities=19% Similarity=0.231 Sum_probs=106.7
Q ss_pred eEEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEEE
Q 029000 2 IPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTV 81 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~~ 81 (200)
.+++|+++|+++|||.|+.|+||+..+++++.+|+++. . .+. . .....++++|.++ +|...|+||++|++
T Consensus 178 ~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~-~--~~~-----~-~~~~~~~~vg~i~-gG~~~NviP~~a~~ 247 (364)
T 2rb7_A 178 IDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLF-A--EEN-----E-DHWHRTVNLGRIR-AGESTNKVPDVAEG 247 (364)
T ss_dssp EEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTS-C--CCC-----T-TCCSCEEEEEEEE-ECSCTTEECSEEEE
T ss_pred EEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhc-c--chh-----h-cCCCceEEEEEEe-cCCcCcccCcceEE
Confidence 58999999999999999999999999999999998741 1 000 0 0024789999999 88999999999999
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhcccccccccCcccccCCCcccccccee---eecCCCCccccccccccccccc
Q 029000 82 SGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRHVL---SLHYLTLGRDDFRIFPLRWQRH 158 (200)
Q Consensus 82 ~~diR~~~~~~~e~i~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~~l~~~~~~---~~~~~~~~~eDf~~~~~~~~~~ 158 (200)
.+|+|+++.++.+++.+++++++++ +++ .. ..++.+.+.|+++...+.. ..+....|++|+++|.. ....
T Consensus 248 ~~~iR~~~~~~~~~i~~~i~~~~~~---~v~-~~--~~~~~~~~~~~~l~~~~~~~~~~~g~~~~g~~D~~~~~~-~~~p 320 (364)
T 2rb7_A 248 WFNIRVTEHDDPGALIDKIRKTVSG---TVS-IV--RTVPVFLAADSPYTERLLALSGATAGKAHGASDARYLGE-NGLT 320 (364)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHCSS---EEE-EE--EEECCEECCCCHHHHHHHHHHCCEEEEESSCCGGGGTGG-GTCC
T ss_pred EEEEeeCCCCCHHHHHHHHHHHhhh---hEE-ec--cCCccccCCCCHHHHHHHHHHHhcCCCCCCCchHHHHHh-cCCC
Confidence 9999999999999999999988754 333 11 1222344455554332211 22333578899999976 2223
Q ss_pred cccccce
Q 029000 159 KIKFGRL 165 (200)
Q Consensus 159 ~~~fG~~ 165 (200)
.+.|||.
T Consensus 321 ~v~~Gp~ 327 (364)
T 2rb7_A 321 GVVWGAE 327 (364)
T ss_dssp EEECCCC
T ss_pred EEEECCC
Confidence 4557765
No 6
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.71 E-value=1.5e-17 Score=142.55 Aligned_cols=151 Identities=20% Similarity=0.265 Sum_probs=106.9
Q ss_pred eEEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCC-ccceeCCeEE
Q 029000 2 IPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECT 80 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~-~~NviP~~a~ 80 (200)
.+++|+++|+++|||.|+.|+||+..+++++.+|+....+.. . ....+.++++|.|+ +|. ..|+||++|+
T Consensus 185 ~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~--~------~~~~~~~~~v~~i~-gG~~~~NviP~~a~ 255 (393)
T 1vgy_A 185 LSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEG--N------EYFPPTSFQISNIN-GGTGATNVIPGELN 255 (393)
T ss_dssp EEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCC--C------SSCCCCEEEEEEEE-ECCSCTTEECSEEE
T ss_pred EEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhccccccc--c------cccCCCeEEEeeEc-CCCCCCcccCCeEE
Confidence 578999999999999999999999999999999987421110 0 11234688999999 665 8999999999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHhhccc-ccccccCcccccCCCccccccc----eeeec-----CCCCccccccc
Q 029000 81 VSGDVRLTPFYNVTDVMKRLQEYVDDINENIE-KLDTRGPVSKYVLPDENIRGRH----VLSLH-----YLTLGRDDFRI 150 (200)
Q Consensus 81 ~~~diR~~~~~~~e~i~~~i~~~~~~~~~~v~-~~~~~~~~~~~~~~d~~l~~~~----~~~~~-----~~~~~~eDf~~ 150 (200)
+.+|+|+++.++.+++.++|+++++..+.+++ +... ..+++..+|+++...+ ...++ ....|++|+++
T Consensus 256 ~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~--~~~p~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~g~~D~~~ 333 (393)
T 1vgy_A 256 VKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSC--SGQPFLTQAGKLTDVARAAIAETCGIEAELSTTGGTSDGRF 333 (393)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHTTCCEEEEEEE--EECCEECCSSHHHHHHHHHHHHHHSSCCEEECCSCCCTHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHhCCCeEEEEec--CCCcccCCCcHHHHHHHHHHHHHcCCCceEecCCccchHHH
Confidence 99999999999999999999999987654433 1111 1123333455432211 11111 13357899999
Q ss_pred ccc-ccccccccccce
Q 029000 151 FPL-RWQRHKIKFGRL 165 (200)
Q Consensus 151 ~~~-~~~~~~~~fG~~ 165 (200)
|.. .++ .+.|||.
T Consensus 334 ~~~~~~P--~v~~Gp~ 347 (393)
T 1vgy_A 334 IKAMAQE--LIELGPS 347 (393)
T ss_dssp HGGGEEE--EEECCSB
T ss_pred HHhCCCC--EEEECCC
Confidence 976 333 4567774
No 7
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=99.71 E-value=3.6e-17 Score=141.40 Aligned_cols=143 Identities=17% Similarity=0.269 Sum_probs=86.1
Q ss_pred eEEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEEE
Q 029000 2 IPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTV 81 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~~ 81 (200)
.+++|+++|+++|||.|+.|+||+.++++++.+|+.+..+...+ ..+.++++|.|+ +|.+.|+||++|++
T Consensus 198 ~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~---------~~~~t~~vg~i~-gG~~~NvIP~~a~~ 267 (418)
T 1xmb_A 198 GVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDP---------LDSKVVTVSKVN-GGNAFNVIPDSITI 267 (418)
T ss_dssp EEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSG---------GGCEEEEEEEEC---------CCEEEE
T ss_pred eeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCC---------CCCcEEEEEEEE-ecCcCCcCCCeEEE
Confidence 57999999999999999999999999999999998742221110 123688999999 88999999999999
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhc--cc-ccc--cc-cCcccccCCCccccccc----e-------eeecCCCCc
Q 029000 82 SGDVRLTPFYNVTDVMKRLQEYVDDINEN--IE-KLD--TR-GPVSKYVLPDENIRGRH----V-------LSLHYLTLG 144 (200)
Q Consensus 82 ~~diR~~~~~~~e~i~~~i~~~~~~~~~~--v~-~~~--~~-~~~~~~~~~d~~l~~~~----~-------~~~~~~~~~ 144 (200)
.+|+|+++ +.+++.+++++++++.+.. ++ ++. .. .++++++.+|+++...+ . ........|
T Consensus 268 ~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~~~~~~~p~~~~~~d~~l~~~~~~~~~~~~g~~~~~~~~~~~g 345 (418)
T 1xmb_A 268 GGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMG 345 (418)
T ss_dssp EEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEESSGGGCCCBCCEEECHHHHHHHHHHHHHHHCGGGEEECCCBCC
T ss_pred EEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEEccCCcccCCCccCCHHHHHHHHHHHHHhcCCcceeccCCCCC
Confidence 99999999 8999999999999876532 22 111 11 11133455565532111 1 111234568
Q ss_pred cccccccccccc
Q 029000 145 RDDFRIFPLRWQ 156 (200)
Q Consensus 145 ~eDf~~~~~~~~ 156 (200)
++|+++|...++
T Consensus 346 ~tD~~~~~~~~P 357 (418)
T 1xmb_A 346 SEDFSYFAETIP 357 (418)
T ss_dssp CCTHHHHHTTSC
T ss_pred cchHHHHHHHCC
Confidence 899999976554
No 8
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=99.69 E-value=4.1e-17 Score=141.26 Aligned_cols=161 Identities=12% Similarity=0.140 Sum_probs=108.9
Q ss_pred eEEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHhHhhcccC---CCCCCCccCCCCCCceEeeeEEecCCCccceeCCe
Q 029000 2 IPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDF---PPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGE 78 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~---~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~ 78 (200)
.+++|+++|+++|+|.|+.|+||+..+++++.+|+++..+.. ...+ .......+.++++|.|+ +|.+.|+||++
T Consensus 216 ~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~i~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~vg~i~-gG~~~NvIP~~ 292 (433)
T 3pfo_A 216 VWFRLRVRGTPVHVAYSETGTSAILSAMHLIRAFEEYTKELNAQAVRDP--WFGQVKNPIKFNVGIIK-GGDWASSTAAW 292 (433)
T ss_dssp EEEEEEEECCCCBGGGGGGSCCHHHHHHHHHHHHHHHHHHHHHHGGGCT--TTTTSSSCSCEEEEEEE-ECSCTTBCCCE
T ss_pred EEEEEEEEcCCCccCCCCcCcCHHHHHHHHHHHHHHHHHHhhhccccCc--cccccCCCceEEeeeEE-CCCCCcccCcE
Confidence 589999999999999999999999999999999987522100 0000 00001234689999999 88999999999
Q ss_pred EEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhc--------cc-ccccccCcccccCCCccccccc----eeeec-----C
Q 029000 79 CTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN--------IE-KLDTRGPVSKYVLPDENIRGRH----VLSLH-----Y 140 (200)
Q Consensus 79 a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~--------v~-~~~~~~~~~~~~~~d~~l~~~~----~~~~~-----~ 140 (200)
|++.+|+|++++++.+++.++|++++++.+.. ++ +......++...+.|+++...+ ...++ .
T Consensus 293 a~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~~~~~ 372 (433)
T 3pfo_A 293 CELDCRLGLLTGDTPQEAMRGIEKCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPLDAR 372 (433)
T ss_dssp EEEEEEEEECTTCCHHHHHHHHHHHHHHHHTTCHHHHHSCCEEEEEEEEECCEECCTTCHHHHHHHHHHHHHHSSCCCEE
T ss_pred EEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhCcccccCCeEEEEecccCCcccCCCCCHHHHHHHHHHHHHhCCCCcee
Confidence 99999999999999999999999999887542 22 1110111222344555432211 11111 1
Q ss_pred CCCccccccccccccccccccccce
Q 029000 141 LTLGRDDFRIFPLRWQRHKIKFGRL 165 (200)
Q Consensus 141 ~~~~~eDf~~~~~~~~~~~~~fG~~ 165 (200)
...|++|+++|........+-|||+
T Consensus 373 ~~~g~~D~~~~~~~~giP~v~~Gp~ 397 (433)
T 3pfo_A 373 LSTAVNDTRYYSVDYGIPALCYGPY 397 (433)
T ss_dssp EESSCCTHHHHHHTTCCCEEECCCC
T ss_pred eeeeeccHHHHHhhCCCCEEEECCC
Confidence 2467899999976422223457765
No 9
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.68 E-value=7e-17 Score=136.90 Aligned_cols=153 Identities=19% Similarity=0.213 Sum_probs=99.6
Q ss_pred eEEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCC-ccceeCCeEE
Q 029000 2 IPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGG-GINQIPGECT 80 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~-~~NviP~~a~ 80 (200)
.+++++++|+++|+|.|+.|+||+..+++++.+|++...+.. . ....+++++++.++ +|. ..|+||++|+
T Consensus 182 ~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~--~------~~~~~~~~~v~~i~-gg~~~~nvip~~~~ 252 (377)
T 3isz_A 182 ITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKG--N------EFFPPTSLQIANIH-AGTGSNNVIPAELY 252 (377)
T ss_dssp EEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCC--C------SSSCCCEEEEEEEE-ECCSCSSCCCSEEE
T ss_pred EEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhcccccc--c------cccCCceeEEEEEE-CCCCCCcccCCceE
Confidence 478999999999999999999999999999999987421110 0 11345789999999 665 8999999999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHhhcccccccccCcccccCCCccccccc----eeeec-----CCCCcccccccc
Q 029000 81 VSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRH----VLSLH-----YLTLGRDDFRIF 151 (200)
Q Consensus 81 ~~~diR~~~~~~~e~i~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~~l~~~~----~~~~~-----~~~~~~eDf~~~ 151 (200)
+.+|+|+++.++.+++.+++++.+++.+.+++ +......++...+|+++...+ ....+ ....|+.|++++
T Consensus 253 ~~~diR~~~~~~~~~i~~~i~~~~~~~g~~~~-i~~~~~~~p~~~~~~~l~~~l~~a~~~~~g~~~~~~~~~g~tDa~~~ 331 (377)
T 3isz_A 253 IQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYR-IEWNLSGKPFLTKPGKLLDSITSAIEETIGITPKAETGGGTSDGRFI 331 (377)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHTTCCEE-EEEEECCCCEECCTTHHHHHHHHHHHHHHSCCCEEEECSSCCSHHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHcCCCeE-EEEEecCCCCcCCCCHHHHHHHHHHHHHhCCCCeeeccCcccHHHHH
Confidence 99999999999999999999999987655543 111111123334455432211 11111 123577999988
Q ss_pred ccccccccccccce
Q 029000 152 PLRWQRHKIKFGRL 165 (200)
Q Consensus 152 ~~~~~~~~~~fG~~ 165 (200)
... ....+.|||+
T Consensus 332 ~~~-g~~~v~~Gp~ 344 (377)
T 3isz_A 332 ALM-GAEVVEFGPL 344 (377)
T ss_dssp HTT-TCEEEECCSB
T ss_pred HHc-CCCEEEECCC
Confidence 653 3334456665
No 10
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.68 E-value=7.2e-17 Score=136.74 Aligned_cols=135 Identities=15% Similarity=0.149 Sum_probs=98.2
Q ss_pred eEEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEEE
Q 029000 2 IPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTV 81 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~~ 81 (200)
.+++|+++|+++|||.| .|+||+..+++++.+|+.+. .+.. . ....+.++++|.++ +|...|+||++|++
T Consensus 176 ~~~~i~~~G~~~Ha~~p-~g~nAi~~~~~~i~~l~~~~-~~~~-~------~~~~~~~~~vg~i~-gG~~~NviP~~a~~ 245 (356)
T 3ct9_A 176 MVLDVTATGKAGHAARD-EGDNAIYKVLNDIAWFRDYR-FEKE-S------PLLGPVKMSVTVIN-AGTQHNVVPDKCTF 245 (356)
T ss_dssp EEEEEEEECBCCBTTSS-CCBCTTGGGHHHHHHHHHCC-CSCC-B------TTTBSCEEEEEEEE-ECSSTTBCCSEEEE
T ss_pred EEEEEEEECCCcccCCC-CCCCHHHHHHHHHHHHHhhh-cccc-c------ccCCCCcEEeeEEe-cCCcCCcCCCceEE
Confidence 58999999999999999 99999999999999998742 1111 0 01234789999999 88999999999999
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhcccccccccCcccccCCCccccccceeeec--CCCCccccccc
Q 029000 82 SGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRHVLSLH--YLTLGRDDFRI 150 (200)
Q Consensus 82 ~~diR~~~~~~~e~i~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~~l~~~~~~~~~--~~~~~~eDf~~ 150 (200)
.+|+|+++.++.+++.++++++++. +++... ...++..+++|+++...+..... ....|++||+.
T Consensus 246 ~~~iR~~~~~~~~~~~~~i~~~~~~---~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~tD~~~ 312 (356)
T 3ct9_A 246 VVDIRSNELYSNEDLFAEIRKHIAC---DAKARS-FRLNSSRIDEKHPFVQKAVKMGRIPFGSPTLSDQAL 312 (356)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHCCS---EEEESC-SCSCCEECCTTSHHHHHHHHTTCCCEEECSCCGGGG
T ss_pred EEEEeeCCCCCHHHHHHHHHHHhhC---eEEEee-ccCCCCCCCCCCHHHHHHHHHhcCCcccccccchhh
Confidence 9999999999999999999988754 333110 11223345566665433321111 12457899984
No 11
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.67 E-value=1.2e-17 Score=141.71 Aligned_cols=154 Identities=12% Similarity=0.097 Sum_probs=104.2
Q ss_pred eEEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEEE
Q 029000 2 IPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTV 81 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~~ 81 (200)
.+++|+++|+++|+|.|+.|+||+..+++++.+|++...+... . .+.....++++|.|+ +|.+.|+||++|++
T Consensus 179 ~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~-~-----~~~~~~~~~~vg~i~-gG~~~NvIP~~a~~ 251 (369)
T 3tx8_A 179 LRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVN-I-----DGLTYREGLNIVFCE-SGVANNVIPDLAWM 251 (369)
T ss_dssp EEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEE-E-----TTEEEECEEEEEEEE-ECSBTTBCCSEEEE
T ss_pred EEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccc-c-----CCcccCceEEEEEEE-CCCCCccccCcEEE
Confidence 5799999999999999999999999999999999875211100 0 000113689999999 88999999999999
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHh---hcccccccccCcccccCCCccccccceeeec----CCCCccccccccccc
Q 029000 82 SGDVRLTPFYNVTDVMKRLQEYVDDIN---ENIEKLDTRGPVSKYVLPDENIRGRHVLSLH----YLTLGRDDFRIFPLR 154 (200)
Q Consensus 82 ~~diR~~~~~~~e~i~~~i~~~~~~~~---~~v~~~~~~~~~~~~~~~d~~l~~~~~~~~~----~~~~~~eDf~~~~~~ 154 (200)
.+|+|+++.++.+++.++|++++++.+ .+++ +....+.. +...|+++...+....+ ....|++|+++|...
T Consensus 252 ~~diR~~~~~~~~~v~~~i~~~~~~~~~~g~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~ggtD~~~~~~~ 329 (369)
T 3tx8_A 252 NLNFRFAPNRDLNEAIEHVVETLELDGQDGIEWA-VEDGAGGA-LPGLGQQVTSGLIDAVGREKIRAKFGWTDVSRFSAM 329 (369)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHTTTTTSTTEEEE-EEEEECCB-CCCTTSHHHHHHHHHHCGGGEEECCSCCTHHHHHTT
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHhcccCCeEEE-EEecCCCC-CCCCCCHHHHHHHHHcCCCCCcccccccchHHHhhC
Confidence 999999999999999999999987643 2222 21111222 23334432211110011 134678999999653
Q ss_pred cccccccccce
Q 029000 155 WQRHKIKFGRL 165 (200)
Q Consensus 155 ~~~~~~~fG~~ 165 (200)
....+.|||+
T Consensus 330 -giP~~~~Gpg 339 (369)
T 3tx8_A 330 -GIPALNFGAG 339 (369)
T ss_dssp -TCCEEEECSS
T ss_pred -CCCEEEECCC
Confidence 1222345553
No 12
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.63 E-value=1.4e-16 Score=137.68 Aligned_cols=142 Identities=15% Similarity=0.137 Sum_probs=101.4
Q ss_pred eEEEEEEeeecCCcC-CCC-CCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeE
Q 029000 2 IPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGEC 79 (200)
Q Consensus 2 ~~~~I~v~G~~gHas-~P~-~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a 79 (200)
.+++|+++|+++||| .|+ .|+||+..+++++.+|+++..+ .. +..++++|.|+.++.+.|+||++|
T Consensus 216 ~~~~i~v~G~~~Ha~~~P~~~g~nAi~~~a~~i~~l~~~~~~-~~-----------~~~~~~vg~i~gg~~~~NvIP~~a 283 (423)
T 1z2l_A 216 RRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKR-MG-----------DPLVLTFGKVEPRPNTVNVVPGKT 283 (423)
T ss_dssp EEEEEEEECCCEETTTSCGGGCCCHHHHHHHHHHHHHHHHHH-HC-----------TTCEEECCCEEEESCCTTEECCEE
T ss_pred eEEEEEEEeEcCCCCCCccccCcCHHHHHHHHHHHHHHHHHh-cC-----------CCceEEEEEEeecCCcceeECCEE
Confidence 578999999999999 795 8999999999999999875322 11 136889999993348999999999
Q ss_pred EEEEEEeCCCCCCHHHHHHHHHHHHHHHhhc--cc-ccccccCcccccCCCccccccce--------eeecCCCCccccc
Q 029000 80 TVSGDVRLTPFYNVTDVMKRLQEYVDDINEN--IE-KLDTRGPVSKYVLPDENIRGRHV--------LSLHYLTLGRDDF 148 (200)
Q Consensus 80 ~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~--v~-~~~~~~~~~~~~~~d~~l~~~~~--------~~~~~~~~~~eDf 148 (200)
++.+|+|+++.++.+++.+++++++++.+.. ++ ++... ...++..+|+++...+. ........|++|+
T Consensus 284 ~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~ggtD~ 362 (423)
T 1z2l_A 284 TFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLW-MDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDA 362 (423)
T ss_dssp EEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEE-EEECCEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTH
T ss_pred EEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe-cCCCCccCCHHHHHHHHHHHHHcCCCeEEecCCCcccH
Confidence 9999999999999999999999998875432 22 11111 11233445655332110 0011134678999
Q ss_pred cccccccc
Q 029000 149 RIFPLRWQ 156 (200)
Q Consensus 149 ~~~~~~~~ 156 (200)
++|...++
T Consensus 363 ~~~~~~~p 370 (423)
T 1z2l_A 363 QIFAPRVP 370 (423)
T ss_dssp HHHTTTSC
T ss_pred HHHHhhCC
Confidence 99976543
No 13
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.63 E-value=1.6e-16 Score=136.35 Aligned_cols=137 Identities=13% Similarity=0.185 Sum_probs=99.9
Q ss_pred eEEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEEE
Q 029000 2 IPWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECTV 81 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~~ 81 (200)
.+++|+++|+++|+|.|+.|+||+..+++++.+|+.. ++. ...++++|.++ +|.+.|+||++|++
T Consensus 202 ~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~NvIP~~a~~ 266 (396)
T 3rza_A 202 MLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLG---QVD-----------EITTANIGKFH-GGSATNIVADEVIL 266 (396)
T ss_dssp EEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEEE
T ss_pred EEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccC---CCC-----------CCceeeeeEEe-cCCCCcccCceEEE
Confidence 5789999999999999999999999999999988642 111 23678999999 88999999999999
Q ss_pred EEEEeCCCCCCHHHHHHHHHHHHHHHhhc--cc-ccc-cccCcccccCCCccccccce-------ee-ecCCCCcccccc
Q 029000 82 SGDVRLTPFYNVTDVMKRLQEYVDDINEN--IE-KLD-TRGPVSKYVLPDENIRGRHV-------LS-LHYLTLGRDDFR 149 (200)
Q Consensus 82 ~~diR~~~~~~~e~i~~~i~~~~~~~~~~--v~-~~~-~~~~~~~~~~~d~~l~~~~~-------~~-~~~~~~~~eDf~ 149 (200)
.+|+|+.+.++.+++.+++++++++.+.. ++ ++. ....++...++|+++...+. .. ......|++|++
T Consensus 267 ~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~i~~~~~~p~~~~~~d~~l~~~~~~~~~~~g~~~~~~~~~g~tD~~ 346 (396)
T 3rza_A 267 EAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARNLGLSANTIISGGGSDGS 346 (396)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECCEECCTTSHHHHHHHHHHHHTTCCCCEEECSSCCHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEEEeccCCcccCCCcHHHHHHHHHHHHcCCCceecccceeccHH
Confidence 99999999999999999999998876543 21 111 11111222355665432210 00 011346889999
Q ss_pred cccc
Q 029000 150 IFPL 153 (200)
Q Consensus 150 ~~~~ 153 (200)
+|..
T Consensus 347 ~~~~ 350 (396)
T 3rza_A 347 IINT 350 (396)
T ss_dssp HHGG
T ss_pred HHhh
Confidence 9865
No 14
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.63 E-value=1.8e-16 Score=134.78 Aligned_cols=156 Identities=14% Similarity=0.074 Sum_probs=99.4
Q ss_pred eEEEEEEeeecCCcCCCC-CCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEE
Q 029000 2 IPWKLHVTGKLFHSGLPH-KAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 80 (200)
Q Consensus 2 ~~~~I~v~G~~gHas~P~-~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~ 80 (200)
.+++|+++|+++|+|.|+ .|+||+..+++++.+|+.+. .++.... ...... .++++|.++ +|...|+||++|+
T Consensus 172 ~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~-~~~~~~~---~~~~~~-~~~~vg~i~-gG~~~NviP~~a~ 245 (369)
T 2f7v_A 172 SSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHV-ESLAHAR---FGGLTG-LRFNIGRVD-GGIKANMIAPAAE 245 (369)
T ss_dssp EEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHH-HHTTTCE---ETTEES-CEEEEEEEE-ECSSTTSCCSEEE
T ss_pred EEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhh-hhhcccc---cCcccC-CceEEEEee-cCCCCCcCCCceE
Confidence 579999999999999999 99999999999999998752 2221100 000011 589999999 8899999999999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHhhcccccccccCcccccCCC-ccccccc----eeeec----CCCCcccccccc
Q 029000 81 VSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPD-ENIRGRH----VLSLH----YLTLGRDDFRIF 151 (200)
Q Consensus 81 ~~~diR~~~~~~~e~i~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d-~~l~~~~----~~~~~----~~~~~~eDf~~~ 151 (200)
+.+|+|+++.++.+++.+++++++++.+.+++ +.......++...+ +++...+ ...++ ....|++|+++|
T Consensus 246 ~~~diR~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~~~~~~~g~~D~~~~ 324 (369)
T 2f7v_A 246 LRFGFRPLPSMDVDGLLATFAGFADPAAAHFE-ETFRGPSLPSGDIARAEERRLAARDVADALDLPIGNAVDFWTEASLF 324 (369)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTCSSCCSEEE-EEEEECCBSCSSHHHHHHHHHHHHHHHHHTTCCBCCCBSSCCTHHHH
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHHHhcCceE-EEeccCCCCccCCCCCHHHHHHHHHHHHhhCCCCCccccccCcHHHH
Confidence 99999999999999999999998876543333 11110112222223 4332111 11111 235678999999
Q ss_pred ccccccccccccce
Q 029000 152 PLRWQRHKIKFGRL 165 (200)
Q Consensus 152 ~~~~~~~~~~fG~~ 165 (200)
... ....+.|||+
T Consensus 325 ~~~-g~p~v~~Gpg 337 (369)
T 2f7v_A 325 SAG-GYTALVYGPG 337 (369)
T ss_dssp HHT-TCCEEECCSS
T ss_pred hhC-CCCEEEECCC
Confidence 763 2233466663
No 15
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.61 E-value=1.5e-16 Score=135.15 Aligned_cols=137 Identities=11% Similarity=0.111 Sum_probs=99.5
Q ss_pred eEEEEEEeeecCCcC-CCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEE
Q 029000 2 IPWKLHVTGKLFHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 80 (200)
Q Consensus 2 ~~~~I~v~G~~gHas-~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~ 80 (200)
.+++|+++|+++|++ .|+.|+||+..+++++.+|+.. ++. ...++++|.++ +|.+.|+||++|+
T Consensus 181 ~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~---~~~-----------~~~~~~vg~i~-gG~~~Nvip~~~~ 245 (373)
T 3gb0_A 181 AKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLG---RID-----------SETTANIGRFE-GGTQTNIVCDHVQ 245 (373)
T ss_dssp EEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCE---EEE-----------TTEEEEEEEEE-ECSCTTBCCCEEE
T ss_pred EEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccc---cCC-----------CccccceeEEe-cCcccccccceEE
Confidence 578999999999999 8999999999999999887641 111 23678999999 8899999999999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHhhc--cc-ccc-cccCcccccCCCccccccce-------e-eecCCCCccccc
Q 029000 81 VSGDVRLTPFYNVTDVMKRLQEYVDDINEN--IE-KLD-TRGPVSKYVLPDENIRGRHV-------L-SLHYLTLGRDDF 148 (200)
Q Consensus 81 ~~~diR~~~~~~~e~i~~~i~~~~~~~~~~--v~-~~~-~~~~~~~~~~~d~~l~~~~~-------~-~~~~~~~~~eDf 148 (200)
+.+|+|+.+.++.+++.+++++++++.+.. ++ ++. ....++...++|+++...+. . .......|++|+
T Consensus 246 ~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~g~~D~ 325 (373)
T 3gb0_A 246 IFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEVNVMYPGFKFADGDHVVEVAKRAAEKIGRTPSLHQSGGGSDA 325 (373)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEECCEECCTTCHHHHHHHHHHHHTTCCCEEEECSSCCHH
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEEecccCCcccCCCCHHHHHHHHHHHHhCCCceEecccCcchH
Confidence 999999999999999999999998876543 21 111 11112222345665432210 0 011134688999
Q ss_pred ccccc
Q 029000 149 RIFPL 153 (200)
Q Consensus 149 ~~~~~ 153 (200)
++|..
T Consensus 326 ~~~~~ 330 (373)
T 3gb0_A 326 NVIAG 330 (373)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 99965
No 16
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.59 E-value=7.2e-16 Score=135.38 Aligned_cols=139 Identities=16% Similarity=0.039 Sum_probs=101.3
Q ss_pred eEEEEEEeeecCCcC-CCC-CCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCC-CccceeCCe
Q 029000 2 IPWKLHVTGKLFHSG-LPH-KAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPG-GGINQIPGE 78 (200)
Q Consensus 2 ~~~~I~v~G~~gHas-~P~-~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg-~~~NviP~~ 78 (200)
.+++|+++|+++||| .|+ .|+||+..+++++.+|+.+..+. ..++++|.|+ +| ++.|+||++
T Consensus 249 ~~~~i~v~G~~~Hsg~~P~~~g~nAi~~~a~~i~~l~~~~~~~--------------~~t~~vg~i~-gG~~~~NvIP~~ 313 (474)
T 2v8h_A 249 NWQKVTVHGVGAHAGTTPWRLRKDALLMSSKMIVAASEIAQRH--------------NGLFTCGIID-AKPYSVNIIPGE 313 (474)
T ss_dssp EEEEEEEECCCEETTTCCGGGCCCHHHHHHHHHHHHHHHHHHT--------------TCEEECCCEE-EESCCTTEECSE
T ss_pred EEEEEEEEeecCCCCCCCcccCCCHHHHHHHHHHHHHHHHhhc--------------CCEEEEEEEE-ecCCCCceeCCE
Confidence 579999999999999 597 89999999999999998752221 2688999999 65 899999999
Q ss_pred EEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhc-----cc-ccccccCcccccCCCccccccce----------eeecCCC
Q 029000 79 CTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN-----IE-KLDTRGPVSKYVLPDENIRGRHV----------LSLHYLT 142 (200)
Q Consensus 79 a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~-----v~-~~~~~~~~~~~~~~d~~l~~~~~----------~~~~~~~ 142 (200)
|++.+|+|+++.++.+++.++|++.+++.+.. ++ ++... ..++++.+|+++...+. .......
T Consensus 314 a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~~l~~~~~~a~~~~G~~~~~~~~~~ 392 (474)
T 2v8h_A 314 VSFTLDFRHPSDDVLATMLKEAAAEFDRLIKINDGGALSYESETL-QVSPAVNFHEVCIECVSRSAFAQFKKDQVRQIWS 392 (474)
T ss_dssp EEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCCTTCCCEEEEEEE-EEECCEECCHHHHHHHHHHHHHHSCGGGEEEEEE
T ss_pred EEEEEEecCCChHHHHHHHHHHHHHHHHHHhhcccCCcEEEEEEe-cCCCCccCCHHHHHHHHHHHHHcCCCCcceecCC
Confidence 99999999999999999999999999875432 22 11111 12233445655332110 0111134
Q ss_pred Cccccccccccccc
Q 029000 143 LGRDDFRIFPLRWQ 156 (200)
Q Consensus 143 ~~~eDf~~~~~~~~ 156 (200)
.|+.|+++|...++
T Consensus 393 ~ggtD~~~~~~~~P 406 (474)
T 2v8h_A 393 GAGHDSCQTAPHVP 406 (474)
T ss_dssp SSCCTHHHHTTTSC
T ss_pred cCCccHHHHHhhCC
Confidence 67899999977643
No 17
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.58 E-value=6.6e-16 Score=132.22 Aligned_cols=91 Identities=24% Similarity=0.255 Sum_probs=80.9
Q ss_pred eEEEEEEeeecCCcC-CCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEE
Q 029000 2 IPWKLHVTGKLFHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 80 (200)
Q Consensus 2 ~~~~I~v~G~~gHas-~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~ 80 (200)
.+++|+++|+++||+ .|+.|+||+..+++++.+|+.+ .+. ....++++|.++ +|...|+||++|+
T Consensus 195 ~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~-~~~------------~~~~~~~v~~i~-gG~~~NvIP~~a~ 260 (393)
T 1cg2_A 195 AYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNI-DDK------------AKNLRFNWTIAK-AGNVSNIIPASAT 260 (393)
T ss_dssp EEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGG-CBT------------TTTEEEEEEEEE-ECSSTTEECSEEE
T ss_pred EEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhh-hCc------------ccCceEEEEEEe-CCCCCCEECcccE
Confidence 579999999999996 7999999999999999999874 221 123689999999 8899999999999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHH
Q 029000 81 VSGDVRLTPFYNVTDVMKRLQEYVDD 106 (200)
Q Consensus 81 ~~~diR~~~~~~~e~i~~~i~~~~~~ 106 (200)
+.+|+|+++.++.+++.++|++++++
T Consensus 261 ~~~~iR~~~~~~~~~i~~~i~~~~~~ 286 (393)
T 1cg2_A 261 LNADVRYARNEDFDAAMKTLEERAQQ 286 (393)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHTS
T ss_pred EEEEEeeCChhhHHHHHHHHHHHHhc
Confidence 99999999999999999999998875
No 18
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.52 E-value=1.4e-14 Score=127.14 Aligned_cols=162 Identities=14% Similarity=0.061 Sum_probs=104.0
Q ss_pred eEEEEEEeeec--CCcCCCCCCCCHHHHHHHHHHHHhHhhc----------------------ccCCC------------
Q 029000 2 IPWKLHVTGKL--FHSGLPHKAINPLELAMEALKVIQTRFY----------------------KDFPP------------ 45 (200)
Q Consensus 2 ~~~~I~v~G~~--gHas~P~~g~NAi~~aa~~l~~l~~~~~----------------------~~~~~------------ 45 (200)
.+++|+++|++ +||+.|+.|.||+..+++++.+|++... .+++.
T Consensus 228 ~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (481)
T 2pok_A 228 VTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGL 307 (481)
T ss_dssp EEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCBCCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTC
T ss_pred EEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCceeccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCc
Confidence 57899999999 8999999999999999999999875310 00000
Q ss_pred CCCCc-cCC------CCCCceEeeeEEecCCC----ccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhc-cc-
Q 029000 46 HPKEQ-VYG------FETPSTMKPTQWSYPGG----GINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN-IE- 112 (200)
Q Consensus 46 ~~~~~-~~~------~~~~~t~~~g~i~~gg~----~~NviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~-v~- 112 (200)
..+.. ..+ .....++++|.|+ +|. ..|+||++|++.+|+|++++++.+++.++|+++++..+.. ++
T Consensus 308 ~~~~~~~~g~~~~~~~~~~~t~~vg~i~-gG~~~~~~~NvIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~~~~~v 386 (481)
T 2pok_A 308 ELPLLQEERMAFLKRFFFDPALNIEGIQ-SGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGFDKVEL 386 (481)
T ss_dssp CSCCSSCSHHHHHHHHHHSCEEEEEEEE-EECCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHTTCTTEEE
T ss_pred ccccccccchhHHHHHhhcCeEeEEeee-cCCCCCCCCeeccCeeEEEEEEEeCCCCCHHHHHHHHHHHHHhhCCCceEE
Confidence 00000 000 0023688999999 654 7899999999999999999999999999999999876421 22
Q ss_pred ccccccCcccccCCCccccccc----eeeec-----CCCCccc-cccccccccccccccccce
Q 029000 113 KLDTRGPVSKYVLPDENIRGRH----VLSLH-----YLTLGRD-DFRIFPLRWQRHKIKFGRL 165 (200)
Q Consensus 113 ~~~~~~~~~~~~~~d~~l~~~~----~~~~~-----~~~~~~e-Df~~~~~~~~~~~~~fG~~ 165 (200)
++.. ..++..++.|+++...+ ...++ ....|+. |+++|........+.|||+
T Consensus 387 ~~~~-~~p~~~~~~d~~l~~~~~~a~~~~~g~~~~~~~~~gg~~D~~~~~~~~g~p~v~~G~g 448 (481)
T 2pok_A 387 YYTL-GEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHTVFDALEVPMVAFGLG 448 (481)
T ss_dssp EEEE-EECCBCCCSCSHHHHHHHHHHTTTCTTCEEEESCBSSCCTHHHHHHHHCCCEEBCCSB
T ss_pred EEcc-CCCcccCCCCCHHHHHHHHHHHHHcCCCccccccCCCCCchHHHHHHcCCCEEEecCC
Confidence 1111 12233455566532211 11111 1234555 9998875532223456664
No 19
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.46 E-value=5.9e-15 Score=128.03 Aligned_cols=137 Identities=15% Similarity=0.058 Sum_probs=94.4
Q ss_pred eEEEEEEeeecCCcC-CCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEE
Q 029000 2 IPWKLHVTGKLFHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 80 (200)
Q Consensus 2 ~~~~I~v~G~~gHas-~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~ 80 (200)
.+++|+++|+++||+ .|+.|+||+.++++++.+|++. ..+. ..+.++|.++ . +..|+||++|+
T Consensus 238 ~~~~i~v~G~~~Hag~~P~~g~nAi~~aa~~i~~l~~~---~~~~-----------~~~~~~g~i~-~-g~~n~iP~~a~ 301 (434)
T 3ife_A 238 AGAKLTFNGTNTHPGTAKNKMRNATKLAMEFNGHLPVE---EAPE-----------YTEGYEGFYH-L-LSLNGDVEQSK 301 (434)
T ss_dssp EEEEEEEECBCCCGGGCTTTCBCHHHHHHHHHHTSCTT---CSGG-----------GCCTTCCEEE-E-EEEEECSSEEE
T ss_pred EEEEEEEEEEecCCCCCcccchhHHHHHHHHHHhcccc---cCCC-----------cceeeeEEEE-e-eeEeEecCeEE
Confidence 589999999999987 7999999999999999988763 1111 1233456666 3 35899999999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHhhc-----cc-ccccccCcc-cccCCCccccccce-------e-eecCCCCcc
Q 029000 81 VSGDVRLTPFYNVTDVMKRLQEYVDDINEN-----IE-KLDTRGPVS-KYVLPDENIRGRHV-------L-SLHYLTLGR 145 (200)
Q Consensus 81 ~~~diR~~~~~~~e~i~~~i~~~~~~~~~~-----v~-~~~~~~~~~-~~~~~d~~l~~~~~-------~-~~~~~~~~~ 145 (200)
+.+|+|+++.++.+++.++|++++++.+.. ++ ++....+++ ..+++|+++...+. . .......|+
T Consensus 302 ~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~d~~l~~~~~~a~~~~G~~~~~~~~~gg 381 (434)
T 3ife_A 302 AYYIIRDFDRKNFEARKNTIENIVKQMQEKYGQDAVVLEMNDQYYNMLEKIEPVREIVDIAYEAMKSLNIEPNIHPIRGG 381 (434)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHHHHHCGGGEEEEEEEEECCTHHHHGGGTHHHHHHHHHHHHTTCCCEECCBSSC
T ss_pred EEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEeecccchhccccCCHHHHHHHHHHHHHhCCCCEEeecccC
Confidence 999999999999999999999999865422 32 111111111 13556665432210 0 111234688
Q ss_pred ccccccccc
Q 029000 146 DDFRIFPLR 154 (200)
Q Consensus 146 eDf~~~~~~ 154 (200)
+|+++|...
T Consensus 382 tD~~~~~~~ 390 (434)
T 3ife_A 382 TDGSQLSYM 390 (434)
T ss_dssp CHHHHHHHT
T ss_pred chHHHHhhC
Confidence 999999754
No 20
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.45 E-value=4.6e-14 Score=124.47 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=77.9
Q ss_pred EEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHh------Hhh---cccCCCCCCCcc------CCCCCCceEeeeEEec
Q 029000 3 PWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQ------TRF---YKDFPPHPKEQV------YGFETPSTMKPTQWSY 67 (200)
Q Consensus 3 ~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~------~~~---~~~~~~~~~~~~------~~~~~~~t~~~g~i~~ 67 (200)
+++|+++|+++|||.|+.|+|||..+++++.+|+ .+. .+.+........ .......++++|.|+
T Consensus 281 ~~~i~v~GkaaHas~P~~G~NAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~d~~~G~~t~n~g~i~- 359 (492)
T 3khx_A 281 ILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVIT- 359 (492)
T ss_dssp EEEEEEECBCCCC------BCHHHHHHHHHTTSCBCHHHHHHHHHHHHHTTTCTTSGGGTCC-------CCEEEEEEEE-
T ss_pred eEEEEEEeEEcccCCCccCccHHHHHHHHHHhcCCCchHHHHHHHHHHhhCCCCCccccCCccccCCcCccEEeeeEEE-
Confidence 7999999999999999999999999999999886 110 011100000000 011234678888888
Q ss_pred CCCccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhcccccccccCcccccCCCcccccccee----eec----
Q 029000 68 PGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRHVL----SLH---- 139 (200)
Q Consensus 68 gg~~~NviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~~l~~~~~~----~~~---- 139 (200)
++. |++|++.+|+|+++.++.+++.++++++++..+.+++. .. ..++.+.+.|+++...+.. ..+
T Consensus 360 ~g~-----P~~a~~~idiR~~~~~~~~~v~~~i~~~~~~~g~~~~i-~~-~~~p~~~~~d~~lv~~l~~a~~~~~G~~~~ 432 (492)
T 3khx_A 360 YDN-----ENAGLFGINLRYPEGFEFEKAMDRFANEIQQYGFEVKL-GK-VQPPHYVDKNDPFVQKLVTAYRNQTNDMTE 432 (492)
T ss_dssp EET-----TTCCEEEEEEEECTTCCHHHHHHHHHHHHGGGTEEEEE-EE-EECCBCCGGGCHHHHHHHHHHHTTCC----
T ss_pred Eec-----CCEEEEEEEeeCCCCCCHHHHHHHHHHHHHHcCCEEEE-ec-cCCceecCCCcHHHHHHHHHHHHHhCCCCe
Confidence 443 99999999999999999999999999998755444432 11 1223345566664332211 111
Q ss_pred -CCCCccccccccccccccccccccc
Q 029000 140 -YLTLGRDDFRIFPLRWQRHKIKFGR 164 (200)
Q Consensus 140 -~~~~~~eDf~~~~~~~~~~~~~fG~ 164 (200)
....|+.|.+++.. ++.|||
T Consensus 433 ~~~~gggtDa~~~~~-----~v~~G~ 453 (492)
T 3khx_A 433 PYTIGGGTYARNLDK-----GVAFGA 453 (492)
T ss_dssp --------------------------
T ss_pred EEeeehhHHHHHhhC-----ceEECC
Confidence 12356789988864 466775
No 21
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=99.45 E-value=5.3e-14 Score=123.34 Aligned_cols=105 Identities=11% Similarity=0.068 Sum_probs=77.9
Q ss_pred EEEEEEeeecCCcCCCCCC-CCHHHHHHHHHHHHhHhhc---------ccCCC-------------------CCCC-ccC
Q 029000 3 PWKLHVTGKLFHSGLPHKA-INPLELAMEALKVIQTRFY---------KDFPP-------------------HPKE-QVY 52 (200)
Q Consensus 3 ~~~I~v~G~~gHas~P~~g-~NAi~~aa~~l~~l~~~~~---------~~~~~-------------------~~~~-~~~ 52 (200)
+++|+++|+++|||.|+.+ .||+..+++++.+|++... +.+++ ..+. .+.
T Consensus 213 ~~~v~~~G~~~H~~~~~~~~~nai~~~~~~i~~l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (472)
T 3pfe_A 213 KLTVELINEGVHSGSASGIVADSFRVARQLISRIEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSA 292 (472)
T ss_dssp EEEEESCSSCBCHHHHTTTSCCHHHHHHHHHHHHBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTC
T ss_pred EEEEEeCCCCcccCCCCCCCCCHHHHHHHHHHHhhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCc
Confidence 3557779999999998855 5999999999999987521 00000 0000 000
Q ss_pred -CCCC-----------CceEeeeEEecCC----CccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 029000 53 -GFET-----------PSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 108 (200)
Q Consensus 53 -~~~~-----------~~t~~~g~i~~gg----~~~NviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~ 108 (200)
.... ..++++|.|+ +| ++.|+||++|++.+|+|+.+.++.+++.++|+++++..+
T Consensus 293 ~~~~~~~~~~~~~~~~~~tl~i~~i~-gG~~~g~a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~ 363 (472)
T 3pfe_A 293 KPVIQDKQQLILNRTWRPALTVTGAD-GFPAIADAGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP 363 (472)
T ss_dssp CCSCSCHHHHHHHHHTSCEEEEEEEE-SCCCTTTCCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC
T ss_pred cccccchHHHHHHhhcCCcEEEeeee-cCcCCCCCCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC
Confidence 0000 3689999999 54 789999999999999999999999999999999998643
No 22
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=99.43 E-value=1.3e-13 Score=121.13 Aligned_cols=105 Identities=17% Similarity=0.171 Sum_probs=75.8
Q ss_pred eEEEEEEeeecC--CcCCCCCCCCHHHHHHHHHHHHhHhhccc----CCC----CCCC--------ccCCCC--------
Q 029000 2 IPWKLHVTGKLF--HSGLPHKAINPLELAMEALKVIQTRFYKD----FPP----HPKE--------QVYGFE-------- 55 (200)
Q Consensus 2 ~~~~I~v~G~~g--Has~P~~g~NAi~~aa~~l~~l~~~~~~~----~~~----~~~~--------~~~~~~-------- 55 (200)
.+++|+++|+++ |||. .|.||+.++..++..|+.+..+. ++. ..+. ....+.
T Consensus 225 ~~~~i~v~G~~~~~H~~~--~g~~a~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~ 302 (485)
T 3dlj_A 225 SYFMVEVKCRDQDFHSGT--FGGILHEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSS 302 (485)
T ss_dssp EEEEEEEESCSSCEETTT--STTSSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHH
T ss_pred EEEEEEEEECCCCCcCCC--CCccccCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhc
Confidence 578999999999 9997 36666666666666665531110 000 0000 000000
Q ss_pred ------------------CCceEeeeEEecCC----CccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Q 029000 56 ------------------TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINE 109 (200)
Q Consensus 56 ------------------~~~t~~~g~i~~gg----~~~NviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~ 109 (200)
...++++|.|+ +| ++.|+||++|++.+|+|+.+.++.+++.++|+++++..+.
T Consensus 303 g~~~~~~~~~~~~~~~~~~~~~~~v~~i~-gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~ 377 (485)
T 3dlj_A 303 RVEKFLFDTKEEILMHLWRYPSLSIHGIE-GAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFS 377 (485)
T ss_dssp TCSCCSCSSHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCcccccchHHHHHHHhcCCceEEEEEe-cCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhcc
Confidence 14679999999 77 8999999999999999999999999999999999988754
No 23
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.39 E-value=2.7e-13 Score=119.18 Aligned_cols=67 Identities=19% Similarity=0.239 Sum_probs=58.3
Q ss_pred eEEEEEEee-ecCCcCCC-CCC-CCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCe
Q 029000 2 IPWKLHVTG-KLFHSGLP-HKA-INPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGE 78 (200)
Q Consensus 2 ~~~~I~v~G-~~gHas~P-~~g-~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~ 78 (200)
.+++|+++| +++||+.| +.| .||+..+++++.+|+.. . ...++++|.|+ +|.+.|+||++
T Consensus 202 ~~~~i~v~G~~~~Hsg~~~~~g~~nAi~~~~~~i~~l~~~--~--------------~~~~~~v~~i~-gG~~~NvIP~~ 264 (487)
T 2qyv_A 202 HCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQN--Q--------------PHFDFTLANIR-GGSIRNAIPRE 264 (487)
T ss_dssp EEEEEEEECCCCCBTTTTTTSCCCCHHHHHHHHHHHHHHH--C--------------TTCCEEEEEEE-EESCTTBCCCC
T ss_pred eEEEEEEEccCCccCCcccccCCCCHHHHHHHHHHHHhhc--c--------------CCCcEEEEEEe-CCCcCcccCCc
Confidence 468999999 89999987 776 79999999999999874 1 12468899999 88999999999
Q ss_pred EEEEEEE
Q 029000 79 CTVSGDV 85 (200)
Q Consensus 79 a~~~~di 85 (200)
|++.+++
T Consensus 265 a~~~~~~ 271 (487)
T 2qyv_A 265 SVATLVF 271 (487)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999999
No 24
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.36 E-value=3.1e-13 Score=116.41 Aligned_cols=148 Identities=10% Similarity=-0.006 Sum_probs=99.2
Q ss_pred eEEEEEEeeecCCcC-CCCCCCCHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCeEE
Q 029000 2 IPWKLHVTGKLFHSG-LPHKAINPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGECT 80 (200)
Q Consensus 2 ~~~~I~v~G~~gHas-~P~~g~NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~a~ 80 (200)
.+++|+++|+++|++ .|+.|+||+..+++++.+|+........ .....++++|.++ +| |++|+
T Consensus 211 ~~~~i~~~G~~~Hs~~~p~~g~nAi~~~a~~i~~l~~~~~~~~~---------~~~~~~~~v~~i~-gG------p~~a~ 274 (417)
T 1fno_A 211 ASVNIKIVGNNVHPGTAKGVMVNALSLAARIHAEVPADEAPETT---------EGYEGFYHLASMK-GT------VDRAE 274 (417)
T ss_dssp EEEEEEEECBCCCGGGCTTTCBCHHHHHHHHHHTSCTTSSGGGC---------CTTCCEEEEEEEE-EC------SSEEE
T ss_pred eeEEEEEEeeccCCCCCccccCCHHHHHHHHHHhhhccCCcccc---------cccccEEEEEEEe-ec------cCeEE
Confidence 578999999999999 6999999999999999988764211100 0123578889888 55 99999
Q ss_pred EEEEEeCCCCCCHHHHHHHHHHHHHHHhhc------cc-ccccccCcc-cccCCCccccccc-------eee-ecCCCCc
Q 029000 81 VSGDVRLTPFYNVTDVMKRLQEYVDDINEN------IE-KLDTRGPVS-KYVLPDENIRGRH-------VLS-LHYLTLG 144 (200)
Q Consensus 81 ~~~diR~~~~~~~e~i~~~i~~~~~~~~~~------v~-~~~~~~~~~-~~~~~d~~l~~~~-------~~~-~~~~~~~ 144 (200)
+.+|+|+++.++.+++.++|++++++.+.. ++ ++....++. ..+++|+++...+ ... ......|
T Consensus 275 ~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~g 354 (417)
T 1fno_A 275 MHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILDIAQQAMRDCHITPEMKPIRG 354 (417)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHHHHHHTTTCCTTCCEEEEEEEEECCCHHHHHTSTHHHHHHHHHHHHTTCCCBCCCBSS
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEEeccccchhccccCCCHHHHHHHHHHHHcCCCceecccee
Confidence 999999999999999999999999886432 22 111110111 1234566543211 111 1123467
Q ss_pred ccccccccccccccccccccee
Q 029000 145 RDDFRIFPLRWQRHKIKFGRLK 166 (200)
Q Consensus 145 ~eDf~~~~~~~~~~~~~fG~~~ 166 (200)
++|+++|... ....+.|||+.
T Consensus 355 gtD~~~~~~~-gip~v~~G~~~ 375 (417)
T 1fno_A 355 GTDGAQLSFM-GLPCPNLFTGG 375 (417)
T ss_dssp CCHHHHHTTT-TCCCCEECCSE
T ss_pred ccchHhHHhc-CCCEEEEcCCC
Confidence 8999999763 12244577753
No 25
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.35 E-value=6.9e-13 Score=116.91 Aligned_cols=81 Identities=22% Similarity=0.210 Sum_probs=64.1
Q ss_pred eEEEEEEee-ecCCcCC-CCCCC-CHHHHHHHHHHHHhHhhcccCCCCCCCccCCCCCCceEeeeEEecCCCccceeCCe
Q 029000 2 IPWKLHVTG-KLFHSGL-PHKAI-NPLELAMEALKVIQTRFYKDFPPHPKEQVYGFETPSTMKPTQWSYPGGGINQIPGE 78 (200)
Q Consensus 2 ~~~~I~v~G-~~gHas~-P~~g~-NAi~~aa~~l~~l~~~~~~~~~~~~~~~~~~~~~~~t~~~g~i~~gg~~~NviP~~ 78 (200)
.+++|+++| ++|||+. |+.|+ ||+..+++++..|++. .+++++.|+ ||.+.|+||++
T Consensus 206 ~~~~i~v~G~~~gHs~~~p~~g~~nai~~~~~~l~~l~~~-------------------~~~~v~~i~-gG~~~NvIP~~ 265 (490)
T 3mru_A 206 ITRQLTLKGLKGGHSGCDIHTGRGNANKLIGRFLAGHAQE-------------------LDLRLVEFR-GGSLRNAIPRE 265 (490)
T ss_dssp EEEEEEEECCCCEETTTSSSSCCCCHHHHHHHHHHHHTTT-------------------TTCEEEEEE-ECSCTTEECCC
T ss_pred eEEEEEEECCCCcccccccccCCcCHHHHHHHHHHHHHhc-------------------CcEEEEEEE-CCCCCcccCCc
Confidence 578999999 9999995 99999 9999999999987641 246789999 89999999999
Q ss_pred EEEEEEEeCCCCCCHHHHHHHHHH
Q 029000 79 CTVSGDVRLTPFYNVTDVMKRLQE 102 (200)
Q Consensus 79 a~~~~diR~~~~~~~e~i~~~i~~ 102 (200)
|++.+++|..+.+..+++.+++.+
T Consensus 266 a~~~~~iR~~~~~~~~~~~~~~~~ 289 (490)
T 3mru_A 266 AFVTVALPAENQDKLAELFNYYTE 289 (490)
T ss_dssp EEEEEEEEGGGHHHHHHHHHHHHH
T ss_pred cEEEEEECcccHHHHHHHHHHHHH
Confidence 999988886654444444443333
No 26
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.25 E-value=4.4e-12 Score=110.71 Aligned_cols=147 Identities=11% Similarity=0.051 Sum_probs=93.0
Q ss_pred EEEEEEeeecCCcCCCCCCCCHHHHHHHHHHHHh------Hhh---cccCCCCCCCcc------CCCCCCceEeeeEEec
Q 029000 3 PWKLHVTGKLFHSGLPHKAINPLELAMEALKVIQ------TRF---YKDFPPHPKEQV------YGFETPSTMKPTQWSY 67 (200)
Q Consensus 3 ~~~I~v~G~~gHas~P~~g~NAi~~aa~~l~~l~------~~~---~~~~~~~~~~~~------~~~~~~~t~~~g~i~~ 67 (200)
+++|+++|+++|+|.|+.|+||+.++++++.+++ ++. .+.+........ .......++++|.+
T Consensus 258 ~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~t~~~g~i-- 335 (470)
T 1lfw_A 258 SADIVLIGQGAHASAPQVGKNSATFLALFLDQYAFAGRDKNFLHFLAEVEHEDFYGKKLGIFHHDDLMGDLASSPSMF-- 335 (470)
T ss_dssp EEEEEEECBCCBTTCGGGSBCHHHHHHHHHTTSCBCHHHHHHHHHHHHTTTTCTTSTTTTCCCEETTTEECEEEEEEE--
T ss_pred cEEEEEeecccCCCCCccCccHHHHHHHHHHhCCCcchhHHHHHHHHHhcCCCCcccccCCcccccccccceEEEEEE--
Confidence 7899999999999999999999999999998875 211 111110000000 00011234555554
Q ss_pred CCCccceeCCe-EEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhcccccccccCcccccCCCccccccc----eeeecC--
Q 029000 68 PGGGINQIPGE-CTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRH----VLSLHY-- 140 (200)
Q Consensus 68 gg~~~NviP~~-a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~~l~~~~----~~~~~~-- 140 (200)
|.+|++ |++.+|+|+++.++.+++.++++++++. +.+++.. ...++..+++|+++...+ ...++.
T Consensus 336 -----~~~p~~~a~~~~diR~~~~~~~~~i~~~i~~~~~~-g~~v~~~--~~~~~~~~~~d~~l~~~~~~a~~~~~g~~~ 407 (470)
T 1lfw_A 336 -----DYEHAGKASLLNNVRYPQGTDPDTMIKQVLDKFSG-ILDVTYN--GFEEPHYVPGSDPMVQTLLKVYEKQTGKPG 407 (470)
T ss_dssp -----EEETTSCEEEEEEEEECTTCCHHHHHHHHHHHHTT-TEEEECS--CCBCCEECCTTCHHHHHHHHHHHHHHCCCC
T ss_pred -----EEcCCceEEEEEEEecCCCCCHHHHHHHHHHHhcC-CeEEEEE--eCCCceeeCCCCHHHHHHHHHHHHHcCCCC
Confidence 457999 9999999999999999999999999876 4344321 112233455676643222 111111
Q ss_pred ---CCCccccccccccccccccccccc
Q 029000 141 ---LTLGRDDFRIFPLRWQRHKIKFGR 164 (200)
Q Consensus 141 ---~~~~~eDf~~~~~~~~~~~~~fG~ 164 (200)
...|+.|++++. .++.|||
T Consensus 408 ~~~~~~g~~d~~~~~-----~~v~~G~ 429 (470)
T 1lfw_A 408 HEVVIGGGTYGRLFE-----RGVAFGA 429 (470)
T ss_dssp CEEEESSCCGGGGST-----TCEECCE
T ss_pred ceeeecCHhHHHhCC-----CeEEECC
Confidence 123678888874 3577886
No 27
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.24 E-value=2.6e-12 Score=112.45 Aligned_cols=104 Identities=15% Similarity=0.094 Sum_probs=79.0
Q ss_pred eEEEEEEeeec--CCcCCCCCCCCHHHHHHHHHHHHhHhhcccC----CCC------------------CCCc-----cC
Q 029000 2 IPWKLHVTGKL--FHSGLPHKAINPLELAMEALKVIQTRFYKDF----PPH------------------PKEQ-----VY 52 (200)
Q Consensus 2 ~~~~I~v~G~~--gHas~P~~g~NAi~~aa~~l~~l~~~~~~~~----~~~------------------~~~~-----~~ 52 (200)
.+++|+++|++ +|||.| |.||+..+++++..|+.+..+.. +.. +..+ ..
T Consensus 218 ~~~~i~v~G~~~~~Hs~~~--g~~ai~~~~~~i~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (479)
T 2zog_A 218 CYFFIEVECSDKDLHSGVY--GGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDV 295 (479)
T ss_dssp EEEEEEEECCSSCEEHHHH--TTTSCCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHH
T ss_pred EEEEEEEEeCCCCCccCCC--CCCccCHHHHHHHHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhc
Confidence 57899999999 999986 88999999999999876421100 000 0000 00
Q ss_pred CC-----------C----CCceEeeeEEecCC----CccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Q 029000 53 GF-----------E----TPSTMKPTQWSYPG----GGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDIN 108 (200)
Q Consensus 53 ~~-----------~----~~~t~~~g~i~~gg----~~~NviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~ 108 (200)
+. . ...+++++.|+ +| ++.|+||++|++.+|+|+.++++.+++.+++++.+++.+
T Consensus 296 g~~~~~~~~~~~~~~~~~~~~~~~v~~i~-gg~~g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~ 369 (479)
T 2zog_A 296 GAETLLHSCKKDILMHRWRYPSLSLHGIE-GAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKF 369 (479)
T ss_dssp TCSSCSCSSHHHHHHHHHTSCEEEEEEEE-SSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred CCccccccchHHHHHHhhcCCCeEEeeee-cCCcCCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhh
Confidence 00 0 13678999999 66 799999999999999999999999999999999998764
No 28
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=63.67 E-value=11 Score=23.91 Aligned_cols=34 Identities=9% Similarity=0.170 Sum_probs=28.6
Q ss_pred CeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhc
Q 029000 77 GECTVSGDVRLTPFYNVTDVMKRLQEYVDDINEN 110 (200)
Q Consensus 77 ~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~ 110 (200)
|--++.+|+|...+...+...+++++.+...+..
T Consensus 15 dgqeieidirvstgkeleralqelekalaragar 48 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALARAGAR 48 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHHHTCS
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHhcccc
Confidence 3357899999999999999999999988877654
No 29
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=35.41 E-value=22 Score=30.26 Aligned_cols=99 Identities=9% Similarity=-0.073 Sum_probs=62.3
Q ss_pred ceEeeeEEecCCCccceeCCeEEEEEEEeCCCCCCHHHHHHHHHHHHHHHhhcccccccccCcccccCCCccccccc---
Q 029000 58 STMKPTQWSYPGGGINQIPGECTVSGDVRLTPFYNVTDVMKRLQEYVDDINENIEKLDTRGPVSKYVLPDENIRGRH--- 134 (200)
Q Consensus 58 ~t~~~g~i~~gg~~~NviP~~a~~~~diR~~~~~~~e~i~~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~~l~~~~--- 134 (200)
++.++|.++ ...+++.+.+++|++.....+.+.+.+++.++..+.+++... ..++...++|+++...+
T Consensus 346 ~s~nl~~~~-------~~~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~~p~~~~~~d~~l~~~~~~~ 416 (487)
T 2qyv_A 346 TSLSIGVLK-------TEDNFVRSTMLVRSLIESGKSYVASLLKSLASLAQGNINLSG--DYPGWEPQSHSDILDLTKTI 416 (487)
T ss_dssp EEEEEEEEE-------ECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTCEEEEEE--EECCBCCCSCCHHHHHHHHH
T ss_pred eccceEEEE-------EcCCeEEEEEEccCCCHHHHHHHHHHHHHHHHHcCceEEECC--CCCCCCCCCCCHHHHHHHHH
Confidence 556666666 334678999999999998889999999888877666654221 12223444566543222
Q ss_pred -eeeec-----CCCCccccccccccccc-cccccccce
Q 029000 135 -VLSLH-----YLTLGRDDFRIFPLRWQ-RHKIKFGRL 165 (200)
Q Consensus 135 -~~~~~-----~~~~~~eDf~~~~~~~~-~~~~~fG~~ 165 (200)
...++ ....|++|+++|...++ ...+.|||.
T Consensus 417 ~~~~~G~~~~~~~~~gg~D~~~~~~~~pg~~~v~~Gp~ 454 (487)
T 2qyv_A 417 YAQVLGTDPEIKVIHAGLECGLLKKIYPTIDMVSIGPT 454 (487)
T ss_dssp HHHHHSSCCEEEEESSCCTHHHHHHHCTTSEEEECCCC
T ss_pred HHHHhCCCCeEEEEeccccHHHHHhhCCCCCEEEECCC
Confidence 11111 13467899999987643 124678874
No 30
>1jy2_P Fibrinogen gamma-B chain; fragment E, disulfide bonds, asymmetry, coiled- coil, beta-sheet, blood clotting; 1.40A {Bos taurus} SCOP: h.1.8.1 PDB: 1jy3_P 2a45_I*
Probab=24.77 E-value=86 Score=17.99 Aligned_cols=24 Identities=21% Similarity=0.313 Sum_probs=19.8
Q ss_pred eeHHHHHHHHHHHhhHHHHHHHHH
Q 029000 171 LSIYKFISNLFSVLNKSLAAVISR 194 (200)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~ 194 (200)
-||-+|+++-.+-.+|.|...=+-
T Consensus 23 CGiadfL~~Yq~~vd~dL~~lE~~ 46 (48)
T 1jy2_P 23 CGIADFLNNYQTSVDKDLRTLEGI 46 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHhcccccchhhHHHHHHHH
Confidence 499999999999999988765443
Done!